Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.a #22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.a #22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.a #22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.a #22 Amniota ANCESTRAL SPECIES 24 ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000178841 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00950000182832.D.b Mammalia ANCESTRAL SPECIES 44 ENSGT00940000153304.A ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000178841 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000158335 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b Theria ANCESTRAL SPECIES 33 ENSGT00940000158987 ENSGT00940000153304.A ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000158335 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 Eutheria ANCESTRAL SPECIES 16 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b Chiroptera ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.a #22 Megabat MODERN SPECIES 2779 ENSPVAG00000000287 #22 Equus ANCESTRAL SPECIES 27 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00510000046985.h.b.a.a.b ENSGT00940000163888.c.a ENSGT00940000153773.a.a.b ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000163888.c.b ENSGT00940000163888.d ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00940000171348 ENSGT00950000183107.a.b.b ENSGT00390000015252.z ENSGT00940000162488 Horse DUPLICATION Horse DUPLICATION Horse DUPLICATION Horse MODERN SPECIES 434 ENSECAG00000039175 ENSECAG00000040261 ENSECAG00000034767 ENSECAG00000029252 ENSECAG00000059076 #22 ENSECAG00000035601 Horse MODERN SPECIES 383 ENSECAG00000031307 ENSECAG00000036460 ENSECAG00000039538 #22 ENSECAG00000034708 ENSECAG00000036624 Horse MODERN SPECIES 437 ENSECAG00000029211 #22 ENSECAG00000039548 Horse MODERN SPECIES 480 ENSECAG00000035882 ENSECAG00000001370 ENSECAG00000003102 ENSECAG00000033999 ENSECAG00000038200 ENSECAG00000053318 ENSECAG00000057912 ENSECAG00000056775 KLHL4 (ENSECAG00000002157) ENSECAG00000004018 DACH2 (ENSECAG00000023997) CHM (ENSECAG00000019201) POF1B (ENSECAG00000013592) ZNF711 (ENSECAG00000012161) ENSECAG00000033045 ENSECAG00000026966 #22 APOOL (ENSECAG00000009229) ENSECAG00000035131 ENSECAG00000007854 ENSECAG00000036171 HDX (ENSECAG00000024862) RPS6KA6 (ENSECAG00000019431) CYLC1 (ENSECAG00000019066) POU3F4 (ENSECAG00000002519) ENSECAG00000058100 ENSECAG00000038924 ENSECAG00000047832 ENSECAG00000002165 SH3BGRL (ENSECAG00000012612) ENSECAG00000033394 ENSECAG00000054141 Donkey MODERN SPECIES 36 ENSEASG00005028494 ENSEASG00005025105 ENSEASG00005008384 ENSEASG00005025341 ENSEASG00005034414 ENSEASG00005014126 ENSEASG00005014352 ENSEASG00005013651 ENSEASG00005019161 ENSEASG00005002489 ENSEASG00005029848 CHM (ENSEASG00005002132) POF1B (ENSEASG00005011111) ZNF711 (ENSEASG00005029213) ENSEASG00005033831 ENSEASG00005011122 #22 APOOL (ENSEASG00005011125) ENSEASG00005036812 ENSEASG00005034949 ENSEASG00005033871 HDX (ENSEASG00005027565) RPS6KA6 (ENSEASG00005029386) CYLC1 (ENSEASG00005017371) POU3F4 (ENSEASG00005005148) ENSEASG00005035953 ENSEASG00005033419 ENSEASG00005010782 SH3BGRL (ENSEASG00005032697) ENSEASG00005030462 BRWD3 (ENSEASG00005012247) ENSEASG00005007773 Carnivora ANCESTRAL SPECIES 11 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00530000065541 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.a Caniformia ANCESTRAL SPECIES 22 ENSGT00940000159092.d ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b Canidae ANCESTRAL SPECIES 59 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00950000185197 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b Canis_lupus ANCESTRAL SPECIES 44 ENSGT00700000104637 ENSGT00730000111592 ENSGT00950000185318 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00940000154191.i.a.l.a.b ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.e ENSGT00950000185197 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b ENSGT00940000153288.a.b.a.b Dingo MODERN SPECIES 347 ENSCAFG00020008379 ENSCAFG00020008403 ENSCAFG00020008407 NAP1L3 (ENSCAFG00020008423) ENSCAFG00020008456 ENSCAFG00020008461 ENSCAFG00020008484 KLHL4 (ENSCAFG00020008498) DACH2 (ENSCAFG00020008532) ENSCAFG00020008549 ENSCAFG00020008551 CHM (ENSCAFG00020008573) POF1B (ENSCAFG00020008592) ZNF711 (ENSCAFG00020008733) ENSCAFG00020008757 ENSCAFG00020008761 #22 APOOL (ENSCAFG00020008777) ENSCAFG00020008797 ENSCAFG00020008810 HDX (ENSCAFG00020008813) ENSCAFG00020008822 RPS6KA6 (ENSCAFG00020008851) CYLC1 (ENSCAFG00020009204) POU3F4 (ENSCAFG00020009214) Dog MODERN SPECIES 144 ENSCAFG00845026333 ENSCAFG00845026288 ENSCAFG00845026229 FAM133A (ENSCAFG00845026207) ENSCAFG00845026042 PABPC5 (ENSCAFG00845026000) ENSCAFG00845025970 KLHL4 (ENSCAFG00845025779) ENSCAFG00845025670 ENSCAFG00845025538 DACH2 (ENSCAFG00845025244) CHM (ENSCAFG00845024883) POF1B (ENSCAFG00845024223) ZNF711 (ENSCAFG00845023911) ENSCAFG00845023827 ENSCAFG00845023778 #22 APOOL (ENSCAFG00845023656) ENSCAFG00845023591 ENSCAFG00845023552 RPS6KA6 (ENSCAFG00845022907) CYLC1 (ENSCAFG00845022676) POU3F4 (ENSCAFG00845022645) ENSCAFG00845022569 ENSCAFG00845022468 ENSCAFG00845022429 SH3BGRL (ENSCAFG00845022327) ENSCAFG00845022233 BRWD3 (ENSCAFG00845021308) TENT5D (ENSCAFG00845021138) GPR174 (ENSCAFG00845021116) P2RY10 (ENSCAFG00845021084) Red fox MODERN SPECIES 128 ENSVVUG00000013175 PABPC5 (ENSVVUG00000013172) ENSVVUG00000013157 CPXCR1 (ENSVVUG00000013152) KLHL4 (ENSVVUG00000012072) ENSVVUG00000012028 ENSVVUG00000012023 ENSVVUG00000012017 ENSVVUG00000012014 CHM (ENSVVUG00000011968) POF1B (ENSVVUG00000011479) ZNF711 (ENSVVUG00000011419) ENSVVUG00000011403 #22 APOOL (ENSVVUG00000011396) ENSVVUG00000011330 ENSVVUG00000011312 HDX (ENSVVUG00000011303) ENSVVUG00000011287 RPS6KA6 (ENSVVUG00000011245) CYLC1 (ENSVVUG00000011222) POU3F4 (ENSVVUG00000011203) ENSVVUG00000011155 ENSVVUG00000011148 ENSVVUG00000011123 SH3BGRL (ENSVVUG00000011096) Caniformia_b ANCESTRAL SPECIES 24 ENSGT00940000157822 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b Ursidae ANCESTRAL SPECIES 47 ENSGT00390000009320.fb.b ENSGT00940000157822 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00390000017515.o.a.n ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000160311 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b.e.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.a ENSGT01100000263536.A.a.a.b Ursus ANCESTRAL SPECIES 203 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b.e.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.a American black bear MODERN SPECIES 482 POF1B (ENSUAMG00000017599) ZNF711 (ENSUAMG00000017600) ENSUAMG00000017601 #22 APOOL (ENSUAMG00000017603) Polar bear MODERN SPECIES 224 DACH2 (ENSUMAG00000023901) CHM (ENSUMAG00000023882) POF1B (ENSUMAG00000023875) ZNF711 (ENSUMAG00000023873) ENSUMAG00000023871 #22 APOOL (ENSUMAG00000023869) ENSUMAG00000023865 HDX (ENSUMAG00000023864) ENSUMAG00000023863 CYLC1 (ENSUMAG00000023861) POU3F4 (ENSUMAG00000023858) ENSUMAG00000023857 ENSUMAG00000023853 ENSUMAG00000023847 SH3BGRL (ENSUMAG00000023846) ENSUMAG00000023844 BRWD3 (ENSUMAG00000023646) TENT5D (ENSUMAG00000023620) ENSUMAG00000023617 TBX22 (ENSUMAG00000023615) Giant Panda MODERN SPECIES 2288 NAP1L3 (ENSAMEG00000019124) ENSAMEG00000019505 ENSAMEG00000019756 ENSAMEG00000015196 PABPC5 (ENSAMEG00000020114) ENSAMEG00000029029 CPXCR1 (ENSAMEG00000003724) ENSAMEG00000004819 ENSAMEG00000019391 KLHL4 (ENSAMEG00000004825) DACH2 (ENSAMEG00000000232) ENSAMEG00000018811 CHM (ENSAMEG00000010190) POF1B (ENSAMEG00000013055) ZNF711 (ENSAMEG00000013076) ENSAMEG00000000814 #22 APOOL (ENSAMEG00000000829) ENSAMEG00000019387 HDX (ENSAMEG00000000875) RPS6KA6 (ENSAMEG00000003648) CYLC1 (ENSAMEG00000002561) POU3F4 (ENSAMEG00000019562) SH3BGRL (ENSAMEG00000027788) HMGN5 (ENSAMEG00000030368) BRWD3 (ENSAMEG00000008691) TENT5D (ENSAMEG00000018974) ITM2A (ENSAMEG00000006587) GPR174 (ENSAMEG00000020171) P2RY10 (ENSAMEG00000020169) LPAR4 (ENSAMEG00000020009) ENSAMEG00000024348 Mustelinae ANCESTRAL SPECIES 201 ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.h ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b American mink MODERN SPECIES 420 POF1B (ENSNVIG00000024562) ZNF711 (ENSNVIG00000024561) ENSNVIG00000024556 #22 ENSNVIG00000024552 ENSNVIG00000024550 HDX (ENSNVIG00000024548) ENSNVIG00000024546 RPS6KA6 (ENSNVIG00000024545) CYLC1 (ENSNVIG00000024543) Ferret MODERN SPECIES 489 POF1B (ENSMPUG00000001951) ZNF711 (ENSMPUG00000001939) ENSMPUG00000001915 #22 ENSMPUG00000001899 ENSMPUG00000001894 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00910000147624 ENSGT00940000166006 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b Suina ANCESTRAL SPECIES 7 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000165291.w ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b Chacoan peccary MODERN SPECIES 13 ENSCWAG00000013876 PABPC5 (ENSCWAG00000013807) ENSCWAG00000013796 ENSCWAG00000013765 ENSCWAG00000013735 ENSCWAG00000013703 ENSCWAG00000013663 KLHL4 (ENSCWAG00000013421) DACH2 (ENSCWAG00000012445) CHM (ENSCWAG00000012359) ENSCWAG00000012326 ENSCWAG00000012315 POF1B (ENSCWAG00000011995) ZNF711 (ENSCWAG00000011798) ENSCWAG00000011729 ENSCWAG00000011702 #22 APOOL (ENSCWAG00000011560) ENSCWAG00000011465 Pig MODERN SPECIES 300 ENSSSCG00000051742 PABPC5 (ENSSSCG00000040194) ENSSSCG00000041020 ENSSSCG00000061974 ENSSSCG00000051391 ENSSSCG00000012469 KLHL4 (ENSSSCG00000012467) ENSSSCG00000036557 ENSSSCG00000041269 ENSSSCG00000040198 DACH2 (ENSSSCG00000036515) CHM (ENSSSCG00000012463) POF1B (ENSSSCG00000012462) ZNF711 (ENSSSCG00000021601) ENSSSCG00000023546 ENSSSCG00000038238 #22 APOOL (ENSSSCG00000012459) ENSSSCG00000044442 HDX (ENSSSCG00000038744) RPS6KA6 (ENSSSCG00000012456) CYLC1 (ENSSSCG00000012455) POU3F4 (ENSSSCG00000012454) ENSSSCG00000040430 ENSSSCG00000031731 ENSSSCG00000012452 ENSSSCG00000032946 ENSSSCG00000038944 BRWD3 (ENSSSCG00000025156) TENT5D (ENSSSCG00000012450) TBX22 (ENSSSCG00000012449) ITM2A (ENSSSCG00000012448) Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00910000147624 ENSGT00940000166006 ENSGT00940000157822 ENSGT00530000065541 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b Camelidae ANCESTRAL SPECIES 43 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000166006 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b Arabian camel MODERN SPECIES 204 ENSCDRG00005021404 ENSCDRG00005021402 ENSCDRG00005021401 ENSCDRG00005021397 ENSCDRG00005021393 ENSCDRG00005021391 ENSCDRG00005021388 ENSCDRG00005021383 ENSCDRG00005021374 KLHL4 (ENSCDRG00005021364) DACH2 (ENSCDRG00005021299) CHM (ENSCDRG00005021282) POF1B (ENSCDRG00005021270) ZNF711 (ENSCDRG00005021254) ENSCDRG00005021249 ENSCDRG00005021246 #22 APOOL (ENSCDRG00005021240) ENSCDRG00005021233 HDX (ENSCDRG00005021225) ENSCDRG00005021222 RPS6KA6 (ENSCDRG00005021214) CYLC1 (ENSCDRG00005021207) POU3F4 (ENSCDRG00005021206) ENSCDRG00005021204 ENSCDRG00005021199 ENSCDRG00005021194 SH3BGRL (ENSCDRG00005021189) ENSCDRG00005021186 BRWD3 (ENSCDRG00005021171) TENT5D (ENSCDRG00005021162) ENSCDRG00005021154 Alpaca MODERN SPECIES 1245 POF1B (ENSVPAG00000010161) ZNF711 (ENSVPAG00000010160) ENSVPAG00000010159 #22 APOOL (ENSVPAG00000010158) Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00940000159162 ENSGT00910000147624 ENSGT00940000157822 ENSGT00530000065541 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b Pecora ANCESTRAL SPECIES 27 ENSGT00940000159092.d ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000164266 ENSGT00940000157822 ENSGT00530000065541 ENSGT00940000158335 ENSGT00940000163888 ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D Percora_a ANCESTRAL SPECIES 22 ENSGT00940000159149 ENSGT00940000159092.d ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000164266 ENSGT00940000157822 ENSGT00530000065541 ENSGT00940000158335 ENSGT00940000163888 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b Bovidae ANCESTRAL SPECIES 23 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b Bovinae ANCESTRAL SPECIES 38 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00390000015224.c.a.a.b.f.a.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b Bos ANCESTRAL SPECIES 30 ENSGT00950000183232 ENSGT00510000047493 ENSGT00940000159922.b ENSGT00390000018248 ENSGT01060000248594.e.a ENSGT00990000203589.a.b.a.b ENSGT00940000159055 ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 ENSGT00950000183097.a.a.a ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT01030000235010.e.a ENSGT00940000159242 ENSGT00920000150804 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00390000015224.c.a.a.b.f.a.b Bos_a ANCESTRAL SPECIES 19 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.b ENSGT00390000013518 ENSGT00940000161558 ENSGT00940000159055 ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 ENSGT00950000183097.a.a.a ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT01030000235010.e.a ENSGT00940000159242 ENSGT00920000150804 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00390000015224.c.a.a.a.t.a.b.a.a Wild yak MODERN SPECIES 1725 ENSBMUG00000001836 POF1B (ENSBMUG00000001826) ZNF711 (ENSBMUG00000001796) ENSBMUG00000001757 #22 APOOL (ENSBMUG00000001723) Domestic yak MODERN SPECIES 69 TRPC5 (ENSBGRG00000023665) TRPC5OS (ENSBGRG00000023756) ENSBGRG00000023774 LHFPL1 (ENSBGRG00000023789) AMOT (ENSBGRG00000023864) HTR2C (ENSBGRG00000024094) IL13RA2 (ENSBGRG00000024134) LRCH2 (ENSBGRG00000024233) ENSBGRG00000024443 PLS3 (ENSBGRG00000024473) DACH2 (ENSBGRG00000024724) CHM (ENSBGRG00000024881) POF1B (ENSBGRG00000025068) ZNF711 (ENSBGRG00000025171) APOOL (ENSBGRG00000025225) ENSBGRG00000025291 #22 ENSBGRG00000025313 HDX (ENSBGRG00000025367) ENSBGRG00000025377 RPS6KA6 (ENSBGRG00000012307) CYLC1 (ENSBGRG00000013173) POU3F4 (ENSBGRG00000013340) ENSBGRG00000013359 ENSBGRG00000013400 ENSBGRG00000013446 SH3BGRL (ENSBGRG00000013469) ENSBGRG00000013533 BRWD3 (ENSBGRG00000013595) TENT5D (ENSBGRG00000014080) TBX22 (ENSBGRG00000014109) ENSBGRG00000014224 Bos_b ANCESTRAL SPECIES 31 ENSGT00390000018248 ENSGT01060000248594.e.a ENSGT00990000203589.a.b.a.b ENSGT00940000159055 ENSGT00940000153201.j.u.i.b ENSGT01050000244937.a.b.a ENSGT00890000139472.h.a.b ENSGT00390000005057.h.b.b ENSGT00940000159971 ENSGT00940000160039 ENSGT00950000183097.a.a.a ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT01030000235010.e.a ENSGT00940000159242 ENSGT00920000150804 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00390000015224.c.a.a.a.t.a.b.a.a Hybrid Bos Indicus MODERN SPECIES 315 HTR2C (ENSBIXG00005021329) ENSBIXG00005007160 ENSBIXG00005005873 ENSBIXG00005021395 IL13RA2 (ENSBIXG00005007068) LRCH2 (ENSBIXG00005021533) ENSBIXG00005021585 PLS3 (ENSBIXG00005003665) ENSBIXG00005007070 DACH2 (ENSBIXG00005003727) ENSBIXG00005022091 CHM (ENSBIXG00005022182) ENSBIXG00005022230 POF1B (ENSBIXG00005022276) ZNF711 (ENSBIXG00005003824) ENSBIXG00005022499 #22 APOOL (ENSBIXG00005022564) ENSBIXG00005022647 HDX (ENSBIXG00005022875) ENSBIXG00005022936 ENSBIXG00005005756 ENSBIXG00005022974 ENSBIXG00005022982 RPS6KA6 (ENSBIXG00005004019) ENSBIXG00005023627 CYLC1 (ENSBIXG00005023648) POU3F4 (ENSBIXG00005023708) ENSBIXG00005004073 SH3BGRL (ENSBIXG00005023836) HMGN5 (ENSBIXG00005023866) BRWD3 (ENSBIXG00005023949) Cow MODERN SPECIES 177 ENSBTAG00000050670 HTR2C (ENSBTAG00000054073) ENSBTAG00000055095 ENSBTAG00000053214 ENSBTAG00000046327 IL13RA2 (ENSBTAG00000020022) LRCH2 (ENSBTAG00000050382) ENSBTAG00000046463 PLS3 (ENSBTAG00000011613) ENSBTAG00000049980 DACH2 (ENSBTAG00000044037) CHM (ENSBTAG00000009598) ENSBTAG00000046941 POF1B (ENSBTAG00000014485) ZNF711 (ENSBTAG00000002668) ENSBTAG00000013077 #22 APOOL (ENSBTAG00000021790) ENSBTAG00000027867 HDX (ENSBTAG00000051806) ENSBTAG00000055024 RPS6KA6 (ENSBTAG00000002015) ENSBTAG00000048589 CYLC1 (ENSBTAG00000047417) POU3F4 (ENSBTAG00000015712) ENSBTAG00000039066 ENSBTAG00000051658 ENSBTAG00000048206 SH3BGRL (ENSBTAG00000010587) ENSBTAG00000049971 HMGN5 (ENSBTAG00000001877) ENSBTAG00000051240 Caprinae ANCESTRAL SPECIES 53 ENSGT00950000183068.a.a ENSGT00390000000360.r.d.b ENSGT00390000006885.a ENSGT00390000012647 ENSGT00940000154783.f ENSGT00390000016992.s ENSGT00940000160294 ENSGT00390000005685 ENSGT00940000158744 ENSGT00510000047092 ENSGT00940000159803 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 Goat MODERN SPECIES 21 ENSCHIG00000024534 ENSCHIG00000014505 PAG-3 (ENSCHIG00000026711) PAG-6 (ENSCHIG00000021195) ENSCHIG00000021106 PAG-5 (ENSCHIG00000015114) ENSCHIG00000026284 ENSCHIG00000023342 ENSCHIG00000012664 ENSCHIG00000017923 PAG12 (ENSCHIG00000024809) ENSCHIG00000014362 PAG-4 (ENSCHIG00000021200) PAG-11 (ENSCHIG00000003791) ENSCHIG00000015011 ENSCHIG00000021031 #22 APOOL (ENSCHIG00000009190) ENSCHIG00000015641 PAG-2 (ENSCHIG00000020849) ENSCHIG00000011963 ENSCHIG00000007600 ENSCHIG00000016744 PAG-8 (ENSCHIG00000024659) ENSCHIG00000016267 VWCE (ENSCHIG00000025655) DDB1 (ENSCHIG00000014969) TKFC (ENSCHIG00000022752) CYB561A3 (ENSCHIG00000012169) TMEM138 (ENSCHIG00000017453) TMEM216 (ENSCHIG00000023674) CPSF7 (ENSCHIG00000014655) Rambouillet Sheep MODERN SPECIES 205 FUNDC2 (ENSOARG00020017001) ENSOARG00020016962 F8 (ENSOARG00020015985) SMIM9 (ENSOARG00020015879) MPP1 (ENSOARG00020015726) DKC1 (ENSOARG00020015553) GAB3 (ENSOARG00020015493) ENSOARG00020022631 ENSOARG00020022613 ENSOARG00020022607 ENSOARG00020022547 DACH2 (ENSOARG00020021981) CHM (ENSOARG00020021776) POF1B (ENSOARG00020021532) ZNF711 (ENSOARG00020021464) ENSOARG00020021396 #22 APOOL (ENSOARG00020021301) ENSOARG00020021215 ENSOARG00020021167 ENSOARG00020021130 ENSOARG00020021109 HDX (ENSOARG00020021028) RPS6KA6 (ENSOARG00020020348) CYLC1 (ENSOARG00020020266) CCDC179 (ENSOARG00020020216) SVIP (ENSOARG00020020165) GAS2 (ENSOARG00020020094) FANCF (ENSOARG00020020073) SLC17A6 (ENSOARG00020019981) ANO5 (ENSOARG00020019783) POU3F4 (ENSOARG00020019751) Siberian musk deer MODERN SPECIES 9 ENSMMSG00000008613 ENSMMSG00000009216 PABPC5 (ENSMMSG00000009243) ENSMMSG00000009265 ENSMMSG00000009313 ENSMMSG00000009352 ENSMMSG00000009361 KLHL4 (ENSMMSG00000009371) DACH2 (ENSMMSG00000009445) CHM (ENSMMSG00000009948) ENSMMSG00000010099 ENSMMSG00000010127 ENSMMSG00000010293 POF1B (ENSMMSG00000010335) ZNF711 (ENSMMSG00000010430) ENSMMSG00000010476 #22 APOOL (ENSMMSG00000010528) ENSMMSG00000010593 HDX (ENSMMSG00000010697) ENSMMSG00000010779 ENSMMSG00000010807 RPS6KA6 (ENSMMSG00000010835) CYLC1 (ENSMMSG00000010990) POU3F4 (ENSMMSG00000011014) ENSMMSG00000011025 ENSMMSG00000011053 SH3BGRL (ENSMMSG00000011080) HMGN5 (ENSMMSG00000000002) BRWD3 (ENSMMSG00000000027) ENSMMSG00000000165 TENT5D (ENSMMSG00000000196) Cetacea ANCESTRAL SPECIES 19 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00910000147624 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.a.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.a Odontoceti ANCESTRAL SPECIES 19 ENSGT00940000159162 ENSGT00910000147624 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00950000183000.c.a.a.i.a.a.b.a.a ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.a.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.a Odontoceti_a ANCESTRAL SPECIES 28 ENSGT00940000159162 ENSGT00910000147624 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00950000183000.c.a.a.i.a.a.b.a.a ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.a.a ENSGT00390000008591 ENSGT00390000005534.b.b.d ENSGT00940000159242 ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.a Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00510000047537.u.a ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00390000000334 ENSGT00940000162927 ENSGT00950000183000.c.a.a.i.a.a.b.a.a ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.a.a ENSGT00390000008591 ENSGT00390000005534.b.b.d ENSGT00940000159242 ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00390000002517.a.a.c.b ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00430000032886 ENSGT00730000111097.e ENSGT00390000000334 ENSGT00940000162927 ENSGT00950000183000.c.a.a.i.a.a.b.a.a ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.a.a ENSGT00390000008591 ENSGT00390000005534.b.b.d ENSGT00940000159242 ENSGT00940000161429 ENSGT01010000229653 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D Narwhal MODERN SPECIES 309 FAM133A (ENSMMNG00015010151) ENSMMNG00015010144 NAP1L3 (ENSMMNG00015010132) ENSMMNG00015010123 ENSMMNG00015010114 ENSMMNG00015010095 ENSMMNG00015010023 PABPC5 (ENSMMNG00015009976) KLHL4 (ENSMMNG00015009956) DACH2 (ENSMMNG00015009862) CHM (ENSMMNG00015009797) ENSMMNG00015009775 POF1B (ENSMMNG00015009745) ZNF711 (ENSMMNG00015009729) ENSMMNG00015009720 ENSMMNG00015009712 #22 ENSMMNG00015009704 ENSMMNG00015009686 HDX (ENSMMNG00015009669) ENSMMNG00015009659 RPS6KA6 (ENSMMNG00015009638) ENSMMNG00015009625 ENSMMNG00015009619 ENSMMNG00015009610 SH3BGRL (ENSMMNG00015009604) ENSMMNG00015009599 HMGN5 (ENSMMNG00015009591) ENSMMNG00015009582 ENSMMNG00015009579 ENSMMNG00015009577 BRWD3 (ENSMMNG00015009554) Vaquita MODERN SPECIES 34 FAM133A (ENSPSNG00000018066) ENSPSNG00000018050 NAP1L3 (ENSPSNG00000018038) ENSPSNG00000018006 CFL1 (ENSPSNG00000017983) ENSPSNG00000017610 PABPC5 (ENSPSNG00000017503) ENSPSNG00000017474 KLHL4 (ENSPSNG00000017273) DACH2 (ENSPSNG00000016658) CHM (ENSPSNG00000016502) ENSPSNG00000016452 POF1B (ENSPSNG00000016065) ZNF711 (ENSPSNG00000015952) ENSPSNG00000015761 ENSPSNG00000015676 #22 APOOL (ENSPSNG00000015621) HDX (ENSPSNG00000015468) RPS6KA6 (ENSPSNG00000014893) POU3F4 (ENSPSNG00000014834) ENSPSNG00000014813 SH3BGRL (ENSPSNG00000014759) ENSPSNG00000014737 ENSPSNG00000014508 ENSPSNG00000014459 BRWD3 (ENSPSNG00000014395) TENT5D (ENSPSNG00000014369) TBX22 (ENSPSNG00000014253) ITM2A (ENSPSNG00000014072) GPR174 (ENSPSNG00000014042) ENSPSNG00000013978 Sperm whale MODERN SPECIES 13 ENSPCTG00005004579 FAM133A (ENSPCTG00005019776) NAP1L3 (ENSPCTG00005019741) ENSPCTG00005019726 PCDH11X (ENSPCTG00005019408) PABPC5 (ENSPCTG00005019361) ENSPCTG00005019336 ENSPCTG00005019306 ENSPCTG00005019271 KLHL4 (ENSPCTG00005019112) DACH2 (ENSPCTG00005018538) CHM (ENSPCTG00005018395) ENSPCTG00005018358 ZNF711 (ENSPCTG00005018257) ENSPCTG00005018213 ENSPCTG00005018126 #22 APOOL (ENSPCTG00005018097) ENSPCTG00005018057 ENSPCTG00005018003 HDX (ENSPCTG00005017842) RPS6KA6 (ENSPCTG00005017401) POU3F4 (ENSPCTG00005017365) ENSPCTG00005017351 ENSPCTG00005017342 ENSPCTG00005017278 SH3BGRL (ENSPCTG00005017239) ENSPCTG00005017210 HMGN5 (ENSPCTG00005017184) BRWD3 (ENSPCTG00005016926) TENT5D (ENSPCTG00005016891) ENSPCTG00005016832 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.a #22 Hedgehog MODERN SPECIES 7651 ENSEEUG00000005911 #22 Common shrew MODERN SPECIES 6002 ENSSARG00000009069 #22 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 Glires ANCESTRAL SPECIES 10 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 Lagomorpha ANCESTRAL SPECIES 95 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00520000059318 ENSGT00530000063666.a ENSGT00940000163888 ENSGT00530000067269 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b Rabbit MODERN SPECIES 1401 ENSOCUG00000001978 ENSOCUG00000032103 ENSOCUG00000014565 ENSOCUG00000005772 ENSOCUG00000035409 ENSOCUG00000032789 ENSOCUG00000029146 ENSOCUG00000001826 ENSOCUG00000023763 DACH2 (ENSOCUG00000004513) CHM (ENSOCUG00000012819) ENSOCUG00000036844 ENSOCUG00000025426 POF1B (ENSOCUG00000008812) ZNF711 (ENSOCUG00000023926) ENSOCUG00000010085 #22 ENSOCUG00000034512 APOOL (ENSOCUG00000003369) ENSOCUG00000031808 ENSOCUG00000027774 HDX (ENSOCUG00000000903) ENSOCUG00000006428 CYLC1 (ENSOCUG00000005157) POU3F4 (ENSOCUG00000010927) ENSOCUG00000021892 ENSOCUG00000005222 ENSOCUG00000029757 ENSOCUG00000027690 ENSOCUG00000025499 ENSOCUG00000028103 SH3BGRL (ENSOCUG00000014035) Rodentia ANCESTRAL SPECIES 10 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d Rodentia_B ANCESTRAL SPECIES 16 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00950000185117 ENSGT00940000166733 Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00950000185117 ENSGT00940000161206 Muroidea ANCESTRAL SPECIES 13 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000003732 ENSGT00940000163848 ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000003732 ENSGT00940000163848 ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 Cricetidae ANCESTRAL SPECIES 8 ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00390000005717.f ENSGT00900000141059.y.a.b ENSGT00900000141059.y.a.a ENSGT00900000141059.y.b ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00950000182962.b.b.a ENSGT00940000162488 Cricetinae ANCESTRAL SPECIES 17 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT01030000235438 ENSGT00940000161429 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00950000182962.b.b.a ENSGT00940000162488 Golden Hamster MODERN SPECIES 758 Klhl4 (ENSMAUG00000014371) ENSMAUG00000016494 Dach2 (ENSMAUG00000010782) Chm (ENSMAUG00000017065) ENSMAUG00000016526 Pof1b (ENSMAUG00000012853) Zfp711 (ENSMAUG00000012277) 2010106E10Rik (ENSMAUG00000012995) Satl1 (ENSMAUG00000016111) #22 Apool (ENSMAUG00000014048) 4933403O08Rik (ENSMAUG00000009376) ENSMAUG00000016626 Tex16 (ENSMAUG00000006556) ENSMAUG00000018096 Hdx (ENSMAUG00000000922) Rps6ka6 (ENSMAUG00000001357) ENSMAUG00000007023 Pou3f4 (ENSMAUG00000016709) ENSMAUG00000010933 ENSMAUG00000008750 Sh3bgrl (ENSMAUG00000000433) Brwd3 (ENSMAUG00000012244) ENSMAUG00000011241 ENSMAUG00000013651 Chinese hamster chok1gshd MODERN SPECIES 16 ENSCGRG00001023968 Diaph2 (ENSCGRG00001018454) ENSCGRG00001009434 ENSCGRG00001006460 ENSCGRG00001003703 ENSCGRG00001010570 ENSCGRG00001004881 Klhl4 (ENSCGRG00001016767) ENSCGRG00001006882 Dach2 (ENSCGRG00001023530) Tpm3-rs7 (ENSCGRG00001006979) Chm (ENSCGRG00001006793) Pof1b (ENSCGRG00001015632) Zfp711 (ENSCGRG00001010150) 2010106E10Rik (ENSCGRG00001018464) ENSCGRG00001000138 #22 ENSCGRG00001000206 4933403O08Rik (ENSCGRG00001018687) ENSCGRG00001007339 Tex16 (ENSCGRG00001020189) Hdx (ENSCGRG00001001736) Rps6ka6 (ENSCGRG00001019587) Cylc1 (ENSCGRG00001014177) ENSCGRG00001016928 Pou3f4 (ENSCGRG00001011962) ENSCGRG00001024450 Gm6377 (ENSCGRG00001012169) ENSCGRG00001011016 Sh3bgrl (ENSCGRG00001000603) Hmgn5 (ENSCGRG00001013973) Brwd3 (ENSCGRG00001016099) Cricetidae_B ANCESTRAL SPECIES 47 ENSGT00900000141059.y.a.b ENSGT00900000141059.y.a.a ENSGT00900000141059.y.b ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00950000182962.b.b.a ENSGT00940000162488 Prairie vole MODERN SPECIES 96 ENSMOCG00000013238 ENSMOCG00000014742 Klhl4 (ENSMOCG00000008772) Dach2 (ENSMOCG00000011776) Chm (ENSMOCG00000020359) ENSMOCG00000015094 ENSMOCG00000000578 Pof1b (ENSMOCG00000014928) Zfp711 (ENSMOCG00000003046) 2010106E10Rik (ENSMOCG00000017647) Satl1 (ENSMOCG00000003777) #22 Apool (ENSMOCG00000019380) 4933403O08Rik (ENSMOCG00000010080) Tex16 (ENSMOCG00000016239) ENSMOCG00000012225 Hdx (ENSMOCG00000016956) Rps6ka6 (ENSMOCG00000000070) Cylc1 (ENSMOCG00000002144) Pou3f4 (ENSMOCG00000001063) ENSMOCG00000001887 Sh3bgrl (ENSMOCG00000002612) ENSMOCG00000001614 Brwd3 (ENSMOCG00000018113) ENSMOCG00000004335 Chmp1b2 (ENSMOCG00000010933) Tbx22 (ENSMOCG00000001712) Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000023744 ENSPEMG00000014414 ENSPEMG00000024456 ENSPEMG00000014179 ENSPEMG00000025979 Cpxcr1 (ENSPEMG00000026829) ENSPEMG00000029835 Klhl4 (ENSPEMG00000019669) Gm773 (ENSPEMG00000019841) Dach2 (ENSPEMG00000011157) ENSPEMG00000025540 Chm (ENSPEMG00000019556) Pof1b (ENSPEMG00000023660) Zfp711 (ENSPEMG00000028793) 2010106E10Rik (ENSPEMG00000015852) ENSPEMG00000026639 #22 Apool (ENSPEMG00000024018) ENSPEMG00000022787 4933403O08Rik (ENSPEMG00000025473) Hdx (ENSPEMG00000011250) Rps6ka6 (ENSPEMG00000015736) Cylc1 (ENSPEMG00000017301) Pou3f4 (ENSPEMG00000003663) ENSPEMG00000025843 Gm6377 (ENSPEMG00000023246) ENSPEMG00000024318 Sh3bgrl (ENSPEMG00000027781) Brwd3 (ENSPEMG00000022305) ENSPEMG00000031328 Wmp (ENSPEMG00000027638) Tent5d (ENSPEMG00000031184) Murinae ANCESTRAL SPECIES 14 ENSGT00390000005717.f.a ENSGT00900000141059.y.a.b ENSGT00900000141059.y.a.a ENSGT00900000141059.y.b ENSGT00940000156016.e ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000003732 ENSGT00940000163848 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000017581.a ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b Mus ANCESTRAL SPECIES 9 ENSGT00900000141059.y.a.a ENSGT00940000156016.e ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00950000182962.b.b.a ENSGT00940000162488 ENSGT00950000182832.D.b Mus_A ANCESTRAL SPECIES 15 ENSGT00940000156016.e ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000163020 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888.e ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00950000182962.b.b.a ENSGT00940000162488 ENSGT00950000182832.D.b Ryukyu mouse MODERN SPECIES 19 MGP_CAROLIEiJ_G0033370 MGP_CAROLIEiJ_G0033369 Pcdh11x (MGP_CAROLIEiJ_G0033368) Pabpc5 (MGP_CAROLIEiJ_G0033367) MGP_CAROLIEiJ_G0033366 MGP_CAROLIEiJ_G0033365 Cpxcr1 (MGP_CAROLIEiJ_G0033364) MGP_CAROLIEiJ_G0033363 MGP_CAROLIEiJ_G0033362 Klhl4 (MGP_CAROLIEiJ_G0033361) Dach2 (MGP_CAROLIEiJ_G0033360) Chm (MGP_CAROLIEiJ_G0033359) Pof1b (MGP_CAROLIEiJ_G0033358) Zfp711 (MGP_CAROLIEiJ_G0033357) 2010106E10Rik (MGP_CAROLIEiJ_G0033356) Satl1 (MGP_CAROLIEiJ_G0033355) #22 Apool (MGP_CAROLIEiJ_G0033354) 4933403O08Rik (MGP_CAROLIEiJ_G0033353) MGP_CAROLIEiJ_G0033352 Hdx (MGP_CAROLIEiJ_G0033351) Rps6ka6 (MGP_CAROLIEiJ_G0033350) Cylc1 (MGP_CAROLIEiJ_G0033349) Pou3f4 (MGP_CAROLIEiJ_G0033348) Gm6377 (MGP_CAROLIEiJ_G0033347) Sh3bgrl (MGP_CAROLIEiJ_G0033346) MGP_CAROLIEiJ_G0033345 Brwd3 (MGP_CAROLIEiJ_G0033344) MGP_CAROLIEiJ_G0033343 Wmp (MGP_CAROLIEiJ_G0033342) Tent5d (MGP_CAROLIEiJ_G0033341) Chmp1b2 (MGP_CAROLIEiJ_G0033340) Mus_B ANCESTRAL SPECIES 14 ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000163020.p ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000163020.o ENSGT00390000003732 ENSGT00940000163888.e ENSGT00940000163888.f ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00950000182962.b.b.a ENSGT00940000162488 ENSGT00950000182832.D.b Mouse MODERN SPECIES 37 Pcdh11x (ENSMUSG00000034755) Pabpc5 (ENSMUSG00000034732) Tgif2lx1 (ENSMUSG00000100133) Tgif2lx2 (ENSMUSG00000100194) H2ab1 (ENSMUSG00000067441) H2ab2 (ENSMUSG00000082482) Cpxcr1 (ENSMUSG00000072995) Ube2dnl2 (ENSMUSG00000047079) Ube2dnl1 (ENSMUSG00000050435) Klhl4 (ENSMUSG00000025597) Dach2 (ENSMUSG00000025592) Chm (ENSMUSG00000025531) Pof1b (ENSMUSG00000034607) Zfp711 (ENSMUSG00000025529) 2010106E10Rik (ENSMUSG00000025528) Satl1 (ENSMUSG00000025527) #22 Apool (ENSMUSG00000025525) 4933403O08Rik (ENSMUSG00000079460) Tex16 (ENSMUSG00000034555) Gm45194 (ENSMUSG00000109156) Hdx (ENSMUSG00000034551) Rps6ka6 (ENSMUSG00000025665) Cylc1 (ENSMUSG00000073001) Pou3f4 (ENSMUSG00000056854) Gm6377 (ENSMUSG00000048621) Sh3bgrl (ENSMUSG00000031246) Hmgn5 (ENSMUSG00000031245) Brwd3 (ENSMUSG00000063663) Wmp (ENSMUSG00000073006) Tent5d (ENSMUSG00000073007) Chmp1b2 (ENSMUSG00000031242) Mus_C ANCESTRAL SPECIES 22 ENSGT00900000141059.y.a.b ENSGT00900000141059.y.a.a ENSGT00940000156016.e ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163020.o ENSGT00940000163888.e ENSGT00940000163888.f ENSGT00940000159818 ENSGT00390000001134.b ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00950000182962.b.b.a ENSGT00940000162488 ENSGT00950000182832.D.b Steppe mouse MODERN SPECIES 1681 ENSMSIG00000016918 #22 ENSMSIG00000016943 spretus MODERN SPECIES 19 MGP_SPRETEiJ_G0034536 Nap1l3 (MGP_SPRETEiJ_G0034535) Pcdh11x (MGP_SPRETEiJ_G0034534) Pabpc5 (MGP_SPRETEiJ_G0034533) MGP_SPRETEiJ_G0034532 Cpxcr1 (MGP_SPRETEiJ_G0034531) MGP_SPRETEiJ_G0034530 Ube2dnl2 (MGP_SPRETEiJ_G0034529) Ube2dnl1 (MGP_SPRETEiJ_G0034528) Klhl4 (MGP_SPRETEiJ_G0034527) Dach2 (MGP_SPRETEiJ_G0034526) Chm (MGP_SPRETEiJ_G0034525) Pof1b (MGP_SPRETEiJ_G0034524) Zfp711 (MGP_SPRETEiJ_G0034523) 2010106E10Rik (MGP_SPRETEiJ_G0034522) Satl1 (MGP_SPRETEiJ_G0034521) #22 Apool (MGP_SPRETEiJ_G0034520) 4933403O08Rik (MGP_SPRETEiJ_G0034519) Hdx (MGP_SPRETEiJ_G0034517) MGP_SPRETEiJ_G0034516 Rps6ka6 (MGP_SPRETEiJ_G0034515) MGP_SPRETEiJ_G0034514 Cylc1 (MGP_SPRETEiJ_G0034513) Pou3f4 (MGP_SPRETEiJ_G0034512) Gm6377 (MGP_SPRETEiJ_G0034511) Sh3bgrl (MGP_SPRETEiJ_G0034510) MGP_SPRETEiJ_G0034509 MGP_SPRETEiJ_G0034508 MGP_SPRETEiJ_G0034507 MGP_SPRETEiJ_G0034506 Tent5d (MGP_SPRETEiJ_G0034505) Shrew mouse MODERN SPECIES 23 Nap1l3 (MGP_PahariEiJ_G0031910) Pcdh11x (MGP_PahariEiJ_G0031909) Pabpc5 (MGP_PahariEiJ_G0031908) MGP_PahariEiJ_G0031907 Cpxcr1 (MGP_PahariEiJ_G0031906) MGP_PahariEiJ_G0031905 MGP_PahariEiJ_G0031904 MGP_PahariEiJ_G0031903 MGP_PahariEiJ_G0031902 Klhl4 (MGP_PahariEiJ_G0031901) Dach2 (MGP_PahariEiJ_G0031900) Chm (MGP_PahariEiJ_G0031899) Pof1b (MGP_PahariEiJ_G0031898) Zfp711 (MGP_PahariEiJ_G0031897) 2010106E10Rik (MGP_PahariEiJ_G0031896) Satl1 (MGP_PahariEiJ_G0031895) #22 Apool (MGP_PahariEiJ_G0031894) 4933403O08Rik (MGP_PahariEiJ_G0031893) MGP_PahariEiJ_G0031892 Hdx (MGP_PahariEiJ_G0031891) Rps6ka6 (MGP_PahariEiJ_G0031890) MGP_PahariEiJ_G0031889 Pou3f4 (MGP_PahariEiJ_G0031888) MGP_PahariEiJ_G0031887 MGP_PahariEiJ_G0031885 MGP_PahariEiJ_G0031886 MGP_PahariEiJ_G0031884 Gm6377 (MGP_PahariEiJ_G0031883) Sh3bgrl (MGP_PahariEiJ_G0031882) Hmgn5 (MGP_PahariEiJ_G0031881) Brwd3 (MGP_PahariEiJ_G0031880) Rat MODERN SPECIES 46 ENSRNOG00000063657 ENSRNOG00000064387 ENSRNOG00000070967 H2ab3 (ENSRNOG00000029736) AABR07039936.1 (ENSRNOG00000037770) M6pr-ps1 (ENSRNOG00000069568) LOC120099227 (ENSRNOG00000029497) RGD1561582 (ENSRNOG00000065209) Klhl4 (ENSRNOG00000005215) Dach2 (ENSRNOG00000004869) Chm (ENSRNOG00000000161) ENSRNOG00000064035 Pof1b (ENSRNOG00000004795) Zfp711 (ENSRNOG00000022391) RGD1561958 (ENSRNOG00000022411) Satl1 (ENSRNOG00000022476) #22 Apool (ENSRNOG00000004512) 4933403O08Rik (ENSRNOG00000042394) Ube2d4l1 (ENSRNOG00000065297) LOC100363993 (ENSRNOG00000067650) Hdx (ENSRNOG00000037799) Rps6ka6 (ENSRNOG00000002592) Cylc1 (ENSRNOG00000056740) Ankra2 (ENSRNOG00000016622) Pou3f4 (ENSRNOG00000002784) LOC102554937 (ENSRNOG00000068802) LOC681325 (ENSRNOG00000023005) RGD1562039 (ENSRNOG00000030519) Sh3bgrl (ENSRNOG00000069303) Hmgn5 (ENSRNOG00000029078) Brwd3 (ENSRNOG00000002291) Rodentia_A ANCESTRAL SPECIES 9 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b Sciuridae ANCESTRAL SPECIES 35 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000154426.b.a ENSGT00430000032886 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000163888.n ENSGT00390000003732 ENSGT00940000163848 ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b Marmotini ANCESTRAL SPECIES 78 ENSGT00390000007539.i.b.b ENSGT00940000155762.ac ENSGT00940000155193.a.a.f ENSGT00940000162932 ENSGT00950000183164.E ENSGT00950000183164.B.h ENSGT00940000153412.A.v ENSGT00950000183164.D ENSGT00950000183164.C ENSGT00940000153412.C.c ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888.m ENSGT00940000163888.n ENSGT00390000002792.cb ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b Marmotini_b ANCESTRAL SPECIES 121 ENSGT00940000155762.ac ENSGT00940000155193.a.a.f ENSGT00940000162932 ENSGT00950000183164.E ENSGT00950000183164.B.h ENSGT00940000153412.A.v ENSGT00950000183164.D ENSGT00950000183164.C.g ENSGT00940000153412.C.c ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000163888.n ENSGT00390000002792.cb ENSGT01000000216433 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00390000015930.e.b ENSGT00940000162488 Arctic ground squirrel MODERN SPECIES 573 POF1B (ENSUPAG00010017330) ZNF711 (ENSUPAG00010017349) ENSUPAG00010017385 ENSUPAG00010017399 #22 APOOL (ENSUPAG00010017412) ENSUPAG00010017453 ENSUPAG00010017459 Alpin marmot MODERN SPECIES 78 ENSMMMG00000010671 ENSMMMG00000010680 ENSMMMG00000010684 NXF3 (ENSMMMG00000010686) ENSMMMG00000010721 ENSMMMG00000010744 BEX4 (ENSMMMG00000010757) ENSMMMG00000010766 ENSMMMG00000010770 TCEAL7 (ENSMMMG00000010775) BEX3 (ENSMMMG00000010779) DACH2 (ENSMMMG00000010801) CHM (ENSMMMG00000010964) POF1B (ENSMMMG00000011075) ENSMMMG00000011100 ENSMMMG00000011112 #22 APOOL (ENSMMMG00000011126) ENSMMMG00000011171 HDX (ENSMMMG00000011191) RPS6KA6 (ENSMMMG00000011222) CYLC1 (ENSMMMG00000011257) ENSMMMG00000011302 ENSMMMG00000011315 ENSMMMG00000011323 SH3BGRL (ENSMMMG00000011328) ENSMMMG00000011334 ENSMMMG00000011351 TENT5D (ENSMMMG00000011385) ENSMMMG00000011394 TBX22 (ENSMMMG00000011419) ENSMMMG00000011488 Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005023114 ENSSVLG00005023139 ENSSVLG00005023178 ENSSVLG00005023244 ENSSVLG00005023265 CPXCR1 (ENSSVLG00005023282) ENSSVLG00005023291 ENSSVLG00005023323 ENSSVLG00005023341 KLHL4 (ENSSVLG00005023401) DACH2 (ENSSVLG00005023583) ENSSVLG00005023891 POF1B (ENSSVLG00005023983) ZNF711 (ENSSVLG00005024106) ENSSVLG00005024140 ENSSVLG00005024204 #22 APOOL (ENSSVLG00005024251) ENSSVLG00005024287 ENSSVLG00005024295 ENSSVLG00005024315 HDX (ENSSVLG00005024346) RPS6KA6 (ENSSVLG00005024442) CYLC1 (ENSSVLG00005024602) POU3F4 (ENSSVLG00005024640) ENSSVLG00005024677 ENSSVLG00005010323 ENSSVLG00005010356 ENSSVLG00005010369 SH3BGRL (ENSSVLG00005010419) ENSSVLG00005010444 BRWD3 (ENSSVLG00005010574) Primates ANCESTRAL SPECIES 19 ENSGT01050000248440 ENSGT00940000157822 ENSGT00530000065541 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D Haplorrhini ANCESTRAL SPECIES 18 ENSGT00940000159162 ENSGT00910000147624 ENSGT01050000248440 ENSGT00940000157822 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000159162 ENSGT00910000147624 ENSGT01050000248440 ENSGT00940000157822 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b Catarrhini ANCESTRAL SPECIES 12 ENSGT00940000159162 ENSGT00940000153239.B.i.a.b ENSGT00940000157822 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000154977.l.b ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b Hominoidea ANCESTRAL SPECIES 16 ENSGT00940000157822 ENSGT00940000163054 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000154977.l.b ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000165353 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b Hominidae ANCESTRAL SPECIES 8 ENSGT00940000157822 ENSGT00940000163054 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000154977.l.b ENSGT00940000163848.c ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b ENSGT00940000163808 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000163054 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335.c ENSGT00940000162668 ENSGT00940000153284.a.h.i.b ENSGT00940000154977.l.b.a ENSGT00940000163848.c ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000153314.b ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00940000162927 ENSGT00940000158335.c ENSGT00940000162668 ENSGT00940000154977.l.b.b ENSGT00940000165485 ENSGT00940000153284.a.h.i.b ENSGT00940000154977.l.b.a ENSGT00940000163848.c ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000153314.b ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b Pan ANCESTRAL SPECIES 6 ENSGT00940000155206.d.b ENSGT00940000153889.e.a.a ENSGT00950000182869.e.a.b.sb.b.a.a.b.b ENSGT00940000158335.c ENSGT00940000162668 ENSGT00940000154977.l.b.b ENSGT00940000165485 ENSGT00390000003732 ENSGT00950000183119.a.e.a.d.a.a ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000153314.b ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000182869.e.a.b.sb.b.a.a.a ENSGT00950000183107.a.b.b ENSGT00950000182787.C.d ENSGT00940000162350.b.a ENSGT00940000162350.b.b ENSGT00940000162488 ENSGT00940000161206 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 972 NAP1L3 (ENSPTRG00000022080) ENSPTRG00000043794 ENSPTRG00000043870 ENSPTRG00000022079 PABPC5 (ENSPTRG00000022078) ENSPTRG00000045302 ENSPTRG00000044589 CPXCR1 (ENSPTRG00000022076) ENSPTRG00000049218 KLHL4 (ENSPTRG00000022075) DACH2 (ENSPTRG00000022073) ENSPTRG00000052049 CHM (ENSPTRG00000022071) POF1B (ENSPTRG00000022070) ZNF711 (ENSPTRG00000022069) ENSPTRG00000022068 #22 ENSPTRG00000043670 APOOL (ENSPTRG00000022067) ENSPTRG00000048780 HDX (ENSPTRG00000022065) RPS6KA6 (ENSPTRG00000022064) CYLC1 (ENSPTRG00000022063) POU3F4 (ENSPTRG00000040705) ENSPTRG00000047666 SH3BGRL (ENSPTRG00000022061) HMGN5 (ENSPTRG00000022527) ENSPTRG00000048534 BRWD3 (ENSPTRG00000022060) ENSPTRG00000045129 ENSPTRG00000046735 ENSPTRG00000047256 Chimpanzee MODERN SPECIES 221 ENSPTRG00000047505 #22 ENSPTRG00000043859 ENSPTRG00000050970 Bonobo MODERN SPECIES 369 ENSPPAG00000040878 ENSPPAG00000030962 ENSPPAG00000043443 PABPC5 (ENSPPAG00000007378) ENSPPAG00000041507 ENSPPAG00000038346 CPXCR1 (ENSPPAG00000016441) ENSPPAG00000026574 KLHL4 (ENSPPAG00000043431) ENSPPAG00000036042 ENSPPAG00000024013 CHM (ENSPPAG00000034301) ENSPPAG00000028498 POF1B (ENSPPAG00000033485) ZNF711 (ENSPPAG00000038129) ENSPPAG00000033891 #22 APOOL (ENSPPAG00000037582) HDX (ENSPPAG00000031927) RPS6KA6 (ENSPPAG00000010461) CYLC1 (ENSPPAG00000019947) ENSPPAG00000043882 POU3F4 (ENSPPAG00000017170) ENSPPAG00000040389 ENSPPAG00000037558 SH3BGRL (ENSPPAG00000035293) ENSPPAG00000037242 ENSPPAG00000037661 BRWD3 (ENSPPAG00000036225) ENSPPAG00000038929 ENSPPAG00000019114 ENSPPAG00000042789 Human MODERN SPECIES 1827 TNMD (ENSG00000000005) PCDH19 (ENSG00000165194) RPA4 (ENSG00000204086) DIAPH2 (ENSG00000147202) FAM133A (ENSG00000179083) NAP1L3 (ENSG00000186310) PCDH11X (ENSG00000102290) PABPC5 (ENSG00000174740) TGIF2LX (ENSG00000153779) CPXCR1 (ENSG00000147183) KLHL4 (ENSG00000102271) DACH2 (ENSG00000126733) CHM (ENSG00000188419) POF1B (ENSG00000124429) ZNF711 (ENSG00000147180) SATL1 (ENSG00000184788) #22 APOOL (ENSG00000155008) HDX (ENSG00000165259) RPS6KA6 (ENSG00000072133) CYLC1 (ENSG00000183035) POU3F4 (ENSG00000196767) SH3BGRL (ENSG00000131171) HMGN5 (ENSG00000198157) BRWD3 (ENSG00000165288) TENT5D (ENSG00000174016) TBX22 (ENSG00000122145) ITM2A (ENSG00000078596) GPR174 (ENSG00000147138) P2RY10 (ENSG00000078589) LPAR4 (ENSG00000147145) RTL3 (ENSG00000179300) Gorilla MODERN SPECIES 523 ENSGGOG00000039790 ENSGGOG00000025897 ENSGGOG00000042618 ENSGGOG00000008584 PABPC5 (ENSGGOG00000007622) ENSGGOG00000037634 ENSGGOG00000036979 CPXCR1 (ENSGGOG00000026865) RPSA (ENSGGOG00000036643) KLHL4 (ENSGGOG00000002307) DACH2 (ENSGGOG00000007231) ENSGGOG00000040803 CHM (ENSGGOG00000022912) POF1B (ENSGGOG00000016908) ZNF711 (ENSGGOG00000006110) SATL1 (ENSGGOG00000016333) #22 ENSGGOG00000016329 HDX (ENSGGOG00000005551) RPS6KA6 (ENSGGOG00000016474) CYLC1 (ENSGGOG00000001587) POU3F4 (ENSGGOG00000027353) ENSGGOG00000025534 SH3BGRL (ENSGGOG00000009664) HMGN5 (ENSGGOG00000016479) ENSGGOG00000039492 ENSGGOG00000037044 ENSGGOG00000039837 BRWD3 (ENSGGOG00000004108) ENSGGOG00000015916 ENSGGOG00000043041 TBX22 (ENSGGOG00000008990) Orangutan MODERN SPECIES 242 TSPAN6 (ENSPPYG00000020538) TNMD (ENSPPYG00000020537) PCDH19 (ENSPPYG00000020536) ENSPPYG00000041050 DIAPH2 (ENSPPYG00000020532) NAP1L3 (ENSPPYG00000020530) ENSPPYG00000035760 ENSPPYG00000020527 PABPC5 (ENSPPYG00000020526) TGIF2LX (ENSPPYG00000020525) KLHL4 (ENSPPYG00000020523) DACH2 (ENSPPYG00000020521) CHM (ENSPPYG00000020520) POF1B (ENSPPYG00000020519) ZNF711 (ENSPPYG00000020518) SATL1 (ENSPPYG00000020517) #22 APOOL (ENSPPYG00000020516) HDX (ENSPPYG00000020514) RPS6KA6 (ENSPPYG00000020513) CYLC1 (ENSPPYG00000020512) POU3F4 (ENSPPYG00000020510) SH3BGRL (ENSPPYG00000020509) HMGN5 (ENSPPYG00000020508) BRWD3 (ENSPPYG00000020507) TBX22 (ENSPPYG00000020504) ITM2A (ENSPPYG00000020503) GPR174 (ENSPPYG00000020502) P2RY10 (ENSPPYG00000020501) LPAR4 (ENSPPYG00000020500) CYSLTR1 (ENSPPYG00000020498) TAF9B (ENSPPYG00000020497) Gibbon MODERN SPECIES 31 ENSNLEG00000015681 #22 Cercopithecidae ANCESTRAL SPECIES 19 ENSGT00940000153239.B.i.a.b ENSGT00940000157822 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000153284.a.h.i.b ENSGT00940000154977.l.b ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.b Rhinopithecus ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.a #22 Golden snub-nosed monkey MODERN SPECIES 1248 SATL1 (ENSRROG00000032015) #22 Black snub-nosed monkey MODERN SPECIES 1426 ENSRBIG00000031028 #22 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000153239.B.i.a.b ENSGT00940000157822 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000153284.a.h.i.b ENSGT00940000154977.l.b ENSGT00940000163848 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a.a.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT00940000155351.bb.d Vervet Monkey MODERN SPECIES 203 PCDH19 (ENSCSAG00000010397) ENSCSAG00000000058 DIAPH2 (ENSCSAG00000010417) FAM133A (ENSCSAG00000000060) NAP1L3 (ENSCSAG00000000062) ENSCSAG00000010424 PABPC5 (ENSCSAG00000000065) TGIF2LX (ENSCSAG00000000068) CPXCR1 (ENSCSAG00000010435) ENSCSAG00000000071 KLHL4 (ENSCSAG00000010443) DACH2 (ENSCSAG00000010460) CHM (ENSCSAG00000010508) ENSCSAG00000010519 ZNF711 (ENSCSAG00000010527) SATL1 (ENSCSAG00000010536) #22 HDX (ENSCSAG00000010546) RPS6KA6 (ENSCSAG00000010555) CYLC1 (ENSCSAG00000010571) POU3F4 (ENSCSAG00000000074) ENSCSAG00000010588 SH3BGRL (ENSCSAG00000010614) HMGN5 (ENSCSAG00000010621) ENSCSAG00000000076 BRWD3 (ENSCSAG00000010659) ENSCSAG00000010700 TENT5D (ENSCSAG00000000078) TBX22 (ENSCSAG00000010713) ITM2A (ENSCSAG00000010721) GPR174 (ENSCSAG00000000080) ENSCSAG00000000082 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000153239.B.i.a.b ENSGT00940000157822 ENSGT00940000155683.l.a ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000153284.a.h.i.b ENSGT00940000154977.l.b ENSGT00940000163848 ENSGT00940000165485 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a.a.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00910000148056 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D Macaca ANCESTRAL SPECIES 13 ENSGT00910000146851.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000153284.a.h.i.b ENSGT00940000154977.l.b ENSGT00940000163848 ENSGT00940000165485 ENSGT00940000164980.c.a ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a.b ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00910000148056 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D Macaca_a ANCESTRAL SPECIES 11 ENSGT00940000159162 ENSGT00940000153239.B.i.a.b ENSGT00940000157822 ENSGT00910000146851.a ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000163848 ENSGT01100000263543.a.g.b.b.b.b.c.a.b.b ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183123.g.a.b.b.s.a ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a.b ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00730000111570 ENSGT00390000000153.l.b.c.b.b.s ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D Rhesus MODERN SPECIES 327 NAP1L3 (ENSMMUG00000012702) ENSMMUG00000019594 ENSMMUG00000012777 ENSMMUG00000065111 TGIF2LX (ENSMMUG00000009258) ENSMMUG00000055147 KLHL4 (ENSMMUG00000019383) ENSMMUG00000052264 DACH2 (ENSMMUG00000016777) ENSMMUG00000045262 ENSMMUG00000061274 CHM (ENSMMUG00000016776) POF1B (ENSMMUG00000013604) ZNF711 (ENSMMUG00000013603) ENSMMUG00000007887 SATL1 (ENSMMUG00000004336) #22 APOOL (ENSMMUG00000004335) ENSMMUG00000058186 HDX (ENSMMUG00000020536) RPS6KA6 (ENSMMUG00000020532) CYLC1 (ENSMMUG00000022081) POU3F4 (ENSMMUG00000003112) ENSMMUG00000051358 SH3BGRL (ENSMMUG00000001689) HMGN5 (ENSMMUG00000049618) ENSMMUG00000061397 ENSMMUG00000032410 BRWD3 (ENSMMUG00000010763) TENT5D (ENSMMUG00000043822) ENSMMUG00000063550 TBX22 (ENSMMUG00000054447) Crab-eating macaque MODERN SPECIES 175 ENSMFAG00000062587 TGIF2LX (ENSMFAG00000036400) ENSMFAG00000021300 CPXCR1 (ENSMFAG00000044441) ENSMFAG00000050078 KLHL4 (ENSMFAG00000039559) ENSMFAG00000058989 ENSMFAG00000063718 ENSMFAG00000004743 ENSMFAG00000048139 CHM (ENSMFAG00000042140) ENSMFAG00000061426 ENSMFAG00000049766 ZNF711 (ENSMFAG00000037179) ENSMFAG00000043804 SATL1 (ENSMFAG00000042054) #22 APOOL (ENSMFAG00000042547) ENSMFAG00000063039 ENSMFAG00000048579 ENSMFAG00000056508 HDX (ENSMFAG00000003281) RPS6KA6 (ENSMFAG00000045848) CYLC1 (ENSMFAG00000044830) ENSMFAG00000048140 POU3F4 (ENSMFAG00000027128) ENSMFAG00000053410 ENSMFAG00000035175 ENSMFAG00000057041 ENSMFAG00000052377 ENSMFAG00000064912 ENSMFAG00000003130 Pig-tailed macaque MODERN SPECIES 588 ENSMNEG00000039155 VEZT (ENSMNEG00000035171) METAP2 (ENSMNEG00000035522) USP44 (ENSMNEG00000041661) NTN4 (ENSMNEG00000044631) ENSMNEG00000030762 CCDC38 (ENSMNEG00000028098) AMDHD1 (ENSMNEG00000029405) HAL (ENSMNEG00000030888) LTA4H (ENSMNEG00000033752) ELK3 (ENSMNEG00000040169) CDK17 (ENSMNEG00000028105) CFAP54 (ENSMNEG00000029580) NEDD1 (ENSMNEG00000038563) ENSMNEG00000034840 SATL1 (ENSMNEG00000039957) #22 ENSMNEG00000029877 ENSMNEG00000038005 HDX (ENSMNEG00000034200) RPS6KA6 (ENSMNEG00000028869) CYLC1 (ENSMNEG00000035819) POU3F4 (ENSMNEG00000024620) ENSMNEG00000005850 Cercopithecinae_b ANCESTRAL SPECIES 34 ENSGT00940000153284.a.h.i.b ENSGT00940000154977.l.b ENSGT00940000163848 ENSGT00940000165485 ENSGT00390000003732 ENSGT00950000183119.a.e.a.d.a.a ENSGT00940000164980.c.a ENSGT00940000159818 ENSGT00390000001134.b ENSGT00960000186717.a ENSGT00940000154301.ab ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a.a.a Olive baboon MODERN SPECIES 792 HMGN5 (ENSPANG00000049626) SH3BGRL (ENSPANG00000008366) ENSPANG00000038814 ENSPANG00000045643 ENSPANG00000040118 ENSPANG00000044073 ENSPANG00000048854 ENSPANG00000049450 ENSPANG00000044225 POU3F4 (ENSPANG00000019402) ENSPANG00000040401 ENSPANG00000048271 ENSPANG00000013859 RPS6KA6 (ENSPANG00000012943) HDX (ENSPANG00000014327) SATL1 (ENSPANG00000008507) #22 ENSPANG00000012801 CHM (ENSPANG00000016326) POF1B (ENSPANG00000012903) ZNF711 (ENSPANG00000019448) DACH2 (ENSPANG00000015473) ENSPANG00000041065 KLHL4 (ENSPANG00000025093) ENSPANG00000044969 ENSPANG00000037666 PABPC5 (ENSPANG00000018282) ENSPANG00000044930 ENSPANG00000041332 ENSPANG00000010796 ENSPANG00000010668 ENSPANG00000051141 Cercopithecinae_d ANCESTRAL SPECIES 220 ENSGT00940000164980.c.a ENSGT00940000159818 ENSGT00390000001134.b ENSGT00960000186717.a ENSGT00940000154301.ab ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a.a.a Sooty mangabey MODERN SPECIES 297 ENSCATG00000036857 KLHL4 (ENSCATG00000035229) DACH2 (ENSCATG00000037223) ENSCATG00000043405 ENSCATG00000020985 CHM (ENSCATG00000032562) POF1B (ENSCATG00000041709) ZNF711 (ENSCATG00000008131) ENSCATG00000033124 SATL1 (ENSCATG00000029793) #22 ENSCATG00000033648 ENSCATG00000031868 Drill MODERN SPECIES 268 POF1B (ENSMLEG00000028168) ZNF711 (ENSMLEG00000032773) SATL1 (ENSMLEG00000005729) #22 ENSMLEG00000001181 HDX (ENSMLEG00000029576) Platyrrhini ANCESTRAL SPECIES 33 ENSGT00940000157822 ENSGT00390000017606.a.a.i.b.a.a.e.b ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000154652.f ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00390000007879.b ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a.e.b ENSGT00530000063666.a.m.a.e.a ENSGT00390000008591 ENSGT00940000159242 ENSGT01030000235438 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00940000156017 ENSGT00730000111570 ENSGT00950000183107.a.b.b ENSGT00940000155436.p ENSGT00850000133588 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D Cebidae ANCESTRAL SPECIES 88 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a.e.b Cebidae_a ANCESTRAL SPECIES 127 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000158335 ENSGT00940000154652.f ENSGT00940000162668 ENSGT00940000163848 ENSGT00390000003732 ENSGT00390000007879.b ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a.m.a.e.b Bolivian squirrel monkey MODERN SPECIES 1 ENSSBOG00000000078 #22 Capuchin MODERN SPECIES 649 POF1B (ENSCCAG00000033901) ZNF711 (ENSCCAG00000025288) ENSCCAG00000021428 #22 ENSCCAG00000023896 ENSCCAG00000026947 Tarsier MODERN SPECIES 7132 POF1B (ENSTSYG00000004129) ZNF711 (ENSTSYG00000004456) ENSTSYG00000009253 #22 Strepsirrhini ANCESTRAL SPECIES 37 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00940000171348 ENSGT00950000183107.a.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.a ENSGT01100000263536.A.a.a.b Lemuriformes ANCESTRAL SPECIES 49 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075.b ENSGT00940000161429 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017.u ENSGT00940000171348 ENSGT00940000156017.t.b ENSGT00950000183107.a.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.a.a Lemuriformes_a ANCESTRAL SPECIES 268 ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000163888 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 877 GRIK2 (ENSPSMG00000006679) ENSPSMG00000007574 #22 ASCC3 (ENSPSMG00000007873) SIM1 (ENSPSMG00000007916) MCHR2 (ENSPSMG00000007929) PRDM13 (ENSPSMG00000007940) CCNC (ENSPSMG00000008062) TSTD3 (ENSPSMG00000008114) USP45 (ENSPSMG00000008286) ENSPSMG00000008321 PNISR (ENSPSMG00000008346) COQ3 (ENSPSMG00000008396) FAXC (ENSPSMG00000008417) Greater bamboo lemur MODERN SPECIES 666 ENSPSMG00000000785 CHM (ENSPSMG00000000860) ENSPSMG00000000917 POF1B (ENSPSMG00000000966) ZNF711 (ENSPSMG00000001003) APOOL (ENSPSMG00000001045) ENSPSMG00000001086 #22 Mouse lemur MODERN SPECIES 169 ENSMICG00000035289 CPXCR1 (ENSMICG00000002763) ENSMICG00000036794 ENSMICG00000037025 NAP1L3 (ENSMICG00000001406) ENSMICG00000026541 ENSMICG00000043678 KLHL4 (ENSMICG00000017361) ENSMICG00000038744 DACH2 (ENSMICG00000001391) CHM (ENSMICG00000029091) ENSMICG00000046563 ENSMICG00000028499 POF1B (ENSMICG00000005035) ENSMICG00000005033 ENSMICG00000045126 #22 ENSMICG00000015844 HDX (ENSMICG00000027640) RPS6KA6 (ENSMICG00000006433) CYLC1 (ENSMICG00000010585) POU3F4 (ENSMICG00000017301) ENSMICG00000045268 ENSMICG00000004627 ENSMICG00000027473 ENSMICG00000029900 ENSMICG00000029775 ENSMICG00000027761 ENSMICG00000037235 ENSMICG00000041937 BRWD3 (ENSMICG00000007517) ENSMICG00000007110 Bushbaby MODERN SPECIES 301 PABPC5 (ENSOGAG00000006882) POF1B (ENSOGAG00000002774) ZNF711 (ENSOGAG00000027906) ENSOGAG00000003857 #22 HDX (ENSOGAG00000031446) RPS6KA6 (ENSOGAG00000008981) Atlantogenata ANCESTRAL SPECIES 155 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000003732 ENSGT00940000163848 ENSGT00940000158335 ENSGT00940000162927 Xenarthra ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.a #22 Sloth MODERN SPECIES 6740 ENSCHOG00000000251 #22 Afrotheria ANCESTRAL SPECIES 188 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000003732 ENSGT00940000163848 ENSGT00940000158335.b ENSGT00940000158335.a ENSGT00940000162927 Afrotheria_a ANCESTRAL SPECIES 189 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00530000067269 ENSGT00940000163888 ENSGT00390000003732 ENSGT00940000163848 ENSGT00940000158335.b ENSGT00940000158335.a ENSGT00940000162927 Elephant MODERN SPECIES 251 NAP1L3 (ENSLAFG00000016565) ENSLAFG00000027443 ENSLAFG00000027823 ENSLAFG00000003848 ENSLAFG00000031743 ENSLAFG00000026011 KLHL4 (ENSLAFG00000000845) ENSLAFG00000032279 ENSLAFG00000011463 ENSLAFG00000025694 CHM (ENSLAFG00000000523) POF1B (ENSLAFG00000009185) ZNF711 (ENSLAFG00000008864) ENSLAFG00000002972 #22 APOOL (ENSLAFG00000008844) ENSLAFG00000028905 ENSLAFG00000032687 ENSLAFG00000031687 HDX (ENSLAFG00000028655) RPS6KA6 (ENSLAFG00000007777) ENSLAFG00000027489 POU3F4 (ENSLAFG00000015688) ENSLAFG00000026530 SH3BGRL (ENSLAFG00000011746) ENSLAFG00000017956 BRWD3 (ENSLAFG00000002711) ENSLAFG00000032363 TENT5D (ENSLAFG00000027086) ENSLAFG00000026457 Tenrec MODERN SPECIES 7536 ENSETEG00000006346 #22 Marsupialia ANCESTRAL SPECIES 36 ENSGT00390000017123.b.l ENSGT00940000159818 ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00940000163653.b ENSGT00530000064086.q ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b.uc ENSGT00940000161206 ENSGT00950000183115.b.b Marsupialia_b ANCESTRAL SPECIES 32 ENSGT00950000182965.a.b.b.a.a.b.b ENSGT00940000153451.a.a.b.j ENSGT00940000158335 ENSGT00950000182965.a.b.b.a.a.b.a.b ENSGT01050000244818.d.b.a.b.a ENSGT00390000017123.b.l ENSGT00940000159818 ENSGT00950000182994.A.n.a.e ENSGT00940000157978.g ENSGT00390000000141 ENSGT00940000159611 ENSGT00940000163653.b ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00530000064086.q ENSGT00390000008591 ENSGT00940000159242 ENSGT00730000111075 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b.uc ENSGT00940000161206 Diprotodontia ANCESTRAL SPECIES 72 ENSGT00390000000141 ENSGT00940000159611 ENSGT00940000163653.b ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00530000064086.q ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b.uc ENSGT00940000161206 ENSGT00950000183115.b.b Diprotodontia_a ANCESTRAL SPECIES 69 ENSGT00950000182994.A.n.a.e ENSGT00940000157978.g ENSGT00390000000141 ENSGT00940000159611 ENSGT00940000163653.b ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00530000064086.q ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00950000183107.a.b.b ENSGT00940000162488 ENSGT00950000182832.D.b.uc ENSGT00940000161206 ENSGT00950000183115.b.b Common wonbat MODERN SPECIES 256 ENSVURG00010013176 ENSVURG00010013159 ENSVURG00010013146 POF1B (ENSVURG00010013126) ZNF711 (ENSVURG00010013096) ENSVURG00010013087 ENSVURG00010013055 #22 APOOL (ENSVURG00010013044) ENSVURG00010013030 ENSVURG00010013025 ENSVURG00010013008 HDX (ENSVURG00010012997) RPS6KA6 (ENSVURG00010012986) POU3F4 (ENSVURG00010012952) ENSVURG00010012946 ENSVURG00010012938 ENSVURG00010012935 SH3BGRL (ENSVURG00010012931) ENSVURG00010012917 BRWD3 (ENSVURG00010010949) ENSVURG00010010850 TENT5D (ENSVURG00010010847) Tasmanian devil MODERN SPECIES 21 ENSSHAG00000027152 ENSSHAG00000015276 ENSSHAG00000024178 ENSSHAG00000021578 ENSSHAG00000021389 ENSSHAG00000001527 ENSSHAG00000028295 ENSSHAG00000005855 ENSSHAG00000001778 ENSSHAG00000017908 ENSSHAG00000017568 ENSSHAG00000022574 POF1B (ENSSHAG00000017166) ZNF711 (ENSSHAG00000017110) ENSSHAG00000021606 ENSSHAG00000030190 #22 ENSSHAG00000016737 ENSSHAG00000030965 ENSSHAG00000015306 ENSSHAG00000029424 HDX (ENSSHAG00000014376) RPS6KA6 (ENSSHAG00000013276) ENSSHAG00000013212 POU3F4 (ENSSHAG00000028260) ENSSHAG00000024526 ENSSHAG00000007416 ENSSHAG00000026737 ENSSHAG00000006740 BRWD3 (ENSSHAG00000017788) TENT5D (ENSSHAG00000030992) ENSSHAG00000016903 Opossum MODERN SPECIES 627 ENSMODG00000003877 ENSMODG00000043274 ZDHHC15 (ENSMODG00000003871) UPRT (ENSMODG00000027579) ENSMODG00000037297 ENSMODG00000010130 ENSMODG00000014379 ENSMODG00000014370 ENSMODG00000049990 ENSMODG00000049021 ENSMODG00000014364 POF1B (ENSMODG00000014360) ZNF711 (ENSMODG00000014346) ENSMODG00000047591 ENSMODG00000014335 ENSMODG00000027748 #22 ENSMODG00000014330 ENSMODG00000047117 ENSMODG00000014317 HDX (ENSMODG00000014307) RPS6KA6 (ENSMODG00000014302) ENSMODG00000014280 POU3F4 (ENSMODG00000014279) ENSMODG00000039381 ENSMODG00000043366 ENSMODG00000029108 SLITRK2 (ENSMODG00000013898) ENSMODG00000025197 ENSMODG00000013901 ENSMODG00000013907 ENSMODG00000013912 Platypus MODERN SPECIES 17 SRPX2 (ENSOANG00000004207) TSPAN6 (ENSOANG00000049841) TNMD (ENSOANG00000004204) ENSOANG00000044612 PCDH19 (ENSOANG00000004203) ENSOANG00000004202 DIAPH2 (ENSOANG00000004201) ENSOANG00000008833 ENSOANG00000041968 ENSOANG00000008969 ENSOANG00000004328 CHM (ENSOANG00000007635) POF1B (ENSOANG00000039584) ZNF711 (ENSOANG00000047231) ENSOANG00000040338 ENSOANG00000007647 #22 APOOL (ENSOANG00000048854) ENSOANG00000041721 HDX (ENSOANG00000041527) RPS6KA6 (ENSOANG00000005406) POU3F4 (ENSOANG00000002241) ENSOANG00000040877 ENSOANG00000040557 BRWD3 (ENSOANG00000043415) ENSOANG00000051162 CHMP1B (ENSOANG00000022451) TBX22 (ENSOANG00000040270) ITM2A (ENSOANG00000007068) GPR174 (ENSOANG00000046748) ENSOANG00000040101 ENSOANG00000038812 Sauria ANCESTRAL SPECIES 21 ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000178841 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00950000182832.D.b Archelosauria ANCESTRAL SPECIES 24 ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000178841 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00950000182832.D.b Cryptodira ANCESTRAL SPECIES 43 ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000178841 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00950000182832.D.b Testudinoidea ANCESTRAL SPECIES 9 ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000178841 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00950000185117 ENSGT00950000185658 Testudinidae ANCESTRAL SPECIES 21 ENSGT00940000153304.A ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000178841 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00950000185117 ENSGT00950000185658 Abingdon island giant tortoise MODERN SPECIES 2518 ENSCABG00000005621 POF1B (ENSCABG00000005469) ZNF711 (ENSCABG00000005461) ENSCABG00000005457 #22 APOOL (ENSCABG00000005453) ENSCABG00000005450 ENSCABG00000004958 HDX (ENSCABG00000004931) RPS6KA6 (ENSCABG00000004922) POU3F4 (ENSCABG00000004917) Goode s thornscrub tortoise MODERN SPECIES 23 TNMD (ENSGEVG00005014386) ENSGEVG00005014455 PCDH19 (ENSGEVG00005014494) ENSGEVG00005014614 DIAPH2 (ENSGEVG00005014653) ENSGEVG00005014737 ENSGEVG00005014754 ENSGEVG00005014797 ENSGEVG00005014833 KLHL4 (ENSGEVG00005014854) DACH2 (ENSGEVG00005015077) ENSGEVG00005015185 ENSGEVG00005015222 POF1B (ENSGEVG00005015312) ZNF711 (ENSGEVG00005015654) ENSGEVG00005015707 #22 APOOL (ENSGEVG00005015811) ENSGEVG00005016049 HDX (ENSGEVG00005017426) RPS6KA6 (ENSGEVG00005017450) POU3F4 (ENSGEVG00005017506) ENSGEVG00005017520 ENSGEVG00005017550 ENSGEVG00005017599 ENSGEVG00005017613 SH3BGRL (ENSGEVG00005017624) ENSGEVG00005017639 BRWD3 (ENSGEVG00005017665) ENSGEVG00005017724 ENSGEVG00005017737 TENT5D (ENSGEVG00005017761) Emydidae ANCESTRAL SPECIES 52 ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000178841 ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT00950000185117 ENSGT00950000185658 ENSGT00940000162488 painted turtle MODERN SPECIES 17 ARR3 (ENSCPBG00000014349) ENSCPBG00000014360 P2RY4 (ENSCPBG00000014366) ENSCPBG00000014371 ENSCPBG00000014397 ENSCPBG00000014401 ENSCPBG00000014412 EDA (ENSCPBG00000014416) NALF2 (ENSCPBG00000014423) EFNB1 (ENSCPBG00000014428) DACH2 (ENSCPBG00000014444) ENSCPBG00000014450 POF1B (ENSCPBG00000014455) ZNF711 (ENSCPBG00000014458) ENSCPBG00000014460 ENSCPBG00000014466 #22 APOOL (ENSCPBG00000014469) ENSCPBG00000014473 ENSCPBG00000014474 HDX (ENSCPBG00000014476) RPS6KA6 (ENSCPBG00000014477) ENSCPBG00000014478 POU3F4 (ENSCPBG00000014480) ENSCPBG00000014482 ENSCPBG00000014484 ENSCPBG00000014485 ENSCPBG00000014486 SH3BGRL (ENSCPBG00000014487) ENSCPBG00000014488 BRWD3 (ENSCPBG00000014489) ENSCPBG00000014490 Three-toed box turtle MODERN SPECIES 61 ENSTMTG00000016182 PCDH19 (ENSTMTG00000016133) DIAPH2 (ENSTMTG00000012608) ENSTMTG00000012181 ENSTMTG00000012165 ENSTMTG00000012133 ENSTMTG00000012113 ENSTMTG00000012088 KLHL4 (ENSTMTG00000011993) DACH2 (ENSTMTG00000011929) ENSTMTG00000011889 POF1B (ENSTMTG00000011849) ZNF711 (ENSTMTG00000011815) ENSTMTG00000011790 ENSTMTG00000011776 ##22 ENSTMTG00000011769 #22 APOOL (ENSTMTG00000011730) ENSTMTG00000011701 HDX (ENSTMTG00000011687) RPS6KA6 (ENSTMTG00000003012) POU3F4 (ENSTMTG00000002563) ENSTMTG00000002553 ENSTMTG00000002532 ENSTMTG00000002524 ENSTMTG00000002522 SH3BGRL (ENSTMTG00000002519) ENSTMTG00000002514 BRWD3 (ENSTMTG00000001842) ENSTMTG00000001676 TENT5D (ENSTMTG00000001666) CHMP1B (ENSTMTG00000001657) Chinese turtle MODERN SPECIES 482 DACH2 (ENSPSIG00000007348) ENSPSIG00000007554 POF1B (ENSPSIG00000007696) ZNF711 (ENSPSIG00000003246) ENSPSIG00000003250 #22 APOOL (ENSPSIG00000003256) ENSPSIG00000003264 ENSPSIG00000001842 ENSPSIG00000001845 ENSPSIG00000003297 ENSPSIG00000003304 HDX (ENSPSIG00000003320) Lepidosauria ANCESTRAL SPECIES 41 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00950000182832.D.b Episquamata ANCESTRAL SPECIES 14 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00940000156837.w Laterata ANCESTRAL SPECIES 31 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017 ENSGT00960000189950 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00940000156837.w ENSGT00950000182832.D.b Common wall lizard MODERN SPECIES 419 TMLHE (ENSPMRG00000020417) SPRY3 (ENSPMRG00000020410) ENSPMRG00000020405 ENSPMRG00000020402 ENSPMRG00000020394 VAMP7 (ENSPMRG00000020384) ENSPMRG00000020370 ENSPMRG00000020358 NSDHL (ENSPMRG00000020350) ENSPMRG00000020340 DACH2 (ENSPMRG00000020308) ENSPMRG00000020265 POF1B (ENSPMRG00000020241) ZNF711 (ENSPMRG00000020229) ENSPMRG00000020215 ENSPMRG00000020196 #22 APOOL (ENSPMRG00000020173) ENSPMRG00000020137 HDX (ENSPMRG00000020114) ENSPMRG00000020105 RPS6KA6 (ENSPMRG00000019568) POU3F4 (ENSPMRG00000019451) ENSPMRG00000019446 ENSPMRG00000019435 ENSPMRG00000019426 ENSPMRG00000019420 ENSPMRG00000019416 ENSPMRG00000019404 SH3BGRL (ENSPMRG00000019393) ENSPMRG00000019385 ENSPMRG00000019373 Argentine black and white tegu MODERN SPECIES 75 ENSSMRG00000008378 ENSSMRG00000008379 POLR1D (ENSSMRG00000008381) VAMP7 (ENSSMRG00000008383) ENSSMRG00000008384 ENSSMRG00000008386 NSDHL (ENSSMRG00000008401) ENSSMRG00000008408 DACH2 (ENSSMRG00000008420) ENSSMRG00000008459 POF1B (ENSSMRG00000008469) ZNF711 (ENSSMRG00000008476) ENSSMRG00000008481 #22 APOOL (ENSSMRG00000008484) ENSSMRG00000008499 ENSSMRG00000008508 HDX (ENSSMRG00000008512) RPS6KA6 (ENSSMRG00000008523) POU3F4 (ENSSMRG00000008536) ENSSMRG00000008539 ENSSMRG00000008541 ENSSMRG00000008543 SH3BGRL (ENSSMRG00000008544) ENSSMRG00000008553 BRWD3 (ENSSMRG00000008563) ENSSMRG00000009214 TENT5D (ENSSMRG00000009218) ENSSMRG00000009220 Toxicofera ANCESTRAL SPECIES 17 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237.ab ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 Lizard MODERN SPECIES 816 ENSACAG00000015665 ENSACAG00000026028 TMLHE (ENSACAG00000015669) SPRY3 (ENSACAG00000015693) ENSACAG00000015705 ENSACAG00000015753 VAMP7 (ENSACAG00000015766) ENSACAG00000015810 ENSACAG00000015811 ENSACAG00000015812 CETN1 (ENSACAG00000042849) DACH2 (ENSACAG00000013802) ENSACAG00000013859 ZNF711 (ENSACAG00000014034) ENSACAG00000031924 ENSACAG00000014050 #22 APOOL (ENSACAG00000014061) ENSACAG00000042317 ENSACAG00000040757 ENSACAG00000036836 ENSACAG00000014086 HDX (ENSACAG00000014116) ENSACAG00000036978 ENSACAG00000014143 POU3F4 (ENSACAG00000014539) ENSACAG00000042251 ENSACAG00000036157 ENSACAG00000029632 ENSACAG00000014544 ENSACAG00000022035 ENSACAG00000027776 Elapidae ANCESTRAL SPECIES 14 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A.l ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237.ab ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.a ENSGT00950000185720 ENSGT00950000183107.a.b.b ENSGT01050000244948.d Indian cobra MODERN SPECIES 13 ENSNNAG00000011801 ENSNNAG00000011739 TMLHE (ENSNNAG00000011710) SPRY3 (ENSNNAG00000011696) ENSNNAG00000011207 POLR1D (ENSNNAG00000011122) VAMP7 (ENSNNAG00000011027) ENSNNAG00000010868 NSDHL (ENSNNAG00000010830) ENSNNAG00000010804 DACH2 (ENSNNAG00000010642) ENSNNAG00000010418 POF1B (ENSNNAG00000010293) ZNF711 (ENSNNAG00000010263) ENSNNAG00000010213 ENSNNAG00000010176 #22 APOOL (ENSNNAG00000010158) ENSNNAG00000018865 HDX (ENSNNAG00000018861) RPS6KA6 (ENSNNAG00000018764) ENSNNAG00000018731 ENSNNAG00000018723 ENSNNAG00000018717 ENSNNAG00000018713 ENSNNAG00000018709 ENSNNAG00000018705 ENSNNAG00000018703 SH3BGRL (ENSNNAG00000018699) BRWD3 (ENSNNAG00000018367) ENSNNAG00000018272 ENSNNAG00000018270 Elapidae_a ANCESTRAL SPECIES 30 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A.l ENSGT00390000000141 ENSGT00940000159611 ENSGT00990000205517 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00960000189950 ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00940000156837.w Acanthophiinae ANCESTRAL SPECIES 20 ENSGT01060000248589.C ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00390000017860.a.a ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A.l ENSGT00390000000141 ENSGT00940000159611 ENSGT00990000205517 ENSGT00950000183121.b.b.b.a #22 ENSGT00530000063666.a ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000165353 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00940000156837.w Mainland tiger snake MODERN SPECIES 64 DKC1 (ENSNSUG00000000145) ENSNSUG00000000141 ENSNSUG00000000136 TMLHE (ENSNSUG00000000095) SPRY3 (ENSNSUG00000000072) ENSNSUG00000000065 ENSNSUG00000000043 POLR1D (ENSNSUG00000000015) VAMP7 (ENSNSUG00000020640) NSDHL (ENSNSUG00000020639) ENSNSUG00000020638 ENSNSUG00000020637 POF1B (ENSNSUG00000020636) ZNF711 (ENSNSUG00000020635) ENSNSUG00000020634 ENSNSUG00000020633 #22 ENSNSUG00000020631 HDX (ENSNSUG00000020630) RPS6KA6 (ENSNSUG00000020629) POU3F4 (ENSNSUG00000020628) ENSNSUG00000020627 ENSNSUG00000020626 ENSNSUG00000020625 ENSNSUG00000020624 SH3BGRL (ENSNSUG00000020623) ENSNSUG00000020622 BRWD3 (ENSNSUG00000020621) ENSNSUG00000020620 TENT5D (ENSNSUG00000020619) ERCC6L (ENSNSUG00000020618) TBX22 (ENSNSUG00000020617) Eastern brown snake MODERN SPECIES 20 DKC1 (ENSPTXG00000004607) ENSPTXG00000004612 ENSPTXG00000004614 TMLHE (ENSPTXG00000004616) ENSPTXG00000004620 ENSPTXG00000004623 POLR1D (ENSPTXG00000004628) VAMP7 (ENSPTXG00000004629) ENSPTXG00000004630 NSDHL (ENSPTXG00000004632) ENSPTXG00000004633 DACH2 (ENSPTXG00000004636) ENSPTXG00000004640 POF1B (ENSPTXG00000004728) ZNF711 (ENSPTXG00000004741) ENSPTXG00000004745 #22 APOOL (ENSPTXG00000004749) ENSPTXG00000004751 ENSPTXG00000004753 HDX (ENSPTXG00000004754) RPS6KA6 (ENSPTXG00000004755) ENSPTXG00000004757 ENSPTXG00000004758 ENSPTXG00000004760 ENSPTXG00000004761 SH3BGRL (ENSPTXG00000004762) ENSPTXG00000004763 BRWD3 (ENSPTXG00000004804) ENSPTXG00000004968 TENT5D (ENSPTXG00000004972) ENSPTXG00000004973 Blue-lipped sea krait MODERN SPECIES 1140 ENSLLTG00000006651 #22 Coelacanth MODERN SPECIES 2168 ZNF711 (ENSLACG00000002458) ENSLACG00000007389 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.b ##22 Euteleostomi ANCESTRAL SPECIES 130 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 Sarcopterygii ANCESTRAL SPECIES 117 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT01030000235848 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 Tetrapoda ANCESTRAL SPECIES ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT01090000260434 Amniota ANCESTRAL SPECIES ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b Mammalia ANCESTRAL SPECIES ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 Theria ANCESTRAL SPECIES 1 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C Eutheria ANCESTRAL SPECIES 26 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033 ENSGT00390000018199.b.b.b ENSGT01090000260076.b.b ENSGT00940000155485 Atlantogenata ANCESTRAL SPECIES 50 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033 ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Afrotheria ANCESTRAL SPECIES 66 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033 ENSGT00950000182900.D.d.b ENSGT00940000163797 ENSGT00940000165324 ENSGT01090000260076.b.b Tenrec MODERN SPECIES 17031 SAT1 (ENSETEG00000004431) ##22 Afrotheria_a ANCESTRAL SPECIES 64 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033 ENSGT00950000182900.D.d.b ENSGT00940000163797 ENSGT00940000165324 ENSGT01090000260076.b.b Elephant MODERN SPECIES 369 BCLAF3 (ENSLAFG00000008518) MAP7D2 (ENSLAFG00000023306) EIF1AX (ENSLAFG00000007016) RPS6KA3 (ENSLAFG00000007020) CNKSR2 (ENSLAFG00000007401) KLHL34 (ENSLAFG00000007404) SMPX (ENSLAFG00000001873) MBTPS2 (ENSLAFG00000017242) SMS (ENSLAFG00000003543) PHEX (ENSLAFG00000010566) ENSLAFG00000010569 ENSLAFG00000011531 PTCHD1 (ENSLAFG00000022742) PRDX4 (ENSLAFG00000002686) ACOT9 (ENSLAFG00000003152) SAT1 (ENSLAFG00000003153) ##22 APOO (ENSLAFG00000029070) KLHL15 (ENSLAFG00000011049) EIF2S3B (ENSLAFG00000011052) ENSLAFG00000006691 ENSLAFG00000027275 ENSLAFG00000027246 PDK3 (ENSLAFG00000021874) PCYT1B (ENSLAFG00000001774) POLA1 (ENSLAFG00000001776) ARX (ENSLAFG00000001779) MAGEB18 (ENSLAFG00000012104) ENSLAFG00000012101 ENSLAFG00000026132 ENSLAFG00000027289 ENSLAFG00000031282 Hyrax MODERN SPECIES 8708 SAT1 (ENSPCAG00000006243) ##22 Xenarthra ANCESTRAL SPECIES 700 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h Armadillo MODERN SPECIES 657 PRDX4 (ENSDNOG00000042636) ACOT9 (ENSDNOG00000008900) SAT1 (ENSDNOG00000038555) ##22 APOO (ENSDNOG00000006710) CXorf58 (ENSDNOG00000006734) ENSDNOG00000036056 KLHL15 (ENSDNOG00000010294) ENSDNOG00000018584 Sloth DUPLICATION Sloth DUPLICATION Sloth MODERN SPECIES 10950 ENSCHOG00000005567 ##22 Sloth MODERN SPECIES 9412 ENSCHOG00000009904 ##22 Sloth MODERN SPECIES 9918 ENSCHOG00000008647 ##22 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000163033.a.b ENSGT00940000159951 ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000163033.a.b ENSGT00940000159951 ENSGT00940000163033.b ENSGT00390000018199.b.b.b Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Tree shrew DUPLICATION Tree shrew MODERN SPECIES 2928 ENSTBEG00000015023 ##22 APOO (ENSTBEG00000014888) CXorf58 (ENSTBEG00000014782) ENSTBEG00000014649 MPZL3 (ENSTBEG00000014545) ENSTBEG00000014293 Tree shrew MODERN SPECIES 6943 ENSTBEG00000006868 ##22 Glires ANCESTRAL SPECIES 10 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Rodentia ANCESTRAL SPECIES 10 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Rodentia_A ANCESTRAL SPECIES 9 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.f ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163797.a.b ENSGT00940000163797.b ENSGT00940000167876 ENSGT01090000260076.b.b ENSGT00940000164194 Sciuridae ANCESTRAL SPECIES 28 ENSGT00390000008256.j ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00940000153680.a ENSGT00390000018687 ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.l.a ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.f ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b ENSGT00940000163797.a.b ENSGT00940000163797.b ENSGT00940000167876 Marmotini ANCESTRAL SPECIES 58 ENSGT00390000008256.j ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00940000153680.a ENSGT00390000018687 ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.l.a ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.f ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b ENSGT00940000164310.e ENSGT00940000163797.a.b ENSGT00940000167876 Marmotini_b ANCESTRAL SPECIES 69 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j ENSGT00940000159370 ENSGT00940000156709 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00940000153680.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.l.a ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.f ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 Arctic ground squirrel MODERN SPECIES 244 CNKSR2 (ENSUPAG00010022275) SMPX (ENSUPAG00010022289) MBTPS2 (ENSUPAG00010022292) SMS (ENSUPAG00010022295) PHEX (ENSUPAG00010022298) ENSUPAG00010022303 PTCHD1 (ENSUPAG00010022306) ENSUPAG00010022307 PRDX4 (ENSUPAG00010022308) ENSUPAG00010022309 ACOT9 (ENSUPAG00010022311) SAT1 (ENSUPAG00010022312) ##22 APOO (ENSUPAG00010022314) CXorf58 (ENSUPAG00010000033) ENSUPAG00010000063 KLHL15 (ENSUPAG00010000081) ENSUPAG00010000111 ZFX (ENSUPAG00010000173) ENSUPAG00010000236 PDK3 (ENSUPAG00010000247) PCYT1B (ENSUPAG00010000273) Squirrel MODERN SPECIES 224 SH3KBP1 (ENSSTOG00000024324) ENSSTOG00000031367 BCLAF3 (ENSSTOG00000020416) MAP7D2 (ENSSTOG00000013888) EIF1AX (ENSSTOG00000026117) RPS6KA3 (ENSSTOG00000010494) CNKSR2 (ENSSTOG00000011389) SMPX (ENSSTOG00000002549) MBTPS2 (ENSSTOG00000010473) ENSSTOG00000034135 PHEX (ENSSTOG00000006838) ENSSTOG00000027719 PTCHD1 (ENSSTOG00000024846) PRDX4 (ENSSTOG00000002028) ACOT9 (ENSSTOG00000002034) SAT1 (ENSSTOG00000019590) ##22 ENSSTOG00000002062 ENSSTOG00000026298 CXorf58 (ENSSTOG00000002201) KLHL15 (ENSSTOG00000002209) EIF2S3B (ENSSTOG00000007144) ZFX (ENSSTOG00000007158) PDK3 (ENSSTOG00000014894) PCYT1B (ENSSTOG00000014901) Alpin marmot MODERN SPECIES 21 CNKSR2 (ENSMMMG00000008093) KLHL34 (ENSMMMG00000008160) SMPX (ENSMMMG00000008177) MBTPS2 (ENSMMMG00000008190) ENSMMMG00000008211 ENSMMMG00000008215 SMS (ENSMMMG00000008225) PHEX (ENSMMMG00000008240) ENSMMMG00000008274 PTCHD1 (ENSMMMG00000008301) ENSMMMG00000008306 PRDX4 (ENSMMMG00000008312) ENSMMMG00000008328 ACOT9 (ENSMMMG00000008333) ENSMMMG00000008424 SAT1 (ENSMMMG00000008428) ##22 APOO (ENSMMMG00000008451) CXorf58 (ENSMMMG00000008519) EIF2S3 (ENSMMMG00000008529) ZFX (ENSMMMG00000008555) ENSMMMG00000008577 PCYT1B (ENSMMMG00000008589) POLA1 (ENSMMMG00000008608) MAGEB18 (ENSMMMG00000008662) MAGEB5 (ENSMMMG00000008678) ENSMMMG00000008683 PPP4R3C (ENSMMMG00000008719) ENSMMMG00000008728 ENSMMMG00000008731 ENSMMMG00000008747 MAGEB10 (ENSMMMG00000008757) Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005024989 RPS6KA3 (ENSSVLG00005024949) CNKSR2 (ENSSVLG00005023957) KLHL34 (ENSSVLG00005023744) SMPX (ENSSVLG00005023721) MBTPS2 (ENSSVLG00005023689) ENSSVLG00005023659 ENSSVLG00005023650 SMS (ENSSVLG00005023626) PHEX (ENSSVLG00005023506) ENSSVLG00005023477 PTCHD1 (ENSSVLG00005023442) PRDX4 (ENSSVLG00005023403) ENSSVLG00005023374 ACOT9 (ENSSVLG00005023115) SAT1 (ENSSVLG00005023019) ##22 ENSSVLG00005022952 ENSSVLG00005022936 KLHL15 (ENSSVLG00005022911) ENSSVLG00005022884 ZFX (ENSSVLG00005022729) ENSSVLG00005022681 ENSSVLG00005022642 PDK3 (ENSSVLG00005022599) PCYT1B (ENSSVLG00005022491) ENSSVLG00005022413 POLA1 (ENSSVLG00005021685) ARX (ENSSVLG00005021573) ENSSVLG00005021535 ENSSVLG00005021271 ENSSVLG00005021203 Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.f ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000018199.b.b.b ENSGT00940000163797.a.b ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B Naked mole-rat female MODERN SPECIES 31 PHEX (ENSHGLG00000003219) ENSHGLG00000001773 MBTPS2 (ENSHGLG00000001714) ENSHGLG00000046622 SMPX (ENSHGLG00000050435) ENSHGLG00000034421 KLHL34 (ENSHGLG00000020474) ENSHGLG00000001581 ENSHGLG00000036411 ENSHGLG00000041869 ENSHGLG00000000547 ENSHGLG00000035489 ENSHGLG00000004378 ENSHGLG00000004420 ENSHGLG00000004750 Sat1 (ENSHGLG00000034014) ##22 APOO (ENSHGLG00000005507) ENSHGLG00000029226 KLHL15 (ENSHGLG00000033316) ENSHGLG00000006530 ZFX (ENSHGLG00000047951) ENSHGLG00000033847 ENSHGLG00000007600 PCYT1B (ENSHGLG00000007905) POLA1 (ENSHGLG00000008558) ENSHGLG00000048510 ENSHGLG00000036446 ENSHGLG00000032182 ENSHGLG00000004333 ENSHGLG00000004387 ENSHGLG00000035446 Hystricomorpha_a ANCESTRAL SPECIES 60 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00940000154763.mb ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.f ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000018199.b.b.b ENSGT00940000163797.a.b ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B Guinea pig MODERN SPECIES 59 SH3KBP1 (ENSCPOG00000006433) BCLAF3 (ENSCPOG00000008695) MAP7D2 (ENSCPOG00000008706) EIF1AX (ENSCPOG00000039205) RPS6KA3 (ENSCPOG00000008719) CNKSR2 (ENSCPOG00000009806) KLHL34 (ENSCPOG00000035985) SMPX (ENSCPOG00000033393) MBTPS2 (ENSCPOG00000006171) ENSCPOG00000006176 PHEX (ENSCPOG00000006183) ENSCPOG00000013960 PTCHD1 (ENSCPOG00000035225) PRDX4 (ENSCPOG00000004185) ACOT9 (ENSCPOG00000004188) SAT1 (ENSCPOG00000037886) ##22 ENSCPOG00000004197 ENSCPOG00000014536 KLHL15 (ENSCPOG00000040332) EIF2S3B (ENSCPOG00000000660) ZFX (ENSCPOG00000033966) PDK3 (ENSCPOG00000008284) PCYT1B (ENSCPOG00000030037) POLA1 (ENSCPOG00000002139) ARX (ENSCPOG00000019871) ENSCPOG00000026257 Hystricomorpha_b ANCESTRAL SPECIES 73 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00940000154763.mb ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.f ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b.e.a ENSGT00940000159499 Degu DUPLICATION Degu MODERN SPECIES 82 CNKSR2 (ENSODEG00000014138) SMPX (ENSODEG00000013724) ENSODEG00000012861 MBTPS2 (ENSODEG00000013500) ENSODEG00000013775 ENSODEG00000020031 PHEX (ENSODEG00000012854) ENSODEG00000020024 ENSODEG00000014216 PTCHD1 (ENSODEG00000012754) ENSODEG00000013046 ENSODEG00000013721 ENSODEG00000012907 PRDX4 (ENSODEG00000014100) ENSODEG00000012911 ENSODEG00000013771 ##22 ENSODEG00000014344 APOO (ENSODEG00000014624) KLHL15 (ENSODEG00000013753) ENSODEG00000014340 ENSODEG00000013609 ENSODEG00000014084 ZFX (ENSODEG00000012957) PDK3 (ENSODEG00000013024) PCYT1B (ENSODEG00000012646) ENSODEG00000013614 POLA1 (ENSODEG00000013021) ARX (ENSODEG00000013376) ENSODEG00000020096 PPP4R3C (ENSODEG00000013461) ENSODEG00000020083 Degu MODERN SPECIES 57 ENSODEG00000007346 ENSODEG00000007771 ENSODEG00000007722 FN1 (ENSODEG00000008281) ENSODEG00000008301 ABCA12 (ENSODEG00000012235) ENSODEG00000008221 ENSODEG00000009279 VWC2L (ENSODEG00000008549) ENSODEG00000007901 ENSODEG00000008353 ##22 ENSODEG00000008509 IKZF2 (ENSODEG00000008010) ERBB4 (ENSODEG00000009033) ENSODEG00000013776 ENSODEG00000008980 CPS1 (ENSODEG00000007917) ENSODEG00000008576 LANCL1 (ENSODEG00000013138) MYL1 (ENSODEG00000007814) ACADL (ENSODEG00000008088) KANSL1L (ENSODEG00000008832) ENSODEG00000008423 UNC80 (ENSODEG00000009853) MAP2 (ENSODEG00000009342) ENSODEG00000019840 Long-tailed chinchilla MODERN SPECIES 216 BCLAF3 (ENSCLAG00000001580) MAP7D2 (ENSCLAG00000001716) EIF1AX (ENSCLAG00000000709) RPS6KA3 (ENSCLAG00000000667) CNKSR2 (ENSCLAG00000000928) KLHL34 (ENSCLAG00000017438) SMPX (ENSCLAG00000000955) MBTPS2 (ENSCLAG00000001960) ENSCLAG00000000440 SMS (ENSCLAG00000000492) PHEX (ENSCLAG00000000629) ENSCLAG00000017424 PTCHD1 (ENSCLAG00000002022) PRDX4 (ENSCLAG00000002107) ACOT9 (ENSCLAG00000002263) SAT1 (ENSCLAG00000002420) ##22 APOO (ENSCLAG00000001143) CXorf58 (ENSCLAG00000001251) KLHL15 (ENSCLAG00000001609) EIF2S3B (ENSCLAG00000001649) ZFX (ENSCLAG00000001815) ENSCLAG00000001062 PDK3 (ENSCLAG00000001187) PCYT1B (ENSCLAG00000001577) POLA1 (ENSCLAG00000003553) ARX (ENSCLAG00000001310) Rodentia_B ANCESTRAL SPECIES 31 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b ENSGT01090000260076.b.b Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.d ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951.z ENSGT00940000163033.a.b ENSGT00940000159951.y ENSGT00940000163033.b ENSGT00390000018199.b.b.b Muroidea ANCESTRAL SPECIES 30 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.d ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951.z ENSGT00940000163033.a.b ENSGT00940000159951.y ENSGT00940000163033.b Muroidea_A ANCESTRAL SPECIES 7 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00390000005717.e.b.b.b ENSGT00390000005717.e.b.b.a ENSGT00390000005717.e.b.a ENSGT00940000153421.a.a.a.a.b ENSGT00390000005717.e.a.b ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j ENSGT00940000159499 ENSGT01000000214434.B.b.e.a ENSGT00390000011425.B Murinae ANCESTRAL SPECIES 32 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 Mus ANCESTRAL SPECIES 9 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00860000136365 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00390000005717.e.b.b.a ENSGT00520000056155.g.a.c.a ENSGT00520000056155.g.b.a.b ENSGT00950000182925.D.a.b.a.a.a.b.a.a ENSGT00390000004891 ENSGT00940000163673 ENSGT00940000162603 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000162993 ENSGT00840000130063 ENSGT00940000163664 ENSGT00390000016722 ENSGT00940000155212 ENSGT00390000005717.e.a.a Mus_A ANCESTRAL SPECIES 15 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.a.a ENSGT00940000159370 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00860000136365 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00390000005717.e.b.b.a ENSGT00520000056155.g.a.c.a ENSGT00520000056155.g.b.a.b ENSGT00950000182925.D.a.b.a.a.a.b.a.a ENSGT00390000004891 ENSGT00940000163673 ENSGT00390000016779.b.a.a.a ENSGT00940000162603 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000162993 ENSGT00840000130063 ENSGT00940000163664 ENSGT00390000016722 ENSGT00940000155212 Mus_B ANCESTRAL SPECIES 14 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00860000136365 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.bb ENSGT00950000183121.b.b.b.b ##22 ENSGT00390000005717.e.b.b.a.f ENSGT00520000056155.g.a.c.a.a ENSGT00520000056155.g.b.a.a ENSGT00520000056155.g.a.c.a.b ENSGT00520000056155.g.b.a.b.a ENSGT00950000182925.D.a.b.a.a.a.b.a.a ENSGT00390000004891 ENSGT00940000163673 ENSGT00390000016779.b.a.a.a ENSGT00940000162603 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000162993 ENSGT00840000130063 ENSGT00940000163664 Mus_C ANCESTRAL SPECIES 22 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.a.a ENSGT00940000159370 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00860000136365 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.bb ENSGT00950000183121.b.b.b.b ##22 ENSGT00950000182925.D.a.b.a.a.a.b.a.a ENSGT00390000004891 ENSGT00940000163673 ENSGT00390000016779.b.a.a.a ENSGT00940000162603 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000162993 ENSGT00840000130063 ENSGT00390000016722 ENSGT00940000155212 ENSGT00390000005717.e.a.a ENSGT00890000139436.A.b ENSGT00940000162496 ENSGT00940000161236.a.a Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2031 Prdx4 (ENSMSIG00000013338) ENSMSIG00000013372 Acot9 (ENSMSIG00000013380) ENSMSIG00000013420 ##22 Steppe mouse MODERN SPECIES 2096 ENSMSIG00000022180 ENSMSIG00000022191 ##22 Cts3 (ENSMSIG00000022207) ENSMSIG00000022241 spretus MODERN SPECIES 19 Map7d2 (MGP_SPRETEiJ_G0034702) MGP_SPRETEiJ_G0034701 Rps6ka3 (MGP_SPRETEiJ_G0034700) MGP_SPRETEiJ_G0034699 Cnksr2 (MGP_SPRETEiJ_G0034698) Klhl34 (MGP_SPRETEiJ_G0034697) Smpx (MGP_SPRETEiJ_G0034696) Yy2 (MGP_SPRETEiJ_G0034695) Mbtps2 (MGP_SPRETEiJ_G0034694) Sms (MGP_SPRETEiJ_G0034693) Phex (MGP_SPRETEiJ_G0034692) MGP_SPRETEiJ_G0034691 Ptchd1 (MGP_SPRETEiJ_G0034690) Prdx4 (MGP_SPRETEiJ_G0034689) Acot9 (MGP_SPRETEiJ_G0034688) Sat1 (MGP_SPRETEiJ_G0034687) ##22 Samt4 (MGP_SPRETEiJ_G0034686) Spin2c (MGP_SPRETEiJ_G0034685) Nbdy (MGP_SPRETEiJ_G0034684) Kctd12b (MGP_SPRETEiJ_G0034683) MGP_SPRETEiJ_G0034682 MGP_SPRETEiJ_G0034681 Ubqln2 (MGP_SPRETEiJ_G0034680) Klf8 (MGP_SPRETEiJ_G0034679) Rragb (MGP_SPRETEiJ_G0034678) Foxr2 (MGP_SPRETEiJ_G0034677) Mageh1 (MGP_SPRETEiJ_G0034676) Gpr143 (MGP_SPRETEiJ_G0034675) Shroom2 (MGP_SPRETEiJ_G0034674) Cldn34a (MGP_SPRETEiJ_G0034673) Gpr173 (MGP_SPRETEiJ_G0034672) Mouse MODERN SPECIES 37 Bclaf3 (ENSMUSG00000044150) Map7d2 (ENSMUSG00000041020) Eif1ax (ENSMUSG00000067194) Rps6ka3 (ENSMUSG00000031309) Cnksr2 (ENSMUSG00000025658) Klhl34 (ENSMUSG00000047485) Smpx (ENSMUSG00000041476) Yy2 (ENSMUSG00000091736) Mbtps2 (ENSMUSG00000046873) Sms (ENSMUSG00000071708) Phex (ENSMUSG00000057457) Gm15155 (ENSMUSG00000055109) Ptchd1 (ENSMUSG00000041552) Prdx4 (ENSMUSG00000025289) Acot9 (ENSMUSG00000025287) Sat1 (ENSMUSG00000025283) ##22 Cldn34b2 (ENSMUSG00000057402) Magea1 (ENSMUSG00000096644) Magea5 (ENSMUSG00000079349) Magea2 (ENSMUSG00000055746) Magea8 (ENSMUSG00000079350) Magea3 (ENSMUSG00000094196) Magea6 (ENSMUSG00000063728) Cldn34b1 (ENSMUSG00000072100) Samt2 (ENSMUSG00000072888) Samt4 (ENSMUSG00000025051) Samt2b (ENSMUSG00000059663) Samt1d (ENSMUSG00000094592) Samt1c (ENSMUSG00000096867) Gm5645 (ENSMUSG00000121587) Samt1b (ENSMUSG00000094577) Ryukyu mouse MODERN SPECIES 19 MGP_CAROLIEiJ_G0033531 Rps6ka3 (MGP_CAROLIEiJ_G0033530) MGP_CAROLIEiJ_G0033529 Cnksr2 (MGP_CAROLIEiJ_G0033528) Klhl34 (MGP_CAROLIEiJ_G0033527) Smpx (MGP_CAROLIEiJ_G0033526) Yy2 (MGP_CAROLIEiJ_G0033525) Mbtps2 (MGP_CAROLIEiJ_G0033524) Sms (MGP_CAROLIEiJ_G0033523) Phex (MGP_CAROLIEiJ_G0033522) MGP_CAROLIEiJ_G0033521 Ptchd1 (MGP_CAROLIEiJ_G0033520) Prdx4 (MGP_CAROLIEiJ_G0033519) MGP_CAROLIEiJ_G0033518 MGP_CAROLIEiJ_G0033517 Sat1 (MGP_CAROLIEiJ_G0033516) ##22 Spin2c (MGP_CAROLIEiJ_G0033515) Nbdy (MGP_CAROLIEiJ_G0033514) Kctd12b (MGP_CAROLIEiJ_G0033513) Cypt3 (MGP_CAROLIEiJ_G0033512) Ubqln2 (MGP_CAROLIEiJ_G0033511) Klf8 (MGP_CAROLIEiJ_G0033510) Rragb (MGP_CAROLIEiJ_G0033509) Foxr2 (MGP_CAROLIEiJ_G0033508) Mageh1 (MGP_CAROLIEiJ_G0033507) Usp51 (MGP_CAROLIEiJ_G0033506) Gpr143 (MGP_CAROLIEiJ_G0033505) Shroom2 (MGP_CAROLIEiJ_G0033504) Cldn34a (MGP_CAROLIEiJ_G0033503) Gpr173 (MGP_CAROLIEiJ_G0033502) Tspyl2 (MGP_CAROLIEiJ_G0033501) Shrew mouse MODERN SPECIES 23 Bclaf3 (MGP_PahariEiJ_G0032072) Map7d2 (MGP_PahariEiJ_G0032071) MGP_PahariEiJ_G0032070 Rps6ka3 (MGP_PahariEiJ_G0032069) MGP_PahariEiJ_G0032068 Cnksr2 (MGP_PahariEiJ_G0032067) Klhl34 (MGP_PahariEiJ_G0032066) Smpx (MGP_PahariEiJ_G0032065) Yy2 (MGP_PahariEiJ_G0032064) Mbtps2 (MGP_PahariEiJ_G0032063) Sms (MGP_PahariEiJ_G0032062) Phex (MGP_PahariEiJ_G0032061) MGP_PahariEiJ_G0032060 Ptchd1 (MGP_PahariEiJ_G0032059) Prdx4 (MGP_PahariEiJ_G0032058) Sat1 (MGP_PahariEiJ_G0032057) ##22 MGP_PahariEiJ_G0032056 MGP_PahariEiJ_G0032055 MGP_PahariEiJ_G0032054 Spin2c (MGP_PahariEiJ_G0032053) Nbdy (MGP_PahariEiJ_G0032052) Kctd12b (MGP_PahariEiJ_G0032051) Ubqln2 (MGP_PahariEiJ_G0032050) Klf8 (MGP_PahariEiJ_G0032049) Rragb (MGP_PahariEiJ_G0032048) Foxr2 (MGP_PahariEiJ_G0032047) Mageh1 (MGP_PahariEiJ_G0032046) Usp51 (MGP_PahariEiJ_G0032045) Gpr143 (MGP_PahariEiJ_G0032044) Shroom2 (MGP_PahariEiJ_G0032043) Cldn34a (MGP_PahariEiJ_G0032042) Rat MODERN SPECIES 46 Klhl34 (ENSRNOG00000024479) Smpx (ENSRNOG00000007495) ENSRNOG00000068938 Yy2 (ENSRNOG00000007644) Sms (ENSRNOG00000007688) Phex (ENSRNOG00000023440) ENSRNOG00000067646 LOC100361934 (ENSRNOG00000034182) ENSRNOG00000064829 Ptchd1 (ENSRNOG00000069252) ENSRNOG00000067126 Magea8 (ENSRNOG00000066429) Prdx4 (ENSRNOG00000003763) Acot9 (ENSRNOG00000003782) LOC102557137 (ENSRNOG00000059697) Sat1 (ENSRNOG00000003809) ##22 Cldn34b (ENSRNOG00000071107) Magea10-ps4 (ENSRNOG00000066349) ENSRNOG00000068897 Magea10-ps5 (ENSRNOG00000064790) LOC100362173 (ENSRNOG00000029158) LOC680190 (ENSRNOG00000065503) AABR07038250.1 (ENSRNOG00000003860) ENSRNOG00000064007 Cldn34d (ENSRNOG00000043402) LOC317456 (ENSRNOG00000003883) AABR07038269.1 (ENSRNOG00000050081) Tbl1x (ENSRNOG00000003686) Cldn34e (ENSRNOG00000026351) Bnip3-ps3 (ENSRNOG00000065427) Prkx (ENSRNOG00000060168) Cricetidae ANCESTRAL SPECIES 8 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.a.a ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.cc.a ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00390000005717.e.b.b.b ENSGT00390000005717.e.b.b.a ENSGT00390000005717.e.b.a ENSGT00940000153421.a.a.a.a.b ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.d ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.a ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00940000162492.f ENSGT00530000063484.b.b ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j Cricetidae_B ANCESTRAL SPECIES 36 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.a.a ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.cc.a ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00390000005717.e.b.b.b ENSGT00390000005717.e.b.b.a ENSGT00390000005717.e.b.a ENSGT00940000153421.a.a.a.a.b ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.d ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00940000162492.f ENSGT00530000063484.b.b ENSGT01090000260076.b.b ENSGT00940000155485.f.b Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000026098 Rps6ka3 (ENSPEMG00000018584) ENSPEMG00000026965 Cnksr2 (ENSPEMG00000012770) Klhl34 (ENSPEMG00000026377) Smpx (ENSPEMG00000011852) ENSPEMG00000026716 Mbtps2 (ENSPEMG00000012008) Sms (ENSPEMG00000003756) Phex (ENSPEMG00000017527) Ptchd1 (ENSPEMG00000024561) Prdx4 (ENSPEMG00000015131) ENSPEMG00000017644 ENSPEMG00000028779 ENSPEMG00000002650 Sat1 (ENSPEMG00000001319) ##22 ENSPEMG00000025993 ENSPEMG00000026202 Cldn34b4 (ENSPEMG00000003717) ENSPEMG00000026374 ENSPEMG00000025316 ENSPEMG00000025248 ENSPEMG00000029386 Tbl1x (ENSPEMG00000017480) ENSPEMG00000030079 Prkx (ENSPEMG00000030408) Pbsn (ENSPEMG00000012253) ENSPEMG00000023281 ENSPEMG00000027218 ENSPEMG00000015794 ENSPEMG00000024840 Prairie vole MODERN SPECIES 360 Rps6ka3 (ENSMOCG00000012164) ENSMOCG00000016797 ENSMOCG00000017907 Cnksr2 (ENSMOCG00000000158) Smpx (ENSMOCG00000009712) Mbtps2 (ENSMOCG00000016533) Yy2 (ENSMOCG00000013780) Sms (ENSMOCG00000016092) Phex (ENSMOCG00000021326) ENSMOCG00000006009 ENSMOCG00000012478 ENSMOCG00000017700 Ptchd1 (ENSMOCG00000020483) Prdx4 (ENSMOCG00000014602) ENSMOCG00000002108 Sat1 (ENSMOCG00000012276) ##22 ENSMOCG00000012729 ENSMOCG00000021049 ENSMOCG00000013763 Spin2c (ENSMOCG00000001348) ENSMOCG00000003551 Kctd12b (ENSMOCG00000015728) Klf8 (ENSMOCG00000000163) ENSMOCG00000002121 ENSMOCG00000013664 Rragb (ENSMOCG00000010568) Mageh1 (ENSMOCG00000010509) ENSMOCG00000010679 Tmem29 (ENSMOCG00000020676) ENSMOCG00000021282 Alas2 (ENSMOCG00000021931) Cricetinae ANCESTRAL SPECIES 17 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.cc.a ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00940000153421.a.a.a.a.b ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.d ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.a ENSGT00940000158538 ENSGT00940000162492.f ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j ENSGT00940000159499 ENSGT01000000214434.B.b.e.a ENSGT00390000011425.B ENSGT00390000015719.d Chinese hamster chok1gshd MODERN SPECIES 230 Bclaf3 (ENSCGRG00001017632) Map7d2 (ENSCGRG00001005576) ENSCGRG00001022852 Rps6ka3 (ENSCGRG00001007518) Cnksr2 (ENSCGRG00001022169) Klhl34 (ENSCGRG00001014357) Smpx (ENSCGRG00001020401) MBTPS2 (ENSCGRG00001018020) ENSCGRG00001000646 Phex (ENSCGRG00001019759) ENSCGRG00001015986 ENSCGRG00001015828 Ptchd1 (ENSCGRG00001010854) Prdx4 (ENSCGRG00001009299) ENSCGRG00001000350 SAT1 (ENSCGRG00001022103) ##22 ENSCGRG00001013998 Cldn34d (ENSCGRG00001014236) ENSCGRG00001013899 ENSCGRG00001017212 ENSCGRG00001013770 Tbl1x (ENSCGRG00001016098) Prkx (ENSCGRG00001011584) Pbsn (ENSCGRG00001011020) ENSCGRG00001000213 ENSCGRG00001019539 ENSCGRG00001017585 ENSCGRG00001000265 ENSCGRG00001019344 Prrg1 (ENSCGRG00001018689) ENSCGRG00001016254 Golden Hamster MODERN SPECIES 695 Cplane1 (ENSMAUG00000001083) Nup155 (ENSMAUG00000003381) Wdr70 (ENSMAUG00000007958) Gdnf (ENSMAUG00000019401) Egflam (ENSMAUG00000015382) Lifr (ENSMAUG00000015733) Osmr (ENSMAUG00000019728) Rictor (ENSMAUG00000013015) Fyb (ENSMAUG00000001181) C9 (ENSMAUG00000018301) ENSMAUG00000015397 Ptger4 (ENSMAUG00000014264) Ptchd1 (ENSMAUG00000002646) Prdx4 (ENSMAUG00000021607) ENSMAUG00000008759 Sat1 (ENSMAUG00000019369) ##22 Tbl1x (ENSMAUG00000006903) ENSMAUG00000016228 ENSMAUG00000018492 Prkx (ENSMAUG00000016058) Pbsn (ENSMAUG00000012035) Upper Galilee mountains blind mole rat MODERN SPECIES 1809 Prdx4 (ENSNGAG00000017832) ENSNGAG00000019705 Sat1 (ENSNGAG00000019718) ##22 Apoo (ENSNGAG00000004749) Klhl15 (ENSNGAG00000014767) Eif2s3y (ENSNGAG00000017820) Zfx (ENSNGAG00000001519) Pdk3 (ENSNGAG00000017484) Pcyt1b (ENSNGAG00000014883) Pola1 (ENSNGAG00000016221) Arx (ENSNGAG00000013379) Mageb18 (ENSNGAG00000015560) ENSNGAG00000016776 Il1rapl1 (ENSNGAG00000007812) ENSNGAG00000000454 ENSNGAG00000000874 Nr0b1 (ENSNGAG00000011877) Tasl (ENSNGAG00000017529) Lesser Egyptian jerboa MODERN SPECIES 181 Mbtps2 (ENSJJAG00000018054) ENSJJAG00000020103 ENSJJAG00000018939 ENSJJAG00000018400 Phex (ENSJJAG00000016278) ENSJJAG00000011172 Ptchd1 (ENSJJAG00000011115) Prdx4 (ENSJJAG00000010956) ENSJJAG00000010555 ENSJJAG00000001286 Sat1 (ENSJJAG00000018848) ##22 Apoo (ENSJJAG00000016208) Klhl15 (ENSJJAG00000014191) ENSJJAG00000013657 ENSJJAG00000013340 ENSJJAG00000013227 ENSJJAG00000020199 Pdk3 (ENSJJAG00000019636) Pcyt1b (ENSJJAG00000018918) ENSJJAG00000015709 Pola1 (ENSJJAG00000010480) Arx (ENSJJAG00000022425) ENSJJAG00000019501 ENSJJAG00000018845 ENSJJAG00000012816 Kangaroo rat MODERN SPECIES 413 Bclaf3 (ENSDORG00000007988) Map7d2 (ENSDORG00000007990) ENSDORG00000011536 Rps6ka3 (ENSDORG00000011802) ENSDORG00000029700 Cnksr2 (ENSDORG00000010230) Smpx (ENSDORG00000003075) Mbtps2 (ENSDORG00000011065) Yy2 (ENSDORG00000011068) ENSDORG00000016069 ENSDORG00000025753 Phex (ENSDORG00000010976) Ptchd1 (ENSDORG00000004212) Prdx4 (ENSDORG00000002908) ENSDORG00000002910 Sat1 (ENSDORG00000028241) ##22 Apoo (ENSDORG00000015741) Klhl15 (ENSDORG00000028113) Eif2s3y (ENSDORG00000007498) Zfx (ENSDORG00000026778) Pdk3 (ENSDORG00000015657) Pcyt1b (ENSDORG00000009498) Pola1 (ENSDORG00000010871) Arx (ENSDORG00000026927) ENSDORG00000024340 Mageb18 (ENSDORG00000007363) ENSDORG00000027285 Il1rapl1 (ENSDORG00000006776) Nr0b1 (ENSDORG00000010383) Tasl (ENSDORG00000027690) Gk (ENSDORG00000004833) Lagomorpha ANCESTRAL SPECIES 49 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.a ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b ENSGT00940000163797.a.b Rabbit MODERN SPECIES 1401 RPS6KA3 (ENSOCUG00000025948) ENSOCUG00000027568 CNKSR2 (ENSOCUG00000014660) KLHL34 (ENSOCUG00000014678) SMPX (ENSOCUG00000001849) MBTPS2 (ENSOCUG00000016386) SMS (ENSOCUG00000006016) PHEX (ENSOCUG00000006020) ENSOCUG00000004437 PTCHD1 (ENSOCUG00000014375) ENSOCUG00000032925 ENSOCUG00000022336 ENSOCUG00000037984 PRDX4 (ENSOCUG00000004786) ACOT9 (ENSOCUG00000004779) ENSOCUG00000009645 ##22 ENSOCUG00000014006 CXorf58 (ENSOCUG00000009648) KLHL15 (ENSOCUG00000006668) ENSOCUG00000006592 ENSOCUG00000003815 ENSOCUG00000021737 ENSOCUG00000024600 ENSOCUG00000033283 PDK3 (ENSOCUG00000007418) PCYT1B (ENSOCUG00000007424) ENSOCUG00000021995 POLA1 (ENSOCUG00000015209) ARX (ENSOCUG00000022180) ENSOCUG00000006236 ENSOCUG00000036870 Pika MODERN SPECIES 1019 ENSOPRG00000013777 ##22 Primates ANCESTRAL SPECIES 19 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Strepsirrhini ANCESTRAL SPECIES 23 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066.b ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B Bushbaby MODERN SPECIES 166 ENSOGAG00000008182 RPS6KA3 (ENSOGAG00000008184) ENSOGAG00000032783 CNKSR2 (ENSOGAG00000015464) KLHL34 (ENSOGAG00000027270) SMPX (ENSOGAG00000015469) MBTPS2 (ENSOGAG00000011151) ENSOGAG00000010892 PHEX (ENSOGAG00000010894) ENSOGAG00000026282 PTCHD1 (ENSOGAG00000016650) ENSOGAG00000034242 ENSOGAG00000026297 PRDX4 (ENSOGAG00000011610) ACOT9 (ENSOGAG00000002305) SAT1 (ENSOGAG00000010447) ##22 APOO (ENSOGAG00000001960) CXorf58 (ENSOGAG00000001963) KLHL15 (ENSOGAG00000026827) ENSOGAG00000007723 ENSOGAG00000005884 ENSOGAG00000031796 PDK3 (ENSOGAG00000005598) PCYT1B (ENSOGAG00000005599) POLA1 (ENSOGAG00000014195) ARX (ENSOGAG00000026726) ENSOGAG00000027530 ENSOGAG00000032706 MAGEB18 (ENSOGAG00000009014) ENSOGAG00000011637 ENSOGAG00000025546 Lemuriformes ANCESTRAL SPECIES 48 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066.b ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b.e.a.l ENSGT00940000159499 Mouse lemur MODERN SPECIES 169 MAP7D2 (ENSMICG00000004105) EIF1AX (ENSMICG00000004110) RPS6KA3 (ENSMICG00000004112) CNKSR2 (ENSMICG00000002912) KLHL34 (ENSMICG00000028251) SMPX (ENSMICG00000008915) ENSMICG00000044479 MBTPS2 (ENSMICG00000008917) ENSMICG00000030382 ENSMICG00000037442 ENSMICG00000000192 PHEX (ENSMICG00000000193) PTCHD1 (ENSMICG00000000824) PRDX4 (ENSMICG00000031550) ACOT9 (ENSMICG00000003532) SAT1 (ENSMICG00000028733) ##22 ENSMICG00000010756 CXorf58 (ENSMICG00000036290) KLHL15 (ENSMICG00000038607) EIF2S3B (ENSMICG00000017858) ENSMICG00000009517 PDK3 (ENSMICG00000009061) PCYT1B (ENSMICG00000009068) POLA1 (ENSMICG00000002524) ARX (ENSMICG00000044540) ENSMICG00000029119 ENSMICG00000030568 ENSMICG00000036346 ENSMICG00000043208 IL1RAPL1 (ENSMICG00000009756) ENSMICG00000013694 Lemuriformes_a ANCESTRAL SPECIES 187 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066.b ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 Coquerels sifaka MODERN SPECIES 654 MYF5 (ENSPCOG00000012709) MYF6 (ENSPCOG00000021756) PTPRQ (ENSPCOG00000012150) OTOGL (ENSPCOG00000027646) PPP1R12A (ENSPCOG00000018987) PAWR (ENSPCOG00000018957) SYT1 (ENSPCOG00000025512) CNKSR2 (ENSPCOG00000014884) SMPX (ENSPCOG00000025800) MBTPS2 (ENSPCOG00000008143) ENSPCOG00000017400 PHEX (ENSPCOG00000025455) PTCHD1 (ENSPCOG00000010244) PRDX4 (ENSPCOG00000021645) ACOT9 (ENSPCOG00000017631) SAT1 (ENSPCOG00000022263) ##22 APOO (ENSPCOG00000020962) ENSPCOG00000008920 CXorf58 (ENSPCOG00000011026) KLHL15 (ENSPCOG00000019009) EIF2S3B (ENSPCOG00000023912) ENSPCOG00000024581 ENSPCOG00000022367 PCYT1B (ENSPCOG00000023887) POLA1 (ENSPCOG00000017586) ARX (ENSPCOG00000025163) Greater bamboo lemur MODERN SPECIES 1010 PRDX4 (ENSPSMG00000008061) ACOT9 (ENSPSMG00000008095) SAT1 (ENSPSMG00000008137) ##22 Haplorrhini ANCESTRAL SPECIES 18 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Tarsier MODERN SPECIES 5791 ENSTSYG00000004142 SAT1 (ENSTSYG00000033808) ##22 SNX13 (ENSTSYG00000027547) Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b.b Platyrrhini ANCESTRAL SPECIES 28 ENSGT00940000155886.g ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00390000003791.g.b ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.d ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000005534.b.b.c.b.b.b ENSGT00940000163797.a.b ENSGT00940000167876 ENSGT00950000182900.D.d.b.a ENSGT01090000260076.b.b Cebidae ANCESTRAL SPECIES 18 ENSGT00940000155886.g ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00390000003791.g.b ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.d.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000005534.b.b.c.b.b.b ENSGT00940000163449 ENSGT00940000159951.q ENSGT00390000018199.b.b.b ENSGT00940000163797.a.b ENSGT00940000167876 Marmoset MODERN SPECIES 78 ENSCJAG00000073658 CNKSR2 (ENSCJAG00000005220) KLHL34 (ENSCJAG00000041270) SMPX (ENSCJAG00000005203) MBTPS2 (ENSCJAG00000046733) SMS (ENSCJAG00000033933) PHEX (ENSCJAG00000005121) ENSCJAG00000072524 ENSCJAG00000073282 ENSCJAG00000060367 PTCHD1 (ENSCJAG00000005108) ENSCJAG00000072526 ENSCJAG00000005061 ACOT9 (ENSCJAG00000040134) ENSCJAG00000075691 SAT1 (ENSCJAG00000044803) ##22 ENSCJAG00000075066 ENSCJAG00000004909 CXorf58 (ENSCJAG00000032487) ENSCJAG00000074626 KLHL15 (ENSCJAG00000051881) EIF2S3 (ENSCJAG00000004867) ZFX (ENSCJAG00000004841) PDK3 (ENSCJAG00000004785) PCYT1B (ENSCJAG00000004756) POLA1 (ENSCJAG00000004743) ARX (ENSCJAG00000039277) ENSCJAG00000065853 MAGEB18 (ENSCJAG00000045820) ENSCJAG00000007122 PPP4R3C (ENSCJAG00000032445) Cebidae_a ANCESTRAL SPECIES 36 ENSGT00940000159562 ENSGT00940000155886.g ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00390000003791.g.b ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.d.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000005534.b.b.c.b.b.b.d ENSGT00940000159951.q ENSGT00940000159951.r ENSGT00940000163033.a.b ENSGT00950000182900.D.d.b.a ENSGT01090000260076.b.b Capuchin MODERN SPECIES 526 ENSCCAG00000021534 PTCHD1 (ENSCCAG00000018554) ENSCCAG00000037752 PRDX4 (ENSCCAG00000036401) ACOT9 (ENSCCAG00000031982) SAT1 (ENSCCAG00000028940) ##22 ENSCCAG00000028475 CXorf58 (ENSCCAG00000025687) KLHL15 (ENSCCAG00000029197) EIF2S3 (ENSCCAG00000030263) ENSCCAG00000023372 ENSCCAG00000036722 Bolivian squirrel monkey MODERN SPECIES 51 ENSSBOG00000031558 ENSSBOG00000029635 RPS6KA3 (ENSSBOG00000034830) ENSSBOG00000018382 CNKSR2 (ENSSBOG00000029741) SMPX (ENSSBOG00000033495) MBTPS2 (ENSSBOG00000029363) SMS (ENSSBOG00000024222) ENSSBOG00000000154 PHEX (ENSSBOG00000035899) ENSSBOG00000022205 ENSSBOG00000017959 PTCHD1 (ENSSBOG00000022861) PRDX4 (ENSSBOG00000026851) ACOT9 (ENSSBOG00000035947) SAT1 (ENSSBOG00000023952) ##22 ENSSBOG00000023578 CXorf58 (ENSSBOG00000023363) KLHL15 (ENSSBOG00000011468) EIF2S3 (ENSSBOG00000022630) ENSSBOG00000006323 ZFX (ENSSBOG00000031673) PDK3 (ENSSBOG00000032538) PCYT1B (ENSSBOG00000023731) POLA1 (ENSSBOG00000019711) ARX (ENSSBOG00000022256) ENSSBOG00000035884 ENSSBOG00000028767 ENSSBOG00000026493 MAGEB5 (ENSSBOG00000020311) ENSSBOG00000022729 Mas night monkey MODERN SPECIES 473 ENSANAG00000035553 PTCHD1 (ENSANAG00000036323) ENSANAG00000001160 PRDX4 (ENSANAG00000030779) ACOT9 (ENSANAG00000038135) SAT1 (ENSANAG00000015939) ##22 APOO (ENSANAG00000030748) CXorf58 (ENSANAG00000024246) KLHL15 (ENSANAG00000028322) EIF2S3 (ENSANAG00000032604) ZFX (ENSANAG00000027404) ENSANAG00000004074 PDK3 (ENSANAG00000019128) ENSANAG00000020726 PCYT1B (ENSANAG00000022820) POLA1 (ENSANAG00000031620) ARX (ENSANAG00000030082) ENSANAG00000035782 ENSANAG00000037197 ENSANAG00000007375 ENSANAG00000001214 Catarrhini ANCESTRAL SPECIES 12 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.ob.b ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.c.a ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00730000111329.k.b.b Cercopithecidae ANCESTRAL SPECIES 27 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.ob.b ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.c.a.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00950000182900.D.d.b.b ENSGT00940000163797.b Rhinopithecus ANCESTRAL SPECIES 877 ENSGT00950000183121.b.b.b.b ##22 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b ENSGT00530000063666.b.h.b Golden snub-nosed monkey MODERN SPECIES 2324 SAT1 (ENSRROG00000042719) ##22 ENSRROG00000034497 APOO (ENSRROG00000028881) ENSRROG00000025906 CXorf58 (ENSRROG00000029252) Black snub-nosed monkey MODERN SPECIES 234 SAT1 (ENSRBIG00000042183) ##22 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.ob.b ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.c.a.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00950000182900.D.d.b.b ENSGT00940000163797.b Vervet Monkey MODERN SPECIES 203 BCLAF3 (ENSCSAG00000014582) MAP7D2 (ENSCSAG00000014575) EIF1AX (ENSCSAG00000014562) RPS6KA3 (ENSCSAG00000014553) CNKSR2 (ENSCSAG00000014511) KLHL34 (ENSCSAG00000019538) SMPX (ENSCSAG00000014455) MBTPS2 (ENSCSAG00000014446) SMS (ENSCSAG00000014438) PHEX (ENSCSAG00000014426) ENSCSAG00000019539 DDX53 (ENSCSAG00000019540) PTCHD1 (ENSCSAG00000014414) PRDX4 (ENSCSAG00000014411) ACOT9 (ENSCSAG00000014405) SAT1 (ENSCSAG00000014398) ##22 APOO (ENSCSAG00000014393) CXorf58 (ENSCSAG00000014383) KLHL15 (ENSCSAG00000014371) PDK3 (ENSCSAG00000014363) PCYT1B (ENSCSAG00000014356) POLA1 (ENSCSAG00000014344) ARX (ENSCSAG00000014321) MAGEB18 (ENSCSAG00000019541) ENSCSAG00000014304 ENSCSAG00000019542 DCAF8L2 (ENSCSAG00000019543) MAGEB10 (ENSCSAG00000019544) ENSCSAG00000019545 ENSCSAG00000014289 IL1RAPL1 (ENSCSAG00000014283) Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000159562.e.b ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.ob.b ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.c.a.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.f ENSGT00390000013549.a.b.b.e ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00950000182900.D.d.b.b Cercopithecinae_b ANCESTRAL SPECIES 35 ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00940000153558.b.i.b.a.a.b ENSGT00510000048066 ENSGT00870000136506.ob.b ENSGT00940000157313 ENSGT01050000244986.b.b.d.a.b ENSGT00940000167221 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b.a ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.c.a.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.f ENSGT00390000013549.a.b.b.e ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00950000183087.A.a.b.b.g.f.c.b Olive baboon MODERN SPECIES 792 SMPX (ENSPANG00000005741) ENSPANG00000050152 MBTPS2 (ENSPANG00000024280) SMS (ENSPANG00000003155) PHEX (ENSPANG00000010105) ENSPANG00000037098 CBLL2 (ENSPANG00000046007) ENSPANG00000037872 ENSPANG00000045931 ENSPANG00000035706 DDX53 (ENSPANG00000037837) PTCHD1 (ENSPANG00000050101) ENSPANG00000048545 PRDX4 (ENSPANG00000007586) ACOT9 (ENSPANG00000009587) SAT1 (ENSPANG00000004013) ##22 ENSPANG00000010731 APOO (ENSPANG00000009164) CXorf58 (ENSPANG00000017030) KLHL15 (ENSPANG00000010573) ENSPANG00000004507 ENSPANG00000045157 ZFX (ENSPANG00000000982) ENSPANG00000020386 ENSPANG00000010730 ENSPANG00000049773 ENSPANG00000042252 PDK3 (ENSPANG00000017372) PCYT1B (ENSPANG00000002970) ARX (ENSPANG00000008103) ENSPANG00000039655 Cercopithecinae_d ANCESTRAL SPECIES 51 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00940000153558.b.i.b.a.a.b ENSGT00510000048066 ENSGT00870000136506.ob.b ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b.a ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.c.a.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.f ENSGT00390000013549.a.b.b.e ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00940000159951.u Drill MODERN SPECIES 969 CNKSR2 (ENSMLEG00000034848) KLHL34 (ENSMLEG00000027014) SMPX (ENSMLEG00000011007) ENSMLEG00000031125 MBTPS2 (ENSMLEG00000033520) ENSMLEG00000041004 PHEX (ENSMLEG00000036549) ENSMLEG00000039553 PTCHD1 (ENSMLEG00000032417) PRDX4 (ENSMLEG00000037898) ACOT9 (ENSMLEG00000009734) SAT1 (ENSMLEG00000041888) ##22 ENSMLEG00000039447 APOO (ENSMLEG00000036419) CXorf58 (ENSMLEG00000031197) KLHL15 (ENSMLEG00000012848) ENSMLEG00000034681 ZFX (ENSMLEG00000037688) ENSMLEG00000029455 ENSMLEG00000030346 PDK3 (ENSMLEG00000044110) PCYT1B (ENSMLEG00000030552) POLA1 (ENSMLEG00000037959) Sooty mangabey MODERN SPECIES 448 MAP7D2 (ENSCATG00000042697) EIF1AX (ENSCATG00000033237) RPS6KA3 (ENSCATG00000036143) ENSCATG00000035316 CNKSR2 (ENSCATG00000035326) KLHL34 (ENSCATG00000014878) SMPX (ENSCATG00000043293) ENSCATG00000037334 MBTPS2 (ENSCATG00000031542) SMS (ENSCATG00000032661) PHEX (ENSCATG00000031574) CBLL2 (ENSCATG00000014814) PTCHD1 (ENSCATG00000018108) PRDX4 (ENSCATG00000040922) ACOT9 (ENSCATG00000031637) SAT1 (ENSCATG00000044813) ##22 ENSCATG00000032289 APOO (ENSCATG00000031869) CXorf58 (ENSCATG00000031616) KLHL15 (ENSCATG00000030150) ENSCATG00000037374 ZFX (ENSCATG00000041857) ENSCATG00000014423 PDK3 (ENSCATG00000037824) PCYT1B (ENSCATG00000015494) POLA1 (ENSCATG00000039397) ARX (ENSCATG00000032913) ENSCATG00000037255 ENSCATG00000018666 ENSCATG00000016388 ENSCATG00000042070 Macaca ANCESTRAL SPECIES 29 ENSGT00940000159562.e.b ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.ob.b ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00940000154326.a.a.h.e.a ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.c.a.b Macaca_a ANCESTRAL SPECIES 11 ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000164709.a.b.b.a.b.b.b.a.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.ob.b ENSGT00940000157313 ENSGT01050000244986.b.b.d.a.b ENSGT00940000167221 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.c.a.b ENSGT00940000158684 ENSGT00440000038159.p.a.e.b.b ENSGT00390000013549.a.b.b.f ENSGT00390000013549.a.b.b.e ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00950000183087.A.a.b.b.g.f.c.b ENSGT00940000163449 ENSGT00940000159951.u Rhesus MODERN SPECIES 327 RPS6KA3 (ENSMMUG00000002134) ENSMMUG00000063057 CNKSR2 (ENSMMUG00000007500) KLHL34 (ENSMMUG00000007501) SMPX (ENSMMUG00000057558) YY2 (ENSMMUG00000022467) ENSMMUG00000051932 SMS (ENSMMUG00000020392) PHEX (ENSMMUG00000023589) CBLL2 (ENSMMUG00000003250) DDX53 (ENSMMUG00000022142) PTCHD1 (ENSMMUG00000001088) PRDX4 (ENSMMUG00000021366) ENSMMUG00000056089 ACOT9 (ENSMMUG00000018824) SAT1 (ENSMMUG00000060580) ##22 ENSMMUG00000057253 APOO (ENSMMUG00000016361) CXHXorf58 (ENSMMUG00000064452) KLHL15 (ENSMMUG00000037633) ENSMMUG00000006979 ZFX (ENSMMUG00000009801) ENSMMUG00000032498 ENSMMUG00000042317 ENSMMUG00000042416 PDK3 (ENSMMUG00000012819) PCYT1B (ENSMMUG00000012821) POLA1 (ENSMMUG00000018433) ARX (ENSMMUG00000055034) ENSMMUG00000045362 ENSMMUG00000056114 Pig-tailed macaque MODERN SPECIES 549 ENSMNEG00000039258 BCLAF3 (ENSMNEG00000044107) MAP7D2 (ENSMNEG00000042827) EIF1AX (ENSMNEG00000035197) RPS6KA3 (ENSMNEG00000013736) CNKSR2 (ENSMNEG00000033243) KLHL34 (ENSMNEG00000004752) SMPX (ENSMNEG00000044214) MBTPS2 (ENSMNEG00000018031) ENSMNEG00000036966 SMS (ENSMNEG00000030826) PHEX (ENSMNEG00000030561) PTCHD1 (ENSMNEG00000031256) PRDX4 (ENSMNEG00000030258) ACOT9 (ENSMNEG00000034251) SAT1 (ENSMNEG00000028507) ##22 ENSMNEG00000042646 APOO (ENSMNEG00000021703) CXorf58 (ENSMNEG00000045055) KLHL15 (ENSMNEG00000006144) ENSMNEG00000031395 ZFX (ENSMNEG00000045098) ENSMNEG00000001268 PDK3 (ENSMNEG00000044294) PCYT1B (ENSMNEG00000028533) POLA1 (ENSMNEG00000031890) ARX (ENSMNEG00000041141) ENSMNEG00000044162 ENSMNEG00000007228 Hominoidea ANCESTRAL SPECIES 16 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.ob.b ENSGT00940000157313 ENSGT00940000167221 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT00390000013549.a.b.b.d ENSGT00390000013549.a.b.b.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00940000163449 ENSGT00940000159951 Gibbon MODERN SPECIES 449 BCLAF3 (ENSNLEG00000009878) ENSNLEG00000009882 MAP7D2 (ENSNLEG00000009884) ENSNLEG00000009913 RPS6KA3 (ENSNLEG00000009925) CNKSR2 (ENSNLEG00000009933) SMPX (ENSNLEG00000009938) MBTPS2 (ENSNLEG00000009943) SMS (ENSNLEG00000009955) PHEX (ENSNLEG00000009980) ENSNLEG00000018743 ENSNLEG00000027485 PTCHD1 (ENSNLEG00000010004) PRDX4 (ENSNLEG00000029389) ACOT9 (ENSNLEG00000010007) SAT1 (ENSNLEG00000010015) ##22 ENSNLEG00000010026 KLHL15 (ENSNLEG00000010036) ENSNLEG00000028019 ZFX (ENSNLEG00000010044) PDK3 (ENSNLEG00000010056) PCYT1B (ENSNLEG00000033157) POLA1 (ENSNLEG00000010066) ENSNLEG00000036055 MAGEB18 (ENSNLEG00000010087) ENSNLEG00000030609 ENSNLEG00000027883 PPP4R3C (ENSNLEG00000036036) DCAF8L1 (ENSNLEG00000010088) IL1RAPL1 (ENSNLEG00000010091) MAGEB2 (ENSNLEG00000010095) Hominidae ANCESTRAL SPECIES 8 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.pb ENSGT00940000157313 ENSGT00940000167221 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT00390000013549.a.b.b.d ENSGT00390000013549.a.b.b.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00940000163449 ENSGT00940000159951 Orangutan MODERN SPECIES 242 MAP7D2 (ENSPPYG00000020175) EIF1AX (ENSPPYG00000038921) RPS6KA3 (ENSPPYG00000020177) CNKSR2 (ENSPPYG00000020178) KLHL34 (ENSPPYG00000020179) SMPX (ENSPPYG00000020180) MBTPS2 (ENSPPYG00000020181) SMS (ENSPPYG00000020182) PHEX (ENSPPYG00000020183) CBLL2 (ENSPPYG00000020184) ENSPPYG00000036724 DDX53 (ENSPPYG00000020185) PTCHD1 (ENSPPYG00000020187) ENSPPYG00000020188 ACOT9 (ENSPPYG00000020189) SAT1 (ENSPPYG00000020190) ##22 APOO (ENSPPYG00000020191) CXorf58 (ENSPPYG00000020192) KLHL15 (ENSPPYG00000034438) EIF2S3 (ENSPPYG00000020194) ZFX (ENSPPYG00000020195) ENSPPYG00000040833 SUPT20HL1 (ENSPPYG00000040934) PDK3 (ENSPPYG00000020198) PCYT1B (ENSPPYG00000020199) POLA1 (ENSPPYG00000020200) ARX (ENSPPYG00000035499) ENSPPYG00000033798 MAGEB18 (ENSPPYG00000020203) MAGEB5 (ENSPPYG00000020205) ENSPPYG00000020206 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.pb ENSGT00940000157313 ENSGT00940000167221 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT00390000013549.a.b.b.d ENSGT00390000013549.a.b.b.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00950000183014.f.a.g.b.a.b.a.b.a ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00940000163449 Gorilla MODERN SPECIES 523 MAP7D2 (ENSGGOG00000007760) ENSGGOG00000012186 RPS6KA3 (ENSGGOG00000008837) CNKSR2 (ENSGGOG00000013768) KLHL34 (ENSGGOG00000002780) SMPX (ENSGGOG00000004353) MBTPS2 (ENSGGOG00000012064) ENSGGOG00000003123 ENSGGOG00000003961 CBLL2 (ENSGGOG00000034821) ENSGGOG00000026912 ENSGGOG00000036181 PTCHD1 (ENSGGOG00000044059) PRDX4 (ENSGGOG00000026790) ACOT9 (ENSGGOG00000015401) SAT1 (ENSGGOG00000027873) ##22 APOO (ENSGGOG00000001200) CXorf58 (ENSGGOG00000016257) KLHL15 (ENSGGOG00000028200) EIF2S3 (ENSGGOG00000024609) ZFX (ENSGGOG00000004053) SUPT20HL2 (ENSGGOG00000022110) PDK3 (ENSGGOG00000006157) PCYT1B (ENSGGOG00000002402) POLA1 (ENSGGOG00000016072) ENSGGOG00000022441 ARX (ENSGGOG00000023361) ENSGGOG00000025838 METTL1 (ENSGGOG00000023724) ENSGGOG00000028052 MAGEB18 (ENSGGOG00000004000) Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00940000167584 ENSGT00870000136506.pb ENSGT00940000157313 ENSGT00940000167221 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT00390000013549.a.b.b.d ENSGT00390000013549.a.b.b.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00950000183014.f.a.g.b.a.b.a.b.a ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00940000163449 Pan ANCESTRAL SPECIES 6 ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00940000167584 ENSGT00870000136506.pb ENSGT00940000157313 ENSGT00940000166413 ENSGT00940000167221 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.h.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.h.d ENSGT00940000158684 ENSGT00390000013549.a.b.b.d ENSGT00390000013549.a.b.b.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00950000183014.f.a.g.b.a.b.a.b.a ENSGT00940000160633 ENSGT00950000183199.a.a.d ENSGT00390000017840.d ENSGT00940000163449 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 972 MAP7D2 (ENSPTRG00000021727) ENSPTRG00000021728 RPS6KA3 (ENSPTRG00000052293) CNKSR2 (ENSPTRG00000021731) KLHL34 (ENSPTRG00000021733) SMPX (ENSPTRG00000047975) MBTPS2 (ENSPTRG00000021735) ENSPTRG00000044028 PHEX (ENSPTRG00000021737) CBLL2 (ENSPTRG00000028314) ENSPTRG00000047608 DDX53 (ENSPTRG00000028313) PTCHD1 (ENSPTRG00000021738) PRDX4 (ENSPTRG00000049325) ACOT9 (ENSPTRG00000021740) ENSPTRG00000049093 ##22 APOO (ENSPTRG00000021742) CXorf58 (ENSPTRG00000048338) KLHL15 (ENSPTRG00000021744) ENSPTRG00000050342 ZFX (ENSPTRG00000021747) SUPT20HL2 (ENSPTRG00000049617) SUPT20HL1 (ENSPTRG00000045217) PDK3 (ENSPTRG00000021750) PCYT1B (ENSPTRG00000021752) POLA1 (ENSPTRG00000021753) ENSPTRG00000041347 ARX (ENSPTRG00000045701) ENSPTRG00000052410 ENSPTRG00000045518 ENSPTRG00000049505 Chimpanzee MODERN SPECIES 829 ENSPTRG00000044927 ENSPTRG00000021741 ##22 Bonobo MODERN SPECIES 369 EIF1AX (ENSPPAG00000033962) RPS6KA3 (ENSPPAG00000029748) CNKSR2 (ENSPPAG00000037182) KLHL34 (ENSPPAG00000025617) SMPX (ENSPPAG00000030194) MBTPS2 (ENSPPAG00000033207) YY2 (ENSPPAG00000033052) ENSPPAG00000035805 PHEX (ENSPPAG00000012368) CBLL2 (ENSPPAG00000006152) ENSPPAG00000031560 DDX53 (ENSPPAG00000006869) PTCHD1 (ENSPPAG00000013963) PRDX4 (ENSPPAG00000038998) ACOT9 (ENSPPAG00000037237) SAT1 (ENSPPAG00000035932) ##22 APOO (ENSPPAG00000033503) CXorf58 (ENSPPAG00000041195) KLHL15 (ENSPPAG00000040506) EIF2S3 (ENSPPAG00000035572) ZFX (ENSPPAG00000029493) SUPT20HL1 (ENSPPAG00000036411) ENSPPAG00000017273 PDK3 (ENSPPAG00000043604) PCYT1B (ENSPPAG00000028021) POLA1 (ENSPPAG00000042971) ENSPPAG00000015413 ENSPPAG00000018949 ENSPPAG00000033295 ENSPPAG00000018404 MAGEB18 (ENSPPAG00000015746) Human MODERN SPECIES 1827 MAP7D2 (ENSG00000184368) EIF1AX (ENSG00000173674) RPS6KA3 (ENSG00000177189) CNKSR2 (ENSG00000149970) KLHL34 (ENSG00000185915) SMPX (ENSG00000091482) MBTPS2 (ENSG00000012174) YY2 (ENSG00000230797) SMS (ENSG00000102172) PHEX (ENSG00000102174) CBLL2 (ENSG00000175809) DDX53 (ENSG00000184735) PTCHD1 (ENSG00000165186) PRDX4 (ENSG00000123131) ACOT9 (ENSG00000123130) SAT1 (ENSG00000130066) ##22 ENSG00000288706 APOO (ENSG00000184831) CXorf58 (ENSG00000165182) KLHL15 (ENSG00000174010) EIF2S3 (ENSG00000130741) ZFX (ENSG00000005889) SUPT20HL2 (ENSG00000223611) SUPT20HL1 (ENSG00000223731) PDK3 (ENSG00000067992) PCYT1B (ENSG00000102230) POLA1 (ENSG00000101868) ARX (ENSG00000004848) MAGEB18 (ENSG00000176774) MAGEB6B (ENSG00000232030) MAGEB6 (ENSG00000176746) Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000163033.a.b ENSGT00940000159951 ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b Eulipotyphla ANCESTRAL SPECIES 1189 ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 Hedgehog MODERN SPECIES 13992 SAT1 (ENSEEUG00000001856) ##22 Common shrew MODERN SPECIES 1678 ENSSARG00000012597 SAT1 (ENSSARG00000012612) ##22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b Artiodactyla ANCESTRAL SPECIES 9 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000013549.a.b.b.p ENSGT01090000260076.b.b ENSGT00940000155485.a.a ENSGT00940000164194 ENSGT00940000155485.a.b Suina ANCESTRAL SPECIES 41 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b Chacoan peccary MODERN SPECIES 108 ENSCWAG00000003521 CNKSR2 (ENSCWAG00000001474) KLHL34 (ENSCWAG00000001250) SMPX (ENSCWAG00000001235) MBTPS2 (ENSCWAG00000001211) SMS (ENSCWAG00000001179) PHEX (ENSCWAG00000001115) ENSCWAG00000001077 ENSCWAG00000001065 ENSCWAG00000001055 PRDX4 (ENSCWAG00000001029) ACOT9 (ENSCWAG00000000999) SAT1 (ENSCWAG00000000951) ##22 APOO (ENSCWAG00000000907) CXorf58 (ENSCWAG00000000844) KLHL15 (ENSCWAG00000000810) EIF2S3B (ENSCWAG00000000781) ENSCWAG00000000666 ENSCWAG00000000619 Pig MODERN SPECIES 300 MAP7D2 (ENSSSCG00000012161) EIF1AX (ENSSSCG00000032223) RPS6KA3 (ENSSSCG00000012163) ENSSSCG00000060065 CNKSR2 (ENSSSCG00000012164) KLHL34 (ENSSSCG00000033979) SMPX (ENSSSCG00000032720) ENSSSCG00000012165 SMS (ENSSSCG00000012166) PHEX (ENSSSCG00000012167) ENSSSCG00000012169 PTCHD1 (ENSSSCG00000032433) ENSSSCG00000045320 PRDX4 (ENSSSCG00000012171) ACOT9 (ENSSSCG00000012172) SAT1 (ENSSSCG00000012173) ##22 APOO (ENSSSCG00000012174) ENSSSCG00000012175 KLHL15 (ENSSSCG00000027652) ENSSSCG00000029857 ENSSSCG00000021322 ENSSSCG00000031803 ENSSSCG00000030735 PDK3 (ENSSSCG00000012181) PCYT1B (ENSSSCG00000012182) ENSSSCG00000031322 POLA1 (ENSSSCG00000022240) ARX (ENSSSCG00000020801) ENSSSCG00000044536 ENSSSCG00000045871 ENSSSCG00000045321 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000013549.a.b.b.o.b ENSGT01090000260076.b.b ENSGT00940000155485.a.a ENSGT00940000164194 ENSGT00940000155485.a.b Artiodactyla_b ANCESTRAL SPECIES 24 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000013549.a.b.b.o.b ENSGT01090000260076.b.b ENSGT00940000155485.a.a ENSGT00940000164194 ENSGT00940000155485.a.b Pecora ANCESTRAL SPECIES 34 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156832.p.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000013549.a.b.b.o.b ENSGT01090000260076.b.b ENSGT00940000155485.a.a.a.b ENSGT00940000164194 ENSGT00940000155485.a.b.e Percora_a ANCESTRAL SPECIES 22 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156832.p.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.g ENSGT00390000013549.a.b.b.o.a.h ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b ENSGT00940000163797.a.b ENSGT00940000163797.a.a Bovidae ANCESTRAL SPECIES 23 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156832.p.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.g.b ENSGT00390000013549.a.b.b.o.a.h ENSGT00390000013549.a.b.b.o.a.g.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163797.a.b ENSGT00940000163797.a.a ENSGT00940000165324 Caprinae ANCESTRAL SPECIES 46 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156832.p.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b.d ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.g.b ENSGT00390000013549.a.b.b.o.a.h ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000159951.d.b.b.b.a.b ENSGT00940000163033.a.b ENSGT00940000159951.d.b.a ENSGT00940000159951.d.a.a Goat MODERN SPECIES 29 ENSCHIG00000021471 RPS6KA3 (ENSCHIG00000022418) ENSCHIG00000019442 ENSCHIG00000012004 CNKSR2 (ENSCHIG00000017548) KLHL34 (ENSCHIG00000019743) ENSCHIG00000007896 SMPX (ENSCHIG00000017409) MBTPS2 (ENSCHIG00000023780) SMS (ENSCHIG00000007086) PHEX (ENSCHIG00000007176) ENSCHIG00000020582 PTCHD1 (ENSCHIG00000005349) PRDX4 (ENSCHIG00000022629) ACOT9 (ENSCHIG00000023923) SAT1 (ENSCHIG00000016851) ##22 APOO (ENSCHIG00000012782) CXorf58 (ENSCHIG00000003756) KLHL15 (ENSCHIG00000021632) ENSCHIG00000003159 ENSCHIG00000012263 ENSCHIG00000006725 ENSCHIG00000011069 PCYT1B (ENSCHIG00000011725) ENSCHIG00000019937 POLA1 (ENSCHIG00000016890) ARX (ENSCHIG00000007687) ENSCHIG00000011833 ENSCHIG00000003458 ENSCHIG00000009810 ENSCHIG00000017424 Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020016661 ENSOARG00020016684 ENSOARG00020016703 ENSOARG00020016721 ENSOARG00020016730 CNKSR2 (ENSOARG00020016850) KLHL34 (ENSOARG00020022568) SMPX (ENSOARG00020022580) MBTPS2 (ENSOARG00020022610) ENSOARG00020022678 PHEX (ENSOARG00020022712) ENSOARG00020022764 PTCHD1 (ENSOARG00020022806) PRDX4 (ENSOARG00020022836) ENSOARG00020022862 SAT1 (ENSOARG00020022994) ##22 APOO (ENSOARG00020023078) CXorf58 (ENSOARG00020023099) KLHL15 (ENSOARG00020023131) EIF2S3 (ENSOARG00020023139) ZFX (ENSOARG00020023181) ENSOARG00020023370 ENSOARG00020023420 PDK3 (ENSOARG00020023453) PCYT1B (ENSOARG00020023537) POLA1 (ENSOARG00020023737) ARX (ENSOARG00020024312) ENSOARG00020024326 ENSOARG00020015275 ENSOARG00020015280 ENSOARG00020015337 Bovinae ANCESTRAL SPECIES 32 ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156832.p.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00940000167584 ENSGT00870000136506 ENSGT00940000157313 ENSGT00950000185346 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.g.b ENSGT00390000013549.a.b.b.o.a.g.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00950000183066.a.a.a.d.c ENSGT00940000163449 ENSGT00940000159951.d.a.b ENSGT00390000018199.b.b.b Bos ANCESTRAL SPECIES 32 ENSGT00390000009113.a.a.l ENSGT00940000156832.p.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00940000167584 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000154451.l.b.b.a.a.b ENSGT00950000185346 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.g.b ENSGT00390000013549.a.b.b.o.a.g.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01030000235726 ENSGT00950000183066.a.a.a.d.c ENSGT00940000163449 ENSGT00940000159951.d.a.a.a.b.b.a Bos_b ANCESTRAL SPECIES 39 ENSGT00940000159370 ENSGT00390000009113.a.a.l ENSGT00940000156832.p.b ENSGT00940000156709 ENSGT00390000017542 ENSGT00510000048066 ENSGT00940000154451.l.b.b.a.a.b ENSGT00940000167584 ENSGT00870000136506 ENSGT00940000157313 ENSGT00950000185346 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.g.b ENSGT00390000018433.s.a.b.b ENSGT00390000013549.a.b.b.o.a.g.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01030000235726 ENSGT00950000183066.a.a.a.d.d ENSGT00950000183066.a.a.a.d.c Cow MODERN SPECIES 177 RPS6KA3 (ENSBTAG00000017639) ENSBTAG00000047699 ENSBTAG00000050929 ENSBTAG00000013625 CNKSR2 (ENSBTAG00000044202) SMPX (ENSBTAG00000015204) MBTPS2 (ENSBTAG00000008183) SMS (ENSBTAG00000018382) ENSBTAG00000052700 PHEX (ENSBTAG00000000419) ENSBTAG00000049480 ENSBTAG00000046635 PTCHD1 (ENSBTAG00000020987) PRDX4 (ENSBTAG00000006165) ACOT9 (ENSBTAG00000011258) SAT1 (ENSBTAG00000017363) ##22 APOO (ENSBTAG00000010937) CXHXorf58 (ENSBTAG00000010939) KLHL15 (ENSBTAG00000020561) EIF2S3 (ENSBTAG00000014337) ZFX (ENSBTAG00000007730) ENSBTAG00000006383 ENSBTAG00000006384 PDK3 (ENSBTAG00000017832) PCYT1B (ENSBTAG00000016107) POLA1 (ENSBTAG00000008170) ARX (ENSBTAG00000050504) ENSBTAG00000048848 ENSBTAG00000053624 ENSBTAG00000018583 ENSBTAG00000053213 Hybrid Bos Indicus MODERN SPECIES 315 ENSBIXG00005024903 ENSBIXG00005024880 ENSBIXG00005024836 CNKSR2 (ENSBIXG00005024732) SMPX (ENSBIXG00005024419) MBTPS2 (ENSBIXG00005024353) ENSBIXG00005024303 SMS (ENSBIXG00005024286) PHEX (ENSBIXG00005024241) ENSBIXG00005024121 ENSBIXG00005024079 ENSBIXG00005024020 PTCHD1 (ENSBIXG00005023943) PRDX4 (ENSBIXG00005023849) ACOT9 (ENSBIXG00005023796) SAT1 (ENSBIXG00005023734) ##22 ENSBIXG00005006902 APOO (ENSBIXG00005023656) CXorf58 (ENSBIXG00005023583) KLHL15 (ENSBIXG00005023551) ENSBIXG00005004027 ENSBIXG00005023490 ENSBIXG00005023233 ENSBIXG00005023185 ENSBIXG00005003945 PDK3 (ENSBIXG00005023130) PCYT1B (ENSBIXG00005023067) POLA1 (ENSBIXG00005022900) ENSBIXG00005003841 ARX (ENSBIXG00005022524) ENSBIXG00005022491 Bos_a ANCESTRAL SPECIES 63 ENSGT00940000159370 ENSGT00390000009113.a.a.l ENSGT00940000156832.p.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00940000154451.l.b.b.a.a.b ENSGT00940000167584 ENSGT00870000136506 ENSGT00940000157313 ENSGT00950000185346 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.g.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01030000235726 ENSGT00950000183066.a.a.a.d.c ENSGT00940000163449 ENSGT00940000159951.c ENSGT00940000159951.d.a.b Domestic yak MODERN SPECIES 69 CNKSR2 (ENSBGRG00000009403) KLHL34 (ENSBGRG00000009352) SMPX (ENSBGRG00000009309) ENSBGRG00000009234 MBTPS2 (ENSBGRG00000009064) ENSBGRG00000009009 SMS (ENSBGRG00000008940) ENSBGRG00000008920 ENSBGRG00000008903 PHEX (ENSBGRG00000008681) ENSBGRG00000008641 ENSBGRG00000008530 PTCHD1 (ENSBGRG00000008455) PRDX4 (ENSBGRG00000008322) ACOT9 (ENSBGRG00000007829) SAT1 (ENSBGRG00000007508) ##22 APOO (ENSBGRG00000007291) CXorf58 (ENSBGRG00000007185) KLHL15 (ENSBGRG00000007139) EIF2S3B (ENSBGRG00000013285) ENSBGRG00000013264 ENSBGRG00000013130 ENSBGRG00000013098 ENSBGRG00000013049 ENSBGRG00000013035 ENSBGRG00000013003 PDK3 (ENSBGRG00000012643) PCYT1B (ENSBGRG00000012447) ENSBGRG00000012409 POLA1 (ENSBGRG00000011903) ARX (ENSBGRG00000011822) Wild yak MODERN SPECIES 1595 PRDX4 (ENSBMUG00000022170) ACOT9 (ENSBMUG00000022159) SAT1 (ENSBMUG00000022122) ##22 APOO (ENSBMUG00000022096) CXorf58 (ENSBMUG00000022082) KLHL15 (ENSBMUG00000022056) EIF2S3B (ENSBMUG00000022041) ENSBMUG00000021995 ENSBMUG00000021952 ENSBMUG00000021939 PDK3 (ENSBMUG00000021928) American bison MODERN SPECIES 1903 SAT1 (ENSBBBG00000019813) ##22 Siberian musk deer MODERN SPECIES 38 ENSMMSG00000006320 ENSMMSG00000006281 PTCHD1 (ENSMMSG00000006252) PRDX4 (ENSMMSG00000006226) ACOT9 (ENSMMSG00000006174) SAT1 (ENSMMSG00000006125) ##22 APOO (ENSMMSG00000006095) CXorf58 (ENSMMSG00000006078) KLHL15 (ENSMMSG00000006065) ENSMMSG00000006024 ENSMMSG00000005815 ENSMMSG00000005744 ENSMMSG00000005719 PDK3 (ENSMMSG00000005687) PCYT1B (ENSMMSG00000005618) POLA1 (ENSMMSG00000005340) ARX (ENSMMSG00000005288) ENSMMSG00000005274 ENSMMSG00000005237 ENSMMSG00000005207 ENSMMSG00000005166 Yarkand deer MODERN SPECIES 1323 RPS6KA3 (ENSCHYG00000023911) ENSCHYG00000023852 ENSCHYG00000023829 CNKSR2 (ENSCHYG00000023268) KLHL34 (ENSCHYG00000023198) SMPX (ENSCHYG00000023180) MBTPS2 (ENSCHYG00000023135) ENSCHYG00000023111 SMS (ENSCHYG00000022994) PHEX (ENSCHYG00000022869) ENSCHYG00000022855 DDX53 (ENSCHYG00000022828) PTCHD1 (ENSCHYG00000022778) PRDX4 (ENSCHYG00000022660) ACOT9 (ENSCHYG00000022508) SAT1 (ENSCHYG00000022252) ##22 ENSCHYG00000022067 ENSCHYG00000022034 CXorf58 (ENSCHYG00000021993) KLHL15 (ENSCHYG00000021965) ENSCHYG00000021852 ENSCHYG00000021722 ENSCHYG00000021657 ENSCHYG00000021461 PCYT1B (ENSCHYG00000021141) POLA1 (ENSCHYG00000019524) ENSCHYG00000019382 MAGEB18 (ENSCHYG00000019310) ENSCHYG00000019249 ENSCHYG00000019208 ENSCHYG00000019135 Cetacea ANCESTRAL SPECIES 21 ENSGT01010000222890.b ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00390000009724.l.y.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.r ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00950000183087.A.a.a.b.o.a ENSGT00510000048637 ENSGT00940000159116 ENSGT01100000263525.a.b.b.c.a ENSGT00550000074801.h.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000017515.o.a.x.a ENSGT00940000163449 ENSGT00940000159951 Blue whale MODERN SPECIES 40 CNKSR2 (ENSBMSG00010015971) KLHL34 (ENSBMSG00010021180) SMPX (ENSBMSG00010021188) ENSBMSG00010021193 ENSBMSG00010021206 PHEX (ENSBMSG00010021225) ENSBMSG00010021244 ENSBMSG00010021247 ENSBMSG00010021259 ENSBMSG00010021262 ENSBMSG00010021269 PTCHD1 (ENSBMSG00010021280) PRDX4 (ENSBMSG00010021294) ENSBMSG00010021309 ENSBMSG00010021329 SAT1 (ENSBMSG00010021343) ##22 APOO (ENSBMSG00010021360) ENSBMSG00010021365 CXorf58 (ENSBMSG00010021372) KLHL15 (ENSBMSG00010021380) ENSBMSG00010021384 EIF2S3 (ENSBMSG00010021391) ENSBMSG00010021408 ENSBMSG00010021421 ENSBMSG00010021424 PDK3 (ENSBMSG00010021431) PCYT1B (ENSBMSG00010021451) POLA1 (ENSBMSG00010021507) ARX (ENSBMSG00010021534) ENSBMSG00010021537 ENSBMSG00010021542 Odontoceti ANCESTRAL SPECIES 22 ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164207 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.r ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00950000183087.A.a.a.b.o.a ENSGT00510000048637 ENSGT00940000159116 ENSGT01100000263525.a.b.b.c.a ENSGT00550000074801.h.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000017515.o.a.x.a ENSGT00940000163449 ENSGT00940000159951 Sperm whale MODERN SPECIES 13 RPS6KA3 (ENSPCTG00005013127) ENSPCTG00005013565 ENSPCTG00005013591 CNKSR2 (ENSPCTG00005013662) KLHL34 (ENSPCTG00005014125) SMPX (ENSPCTG00005014144) ENSPCTG00005014208 SMS (ENSPCTG00005014394) PHEX (ENSPCTG00005014479) ENSPCTG00005014734 ENSPCTG00005014773 ENSPCTG00005015143 PTCHD1 (ENSPCTG00005015207) PRDX4 (ENSPCTG00005015287) ACOT9 (ENSPCTG00005015365) SAT1 (ENSPCTG00005015519) ##22 APOO (ENSPCTG00005015655) ENSPCTG00005015710 CXorf58 (ENSPCTG00005015774) KLHL15 (ENSPCTG00005015891) ENSPCTG00005015923 EIF2S3 (ENSPCTG00005015958) ENSPCTG00005016340 ZFX (ENSPCTG00005016407) ENSPCTG00005016632 PDK3 (ENSPCTG00005016662) PCYT1B (ENSPCTG00005016720) POLA1 (ENSPCTG00005016852) ARX (ENSPCTG00005017760) ENSPCTG00005017881 ENSPCTG00005018023 Odontoceti_a ANCESTRAL SPECIES 20 ENSGT00390000008256 ENSGT00940000159370 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164207 ENSGT00390000008610.a.b.a.a.a ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.r ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT01100000263525.a.b.b.c.a ENSGT00550000074801.h.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000017515.o.a.x.a ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b Odontoceti_b ANCESTRAL SPECIES 22 ENSGT00390000008256 ENSGT00940000159370 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00940000172088 ENSGT00940000157313 ENSGT00940000164207 ENSGT00390000008610.a.b.a.a.a ENSGT00940000159407.n ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.r ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT01100000263525.a.b.b.c.a ENSGT00550000074801.h.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260381 ENSGT00940000159951.e.b.b ENSGT00940000163449 ENSGT00940000159951.e.a.b Monodontidae ANCESTRAL SPECIES 30 ENSGT00940000159370 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00940000172088 ENSGT00940000157313 ENSGT00940000164207 ENSGT00390000008610.a.b.a.a.a ENSGT00940000159407.n ENSGT00940000159951.e.b.b.b ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.r ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT01100000263525.a.b.b.c.a ENSGT00550000074801.h.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000017515.o.a.x.a ENSGT01090000260381 ENSGT00940000163449 ENSGT00940000163033.a.b Narwhal MODERN SPECIES 309 ENSMMNG00015011934 CNKSR2 (ENSMMNG00015012238) KLHL34 (ENSMMNG00015012985) SMPX (ENSMMNG00015012992) ENSMMNG00015012997 MBTPS2 (ENSMMNG00015013011) ENSMMNG00015013042 ENSMMNG00015013065 PHEX (ENSMMNG00015013104) ENSMMNG00015013143 ENSMMNG00015013158 ENSMMNG00015013169 PTCHD1 (ENSMMNG00015013178) PRDX4 (ENSMMNG00015013185) ACOT9 (ENSMMNG00015013205) SAT1 (ENSMMNG00015013236) ##22 APOO (ENSMMNG00015013272) ENSMMNG00015013284 CXorf58 (ENSMMNG00015013294) KLHL15 (ENSMMNG00015013307) GNG5B (ENSMMNG00015013314) EIF2S3 (ENSMMNG00015013327) ENSMMNG00015013361 ENSMMNG00015013392 PDK3 (ENSMMNG00015013411) PCYT1B (ENSMMNG00015013436) ENSMMNG00015013468 POLA1 (ENSMMNG00015013510) ARX (ENSMMNG00015013628) ENSMMNG00015013637 MAGEB18 (ENSMMNG00015013647) Beluga whale MODERN SPECIES 41 ENSDLEG00000021028 CNKSR2 (ENSDLEG00000021034) SMPX (ENSDLEG00000021052) ENSDLEG00000021055 MBTPS2 (ENSDLEG00000021061) SMS (ENSDLEG00000021074) PHEX (ENSDLEG00000003589) ENSDLEG00000003596 ENSDLEG00000003601 ENSDLEG00000003610 ENSDLEG00000003616 PTCHD1 (ENSDLEG00000003624) PRDX4 (ENSDLEG00000003633) ENSDLEG00000003639 ENSDLEG00000003653 SAT1 (ENSDLEG00000003657) ##22 APOO (ENSDLEG00000003665) CUNHXorf58 (ENSDLEG00000003672) KLHL15 (ENSDLEG00000003676) GNG5B (ENSDLEG00000003682) EIF2S3 (ENSDLEG00000003688) ZFX (ENSDLEG00000003710) ENSDLEG00000003734 ENSDLEG00000003740 PDK3 (ENSDLEG00000003748) PCYT1B (ENSDLEG00000003770) POLA1 (ENSDLEG00000003803) ARX (ENSDLEG00000003847) ENSDLEG00000003854 ENSDLEG00000003858 ENSDLEG00000003867 Vaquita MODERN SPECIES 34 KLHL34 (ENSPSNG00000022394) SMPX (ENSPSNG00000022398) ENSPSNG00000022401 ENSPSNG00000022411 ENSPSNG00000022423 PHEX (ENSPSNG00000022431) ENSPSNG00000022444 ENSPSNG00000022447 ENSPSNG00000022455 ENSPSNG00000022459 ENSPSNG00000022464 ENSPSNG00000022466 PTCHD1 (ENSPSNG00000022471) PRDX4 (ENSPSNG00000022478) ACOT9 (ENSPSNG00000022488) SAT1 (ENSPSNG00000022498) ##22 APOO (ENSPSNG00000022508) CXorf58 (ENSPSNG00000013347) KLHL15 (ENSPSNG00000013480) ENSPSNG00000013529 EIF2S3 (ENSPSNG00000013588) ENSPSNG00000013747 ENSPSNG00000014119 ENSPSNG00000014200 PDK3 (ENSPSNG00000014296) PCYT1B (ENSPSNG00000014419) POLA1 (ENSPSNG00000014536) ARX (ENSPSNG00000014723) ENSPSNG00000014866 ENSPSNG00000014978 ENSPSNG00000015028 Dolphin MODERN SPECIES 129 PRDX4 (ENSTTRG00000012368) ACOT9 (ENSTTRG00000012385) SAT1 (ENSTTRG00000012421) ##22 APOO (ENSTTRG00000012442) CXorf58 (ENSTTRG00000012453) KLHL15 (ENSTTRG00000012468) EIF2S3 (ENSTTRG00000012474) ZFX (ENSTTRG00000012488) Camelidae ANCESTRAL SPECIES 59 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00510000047522 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000159951 ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b ENSGT01090000260076.b.b ENSGT00390000015719.d Arabian camel MODERN SPECIES 204 MAP7D2 (ENSCDRG00005021545) EIF1AX (ENSCDRG00005021559) RPS6KA3 (ENSCDRG00005021577) CNKSR2 (ENSCDRG00005021599) KLHL34 (ENSCDRG00005021612) SMPX (ENSCDRG00005021613) ENSCDRG00005021614 MBTPS2 (ENSCDRG00005021615) SMS (ENSCDRG00005021617) PHEX (ENSCDRG00005021620) ENSCDRG00005021631 PTCHD1 (ENSCDRG00005021635) ENSCDRG00005021636 PRDX4 (ENSCDRG00005021642) ACOT9 (ENSCDRG00005021651) SAT1 (ENSCDRG00005021657) ##22 ENSCDRG00005021660 ENSCDRG00005021662 KLHL15 (ENSCDRG00005021665) EIF2S3B (ENSCDRG00005021667) ENSCDRG00005021670 ENSCDRG00005021680 ENSCDRG00005021684 PDK3 (ENSCDRG00005021688) PCYT1B (ENSCDRG00005021697) POLA1 (ENSCDRG00005021708) ENSCDRG00005021722 ENSCDRG00005008930 PPP4R3C (ENSCDRG00005009000) ENSCDRG00005009046 IL1RAPL1 (ENSCDRG00005009133) Alpaca MODERN SPECIES 165 PRDX4 (ENSVPAG00000010666) ACOT9 (ENSVPAG00000010667) ENSVPAG00000010668 ##22 APOO (ENSVPAG00000010669) CXorf58 (ENSVPAG00000010670) KLHL15 (ENSVPAG00000010671) EIF2S3B (ENSVPAG00000010672) Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b ENSGT00940000163797.a.b Equus ANCESTRAL SPECIES 48 ENSGT01090000261388 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00940000167584.b ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b ENSGT00940000163797.a.b Horse MODERN SPECIES 480 RPS6KA3 (ENSECAG00000011322) ENSECAG00000047809 ENSECAG00000049869 CNKSR2 (ENSECAG00000000149) ENSECAG00000044474 KLHL34 (ENSECAG00000018669) SMPX (ENSECAG00000058470) MBTPS2 (ENSECAG00000000437) SMS (ENSECAG00000017447) PHEX (ENSECAG00000011455) DDX53 (ENSECAG00000043882) PTCHD1 (ENSECAG00000009607) PRDX4 (ENSECAG00000010085) ACOT9 (ENSECAG00000019023) APOO (ENSECAG00000013441) SAT1 (ENSECAG00000021968) ##22 CXHXorf58 (ENSECAG00000015537) KLHL15 (ENSECAG00000015946) EIF2S3B (ENSECAG00000017343) ZFX (ENSECAG00000025018) ENSECAG00000045952 ENSECAG00000047622 PDK3 (ENSECAG00000010080) PCYT1B (ENSECAG00000009444) POLA1 (ENSECAG00000013090) ARX (ENSECAG00000037496) MAGEB18 (ENSECAG00000001106) ENSECAG00000001231 MAGEB5 (ENSECAG00000001528) ENSECAG00000013015 ENSECAG00000038888 Donkey MODERN SPECIES 36 ENSEASG00005014696 MAP7D2 (ENSEASG00005014697) EIF1AX (ENSEASG00005009834) RPS6KA3 (ENSEASG00005014705) CNKSR2 (ENSEASG00005007178) KLHL34 (ENSEASG00005037044) SMPX (ENSEASG00005007668) ENSEASG00005020041 SMS (ENSEASG00005020046) PHEX (ENSEASG00005023744) ENSEASG00005037356 ENSEASG00005034757 PTCHD1 (ENSEASG00005032723) PRDX4 (ENSEASG00005004804) ACOT9 (ENSEASG00005004784) SAT1 (ENSEASG00005026493) ##22 APOO (ENSEASG00005004773) CXorf58 (ENSEASG00005004770) ENSEASG00005017768 ENSEASG00005002243 ENSEASG00005038128 ENSEASG00005037676 ENSEASG00005017758 PDK3 (ENSEASG00005017721) PCYT1B (ENSEASG00005017714) POLA1 (ENSEASG00005017209) ARX (ENSEASG00005029809) MAGEB18 (ENSEASG00005000411) ENSEASG00005000355 ENSEASG00005006949 ENSEASG00005029147 Chiroptera ANCESTRAL SPECIES 25 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Microchiroptera ANCESTRAL SPECIES 25 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 21 ENSRFEG00010003796 QRSL1 (ENSRFEG00010003777) CRYBG1 (ENSRFEG00010003739) ENSRFEG00010003711 RTN4IP1 (ENSRFEG00010003684) PRDM1 (ENSRFEG00010003594) ATG5 (ENSRFEG00010003510) PREP (ENSRFEG00010003440) POPDC3 (ENSRFEG00010003422) BVES (ENSRFEG00010003402) LIN28B (ENSRFEG00010003383) HACE1 (ENSRFEG00010003307) ENSRFEG00010003252 ENSRFEG00010003239 GRIK2 (ENSRFEG00010003101) ENSRFEG00010003009 ##22 ASCC3 (ENSRFEG00010002943) SIM1 (ENSRFEG00010002901) MCHR2 (ENSRFEG00010002876) PRDM13 (ENSRFEG00010002847) CCNC (ENSRFEG00010002800) ENSRFEG00010002763 USP45 (ENSRFEG00010002705) ENSRFEG00010002660 PNISR (ENSRFEG00010002631) COQ3 (ENSRFEG00010002591) FAXC (ENSRFEG00010002564) FBXL4 (ENSRFEG00010002537) POU3F2 (ENSRFEG00010002524) ENSRFEG00010002515 ENSRFEG00010002509 Greater horseshoe bat MODERN SPECIES CNKSR2 (ENSRFEG00010007889) KLHL34 (ENSRFEG00010007846) SMPX (ENSRFEG00010007815) ENSRFEG00010007751 MBTPS2 (ENSRFEG00010007702) ENSRFEG00010007656 PHEX (ENSRFEG00010007442) ENSRFEG00010007428 ENSRFEG00010007348 ENSRFEG00010003306 ENSRFEG00010003295 PTCHD1 (ENSRFEG00010003276) PRDX4 (ENSRFEG00010003215) ENSRFEG00010003192 ACOT9 (ENSRFEG00010003128) ENSRFEG00010003083 ##22 APOO (ENSRFEG00010003049) ENSRFEG00010003025 KLHL15 (ENSRFEG00010003004) EIF2S3B (ENSRFEG00010002976) ENSRFEG00010002885 ENSRFEG00010002823 ENSRFEG00010002810 ENSRFEG00010002799 ENSRFEG00010002718 ENSRFEG00010002620 ENSRFEG00010002609 PDK3 (ENSRFEG00010002578) PCYT1B (ENSRFEG00010002551) POLA1 (ENSRFEG00010002285) ARX (ENSRFEG00010002203) Microbat DUPLICATION Microbat MODERN SPECIES 957 CNKSR2 (ENSMLUG00000004159) SMPX (ENSMLUG00000004177) MBTPS2 (ENSMLUG00000013179) ENSMLUG00000025014 ENSMLUG00000013185 PHEX (ENSMLUG00000013196) ENSMLUG00000022233 PTCHD1 (ENSMLUG00000010976) ENSMLUG00000015445 PRDX4 (ENSMLUG00000004904) ENSMLUG00000004909 ENSMLUG00000004919 ##22 APOO (ENSMLUG00000004925) ENSMLUG00000001671 KLHL15 (ENSMLUG00000001675) EIF2S3B (ENSMLUG00000012424) ENSMLUG00000003962 ENSMLUG00000024661 ENSMLUG00000028600 ENSMLUG00000029461 ENSMLUG00000004525 PCYT1B (ENSMLUG00000004532) POLA1 (ENSMLUG00000004537) ENSMLUG00000022745 MAGEB18 (ENSMLUG00000005309) ENSMLUG00000024423 ENSMLUG00000008009 ##22 Microbat MODERN SPECIES 957 ENSMLUG00000024600 ENSMLUG00000013249 ENSMLUG00000013243 ENSMLUG00000027796 NR0B1 (ENSMLUG00000003238) MAGEB3 (ENSMLUG00000013246) ENSMLUG00000001007 IL1RAPL1 (ENSMLUG00000011609) ENSMLUG00000011637 ENSMLUG00000010720 ENSMLUG00000016106 ENSMLUG00000022187 ENSMLUG00000029898 ENSMLUG00000027726 ENSMLUG00000030314 ENSMLUG00000008009 ##22 ENSMLUG00000024423 MAGEB18 (ENSMLUG00000005309) ENSMLUG00000022745 POLA1 (ENSMLUG00000004537) PCYT1B (ENSMLUG00000004532) ENSMLUG00000004525 ENSMLUG00000029461 ENSMLUG00000028600 ENSMLUG00000024661 ENSMLUG00000003962 EIF2S3B (ENSMLUG00000012424) KLHL15 (ENSMLUG00000001675) ENSMLUG00000001671 APOO (ENSMLUG00000004925) ENSMLUG00000004919 ##22 Megabat MODERN SPECIES 291 PRDX4 (ENSPVAG00000002527) ACOT9 (ENSPVAG00000002528) SAT1 (ENSPVAG00000002529) ##22 APOO (ENSPVAG00000002530) CXorf58 (ENSPVAG00000002531) KLHL15 (ENSPVAG00000002532) ENSPVAG00000002533 ENSPVAG00000002534 Carnivora ANCESTRAL SPECIES 11 ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Felidae DUPLICATION Felidae DUPLICATION Felidae ANCESTRAL SPECIES 12 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00990000213085 ENSGT00390000018687 ENSGT00940000153680.a ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000165217 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.o.a ##22 ENSGT00530000063666.b.`b.a ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01030000234553.b.b.d.c.a.a.a ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b Panthera ANCESTRAL SPECIES 49 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00990000213085 ENSGT00390000018687 ENSGT00940000153680.a ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000165217 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.o.a ##22 ENSGT00530000063666.b.`b.a ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01030000234553.b.b.d.c.a.a.a ENSGT00940000163449 ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b ENSGT00940000153117.B.c.b Tiger MODERN SPECIES 272 CNKSR2 (ENSPTIG00000015484) SMPX (ENSPTIG00000018470) MBTPS2 (ENSPTIG00000018622) SMS (ENSPTIG00000019333) PHEX (ENSPTIG00000019600) ENSPTIG00000020818 ENSPTIG00000001243 PTCHD1 (ENSPTIG00000002214) ENSPTIG00000001274 PRDX4 (ENSPTIG00000003976) ACOT9 (ENSPTIG00000006318) SAT1 (ENSPTIG00000009020) ##22 APOO (ENSPTIG00000010150) CXorf58 (ENSPTIG00000010347) KLHL15 (ENSPTIG00000010552) ENSPTIG00000010749 ENSPTIG00000011251 PDK3 (ENSPTIG00000011883) PCYT1B (ENSPTIG00000012859) POLA1 (ENSPTIG00000013657) ZMYM5 (ENSPTIG00000016752) PSPC1 (ENSPTIG00000016917) MPHOSPH8 (ENSPTIG00000017801) ENSPTIG00000020885 ENSPTIG00000021432 RNF17 (ENSPTIG00000001738) ATP12A (ENSPTIG00000006912) Panthera_a ANCESTRAL SPECIES 55 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00990000213085 ENSGT00390000018687 ENSGT00940000153680.a ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000165217 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.o.a ##22 ENSGT00530000063666.b.`b.a ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.a.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01030000234553.b.b.d.c.a.a.a ENSGT00940000163449 ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b ENSGT00950000182900.D.d.b lion MODERN SPECIES 88 MAGEB18 (ENSPLOG00000021266) CNKSR2 (ENSPLOG00000012305) KLHL34 (ENSPLOG00000014853) SMPX (ENSPLOG00000014882) MBTPS2 (ENSPLOG00000014935) SMS (ENSPLOG00000015023) PHEX (ENSPLOG00000015087) ENSPLOG00000015143 ENSPLOG00000015179 PTCHD1 (ENSPLOG00000015269) ENSPLOG00000015323 ENSPLOG00000015346 ENSPLOG00000015426 PRDX4 (ENSPLOG00000015540) ACOT9 (ENSPLOG00000015598) ENSPLOG00000015830 ##22 ENSPLOG00000015898 CXorf58 (ENSPLOG00000015933) KLHL15 (ENSPLOG00000016023) EIF2S3B (ENSPLOG00000016060) ENSPLOG00000016226 ENSPLOG00000016401 ENSPLOG00000016446 PDK3 (ENSPLOG00000016559) PCYT1B (ENSPLOG00000016632) POLA1 (ENSPLOG00000016946) ARX (ENSPLOG00000017861) ENSPLOG00000017948 ENSPLOG00000018008 ENSPLOG00000018034 ARSL (ENSPLOG00000018103) leopard MODERN SPECIES 153 KLHL34 (ENSPPRG00000011348) SMPX (ENSPPRG00000020949) MBTPS2 (ENSPPRG00000020866) ENSPPRG00000019829 PHEX (ENSPPRG00000019320) ENSPPRG00000019177 ENSPPRG00000011327 PTCHD1 (ENSPPRG00000018462) ENSPPRG00000018445 PRDX4 (ENSPPRG00000017851) ACOT9 (ENSPPRG00000017730) ENSPPRG00000016527 ##22 ENSPPRG00000016333 CXorf58 (ENSPPRG00000016286) ENSPPRG00000016210 KLHL15 (ENSPPRG00000016181) EIF2S3B (ENSPPRG00000016127) ENSPPRG00000016030 ENSPPRG00000015195 Cat MODERN SPECIES 252 ENSFCAG00000049761 CNKSR2 (ENSFCAG00000026807) SMPX (ENSFCAG00000037718) MBTPS2 (ENSFCAG00000029861) SMS (ENSFCAG00000002434) PHEX (ENSFCAG00000023221) ENSFCAG00000051651 ENSFCAG00000038497 ENSFCAG00000049112 PTCHD1 (ENSFCAG00000031503) ENSFCAG00000034636 ENSFCAG00000032644 ENSFCAG00000033776 PRDX4 (ENSFCAG00000004028) ACOT9 (ENSFCAG00000004030) ENSFCAG00000004032 ##22 APOO (ENSFCAG00000000029) CXHXorf58 (ENSFCAG00000000030) KLHL15 (ENSFCAG00000022049) EIF2S3B (ENSFCAG00000006477) ENSFCAG00000010544 ENSFCAG00000046687 ENSFCAG00000034247 PDK3 (ENSFCAG00000002134) PCYT1B (ENSFCAG00000002136) POLA1 (ENSFCAG00000002138) ARX (ENSFCAG00000045199) FELCATV1R3 (ENSFCAG00000031841) MAGEB18 (ENSFCAG00000041348) ENSFCAG00000050011 ENSFCAG00000051016 Felidae ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.b.o.b ##22 Panthera ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.b.o.b ##22 Panthera_a ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.b.o.b ##22 leopard MODERN SPECIES 62 ENSPPRG00000021997 ENSPPRG00000009975 ADGRL2 (ENSPPRG00000009129) ENSPPRG00000024293 TTLL7 (ENSPPRG00000024394) PRKACB (ENSPPRG00000015792) ENSPPRG00000021431 ENSPPRG00000010565 ENSPPRG00000010285 ENSPPRG00000010218 ENSPPRG00000009883 RPF1 (ENSPPRG00000009777) GNG5 (ENSPPRG00000009563) SPATA1 (ENSPPRG00000009258) CTBS (ENSPPRG00000008795) ENSPPRG00000008708 ##22 SSX2IP (ENSPPRG00000008492) LPAR3 (ENSPPRG00000006969) MCOLN2 (ENSPPRG00000006914) MCOLN3 (ENSPPRG00000006193) DNAI3 (ENSPPRG00000004873) SYDE2 (ENSPPRG00000002218) C1orf52 (ENSPPRG00000001522) BCL10 (ENSPPRG00000000878) DDAH1 (ENSPPRG00000000442) ENSPPRG00000021077 CCN1 (ENSPPRG00000023322) ZNHIT6 (ENSPPRG00000023340) COL24A1 (ENSPPRG00000024037) ENSPPRG00000024439 ODF2L (ENSPPRG00000024565) Felidae ANCESTRAL SPECIES 13 ENSGT00940000155441 ENSGT00940000156608 ENSGT00390000017990 ENSGT00940000159546 ENSGT00940000160224 ENSGT00940000156400 ENSGT00390000016680 ENSGT00530000063534.a ENSGT00940000157946 ENSGT00390000012875 ENSGT00940000156909 ENSGT00910000148391 ENSGT00390000001969.b ENSGT00390000007283 ENSGT00390000011648.a ENSGT00950000183121.b.b.b.b.p ##22 ENSGT00940000155057 ENSGT00940000153567.b.a.b ENSGT00940000161422 ENSGT00940000153372.A.f ENSGT00940000159379 ENSGT00940000156019 ENSGT00940000155209 ENSGT00620000087961.b ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000158437 ENSGT00940000158203 ENSGT00940000156681 ENSGT01030000234595.B.c.b ENSGT00940000154983.c.b ENSGT00940000156016 Panthera ANCESTRAL SPECIES 1 ENSGT00940000155441 ENSGT00940000156608 ENSGT00390000017990 ENSGT00940000159546 ENSGT00940000160224 ENSGT00940000156400 ENSGT00390000016680 ENSGT00940000157946 ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000156909 ENSGT00910000148391 ENSGT00390000001969.b ENSGT00390000007283 ENSGT00390000011648.a ENSGT00950000183121.b.b.b.b.p ##22 ENSGT00940000155057 ENSGT00940000153567.b.a.b ENSGT00940000161422 ENSGT00940000153372.A.f ENSGT00940000159379 ENSGT00940000156019 ENSGT00940000155209 ENSGT00620000087961.b ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000158437 ENSGT00940000158203 ENSGT00940000156681 ENSGT01030000234595.B.c.b ENSGT00940000154983.c.b ENSGT00940000156016 Panthera_a ANCESTRAL SPECIES ENSGT00940000155441 ENSGT00940000156608 ENSGT00390000017990 ENSGT00940000159546 ENSGT00940000160224 ENSGT00940000156400 ENSGT00390000016680 ENSGT00530000063534.a ENSGT00940000157946 ENSGT00390000012875 ENSGT00940000156909 ENSGT00910000148391 ENSGT00390000001969.b ENSGT00390000007283 ENSGT00390000011648.a ENSGT00950000183121.b.b.b.b.p ##22 ENSGT00940000155057 ENSGT00940000153567.b.a.b ENSGT00940000161422 ENSGT00940000153372.A.f ENSGT00940000159379 ENSGT00940000156019 ENSGT00940000155209 ENSGT00620000087961.b ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000158437 ENSGT00940000158203 ENSGT00940000156681 ENSGT01030000234595.B.c.b ENSGT00940000154983.c.b ENSGT00940000156016 lion MODERN SPECIES 2 DNAJC2 (ENSPLOG00000010154) PMPCB (ENSPLOG00000010199) NAPEPLD (ENSPLOG00000010231) ARMC10 (ENSPLOG00000010279) FBXL13 (ENSPLOG00000010482) LRRC17 (ENSPLOG00000010998) FAM185A (ENSPLOG00000011080) CCDC146 (ENSPLOG00000011235) FGL2 (ENSPLOG00000011377) GSAP (ENSPLOG00000011417) PTPN12 (ENSPLOG00000011510) ENSPLOG00000011608 ENSPLOG00000011651 TMEM60 (ENSPLOG00000011779) PHTF2 (ENSPLOG00000011836) ENSPLOG00000012035 ##22 MAGI2 (ENSPLOG00000012140) ENSPLOG00000012881 GNAI1 (ENSPLOG00000012923) GNAT3 (ENSPLOG00000013131) CD36 (ENSPLOG00000013234) SEMA3C (ENSPLOG00000013313) ENSPLOG00000013344 HGF (ENSPLOG00000013389) CACNA2D1 (ENSPLOG00000013545) ENSPLOG00000014334 ENSPLOG00000014417 ENSPLOG00000014463 SEMA3E (ENSPLOG00000014628) SEMA3A (ENSPLOG00000015091) SEMA3D (ENSPLOG00000015294) Cat MODERN SPECIES 1 DNAJC2 (ENSFCAG00000000637) PMPCB (ENSFCAG00000000636) NAPEPLD (ENSFCAG00000031529) ARMC10 (ENSFCAG00000033027) FBXL13 (ENSFCAG00000026951) LRRC17 (ENSFCAG00000009938) FAM185A (ENSFCAG00000019213) CCDC146 (ENSFCAG00000007202) FGL2 (ENSFCAG00000035438) GSAP (ENSFCAG00000039240) PTPN12 (ENSFCAG00000005211) ENSFCAG00000036336 RSBN1L (ENSFCAG00000003993) TMEM60 (ENSFCAG00000030949) PHTF2 (ENSFCAG00000023878) ENSFCAG00000053710 ##22 MAGI2 (ENSFCAG00000030754) ENSFCAG00000023790 GNAI1 (ENSFCAG00000007172) GNAT3 (ENSFCAG00000039282) CD36 (ENSFCAG00000024268) SEMA3C (ENSFCAG00000022953) ENSFCAG00000044481 HGF (ENSFCAG00000008554) CACNA2D1 (ENSFCAG00000029914) PCLO (ENSFCAG00000002901) SEMA3E (ENSFCAG00000031520) SEMA3A (ENSFCAG00000028062) SEMA3D (ENSFCAG00000024803) ENSFCAG00000035713 GRM3 (ENSFCAG00000024012) Caniformia ANCESTRAL SPECIES 26 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.r.b ENSGT00940000167584.b ENSGT00870000136506.s ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.a.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b Canidae ANCESTRAL SPECIES 26 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.r.b ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.z ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00550000074801.g.b.a.a ENSGT00940000158684 ENSGT00390000013549.a.b.a.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000154612.m.a.g.a.a.b.b ENSGT00390000010734.j.b.j.b ENSGT00940000163449 ENSGT00940000159951 Canis_lupus ANCESTRAL SPECIES 26 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.r.b ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.y.a.b.a ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.a.a.d ENSGT00390000013549.a.b.a.a.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000154612.m.a.g.a.a.b.b ENSGT00950000185053 ENSGT00390000010734.j.b.j.b ENSGT00940000163449 Dog MODERN SPECIES 144 SH3KBP1 (ENSCAFG00845028384) BCLAF3 (ENSCAFG00845028801) MAP7D2 (ENSCAFG00845028966) EIF1AX (ENSCAFG00845029014) RPS6KA3 (ENSCAFG00845029219) CNKSR2 (ENSCAFG00845029599) KLHL34 (ENSCAFG00845029813) SMPX (ENSCAFG00845029832) MBTPS2 (ENSCAFG00845029854) ENSCAFG00845029922 PHEX (ENSCAFG00845029993) ENSCAFG00845030087 PTCHD1 (ENSCAFG00845030096) PRDX4 (ENSCAFG00845030129) ACOT9 (ENSCAFG00845030245) SAT1 (ENSCAFG00845030292) ##22 APOO (ENSCAFG00845030303) CXorf58 (ENSCAFG00845030319) KLHL15 (ENSCAFG00845030357) EIF2S3 (ENSCAFG00845030382) ZFX (ENSCAFG00845030477) ENSCAFG00845030537 ENSCAFG00845030580 PDK3 (ENSCAFG00845030590) PCYT1B (ENSCAFG00845030613) POLA1 (ENSCAFG00845030721) ARX (ENSCAFG00845030780) ENSCAFG00845030817 ENSCAFG00845030821 MAGEB18 (ENSCAFG00845030833) ENSCAFG00845030856 Dingo MODERN SPECIES 217 ENSCAFG00020004575 MAP7D2 (ENSCAFG00020004579) EIF1AX (ENSCAFG00020004588) RPS6KA3 (ENSCAFG00020004599) ENSCAFG00020004620 CNKSR2 (ENSCAFG00020004670) SMPX (ENSCAFG00020005104) MBTPS2 (ENSCAFG00020005119) ENSCAFG00020005174 PHEX (ENSCAFG00020005217) ENSCAFG00020005279 ENSCAFG00020005312 PTCHD1 (ENSCAFG00020005326) PRDX4 (ENSCAFG00020005348) ACOT9 (ENSCAFG00020005354) SAT1 (ENSCAFG00020005373) ##22 CXorf58 (ENSCAFG00020005375) KLHL15 (ENSCAFG00020005384) EIF2S3B (ENSCAFG00020005385) ENSCAFG00020005401 ENSCAFG00020005446 ENSCAFG00020005503 PDK3 (ENSCAFG00020005598) PCYT1B (ENSCAFG00020005607) POLA1 (ENSCAFG00020005674) ARX (ENSCAFG00020006197) ENSCAFG00020006204 ENSCAFG00020006218 ENSCAFG00020006233 MAGEB18 (ENSCAFG00020006234) ENSCAFG00020006265 Red fox MODERN SPECIES 24 MAP7D2 (ENSVVUG00000013035) EIF1AX (ENSVVUG00000013024) RPS6KA3 (ENSVVUG00000013013) ENSVVUG00000012987 ENSVVUG00000012984 CNKSR2 (ENSVVUG00000012970) ENSVVUG00000012959 SMPX (ENSVVUG00000012956) MBTPS2 (ENSVVUG00000012954) ENSVVUG00000012939 PHEX (ENSVVUG00000012831) ENSVVUG00000012789 PTCHD1 (ENSVVUG00000012785) PRDX4 (ENSVVUG00000012770) ACOT9 (ENSVVUG00000012758) SAT1 (ENSVVUG00000012751) ##22 ENSVVUG00000012745 CXorf58 (ENSVVUG00000012739) KLHL15 (ENSVVUG00000012733) EIF2S3 (ENSVVUG00000012724) ZFX (ENSVVUG00000012708) ENSVVUG00000012701 PDK3 (ENSVVUG00000012680) PCYT1B (ENSVVUG00000012655) POLA1 (ENSVVUG00000012501) ENSVVUG00000012459 ENSVVUG00000012437 MAGEB18 (ENSVVUG00000012430) ENSVVUG00000012424 ENSVVUG00000012419 ENSVVUG00000012400 Caniformia_b ANCESTRAL SPECIES 24 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.r.b ENSGT00940000167584.b ENSGT00870000136506.s ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.a.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000170401 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a Mustelinae ANCESTRAL SPECIES 56 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.s ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.u.a ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.a.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000170401 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.a ENSGT00390000018199.b.b.b American mink MODERN SPECIES 174 EIF1AX (ENSNVIG00000001914) RPS6KA3 (ENSNVIG00000001453) CNKSR2 (ENSNVIG00000000771) SMPX (ENSNVIG00000000732) MBTPS2 (ENSNVIG00000000714) SMS (ENSNVIG00000000673) PHEX (ENSNVIG00000000645) ENSNVIG00000000640 ENSNVIG00000000621 ENSNVIG00000000616 PTCHD1 (ENSNVIG00000000612) ENSNVIG00000000609 PRDX4 (ENSNVIG00000000569) ACOT9 (ENSNVIG00000000496) SAT1 (ENSNVIG00000000462) ##22 ENSNVIG00000000439 CXorf58 (ENSNVIG00000000423) KLHL15 (ENSNVIG00000000417) EIF2S3B (ENSNVIG00000000393) ENSNVIG00000000254 Ferret MODERN SPECIES 306 CNKSR2 (ENSMPUG00000000140) KLHL34 (ENSMPUG00000000136) SMPX (ENSMPUG00000000134) MBTPS2 (ENSMPUG00000000133) SMS (ENSMPUG00000000123) PHEX (ENSMPUG00000000122) ENSMPUG00000000121 ENSMPUG00000019441 PTCHD1 (ENSMPUG00000000120) PRDX4 (ENSMPUG00000000116) ACOT9 (ENSMPUG00000000113) SAT1 (ENSMPUG00000000112) ##22 ENSMPUG00000000109 CXorf58 (ENSMPUG00000000108) KLHL15 (ENSMPUG00000000107) EIF2S3B (ENSMPUG00000000106) ENSMPUG00000000105 PDK3 (ENSMPUG00000000104) ENSMPUG00000000102 PCYT1B (ENSMPUG00000000100) POLA1 (ENSMPUG00000000097) ARX (ENSMPUG00000000092) ENSMPUG00000000089 MAGEB18 (ENSMPUG00000019440) ENSMPUG00000000088 ENSMPUG00000019439 Ursidae ANCESTRAL SPECIES 28 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.r.b ENSGT00940000167584.b ENSGT00870000136506.s ENSGT00940000157313 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.a.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00940000170401 ENSGT00940000163449 ENSGT00940000159951 ENSGT00940000163033.a.b ENSGT00940000163033.a.a Ursus ANCESTRAL SPECIES 101 ENSGT00940000164183 ENSGT00940000157080 ENSGT00950000185291 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801.g.b.b ENSGT00940000158684 ENSGT00390000013549.a.b.a.a ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000163449 ENSGT00940000159951.o.a ENSGT00940000163033.a.b ENSGT00940000163033.a.a ENSGT00940000154319.v ENSGT00390000018199.b.b.b American black bear MODERN SPECIES 2432 SAT1 (ENSUAMG00000021209) ##22 APOO (ENSUAMG00000021211) CXorf58 (ENSUAMG00000021213) KLHL15 (ENSUAMG00000021216) EIF2S3B (ENSUAMG00000021218) Polar bear MODERN SPECIES 199 RPS6KA3 (ENSUMAG00000010772) CNKSR2 (ENSUMAG00000010845) SMPX (ENSUMAG00000011168) MBTPS2 (ENSUMAG00000011194) ENSUMAG00000011222 SMS (ENSUMAG00000011225) PHEX (ENSUMAG00000011248) ENSUMAG00000011412 ENSUMAG00000011422 ENSUMAG00000011448 PTCHD1 (ENSUMAG00000011456) ENSUMAG00000011461 PRDX4 (ENSUMAG00000011507) ACOT9 (ENSUMAG00000011514) ENSUMAG00000011523 SAT1 (ENSUMAG00000011528) ##22 APOO (ENSUMAG00000011537) CXorf58 (ENSUMAG00000011546) KLHL15 (ENSUMAG00000011554) ENSUMAG00000011557 ENSUMAG00000011587 ENSUMAG00000011634 PDK3 (ENSUMAG00000011646) PCYT1B (ENSUMAG00000011657) POLA1 (ENSUMAG00000011852) ENSUMAG00000012922 ENSUMAG00000012931 ENSUMAG00000012932 ENSUMAG00000012936 ENSUMAG00000012946 PPP4R3C (ENSUMAG00000012950) Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1294 ENSAMEG00000012768 ##22 Giant Panda MODERN SPECIES 2288 ENSAMEG00000028944 RPS6KA3 (ENSAMEG00000016514) CNKSR2 (ENSAMEG00000016482) KLHL34 (ENSAMEG00000016476) SMPX (ENSAMEG00000016467) ENSAMEG00000016444 SMS (ENSAMEG00000016423) PHEX (ENSAMEG00000016398) ENSAMEG00000011652 ENSAMEG00000019953 PTCHD1 (ENSAMEG00000014696) ENSAMEG00000026223 PRDX4 (ENSAMEG00000012797) ACOT9 (ENSAMEG00000012778) ENSAMEG00000012749 ENSAMEG00000024779 ##22 ENSAMEG00000012745 KLHL15 (ENSAMEG00000012739) ENSAMEG00000012700 ENSAMEG00000012681 PDK3 (ENSAMEG00000014869) PCYT1B (ENSAMEG00000014854) POLA1 (ENSAMEG00000014758) ARX (ENSAMEG00000025407) ENSAMEG00000031027 MAGEB18 (ENSAMEG00000020168) ENSAMEG00000028706 ENSAMEG00000011478 ENSAMEG00000020167 PPP4R3C (ENSAMEG00000019938) ENSAMEG00000019937 Marsupialia ANCESTRAL SPECIES 23 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00950000182841.a.db ENSGT00940000159499 ENSGT00940000154342.C.i ENSGT00940000154342.C.j Opossum MODERN SPECIES 3 ENSMODG00000008113 ENSMODG00000027820 RPS6KA3 (ENSMODG00000008086) ENSMODG00000051481 ENSMODG00000043235 CNKSR2 (ENSMODG00000008001) ENSMODG00000007934 MBTPS2 (ENSMODG00000007926) ENSMODG00000007897 PHEX (ENSMODG00000007861) ENSMODG00000050590 ENSMODG00000037695 PTCHD1 (ENSMODG00000007811) PRDX4 (ENSMODG00000007799) ACOT9 (ENSMODG00000007768) SAT1 (ENSMODG00000007747) ##22 APOO (ENSMODG00000025554) ENSMODG00000025553 KLHL15 (ENSMODG00000025253) ENSMODG00000007541 ENSMODG00000007512 PDK3 (ENSMODG00000007427) PCYT1B (ENSMODG00000007379) POLA1 (ENSMODG00000007354) ARX (ENSMODG00000007311) ENSMODG00000049975 ENSMODG00000007217 ENSMODG00000025260 ENSMODG00000049841 IL1RAPL1 (ENSMODG00000007199) ENSMODG00000007072 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a.f ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.cb ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00950000183102.C.e ENSGT00390000011425.B ENSGT01000000214434.B.b.c ENSGT00950000182841.a.db Tasmanian devil MODERN SPECIES 2 MAP3K15 (ENSSHAG00000014925) SH3KBP1 (ENSSHAG00000013892) BCLAF3 (ENSSHAG00000012448) EIF1AX (ENSSHAG00000010995) RPS6KA3 (ENSSHAG00000010273) ENSSHAG00000024113 CNKSR2 (ENSSHAG00000013024) KLHL34 (ENSSHAG00000025108) SMPX (ENSSHAG00000023724) MBTPS2 (ENSSHAG00000012034) SMS (ENSSHAG00000011004) PHEX (ENSSHAG00000008915) PTCHD1 (ENSSHAG00000012338) PRDX4 (ENSSHAG00000029195) ACOT9 (ENSSHAG00000010202) SAT1 (ENSSHAG00000009704) ##22 APOO (ENSSHAG00000008734) ENSSHAG00000008334 KLHL15 (ENSSHAG00000007725) ENSSHAG00000007159 ENSSHAG00000004983 PDK3 (ENSSHAG00000015104) PCYT1B (ENSSHAG00000030099) POLA1 (ENSSHAG00000013218) ENSSHAG00000020510 ENSSHAG00000023767 ENSSHAG00000020557 ENSSHAG00000029844 TASL (ENSSHAG00000021619) ENSSHAG00000006470 ENSSHAG00000017813 Diprotodontia ANCESTRAL SPECIES 23 ENSGT00530000063174.a.g ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a.f ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.cb ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00950000183102.C.e ENSGT00390000011425.B ENSGT01000000214434.B.b.c Diprotodontia_a ANCESTRAL SPECIES 24 ENSGT00530000063174.a.g ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a.f ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b.cb ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00950000183102.C.e ENSGT00390000011425.B ENSGT01000000214434.B.b.c Common wonbat MODERN SPECIES 1142 SAT1 (ENSVURG00010010927) ##22 APOO (ENSVURG00010010940) ENSVURG00010010951 KLHL15 (ENSVURG00010010959) ENSVURG00010010970 ENSVURG00010010984 ENSVURG00010010997 PDK3 (ENSVURG00010011005) PCYT1B (ENSVURG00010011032) POLA1 (ENSVURG00010011074) ARX (ENSVURG00010011250) ENSVURG00010011259 ENSVURG00010011265 ENSVURG00010011267 ENSVURG00010011271 koala MODERN SPECIES 36 MAP3K15 (ENSPCIG00000009152) SH3KBP1 (ENSPCIG00000029212) BCLAF3 (ENSPCIG00000007517) MAP7D2 (ENSPCIG00000007534) EIF1AX (ENSPCIG00000007615) RPS6KA3 (ENSPCIG00000007618) CNKSR2 (ENSPCIG00000011723) ENSPCIG00000011721 MBTPS2 (ENSPCIG00000011718) SMS (ENSPCIG00000033142) PHEX (ENSPCIG00000011706) ENSPCIG00000011702 PTCHD1 (ENSPCIG00000008175) ENSPCIG00000008170 ACOT9 (ENSPCIG00000008098) SAT1 (ENSPCIG00000024007) ##22 ENSPCIG00000024012 ENSPCIG00000024014 KLHL15 (ENSPCIG00000024016) ENSPCIG00000024017 ENSPCIG00000024018 PDK3 (ENSPCIG00000028653) PCYT1B (ENSPCIG00000036162) POLA1 (ENSPCIG00000028663) ARX (ENSPCIG00000001443) ENSPCIG00000035949 ENSPCIG00000009890 ENSPCIG00000020932 IL1RAPL1 (ENSPCIG00000020933) ENSPCIG00000036290 ENSPCIG00000020937 Wallaby MODERN SPECIES 3552 ENSMEUG00000015176 ##22 Platypus MODERN SPECIES 6 ENSOANG00000004029 MAP3K15 (ENSOANG00000004027) SH3KBP1 (ENSOANG00000039084) BCLAF3 (ENSOANG00000004022) MAP7D2 (ENSOANG00000004016) EIF1AX (ENSOANG00000048193) RPS6KA3 (ENSOANG00000010658) CNKSR2 (ENSOANG00000010656) SMPX (ENSOANG00000038957) MBTPS2 (ENSOANG00000044594) SMS (ENSOANG00000010654) PHEX (ENSOANG00000010653) PTCHD1 (ENSOANG00000010652) ENSOANG00000012275 ACOT9 (ENSOANG00000012276) SAT1 (ENSOANG00000011507) ##22 APOO (ENSOANG00000014705) ENSOANG00000028526 KLHL15 (ENSOANG00000009137) ENSOANG00000011504 ZFX (ENSOANG00000046710) ENSOANG00000046289 PDK3 (ENSOANG00000050020) ENSOANG00000048978 POLA1 (ENSOANG00000049395) ARX (ENSOANG00000049228) IL1RAPL1 (ENSOANG00000006764) ENSOANG00000037805 ENSOANG00000051010 ENSOANG00000010903 TAB3 (ENSOANG00000037141) Sauria ANCESTRAL SPECIES 2 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT01090000260434 Lepidosauria ANCESTRAL SPECIES 4 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b Episquamata ANCESTRAL SPECIES 2 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370.j ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b Laterata ANCESTRAL SPECIES ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370.j ENSGT00940000159370.i.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT01090000260434 Common wall lizard MODERN SPECIES 12 SH3KBP1 (ENSPMRG00000007049) ENSPMRG00000006968 MAP7D2 (ENSPMRG00000006925) ENSPMRG00000006905 RPS6KA3 (ENSPMRG00000005784) ENSPMRG00000005565 CNKSR2 (ENSPMRG00000004735) KLHL34 (ENSPMRG00000004569) SMPX (ENSPMRG00000004564) MBTPS2 (ENSPMRG00000004556) SMS (ENSPMRG00000004545) PHEX (ENSPMRG00000004498) PTCHD1 (ENSPMRG00000004487) PRDX4 (ENSPMRG00000004476) ACOT9 (ENSPMRG00000004440) SAT1 (ENSPMRG00000004420) ##22 ENSPMRG00000004411 KLHL15 (ENSPMRG00000004390) ENSPMRG00000004350 ENSPMRG00000004337 ENSPMRG00000004329 PDK3 (ENSPMRG00000004317) PCYT1B (ENSPMRG00000004307) POLA1 (ENSPMRG00000004234) ARX (ENSPMRG00000004216) ENSPMRG00000004209 ENSPMRG00000004202 IL1RAPL1 (ENSPMRG00000004193) NR0B1 (ENSPMRG00000004180) TASL (ENSPMRG00000004173) ENSPMRG00000004136 Argentine black and white tegu MODERN SPECIES MAP3K15 (ENSSMRG00000022620) SH3KBP1 (ENSSMRG00000022685) BCLAF3 (ENSSMRG00000022709) MAP7D2 (ENSSMRG00000022712) EIF1AX (ENSSMRG00000022713) ENSSMRG00000022727 CNKSR2 (ENSSMRG00000022817) ENSSMRG00000022818 SMPX (ENSSMRG00000022819) MBTPS2 (ENSSMRG00000022820) SMS (ENSSMRG00000022821) PHEX (ENSSMRG00000022822) PTCHD1 (ENSSMRG00000022824) PRDX4 (ENSSMRG00000022825) ACOT9 (ENSSMRG00000022826) SAT1 (ENSSMRG00000022827) ##22 APOO (ENSSMRG00000022828) ENSSMRG00000022829 KLHL15 (ENSSMRG00000022830) ENSSMRG00000022832 ENSSMRG00000022833 ENSSMRG00000022834 PDK3 (ENSSMRG00000022835) PCYT1B (ENSSMRG00000022837) POLA1 (ENSSMRG00000022838) ARX (ENSSMRG00000022840) ENSSMRG00000022842 ENSSMRG00000022845 NR0B1 (ENSSMRG00000022846) TASL (ENSSMRG00000022847) ENSSMRG00000022848 Toxicofera ANCESTRAL SPECIES 2 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370.j ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 Elapidae ANCESTRAL SPECIES 13 ENSGT00940000159562 ENSGT00940000155886.a ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370.j.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a.m.a.b Elapidae_a ANCESTRAL SPECIES 16 ENSGT00940000159562 ENSGT00940000155886.a ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370.j.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 Acanthophiinae ANCESTRAL SPECIES 21 ENSGT00940000159562 ENSGT00940000155886.a ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370.j.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00510000048637 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 Eastern brown snake MODERN SPECIES 68 BCLAF3 (ENSPTXG00000006385) MAP7D2 (ENSPTXG00000006388) ENSPTXG00000006389 RPS6KA3 (ENSPTXG00000006391) CNKSR2 (ENSPTXG00000006394) KLHL34 (ENSPTXG00000007069) SMPX (ENSPTXG00000007070) MBTPS2 (ENSPTXG00000007071) SMS (ENSPTXG00000007072) PHEX (ENSPTXG00000007074) ENSPTXG00000007076 ENSPTXG00000007077 ENSPTXG00000007078 PRDX4 (ENSPTXG00000007079) ACOT9 (ENSPTXG00000007080) SAT1 (ENSPTXG00000007081) ##22 APOO (ENSPTXG00000007082) Mainland tiger snake MODERN SPECIES 67 BCLAF3 (ENSNSUG00000012389) ENSNSUG00000012387 ENSNSUG00000012386 ENSNSUG00000012384 RPS6KA3 (ENSNSUG00000012329) CNKSR2 (ENSNSUG00000011963) KLHL34 (ENSNSUG00000011953) SMPX (ENSNSUG00000011952) MBTPS2 (ENSNSUG00000011951) SMS (ENSNSUG00000011950) PHEX (ENSNSUG00000011949) ENSNSUG00000011948 ENSNSUG00000011947 PRDX4 (ENSNSUG00000011946) ACOT9 (ENSNSUG00000011945) SAT1 (ENSNSUG00000011944) ##22 APOO (ENSNSUG00000011943) ENSNSUG00000011942 KLHL15 (ENSNSUG00000011941) ENSNSUG00000011940 ENSNSUG00000011939 PDK3 (ENSNSUG00000011435) PCYT1B (ENSNSUG00000011061) POLA1 (ENSNSUG00000011039) ARX (ENSNSUG00000011038) ENSNSUG00000011037 ENSNSUG00000011036 ENSNSUG00000011035 Blue-lipped sea krait MODERN SPECIES 2902 SAT1 (ENSLLTG00000000900) ##22 Indian cobra MODERN SPECIES 5 ENSNNAG00000013538 SH3KBP1 (ENSNNAG00000013422) BCLAF3 (ENSNNAG00000013397) MAP7D2 (ENSNNAG00000013341) ENSNNAG00000013320 RPS6KA3 (ENSNNAG00000012085) CNKSR2 (ENSNNAG00000010893) ENSNNAG00000010819 SMPX (ENSNNAG00000010781) MBTPS2 (ENSNNAG00000010623) SMS (ENSNNAG00000010591) PHEX (ENSNNAG00000010440) ENSNNAG00000010387 PRDX4 (ENSNNAG00000010298) ACOT9 (ENSNNAG00000010278) SAT1 (ENSNNAG00000010234) ##22 APOO (ENSNNAG00000010195) ENSNNAG00000010149 KLHL15 (ENSNNAG00000010132) ENSNNAG00000010085 ENSNNAG00000010062 PDK3 (ENSNNAG00000009991) PCYT1B (ENSNNAG00000009938) POLA1 (ENSNNAG00000009788) ARX (ENSNNAG00000009752) ENSNNAG00000009738 ENSNNAG00000009666 ENSNNAG00000009638 ENSNNAG00000009582 ENSNNAG00000009564 NR0B1 (ENSNNAG00000009547) Lizard MODERN SPECIES 2 BCLAF3 (ENSACAG00000012584) MAP7D2 (ENSACAG00000012609) ENSACAG00000012660 ENSACAG00000012681 ENSACAG00000035874 CNKSR2 (ENSACAG00000025299) KLHL34 (ENSACAG00000016729) SMPX (ENSACAG00000016732) MBTPS2 (ENSACAG00000016735) ENSACAG00000040170 ENSACAG00000016737 PHEX (ENSACAG00000007524) PTCHD1 (ENSACAG00000007519) ENSACAG00000007489 ACOT9 (ENSACAG00000007472) SAT1 (ENSACAG00000007429) ##22 ENSACAG00000035700 KLHL15 (ENSACAG00000007405) ENSACAG00000007416 ENSACAG00000043970 ENSACAG00000043901 ENSACAG00000007288 ENSACAG00000042471 ENSACAG00000007227 ENSACAG00000036930 PDK3 (ENSACAG00000007063) PCYT1B (ENSACAG00000007032) POLA1 (ENSACAG00000008221) ENSACAG00000040996 ENSACAG00000035746 ENSACAG00000035987 tuatara MODERN SPECIES 196 BCLAF3 (ENSSPUG00000018428) MAP7D2 (ENSSPUG00000018461) EIF1AY (ENSSPUG00000018499) RPS6KA3 (ENSSPUG00000018513) CNKSR2 (ENSSPUG00000018596) ENSSPUG00000018663 SMPX (ENSSPUG00000018668) MBTPS2 (ENSSPUG00000018676) SMS (ENSSPUG00000018687) PHEX (ENSSPUG00000018709) ENSSPUG00000018743 ENSSPUG00000018750 ENSSPUG00000018753 PRDX4 (ENSSPUG00000018756) ACOT9 (ENSSPUG00000000008) SAT1 (ENSSPUG00000000012) ##22 APOO (ENSSPUG00000000078) ENSSPUG00000000086 ENSSPUG00000000102 KLHL15 (ENSSPUG00000000106) ENSSPUG00000000114 ENSSPUG00000000152 ENSSPUG00000000166 ENSSPUG00000000190 PDK3 (ENSSPUG00000000230) PCYT1B (ENSSPUG00000000241) ENSSPUG00000000270 POLA1 (ENSSPUG00000000303) ARX (ENSSPUG00000000346) Archelosauria ANCESTRAL SPECIES ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT01090000260434 Archosauria ANCESTRAL SPECIES 2 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 Aves ANCESTRAL SPECIES ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 Neognathae ANCESTRAL SPECIES 1 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a Neognathae_b ANCESTRAL SPECIES ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a Neognathae_c ANCESTRAL SPECIES 4 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a Golden eagle MODERN SPECIES 23 BCLAF3 (ENSACCG00020003922) MAP7D2 (ENSACCG00020003899) EIF1AY (ENSACCG00020003868) ENSACCG00020003833 CNKSR2 (ENSACCG00020003793) KLHL34 (ENSACCG00020003780) SMPX (ENSACCG00020003772) MBTPS2 (ENSACCG00020003760) SMS (ENSACCG00020003730) PHEX (ENSACCG00020003703) ENSACCG00020003681 ENSACCG00020003664 ENSACCG00020003657 PRDX4 (ENSACCG00020003641) ACOT9 (ENSACCG00020003604) SAT1 (ENSACCG00020003577) ##22 APOO (ENSACCG00020003555) KLHL15 (ENSACCG00020003536) ENSACCG00020003515 ENSACCG00020003501 ENSACCG00020003488 ENSACCG00020003471 PDK3 (ENSACCG00020003448) PCYT1B (ENSACCG00020003408) POLA1 (ENSACCG00020003171) ARX (ENSACCG00020002929) IL1RAPL1 (ENSACCG00020002904) ENSACCG00020002871 NR0B1 (ENSACCG00020002863) TASL (ENSACCG00020002849) ENSACCG00020002793 Kakapo MODERN SPECIES 11 ENSSHBG00005018962 SH3KBP1 (ENSSHBG00005018133) BCLAF3 (ENSSHBG00005018091) MAP7D2 (ENSSHBG00005018085) EIF1AY (ENSSHBG00005018079) RPS6KA3 (ENSSHBG00005007492) CNKSR2 (ENSSHBG00005006684) KLHL34 (ENSSHBG00005006628) SMPX (ENSSHBG00005006614) MBTPS2 (ENSSHBG00005006593) SMS (ENSSHBG00005006564) PHEX (ENSSHBG00005006528) PTCHD1 (ENSSHBG00005006504) PRDX4 (ENSSHBG00005006485) ACOT9 (ENSSHBG00005006343) SAT1 (ENSSHBG00005006283) ##22 APOO (ENSSHBG00005006240) ENSSHBG00005000010 KLHL15 (ENSSHBG00005018195) ENSSHBG00005018191 ENSSHBG00005018185 ENSSHBG00005018181 PDK3 (ENSSHBG00005018174) PCYT1B (ENSSHBG00005018170) POLA1 (ENSSHBG00005018164) ARX (ENSSHBG00005018160) ENSSHBG00005018158 IL1RAPL1 (ENSSHBG00005018134) NR0B1 (ENSSHBG00005018128) TASL (ENSSHBG00005018126) ENSSHBG00005012925 Passeriformes ANCESTRAL SPECIES 1 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000014109.d.b.b ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 Passeroidea ANCESTRAL SPECIES 10 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000014109.d.b.b ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 Common canary MODERN SPECIES 11 MAP3K15 (ENSSCAG00000013989) SH3KBP1 (ENSSCAG00000014257) BCLAF3 (ENSSCAG00000014318) MAP7D2 (ENSSCAG00000014326) ENSSCAG00000014338 RPS6KA3 (ENSSCAG00000014654) CNKSR2 (ENSSCAG00000015514) KLHL34 (ENSSCAG00000015632) SMPX (ENSSCAG00000015635) MBTPS2 (ENSSCAG00000015638) SMS (ENSSCAG00000015640) PHEX (ENSSCAG00000015644) PTCHD1 (ENSSCAG00000015647) PRDX4 (ENSSCAG00000015650) ACOT9 (ENSSCAG00000015654) SAT1 (ENSSCAG00000015656) ##22 APOO (ENSSCAG00000015659) KLHL15 (ENSSCAG00000015664) ENSSCAG00000015684 ENSSCAG00000015750 ENSSCAG00000015754 PDK3 (ENSSCAG00000015783) PCYT1B (ENSSCAG00000015843) POLA1 (ENSSCAG00000015849) ARX (ENSSCAG00000015863) Zebra finch MODERN SPECIES SH3KBP1 (ENSTGUG00000007550) BCLAF3 (ENSTGUG00000007538) MAP7D2 (ENSTGUG00000007527) ENSTGUG00000007524 RPS6KA3 (ENSTGUG00000007471) CNKSR2 (ENSTGUG00000007450) KLHL34 (ENSTGUG00000007449) SMPX (ENSTGUG00000020200) MBTPS2 (ENSTGUG00000007431) SMS (ENSTGUG00000007411) PHEX (ENSTGUG00000007352) ENSTGUG00000029682 PTCHD1 (ENSTGUG00000021804) PRDX4 (ENSTGUG00000007332) ACOT9 (ENSTGUG00000007308) SAT1 (ENSTGUG00000007289) ##22 APOO (ENSTGUG00000007280) KLHL15 (ENSTGUG00000021352) ENSTGUG00000007233 ENSTGUG00000007219 ENSTGUG00000007212 PDK3 (ENSTGUG00000007181) PCYT1B (ENSTGUG00000007158) POLA1 (ENSTGUG00000007103) ARX (ENSTGUG00000007097) IL1RAPL1 (ENSTGUG00000007085) NR0B1 (ENSTGUG00000007081) ENSTGUG00000007076 TASL (ENSTGUG00000007075) ENSTGUG00000007017 TAB3 (ENSTGUG00000007013) Medium ground finch DUPLICATION Medium ground finch MODERN SPECIES 78 CNKSR2 (ENSGFOG00000013053) KLHL34 (ENSGFOG00000013082) SMPX (ENSGFOG00000013085) MBTPS2 (ENSGFOG00000013093) SMS (ENSGFOG00000013100) PHEX (ENSGFOG00000013108) ENSGFOG00000013130 ENSGFOG00000013131 PRDX4 (ENSGFOG00000013133) ACOT9 (ENSGFOG00000013134) ENSGFOG00000013144 ##22 APOO (ENSGFOG00000013149) KLHL15 (ENSGFOG00000013156) ENSGFOG00000013162 ENSGFOG00000013165 ENSGFOG00000013174 PDK3 (ENSGFOG00000013185) PCYT1B (ENSGFOG00000013358) POLA1 (ENSGFOG00000013362) Medium ground finch MODERN SPECIES 730 ENSGFOG00000002826 ##22 Flycatcher MODERN SPECIES SH3KBP1 (ENSFALG00000004232) BCLAF3 (ENSFALG00000004216) ENSFALG00000025070 ENSFALG00000026313 ENSFALG00000026702 EIF1AX (ENSFALG00000023239) RPS6KA3 (ENSFALG00000004203) CNKSR2 (ENSFALG00000004197) KLHL34 (ENSFALG00000004192) SMPX (ENSFALG00000004189) SMS (ENSFALG00000004178) PHEX (ENSFALG00000004174) PTCHD1 (ENSFALG00000004172) PRDX4 (ENSFALG00000026461) ACOT9 (ENSFALG00000004154) SAT1 (ENSFALG00000024467) ##22 APOO (ENSFALG00000028224) KLHL15 (ENSFALG00000023668) ENSFALG00000004131 ZFX (ENSFALG00000026147) ENSFALG00000004120 PDK3 (ENSFALG00000004115) PCYT1B (ENSFALG00000028233) POLA1 (ENSFALG00000004080) ARX (ENSFALG00000004065) ENSFALG00000022908 IL1RAPL1 (ENSFALG00000002374) NR0B1 (ENSFALG00000002381) TASL (ENSFALG00000014724) ENSFALG00000002387 TAB3 (ENSFALG00000002394) Great tit MODERN SPECIES BCLAF3 (ENSPMJG00000011294) MAP7D2 (ENSPMJG00000011293) EIF1AX (ENSPMJG00000011291) RPS6KA3 (ENSPMJG00000011290) CNKSR2 (ENSPMJG00000011285) ENSPMJG00000011284 SMPX (ENSPMJG00000011283) MBTPS2 (ENSPMJG00000011282) SMS (ENSPMJG00000011240) PHEX (ENSPMJG00000011239) ENSPMJG00000011235 ENSPMJG00000011234 ENSPMJG00000011233 PRDX4 (ENSPMJG00000011231) ACOT9 (ENSPMJG00000011230) SAT1 (ENSPMJG00000011225) ##22 APOO (ENSPMJG00000011223) KLHL15 (ENSPMJG00000011222) ENSPMJG00000011221 ENSPMJG00000011220 ENSPMJG00000011219 PDK3 (ENSPMJG00000011217) PCYT1B (ENSPMJG00000011216) POLA1 (ENSPMJG00000011212) ARX (ENSPMJG00000011210) ENSPMJG00000011200 IL1RAPL1 (ENSPMJG00000011191) NR0B1 (ENSPMJG00000011185) TASL (ENSPMJG00000011181) ENSPMJG00000011175 TAB3 (ENSPMJG00000011173) Galloanserae ANCESTRAL SPECIES 1 ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a ENSGT00530000063484.b.b Anatidae ANCESTRAL SPECIES 6 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040.b ENSGT00550000074891 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a ENSGT00530000063484.b.b Pink-footed goose MODERN SPECIES 12 RPS6KA3 (ENSABRG00000007945) CNKSR2 (ENSABRG00000007980) KLHL34 (ENSABRG00000008051) SMPX (ENSABRG00000008102) MBTPS2 (ENSABRG00000008126) SMS (ENSABRG00000008156) PHEX (ENSABRG00000008167) PTCHD1 (ENSABRG00000008200) PRDX4 (ENSABRG00000008205) ACOT9 (ENSABRG00000008223) ENSABRG00000008244 SAT1 (ENSABRG00000008251) ##22 APOO (ENSABRG00000008276) KLHL15 (ENSABRG00000008293) ENSABRG00000008306 ENSABRG00000008335 ENSABRG00000008348 PDK3 (ENSABRG00000008357) ENSABRG00000008380 PCYT1B (ENSABRG00000008385) POLA1 (ENSABRG00000008402) ARX (ENSABRG00000008483) ENSABRG00000008497 IL1RAPL1 (ENSABRG00000008556) ENSABRG00000008772 NR0B1 (ENSABRG00000008777) TASL (ENSABRG00000008795) Duck MODERN SPECIES ENSAPLG00000021659 ENSAPLG00000017728 ENSAPLG00000011749 ENSAPLG00000029454 ENSAPLG00000019326 RPS6KA3 (ENSAPLG00000014093) CNKSR2 (ENSAPLG00000013780) KLHL34 (ENSAPLG00000011718) SMPX (ENSAPLG00000018333) MBTPS2 (ENSAPLG00000013395) SMS (ENSAPLG00000013124) PHEX (ENSAPLG00000012570) PTCHD1 (ENSAPLG00000012537) PRDX4 (ENSAPLG00000013037) ACOT9 (ENSAPLG00000012395) SAT1 (ENSAPLG00000012260) ##22 APOO (ENSAPLG00000012043) KLHL15 (ENSAPLG00000012028) ENSAPLG00000011402 ENSAPLG00000024229 ENSAPLG00000011089 ENSAPLG00000010976 PDK3 (ENSAPLG00000010492) ENSAPLG00000010281 POLA1 (ENSAPLG00000008944) ENSAPLG00000025069 ENSAPLG00000022772 ENSAPLG00000022122 ENSAPLG00000019671 IL1RAPL1 (ENSAPLG00000003925) NR0B1 (ENSAPLG00000019472) Phasianidae ANCESTRAL SPECIES ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a ENSGT00530000063484.b.b Phasianidae_b ANCESTRAL SPECIES ENSGT00940000159562 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a ENSGT00530000063484.b.b Turkey MODERN SPECIES RAB9A (ENSMGAG00000021334) ENSMGAG00000014702 ENSMGAG00000020394 OFD1 (ENSMGAG00000014701) GPM6B (ENSMGAG00000014700) ENSMGAG00000022038 ENSMGAG00000019672 ENSMGAG00000014645 ENSMGAG00000014646 ENSMGAG00000022511 ENSMGAG00000020279 ENSMGAG00000022979 ENSMGAG00000018500 ENSMGAG00000014649 KLHL15 (ENSMGAG00000014650) SAT1 (ENSMGAG00000014652) ##22 APOO (ENSMGAG00000014651) ENSMGAG00000014654 ENSMGAG00000014653 ENSMGAG00000014655 ENSMGAG00000022195 ENSMGAG00000018512 ENSMGAG00000020081 ENSMGAG00000014656 ENSMGAG00000014657 ENSMGAG00000014659 ENSMGAG00000014661 ENSMGAG00000014662 ENSMGAG00000020891 ENSMGAG00000020398 ENSMGAG00000014663 Chicken MODERN SPECIES ENSGALG00010002869 SH3KBP1 (ENSGALG00010002809) CXorf23 (ENSGALG00010002790) MAP7D2 (ENSGALG00010002765) EIF1AX (ENSGALG00010002653) RPS6KA3 (ENSGALG00010002592) CNKSR2 (ENSGALG00010001918) KLHL34 (ENSGALG00010001890) SMPX (ENSGALG00010001885) MBTPS2 (ENSGALG00010003275) SMS (ENSGALG00010003268) PHEX (ENSGALG00010003252) ENSGALG00010003247 PRDX4 (ENSGALG00010003214) ACOT9 (ENSGALG00010003193) SAT1 (ENSGALG00010003133) ##22 APOO (ENSGALG00010003125) KLHL15 (ENSGALG00010003101) EIF2S3 (ENSGALG00010003077) ZFX (ENSGALG00010003052) SLC51AL (ENSGALG00010002149) PDK3 (ENSGALG00010002137) PCYT1B (ENSGALG00010002097) POLA1 (ENSGALG00010002087) ARX (ENSGALG00010002079) ENSGALG00010002283 ENSGALG00010002279 IL1RAPL1 (ENSGALG00010002275) NR0B1 (ENSGALG00010002261) CXorf21 (ENSGALG00010002259) GK2 (ENSGALG00010002253) Japanese quail MODERN SPECIES IL1RAPL1 (ENSCJPG00005017161) ENSCJPG00005017165 EIF1AX (ENSCJPG00005017168) RPS6KA3 (ENSCJPG00005017170) ENSCJPG00005017187 ENSCJPG00005017188 ENSCJPG00005017190 KLHL34 (ENSCJPG00005017191) SMPX (ENSCJPG00005017193) MBTPS2 (ENSCJPG00005017198) SMS (ENSCJPG00005017200) PHEX (ENSCJPG00005017203) PTCHD1 (ENSCJPG00005017258) PRDX4 (ENSCJPG00005017260) ACOT9 (ENSCJPG00005017261) SAT1 (ENSCJPG00005017262) ##22 APOO (ENSCJPG00005017263) KLHL15 (ENSCJPG00005017264) ENSCJPG00005017265 ENSCJPG00005017267 ENSCJPG00005017268 PDK3 (ENSCJPG00005017269) PCYT1B (ENSCJPG00005017302) POLA1 (ENSCJPG00005017303) ARX (ENSCJPG00005017313) BCLAF3 (ENSCJPG00005017348) SH3KBP1 (ENSCJPG00005017358) MAP3K15 (ENSCJPG00005017843) ENSCJPG00005017845 ADGRG2 (ENSCJPG00005017848) PHKA2 (ENSCJPG00005017878) African ostrich MODERN SPECIES 283 ENSSCUG00000001059 SMPX (ENSSCUG00000001065) MBTPS2 (ENSSCUG00000001070) SMS (ENSSCUG00000001073) PHEX (ENSSCUG00000001081) PRDX4 (ENSSCUG00000001087) ACOT9 (ENSSCUG00000001089) SAT1 (ENSSCUG00000001090) ##22 APOO (ENSSCUG00000001093) ENSSCUG00000001095 KLHL15 (ENSSCUG00000001099) ENSSCUG00000001109 ENSSCUG00000001119 PDK3 (ENSSCUG00000001120) PCYT1B (ENSSCUG00000001121) POLA1 (ENSSCUG00000001122) IL1RAPL1 (ENSSCUG00000001130) Australian saltwater crocodile MODERN SPECIES 27 SH3KBP1 (ENSCPRG00005004278) BCLAF3 (ENSCPRG00005004205) MAP7D2 (ENSCPRG00005004181) EIF1AY (ENSCPRG00005004137) RPS6KA3 (ENSCPRG00005004126) CNKSR2 (ENSCPRG00005004095) KLHL34 (ENSCPRG00005004072) SMPX (ENSCPRG00005004068) MBTPS2 (ENSCPRG00005004052) SMS (ENSCPRG00005004044) PHEX (ENSCPRG00005003998) ENSCPRG00005003970 ENSCPRG00005003968 PRDX4 (ENSCPRG00005003960) ACOT9 (ENSCPRG00005003932) SAT1 (ENSCPRG00005003925) ##22 APOO (ENSCPRG00005003918) ENSCPRG00005003910 KLHL15 (ENSCPRG00005003907) ENSCPRG00005003867 ENSCPRG00005003859 ENSCPRG00005003852 PDK3 (ENSCPRG00005003848) PCYT1B (ENSCPRG00005003820) POLA1 (ENSCPRG00005003771) ENSCPRG00005003705 ENSCPRG00005003681 ENSCPRG00005003663 ENSCPRG00005003648 TASL (ENSCPRG00005003640) ENSCPRG00005003617 Cryptodira ANCESTRAL SPECIES ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT01090000260434 Testudinoidea ANCESTRAL SPECIES 1 ENSGT00940000155886 ENSGT00950000183163.b.a ENSGT00950000182941.b.b ENSGT00390000008256.a ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT01090000260434 Emydidae ANCESTRAL SPECIES 28 ENSGT00940000155886 ENSGT00950000183163.b.a ENSGT00950000182941.b.b ENSGT00390000008256.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT01090000260434 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 6 ENSTMTG00000012334 ENSTMTG00000012414 ENSTMTG00000012505 ENSTMTG00000013119 ENSTMTG00000020397 ENSTMTG00000020818 ENSTMTG00000020839 ENSTMTG00000020853 ENSTMTG00000020859 ENSTMTG00000020869 ENSTMTG00000020902 ENSTMTG00000020909 ENSTMTG00000020913 ENSTMTG00000020939 ENSTMTG00000021066 ENSTMTG00000021061 ##22 ENSTMTG00000021078 ENSTMTG00000021105 ENSTMTG00000021112 ENSTMTG00000021115 ENSTMTG00000021123 ENSTMTG00000021132 ENSTMTG00000021139 ENSTMTG00000021157 ENSTMTG00000021176 ENSTMTG00000021181 ENSTMTG00000021188 ENSTMTG00000021198 ENSTMTG00000021201 ENSTMTG00000021212 ENSTMTG00000021237 Three-toed box turtle MODERN SPECIES 5 ENSTMTG00000004847 ENSTMTG00000005010 ENSTMTG00000005717 ENSTMTG00000016148 ENSTMTG00000017830 ENSTMTG00000017855 ENSTMTG00000017886 ENSTMTG00000018067 ENSTMTG00000018074 ENSTMTG00000018114 ENSTMTG00000018119 ENSTMTG00000018125 ENSTMTG00000018148 ENSTMTG00000018175 ENSTMTG00000018554 ENSTMTG00000018535 ##22 ENSTMTG00000018575 ENSTMTG00000000021 ENSTMTG00000000026 ENSTMTG00000000028 ENSTMTG00000000032 ENSTMTG00000000038 ENSTMTG00000000041 ENSTMTG00000000095 ENSTMTG00000000198 ENSTMTG00000000208 ENSTMTG00000000221 ENSTMTG00000000229 ENSTMTG00000000241 ENSTMTG00000000271 ENSTMTG00000000326 painted turtle MODERN SPECIES 736 POLA1 (ENSCPBG00000006090) ARX (ENSCPBG00000006119) EIF1AY (ENSCPBG00000006126) RPS6KA3 (ENSCPBG00000006134) CNKSR2 (ENSCPBG00000006176) ENSCPBG00000006217 KLHL34 (ENSCPBG00000006220) SMPX (ENSCPBG00000006223) MBTPS2 (ENSCPBG00000006245) SMS (ENSCPBG00000006251) PHEX (ENSCPBG00000006283) ENSCPBG00000006687 PTCHD1 (ENSCPBG00000006695) PRDX4 (ENSCPBG00000006704) ACOT9 (ENSCPBG00000006727) SAT1 (ENSCPBG00000006749) ##22 APOO (ENSCPBG00000006759) ENSCPBG00000006769 KLHL15 (ENSCPBG00000006784) ENSCPBG00000006795 ENSCPBG00000006809 ENSCPBG00000006822 SCML2 (ENSCPBG00000006826) CDKL5 (ENSCPBG00000006856) RS1 (ENSCPBG00000006888) PPEF1 (ENSCPBG00000006896) PHKA2 (ENSCPBG00000006946) ADGRG2 (ENSCPBG00000007007) ENSCPBG00000007039 ENSCPBG00000007047 MAP3K15 (ENSCPBG00000007064) Testudinidae ANCESTRAL SPECIES ENSGT00950000183163.b.a ENSGT00950000182941.b.b ENSGT00390000008256.b ENSGT01030000235848 ENSGT00390000008256.a ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000158684 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 Abingdon island giant tortoise MODERN SPECIES 2231 ENSCABG00000010692 ENSCABG00000010693 PRDX4 (ENSCABG00000010696) ACOT9 (ENSCABG00000010703) SAT1 (ENSCABG00000010810) ##22 APOO (ENSCABG00000010812) ENSCABG00000010816 KLHL15 (ENSCABG00000010817) ENSCABG00000010825 Goode s thornscrub tortoise MODERN SPECIES SH3KBP1 (ENSGEVG00005002292) BCLAF3 (ENSGEVG00005002402) MAP7D2 (ENSGEVG00005002440) EIF1AY (ENSGEVG00005002462) RPS6KA3 (ENSGEVG00005002477) CNKSR2 (ENSGEVG00005002617) KLHL34 (ENSGEVG00005002967) SMPX (ENSGEVG00005002981) MBTPS2 (ENSGEVG00005002992) SMS (ENSGEVG00005003013) PHEX (ENSGEVG00005003058) ENSGEVG00005003120 ENSGEVG00005003126 PRDX4 (ENSGEVG00005003135) ACOT9 (ENSGEVG00005003156) SAT1 (ENSGEVG00005003187) ##22 APOO (ENSGEVG00005003193) ENSGEVG00005003208 KLHL15 (ENSGEVG00005003225) ENSGEVG00005003231 ENSGEVG00005003244 ENSGEVG00005003261 PDK3 (ENSGEVG00005003283) PCYT1B (ENSGEVG00005003300) POLA1 (ENSGEVG00005003400) ARX (ENSGEVG00005003655) IL1RAPL1 (ENSGEVG00005003678) NR0B1 (ENSGEVG00005003701) ENSGEVG00005003717 TAB3 (ENSGEVG00005003773) ENSGEVG00005003808 Chinese turtle MODERN SPECIES 223 PTCHD1 (ENSPSIG00000014564) PRDX4 (ENSPSIG00000014578) ACOT9 (ENSPSIG00000014884) SAT1 (ENSPSIG00000014973) ##22 KLHL15 (ENSPSIG00000015199) ENSPSIG00000015338 ENSPSIG00000015375 ENSPSIG00000016052 ENSPSIG00000016057 PDK3 (ENSPSIG00000006690) PCYT1B (ENSPSIG00000009265) POLA1 (ENSPSIG00000009291) Anura ANCESTRAL SPECIES 110 ENSGT00530000063975 ENSGT00940000154762.a.b ENSGT00940000165067 ENSGT00390000015880 ENSGT00940000162428 ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00510000048674 ENSGT00940000154006.b ENSGT00390000018559 ENSGT00950000183203.d ENSGT00940000156009.A.h ENSGT00940000156673 ENSGT00940000164731 ENSGT00550000074801 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000028309 ENSLLEG00000028398 HSF5 (ENSLLEG00000028419) ENSLLEG00000028470 RNF43 (ENSLLEG00000028488) SUPT4H1 (ENSLLEG00000028523) ENSLLEG00000028657 ENSLLEG00000029004 ENSLLEG00000029021 GDPD1 (ENSLLEG00000029069) ENSLLEG00000029158 ENSLLEG00000029170 ENSLLEG00000029182 ENSLLEG00000029223 ENSLLEG00000029248 SAT1 (ENSLLEG00000029495) ##22 KLHL15 (ENSLLEG00000029543) ENSLLEG00000029654 ENSLLEG00000029672 PRDX4 (ENSLLEG00000029696) PTCHD1 (ENSLLEG00000000395) ENSLLEG00000000402 ENSLLEG00000000415 PHEX (ENSLLEG00000000437) SMS (ENSLLEG00000000492) ENSLLEG00000000511 SMPX (ENSLLEG00000000522) KLHL34 (ENSLLEG00000000544) CNKSR2 (ENSLLEG00000000621) ENSLLEG00000000962 RPS6KA3 (ENSLLEG00000001162) Frog MODERN SPECIES 2 mtmr4 (ENSXETG00000007790) ENSXETG00000036659 ENSXETG00000042390 hpd-like.2 (ENSXETG00000007789) hsf5 (ENSXETG00000033030) rnf43 (ENSXETG00000037241) supt4h1 (ENSXETG00000040160) ENSXETG00000048486 tspoap1 (ENSXETG00000034008) mpo (ENSXETG00000007787) gdpd1 (ENSXETG00000007786) zfx (ENSXETG00000007785) adamts3 (ENSXETG00000006225) acot9 (ENSXETG00000006223) arsd (ENSXETG00000006221) sat1 (ENSXETG00000006219) ##22 apoo (ENSXETG00000006218) cxorf58 (ENSXETG00000025336) klhl15 (ENSXETG00000034785) atg16l2 (ENSXETG00000006212) map3k15 (ENSXETG00000006210) sh3kbp1 (ENSXETG00000006205) ENSXETG00000048959 bclaf3 (ENSXETG00000031425) map7d2 (ENSXETG00000006203) eif1ax (ENSXETG00000034472) ENSXETG00000039947 rps6ka3 (ENSXETG00000010285) cnksr2 (ENSXETG00000010286) ENSXETG00000043747 klhl34 (ENSXETG00000003854) Coelacanth MODERN SPECIES 2827 PRDX4 (ENSLACG00000002171) ACOT9 (ENSLACG00000003375) SAT1 (ENSLACG00000004527) ##22 APOO (ENSLACG00000004870) ENSLACG00000006544 Actinopterygii ANCESTRAL SPECIES 26 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000164731 ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000004601 ENSGT00390000007133 ENSGT00940000155053 ENSGT00390000010734 ENSGT00940000166463 Neopterygii ANCESTRAL SPECIES 55 ENSGT00940000159906 ENSGT00940000164851 ENSGT00940000157080 ENSGT00940000157313 ENSGT00870000136506 ENSGT00510000048066 ENSGT00390000017542 ENSGT00940000162424 ENSGT00940000156709 ENSGT00940000155886 ENSGT00940000159562 ENSGT00530000063174.a ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b ##22 ENSGT00530000063666.b ENSGT00940000167353 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000164731 ENSGT01050000244868 ENSGT00440000034309 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845 ENSGT00940000159661 ENSGT00530000063679.A Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 99 ENSGT00530000063174.a.k ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000164731 ENSGT01050000244868 ENSGT00440000034309 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 ENSGT00530000063679.A ENSGT00940000154110.b Osteoglossiformes ANCESTRAL SPECIES 67 ENSGT01030000234935 ENSGT00940000157080 ENSGT00940000157313 ENSGT00870000136506 ENSGT00510000048066 ENSGT00390000017542 ENSGT00940000162424 ENSGT00940000156709.a ENSGT00950000183163.b ENSGT00950000182941.b.b.b.a ENSGT00390000008256 ENSGT00940000159370.b ENSGT00530000063174.a.k ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000164731.f ENSGT00440000034309 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000165845.c.a ENSGT00940000159661 ENSGT00530000063679.A ENSGT00940000154110.b ENSGT00940000156558 ENSGT00940000158013 ENSGT00550000074787.c.a ENSGT00390000009110 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 16 PTCHD1 (ENSSFOG00015029116) phex (ENSSFOG00015017417) sms (ENSSFOG00015017358) mbtps2 (ENSSFOG00015017325) smpx (ENSSFOG00015017313) KLHL34 (ENSSFOG00015029024) CNKSR2 (ENSSFOG00015017278) ENSSFOG00015017263 ENSSFOG00015017260 ENSSFOG00015031597 ENSSFOG00015030262 rps6ka3b (ENSSFOG00015017183) pdha1b (ENSSFOG00015017120) prdx4 (ENSSFOG00015017085) acot9.2 (ENSSFOG00015016982) sat1b (ENSSFOG00015016956) ##22 klhl15 (ENSSFOG00015027608) eif2s3 (ENSSFOG00015016920) ENSSFOG00015028584 c8g (ENSSFOG00015016877) KPNA1 (ENSSFOG00015016843) ENSSFOG00015016835 mix23 (ENSSFOG00015016820) ENSSFOG00015016803 ENSSFOG00015016785 qtrt2 (ENSSFOG00015016750) ccdc191 (ENSSFOG00015016617) zdhhc23b (ENSSFOG00015016585) GRAMD1C (ENSSFOG00015016504) ATP6V1A (ENSSFOG00015016444) naa50 (ENSSFOG00015016422) Asian bonytongue MODERN SPECIES 18 PDK3 (ENSSFOG00015024813) pcyt1bb (ENSSFOG00015012860) ARX (ENSSFOG00015012891) ccdc82 (ENSSFOG00015012931) poglut3 (ENSSFOG00015012938) ENSSFOG00015012999 ENSSFOG00015013138 lipia (ENSSFOG00015013156) MAP7D2 (ENSSFOG00015013180) ENSSFOG00015013214 ENSSFOG00015025700 ENSSFOG00015031058 RPS6KA3 (ENSSFOG00015013306) pld6 (ENSSFOG00015013389) pdha1a (ENSSFOG00015013412) sat1b (ENSSFOG00015028647) ##22 sat1a.2 (ENSSFOG00015013511) ##22 apooa (ENSSFOG00015013529) klhl15 (ENSSFOG00015013554) ENSSFOG00015013578 ptgdsb.1 (ENSSFOG00015013652) cst14a.1 (ENSSFOG00015013664) ENSSFOG00015029480 ENSSFOG00015029601 ENSSFOG00015013695 pan3 (ENSSFOG00015013716) ENSSFOG00015013788 clec14a (ENSSFOG00015013793) sec23a (ENSSFOG00015013820) srp54 (ENSSFOG00015013920) zgc:109986 (ENSSFOG00015013998) P. kingsleyae MODERN SPECIES 532 sat1b (ENSPKIG00000025211) ##22 klhl15 (ENSPKIG00000025208) eif2s3 (ENSPKIG00000025202) ENSPKIG00000025189 c8g (ENSPKIG00000025185) KPNA1 (ENSPKIG00000025167) fam162a (ENSPKIG00000025151) mix23 (ENSPKIG00000025147) ENSPKIG00000025135 ENSPKIG00000025124 ndufb4 (ENSPKIG00000025118) hgd (ENSPKIG00000025095) ARX (ENSPKIG00000025084) pola1 (ENSPKIG00000025070) pcyt1ba (ENSPKIG00000025057) pdk3b (ENSPKIG00000025049) Clupeocephala ANCESTRAL SPECIES 207 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00530000063666.b.db ENSGT01090000261942 ENSGT00950000182962.a.a.c ENSGT00940000155647.bb ENSGT00390000014424 ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000164731 ENSGT01050000244868 ENSGT00440000034309 ENSGT00940000155240.B ENSGT00940000157476 ENSGT00940000156508 ENSGT00900000141099 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000157711 ENSGT00940000153451.a.b Otomorpha ANCESTRAL SPECIES 111 ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000164731.l ENSGT01050000244868 ENSGT00440000034309 ENSGT00940000155240.B ENSGT00940000157476 ENSGT00940000156508.j ENSGT00940000153451.a.b ENSGT00940000157711 ENSGT00390000015971 ENSGT00940000156042 ENSGT00900000141099 ENSGT00940000162104 Otophysi ANCESTRAL SPECIES 42 ENSGT00940000158381 ENSGT00390000003643 ENSGT00940000163955 ENSGT00390000002395 ENSGT00940000167274 ENSGT00390000001504 ENSGT00940000158713 ENSGT00940000165120 ENSGT00940000160085 ENSGT00940000154103.a ENSGT00940000176911 ENSGT00940000154936 ENSGT00940000159385.a.a ENSGT00390000017765.b ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00390000012054.a Characiphysae ANCESTRAL SPECIES 17 ENSGT00940000158381 ENSGT00390000003643 ENSGT00940000163955 ENSGT00390000002395 ENSGT00940000167274 ENSGT00390000001504 ENSGT00940000158713 ENSGT00940000165120 ENSGT00940000160085 ENSGT00940000154103.a ENSGT00940000176911 ENSGT00940000154936 ENSGT00940000159385.a.a ENSGT00390000017765.b ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00390000012054.a ENSGT00940000166463 ENSGT00390000001844.a.a ENSGT00940000159227 ENSGT00940000157145 ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256.sd ENSGT00980000201894 ENSGT00390000008256.rd.b ENSGT00940000159370.d ENSGT00530000063174.a.k Characiphysae_b ANCESTRAL SPECIES 52 ENSGT00940000158381 ENSGT00390000003643 ENSGT00940000163955 ENSGT00390000002395 ENSGT00940000167274 ENSGT00390000001504 ENSGT00940000158713 ENSGT00940000165120 ENSGT00940000160085 ENSGT00940000154103.a ENSGT00970000197361 ENSGT00940000154936 ENSGT00940000159385.a.a ENSGT00390000017765.b ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00390000012054.a ENSGT00940000166463 ENSGT00390000001844.a.a ENSGT00940000159227 ENSGT00940000157145 ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256.sd ENSGT00980000201894 ENSGT00390000008256.rd.b ENSGT00940000159370.d ENSGT00530000063174.a.k Characoidei ANCESTRAL SPECIES 14 ENSGT00940000158381 ENSGT00390000003643 ENSGT00940000163955 ENSGT00390000002395 ENSGT00940000167274 ENSGT00390000001504 ENSGT00940000158713 ENSGT00940000165120 ENSGT00940000160085 ENSGT00940000154103.a ENSGT00970000197361 ENSGT00940000154936 ENSGT00940000159385.a.a ENSGT00390000017765.b ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00390000012054.a ENSGT00940000166463 ENSGT00390000001844.a.a ENSGT00940000159227 ENSGT00940000157145 ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256.sd ENSGT00980000201894 ENSGT00940000159370.d ENSGT00530000063174.a.k ENSGT00940000158777 Red-bellied piranha MODERN SPECIES 455 lnx2a (ENSPNAG00000025260) si:ch211-140b10.6 (ENSPNAG00000025278) pdx1 (ENSPNAG00000005255) urad (ENSPNAG00000025313) ENSPNAG00000025336 pan3 (ENSPNAG00000025422) flt1 (ENSPNAG00000025453) ENSPNAG00000025490 ENSPNAG00000025514 ENSPNAG00000025561 ENSPNAG00000003934 c1qtnf9 (ENSPNAG00000025597) ENSPNAG00000025618 tagln3b (ENSPNAG00000005152) acot9.2 (ENSPNAG00000005257) sat1b (ENSPNAG00000025741) ##22 Mexicana tetra MODERN SPECIES 18 pdx1 (ENSAMXG00000031179) urad (ENSAMXG00000014396) ENSAMXG00000014377 pan3 (ENSAMXG00000014360) flt1 (ENSAMXG00000014301) ENSAMXG00000030254 ENSAMXG00000043708 ENSAMXG00000014196 ENSAMXG00000032802 c1qtnf9 (ENSAMXG00000042750) TAGLN3 (ENSAMXG00000014160) tagln3b (ENSAMXG00000030363) ENSAMXG00000034366 ENSAMXG00000035523 acot9.2 (ENSAMXG00000014122) sat1b (ENSAMXG00000029966) ##22 apoob (ENSAMXG00000014089) si:rp71-1f1.4 (ENSAMXG00000032627) ENSAMXG00000014069 chodl (ENSAMXG00000014033) lyz (ENSAMXG00000014017) ENSAMXG00000042503 ENSAMXG00000039498 zgc:112408 (ENSAMXG00000013983) ENSAMXG00000013967 ENSAMXG00000013954 ENSAMXG00000013940 eif1axb (ENSAMXG00000032495) ENSAMXG00000040423 rps6ka3b (ENSAMXG00000013900) ENSAMXG00000030935 Electric eel MODERN SPECIES 78 pan3 (ENSEEEG00000013875) flt1 (ENSEEEG00000013838) ENSEEEG00000013836 ENSEEEG00000013787 ENSEEEG00000013786 c1qtnf9 (ENSEEEG00000013782) ENSEEEG00000013780 tagln3b (ENSEEEG00000013779) acot9.2 (ENSEEEG00000013706) sat1b (ENSEEEG00000013700) ##22 apoob (ENSEEEG00000013698) ENSEEEG00000013696 chodl (ENSEEEG00000013695) ENSEEEG00000013694 zgc:112408 (ENSEEEG00000013673) ENSEEEG00000013663 zgc:112982 (ENSEEEG00000013662) ENSEEEG00000013658 eif1axb (ENSEEEG00000013657) ENSEEEG00000013655 rps6ka3b (ENSEEEG00000010781) ythdf3 (ENSEEEG00000010656) bhlhe22 (ENSEEEG00000010653) armc1 (ENSEEEG00000010651) mtfr1 (ENSEEEG00000010649) Cyprinoidei ANCESTRAL SPECIES 20 ENSGT00390000003643 ENSGT00940000163955 ENSGT00390000002395 ENSGT00940000167274 ENSGT00390000001504.g ENSGT00940000158713 ENSGT00940000165120 ENSGT00940000160085 ENSGT00940000154103.a ENSGT00970000197361 ENSGT00940000154936 ENSGT00940000159385.a.a ENSGT00390000017765.b ENSGT00390000005330.f ENSGT00390000005330.e ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00390000012054.a ENSGT00390000012731.a.a ENSGT00500000044852.a.a.a ENSGT00940000154574.c ENSGT00940000154952.a.b ENSGT00940000159419 ENSGT00970000194071 ENSGT00390000001846 ENSGT00940000159542 ENSGT00940000158224 ENSGT00390000017600 ENSGT00550000074850.x ENSGT00940000158260 ENSGT00940000162447 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 414 ENSGT00390000003643.o ENSGT00940000163955.l ENSGT00390000002395.c ENSGT00940000167274.f ENSGT00390000001504.g.a.a ENSGT00940000158713.b ENSGT00940000165120.d ENSGT00940000160085 ENSGT00940000154103.a.f ENSGT00970000197361 ENSGT00940000154103.a.e ENSGT00940000154936 ENSGT00940000159385.a.a.b ENSGT00390000017765.b.a.b ENSGT00390000005330.e.a ENSGT00950000183121.b.b.b.b.w.c ##22 ENSGT00530000063666.b.eb.a Goldfish DUPLICATION Goldfish MODERN SPECIES 2807 ENSCARG00000058167 acot9.1 (ENSCARG00000058095) sat1b (ENSCARG00000058029) ##22 apoob (ENSCARG00000057965) ENSCARG00000057954 ENSCARG00000057951 Goldfish MODERN SPECIES 16 lnx2a (ENSCARG00000013796) si:ch211-140b10.6 (ENSCARG00000013805) pdx1 (ENSCARG00000013807) urad (ENSCARG00000013810) ENSCARG00000013815 pan3 (ENSCARG00000013889) flt1 (ENSCARG00000015256) ENSCARG00000015493 TMPRSS7 (ENSCARG00000015505) ENSCARG00000015523 c1qtnf9 (ENSCARG00000015611) ENSCARG00000015615 TAGLN3 (ENSCARG00000015616) tagln3b (ENSCARG00000015621) acot9.1 (ENSCARG00000015661) sat1b (ENSCARG00000016102) ##22 apoob (ENSCARG00000016145) ENSCARG00000016173 ENSCARG00000016176 ENSCARG00000016199 zc2hc1a (ENSCARG00000016318) ENSCARG00000016349 ENSCARG00000009831 ENSCARG00000009836 ENSCARG00000009846 ENSCARG00000009867 ENSCARG00000009874 ENSCARG00000009877 ENSCARG00000009886 ENSCARG00000009898 ENSCARG00000009907 Cyprininae_a ANCESTRAL SPECIES 795 ENSGT00390000017765.b.a.b ENSGT00390000005330.e.a ENSGT00950000183121.b.b.b.b.w.c ##22 ENSGT00530000063666.b.eb.a Common carp reference MODERN SPECIES 40 usp12a (ENSCCRG00000022679) gtf3ab (ENSCCRG00000005024) pdx1 (ENSCCRG00000068168) ENSCCRG00000005031 ENSCCRG00000080210 pan3 (ENSCCRG00000041721) flt1 (ENSCCRG00000045302) ENSCCRG00000076389 ENSCCRG00000020183 ENSCCRG00000020192 ENSCCRG00000072456 c1qtnf9 (ENSCCRG00000067067) ENSCCRG00000020201 acot9.2 (ENSCCRG00000020210) acot9.1 (ENSCCRG00000020323) sat1b (ENSCCRG00000069688) ##22 apoob (ENSCCRG00000021083) ENSCCRG00000021106 ropn1l (ENSCCRG00000007568) ENSCCRG00000001477 ENSCCRG00000064652 ENSCCRG00000067982 ENSCCRG00000010505 ENSCCRG00000076176 zc2hc1a (ENSCCRG00000057912) ENSCCRG00000062404 pex2 (ENSCCRG00000062254) ENSCCRG00000037676 ZFHX4 (ENSCCRG00000062942) hnf4g (ENSCCRG00000041648) cops5 (ENSCCRG00000041384) Golden-line barbel MODERN SPECIES 138 GPR12 (ENSSGRG00000025122) usp12a (ENSSGRG00000025100) rpl21 (ENSSGRG00000025099) gtf3ab (ENSSGRG00000025066) ENSSGRG00000025064 lnx2a (ENSSGRG00000025063) si:ch211-140b10.6 (ENSSGRG00000025062) pdx1 (ENSSGRG00000025061) pan3 (ENSSGRG00000024997) flt1 (ENSSGRG00000024840) ENSSGRG00000024834 TMPRSS7 (ENSSGRG00000024833) ENSSGRG00000024787 tagln3b (ENSSGRG00000024784) acot9.1 (ENSSGRG00000024644) sat1b (ENSSGRG00000024639) ##22 apoob (ENSSGRG00000024638) ropn1l (ENSSGRG00000024636) ENSSGRG00000024635 ENSSGRG00000024634 ENSSGRG00000024633 dap (ENSSGRG00000024632) ENSSGRG00000023547 Cyprininae ANCESTRAL SPECIES 45 ENSGT00940000153284.a.mc.b.d ENSGT00950000182922.b.k ENSGT00940000155647.cb.b ENSGT00940000158381.d ENSGT00390000003643.p ENSGT00940000163955.k ENSGT00390000002395.d ENSGT00940000167274.e ENSGT00390000001504.g.b ENSGT00390000001504.g.a.b ENSGT00940000158713.a ENSGT00940000165120.c ENSGT00940000159385.a.a.a ENSGT00390000017765.b.a.a ENSGT00390000005330.e.b ENSGT00950000183121.b.b.b.b.w.d ##22 ENSGT00530000063666.b.eb.b ENSGT00390000012054.a ENSGT00390000012731.a.a ENSGT00500000044852.a.a.a.c ENSGT00940000154574.c ENSGT00940000154952.a.b.rb.a ENSGT00940000159419.d ENSGT00500000044852.a.a.a.d ENSGT01090000260283 ENSGT00940000154952.a.b.rb.b ENSGT00940000159419.c ENSGT00970000194071.b ENSGT00390000001846.b ENSGT00940000159542.a ENSGT00940000158224.s Cyprininae_a ANCESTRAL SPECIES 57 ENSGT00940000155647.cb.b ENSGT00940000158381.d ENSGT00390000003643.p ENSGT00940000163955.k ENSGT00390000002395.d ENSGT00940000167274.e ENSGT00390000001504.g.b ENSGT00390000001504.g.a.b ENSGT00940000158713.a ENSGT00940000165120.c ENSGT00940000159385.a.a.a ENSGT00390000017765.b.a.a ENSGT00390000005330.f ENSGT00390000017765.b.b ENSGT00390000005330.e.b ENSGT00950000183121.b.b.b.b.w.d ##22 ENSGT00530000063666.b.eb.b ENSGT01030000236679 ENSGT00390000012731.a.a.d ENSGT00500000044852.a.a.a.c Common carp reference MODERN SPECIES 14 wasf3b (ENSCCRG00000073791) usp12a (ENSCCRG00000007576) ENSCCRG00000066603 rpl21 (ENSCCRG00000007511) lnx2a (ENSCCRG00000007712) pdx1 (ENSCCRG00000027679) urad (ENSCCRG00000080030) ENSCCRG00000077937 pan3 (ENSCCRG00000027699) flt1 (ENSCCRG00000027874) ENSCCRG00000067037 ENSCCRG00000015594 ENSCCRG00000015584 tagln3b (ENSCCRG00000073126) acot9.1 (ENSCCRG00000017567) sat1b (ENSCCRG00000020336) ##22 ropn1l (ENSCCRG00000017552) si:rp71-1f1.4 (ENSCCRG00000060532) ENSCCRG00000071460 dap (ENSCCRG00000075983) ENSCCRG00000058258 ENSCCRG00000067662 ENSCCRG00000037680 zc2hc1a (ENSCCRG00000077102) pex2 (ENSCCRG00000015111) ZFHX4 (ENSCCRG00000053912) hnf4g (ENSCCRG00000037552) ENSCCRG00000063254 cops5 (ENSCCRG00000014593) pign (ENSCCRG00000014674) ppp1r42 (ENSCCRG00000014587) Golden-line barbel MODERN SPECIES 64 gtf3ab (ENSSGRG00000046517) lnx2a (ENSSGRG00000046521) si:ch211-140b10.6 (ENSSGRG00000046522) pdx1 (ENSSGRG00000046523) urad (ENSSGRG00000046524) flt1 (ENSSGRG00000046525) ENSSGRG00000046530 pan3 (ENSSGRG00000046534) ENSSGRG00000046657 ENSSGRG00000046659 ENSSGRG00000046660 c1qtnf9 (ENSSGRG00000046661) TAGLN3 (ENSSGRG00000046662) tagln3b (ENSSGRG00000046664) acot9.1 (ENSSGRG00000046678) sat1b (ENSSGRG00000046891) ##22 apoob (ENSSGRG00000046892) ENSSGRG00000046893 ropn1l (ENSSGRG00000046894) ENSSGRG00000046895 dap (ENSSGRG00000046897) ENSSGRG00000046898 Zebrafish MODERN SPECIES 16 gtf3ab (ENSDARG00000071583) lnx2a (ENSDARG00000029177) si:ch211-140b10.6 (ENSDARG00000045342) pdx1 (ENSDARG00000002779) urad (ENSDARG00000071579) ENSDARG00000058503 pan3 (ENSDARG00000031637) flt1 (ENSDARG00000019371) ENSDARG00000062758 ENSDARG00000116575 ENSDARG00000062837 c1qtnf9 (ENSDARG00000058318) tagln3b (ENSDARG00000058394) acot9.2 (ENSDARG00000058390) acot9.1 (ENSDARG00000058352) sat1b (ENSDARG00000032272) ##22 apoob (ENSDARG00000026444) si:rp71-1f1.4 (ENSDARG00000092476) ENSDARG00000114335 ENSDARG00000110278 ropn1l (ENSDARG00000058370) ANKRD33B (ENSDARG00000058357) dap (ENSDARG00000000069) ENSDARG00000062415 ENSDARG00000095252 ENSDARG00000092045 zc2hc1a (ENSDARG00000027915) si:dkey-7n6.2 (ENSDARG00000094602) pex2 (ENSDARG00000062421) ZFHX4 (ENSDARG00000075542) hnf4g (ENSDARG00000071565) Clupeiformes ANCESTRAL SPECIES 47 ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000164731.l ENSGT01050000244868.e ENSGT00440000034309 ENSGT00940000155240.B ENSGT00940000157476 ENSGT00940000156508.j ENSGT00940000153451.a.b ENSGT00940000157711 ENSGT00390000015971 ENSGT00940000156042 ENSGT00900000141099 ENSGT00940000162104 Denticle herring MODERN SPECIES 11 skilb (ENSDCDG00000035623) ENSDCDG00000035624 ENSDCDG00000035628 CLDN11 (ENSDCDG00000035630) apodb (ENSDCDG00000035632) otos (ENSDCDG00000035635) cops9 (ENSDCDG00000035636) and1 (ENSDCDG00000035637) ENSDCDG00000035639 tmtopsb (ENSDCDG00000035640) ENSDCDG00000035644 ENSDCDG00000035648 rps6ka3b (ENSDCDG00000035665) ENSDCDG00000035674 acot9.2 (ENSDCDG00000035675) sat1b (ENSDCDG00000035679) ##22 apoob (ENSDCDG00000035682) klhl15 (ENSDCDG00000035686) eif2s3 (ENSDCDG00000035700) ENSDCDG00000035711 ptgdsb.1 (ENSDCDG00000035718) c8g (ENSDCDG00000035723) msrb2 (ENSDCDG00000035726) ARMC3 (ENSDCDG00000035730) pip4k2aa (ENSDCDG00000035733) ENSDCDG00000035741 ENSDCDG00000035742 MLLT10 (ENSDCDG00000035748) commd3 (ENSDCDG00000035751) BMI1 (ENSDCDG00000035753) spag6 (ENSDCDG00000035754) Euteleosteomorpha ANCESTRAL SPECIES 135 ENSGT01070000253816.b.c ENSGT00390000016814.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000155920 ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00510000046981.b.a.d ENSGT00390000011600 ENSGT00390000000076 ENSGT00500000045505.b ENSGT01100000263502.A.a.a.b.a.a ENSGT00940000160853 ENSGT01030000234826 ENSGT01030000234598.a.a.a.a ENSGT00990000204463 Protacanthopterygii ANCESTRAL SPECIES 70 ENSGT00940000163670.a ENSGT00940000163670.b.a.gb ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256.wd ENSGT00940000159370.e.a ENSGT01030000235646 ENSGT00390000008256.vd.b ENSGT00940000159370.e.b ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00510000046981.b.a.d ENSGT00390000011600 ENSGT00390000000076 ENSGT00500000045505.b ENSGT01100000263502.A.a.a.b.a.a ENSGT00940000160853 ENSGT01030000234598.a.a.a.a ENSGT00990000205902 ENSGT00940000159562 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 928 ENSGT00950000183121.b.b.b.b.w.e.a ##22 ENSGT00530000063666.b.eb.c ENSGT00940000159116.c ENSGT00550000074801.e ENSGT00940000161266.a.b ENSGT00940000175687.a ENSGT00510000046981.b.a.d Salmoninae_a ANCESTRAL SPECIES 35 ENSGT01070000253816.b.c.b ENSGT00390000016814.a.d ENSGT00990000206793.a.b.a ENSGT01090000260281.b.a ENSGT00940000163670.b.a.hb ENSGT00940000153251.a ENSGT00940000155920.k.b ENSGT00940000166938.d ENSGT00950000183163.b.n ENSGT00950000182941.b.b.b.b ENSGT00390000008256.wd.a.b ENSGT00940000159370.e.a ENSGT00530000063174.a.k.c.b ENSGT00390000005330.g ENSGT00950000183121.b.b.b.b.w.e.b ##22 ENSGT00950000183121.b.b.b.b.w.e.a ##22 ENSGT00530000063666.b.eb.c ENSGT00940000159116.c ENSGT00550000074801.e ENSGT00940000161266.a.b ENSGT00940000175687.a ENSGT00510000046981.b.a.d ENSGT00390000011600.h ENSGT00940000175687.b ENSGT00990000210368 ENSGT00390000011600.g ENSGT00390000000076 ENSGT00500000045505.b.g ENSGT01100000263502.A.a.a.b.a.a ENSGT00940000160853.f ENSGT01030000234598.a.a.a.a.c Salmo ANCESTRAL SPECIES 34 ENSGT00940000163670.a ENSGT00940000163670.b.a.gb.a ENSGT01070000255370 ENSGT00940000153251.a ENSGT00940000155920.k.b ENSGT00940000166938.d ENSGT00950000183163.b.n ENSGT01030000235646.a ENSGT00950000183121.b.b.b.b.w.e.b ##22 ENSGT00390000005330.g ENSGT00950000183121.b.b.b.b.w.e.a ##22 ENSGT00530000063666.b.eb.c ENSGT00940000159116.c ENSGT00550000074801.e ENSGT00940000161266.a.b ENSGT00940000175687.a ENSGT00510000046981.b.a.d ENSGT00390000011600.h ENSGT00980000198875.g.a ENSGT01090000260281.b.b.a ENSGT00500000045505.b.g ENSGT01100000263502.A.a.a.b.a.a ENSGT00940000160853.f ENSGT01030000234598.a.a.a.a.c ENSGT00990000205902.b.b ENSGT00940000155886.r River trout MODERN SPECIES 36 ENSSTUG00000038258 ENSSTUG00000038269 ENSSTUG00000038312 ENSSTUG00000039160 ENSSTUG00000039205 ENSSTUG00000039241 ENSSTUG00000039273 cip2a (ENSSTUG00000039291) ENSSTUG00000039329 ENSSTUG00000039338 ENSSTUG00000039362 ENSSTUG00000039377 ENSSTUG00000039381 sat1b (ENSSTUG00000039386) ##22 ACOT9 (ENSSTUG00000039413) sat1b (ENSSTUG00000039524) ##22 apoob (ENSSTUG00000039550) klhl15 (ENSSTUG00000039571) eif2s3 (ENSSTUG00000039599) ENSSTUG00000039661 apodb (ENSSTUG00000039682) otos (ENSSTUG00000039728) ENSSTUG00000039734 ENSSTUG00000039742 and1 (ENSSTUG00000039750) ENSSTUG00000039758 tfr1b (ENSSTUG00000039772) ENSSTUG00000039972 ENSSTUG00000040016 ENSSTUG00000040024 drd3 (ENSSTUG00000040051) Atlantic salmon MODERN SPECIES 21 ENSSSAG00000118236 ENSSSAG00000116217 ENSSSAG00000121263 ENSSSAG00000078120 kiaa1524 (ENSSSAG00000078099) ENSSSAG00000078092 ENSSSAG00000078074 ENSSSAG00000088995 ENSSSAG00000078061 ENSSSAG00000099356 ENSSSAG00000076877 RPS6KA3 (ENSSSAG00000077150) pdha1b (ENSSSAG00000080177) sat1b (ENSSSAG00000111429) ##22 ACOT9 (ENSSSAG00000109432) SAT1 (ENSSSAG00000078009) ##22 ENSSSAG00000112612 apoob (ENSSSAG00000097184) ENSSSAG00000099404 KLHL15 (ENSSSAG00000077983) ENSSSAG00000077932 ENSSSAG00000106166 ENSSSAG00000077916 ENSSSAG00000080287 apod (ENSSSAG00000077906) ENSSSAG00000077895 ENSSSAG00000077888 ENSSSAG00000094346 ENSSSAG00000099188 ENSSSAG00000088452 tfr1b (ENSSSAG00000116067) Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183121.b.b.b.b.w.e.a ##22 Rainbow trout MODERN SPECIES 6 ENSOMYG00000061118 ENSOMYG00000003890 ENSOMYG00000063126 ENSOMYG00000009544 ENSOMYG00000075911 ENSOMYG00000009689 ENSOMYG00000059277 ENSOMYG00000009741 ENSOMYG00000061987 ENSOMYG00000009814 ENSOMYG00000009891 ENSOMYG00000009940 RPS6KA3 (ENSOMYG00000048494) ENSOMYG00000077429 ENSOMYG00000009989 sat1 (ENSOMYG00000010129) ##22 ACOT9 (ENSOMYG00000010388) APOO (ENSOMYG00000010708) ENSOMYG00000067769 KLHL15 (ENSOMYG00000010735) ENSOMYG00000010773 ENSOMYG00000070468 ENSOMYG00000010797 ENSOMYG00000070606 ENSOMYG00000059936 apodb (ENSOMYG00000010815) ENSOMYG00000010821 and1 (ENSOMYG00000010833) ENSOMYG00000071365 ENSOMYG00000052467 tfr1b (ENSOMYG00000010849) Huchen MODERN SPECIES 3096 sat1b (ENSHHUG00000027562) ##22 APOO (ENSHHUG00000027556) eif2s3 (ENSHHUG00000027477) klhl15 (ENSHHUG00000027466) ENSHHUG00000027463 ENSHHUG00000027452 ENSHHUG00000027449 apodb (ENSHHUG00000027441) otos (ENSHHUG00000027426) cops9 (ENSHHUG00000027421) and1 (ENSHHUG00000027418) Salmoninae ANCESTRAL SPECIES 563 ENSGT00940000157755.r.e ENSGT00940000159906.f.g.a ENSGT00940000163670.a ENSGT00940000163670.b.a.gb.a ENSGT01070000255370 ENSGT00940000163670.b.a.hb ENSGT00940000153251.a ENSGT00940000155920.k.b ENSGT00940000166938.d ENSGT00950000183163.b.n ENSGT00950000182941.b.b.b.b ENSGT00390000008256.wd.a.b ENSGT00940000159370.e.a ENSGT00530000063174.a.k.c.b ENSGT00390000005330.g ENSGT00950000183121.b.b.b.b.w.e.b ##22 Huchen DUPLICATION Huchen DUPLICATION Huchen MODERN SPECIES 3179 sat1b (ENSHHUG00000008734) ##22 ACOT9 (ENSHHUG00000008868) ENSHHUG00000008871 SAT1 (ENSHHUG00000008881) ##22 Huchen MODERN SPECIES 3179 sat1b (ENSHHUG00000008734) ##22 ACOT9 (ENSHHUG00000008868) ENSHHUG00000008871 SAT1 (ENSHHUG00000008881) ##22 Huchen MODERN SPECIES 9291 sat1b (ENSHHUG00000037976) ##22 Salmoninae_a ANCESTRAL SPECIES 35 ENSGT00950000183196.B.e.e.a ENSGT01070000253816.b.c.b ENSGT00390000016814.a.d ENSGT00990000206793.a.b.a ENSGT01090000260281.b.a ENSGT00940000163670.b.a.hb ENSGT00940000153251.a ENSGT00940000155920.k.b ENSGT00940000166938.d ENSGT00950000183163.b.n ENSGT00950000182941.b.b.b.b ENSGT00390000008256.wd.a.b ENSGT00940000159370.e.a ENSGT00530000063174.a.k.c.b ENSGT00390000005330.g ENSGT00950000183121.b.b.b.b.w.e.b ##22 ENSGT00950000183121.b.b.b.b.w.e.a ##22 ENSGT00530000063666.b.eb.c ENSGT00940000159116.c ENSGT00550000074801.e ENSGT00940000161266.a.b ENSGT00940000175687.a ENSGT00510000046981.b.a.d ENSGT00390000011600.h ENSGT00940000175687.b ENSGT00990000210368 ENSGT00390000011600.g ENSGT00390000000076 ENSGT00500000045505.b.g ENSGT01100000263502.A.a.a.b.a.a ENSGT00940000160853.f Salmo ANCESTRAL SPECIES 34 ENSGT00940000163670.a ENSGT00940000163670.b.a.gb.a ENSGT01070000255370 ENSGT00940000153251.a ENSGT00940000155920.k.b ENSGT00940000166938.d ENSGT00950000183163.b.n ENSGT01030000235646.a ENSGT00950000183121.b.b.b.b.w.e.b ##22 ENSGT00390000005330.g ENSGT00950000183121.b.b.b.b.w.e.a ##22 ENSGT00530000063666.b.eb.c ENSGT00940000159116.c ENSGT00550000074801.e ENSGT00940000161266.a.b ENSGT00940000175687.a ENSGT00510000046981.b.a.d ENSGT00390000011600.h ENSGT00980000198875.g.a ENSGT01090000260281.b.b.a ENSGT00500000045505.b.g ENSGT01100000263502.A.a.a.b.a.a ENSGT00940000160853.f ENSGT01030000234598.a.a.a.a.c River trout MODERN SPECIES 36 msl2b (ENSSTUG00000038202) ENSSTUG00000038238 ENSSTUG00000038258 ENSSTUG00000038269 ENSSTUG00000038312 ENSSTUG00000039160 ENSSTUG00000039205 ENSSTUG00000039241 ENSSTUG00000039273 cip2a (ENSSTUG00000039291) ENSSTUG00000039329 ENSSTUG00000039338 ENSSTUG00000039362 ENSSTUG00000039377 ENSSTUG00000039381 sat1b (ENSSTUG00000039386) ##22 ACOT9 (ENSSTUG00000039413) sat1b (ENSSTUG00000039524) ##22 apoob (ENSSTUG00000039550) klhl15 (ENSSTUG00000039571) eif2s3 (ENSSTUG00000039599) ENSSTUG00000039661 apodb (ENSSTUG00000039682) otos (ENSSTUG00000039728) ENSSTUG00000039734 ENSSTUG00000039742 and1 (ENSSTUG00000039750) ENSSTUG00000039758 tfr1b (ENSSTUG00000039772) ENSSTUG00000039972 ENSSTUG00000040016 Atlantic salmon MODERN SPECIES 21 ENSSSAG00000062619 ENSSSAG00000078131 ENSSSAG00000118236 ENSSSAG00000116217 ENSSSAG00000121263 ENSSSAG00000078120 kiaa1524 (ENSSSAG00000078099) ENSSSAG00000078092 ENSSSAG00000078074 ENSSSAG00000088995 ENSSSAG00000078061 ENSSSAG00000099356 ENSSSAG00000076877 RPS6KA3 (ENSSSAG00000077150) pdha1b (ENSSSAG00000080177) sat1b (ENSSSAG00000111429) ##22 ACOT9 (ENSSSAG00000109432) SAT1 (ENSSSAG00000078009) ##22 ENSSSAG00000112612 apoob (ENSSSAG00000097184) ENSSSAG00000099404 KLHL15 (ENSSSAG00000077983) ENSSSAG00000077932 ENSSSAG00000106166 ENSSSAG00000077916 ENSSSAG00000080287 apod (ENSSSAG00000077906) ENSSSAG00000077895 ENSSSAG00000077888 ENSSSAG00000094346 ENSSSAG00000099188 Oncorhynchus ANCESTRAL SPECIES 27 ENSGT00390000016814.a.d ENSGT00990000206793.a.a ENSGT01090000260281.b.b.b ENSGT00940000158089.b.f ENSGT00950000182997.b.l.b.b.a ENSGT00940000163670.b.a.hb ENSGT00940000153251.a ENSGT00940000166938.d ENSGT00950000183163.b.n ENSGT01030000235646.a ENSGT00390000008256.vd.b.b ENSGT00390000008256.wd.a.b ENSGT00940000159370.e.a ENSGT00530000063174.a.k.c.b ENSGT00390000005330.g ENSGT00950000183121.b.b.b.b.w.e.b ##22 ENSGT00530000063666.b.eb.c ENSGT00940000159116.c ENSGT00550000074801.e ENSGT00940000161266.a.b ENSGT00940000175687.a ENSGT00510000046981.b.a.d ENSGT00390000011600.h ENSGT00390000000076.z.b ENSGT00500000045505.b.g ENSGT01100000263502.A.a.a.b.a.a ENSGT00940000160853.f ENSGT01030000234598.a.a.a.a.c ENSGT00990000205902.b.b ENSGT00990000205902.b.a ENSGT00940000155886.r Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00390000016814.a.d ENSGT00990000206793.a.a ENSGT01090000260281.b.b.b ENSGT00940000158089.b.f ENSGT00950000182997.b.l.b.b.a ENSGT00940000157755.r.e ENSGT00990000204208 ENSGT00940000163670.b.a.hb ENSGT00940000153251.a ENSGT00940000166938.d ENSGT00950000183163.b.n ENSGT00390000008256.wd.a.b ENSGT00940000159370.e.a ENSGT00530000063174.a.k.c.b ENSGT00390000005330.g ENSGT00950000183121.b.b.b.b.w.e.b ##22 ENSGT00530000063666.b.eb.c ENSGT00940000159116.c ENSGT00550000074801.e ENSGT00940000161266.a.b ENSGT00940000175687.a ENSGT00510000046981.b.a.d ENSGT00390000000076.z.b ENSGT00500000045505.b.g ENSGT01100000263502.A.a.a.b.a.a ENSGT00940000160853.f ENSGT01030000234598.a.a.a.a.c ENSGT00990000205902.b.b ENSGT00940000155886.r ENSGT00940000165845.c.a ENSGT00940000159661.l Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 21 ENSOTSG00005009445 rpl22l1 (ENSOTSG00005009458) ENSOTSG00005009461 tnika (ENSOTSG00005009472) tnfsf10 (ENSOTSG00005011606) msl2b (ENSOTSG00005011607) ENSOTSG00005011608 ENSOTSG00005011609 vipr2 (ENSOTSG00005011610) ENSOTSG00005011612 ENSOTSG00005011614 ENSOTSG00005011616 ENSOTSG00005011617 ENSOTSG00005011618 ENSOTSG00005011619 sat1b (ENSOTSG00005011622) ##22 ACOT9 (ENSOTSG00005011625) klhl15 (ENSOTSG00005011636) eif2s3 (ENSOTSG00005011637) apodb (ENSOTSG00005011638) ENSOTSG00005011639 and1 (ENSOTSG00005011640) ENSOTSG00005011641 ENSOTSG00005011642 ENSOTSG00005011645 ENSOTSG00005011647 ENSOTSG00005011649 ythdf3 (ENSOTSG00005011650) ENSOTSG00005011651 tagln3b (ENSOTSG00005011653) tagln3a (ENSOTSG00005011654) Chinook salmon MODERN SPECIES 2992 ENSOTSG00005045795 ENSOTSG00005045796 pwp2h (ENSOTSG00005045800) hikeshi (ENSOTSG00005045801) eed (ENSOTSG00005045802) ENSOTSG00005045804 ENSOTSG00005045805 sft2d2b (ENSOTSG00005045806) ENSOTSG00005045807 ENSOTSG00005045808 ENSOTSG00005045809 ENSOTSG00005045810 ENSOTSG00005045813 ENSOTSG00005039535 ENSOTSG00005039537 sat1b (ENSOTSG00005039542) ##22 ACOT9 (ENSOTSG00005039546) APOO (ENSOTSG00005040459) klhl15 (ENSOTSG00005040460) eif2s3 (ENSOTSG00005040462) ENSOTSG00005040463 ENSOTSG00005040467 apodb (ENSOTSG00005040470) ENSOTSG00005040472 and1 (ENSOTSG00005040474) ENSOTSG00005040475 ENSOTSG00005040476 ENSOTSG00005040477 ENSOTSG00005040478 ENSOTSG00005040480 ENSOTSG00005040481 Coho salmon MODERN SPECIES 2 ENSOKIG00005003705 ENSOKIG00005003688 ENSOKIG00005003522 ENSOKIG00005003454 ENSOKIG00005003441 ENSOKIG00005003437 ENSOKIG00005003405 ENSOKIG00005003381 cip2a (ENSOKIG00005003212) ENSOKIG00005003148 ENSOKIG00005003130 ENSOKIG00005003103 ENSOKIG00005002940 pdha1b (ENSOKIG00005002760) ACOT9 (ENSOKIG00005002720) SAT1 (ENSOKIG00005002682) ##22 apoob (ENSOKIG00005002661) KLHL15 (ENSOKIG00005002642) ENSOKIG00005002630 ENSOKIG00005002244 ENSOKIG00005002103 ENSOKIG00005002079 apodb (ENSOKIG00005002065) cops9 (ENSOKIG00005010335) and1 (ENSOKIG00005010301) ENSOKIG00005010287 TNK2 (ENSOKIG00005010208) tfr1b (ENSOKIG00005010144) ENSOKIG00005010104 ENSOKIG00005010068 ENSOKIG00005010055 Salmoninae ANCESTRAL SPECIES 157 ENSGT00940000155015.g.a ENSGT00940000156699.i ENSGT01070000253816.b.c.a ENSGT00390000016814.a.c ENSGT00990000206793.a.b.b ENSGT01090000260281.a ENSGT00940000158089.b.e ENSGT00950000182997.b.l.a ENSGT00940000157755.r.f ENSGT00940000159906.f.h ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159794 ENSGT00530000063174.a.k.d ENSGT00940000153430.a.a.i ENSGT00390000005330.h ENSGT00950000183121.b.b.b.b.w.f ##22 ENSGT00530000063666.b.eb.d ENSGT00940000159116.d ENSGT00550000074801.f ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266.b ENSGT00390000011600.h ENSGT00980000198875.g.a ENSGT00500000045505.b.h ENSGT00940000159828.b.a ENSGT01030000234826 ENSGT01030000234598.a.a.a.a.d ENSGT00990000205902.a ENSGT00940000159562 ENSGT00940000155886.q Salmoninae_a ANCESTRAL SPECIES 32 ENSGT00940000158089.b.e ENSGT00950000182997.b.l.a ENSGT00940000157755.r.f ENSGT00940000159906.f.h ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159794 ENSGT00940000155920.k.a ENSGT00940000166938.c ENSGT00950000183163.b.m ENSGT00390000008256.wd.a.a ENSGT01030000235646.a ENSGT00390000008256.vd.b.b ENSGT00940000159370.e.b ENSGT00530000063174.a.k.d ENSGT00390000005330.h ENSGT00950000183121.b.b.b.b.w.f ##22 ENSGT00530000063666.b.eb.d ENSGT00940000159116.d ENSGT00550000074801.f ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266.b ENSGT00500000045505.b.h ENSGT00940000159828.b.a ENSGT00940000160853.e ENSGT01030000234598.a.a.a.a.d ENSGT00990000205902.a ENSGT00940000159562 ENSGT00940000155886.q ENSGT00940000159661.k.b ENSGT00530000063679.A.l Oncorhynchus ANCESTRAL SPECIES 28 ENSGT00990000206793.a.b.b ENSGT01090000260281.a ENSGT00940000158089.b.e ENSGT00950000182997.b.l.a ENSGT00940000157755.r.f ENSGT00940000159906.f.h ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159794 ENSGT00940000155920.k.a ENSGT00940000166938.c ENSGT00950000183163.b.m ENSGT00390000008256.wd.a.a ENSGT00940000159370.e.b ENSGT00530000063174.a.k.d ENSGT00390000005330.h ENSGT00950000183121.b.b.b.b.w.f ##22 ENSGT00530000063666.b.eb.d ENSGT00940000159116.d ENSGT00550000074801.f ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000162716 ENSGT00940000175687.b ENSGT00990000210368 ENSGT00390000011600.g ENSGT00390000000076.z.a ENSGT00500000045505.b.h ENSGT00940000159828.b.a ENSGT00940000160853.e ENSGT01030000234598.a.a.a.a.d ENSGT00990000205902.a Oncorhynchus_a ANCESTRAL SPECIES 23 ENSGT00990000206793.a.b.b ENSGT01090000260281.a ENSGT00940000158089.b.e ENSGT00950000182997.b.l.a ENSGT00940000157755.r.f ENSGT00940000159906.f.h ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159794 ENSGT00940000155920.k.a ENSGT00940000166938.c ENSGT00950000183163.b.m ENSGT00390000008256.vd.b.b ENSGT00940000159370.e.b ENSGT00530000063174.a.k.d ENSGT00390000005330.h ENSGT00950000183121.b.b.b.b.w.f ##22 ENSGT00530000063666.b.eb.d ENSGT00940000159116.d ENSGT00550000074801.f ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000162716 ENSGT00940000175687.b ENSGT00990000210368 ENSGT00390000011600.g ENSGT00390000000076.z.a ENSGT00500000045505.b.h ENSGT00940000159828.b.a ENSGT00940000160853.e ENSGT01030000234598.a.a.a.a.d ENSGT00990000205902.a Chinook salmon MODERN SPECIES 7 ENSOTSG00005024888 ENSOTSG00005024887 vipr2 (ENSOTSG00005024886) ENSOTSG00005019130 ENSOTSG00005019079 GABRR3 (ENSOTSG00005019078) ENSOTSG00005019077 chrnd (ENSOTSG00005019075) ENSOTSG00005019074 ENSOTSG00005019072 ENSOTSG00005019068 ENSOTSG00005019067 RPS6KA3 (ENSOTSG00005019066) pdha1b (ENSOTSG00005016793) ACOT9 (ENSOTSG00005016271) sat1b (ENSOTSG00005016249) ##22 apoob (ENSOTSG00005016238) klhl15 (ENSOTSG00005016232) eif2s3 (ENSOTSG00005016226) ENSOTSG00005016225 ENSOTSG00005016222 ENSOTSG00005016220 otos (ENSOTSG00005016219) cops9 (ENSOTSG00005016218) and1 (ENSOTSG00005016217) adipoqa (ENSOTSG00005016197) ENSOTSG00005016185 tfr1b (ENSOTSG00005016184) ENSOTSG00005016181 MAP3K15 (ENSOTSG00005016178) ENSOTSG00005016175 Coho salmon MODERN SPECIES 9 ENSOKIG00005050060 ENSOKIG00005050062 ENSOKIG00005050148 ENSOKIG00005050289 ENSOKIG00005050304 ENSOKIG00005050314 ENSOKIG00005050316 chrnd (ENSOKIG00005050327) ENSOKIG00005050350 ENSOKIG00005050376 ENSOKIG00005050459 ENSOKIG00005050464 ENSOKIG00005050483 pdha1b (ENSOKIG00005050506) ACOT9 (ENSOKIG00005050519) SAT1 (ENSOKIG00005050527) ##22 apoob (ENSOKIG00005050531) klhl15 (ENSOKIG00005050539) eif2s3 (ENSOKIG00005050547) ENSOKIG00005050554 ENSOKIG00005050559 ENSOKIG00005014705 ENSOKIG00005014713 otos (ENSOKIG00005014736) cops9 (ENSOKIG00005014741) and1 (ENSOKIG00005014746) adipoqa (ENSOKIG00005014752) ENSOKIG00005014768 tfr1b (ENSOKIG00005014790) ENSOKIG00005014874 ENSOKIG00005014884 Rainbow trout MODERN SPECIES 2 ENSOMYG00000003921 ENSOMYG00000064129 ENSOMYG00000003822 ENSOMYG00000003772 ENSOMYG00000003147 ENSOMYG00000003625 ENSOMYG00000065848 ENSOMYG00000003551 ENSOMYG00000003440 ENSOMYG00000065908 ENSOMYG00000003253 ENSOMYG00000064201 RPS6KA3 (ENSOMYG00000069271) ENSOMYG00000040609 ACOT9 (ENSOMYG00000040549) SAT1 (ENSOMYG00000040494) ##22 apoob (ENSOMYG00000040468) KLHL15 (ENSOMYG00000040457) ENSOMYG00000040430 ENSOMYG00000040401 ENSOMYG00000040380 ENSOMYG00000040369 ENSOMYG00000040343 otos (ENSOMYG00000064635) cops9 (ENSOMYG00000040301) and1 (ENSOMYG00000040291) adipoqa (ENSOMYG00000065861) ENSOMYG00000062378 tfr1b (ENSOMYG00000040258) ENSOMYG00000066887 ccl20b (ENSOMYG00000040252) Salmo ANCESTRAL SPECIES 3 ENSGT00940000157755.r.f ENSGT00940000159906.f.g.a ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159794 ENSGT00940000155920.k.a ENSGT00940000166938.c ENSGT00950000183163.b.m ENSGT00950000182941.b.b.b.b ENSGT00390000008256.wd.a.b ENSGT00940000159370.e.a ENSGT00530000063174.a.k.c.a.a ENSGT00390000008256.vd.b.b ENSGT00940000159370.e.b ENSGT00530000063174.a.k.d ENSGT00390000005330.h ENSGT00950000183121.b.b.b.b.w.f ##22 ENSGT00530000063666.b.eb.d ENSGT00940000159116.d ENSGT00550000074801.f ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266.b ENSGT00940000175687.b ENSGT00990000210368 ENSGT00390000011600.g ENSGT00390000000076 ENSGT00500000045505.b.h ENSGT00940000159828.b.a ENSGT00940000160853.e ENSGT01030000234598.a.a.a.a.d ENSGT00990000205902.a River trout MODERN SPECIES 11 msl2b (ENSSTUG00000028480) ENSSTUG00000028471 ENSSTUG00000028456 vipr2 (ENSSTUG00000028447) ENSSTUG00000028392 ENSSTUG00000028368 ENSSTUG00000028359 chrnd (ENSSTUG00000027414) ENSSTUG00000027390 ENSSTUG00000027322 ENSSTUG00000027276 EIF1AX (ENSSTUG00000027208) RPS6KA3 (ENSSTUG00000026945) pdha1b (ENSSTUG00000026879) ACOT9 (ENSSTUG00000026585) sat1b (ENSSTUG00000026547) ##22 apoob (ENSSTUG00000026467) klhl15 (ENSSTUG00000026390) eif2s3 (ENSSTUG00000026335) ENSSTUG00000026294 ENSSTUG00000016133 ENSSTUG00000016124 ENSSTUG00000016112 ENSSTUG00000016103 ENSSTUG00000016084 otos (ENSSTUG00000016077) cops9 (ENSSTUG00000016062) and1 (ENSSTUG00000016052) adipoqa (ENSSTUG00000016043) TNK2 (ENSSTUG00000016035) tfr1b (ENSSTUG00000015992) Atlantic salmon MODERN SPECIES 10 ENSSSAG00000108490 ENSSSAG00000107371 ENSSSAG00000078463 ENSSSAG00000082411 ENSSSAG00000078490 ENSSSAG00000109282 ENSSSAG00000078773 ENSSSAG00000078800 MAP7D2 (ENSSSAG00000118996) ENSSSAG00000082016 EIF1AX (ENSSSAG00000078822) ENSSSAG00000098060 RPS6KA3 (ENSSSAG00000078964) ENSSSAG00000076899 ACOT9 (ENSSSAG00000078036) SAT1 (ENSSSAG00000080231) ##22 ENSSSAG00000080233 KLHL15 (ENSSSAG00000080245) ENSSSAG00000084918 if2g (ENSSSAG00000080260) ENSSSAG00000080279 ENSSSAG00000080282 ENSSSAG00000080284 ENSSSAG00000108841 ENSSSAG00000112922 ENSSSAG00000116263 otos (ENSSSAG00000114510) cops9 (ENSSSAG00000080290) and1 (ENSSSAG00000080293) adipoqa (ENSSSAG00000121226) ENSSSAG00000097416 Huchen MODERN SPECIES 2053 pdha1b (ENSHHUG00000001518) ENSHHUG00000001827 ACOT9 (ENSHHUG00000001897) sat1b (ENSHHUG00000001955) ##22 apoob (ENSHHUG00000001975) klhl15 (ENSHHUG00000002049) eif2s3 (ENSHHUG00000002083) ENSHHUG00000002147 ENSHHUG00000002156 ENSHHUG00000002175 ENSHHUG00000002192 ENSHHUG00000002205 ENSHHUG00000002213 otos (ENSHHUG00000002312) ENSHHUG00000002334 and1 (ENSHHUG00000002348) adipoqa (ENSHHUG00000002356) ENSHHUG00000002375 ENSHHUG00000002383 Northern pike MODERN SPECIES 20 ENSELUG00000011899 ENSELUG00000028463 GABRR3 (ENSELUG00000012038) ENSELUG00000012065 ENSELUG00000028231 ENSELUG00000034588 chrnd (ENSELUG00000012182) cip2a (ENSELUG00000012252) si:ch73-264p11.1 (ENSELUG00000026366) ENSELUG00000012285 ENSELUG00000012313 EIF1AX (ENSELUG00000012432) RPS6KA3 (ENSELUG00000012539) pdha1b (ENSELUG00000012632) acot9.2 (ENSELUG00000012671) sat1b (ENSELUG00000012698) ##22 apoob (ENSELUG00000012820) klhl15 (ENSELUG00000012872) eif2s3 (ENSELUG00000012926) ENSELUG00000012983 ENSELUG00000012949 ENSELUG00000033979 apodb (ENSELUG00000013046) otos (ENSELUG00000013059) cops9 (ENSELUG00000013075) and1 (ENSELUG00000013102) ENSELUG00000013115 TNK2 (ENSELUG00000013145) tfr1b (ENSELUG00000013175) ENSELUG00000013185 MAP3K15 (ENSELUG00000013343) Acanthomorphata ANCESTRAL SPECIES 144 ENSGT00940000163670.b.a ENSGT01070000255370 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000171984 ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000167146 ENSGT00940000172693 Euacanthomorphacea ANCESTRAL SPECIES 16 ENSGT00940000159906.f ENSGT00940000163670.a ENSGT00940000163670.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000171984 ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000167146 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z Percomorphaceae ANCESTRAL SPECIES 67 ENSGT00940000159906.f ENSGT00940000163670.a ENSGT00940000163670.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000171984 ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000167146 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z Tiger tail seahorse MODERN SPECIES 77 cldn11b (ENSHCOG00000015001) ENSHCOG00000015029 rpl22l1 (ENSHCOG00000015049) ENSHCOG00000015066 TNIK (ENSHCOG00000015118) ENSHCOG00000015159 acot9.2 (ENSHCOG00000015275) sat1b (ENSHCOG00000000423) ##22 ENSHCOG00000015308 klhl15 (ENSHCOG00000015329) eif2s3 (ENSHCOG00000015356) ENSHCOG00000015431 slc4a2b (ENSHCOG00000015481) ENSHCOG00000015493 ENSHCOG00000015499 nrbp2b (ENSHCOG00000015532) puf60b (ENSHCOG00000015541) scrib (ENSHCOG00000015612) cdv3 (ENSHCOG00000015632) hacd1 (ENSHCOG00000015665) TMEM236 (ENSHCOG00000015675) MRC1 (ENSHCOG00000015686) ENSHCOG00000015699 Percomorphaceae_B ANCESTRAL SPECIES 20 ENSGT00940000163670.a ENSGT00940000163670.b.a ENSGT01030000234893 ENSGT00940000162944 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000167146 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z Ovalentaria ANCESTRAL SPECIES 21 ENSGT00940000163670.a ENSGT00940000163670.b.a ENSGT01020000230622 ENSGT00940000162944 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00940000163015 ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000162952.d.b.a Atherinomorphae ANCESTRAL SPECIES 19 ENSGT00940000157755.r ENSGT00940000159906.f ENSGT00940000163670.a ENSGT00940000163670.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000171984 ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT01030000235646 ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00940000163015 ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 Cyprinodontiformes ANCESTRAL SPECIES 36 ENSGT01030000234893.b ENSGT00940000163670.b.a.q.a.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000171984 ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000182941.b.b.b.b ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00940000163015 ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 Aplocheiloidei ANCESTRAL SPECIES 125 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a ENSGT00960000187826 ENSGT00940000177048 Mangrove rivulus MODERN SPECIES 458 APOO (ENSKMAG00000017171) sat1b (ENSKMAG00000017187) ##22 klhl15 (ENSKMAG00000017222) eif2s3 (ENSKMAG00000017296) ENSKMAG00000017336 ENSKMAG00000017359 ENSKMAG00000017390 PLD1 (ENSKMAG00000017403) TNIK (ENSKMAG00000017444) ENSKMAG00000017495 rpl22l1 (ENSKMAG00000017514) ENSKMAG00000017574 cldn11b (ENSKMAG00000017676) ENSKMAG00000017692 cul1a (ENSKMAG00000017726) ezh2 (ENSKMAG00000017786) ENSKMAG00000017847 Turquoise killifish MODERN SPECIES 1617 ENSNFUG00015020026 vipr2 (ENSNFUG00015020031) ENSNFUG00015020152 ENSNFUG00015021665 ENSNFUG00015021667 ENSNFUG00015021671 ENSNFUG00015021682 rps6ka3b (ENSNFUG00015021708) EIF1AXB (ENSNFUG00015022210) pdha1b (ENSNFUG00015022255) ACOT9 (ENSNFUG00015022286) ENSNFUG00015022301 ENSNFUG00015022320 ENSNFUG00015022327 ENSNFUG00015022335 SATL1 (ENSNFUG00015022339) ##22 APOO (ENSNFUG00015022353) KLHL15 (ENSNFUG00015022361) EIF2S3 (ENSNFUG00015022366) ENSNFUG00015022379 ENSNFUG00015022383 ENSNFUG00015022386 PLD1 (ENSNFUG00015022401) ENSNFUG00015023094 ENSNFUG00015023353 rpl22l1 (ENSNFUG00015023357) ENSNFUG00015023363 cldn11b (ENSNFUG00015023365) ENSNFUG00015023366 ENSNFUG00015023370 CUL1B (ENSNFUG00015009059) Cyprinodontoidei ANCESTRAL SPECIES 48 ENSGT01030000234893.b.a.a ENSGT00940000163670.b.a.q.a.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000171984 ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000182941.b.b.b.b ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00940000163015 ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 Poeciliinae ANCESTRAL SPECIES 33 ENSGT01050000244843.c.a.a.a.b.b.a.a.b.a ENSGT00940000154641.C.b.h.g.a ENSGT00940000159794 ENSGT00940000155244.c.c.b.b ENSGT00940000155244.c.c.b.a ENSGT00940000153251.a ENSGT00940000171984.f ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00940000163015 ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000162952.d.b.a Poecilia ANCESTRAL SPECIES 70 ENSGT00940000154641.C.b.h.g.a ENSGT01030000234893.b.b ENSGT00940000158239.a.b ENSGT00940000159794 ENSGT00940000155244.c.c.b.b ENSGT00940000155244.c.c.b.a ENSGT00940000153251.a ENSGT00940000171984.f ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00940000163015 ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.a.b ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a ENSGT00940000177048 NAME_6 ANCESTRAL SPECIES 193 ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00940000163015 ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.a.b ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z Sailfin molly MODERN SPECIES 2477 acot9.2 (ENSPLAG00000008344) sat1b (ENSPLAG00000008372) ##22 apoob (ENSPLAG00000008382) klhl15 (ENSPLAG00000008411) eif2s3 (ENSPLAG00000008465) ENSPLAG00000008498 ENSPLAG00000008522 ENSPLAG00000008528 Amazon molly MODERN SPECIES 850 ENSPFOG00000010048 acot9.2 (ENSPFOG00000009814) sat1b (ENSPFOG00000009808) ##22 apoob (ENSPFOG00000009802) klhl15 (ENSPFOG00000009668) eif2s3 (ENSPFOG00000009544) ENSPFOG00000009396 ENSPFOG00000009245 ENSPFOG00000009163 ENSPFOG00000008963 ENSPFOG00000008774 ENSPFOG00000008700 rpl22l1 (ENSPFOG00000023086) ENSPFOG00000008689 Guppy MODERN SPECIES 451 ENSPREG00000011607 ENSPREG00000011594 ENSPREG00000011584 chrnd (ENSPREG00000011542) ENSPREG00000011514 cip2a (ENSPREG00000011485) ENSPREG00000011470 ENSPREG00000011459 ENSPREG00000011428 ENSPREG00000011406 eif1axa (ENSPREG00000011381) rps6ka3b (ENSPREG00000011354) ENSPREG00000011343 pdha1b (ENSPREG00000011312) acot9.2 (ENSPREG00000011268) sat1b (ENSPREG00000011242) ##22 apoob (ENSPREG00000011228) klhl15 (ENSPREG00000011196) eif2s3 (ENSPREG00000011148) ENSPREG00000011127 ENSPREG00000011102 ENSPREG00000011082 ENSPREG00000011035 ENSPREG00000010976 ENSPREG00000010957 ENSPREG00000010946 rpl22l1 (ENSPREG00000010924) ENSPREG00000010921 ENSPREG00000010910 cldn11b (ENSPREG00000010894) ENSPREG00000010863 Platyfish MODERN SPECIES 13 chrnd (ENSXMAG00000022574) ENSXMAG00000026348 cip2a (ENSXMAG00000022014) si:ch73-264p11.1 (ENSXMAG00000010256) ENSXMAG00000010252 ENSXMAG00000010235 ENSXMAG00000010229 eif1axb (ENSXMAG00000021594) rps6ka3b (ENSXMAG00000023369) ENSXMAG00000023950 ENSXMAG00000023723 ENSXMAG00000022340 ENSXMAG00000024066 pdha1b (ENSXMAG00000011748) acot9.2 (ENSXMAG00000011796) sat1b (ENSXMAG00000011825) ##22 apoob (ENSXMAG00000011828) klhl15 (ENSXMAG00000023286) eif2s3 (ENSXMAG00000011878) ENSXMAG00000011895 ENSXMAG00000025874 ENSXMAG00000027353 PLD1 (ENSXMAG00000011913) tnika (ENSXMAG00000021927) ENSXMAG00000023682 rpl22l1 (ENSXMAG00000012049) ENSXMAG00000026098 ENSXMAG00000012058 cldn11b (ENSXMAG00000021629) ENSXMAG00000027755 ENSXMAG00000028132 NAME_4 ANCESTRAL SPECIES 181 ENSGT00950000182941.b.b.b.b ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801.d ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 ENSGT00940000154774 Mummichog MODERN SPECIES 424 ENSFHEG00000006117 eif1axb (ENSFHEG00000006145) ENSFHEG00000006180 rps6ka3b (ENSFHEG00000006236) pdha1b (ENSFHEG00000006301) acot9.2 (ENSFHEG00000006439) sat1b (ENSFHEG00000006333) ##22 apoob (ENSFHEG00000006467) klhl15 (ENSFHEG00000006527) eif2s3 (ENSFHEG00000006575) ENSFHEG00000000176 ENSFHEG00000006585 ENSFHEG00000006624 PLD1 (ENSFHEG00000006649) TNIK (ENSFHEG00000006806) ENSFHEG00000006842 rpl22l1 (ENSFHEG00000006859) ENSFHEG00000006878 cldn11b (ENSFHEG00000006881) ENSFHEG00000006896 Sheepshead minnow MODERN SPECIES 153 ENSCVAG00000016468 ENSCVAG00000016438 eif1axa (ENSCVAG00000016422) rps6ka3b (ENSCVAG00000016379) pdha1b (ENSCVAG00000016266) acot9.2 (ENSCVAG00000016180) sat1b (ENSCVAG00000016096) ##22 apoob (ENSCVAG00000016067) klhl15 (ENSCVAG00000016060) eif2s3 (ENSCVAG00000016029) ENSCVAG00000015983 ENSCVAG00000015934 ENSCVAG00000015869 PLD1 (ENSCVAG00000015855) TNIK (ENSCVAG00000015809) ENSCVAG00000015500 rpl22l1 (ENSCVAG00000015479) anapc5 (ENSCVAG00000015468) ENSCVAG00000015401 LRRTM4 (ENSCVAG00000015393) ENSCVAG00000015386 vsig8b (ENSCVAG00000015358) Oryzias ANCESTRAL SPECIES 18 ENSGT00940000158089.b ENSGT00950000182997.b ENSGT00940000157755.r ENSGT00940000159906.f ENSGT00940000163670.a ENSGT01030000235460 ENSGT00940000159794 ENSGT01030000235646 ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a ENSGT00940000177048 ENSGT00940000154774 Oryzias_a ANCESTRAL SPECIES 82 ENSGT00940000158089.b ENSGT00950000182997.b ENSGT00940000157755.r ENSGT00940000159906.f ENSGT00940000163670.a ENSGT01030000235460 ENSGT00940000159794 ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 ENSGT00940000154774 Japanese Medaka HdrR MODERN SPECIES 12 ENSORLG00000030174 ENSORLG00000024603 ENSORLG00000022921 ENSORLG00000022594 ENSORLG00000002349 ENSORLG00000027020 ENSORLG00000002403 ENSORLG00000019029 ENSORLG00000023761 ENSORLG00000024488 chrnd (ENSORLG00000026994) eif1axb (ENSORLG00000002444) rps6ka3b (ENSORLG00000002556) pdha1b (ENSORLG00000002588) acot9.2 (ENSORLG00000002637) sat1b (ENSORLG00000002664) ##22 ENSORLG00000027078 ENSORLG00000002683 ENSORLG00000027784 APOO (ENSORLG00000002692) klhl15 (ENSORLG00000018526) eif2s3 (ENSORLG00000002716) ENSORLG00000002722 ENSORLG00000002741 ENSORLG00000024083 PLD1 (ENSORLG00000002792) TNIK (ENSORLG00000002885) ENSORLG00000027121 rpl22l1 (ENSORLG00000002916) ENSORLG00000002934 cldn11b (ENSORLG00000002943) Chinese medaka MODERN SPECIES 2595 sat1b (ENSOSIG00000003226) ##22 Oryzias_b ANCESTRAL SPECIES 16 ENSGT00940000159794 ENSGT00940000165646.B ENSGT00940000167175.b.a ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000167146 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a ENSGT00940000177048 ENSGT00940000154774 Indian medaka MODERN SPECIES 23 ENSOMEG00000018309 ENSOMEG00000018314 pink1 (ENSOMEG00000018348) ENSOMEG00000018370 agmat (ENSOMEG00000018397) HSPG2 (ENSOMEG00000018627) tmem269 (ENSOMEG00000018680) MAGI3 (ENSOMEG00000018795) RSBN1 (ENSOMEG00000018827) chrnd (ENSOMEG00000018863) ENSOMEG00000018949 ENSOMEG00000018980 rps6ka3b (ENSOMEG00000019141) pdha1b (ENSOMEG00000019268) acot9.2 (ENSOMEG00000019355) sat1b (ENSOMEG00000019425) ##22 apoob (ENSOMEG00000019455) klhl15 (ENSOMEG00000019521) eif2s3 (ENSOMEG00000019582) ENSOMEG00000019633 ENSOMEG00000019644 arcn1b (ENSOMEG00000000523) hmgb2b (ENSOMEG00000019748) ENSOMEG00000019764 ENSOMEG00000019773 ENSOMEG00000019792 ENSOMEG00000019804 ENSOMEG00000019918 ENSOMEG00000019943 ATP1B2 (ENSOMEG00000019993) ENSOMEG00000020013 Javanese ricefish MODERN SPECIES 12 ENSOJAG00000022643 vipr2 (ENSOJAG00000022609) ENSOJAG00000020242 ENSOJAG00000020039 ENSOJAG00000019967 ENSOJAG00000019955 ENSOJAG00000019945 ENSOJAG00000019924 ENSOJAG00000019913 ENSOJAG00000019907 eif1axb (ENSOJAG00000019878) rps6ka3b (ENSOJAG00000019490) pdha1b (ENSOJAG00000019101) acot9.2 (ENSOJAG00000019022) ENSOJAG00000018990 sat1b (ENSOJAG00000018975) ##22 ENSOJAG00000018928 klhl15 (ENSOJAG00000018890) eif2s3 (ENSOJAG00000018554) ENSOJAG00000018484 ENSOJAG00000018452 PLD1 (ENSOJAG00000017535) ENSOJAG00000015496 rpl22l1 (ENSOJAG00000015425) ENSOJAG00000015402 cldn11b (ENSOJAG00000015394) ENSOJAG00000015373 ENSOJAG00000015366 cul1a (ENSOJAG00000015314) ezh2 (ENSOJAG00000015177) cip2a (ENSOJAG00000015085) Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT00940000163670.a ENSGT00940000162944 ENSGT01020000230622 ENSGT00940000163670.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00940000163015 ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 Cichlidae ANCESTRAL SPECIES 79 ENSGT00940000163670.b.a.m ENSGT01050000244843.c.a.a.a.a.a ENSGT00940000163670.b.a.n.a.b.b ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000162716 ENSGT00940000161266 ENSGT00940000155015.g.a Pseudocrenilabrinae ANCESTRAL SPECIES 52 ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293.c ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 67 ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293.c ENSGT00940000156456 ENSGT00940000162716 ENSGT00730000111293.d ENSGT00940000161266 ENSGT00940000155015.g.a Haplochromini ANCESTRAL SPECIES 77 ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293.c ENSGT00940000156456 ENSGT00940000162716 ENSGT00940000172693 ENSGT00940000155015.g.a Burton s mouthbrooder MODERN SPECIES 727 chrnd (ENSHBUG00000012293) cip2a (ENSHBUG00000012253) ENSHBUG00000011986 ENSHBUG00000011983 ENSHBUG00000011971 eif1axb (ENSHBUG00000011962) rps6ka3b (ENSHBUG00000011916) ENSHBUG00000011863 acot9.2 (ENSHBUG00000011854) sat1b (ENSHBUG00000011831) ##22 ENSHBUG00000011808 eif2s3 (ENSHBUG00000011793) klhl15 (ENSHBUG00000000322) ENSHBUG00000011717 ENSHBUG00000011711 ENSHBUG00000011699 ENSHBUG00000011662 ENSHBUG00000011641 Haplochromini_A ANCESTRAL SPECIES 81 ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293.c ENSGT00940000156456 ENSGT00940000162716 ENSGT00940000155015.g.a ENSGT01050000244843.c.a.a.a.a.a ENSGT01070000253760.b.a.a.a.a.b.a.a ENSGT00940000163670.b.a.n.a.a.b P. nyererei MODERN SPECIES 655 ENSPNYG00000024264 chrnd (ENSPNYG00000024265) ENSPNYG00000024266 ENSPNYG00000024267 ENSPNYG00000024268 zgc:112982 (ENSPNYG00000024269) eif1axb (ENSPNYG00000024270) ENSPNYG00000024271 rps6ka3b (ENSPNYG00000024272) ENSPNYG00000024273 acot9.2 (ENSPNYG00000000825) sat1b (ENSPNYG00000000840) ##22 apoob (ENSPNYG00000000880) klhl15 (ENSPNYG00000001030) eif2s3 (ENSPNYG00000001094) ENSPNYG00000001135 ENSPNYG00000001175 ENSPNYG00000001223 Haplochromini_B ANCESTRAL SPECIES 90 ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293.c ENSGT00940000156456 ENSGT00940000162716 ENSGT00940000155015.g.a ENSGT01050000244843.c.a.a.a.a.a ENSGT01070000253760.b.a.a.a.a.b.a.a ENSGT00940000163670.b.a.n.a.a.b ENSGT01050000244843.c.a.a.a.a.b.b ENSGT00940000163670.b.a.n.a.a.a.a.b.a ENSGT00940000163670.b.a.n.a.a.a.a.a ENSGT00940000163670.b.a.n.a.a.a.b.a.a ENSGT00940000163670.b.a.n.a.a.a.b.b Zebra mbuna MODERN SPECIES 1112 ENSMZEG00005020568 ENSMZEG00005020571 ENSMZEG00005020574 ENSMZEG00005020578 chrnd (ENSMZEG00005020586) cip2a (ENSMZEG00005020597) si:ch73-264p11.1 (ENSMZEG00005020606) ENSMZEG00005020610 ENSMZEG00005020613 MAP7D2 (ENSMZEG00005020617) eif1axb (ENSMZEG00005020621) ENSMZEG00005020627 rps6ka3b (ENSMZEG00005020643) pdha1b (ENSMZEG00005020652) acot9.2 (ENSMZEG00005020672) sat1b (ENSMZEG00005020683) ##22 apoob (ENSMZEG00005020685) klhl15 (ENSMZEG00005020694) eif2s3 (ENSMZEG00005020717) ENSMZEG00005020725 ENSMZEG00005020731 ENSMZEG00005020736 ENSMZEG00005020745 ENSMZEG00005020748 ENSMZEG00005020757 ENSMZEG00005020759 scn5lab (ENSMZEG00005020832) ENSMZEG00005022878 ENSMZEG00005022880 ENSMZEG00005022884 ENSMZEG00005022886 Eastern happy MODERN SPECIES 21 ENSACLG00000015798 ENSACLG00000015781 ENSACLG00000015763 ENSACLG00000015735 chrnd (ENSACLG00000015676) cip2a (ENSACLG00000015575) si:ch73-264p11.1 (ENSACLG00000015564) ENSACLG00000015542 ENSACLG00000015521 rps6ka3b (ENSACLG00000015458) eif1axb (ENSACLG00000015402) ENSACLG00000015383 rps6ka3b (ENSACLG00000015200) pdha1b (ENSACLG00000015121) acot9.2 (ENSACLG00000015069) sat1b (ENSACLG00000015045) ##22 apoob (ENSACLG00000015002) klhl15 (ENSACLG00000014951) eif2s3 (ENSACLG00000014869) ENSACLG00000014820 ENSACLG00000014787 ENSACLG00000014780 ENSACLG00000014729 ENSACLG00000014706 ENSACLG00000014636 ENSACLG00000014600 ENSACLG00000014570 ENSACLG00000014552 ENSACLG00000014542 ENSACLG00000014534 ENSACLG00000014421 Lyretail cichlid MODERN SPECIES 497 ENSNBRG00000008164 cip2a (ENSNBRG00000008195) si:ch73-264p11.1 (ENSNBRG00000008252) ENSNBRG00000008271 ENSNBRG00000008311 eif1axb (ENSNBRG00000008321) ENSNBRG00000008410 rps6ka3b (ENSNBRG00000008589) ENSNBRG00000008630 pdha1b (ENSNBRG00000008654) ACOT9 (ENSNBRG00000008713) ENSNBRG00000008732 sat1b (ENSNBRG00000008755) ##22 apoob (ENSNBRG00000008780) klhl15 (ENSNBRG00000008874) eif2s3 (ENSNBRG00000008945) ENSNBRG00000008983 ENSNBRG00000009014 ENSNBRG00000009144 ENSNBRG00000009249 ENSNBRG00000009269 ENSNBRG00000009279 Nile tilapia MODERN SPECIES 21 ENSONIG00000031140 ENSONIG00000008274 chrnd (ENSONIG00000008195) cip2a (ENSONIG00000008200) ENSONIG00000041226 ENSONIG00000041543 zgc:112408 (ENSONIG00000008203) ENSONIG00000035557 ENSONIG00000008205 ENSONIG00000039125 eif1axb (ENSONIG00000008209) ENSONIG00000008211 rps6ka3b (ENSONIG00000008212) pdha1b (ENSONIG00000008220) acot9.2 (ENSONIG00000008224) sat1b (ENSONIG00000008231) ##22 apoob (ENSONIG00000008234) klhl15 (ENSONIG00000008235) eif2s3 (ENSONIG00000008238) ENSONIG00000008244 ENSONIG00000008245 ENSONIG00000008253 ENSONIG00000008255 ENSONIG00000031655 ENSONIG00000042484 ENSONIG00000030531 ENSONIG00000041971 ENSONIG00000032379 ENSONIG00000038190 ENSONIG00000027630 ENSONIG00000032529 Midas cichlid MODERN SPECIES 243 ENSACIG00000008679 ENSACIG00000008692 ENSACIG00000008703 cip2a (ENSACIG00000008726) si:ch73-264p11.1 (ENSACIG00000008933) zgc:112408 (ENSACIG00000008945) ENSACIG00000009042 zgc:112982 (ENSACIG00000009107) eif1axa (ENSACIG00000009147) ENSACIG00000009172 rps6ka3b (ENSACIG00000009187) pdha1b (ENSACIG00000009242) acot9.2 (ENSACIG00000009312) sat1b (ENSACIG00000009518) ##22 apoob (ENSACIG00000009540) klhl15 (ENSACIG00000009569) eif2s3 (ENSACIG00000009600) ENSACIG00000009634 ENSACIG00000009663 ENSACIG00000009682 ENSACIG00000009810 ENSACIG00000009862 ENSACIG00000009868 ENSACIG00000009925 ENSACIG00000009945 Pomacentridae ANCESTRAL SPECIES 80 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330.k ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000162952.d.b.a ENSGT00940000177048 Pomacentridae_A ANCESTRAL SPECIES 114 ENSGT01050000244843.c.a.a.a.a.a ENSGT00940000163670.b.a.k.a.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330.k ENSGT00390000005330.l ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000162952.d.b.a ENSGT00940000177048 Amphiprion ANCESTRAL SPECIES 145 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330.k ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000162716 ENSGT00940000167146 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 Clown anemonefish MODERN SPECIES 3053 sat1b (ENSAOCG00000018744) ##22 APOO (ENSAOCG00000018721) klhl15 (ENSAOCG00000018689) eif2s3 (ENSAOCG00000018632) Orange clownfish MODERN SPECIES 14 ENSAPEG00000005972 ENSAPEG00000005948 ENSAPEG00000005941 ENSAPEG00000005905 chrnd (ENSAPEG00000005864) cip2a (ENSAPEG00000005607) ENSAPEG00000005552 zgc:112408 (ENSAPEG00000005537) ENSAPEG00000005437 ENSAPEG00000005388 eif1axb (ENSAPEG00000005361) rps6ka3b (ENSAPEG00000005334) pdha1b (ENSAPEG00000005170) acot9.2 (ENSAPEG00000005026) ercc4 (ENSAPEG00000004992) sat1b (ENSAPEG00000004956) ##22 apoob (ENSAPEG00000004940) klhl15 (ENSAPEG00000004899) eif2s3 (ENSAPEG00000004840) ENSAPEG00000004810 ENSAPEG00000004761 ENSAPEG00000004692 PLD1 (ENSAPEG00000004358) TNIK (ENSAPEG00000004265) ENSAPEG00000004194 rpl22l1 (ENSAPEG00000004158) ENSAPEG00000004137 cldn11b (ENSAPEG00000004102) ENSAPEG00000004071 ENSAPEG00000004053 cul1a (ENSAPEG00000003986) Spiny chromis MODERN SPECIES 2452 pdha1b (ENSAPOG00000021974) acot9.2 (ENSAPOG00000022003) ENSAPOG00000022024 sat1b (ENSAPOG00000022051) ##22 Bicolor damselfish MODERN SPECIES 379 ENSSPAG00000018155 ENSSPAG00000018148 ENSSPAG00000018108 ENSSPAG00000018087 ENSSPAG00000018072 chrnd (ENSSPAG00000018044) cip2a (ENSSPAG00000017905) ENSSPAG00000017877 zgc:112408 (ENSSPAG00000017869) ENSSPAG00000017805 ENSSPAG00000017763 eif1axb (ENSSPAG00000017728) rps6ka3b (ENSSPAG00000017578) pdha1b (ENSSPAG00000017523) acot9.2 (ENSSPAG00000017464) sat1b (ENSSPAG00000017441) ##22 apoob (ENSSPAG00000017433) klhl15 (ENSSPAG00000017346) eif2s3 (ENSSPAG00000017292) ENSSPAG00000017266 ENSSPAG00000017232 ENSSPAG00000017210 ENSSPAG00000017182 PLD1 (ENSSPAG00000017147) TNIK (ENSSPAG00000016970) ENSSPAG00000016936 rpl22l1 (ENSSPAG00000016926) ENSSPAG00000016908 cldn11b (ENSSPAG00000016900) Percomorphaceae_C ANCESTRAL SPECIES 21 ENSGT00940000163670.b.a ENSGT01030000234893 ENSGT01020000230622 ENSGT00940000162944 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000167146 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z Percomorphaceae_D ANCESTRAL SPECIES 21 ENSGT00990000204208 ENSGT00940000163670.b.a ENSGT01030000234893 ENSGT01020000230622 ENSGT00940000162944 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT01030000235646 ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00390000013820 Anabantaria ANCESTRAL SPECIES 22 ENSGT00940000159906.f ENSGT00990000204208 ENSGT00940000163670.a ENSGT00940000163670.b.a ENSGT00940000162944 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT01030000235646 ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a ENSGT00960000187826 ENSGT00940000177048 Zig-zag eel DUPLICATION Zig-zag eel MODERN SPECIES 84 ENSMAMG00000027562 ENSMAMG00000007995 ENSMAMG00000026304 ENSMAMG00000027419 ENSMAMG00000008024 ENSMAMG00000008050 ENSMAMG00000027653 ENSMAMG00000008116 ENSMAMG00000008156 ENSMAMG00000008162 ENSMAMG00000008191 ENSMAMG00000008210 rps6ka3b (ENSMAMG00000008244) pdha1b (ENSMAMG00000008314) ENSMAMG00000008372 ENSMAMG00000026991 ##22 ENSMAMG00000008409 ENSMAMG00000008465 ENSMAMG00000028670 ENSMAMG00000008523 ENSMAMG00000027758 ENSMAMG00000024458 cldn11b (ENSMAMG00000008567) ENSMAMG00000008571 rpl22l1 (ENSMAMG00000027001) ENSMAMG00000025758 TNIK (ENSMAMG00000008652) PLD1 (ENSMAMG00000008804) ENSMAMG00000024768 ENSMAMG00000008864 ENSMAMG00000026947 Zig-zag eel MODERN SPECIES 84 ENSMAMG00000027758 ENSMAMG00000024458 cldn11b (ENSMAMG00000008567) ENSMAMG00000008571 rpl22l1 (ENSMAMG00000027001) ENSMAMG00000025758 TNIK (ENSMAMG00000008652) PLD1 (ENSMAMG00000008804) ENSMAMG00000024768 ENSMAMG00000008864 ENSMAMG00000026947 EIF2S3 (ENSMAMG00000008913) ENSMAMG00000008941 KLHL15 (ENSMAMG00000008988) APOO (ENSMAMG00000009056) ENSMAMG00000009064 ##22 Anabantoidei ANCESTRAL SPECIES 20 ENSGT00940000157755.r ENSGT00940000159906.f ENSGT00990000204208 ENSGT00940000162944 ENSGT00940000163670.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT01030000235646 ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00390000013820 ENSGT00940000162952.d.b.a Siamese fighting fish MODERN SPECIES 15 vipr2 (ENSBSLG00000002174) ENSBSLG00000001327 ENSBSLG00000001273 ENSBSLG00000001229 ENSBSLG00000001196 ENSBSLG00000000905 ENSBSLG00000000902 chrnd (ENSBSLG00000000807) cip2a (ENSBSLG00000000647) si:ch73-264p11.1 (ENSBSLG00000000573) ENSBSLG00000000545 eif1axa (ENSBSLG00000000507) rps6ka3b (ENSBSLG00000024096) pdha1b (ENSBSLG00000023974) acot9.2 (ENSBSLG00000023878) sat1b (ENSBSLG00000023650) ##22 apoob (ENSBSLG00000023588) klhl15 (ENSBSLG00000023568) eif2s3 (ENSBSLG00000023435) ENSBSLG00000023432 ENSBSLG00000023430 ENSBSLG00000023425 ENSBSLG00000023424 PLD1 (ENSBSLG00000023303) TNIK (ENSBSLG00000022922) ENSBSLG00000022874 rpl22l1 (ENSBSLG00000022834) cldn11b (ENSBSLG00000022802) ENSBSLG00000022762 ENSBSLG00000022763 ENSBSLG00000022758 Climbing perch MODERN SPECIES 11 ENSATEG00000020928 ENSATEG00000020949 ENSATEG00000020895 ENSATEG00000025347 ENSATEG00000020914 ENSATEG00000020988 cip2a (ENSATEG00000021007) si:ch73-264p11.1 (ENSATEG00000027625) ENSATEG00000021034 ENSATEG00000021059 ENSATEG00000029236 ENSATEG00000021109 rps6ka3b (ENSATEG00000021130) pdha1b (ENSATEG00000021171) acot9.2 (ENSATEG00000021219) SAT1 (ENSATEG00000027737) ##22 apoob (ENSATEG00000021274) KLHL15 (ENSATEG00000021306) EIF2S3 (ENSATEG00000021353) ENSATEG00000021387 ENSATEG00000021401 ENSATEG00000029348 PLD1 (ENSATEG00000021446) TNIK (ENSATEG00000021510) ENSATEG00000021651 rpl22l1 (ENSATEG00000021655) ENSATEG00000021661 cldn11b (ENSATEG00000021669) ENSATEG00000021701 ENSATEG00000028190 ENSATEG00000021721 Carangaria ANCESTRAL SPECIES 21 ENSGT00940000163670.b.a ENSGT01030000234893 ENSGT01020000230622 ENSGT00970000198434 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT01030000235646 ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a ENSGT00960000187826 Carangaria_A ANCESTRAL SPECIES 15 ENSGT00940000163670.b.a ENSGT01030000234893 ENSGT01020000230622 ENSGT00970000198434 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT01030000235646 ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a ENSGT00960000187826 Seriola ANCESTRAL SPECIES 93 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000162952.d.b.a ENSGT00940000177048 Greater amberjack MODERN SPECIES 232 ENSSDUG00000004565 ENSSDUG00000004552 ENSSDUG00000004545 ENSSDUG00000004529 ENSSDUG00000004514 cip2a (ENSSDUG00000004494) si:ch73-264p11.1 (ENSSDUG00000004463) ENSSDUG00000004408 ENSSDUG00000004371 eif1axb (ENSSDUG00000004342) rps6ka3b (ENSSDUG00000004281) pdha1b (ENSSDUG00000004167) acot9.2 (ENSSDUG00000004138) sat1b (ENSSDUG00000004109) ##22 apoob (ENSSDUG00000004092) klhl15 (ENSSDUG00000004040) eif2s3 (ENSSDUG00000003993) ENSSDUG00000003953 ENSSDUG00000003976 ENSSDUG00000003923 PLD1 (ENSSDUG00000003806) TNIK (ENSSDUG00000003392) ENSSDUG00000003339 rpl22l1 (ENSSDUG00000003315) ENSSDUG00000003298 cldn11b (ENSSDUG00000003286) ENSSDUG00000003267 ENSSDUG00000003253 cul1a (ENSSDUG00000003204) Yellowtail amberjack MODERN SPECIES 3269 ENSSLDG00000008008 ENSSLDG00000008058 ENSSLDG00000008099 ENSSLDG00000008212 ENSSLDG00000008228 ENSSLDG00000008239 ENSSLDG00000008244 cip2a (ENSSLDG00000008285) ENSSLDG00000008415 ENSSLDG00000008434 ENSSLDG00000008459 eif1axb (ENSSLDG00000008477) rps6ka3b (ENSSLDG00000008512) pdha1b (ENSSLDG00000008595) acot9.2 (ENSSLDG00000008700) sat1b (ENSSLDG00000008762) ##22 apoob (ENSSLDG00000008807) klhl15 (ENSSLDG00000008828) eif2s3 (ENSSLDG00000008861) ENSSLDG00000008895 ENSSLDG00000008919 ENSSLDG00000009013 ENSSLDG00000009061 PLD1 (ENSSLDG00000009257) TNIK (ENSSLDG00000009349) ENSSLDG00000009425 rpl22l1 (ENSSLDG00000009433) ENSSLDG00000009454 cldn11b (ENSSLDG00000009470) ENSSLDG00000009491 ENSSLDG00000009523 Barramundi perch MODERN SPECIES 84 ENSLCAG00010027035 ENSLCAG00010027034 ENSLCAG00010027032 ENSLCAG00010027028 chrnd (ENSLCAG00010027017) cip2a (ENSLCAG00010027009) ENSLCAG00010027007 zgc:112408 (ENSLCAG00010027005) ENSLCAG00010027003 ENSLCAG00010026998 ENSLCAG00010026996 eif1axb (ENSLCAG00010026993) rps6ka3b (ENSLCAG00010026763) pdha1b (ENSLCAG00010026561) acot9.2 (ENSLCAG00010026553) sat1b (ENSLCAG00010026550) ##22 apoob (ENSLCAG00010026548) klhl15 (ENSLCAG00010026543) eif2s3 (ENSLCAG00010026535) ENSLCAG00010026530 ENSLCAG00010026527 ENSLCAG00010026524 ENSLCAG00010026523 PLD1 (ENSLCAG00010026279) TNIK (ENSLCAG00010025747) ENSLCAG00010025413 rpl22l1 (ENSLCAG00010025405) ENSLCAG00010025400 cldn11b (ENSLCAG00010025391) ENSLCAG00010025388 ENSLCAG00010025387 Pleuronectoidei ANCESTRAL SPECIES 12 ENSGT00940000157755.r ENSGT00940000159906.f ENSGT01000000215671 ENSGT00990000204208 ENSGT00940000163670.b.a ENSGT00970000198434 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000171984 ENSGT00940000166938 ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000156456 ENSGT00730000111293 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000154774 ENSGT00940000155013 Tongue sole MODERN SPECIES 13 dipk2ab (ENSCSEG00000015087) CHST2 (ENSCSEG00000015090) trpc1 (ENSCSEG00000015097) pcolce2b (ENSCSEG00000015120) u2surp (ENSCSEG00000015150) irf9 (ENSCSEG00000015254) ENSCSEG00000015262 psme2 (ENSCSEG00000015276) lsm5 (ENSCSEG00000015286) ENSCSEG00000015295 ENSCSEG00000015303 eif1axb (ENSCSEG00000015312) rps6ka3b (ENSCSEG00000015334) pdha1b (ENSCSEG00000015446) acot9.2 (ENSCSEG00000015508) SAT1 (ENSCSEG00000015551) ##22 apoob (ENSCSEG00000015570) ENSCSEG00000015582 klhl15 (ENSCSEG00000015599) eif2s3 (ENSCSEG00000015632) ENSCSEG00000015658 ENSCSEG00000015669 ENSCSEG00000015676 PLD1 (ENSCSEG00000015688) TNIK (ENSCSEG00000015735) ENSCSEG00000015853 rpl22l1 (ENSCSEG00000015879) ENSCSEG00000016043 cldn11b (ENSCSEG00000016055) ENSCSEG00000016067 cul1a (ENSCSEG00000016078) Turbot MODERN SPECIES 13 ENSSMAG00000011952 ENSSMAG00000027407 ENSSMAG00000012113 ENSSMAG00000029677 ENSSMAG00000012144 ENSSMAG00000012161 ENSSMAG00000009528 cip2a (ENSSMAG00000009573) ENSSMAG00000009652 ENSSMAG00000009669 ENSSMAG00000009714 eif1axb (ENSSMAG00000009834) ENSSMAG00000009879 ENSSMAG00000009979 acot9.2 (ENSSMAG00000010044) SAT1 (ENSSMAG00000010106) ##22 apoob (ENSSMAG00000030113) KLHL15 (ENSSMAG00000010151) EIF2S3 (ENSSMAG00000010192) ENSSMAG00000010225 ENSSMAG00000010241 PLD1 (ENSSMAG00000010266) TNIK (ENSSMAG00000008153) ENSSMAG00000031145 rpl22l1 (ENSSMAG00000008211) ENSSMAG00000008228 cldn11b (ENSSMAG00000023927) ENSSMAG00000026407 ENSSMAG00000008278 ENSSMAG00000008327 ENSSMAG00000008399 Eupercaria ANCESTRAL SPECIES 20 ENSGT00990000204208 ENSGT00940000163670.b.a ENSGT01030000234893 ENSGT01020000230622 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000167146 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a Tetraodontidae ANCESTRAL SPECIES 18 ENSGT01070000253816.b.c ENSGT00390000016814.a ENSGT00940000178471 ENSGT01030000234839 ENSGT00940000158089.b ENSGT00950000182997.b ENSGT00940000159906.f ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000171984 ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a Tetraodon MODERN SPECIES 26 ENSTNIG00000005368 thtpa (ENSTNIG00000005367) dcaf11 (ENSTNIG00000005366) FITM1 (ENSTNIG00000005365) psme1 (ENSTNIG00000005364) pck2 (ENSTNIG00000005363) RAMP3 (ENSTNIG00000000529) chrnd (ENSTNIG00000005362) cip2a (ENSTNIG00000005361) ENSTNIG00000005360 ENSTNIG00000005359 ENSTNIG00000005358 eif1axb (ENSTNIG00000004558) pdha1b (ENSTNIG00000004559) acot9.2 (ENSTNIG00000004560) sat1b (ENSTNIG00000004561) ##22 apoob (ENSTNIG00000004562) klhl15 (ENSTNIG00000004563) eif2s3 (ENSTNIG00000004564) ENSTNIG00000004565 ENSTNIG00000004566 ENSTNIG00000004567 ENSTNIG00000004568 PLD1 (ENSTNIG00000004569) TNIK (ENSTNIG00000002564) ENSTNIG00000002563 rpl22l1 (ENSTNIG00000002562) ENSTNIG00000004125 cldn11b (ENSTNIG00000004126) ENSTNIG00000004127 cul1a (ENSTNIG00000002561) Fugu MODERN SPECIES 1 ENSTRUG00000031426 ENSTRUG00000029422 ENSTRUG00000021344 ENSTRUG00000030554 ENSTRUG00000029428 ENSTRUG00000026253 ENSTRUG00000026541 chrnd (ENSTRUG00000007767) cip2a (ENSTRUG00000007460) ENSTRUG00000021004 zgc:112982 (ENSTRUG00000030957) eif1axb (ENSTRUG00000007017) rps6ka3b (ENSTRUG00000005953) pdha1b (ENSTRUG00000004842) acot9.2 (ENSTRUG00000025401) sat1 (ENSTRUG00000004500) ##22 apoob (ENSTRUG00000020497) klhl15 (ENSTRUG00000003735) eif2s3 (ENSTRUG00000002867) ENSTRUG00000006284 ENSTRUG00000024494 PLD1 (ENSTRUG00000005513) TNIK (ENSTRUG00000003746) ENSTRUG00000028500 rpl22l1 (ENSTRUG00000003154) ENSTRUG00000002825 cldn11b (ENSTRUG00000002558) ENSTRUG00000029298 ENSTRUG00000024361 ssr1 (ENSTRUG00000002722) ENSTRUG00000028120 Eupecaria_A ANCESTRAL SPECIES 19 ENSGT01000000215671 ENSGT00990000204208 ENSGT00940000163670.b.a ENSGT01030000234893 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 Ballan wrasse MODERN SPECIES 247 MAP7D2 (ENSLBEG00000017278) eif1axb (ENSLBEG00000017217) rps6ka3b (ENSLBEG00000017057) ENSLBEG00000017002 pdha1b (ENSLBEG00000016861) acot9.2 (ENSLBEG00000016764) SAT1 (ENSLBEG00000016728) ##22 apoob (ENSLBEG00000016692) klhl15 (ENSLBEG00000016636) eif2s3 (ENSLBEG00000016518) ENSLBEG00000016465 ENSLBEG00000016408 ENSLBEG00000016367 PLD1 (ENSLBEG00000016081) TNIK (ENSLBEG00000015697) ENSLBEG00000015561 rpl22l1 (ENSLBEG00000015538) ENSLBEG00000015504 cldn11b (ENSLBEG00000015436) ENSLBEG00000015410 ENSLBEG00000015386 cul1a (ENSLBEG00000015207) Eupecaria_B ANCESTRAL SPECIES 19 ENSGT01000000215671 ENSGT00990000204208 ENSGT00940000163670.b.a ENSGT01030000234893 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 Perciformes ANCESTRAL SPECIES 21 ENSGT00940000158089.b ENSGT00950000182997.b ENSGT00940000157755.r ENSGT00940000159906.f ENSGT01000000215671 ENSGT00990000204208 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000167146 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a ENSGT00940000177048 Cottioidei ANCESTRAL SPECIES 43 ENSGT00940000158089.b ENSGT00950000182997.b ENSGT00940000157755.r ENSGT00940000159906.f ENSGT01000000215671 ENSGT00990000204208 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000166938 ENSGT00940000167218 ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000162952.d.b.a ENSGT00940000154774 ENSGT00940000155013 Lumpfish MODERN SPECIES 12 ENSCLMG00005022769 ENSCLMG00005022767 ENSCLMG00005022766 ENSCLMG00005022765 ENSCLMG00005022764 ENSCLMG00005022763 chrnd (ENSCLMG00005022755) cip2a (ENSCLMG00005022754) ENSCLMG00005022753 ENSCLMG00005022748 ENSCLMG00005022747 eif1axb (ENSCLMG00005022745) rps6ka3b (ENSCLMG00005022625) pdha1b (ENSCLMG00005022597) acot9.2 (ENSCLMG00005022595) sat1b (ENSCLMG00005022594) ##22 apoob (ENSCLMG00005022593) klhl15 (ENSCLMG00005022591) eif2s3 (ENSCLMG00005022585) ENSCLMG00005022582 ENSCLMG00005022580 ENSCLMG00005022579 ENSCLMG00005022576 PLD1 (ENSCLMG00005022514) TNIK (ENSCLMG00005015930) ENSCLMG00005015816 rpl22l1 (ENSCLMG00005015813) ENSCLMG00005015812 cldn11b (ENSCLMG00005015810) ENSCLMG00005015809 cul1a (ENSCLMG00005015706) Stickleback MODERN SPECIES 100 ENSGACG00000012920 cip2a (ENSGACG00000012895) ENSGACG00000012889 ENSGACG00000012869 ENSGACG00000012864 ENSGACG00000012862 eif1axa (ENSGACG00000012829) ENSGACG00000012827 ENSGACG00000012824 rps6ka3b (ENSGACG00000012811) pdha1b (ENSGACG00000012803) acot9.2 (ENSGACG00000012775) sat1b (ENSGACG00000012745) ##22 apoob (ENSGACG00000012729) klhl15 (ENSGACG00000012722) ENSGACG00000012719 eif2s3 (ENSGACG00000012678) ENSGACG00000012676 ENSGACG00000012670 ENSGACG00000012668 PLD1 (ENSGACG00000012653) TNIK (ENSGACG00000012636) ENSGACG00000012551 ENSGACG00000012547 rpl22l1 (ENSGACG00000012539) ENSGACG00000012533 cldn11b (ENSGACG00000012526) ENSGACG00000012520 Perciformes_a ANCESTRAL SPECIES 36 ENSGT01100000263894 ENSGT00940000158089.b ENSGT00950000182997.b ENSGT00940000157755.r ENSGT00940000159906.f ENSGT00990000204208 ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000167146 ENSGT00940000172693 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000162952.d.b.a ENSGT00940000177048 Channel bull blenny MODERN SPECIES 58 cip2a (ENSCGOG00000006875) ENSCGOG00000006880 ENSCGOG00000006881 ENSCGOG00000006889 ENSCGOG00000006918 ENSCGOG00000006932 eif1axb (ENSCGOG00000006934) rps6ka3b (ENSCGOG00000007214) ENSCGOG00000008722 acot9.2 (ENSCGOG00000008848) sat1b (ENSCGOG00000009063) ##22 ENSCGOG00000009072 ENSCGOG00000009081 Pike perch MODERN SPECIES 66 ENSSLUG00000025993 ENSSLUG00000025992 ENSSLUG00000025988 ENSSLUG00000025984 ENSSLUG00000025982 ENSSLUG00000025980 chrnd (ENSSLUG00000025974) cip2a (ENSSLUG00000025966) si:ch73-264p11.1 (ENSSLUG00000025964) ENSSLUG00000025962 ENSSLUG00000025958 eif1axb (ENSSLUG00000025957) rps6ka3b (ENSSLUG00000025805) pdha1b (ENSSLUG00000025557) acot9.2 (ENSSLUG00000025539) SAT1 (ENSSLUG00000025529) ##22 apoob (ENSSLUG00000025526) klhl15 (ENSSLUG00000025521) eif2s3 (ENSSLUG00000025517) ENSSLUG00000025512 ENSSLUG00000025504 ENSSLUG00000025500 ENSSLUG00000025496 PLD1 (ENSSLUG00000025491) TNIK (ENSSLUG00000025231) ENSSLUG00000025150 rpl22l1 (ENSSLUG00000025147) ENSSLUG00000025142 cldn11b (ENSSLUG00000025135) ENSSLUG00000025132 ENSSLUG00000025131 Eupecaria_C ANCESTRAL SPECIES 19 ENSGT00940000159906.f ENSGT01000000215671 ENSGT00990000204208 ENSGT00940000163670.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 ENSGT00940000154774 Gilthead seabream MODERN SPECIES 10 ENSSAUG00010018304 ENSSAUG00010018308 cip2a (ENSSAUG00010018314) ENSSAUG00010018319 ENSSAUG00010018320 zgc:112408 (ENSSAUG00010018326) ENSSAUG00010018332 ENSSAUG00010018333 ENSSAUG00010018338 ENSSAUG00010018347 ENSSAUG00010018376 eif1axa (ENSSAUG00010018382) rps6ka3b (ENSSAUG00010018399) pdha1b (ENSSAUG00010018922) acot9.2 (ENSSAUG00010019801) SAT1 (ENSSAUG00010019816) ##22 apoob (ENSSAUG00010019817) klhl15 (ENSSAUG00010019818) eif2s3 (ENSSAUG00010019821) ENSSAUG00010019822 ENSSAUG00010019824 ENSSAUG00010019826 ENSSAUG00010019827 rpl22l1 (ENSSAUG00010019828) ENSSAUG00010019840 cldn11b (ENSSAUG00010019849) ENSSAUG00010019850 ENSSAUG00010019851 cul1a (ENSSAUG00010019856) ezh2 (ENSSAUG00010019950) ENSSAUG00010020004 Eupercaria_incertae_sedis ANCESTRAL SPECIES 17 ENSGT00940000157755.r ENSGT00940000159906.f ENSGT00990000204208 ENSGT00940000163670.b.a ENSGT00940000159794 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.f ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00730000111293 ENSGT00940000156456 ENSGT00940000161266 ENSGT00940000155015.g.a ENSGT00950000183196.B.f ENSGT00390000003738.b.d.a ENSGT00940000154509 ENSGT00940000155893.a ENSGT00890000139496.b ENSGT00940000154964.z ENSGT00940000177048 ENSGT00940000154774 Large yellow croaker MODERN SPECIES 494 ENSLCRG00005015145 ENSLCRG00005015144 ENSLCRG00005015140 ENSLCRG00005015138 chrnd (ENSLCRG00005014431) cip2a (ENSLCRG00005014244) si:ch73-264p11.1 (ENSLCRG00005014239) zgc:112408 (ENSLCRG00005014238) ENSLCRG00005014234 ENSLCRG00005014233 ENSLCRG00005014232 eif1axb (ENSLCRG00005014231) rps6ka3b (ENSLCRG00005012483) pdha1b (ENSLCRG00005012031) acot9.2 (ENSLCRG00005012001) sat1b (ENSLCRG00005012000) ##22 apoob (ENSLCRG00005011999) klhl15 (ENSLCRG00005011997) eif2s3 (ENSLCRG00005011960) ENSLCRG00005011957 ENSLCRG00005011950 ENSLCRG00005011942 ENSLCRG00005011930 rmc1 (ENSLCRG00005010094) riok3 (ENSLCRG00005008668) CLVS1 (ENSLCRG00005008658) ASPH (ENSLCRG00005008656) ENSLCRG00005008655 scn5lab (ENSLCRG00005008654) European seabass MODERN SPECIES 27 ENSDLAG00005003733 ENSDLAG00005031056 ENSDLAG00005001891 ENSDLAG00005001957 ENSDLAG00005029940 ENSDLAG00005002032 ENSDLAG00005002029 ENSDLAG00005002036 ENSDLAG00005018441 MAP7D2 (ENSDLAG00005033599) EIF1AX (ENSDLAG00005002070) rps6ka3b (ENSDLAG00005002745) pdha1b (ENSDLAG00005005291) ENSDLAG00005006633 apoob (ENSDLAG00005034422) SAT1 (ENSDLAG00005032687) ##22 KLHL15 (ENSDLAG00005007280) EIF2S3 (ENSDLAG00005007326) ENSDLAG00005028096 ENSDLAG00005007369 ENSDLAG00005030583 PLD1 (ENSDLAG00005007504) TNIK (ENSDLAG00005010108) ENSDLAG00005011026 RPL22L1 (ENSDLAG00005032982) ENSDLAG00005027293 ENSDLAG00005011123 ENSDLAG00005030333 ENSDLAG00005028805 ENSDLAG00005032248 ENSDLAG00005016388 Pinecone sodierfish MODERN SPECIES 12 ENSMMDG00005014031 ENSMMDG00005014043 ENSMMDG00005014046 ENSMMDG00005014048 ENSMMDG00005014050 chrnd (ENSMMDG00005014054) cip2a (ENSMMDG00005014067) ENSMMDG00005014364 zgc:112408 (ENSMMDG00005014371) ENSMMDG00005014380 zgc:112982 (ENSMMDG00005014429) eif1axb (ENSMMDG00005014437) rps6ka3b (ENSMMDG00005014542) pdha1b (ENSMMDG00005019137) acot9.2 (ENSMMDG00005020007) sat1b (ENSMMDG00005020664) ##22 apoob (ENSMMDG00005020668) klhl15 (ENSMMDG00005020671) eif2s3 (ENSMMDG00005020684) ENSMMDG00005020729 ENSMMDG00005020734 ENSMMDG00005020737 ENSMMDG00005020772 ENSMMDG00005021256 ENSMMDG00005021310 rpl22l1 (ENSMMDG00005021313) ENSMMDG00005021318 cldn11b (ENSMMDG00005021322) cul1a (ENSMMDG00005021328) ezh2 (ENSMMDG00005021370) emc9 (ENSMMDG00005021387) Cod DUPLICATION Cod MODERN SPECIES 15 ENSGMOG00000030936 dipk1c (ENSGMOG00000009676) tubb6 (ENSGMOG00000007552) ENSGMOG00000034699 ENSGMOG00000007557 ENSGMOG00000034460 ENSGMOG00000024783 ENSGMOG00000007561 ENSGMOG00000029655 ENSGMOG00000004233 ENSGMOG00000004236 ENSGMOG00000036824 EIF2S3 (ENSGMOG00000004311) ENSGMOG00000004337 ENSGMOG00000004355 ENSGMOG00000006922 ##22 SAT1 (ENSGMOG00000032336) ##22 ENSGMOG00000025106 ENSGMOG00000004381 pdha1b (ENSGMOG00000004411) rps6ka3b (ENSGMOG00000004426) ENSGMOG00000036612 eif1axb (ENSGMOG00000004469) ENSGMOG00000033880 ENSGMOG00000031715 ENSGMOG00000029023 ENSGMOG00000023804 ENSGMOG00000010863 ENSGMOG00000030781 ENSGMOG00000007643 ENSGMOG00000034157 Cod MODERN SPECIES 15 ENSGMOG00000034915 ENSGMOG00000034157 ENSGMOG00000007643 ENSGMOG00000030781 ENSGMOG00000010863 ENSGMOG00000023804 ENSGMOG00000029023 ENSGMOG00000031715 ENSGMOG00000033880 eif1axb (ENSGMOG00000004469) ENSGMOG00000036612 rps6ka3b (ENSGMOG00000004426) pdha1b (ENSGMOG00000004411) ENSGMOG00000004381 ENSGMOG00000025106 SAT1 (ENSGMOG00000032336) ##22 ENSGMOG00000006922 ##22 ENSGMOG00000004355 ENSGMOG00000004337 EIF2S3 (ENSGMOG00000004311) ENSGMOG00000036824 ENSGMOG00000004236 ENSGMOG00000004233 ENSGMOG00000029655 ENSGMOG00000007561 ENSGMOG00000024783 ENSGMOG00000034460 ENSGMOG00000007557 ENSGMOG00000034699 tubb6 (ENSGMOG00000007552) dipk1c (ENSGMOG00000009676) Osteoglossocephalai ANCESTRAL SPECIES 387 ENSGT00940000159028 ENSGT00940000164655 ENSGT00870000136493.c ENSGT00940000156285 ENSGT00950000182941.b.b.b.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00530000063666.b.db ENSGT00940000167353 Clupeocephala ANCESTRAL SPECIES 207 ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00530000063666.b.db ENSGT01090000261942 ENSGT00950000182962.a.a.c ENSGT00940000155647.bb ENSGT00390000014424 ENSGT00530000063174.a.k ENSGT00390000005330 ENSGT00950000185751 ENSGT00950000183121.b.b.b.b.w ##22 ENSGT00530000063666.b.eb ENSGT00940000159116 ENSGT00550000074801 ENSGT00940000164731 ENSGT01050000244868 ENSGT00440000034309 Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 107 ENSGT01030000234590.B.a.a.e.a ENSGT00730000110966.a.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.d ENSGT00940000159370.c ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.b ENSGT00940000156558.a.b ENSGT00950000182962.a.a.c ENSGT00940000155647.bb ENSGT00390000014424 ENSGT00940000156043 ENSGT00390000017765.a ENSGT00940000159385.b ENSGT01030000234788 Otophysi ANCESTRAL SPECIES 264 ENSGT00940000156309.B.g ENSGT00940000153783.b.a.a.b ENSGT00940000165992.a.b ENSGT00940000153916.A.a ENSGT01030000234590.B.a.a.e.a ENSGT00730000110966.a.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00390000008256.rd.b ENSGT00940000159370.c ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b ENSGT00550000074787.c.b Characiphysae ANCESTRAL SPECIES 128 ENSGT00940000166995 ENSGT01040000240503.B ENSGT00530000063882.b ENSGT00940000165351 ENSGT00940000156309.B.g ENSGT00940000153783.b.a.a.b ENSGT00940000165992.a.b ENSGT00990000208422 ENSGT01030000234590.B.a.a.e.a ENSGT00730000110966.a.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00940000177567 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b ENSGT00550000074787.c.b ENSGT00390000005492.d ENSGT00940000165297.k.a Characiphysae_b ANCESTRAL SPECIES 165 ENSGT00940000163587.a.b.b.e.a ENSGT00950000183153.c.a.q ENSGT00390000004049.a ENSGT00940000157496 ENSGT00940000156309.B.g ENSGT00940000153783.b.a.a.b ENSGT00940000165992.a.b ENSGT00990000208422 ENSGT01030000234590.B.a.a.e.a ENSGT00730000110966.a.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00940000177567 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b ENSGT00550000074787.c.b ENSGT00390000005492.d ENSGT00940000165297.k.a Electric eel MODERN SPECIES 29 phf23a (ENSEEEG00000016207) plscr3a (ENSEEEG00000016210) senp3a (ENSEEEG00000016211) eif4a1b (ENSEEEG00000016231) sox19a (ENSEEEG00000017371) ENSEEEG00000017372 tm4sf21a (ENSEEEG00000017374) slc25a15b (ENSEEEG00000017375) mrps31 (ENSEEEG00000017376) si:ch211-114c12.2 (ENSEEEG00000017377) ENSEEEG00000017379 ENSEEEG00000017382 ENSEEEG00000017549 pdha1a (ENSEEEG00000020228) prdx4 (ENSEEEG00000020254) sat1a.1 (ENSEEEG00000020302) ##22 sat1a.2 (ENSEEEG00000020308) ##22 apooa (ENSEEEG00000020316) ENSEEEG00000020318 ENSEEEG00000020319 CSTB (ENSEEEG00000020320) ENSEEEG00000020321 zdhhc23a (ENSEEEG00000020322) atp6v1aa (ENSEEEG00000020323) srrt (ENSEEEG00000020326) ENSEEEG00000020331 Channel catfish MODERN SPECIES 20 ENSIPUG00000020771 eno3 (ENSIPUG00000020777) rnf167 (ENSIPUG00000020788) spag7 (ENSIPUG00000020796) slc25a11 (ENSIPUG00000020802) KCNAB3 (ENSIPUG00000020851) psmb6 (ENSIPUG00000020905) kif1c (ENSIPUG00000020865) tnfsf13 (ENSIPUG00000020916) ENSIPUG00000020921 ephb4 (ENSIPUG00000020938) ENSIPUG00000020975 dcx (ENSIPUG00000020989) ENSIPUG00000020995 ENSIPUG00000021004 sat1 (ENSIPUG00000021020) ##22 CMAS (ENSIPUG00000021032) nansb (ENSIPUG00000021048) sat1a.2 (ENSIPUG00000021076) ##22 ApoO (ENSIPUG00000021059) ENSIPUG00000021096 ENSIPUG00000021105 zfx (ENSIPUG00000021113) ENSIPUG00000021142 zdhhc23a (ENSIPUG00000021146) srrt (ENSIPUG00000021150) ENSIPUG00000021192 tm4sf21a (ENSIPUG00000021197) SLC25A15 (ENSIPUG00000021205) MRPS31 (ENSIPUG00000021226) si:ch211-114c12.2 (ENSIPUG00000021246) Cyprinoidei ANCESTRAL SPECIES 16 ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00390000010822 ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00940000165297.k.a.a ENSGT00940000165297.k.a.b ENSGT00390000005492.d ENSGT00940000153430.a.a.g ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000165628 ENSGT00940000155946.c.b ENSGT00940000154079.b.b ENSGT00940000160616 ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00940000164541 ENSGT00390000000642 ENSGT00390000016543.d Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 1431 ENSGT00940000153430.a.a.g.b ENSGT00950000183121.b.b.b.b.x.a.a ##22 Goldfish MODERN SPECIES 51 ywhag1 (ENSCARG00000056390) hspb1 (ENSCARG00000056371) ENSCARG00000056344 ENSCARG00000056336 ENSCARG00000055743 rpain (ENSCARG00000055695) c1qbp (ENSCARG00000055665) znhit3 (ENSCARG00000055653) MYO19 (ENSCARG00000054653) pigw (ENSCARG00000054591) ggnbp2 (ENSCARG00000054479) dhrs11a (ENSCARG00000054458) ENSCARG00000054444 srrt (ENSCARG00000052535) prdx4 (ENSCARG00000052043) sat1a.1 (ENSCARG00000051967) ##22 ENSCARG00000051931 apooa (ENSCARG00000051898) ENSCARG00000051881 zgc:153704 (ENSCARG00000051858) ENSCARG00000051844 ENSCARG00000051835 ENSCARG00000051828 ENSCARG00000051824 ENSCARG00000051802 ENSCARG00000051795 ENSCARG00000051776 ENSCARG00000051764 ENSCARG00000051738 ENSCARG00000051695 ENSCARG00000051686 Cyprininae_a ANCESTRAL SPECIES 1088 ENSGT00940000153430.a.a.g.b ENSGT00950000183121.b.b.b.b.x.a.a ##22 Golden-line barbel MODERN SPECIES 141 ENSSGRG00000044138 ENSSGRG00000044141 ywhag1 (ENSSGRG00000044142) hspb1 (ENSSGRG00000044144) ENSSGRG00000044146 rpain (ENSSGRG00000044147) c1qbp (ENSSGRG00000044148) znhit3 (ENSSGRG00000044150) MYO19 (ENSSGRG00000044151) pigw (ENSSGRG00000044169) ggnbp2 (ENSSGRG00000044184) dhrs11a (ENSSGRG00000044507) ENSSGRG00000044553 srrt (ENSSGRG00000044556) prdx4 (ENSSGRG00000044559) sat1a.1 (ENSSGRG00000044573) ##22 ENSSGRG00000044656 ENSSGRG00000044657 zgc:153704 (ENSSGRG00000044659) ENSSGRG00000044660 ENSSGRG00000044661 ENSSGRG00000044663 ENSSGRG00000044668 ENSSGRG00000044669 angptl2a (ENSSGRG00000044670) lmx1ba (ENSSGRG00000044673) mvb12ba (ENSSGRG00000044680) ENSSGRG00000044683 MAPKAP1 (ENSSGRG00000044700) AJM1 (ENSSGRG00000045024) ENSSGRG00000045025 Cyprininae ANCESTRAL SPECIES 25 ENSGT00940000159210.j ENSGT00390000018406.c ENSGT00390000010822.b ENSGT00940000157382.n.b ENSGT00390000013520.e ENSGT00940000157382.n.a ENSGT00390000013520.f ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00940000165297.k.a.a ENSGT00940000165297.k.a.b.a ENSGT00940000165297.k.a.b.b.a ENSGT00390000005492.d.c ENSGT00940000153430.a.a.g.a.b ENSGT00950000183121.b.b.b.b.x.a.b ##22 ENSGT00940000164731.k.b ENSGT01050000244868.i.a ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db.a.a ENSGT00940000167353 ENSGT00940000164731.k.a ENSGT01050000244868.i.b ENSGT00940000154826.f.b ENSGT00940000165845.c.b.a ENSGT00940000165628 ENSGT00940000155946.c.b.b ENSGT00940000154079.b.b.b ENSGT00940000160616.`b.a ENSGT00940000157955.d.a.g ENSGT00940000155945.i.a.f Goldfish DUPLICATION Goldfish MODERN SPECIES 783 ENSCARG00000049002 ENSCARG00000048982 ENSCARG00000048963 srrt (ENSCARG00000047653) prdx4 (ENSCARG00000047294) sat1a.1 (ENSCARG00000047240) ##22 ENSCARG00000047212 Goldfish MODERN SPECIES 44 ENSCARG00000021142 ENSCARG00000021139 ENSCARG00000021014 c1qbp (ENSCARG00000020990) znhit3 (ENSCARG00000020979) MYO19 (ENSCARG00000020892) pigw (ENSCARG00000020874) ggnbp2 (ENSCARG00000020789) dhrs11a (ENSCARG00000020775) ENSCARG00000020725 ENSCARG00000020697 ENSCARG00000020678 ENSCARG00000020622 srrt (ENSCARG00000020477) prdx4 (ENSCARG00000020376) sat1a.1 (ENSCARG00000020342) ##22 ENSCARG00000020326 zgc:153704 (ENSCARG00000020308) ENSCARG00000020242 supt4h1 (ENSCARG00000020208) ENSCARG00000020198 ENSCARG00000020188 ENSCARG00000020183 ENSCARG00000020180 ENSCARG00000020177 trabd2a (ENSCARG00000020151) ENSCARG00000020145 rnf170 (ENSCARG00000020126) june (ENSCARG00000020121) ENSCARG00000020106 ENSCARG00000020089 Zebrafish MODERN SPECIES 20 ENSDARG00000089107 ENSDARG00000104054 rpain (ENSDARG00000063021) c1qbp (ENSDARG00000039887) znhit3 (ENSDARG00000023950) MYO19 (ENSDARG00000073761) pigw (ENSDARG00000079244) ggnbp2 (ENSDARG00000055086) dhrs11a (ENSDARG00000046090) ENSDARG00000046091 ENSDARG00000108953 ENSDARG00000108340 ENSDARG00000046092 srrt (ENSDARG00000017762) prdx4 (ENSDARG00000069013) sat1a.1 (ENSDARG00000035652) ##22 sat1a.2 (ENSDARG00000095908) ##22 apooa (ENSDARG00000104696) ENSDARG00000098424 zgc:153704 (ENSDARG00000045979) cst14b.1 (ENSDARG00000117133) ENSDARG00000101063 ENSDARG00000117107 ENSDARG00000112540 angptl2a (ENSDARG00000024030) zbtb43 (ENSDARG00000045983) lmx1ba (ENSDARG00000104815) mvb12ba (ENSDARG00000091619) ENSDARG00000089262 MAPKAP1 (ENSDARG00000091777) RABL6 (ENSDARG00000079046) Clupeiformes ANCESTRAL SPECIES 143 ENSGT00940000169096 ENSGT00930000151482 ENSGT00730000110966.a.b.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.d.a.b ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT01090000261942 ENSGT00940000164731.k ENSGT01050000244868.f ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.b ENSGT01010000225766 ENSGT00940000156558.a.b ENSGT00550000074787.c.b ENSGT00950000182962.a.a.c ENSGT00940000155647.bb ENSGT00390000014424 ENSGT00940000154361.A Denticle herring MODERN SPECIES 16 HTR3B (ENSDCDG00000033021) USP28 (ENSDCDG00000031265) zw10 (ENSDCDG00000031148) ENSDCDG00000031106 ENSDCDG00000031076 si:dkey-183i3.5 (ENSDCDG00000031073) slc25a15b (ENSDCDG00000031070) mrps31 (ENSDCDG00000031065) si:ch211-114c12.2 (ENSDCDG00000031061) ENSDCDG00000031057 map7d2a (ENSDCDG00000031055) ENSDCDG00000031047 ENSDCDG00000024155 pdha1a (ENSDCDG00000023848) prdx4 (ENSDCDG00000023839) sat1a.1 (ENSDCDG00000023836) ##22 sat1a.2 (ENSDCDG00000023833) ##22 apooa (ENSDCDG00000023829) ENSDCDG00000023827 ENSDCDG00000023825 cst14b.1 (ENSDCDG00000023824) ENSDCDG00000023823 ENSDCDG00000023822 ENSDCDG00000023821 ENSDCDG00000023820 zdhhc23a (ENSDCDG00000023818) atp6v1aa (ENSDCDG00000023799) ENSDCDG00000023796 gtf3aa (ENSDCDG00000023792) mtif3 (ENSDCDG00000023790) gsx1 (ENSDCDG00000023787) Otomorpha ANCESTRAL SPECIES 107 ENSGT00730000110966.a.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.d ENSGT00940000159370.c ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.b ENSGT00940000156558.a.b ENSGT00950000182962.a.a.c ENSGT00940000155647.bb ENSGT00390000014424 ENSGT00940000156043 ENSGT00390000017765.a ENSGT00940000159385.b ENSGT01030000234788 ENSGT00940000159385.a.b Clupeiformes ANCESTRAL SPECIES 143 ENSGT00930000151482 ENSGT00730000110966.a.b.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT01030000234614.B.a.b ENSGT00940000166938 ENSGT00950000183163.b ENSGT00950000182941.b.b.b.b ENSGT00390000008256 ENSGT00940000159370.d.a.b ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT01090000261942 ENSGT00940000164731.k ENSGT01050000244868.f ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.b ENSGT01010000225766 ENSGT00940000156558.a.b ENSGT00550000074787.c.b ENSGT00950000182962.a.a.c ENSGT00940000155647.bb ENSGT00390000014424 ENSGT00940000154361.A ENSGT00940000156043 Denticle herring MODERN SPECIES 16 USP28 (ENSDCDG00000031265) zw10 (ENSDCDG00000031148) ENSDCDG00000031106 ENSDCDG00000031076 si:dkey-183i3.5 (ENSDCDG00000031073) slc25a15b (ENSDCDG00000031070) mrps31 (ENSDCDG00000031065) si:ch211-114c12.2 (ENSDCDG00000031061) ENSDCDG00000031057 map7d2a (ENSDCDG00000031055) ENSDCDG00000031047 ENSDCDG00000024155 pdha1a (ENSDCDG00000023848) prdx4 (ENSDCDG00000023839) sat1a.1 (ENSDCDG00000023836) ##22 sat1a.2 (ENSDCDG00000023833) ##22 apooa (ENSDCDG00000023829) ENSDCDG00000023827 ENSDCDG00000023825 cst14b.1 (ENSDCDG00000023824) ENSDCDG00000023823 ENSDCDG00000023822 ENSDCDG00000023821 ENSDCDG00000023820 zdhhc23a (ENSDCDG00000023818) atp6v1aa (ENSDCDG00000023799) ENSDCDG00000023796 gtf3aa (ENSDCDG00000023792) mtif3 (ENSDCDG00000023790) gsx1 (ENSDCDG00000023787) abhd10a (ENSDCDG00000023785) Atlantic herring MODERN SPECIES 24 si:dkey-183i3.5 (ENSCHAG00000003822) slc25a15b (ENSCHAG00000003887) mrps31 (ENSCHAG00000003907) ENSCHAG00000003952 ENSCHAG00000004006 ENSCHAG00000004050 pdha1a (ENSCHAG00000005694) ENSCHAG00000005907 prdx4 (ENSCHAG00000005932) sat1a.2 (ENSCHAG00000006105) ##22 apooa (ENSCHAG00000006136) ENSCHAG00000006152 ENSCHAG00000006157 ENSCHAG00000006174 ENSCHAG00000006187 ADAMTS2 (ENSCHAG00000006225) cnot6a (ENSCHAG00000007040) ENSCHAG00000007099 adra2db (ENSCHAG00000007110) SLC34A1 (ENSCHAG00000007122) ENSCHAG00000007321 ENSCHAG00000007330 arl3l1 (ENSCHAG00000007349) ENSCHAG00000007366 rbm22 (ENSCHAG00000007414) Otophysi ANCESTRAL SPECIES 264 ENSGT00940000156309.B.g ENSGT00940000153783.b.a.a.b ENSGT00940000165992.a.b ENSGT00940000153916.A.a ENSGT01030000234590.B.a.a.e.a ENSGT00730000110966.a.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00390000008256.rd.b ENSGT00940000159370.c ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b ENSGT00550000074787.c.b Cyprinoidei ANCESTRAL SPECIES 16 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00390000010822 ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00940000165297.k.a.a ENSGT00940000165297.k.a.b ENSGT00390000005492.d ENSGT00940000153430.a.a.g ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000165628 ENSGT00940000155946.c.b ENSGT00940000154079.b.b ENSGT00940000160616 ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00940000164541 ENSGT00390000000642 ENSGT00390000016543.d ENSGT00390000016002.o.b.a Cyprininae ANCESTRAL SPECIES 25 ENSGT00940000157382.n.b ENSGT00390000013520.e ENSGT00940000157382.n.a ENSGT00390000013520.f ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00940000165297.k.a.a ENSGT00940000165297.k.a.b.a ENSGT00940000165297.k.a.b.b.a ENSGT00390000005492.d.c ENSGT00940000153430.a.a.g.a.b ENSGT00950000183121.b.b.b.b.x.a.b ##22 ENSGT00940000164731.k.b ENSGT01050000244868.i.a ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db.a.a ENSGT00940000167353 ENSGT00940000164731.k.a ENSGT01050000244868.i.b ENSGT00940000154826.f.b ENSGT00940000165845.c.b.a ENSGT00940000165628 ENSGT00940000155946.c.b.b ENSGT00940000154079.b.b.b ENSGT00940000160616.`b.a ENSGT00940000157955.d.a.g ENSGT00940000155945.i.a.f ENSGT00940000163762.b.h.b ENSGT00390000000642.j ENSGT00390000016543.d.b Cyprininae_a ANCESTRAL SPECIES 26 ENSGT00940000165297.k.a.b.b.a ENSGT00390000005492.d.c ENSGT00940000153430.a.a.g.a.b ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db.a.a ENSGT00940000167353 ENSGT00940000164731.k.a ENSGT01050000244868.i.a ENSGT00940000154826.f.b ENSGT00940000165845.c.b.a ENSGT00940000165628 ENSGT00940000155946.c.b.b ENSGT00940000160616.`b.a ENSGT00940000157955.d.a.g ENSGT00940000155945.i.a.f ENSGT00940000163762.b.h.b ENSGT00390000000642.j ENSGT00390000016543.d.b ENSGT00390000016002.o.b.b Common carp reference DUPLICATION Common carp reference MODERN SPECIES 7 ENSCCRG00000035029 hspb1 (ENSCCRG00000069777) SRRM3 (ENSCCRG00000078835) ENSCCRG00000004896 c1qbp (ENSCCRG00000030531) znhit3 (ENSCCRG00000055115) pigw (ENSCCRG00000059201) ggnbp2 (ENSCCRG00000034572) dhrs11a (ENSCCRG00000034601) ENSCCRG00000035241 ENSCCRG00000035246 ENSCCRG00000035256 ENSCCRG00000057331 srrt (ENSCCRG00000034646) prdx4 (ENSCCRG00000035260) sat1a.2 (ENSCCRG00000035264) ##22 apooa (ENSCCRG00000069490) ENSCCRG00000020757 zgc:153704 (ENSCCRG00000020769) ENSCCRG00000029591 ENSCCRG00000053311 ENSCCRG00000058083 ENSCCRG00000028670 RALGPS1 (ENSCCRG00000028667) zbtb43 (ENSCCRG00000028664) lmx1ba (ENSCCRG00000071646) mvb12ba (ENSCCRG00000073768) ENSCCRG00000026277 MAPKAP1 (ENSCCRG00000024033) ENSCCRG00000064613 ENSCCRG00000075954 Common carp reference MODERN SPECIES 15 ENSCCRG00000053391 ywhag1 (ENSCCRG00000067981) ENSCCRG00000060619 ENSCCRG00000074337 ENSCCRG00000073926 rpain (ENSCCRG00000030523) c1qbp (ENSCCRG00000058149) znhit3 (ENSCCRG00000077670) MYO19 (ENSCCRG00000032677) pigw (ENSCCRG00000032662) ggnbp2 (ENSCCRG00000034598) dhrs11a (ENSCCRG00000055687) ENSCCRG00000034609 srrt (ENSCCRG00000010285) prdx4 (ENSCCRG00000067453) sat1a.2 (ENSCCRG00000021595) ##22 apooa (ENSCCRG00000062516) ENSCCRG00000015229 ENSCCRG00000054270 zgc:153704 (ENSCCRG00000057128) ENSCCRG00000058910 ENSCCRG00000020778 ENSCCRG00000028677 ENSCCRG00000008349 zbtb43 (ENSCCRG00000080395) lmx1ba (ENSCCRG00000029929) mvb12ba (ENSCCRG00000021323) ENSCCRG00000046204 MAPKAP1 (ENSCCRG00000017819) ENSCCRG00000082343 ENSCCRG00000060244 Golden-line barbel MODERN SPECIES 809 ENSSGRG00000041193 ywhag1 (ENSSGRG00000041195) hspb1 (ENSSGRG00000041206) ENSSGRG00000041212 ENSSGRG00000041216 srrt (ENSSGRG00000041231) ENSSGRG00000041299 ENSSGRG00000041306 dhrs11a (ENSSGRG00000041308) ggnbp2 (ENSSGRG00000041311) pigw (ENSSGRG00000041348) ENSSGRG00000041359 znhit3 (ENSSGRG00000041374) sat1a.2 (ENSSGRG00000041380) ##22 apooa (ENSSGRG00000041404) ENSSGRG00000041405 zgc:153704 (ENSSGRG00000041406) ENSSGRG00000041407 ENSSGRG00000041408 Zebrafish MODERN SPECIES 20 ENSDARG00000104054 rpain (ENSDARG00000063021) c1qbp (ENSDARG00000039887) znhit3 (ENSDARG00000023950) MYO19 (ENSDARG00000073761) pigw (ENSDARG00000079244) ggnbp2 (ENSDARG00000055086) dhrs11a (ENSDARG00000046090) ENSDARG00000046091 ENSDARG00000108953 ENSDARG00000108340 ENSDARG00000046092 srrt (ENSDARG00000017762) prdx4 (ENSDARG00000069013) sat1a.1 (ENSDARG00000035652) ##22 sat1a.2 (ENSDARG00000095908) ##22 apooa (ENSDARG00000104696) ENSDARG00000098424 zgc:153704 (ENSDARG00000045979) cst14b.1 (ENSDARG00000117133) ENSDARG00000101063 ENSDARG00000117107 ENSDARG00000112540 angptl2a (ENSDARG00000024030) zbtb43 (ENSDARG00000045983) lmx1ba (ENSDARG00000104815) mvb12ba (ENSDARG00000091619) ENSDARG00000089262 MAPKAP1 (ENSDARG00000091777) RABL6 (ENSDARG00000079046) ENSDARG00000115005 Characiphysae ANCESTRAL SPECIES 128 ENSGT01040000240503.B ENSGT00530000063882.b ENSGT00940000165351 ENSGT00940000156309.B.g ENSGT00940000153783.b.a.a.b ENSGT00940000165992.a.b ENSGT00990000208422 ENSGT01030000234590.B.a.a.e.a ENSGT00730000110966.a.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00940000177567 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b ENSGT00550000074787.c.b ENSGT00390000005492.d ENSGT00940000165297.k.a Channel catfish MODERN SPECIES 20 spag7 (ENSIPUG00000020796) slc25a11 (ENSIPUG00000020802) KCNAB3 (ENSIPUG00000020851) psmb6 (ENSIPUG00000020905) kif1c (ENSIPUG00000020865) tnfsf13 (ENSIPUG00000020916) ENSIPUG00000020921 ephb4 (ENSIPUG00000020938) ENSIPUG00000020975 dcx (ENSIPUG00000020989) ENSIPUG00000020995 ENSIPUG00000021004 sat1 (ENSIPUG00000021020) ##22 CMAS (ENSIPUG00000021032) nansb (ENSIPUG00000021048) sat1a.2 (ENSIPUG00000021076) ##22 ApoO (ENSIPUG00000021059) ENSIPUG00000021096 ENSIPUG00000021105 zfx (ENSIPUG00000021113) ENSIPUG00000021142 zdhhc23a (ENSIPUG00000021146) srrt (ENSIPUG00000021150) ENSIPUG00000021192 tm4sf21a (ENSIPUG00000021197) SLC25A15 (ENSIPUG00000021205) MRPS31 (ENSIPUG00000021226) si:ch211-114c12.2 (ENSIPUG00000021246) ENSIPUG00000021255 EIF1AX (ENSIPUG00000021259) ENSIPUG00000021265 Characiphysae_b ANCESTRAL SPECIES 165 ENSGT00950000183153.c.a.q ENSGT00390000004049.a ENSGT00940000157496 ENSGT00940000156309.B.g ENSGT00940000153783.b.a.a.b ENSGT00940000165992.a.b ENSGT00990000208422 ENSGT01030000234590.B.a.a.e.a ENSGT00730000110966.a.b ENSGT00390000010017 ENSGT00410000026585 ENSGT00940000177567 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.a ##22 ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.k ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b ENSGT00550000074787.c.b ENSGT00390000005492.d ENSGT00940000165297.k.a Characoidei ANCESTRAL SPECIES 365 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x.b ##22 ENSGT00530000063666.b.db ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.k Red-bellied piranha MODERN SPECIES 1016 sox19a (ENSPNAG00000017605) ENSPNAG00000017636 ENSPNAG00000017652 ENSPNAG00000017713 prdx4 (ENSPNAG00000018126) sat1a.2 (ENSPNAG00000018180) ##22 apooa (ENSPNAG00000018196) ENSPNAG00000018257 ENSPNAG00000018278 zgc:153704 (ENSPNAG00000018300) cst14b.1 (ENSPNAG00000018311) ENSPNAG00000018328 Mexicana tetra MODERN SPECIES 1211 ENSAMXG00000038528 eif1axa (ENSAMXG00000031325) ENSAMXG00000041269 ENSAMXG00000029608 pdha1a (ENSAMXG00000035787) prdx4 (ENSAMXG00000037570) sat1a.2 (ENSAMXG00000038246) ##22 apooa (ENSAMXG00000006877) CXorf58 (ENSAMXG00000031028) ENSAMXG00000006887 ENSAMXG00000016286 Electric eel MODERN SPECIES 29 plscr3a (ENSEEEG00000016210) senp3a (ENSEEEG00000016211) eif4a1b (ENSEEEG00000016231) sox19a (ENSEEEG00000017371) ENSEEEG00000017372 tm4sf21a (ENSEEEG00000017374) slc25a15b (ENSEEEG00000017375) mrps31 (ENSEEEG00000017376) si:ch211-114c12.2 (ENSEEEG00000017377) ENSEEEG00000017379 ENSEEEG00000017382 ENSEEEG00000017549 pdha1a (ENSEEEG00000020228) prdx4 (ENSEEEG00000020254) sat1a.1 (ENSEEEG00000020302) ##22 sat1a.2 (ENSEEEG00000020308) ##22 apooa (ENSEEEG00000020316) ENSEEEG00000020318 ENSEEEG00000020319 CSTB (ENSEEEG00000020320) ENSEEEG00000020321 zdhhc23a (ENSEEEG00000020322) atp6v1aa (ENSEEEG00000020323) srrt (ENSEEEG00000020326) ENSEEEG00000020331 Euteleosteomorpha ANCESTRAL SPECIES 174 ENSGT00940000163831.f ENSGT00940000156040.f ENSGT00940000160633.a.b ENSGT00940000155053.c.b ENSGT00390000004986 ENSGT00940000159028 ENSGT00940000164655 ENSGT00870000136493.c ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00530000063666.b.db ENSGT01090000261942 ENSGT00950000182962.a.a.c ENSGT00940000155647.bb ENSGT00390000014424 ENSGT00940000167353 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b Protacanthopterygii ANCESTRAL SPECIES 83 ENSGT00940000156040.f ENSGT00940000160633.a.b ENSGT00940000155053.c.b ENSGT00390000004986 ENSGT00940000159028 ENSGT00940000164655 ENSGT00870000136493.c ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00390000008256.vd.a ENSGT00940000159370.f ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00530000063666.b.db ENSGT01090000261942 ENSGT00950000182962.a.a.c ENSGT00940000155647.bb ENSGT00390000014424 ENSGT01030000234788 ENSGT00940000159385.e.b ENSGT00940000153322.B.d.b ENSGT00940000164978.b.d ENSGT00940000160838 ENSGT00940000157596 ENSGT00940000158378 ENSGT00940000159458 ENSGT00940000160779 ENSGT00940000158617 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 107 ENSGT00940000156040.f.a ENSGT00940000160633.a.b.c ENSGT00940000155053.c.b.a ENSGT00390000004986.f ENSGT00940000159028.j ENSGT00940000164655 ENSGT00870000136493.c ENSGT00940000156285.`c ENSGT00940000176119 ENSGT00410000026585.b ENSGT00950000182941.b.b.b.a.d.a ENSGT00390000008256.vd.a.b ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ##22 ENSGT00530000063666.b.db.g ENSGT00940000167353 ENSGT00940000164731.i ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ENSGT00550000074787.d.a.b.a ENSGT00940000157443.d.a.a ENSGT00950000182962.a.a.c.a ENSGT00390000014424.i ENSGT00940000156043.fb.a ENSGT00390000017765.a.c ENSGT01030000234788 ENSGT00940000159385.e.b ENSGT00940000153322.B.d.b.c Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00940000156040.f.a ENSGT00940000160633.a.b.c ENSGT00940000155053.c.b.a ENSGT00390000004986.f ENSGT00940000159028.j ENSGT00940000164655 ENSGT00870000136493.c ENSGT00940000156285.`c ENSGT00940000176119 ENSGT00410000026585.b ENSGT00950000182941.b.b.b.a.d.a ENSGT00390000008256.vd.a.b ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ##22 ENSGT00530000063666.b.db.g ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.i ENSGT01050000244868.c.b.d ENSGT01010000223723 ENSGT00940000164430.a.b.a.f ENSGT00940000154826 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ENSGT00550000074787.d.a.b.a ENSGT00940000157443.d.a.a ENSGT00950000182962.a.a.c.a ENSGT00390000014424.i ENSGT00940000156043.fb.a Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00940000156040.f.a ENSGT00940000160633.a.b.c ENSGT00940000155053.c.b.a ENSGT00390000004986.f ENSGT00940000159028.j ENSGT00940000164655 ENSGT00870000136493.c ENSGT00940000156285.`c ENSGT00940000176119 ENSGT00410000026585.b ENSGT00950000182941.b.b.b.a.d.a ENSGT00390000008256.vd.a.b ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ##22 ENSGT00530000063666.b.db.g ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.i ENSGT01050000244868.c.b.d ENSGT01010000223723.b ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ENSGT00550000074787.d.a.b.a ENSGT00940000157443.d.a.a ENSGT00950000182962.a.a.c.a ENSGT00390000014424.i ENSGT00940000156043.fb.a ENSGT00390000017765.a.c Rainbow trout MODERN SPECIES 1 ARX (ENSOMYG00000046051) ENSOMYG00000046054 ccdc82 (ENSOMYG00000046058) poglut3 (ENSOMYG00000046072) ENSOMYG00000046102 ENSOMYG00000046149 lipia (ENSOMYG00000046158) ENSOMYG00000046173 ENSOMYG00000046182 ENSOMYG00000062890 ENSOMYG00000046191 ENSOMYG00000046261 ENSOMYG00000046451 ENSOMYG00000061963 prdx4 (ENSOMYG00000046477) sat1a.2 (ENSOMYG00000046499) ##22 apooa (ENSOMYG00000046512) ENSOMYG00000046534 ENSOMYG00000046539 zgc:153704 (ENSOMYG00000046553) ENSOMYG00000049093 ENSOMYG00000075578 ENSOMYG00000062831 ENSOMYG00000046568 ENSOMYG00000046574 ENSOMYG00000046593 ENSOMYG00000046614 ENSOMYG00000046622 mtif3 (ENSOMYG00000046628) ENSOMYG00000046632 abhd10a (ENSOMYG00000046638) Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00940000163831.f.a ENSGT00940000156040.f.a ENSGT00940000160633.a.b.c ENSGT00940000155053.c.b.a ENSGT00390000004986.f ENSGT00940000159028.j ENSGT00940000164655 ENSGT00870000136493.c ENSGT00940000156285.`c ENSGT00410000026585.b ENSGT00950000182941.b.b.b.a.d.a ENSGT00390000008256.vd.a.b ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ##22 ENSGT00530000063666.b.db.g ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.i ENSGT01050000244868.c.b.d ENSGT01010000223723.b ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ENSGT00550000074787.d.a.b.a ENSGT00940000157443.d.a.a ENSGT00950000182962.a.a.c.a ENSGT00390000014424.i ENSGT00940000156043.fb.a ENSGT00390000017765.a.c Coho salmon MODERN SPECIES 20 pdk3b (ENSOKIG00005048521) pcyt1bb (ENSOKIG00005048497) ARX (ENSOKIG00005048492) ENSOKIG00005048490 ENSOKIG00005048487 ccdc82 (ENSOKIG00005048477) poglut3 (ENSOKIG00005048418) ENSOKIG00005048247 lipia (ENSOKIG00005048194) ENSOKIG00005048187 map7d2a (ENSOKIG00005048175) eif1axa (ENSOKIG00005048152) RPS6KA3 (ENSOKIG00005045963) pdha1a (ENSOKIG00005045792) prdx4 (ENSOKIG00005045718) sat1a.2 (ENSOKIG00005045694) ##22 apooa (ENSOKIG00005045648) ENSOKIG00005045637 ENSOKIG00005045632 zgc:153704 (ENSOKIG00005045615) ENSOKIG00005045605 ENSOKIG00005045601 ZDHHC23 (ENSOKIG00005045595) ATP6V1A (ENSOKIG00005045458) ENSOKIG00005045430 ENSOKIG00005045427 ENSOKIG00005045413 mtif3 (ENSOKIG00005045400) abhd10a (ENSOKIG00005045369) ENSOKIG00005045354 ENSOKIG00005045348 Chinook salmon MODERN SPECIES 23 pcyt1bb (ENSOTSG00005008551) ENSOTSG00005008552 ARX (ENSOTSG00005008553) ENSOTSG00005008555 ccdc82 (ENSOTSG00005008557) ENSOTSG00005008559 poglut3 (ENSOTSG00005008560) ENSOTSG00005008571 ENSOTSG00005009555 lipia (ENSOTSG00005009556) si:ch211-114c12.2 (ENSOTSG00005009558) eif1axa (ENSOTSG00005009559) rps6ka3b (ENSOTSG00005009564) pdha1a (ENSOTSG00005009954) prdx4 (ENSOTSG00005009977) sat1a.2 (ENSOTSG00005009983) ##22 apooa (ENSOTSG00005009986) CXorf58 (ENSOTSG00005009988) ENSOTSG00005009990 zgc:153704 (ENSOTSG00005009991) ENSOTSG00005009992 cst14b.1 (ENSOTSG00005009993) ENSOTSG00005009994 ZDHHC23 (ENSOTSG00005009997) ATP6V1A (ENSOTSG00005009998) ENSOTSG00005010050 WASF3 (ENSOTSG00005010052) mtif3 (ENSOTSG00005010054) ENSOTSG00005010055 abhd10a (ENSOTSG00005010057) ENSOTSG00005010060 Salmo ANCESTRAL SPECIES 18 ENSGT00940000156040.f.a ENSGT00940000160633.a.b.c ENSGT00940000155053.c.b.a ENSGT00390000004986.f ENSGT00960000187413 ENSGT00940000159028.j ENSGT00940000164655 ENSGT00870000136493.c ENSGT00940000156285.`c ENSGT00410000026585.b ENSGT00950000182941.b.b.b.a.d.a ENSGT00390000008256.vd.b.a.b ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ##22 ENSGT00530000063666.b.db.g ENSGT00940000167353 ENSGT00940000164731.i ENSGT01050000244868.c.b.d ENSGT01010000223723 ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ENSGT00550000074787.d.a.b.a ENSGT00940000157443.d.a.a ENSGT00950000182962.a.a.c.a ENSGT00390000014424.i ENSGT00940000156043.fb.a ENSGT00390000017765.a.c ENSGT00940000159385.e.b Atlantic salmon MODERN SPECIES 23 ARX (ENSSSAG00000001808) ENSSSAG00000001806 ccd82 (ENSSSAG00000001805) ENSSSAG00000095586 poglut3 (ENSSSAG00000093555) ENSSSAG00000001762 ENSSSAG00000001722 lipia (ENSSSAG00000001715) ENSSSAG00000001701 map7d2a (ENSSSAG00000001683) IF1AX (ENSSSAG00000001669) RPS6KA3 (ENSSSAG00000001260) ENSSSAG00000110485 pdha1a (ENSSSAG00000000891) prdx4 (ENSSSAG00000000827) sat1 (ENSSSAG00000000816) ##22 ENSSSAG00000000794 apooa (ENSSSAG00000000804) ENSSSAG00000089798 LIPO (ENSSSAG00000000779) ENSSSAG00000004282 cst14b.1 (ENSSSAG00000000759) ENSSSAG00000000752 ENSSSAG00000000746 ENSSSAG00000000691 ENSSSAG00000000669 wasf3 (ENSSSAG00000000656) mtif3 (ENSSSAG00000000645) ENSSSAG00000000638 abhd10a (ENSSSAG00000000623) ENSSSAG00000000604 River trout MODERN SPECIES 10 ENSSTUG00000004413 pdk3b (ENSSTUG00000004513) pcyt1bb (ENSSTUG00000004573) ARX (ENSSTUG00000004586) ENSSTUG00000004595 ccdc82 (ENSSTUG00000004615) ENSSTUG00000004625 ENSSTUG00000004658 ENSSTUG00000004942 lipia (ENSSTUG00000004959) si:ch211-114c12.2 (ENSSTUG00000004961) ENSSTUG00000004974 RPS6KA3 (ENSSTUG00000005081) prdx4 (ENSSTUG00000006186) pdha1a (ENSSTUG00000006251) sat1a.2 (ENSSTUG00000006418) ##22 apooa (ENSSTUG00000006457) ENSSTUG00000006545 ENSSTUG00000006552 ENSSTUG00000006558 zgc:153704 (ENSSTUG00000006566) ENSSTUG00000006593 ENSSTUG00000006600 ENSSTUG00000006609 zdhhc23a (ENSSTUG00000006620) ATP6V1A (ENSSTUG00000006639) ENSSTUG00000006875 ENSSTUG00000006884 mtif3 (ENSSTUG00000006915) ENSSTUG00000006920 abhd10a (ENSSTUG00000006931) Huchen MODERN SPECIES 263 ARX (ENSHHUG00000049184) ENSHHUG00000049199 ccdc82 (ENSHHUG00000049203) ENSHHUG00000049211 ENSHHUG00000049222 lipia (ENSHHUG00000049229) ENSHHUG00000049231 si:ch211-114c12.2 (ENSHHUG00000049241) ENSHHUG00000049244 ENSHHUG00000049249 ENSHHUG00000049253 ENSHHUG00000049255 rps6ka3b (ENSHHUG00000049279) pdha1a (ENSHHUG00000050295) prdx4 (ENSHHUG00000050428) sat1a.2 (ENSHHUG00000050488) ##22 apooa (ENSHHUG00000050512) ENSHHUG00000050519 ENSHHUG00000050521 zgc:153704 (ENSHHUG00000050524) Salmoninae ANCESTRAL SPECIES 156 ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.a.a ENSGT00950000182941.b.b.b.a.d.b.b ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ##22 ENSGT00530000063666.b.db.h ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT01010000225766 ENSGT00940000156558.a.b.b ENSGT00550000074787.d.a.b.b ENSGT00940000157443.d.a.b ENSGT00950000182962.a.a.c.b ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d ENSGT00940000159385.e.a ENSGT00940000153322.B.d.b.d ENSGT00940000164978.b.d Huchen MODERN SPECIES 1542 lipia (ENSHHUG00000032179) si:ch211-114c12.2 (ENSHHUG00000032218) ENSHHUG00000032228 ENSHHUG00000032233 eif1axa (ENSHHUG00000032245) RPS6KA3 (ENSHHUG00000032411) pdha1a (ENSHHUG00000033718) prdx4 (ENSHHUG00000033768) sat1a.2 (ENSHHUG00000033862) ##22 apooa (ENSHHUG00000033890) ENSHHUG00000033915 zgc:153704 (ENSHHUG00000033952) ENSHHUG00000033967 ZDHHC23 (ENSHHUG00000033976) ATP6V1A (ENSHHUG00000033987) ENSHHUG00000034051 WASF3 (ENSHHUG00000034052) gtf3aa (ENSHHUG00000034069) mtif3 (ENSHHUG00000034079) Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00940000153716.A.l.a ENSGT00940000163831.f.b ENSGT00940000156040.f.b ENSGT00940000160633.a.b.d ENSGT00940000155053.c.b.b ENSGT00390000004986.e ENSGT00940000159028.i ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.a.a ENSGT00950000182941.b.b.b.a.d.b.b ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ##22 ENSGT00530000063666.b.db.h ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT00940000156558.a.b.b ENSGT00550000074787.d.a.b.b ENSGT00940000157443.d.a.b ENSGT00950000182962.a.a.c.b ENSGT01100000265679 ENSGT00990000208548 ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d ENSGT00940000159385.e.a ENSGT00940000153322.B.d.b.d Salmo ANCESTRAL SPECIES 1 ENSGT00530000063529.A.f.b ENSGT00940000153716.A.l.a ENSGT00940000163831.f.b ENSGT00940000156040.f.b ENSGT00940000160633.a.b.d ENSGT00940000155053.c.b.b ENSGT00390000004986.e ENSGT00940000159028.i ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.a.a ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ##22 ENSGT00530000063666.b.db.h ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT00990000214106 ENSGT01010000225766 ENSGT00940000156558.a.b.b ENSGT00550000074787.d.a.b.b ENSGT00940000157443.d.a.b ENSGT00950000182962.a.a.c.b ENSGT01100000265679 ENSGT00990000208548 ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d River trout MODERN SPECIES 3 ENSSTUG00000042568 pcyt1bb (ENSSTUG00000042576) ARX (ENSSTUG00000042610) ENSSTUG00000042613 ccdc82 (ENSSTUG00000042622) poglut3 (ENSSTUG00000042684) lipia (ENSSTUG00000042805) ENSSTUG00000042994 si:ch211-114c12.2 (ENSSTUG00000042998) map7d2a (ENSSTUG00000043021) ENSSTUG00000043071 eif1axa (ENSSTUG00000043090) RPS6KA3 (ENSSTUG00000043357) pdha1a (ENSSTUG00000047190) prdx4 (ENSSTUG00000047727) sat1a.2 (ENSSTUG00000047743) ##22 apooa (ENSSTUG00000047753) ENSSTUG00000047838 ENSSTUG00000047841 zgc:153704 (ENSSTUG00000047848) ENSSTUG00000047884 ENSSTUG00000047893 ZDHHC23 (ENSSTUG00000047902) ATP6V1A (ENSSTUG00000047912) ENSSTUG00000047947 WASF3 (ENSSTUG00000047954) ENSSTUG00000047969 ENSSTUG00000047980 gtf3aa (ENSSTUG00000047984) mtif3 (ENSSTUG00000048009) ENSSTUG00000048017 Atlantic salmon MODERN SPECIES 2 ENSSSAG00000077954 ENSSSAG00000077973 zdhhc20a (ENSSSAG00000077981) ENSSSAG00000001912 ENSSSAG00000078007 ENSSSAG00000110707 ENSSSAG00000113571 ENSSSAG00000111407 liph (ENSSSAG00000078034) ENSSSAG00000107832 ENSSSAG00000113546 ENSSSAG00000078668 ENSSSAG00000078711 ENSSSAG00000078097 prdx4 (ENSSSAG00000079055) SAT1 (ENSSSAG00000004180) ##22 apooa (ENSSSAG00000004216) ENSSSAG00000104043 LIPO (ENSSSAG00000004300) ENSSSAG00000004334 ENSSSAG00000004351 ENSSSAG00000004368 ENSSSAG00000004419 ENSSSAG00000004437 ENSSSAG00000004453 gtf3aa (ENSSSAG00000004473) mtif3 (ENSSSAG00000004479) ENSSSAG00000004488 abhd10a (ENSSSAG00000121960) ENSSSAG00000111616 si:ch211-271b14.1 (ENSSSAG00000004538) Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00530000063529.A.f.b ENSGT00940000153716.A.l.a ENSGT00940000163831.f.b ENSGT00940000156040.f.b ENSGT00940000160633.a.b.d ENSGT00940000155053.c.b.b ENSGT00390000004986.e ENSGT00940000159028.i ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.b ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ##22 ENSGT01000000220985 ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT00940000156558.a.b.b ENSGT00550000074787.d.a.b.b ENSGT00940000157443.d.a.b ENSGT00950000182962.a.a.c.b ENSGT01100000265679 ENSGT00990000208548 ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d ENSGT00940000159385.e.a ENSGT00940000153322.B.d.b.d Rainbow trout MODERN SPECIES 364 ENSOMYG00000045002 pcyt1bb (ENSOMYG00000045009) ENSOMYG00000045011 ENSOMYG00000045013 ccdc82 (ENSOMYG00000045020) ENSOMYG00000045028 ENSOMYG00000058284 ENSOMYG00000045031 ENSOMYG00000045045 ENSOMYG00000062398 ENSOMYG00000059861 ENSOMYG00000045061 ENSOMYG00000045445 ENSOMYG00000047174 prdx4 (ENSOMYG00000047262) sat1a.2 (ENSOMYG00000047281) ##22 ENSOMYG00000047283 ENSOMYG00000047287 cpi1 (ENSOMYG00000047292) ENSOMYG00000065609 ENSOMYG00000047295 ENSOMYG00000047313 ENSOMYG00000061723 ENSOMYG00000047324 ENSOMYG00000073889 gtf3aa (ENSOMYG00000047332) ENSOMYG00000047338 abhd10a (ENSOMYG00000073441) ENSOMYG00000050600 ENSOMYG00000047343 si:ch211-271b14.1 (ENSOMYG00000047346) Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00530000063529.A.f.b ENSGT00940000153716.A.l.a ENSGT00940000163831.f.b ENSGT00940000156040.f.b ENSGT00940000160633.a.b.d ENSGT00940000155053.c.b.b ENSGT00390000004986.e ENSGT00940000159028.i ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.b ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ##22 ENSGT01000000220985 ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT00940000156558.a.b.b ENSGT00550000074787.d.a.b.b ENSGT00940000157443.d.a.b ENSGT00950000182962.a.a.c.b ENSGT01100000265679 ENSGT00990000208548 ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d ENSGT00940000159385.e.a ENSGT00940000153322.B.d.b.d Chinook salmon MODERN SPECIES 26 ENSOTSG00005047123 ENSOTSG00005047122 zdhhc20a (ENSOTSG00005047082) ENSOTSG00005047080 pcyt1bb (ENSOTSG00005047079) ARX (ENSOTSG00005047078) ENSOTSG00005047077 ccdc82 (ENSOTSG00005047076) poglut3 (ENSOTSG00005047074) lipia (ENSOTSG00005047072) si:ch211-114c12.2 (ENSOTSG00005047071) eif1axa (ENSOTSG00005047069) ENSOTSG00005041602 pdha1a (ENSOTSG00005039201) prdx4 (ENSOTSG00005039157) sat1a.2 (ENSOTSG00005039134) ##22 ENSOTSG00005039132 ENSOTSG00005039129 zgc:153704 (ENSOTSG00005039127) zdhhc23a (ENSOTSG00005039124) ATP6V1A (ENSOTSG00005039067) ENSOTSG00005039065 ENSOTSG00005039063 ENSOTSG00005039062 GABRB3 (ENSOTSG00005039061) ENSOTSG00005039060 KCNA10 (ENSOTSG00005039057) ENSOTSG00005039056 ENSOTSG00005039054 gtf3aa (ENSOTSG00005039049) ENSOTSG00005039046 Coho salmon MODERN SPECIES 21 ENSOKIG00005047563 zdhhc20a (ENSOKIG00005047316) ENSOKIG00005047282 pcyt1bb (ENSOKIG00005047268) ARX (ENSOKIG00005047263) ENSOKIG00005047261 ccdc82 (ENSOKIG00005047248) poglut3 (ENSOKIG00005047223) LIPH (ENSOKIG00005047196) si:ch211-114c12.2 (ENSOKIG00005047179) map7d2a (ENSOKIG00005047166) eif1axa (ENSOKIG00005047158) RPS6KA3 (ENSOKIG00005040075) pdha1a (ENSOKIG00005038589) prdx4 (ENSOKIG00005038438) sat1a.2 (ENSOKIG00005038406) ##22 ENSOKIG00005038382 ENSOKIG00005038372 ENSOKIG00005038347 zdhhc23a (ENSOKIG00005038336) ATP6V1A (ENSOKIG00005038291) ENSOKIG00005038279 ENSOKIG00005038260 ENSOKIG00005049539 ENSOKIG00005049534 ENSOKIG00005049532 ENSOKIG00005049529 ENSOKIG00005049527 GTF3A (ENSOKIG00005049517) ENSOKIG00005049510 abhd10a (ENSOKIG00005049497) Northern pike MODERN SPECIES 6 ARX (ENSELUG00000020748) ENSELUG00000020759 ccdc82 (ENSELUG00000020768) ENSELUG00000020782 poglut3 (ENSELUG00000020802) ENSELUG00000031481 ENSELUG00000020928 ENSELUG00000020964 lipia (ENSELUG00000020969) si:ch211-114c12.2 (ENSELUG00000020973) map7d2a (ENSELUG00000020985) IF1AX (ENSELUG00000027786) RPS6KA3 (ENSELUG00000021143) pdha1a (ENSELUG00000021178) prdx4 (ENSELUG00000021240) sat1a.2 (ENSELUG00000021271) ##22 apooa (ENSELUG00000028327) ENSELUG00000021334 ENSELUG00000021341 zgc:153704 (ENSELUG00000021361) ENSELUG00000021414 ZDHHC23 (ENSELUG00000021421) ATP6V1A (ENSELUG00000021440) ENSELUG00000026117 ENSELUG00000021472 gtf3aa (ENSELUG00000021503) mtif3 (ENSELUG00000021487) ENSELUG00000000941 abhd10a (ENSELUG00000021523) ENSELUG00000021532 ENSELUG00000021549 Acanthomorphata ANCESTRAL SPECIES 150 ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00940000177567 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.f ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000158617 Euacanthomorphacea ANCESTRAL SPECIES 20 ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00940000177567 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000178850 ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 ENSGT00940000158617 Percomorphaceae ANCESTRAL SPECIES 9 ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00940000177567 ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000178850 ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Ovalentaria ANCESTRAL SPECIES 11 ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Atherinomorphae ANCESTRAL SPECIES 14 ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Cyprinodontiformes ANCESTRAL SPECIES 11 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Aplocheiloidei ANCESTRAL SPECIES 23 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000178850 ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Turquoise killifish MODERN SPECIES 1620 SMS (ENSNFUG00015023442) ENSNFUG00015023467 ENSNFUG00015023472 Nfu_g_1_005297 (ENSNFUG00015023473) ENSNFUG00015023477 ENSNFUG00015023479 ENSNFUG00015023487 ENSNFUG00015023491 zdhhc20a (ENSNFUG00015023497) pcyt1bb (ENSNFUG00015023503) lipia (ENSNFUG00015023506) si:ch211-114c12.2 (ENSNFUG00015023507) ENSNFUG00015023510 pdha1a (ENSNFUG00015023533) prdx4 (ENSNFUG00015023747) sat1a.2 (ENSNFUG00015023760) ##22 ZFX (ENSNFUG00015023762) ZDHHC23A (ENSNFUG00015023765) ATP6V1A (ENSNFUG00015023769) GSX1 (ENSNFUG00015023772) ENSNFUG00015004730 ENSNFUG00015004741 B4GALT4 (ENSNFUG00015004747) ENSNFUG00015004755 CASR (ENSNFUG00015004766) KIF20A (ENSNFUG00015004800) GFRA3 (ENSNFUG00015004922) SLC25A6 (ENSNFUG00015004935) zbtb20 (ENSNFUG00015004957) DLG4 (ENSNFUG00015005156) ephb4a (ENSNFUG00015005893) Mangrove rivulus MODERN SPECIES 42 sms (ENSKMAG00000018618) ENSKMAG00000018561 gabrr3a (ENSKMAG00000018544) ENSKMAG00000018510 ENSKMAG00000018487 ENSKMAG00000018472 ENSKMAG00000018462 ENSKMAG00000018450 ENSKMAG00000018434 pcyt1bb (ENSKMAG00000018415) LIPH (ENSKMAG00000018389) si:ch211-114c12.2 (ENSKMAG00000018367) ENSKMAG00000018346 pdha1a (ENSKMAG00000018296) prdx4 (ENSKMAG00000018258) sat1a.2 (ENSKMAG00000018237) ##22 ENSKMAG00000018225 zgc:153704 (ENSKMAG00000018188) zdhhc23a (ENSKMAG00000018164) ATP6V1A (ENSKMAG00000018112) ENSKMAG00000018069 gsx1 (ENSKMAG00000018048) ENSKMAG00000018038 ENSKMAG00000018015 CASR (ENSKMAG00000017975) zgc:175280 (ENSKMAG00000017918) kif20a (ENSKMAG00000017888) cdc23 (ENSKMAG00000017835) Cyprinodontoidei ANCESTRAL SPECIES 5 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Poeciliinae ANCESTRAL SPECIES 17 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000175409 ENSGT00940000163250.A.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Poecilia ANCESTRAL SPECIES 7 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000175409 ENSGT00940000163250.A.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b NAME_6 ANCESTRAL SPECIES 1 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000175409 ENSGT00940000163250.A.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Amazon molly MODERN SPECIES 255 ENSPFOG00000019241 gabrr3a (ENSPFOG00000019245) ENSPFOG00000019250 ENSPFOG00000023073 ENSPFOG00000019251 ENSPFOG00000019254 ENSPFOG00000022976 ENSPFOG00000019263 ENSPFOG00000019267 pcyt1bb (ENSPFOG00000019271) lipia (ENSPFOG00000019276) ENSPFOG00000019280 ENSPFOG00000019281 pdha1a (ENSPFOG00000019289) prdx4 (ENSPFOG00000019300) sat1a.2 (ENSPFOG00000019303) ##22 ENSPFOG00000019306 zgc:153704 (ENSPFOG00000024718) zdhhc23a (ENSPFOG00000019309) ATP6V1A (ENSPFOG00000019313) ENSPFOG00000019318 ENSPFOG00000019323 gsx1 (ENSPFOG00000019324) ENSPFOG00000019327 b4galt4 (ENSPFOG00000019331) CASR (ENSPFOG00000019334) zgc:175280 (ENSPFOG00000019339) kif20a (ENSPFOG00000019347) cdc23 (ENSPFOG00000019353) ENSPFOG00000019369 slc25a5 (ENSPFOG00000019373) Sailfin molly MODERN SPECIES 30 gabrr3a (ENSPLAG00000000721) ENSPLAG00000007961 ENSPLAG00000007927 ENSPLAG00000007910 ENSPLAG00000007892 ENSPLAG00000007885 ENSPLAG00000007874 ENSPLAG00000007862 ENSPLAG00000007823 pcyt1bb (ENSPLAG00000007765) lipia (ENSPLAG00000007740) ENSPLAG00000007675 ENSPLAG00000007664 pdha1a (ENSPLAG00000007620) prdx4 (ENSPLAG00000007614) sat1a.2 (ENSPLAG00000007586) ##22 ENSPLAG00000007008 zgc:153704 (ENSPLAG00000006995) zdhhc23a (ENSPLAG00000006921) ATP6V1A (ENSPLAG00000006901) ENSPLAG00000006854 gsx1 (ENSPLAG00000006847) ENSPLAG00000006827 Guppy MODERN SPECIES 444 gabrr3a (ENSPREG00000019809) ENSPREG00000019824 ENSPREG00000019850 ENSPREG00000019854 ENSPREG00000019863 ENSPREG00000019869 lipia (ENSPREG00000019875) ENSPREG00000019892 ENSPREG00000019909 pcyt1bb (ENSPREG00000019924) ENSPREG00000019945 ENSPREG00000019959 ENSPREG00000019983 pdha1a (ENSPREG00000020018) prdx4 (ENSPREG00000020038) sat1a.2 (ENSPREG00000020103) ##22 zgc:153704 (ENSPREG00000020444) zdhhc23a (ENSPREG00000020475) ATP6V1A (ENSPREG00000020483) ENSPREG00000020511 ENSPREG00000020526 gsx1 (ENSPREG00000020538) ENSPREG00000020545 ENSPREG00000020550 b4galt4 (ENSPREG00000020565) CASR (ENSPREG00000020592) aifm1 (ENSPREG00000020714) ENSPREG00000020769 amer1 (ENSPREG00000020786) ZC3H12B (ENSPREG00000020794) msna (ENSPREG00000020812) Platyfish MODERN SPECIES 2 ENSXMAG00000011343 gabrr3a (ENSXMAG00000023172) ENSXMAG00000013100 ENSXMAG00000013098 ENSXMAG00000025514 ENSXMAG00000021897 ENSXMAG00000013090 ENSXMAG00000013076 ENSXMAG00000013074 pcyt1bb (ENSXMAG00000013065) lipia (ENSXMAG00000013055) ENSXMAG00000013053 map7d2a (ENSXMAG00000013047) pdha1a (ENSXMAG00000013025) prdx4 (ENSXMAG00000013013) sat1a.2 (ENSXMAG00000012998) ##22 ENSXMAG00000012994 zdhhc23a (ENSXMAG00000012989) ATP6V1A (ENSXMAG00000012982) ENSXMAG00000011611 ENSXMAG00000012980 ENSXMAG00000012978 b4galt4 (ENSXMAG00000012973) CASR (ENSXMAG00000012971) zgc:175280 (ENSXMAG00000012958) kif20a (ENSXMAG00000012940) cdc23 (ENSXMAG00000028922) ENSXMAG00000012915 slc25a5 (ENSXMAG00000020938) zbtb20 (ENSXMAG00000012908) DLG4 (ENSXMAG00000012882) NAME_4 ANCESTRAL SPECIES 5 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731.h ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 ENSGT00940000158617 Mummichog MODERN SPECIES 693 ENSFHEG00000015498 gabrr3a (ENSFHEG00000015478) ENSFHEG00000015450 ENSFHEG00000015429 ENSFHEG00000015417 ENSFHEG00000015402 ENSFHEG00000015397 ENSFHEG00000015387 pcyt1bb (ENSFHEG00000015373) lipia (ENSFHEG00000015352) ENSFHEG00000015307 ENSFHEG00000015299 ENSFHEG00000015293 pdha1a (ENSFHEG00000015263) prdx4 (ENSFHEG00000015259) sat1a.2 (ENSFHEG00000015215) ##22 ENSFHEG00000015210 zdhhc23a (ENSFHEG00000015191) ATP6V1A (ENSFHEG00000015170) ENSFHEG00000015150 ENSFHEG00000015125 gsx1 (ENSFHEG00000015114) ENSFHEG00000015102 ENSFHEG00000015094 CASR (ENSFHEG00000015075) zgc:175280 (ENSFHEG00000014818) kif20a (ENSFHEG00000014776) cdc23 (ENSFHEG00000014759) ENSFHEG00000014699 slc25a5 (ENSFHEG00000014680) zbtb20 (ENSFHEG00000014650) Sheepshead minnow MODERN SPECIES 1846 pdha1a (ENSCVAG00000018203) prdx4 (ENSCVAG00000018211) sat1a.2 (ENSCVAG00000018221) ##22 ENSCVAG00000018233 zgc:153704 (ENSCVAG00000018243) ZDHHC23 (ENSCVAG00000018264) ATP6V1A (ENSCVAG00000018353) Ovalentaria_B ANCESTRAL SPECIES 16 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Cichlidae ANCESTRAL SPECIES 4 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b.b ENSGT01050000244868.c.b.a ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Pseudocrenilabrinae ANCESTRAL SPECIES 14 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l.g ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Pseudocrenilabrinae_A ANCESTRAL SPECIES 21 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l.g ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Haplochromini ANCESTRAL SPECIES 8 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l.g ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Burton s mouthbrooder MODERN SPECIES 316 ENSHBUG00000021201 ENSHBUG00000021206 ENSHBUG00000021239 ENSHBUG00000021258 pcyt1bb (ENSHBUG00000021299) lipia (ENSHBUG00000021316) ENSHBUG00000021328 si:ch211-114c12.2 (ENSHBUG00000021339) map7d2a (ENSHBUG00000021357) pdha1a (ENSHBUG00000021401) prdx4 (ENSHBUG00000000661) sat1a.2 (ENSHBUG00000021459) ##22 ENSHBUG00000021473 zgc:153704 (ENSHBUG00000021480) zgc:153704 (ENSHBUG00000021535) ATP6V1A (ENSHBUG00000000666) ENSHBUG00000021571 ENSHBUG00000021585 gsx1 (ENSHBUG00000021594) ENSHBUG00000021606 ENSHBUG00000021621 b4galt4 (ENSHBUG00000021627) CASR (ENSHBUG00000021647) zgc:175280 (ENSHBUG00000021656) kif20a (ENSHBUG00000021672) cdc23 (ENSHBUG00000021740) ENSHBUG00000021756 Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l.g ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000176877.a.a.b ENSGT00940000156931 P. nyererei MODERN SPECIES 359 sms (ENSPNYG00000014145) ENSPNYG00000014195 gabrr3a (ENSPNYG00000014222) ENSPNYG00000014242 ENSPNYG00000014252 ENSPNYG00000014265 ENSPNYG00000014281 ENSPNYG00000014293 ENSPNYG00000014324 pcyt1bb (ENSPNYG00000014353) lipia (ENSPNYG00000014394) si:ch211-114c12.2 (ENSPNYG00000014431) ENSPNYG00000014450 pdha1a (ENSPNYG00000014473) prdx4 (ENSPNYG00000014516) sat1a.2 (ENSPNYG00000014534) ##22 ENSPNYG00000014545 zgc:153704 (ENSPNYG00000014561) zgc:153704 (ENSPNYG00000014578) zdhhc23a (ENSPNYG00000014639) ATP6V1A (ENSPNYG00000014738) ENSPNYG00000014817 gsx1 (ENSPNYG00000014873) ENSPNYG00000014892 ENSPNYG00000014906 b4galt4 (ENSPNYG00000014923) CASR (ENSPNYG00000014966) zgc:175280 (ENSPNYG00000015150) ENSPNYG00000015194 kif20a (ENSPNYG00000015214) cdc23 (ENSPNYG00000015257) Haplochromini_B ANCESTRAL SPECIES 26 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l.g ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000176877.a.a.b ENSGT00940000156931 Eastern happy MODERN SPECIES 1 sms (ENSACLG00000019104) ENSACLG00000019054 gabrr3a (ENSACLG00000018998) ENSACLG00000018951 ENSACLG00000018932 ENSACLG00000018921 ENSACLG00000018920 ENSACLG00000018886 ENSACLG00000018808 pcyt1bb (ENSACLG00000018767) lipia (ENSACLG00000018742) si:ch211-114c12.2 (ENSACLG00000018719) map7d2a (ENSACLG00000018680) pdha1a (ENSACLG00000018627) prdx4 (ENSACLG00000018585) sat1a.2 (ENSACLG00000018570) ##22 ENSACLG00000018550 ENSACLG00000018527 zgc:153704 (ENSACLG00000018513) zgc:153704 (ENSACLG00000018503) zdhhc23a (ENSACLG00000018489) ATP6V1A (ENSACLG00000018400) ENSACLG00000018366 ENSACLG00000018332 gsx1 (ENSACLG00000018323) ENSACLG00000018286 ENSACLG00000018269 b4galt4 (ENSACLG00000018259) CASR (ENSACLG00000018246) zgc:175280 (ENSACLG00000018154) ENSACLG00000018119 Zebra mbuna MODERN SPECIES 1092 ENSMZEG00005018497 ENSMZEG00005018493 gabrr3a (ENSMZEG00005018491) ENSMZEG00005018486 ENSMZEG00005018482 ENSMZEG00005018475 ENSMZEG00005018471 ENSMZEG00005018469 ENSMZEG00005018460 pcyt1bb (ENSMZEG00005018447) lipia (ENSMZEG00005018433) si:ch211-114c12.2 (ENSMZEG00005018427) map7d2a (ENSMZEG00005018420) pdha1a (ENSMZEG00005018412) prdx4 (ENSMZEG00005018405) sat1a.2 (ENSMZEG00005018402) ##22 ENSMZEG00005018392 zgc:153704 (ENSMZEG00005018387) zgc:153704 (ENSMZEG00005018384) ZDHHC23 (ENSMZEG00005018383) ENSMZEG00005018377 ZDHHC23 (ENSMZEG00005018373) ATP6V1A (ENSMZEG00005018360) ENSMZEG00005018353 gsx1 (ENSMZEG00005018350) ENSMZEG00005018346 b4galt4 (ENSMZEG00005018344) CASR (ENSMZEG00005017168) zgc:175280 (ENSMZEG00005017124) kif20a (ENSMZEG00005017113) cdc23 (ENSMZEG00005017099) Lyretail cichlid MODERN SPECIES 378 prdx4 (ENSNBRG00000022391) sat1a.2 (ENSNBRG00000022371) ##22 ENSNBRG00000022323 zgc:153704 (ENSNBRG00000022312) zgc:153704 (ENSNBRG00000022294) zdhhc23a (ENSNBRG00000022282) ATP6V1A (ENSNBRG00000022257) ENSNBRG00000022177 gsx1 (ENSNBRG00000022162) ENSNBRG00000022153 ENSNBRG00000022141 b4galt4 (ENSNBRG00000022133) CASR (ENSNBRG00000022021) ENSNBRG00000021971 zgc:175280 (ENSNBRG00000021916) kif20a (ENSNBRG00000021876) cdc23 (ENSNBRG00000021843) Nile tilapia MODERN SPECIES 1 sms (ENSONIG00000005102) ENSONIG00000005105 gabrr3a (ENSONIG00000005108) ENSONIG00000005109 ENSONIG00000005110 ENSONIG00000036817 ENSONIG00000005113 ENSONIG00000005117 pcyt1bb (ENSONIG00000005126) lipia (ENSONIG00000005129) si:ch211-114c12.2 (ENSONIG00000005136) ENSONIG00000027365 ENSONIG00000005138 pdha1a (ENSONIG00000005140) prdx4 (ENSONIG00000005145) sat1a.2 (ENSONIG00000035625) ##22 ENSONIG00000043207 ENSONIG00000029108 zgc:153704 (ENSONIG00000041602) zgc:153704 (ENSONIG00000005151) zdhhc23a (ENSONIG00000005152) ATP6V1A (ENSONIG00000005153) ENSONIG00000005158 ENSONIG00000005160 gsx1 (ENSONIG00000005163) ENSONIG00000005164 b4galt4 (ENSONIG00000005167) CASR (ENSONIG00000005168) zgc:175280 (ENSONIG00000005172) kif20a (ENSONIG00000005177) ENSONIG00000037585 Midas cichlid MODERN SPECIES 888 sms (ENSACIG00000002629) ENSACIG00000002611 gabrr3a (ENSACIG00000002584) ENSACIG00000002560 ENSACIG00000002555 ENSACIG00000002536 ENSACIG00000002523 ENSACIG00000002495 ENSACIG00000002469 pcyt1bb (ENSACIG00000002420) lipia (ENSACIG00000002397) si:ch211-114c12.2 (ENSACIG00000002374) ENSACIG00000002366 pdha1a (ENSACIG00000002343) prdx4 (ENSACIG00000002324) sat1a.2 (ENSACIG00000002087) ##22 ENSACIG00000002038 zgc:153704 (ENSACIG00000001818) zgc:153704 (ENSACIG00000001585) zgc:153704 (ENSACIG00000001404) zgc:153704 (ENSACIG00000001381) ZDHHC23 (ENSACIG00000001340) ATP6V1A (ENSACIG00000001309) ENSACIG00000001283 ENSACIG00000001273 gsx1 (ENSACIG00000001245) ENSACIG00000001232 b4galt4 (ENSACIG00000001214) CASR (ENSACIG00000001191) zgc:175280 (ENSACIG00000001095) kif20a (ENSACIG00000001045) Pomacentridae ANCESTRAL SPECIES 10 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Pomacentridae_A ANCESTRAL SPECIES 3 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Amphiprion ANCESTRAL SPECIES 3 ENSGT00940000157181 ENSGT00390000016213 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Clown anemonefish MODERN SPECIES 1379 ENSAOCG00000023917 ENSAOCG00000023886 pcyt1bb (ENSAOCG00000023869) lipia (ENSAOCG00000023856) ENSAOCG00000023841 map7d2a (ENSAOCG00000023830) pdha1a (ENSAOCG00000023806) prdx4 (ENSAOCG00000023779) sat1a.2 (ENSAOCG00000023762) ##22 ENSAOCG00000001732 zgc:153704 (ENSAOCG00000023715) Orange clownfish MODERN SPECIES 6 RYR1 (ENSAPEG00000024341) sms (ENSAPEG00000024395) ENSAPEG00000024399 gabrr3a (ENSAPEG00000024405) ENSAPEG00000024411 ENSAPEG00000024414 ENSAPEG00000024422 ENSAPEG00000024429 ENSAPEG00000024437 pcyt1bb (ENSAPEG00000024445) lipia (ENSAPEG00000024452) ENSAPEG00000024464 map7d2a (ENSAPEG00000024471) pdha1a (ENSAPEG00000024477) prdx4 (ENSAPEG00000024495) sat1a.2 (ENSAPEG00000024500) ##22 ENSAPEG00000024509 zgc:153704 (ENSAPEG00000024513) ZDHHC23 (ENSAPEG00000024521) ATP6V1A (ENSAPEG00000024526) ENSAPEG00000024532 gsx1 (ENSAPEG00000024536) ENSAPEG00000024539 ENSAPEG00000024542 b4galt4 (ENSAPEG00000000316) CASR (ENSAPEG00000000343) zgc:175280 (ENSAPEG00000000390) kif20a (ENSAPEG00000000528) cdc23 (ENSAPEG00000000605) ENSAPEG00000000633 slc25a5 (ENSAPEG00000000725) Spiny chromis MODERN SPECIES 87 sms (ENSAPOG00000007654) ENSAPOG00000007573 gabrr3a (ENSAPOG00000007548) ENSAPOG00000007497 ENSAPOG00000007487 ENSAPOG00000007473 ENSAPOG00000007460 ENSAPOG00000007431 ENSAPOG00000007337 pcyt1bb (ENSAPOG00000007268) lipia (ENSAPOG00000007208) ENSAPOG00000007195 map7d2a (ENSAPOG00000007171) pdha1a (ENSAPOG00000007131) prdx4 (ENSAPOG00000007077) sat1a.2 (ENSAPOG00000007028) ##22 ENSAPOG00000006989 zgc:153704 (ENSAPOG00000006968) ZDHHC23 (ENSAPOG00000006939) ATP6V1A (ENSAPOG00000006922) ENSAPOG00000006857 gsx1 (ENSAPOG00000006823) ARHGAP31 (ENSAPOG00000006810) ENSAPOG00000006796 b4galt4 (ENSAPOG00000006778) CASR (ENSAPOG00000006738) zgc:175280 (ENSAPOG00000006459) kif20a (ENSAPOG00000006379) cdc23 (ENSAPOG00000006290) ENSAPOG00000006231 slc25a5 (ENSAPOG00000006216) Bicolor damselfish MODERN SPECIES 303 ENSSPAG00000003188 pcyt1bb (ENSSPAG00000003157) lipia (ENSSPAG00000003124) si:ch211-114c12.2 (ENSSPAG00000003103) pdha1a (ENSSPAG00000003053) prdx4 (ENSSPAG00000003032) sat1a.2 (ENSSPAG00000003021) ##22 ENSSPAG00000002994 ENSSPAG00000002967 ZDHHC23 (ENSSPAG00000002941) ATP6V1A (ENSSPAG00000002871) ENSSPAG00000002775 gsx1 (ENSSPAG00000002754) ENSSPAG00000002737 b4galt4 (ENSSPAG00000002731) CASR (ENSSPAG00000002702) zgc:175280 (ENSSPAG00000002654) kif20a (ENSSPAG00000002610) cdc23 (ENSSPAG00000002552) ENSSPAG00000002519 slc25a5 (ENSSPAG00000002476) zbtb20 (ENSSPAG00000002466) Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Eupercaria ANCESTRAL SPECIES 17 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Eupecaria_A ANCESTRAL SPECIES 17 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Eupecaria_B ANCESTRAL SPECIES 17 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 ENSGT00940000158617 Perciformes ANCESTRAL SPECIES 22 ENSGT00390000006852.A ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 ENSGT00940000158617 Perciformes_a ANCESTRAL SPECIES 20 ENSGT00390000016213 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 ENSGT00940000158617 Pike perch MODERN SPECIES 37 ENSSLUG00000005699 sms (ENSSLUG00000005578) ENSSLUG00000005531 gabrr3a (ENSSLUG00000005513) ENSSLUG00000023241 ENSSLUG00000023236 ENSSLUG00000023231 ENSSLUG00000023224 ENSSLUG00000023212 pcyt1bb (ENSSLUG00000023201) lipia (ENSSLUG00000023169) si:ch211-114c12.2 (ENSSLUG00000023161) ENSSLUG00000023154 pdha1a (ENSSLUG00000022834) prdx4 (ENSSLUG00000022735) sat1a.2 (ENSSLUG00000022712) ##22 ENSSLUG00000022702 zgc:153704 (ENSSLUG00000022651) zdhhc23a (ENSSLUG00000022640) ATP6V1A (ENSSLUG00000022635) ENSSLUG00000022628 ENSSLUG00000022622 ENSSLUG00000022613 b4galt4 (ENSSLUG00000022606) CASR (ENSSLUG00000022588) zgc:175280 (ENSSLUG00000022542) kif20a (ENSSLUG00000022502) cdc23 (ENSSLUG00000022463) ENSSLUG00000022451 slc25a5 (ENSSLUG00000022443) zbtb20 (ENSSLUG00000022441) Channel bull blenny MODERN SPECIES 5 ENSCGOG00000003381 sms (ENSCGOG00000003324) ENSCGOG00000003312 gabrr3a (ENSCGOG00000003311) ENSCGOG00000003309 ENSCGOG00000003306 ENSCGOG00000003304 ENSCGOG00000003293 ENSCGOG00000003268 pcyt1bb (ENSCGOG00000003215) lipia (ENSCGOG00000003125) si:ch211-114c12.2 (ENSCGOG00000003117) map7d2a (ENSCGOG00000003114) pdha1a (ENSCGOG00000002172) prdx4 (ENSCGOG00000001975) sat1a.2 (ENSCGOG00000001948) ##22 ENSCGOG00000001943 zgc:153704 (ENSCGOG00000001941) ZDHHC23 (ENSCGOG00000001938) ATP6V1A (ENSCGOG00000001652) ENSCGOG00000001603 ENSCGOG00000023910 ENSCGOG00000023909 ENSCGOG00000023908 b4galt4 (ENSCGOG00000023906) CASR (ENSCGOG00000023900) zgc:175280 (ENSCGOG00000023892) kif20a (ENSCGOG00000023879) cdc23 (ENSCGOG00000023850) ENSCGOG00000023810 slc25a6 (ENSCGOG00000023776) Eupecaria_C ANCESTRAL SPECIES 15 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000158617 ENSGT00940000157956.o.b ENSGT00940000166305.B Gilthead seabream MODERN SPECIES 4 ENSSAUG00010001976 gabrr3a (ENSSAUG00010001963) ENSSAUG00010001960 ENSSAUG00010001959 ENSSAUG00010001955 ENSSAUG00010001953 ENSSAUG00010001950 ENSSAUG00010001941 pcyt1bb (ENSSAUG00010001939) lipia (ENSSAUG00010001929) ENSSAUG00010001924 ENSSAUG00010001921 ENSSAUG00010001915 pdha1a (ENSSAUG00010001900) prdx4 (ENSSAUG00010001878) sat1a.2 (ENSSAUG00010001871) ##22 ENSSAUG00010001861 zgc:153704 (ENSSAUG00010001857) ZDHHC23 (ENSSAUG00010001853) ATP6V1A (ENSSAUG00010001843) ENSSAUG00010001841 ENSSAUG00010001837 ENSSAUG00010001831 b4galt4 (ENSSAUG00010001823) CASR (ENSSAUG00010001814) zgc:175280 (ENSSAUG00010001799) kif20a (ENSSAUG00010001529) cdc23 (ENSSAUG00010026651) ENSSAUG00010026649 SLC25A5 (ENSSAUG00010026647) zbtb20 (ENSSAUG00010026646) Ballan wrasse MODERN SPECIES 56 ENSLBEG00000004370 gabrr3a (ENSLBEG00000004339) ENSLBEG00000004300 ENSLBEG00000004272 ENSLBEG00000004256 ENSLBEG00000004246 ENSLBEG00000004191 ENSLBEG00000004137 pcyt1bb (ENSLBEG00000004091) lipia (ENSLBEG00000004058) ENSLBEG00000004042 ENSLBEG00000004018 map7d2a (ENSLBEG00000003963) pdha1a (ENSLBEG00000003915) prdx4 (ENSLBEG00000003897) sat1a.2 (ENSLBEG00000003879) ##22 ENSLBEG00000003858 zgc:153704 (ENSLBEG00000003768) ZDHHC23 (ENSLBEG00000003742) ATP6V1A (ENSLBEG00000003686) ENSLBEG00000003642 gsx1 (ENSLBEG00000003628) ENSLBEG00000003615 b4galt4 (ENSLBEG00000003593) CASR (ENSLBEG00000003570) zgc:175280 (ENSLBEG00000003521) kif20a (ENSLBEG00000003479) cdc23 (ENSLBEG00000003397) ENSLBEG00000003363 slc25a5 (ENSLBEG00000003333) zbtb20 (ENSLBEG00000003299) Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Anabantaria ANCESTRAL SPECIES 13 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Anabantoidei ANCESTRAL SPECIES 12 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Climbing perch MODERN SPECIES 5 nfrkb (ENSATEG00000019611) ENSATEG00000019555 ENSATEG00000019523 ENSATEG00000019493 gabrr3a (ENSATEG00000019371) ENSATEG00000019343 ENSATEG00000019334 ENSATEG00000019308 ENSATEG00000019278 ENSATEG00000019259 ENSATEG00000019079 ENSATEG00000019015 ENSATEG00000018994 ENSATEG00000018976 prdx4 (ENSATEG00000017856) sat1a.2 (ENSATEG00000018967) ##22 ENSATEG00000017726 zgc:153704 (ENSATEG00000017711) ENSATEG00000017690 ENSATEG00000017610 ENSATEG00000017583 ENSATEG00000017572 ENSATEG00000028248 b4galt4 (ENSATEG00000017523) ENSATEG00000017377 zgc:175280 (ENSATEG00000017297) KIF20A (ENSATEG00000017266) ENSATEG00000017213 ENSATEG00000017157 ENSATEG00000017131 ENSATEG00000017117 Siamese fighting fish MODERN SPECIES 5 nfrkb (ENSBSLG00000026641) ENSBSLG00000026638 sms (ENSBSLG00000026637) ENSBSLG00000026636 gabrr3a (ENSBSLG00000026635) ENSBSLG00000026634 ENSBSLG00000026631 ENSBSLG00000026630 ENSBSLG00000026620 pcyt1bb (ENSBSLG00000026617) lipia (ENSBSLG00000026611) si:ch211-114c12.2 (ENSBSLG00000026603) map7d2a (ENSBSLG00000026586) ENSBSLG00000026511 prdx4 (ENSBSLG00000026407) sat1a.2 (ENSBSLG00000026341) ##22 ENSBSLG00000026302 zgc:153704 (ENSBSLG00000026194) ZDHHC23 (ENSBSLG00000026161) atp6v1aa (ENSBSLG00000026089) ENSBSLG00000026037 gsx1 (ENSBSLG00000025990) ENSBSLG00000025937 ENSBSLG00000025936 b4galt4 (ENSBSLG00000025935) CASR (ENSBSLG00000025934) zgc:175280 (ENSBSLG00000025933) kif20a (ENSBSLG00000025932) cdc23 (ENSBSLG00000025929) ENSBSLG00000025928 zbtb20 (ENSBSLG00000025927) Zig-zag eel MODERN SPECIES 5 ENSMAMG00000018038 ENSMAMG00000018026 gabrr3a (ENSMAMG00000018005) ENSMAMG00000017989 ENSMAMG00000026403 ENSMAMG00000027839 ENSMAMG00000017953 ENSMAMG00000017881 ENSMAMG00000017868 ENSMAMG00000017828 ENSMAMG00000017816 ENSMAMG00000017809 ENSMAMG00000017796 ENSMAMG00000017764 prdx4 (ENSMAMG00000017739) sat1a.2 (ENSMAMG00000017726) ##22 ENSMAMG00000017720 zgc:153704 (ENSMAMG00000017708) ENSMAMG00000017690 ENSMAMG00000017654 ENSMAMG00000017618 ENSMAMG00000017611 ENSMAMG00000026946 b4galt4 (ENSMAMG00000017595) ENSMAMG00000017580 zgc:175280 (ENSMAMG00000017561) KIF20A (ENSMAMG00000017548) ENSMAMG00000017506 ENSMAMG00000026984 ENSMAMG00000017476 ENSMAMG00000017456 Carangaria ANCESTRAL SPECIES 16 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Carangaria_A ANCESTRAL SPECIES 8 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154622.a.b.m Seriola ANCESTRAL SPECIES 2 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154622.a.b.m ENSGT00940000158617 Greater amberjack MODERN SPECIES 139 sms (ENSSDUG00000005853) ENSSDUG00000005896 gabrr3a (ENSSDUG00000005971) ENSSDUG00000006000 ENSSDUG00000006010 ENSSDUG00000006020 ENSSDUG00000006027 ENSSDUG00000006042 ENSSDUG00000006114 pcyt1bb (ENSSDUG00000006146) lipia (ENSSDUG00000006175) ENSSDUG00000006197 ENSSDUG00000006220 pdha1a (ENSSDUG00000006245) prdx4 (ENSSDUG00000006312) sat1a.2 (ENSSDUG00000006376) ##22 ENSSDUG00000006831 zgc:153704 (ENSSDUG00000006853) zdhhc23a (ENSSDUG00000006861) ATP6V1A (ENSSDUG00000006881) ENSSDUG00000006920 ENSSDUG00000006944 ENSSDUG00000006959 b4galt4 (ENSSDUG00000006975) CASR (ENSSDUG00000006989) zgc:175280 (ENSSDUG00000007014) kif20a (ENSSDUG00000007080) cdc23 (ENSSDUG00000007107) ENSSDUG00000007156 ENSSDUG00000007174 zbtb20 (ENSSDUG00000007188) Yellowtail amberjack MODERN SPECIES 3035 sms (ENSSLDG00000018844) ENSSLDG00000018877 gabrr3a (ENSSLDG00000018944) ENSSLDG00000018972 ENSSLDG00000018986 ENSSLDG00000018995 ENSSLDG00000019003 ENSSLDG00000019018 ENSSLDG00000019065 pcyt1bb (ENSSLDG00000019097) lipia (ENSSLDG00000019132) si:ch211-114c12.2 (ENSSLDG00000019149) map7d2a (ENSSLDG00000019166) pdha1a (ENSSLDG00000019215) prdx4 (ENSSLDG00000019265) sat1a.2 (ENSSLDG00000019305) ##22 ENSSLDG00000019535 zgc:153704 (ENSSLDG00000019547) zdhhc23a (ENSSLDG00000019570) ATP6V1A (ENSSLDG00000019592) ENSSLDG00000019626 gsx1 (ENSSLDG00000019661) ENSSLDG00000019672 b4galt4 (ENSSLDG00000019681) CASR (ENSSLDG00000019692) zgc:175280 (ENSSLDG00000019714) kif20a (ENSSLDG00000019720) cdc23 (ENSSLDG00000019752) ENSSLDG00000019788 ENSSLDG00000019804 zbtb20 (ENSSLDG00000019822) Barramundi perch MODERN SPECIES 94 ENSLCAG00010007994 gabrr3a (ENSLCAG00010007980) ENSLCAG00010007967 ENSLCAG00010007965 ENSLCAG00010007960 ENSLCAG00010007955 ENSLCAG00010007946 ENSLCAG00010007774 pcyt1bb (ENSLCAG00010007727) lipia (ENSLCAG00010007724) ENSLCAG00010007722 si:ch211-114c12.2 (ENSLCAG00010007718) ENSLCAG00010007711 pdha1a (ENSLCAG00010007561) prdx4 (ENSLCAG00010007442) sat1a.2 (ENSLCAG00010007387) ##22 ENSLCAG00010007376 zgc:153704 (ENSLCAG00010007370) ENSLCAG00010007368 zdhhc23a (ENSLCAG00010007363) ATP6V1A (ENSLCAG00010007340) ENSLCAG00010007307 gsx1 (ENSLCAG00010007297) ENSLCAG00010007293 ENSLCAG00010007289 b4galt4 (ENSLCAG00010007287) CASR (ENSLCAG00010007265) zgc:175280 (ENSLCAG00010006873) kif20a (ENSLCAG00010006765) cdc23 (ENSLCAG00010006697) ENSLCAG00010006663 Pleuronectoidei ANCESTRAL SPECIES 23 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a ENSGT00530000063174.a.l ENSGT00940000153430.a.a ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154400 Turbot MODERN SPECIES 16 ENSSMAG00000012121 gabrr3a (ENSSMAG00000012145) ENSSMAG00000012168 ENSSMAG00000012186 ENSSMAG00000012194 ENSSMAG00000024630 ENSSMAG00000029591 ENSSMAG00000012208 ENSSMAG00000012238 ENSSMAG00000012292 ENSSMAG00000012308 ENSSMAG00000012336 ENSSMAG00000012353 ENSSMAG00000012399 prdx4 (ENSSMAG00000012439) sat1a.2 (ENSSMAG00000028221) ##22 ENSSMAG00000012476 zgc:153704 (ENSSMAG00000012487) ENSSMAG00000012496 ENSSMAG00000012526 ENSSMAG00000012555 ENSSMAG00000012630 ENSSMAG00000012641 b4galt4 (ENSSMAG00000012659) ENSSMAG00000012665 zgc:175280 (ENSSMAG00000012677) KIF20A (ENSSMAG00000012711) ENSSMAG00000012742 ENSSMAG00000012828 ENSSMAG00000012861 ENSSMAG00000012883 Tongue sole MODERN SPECIES 10 tpst1l (ENSCSEG00000018769) asl (ENSCSEG00000018789) crcp (ENSCSEG00000018814) ca4c (ENSCSEG00000018817) aldh3a2b (ENSCSEG00000018826) ENSCSEG00000018838 vtnb (ENSCSEG00000018842) cryba1b (ENSCSEG00000018863) trarg1b (ENSCSEG00000018884) pcyt1bb (ENSCSEG00000018888) lipia (ENSCSEG00000018900) ENSCSEG00000018912 ENSCSEG00000018928 pdha1a (ENSCSEG00000018951) prdx4 (ENSCSEG00000018975) sat1a.2 (ENSCSEG00000018995) ##22 ENSCSEG00000019105 zgc:153704 (ENSCSEG00000019108) ZDHHC23 (ENSCSEG00000019112) ATP6V1A (ENSCSEG00000019118) ENSCSEG00000019129 slc7a3a (ENSCSEG00000019132) snx12 (ENSCSEG00000019147) ENSCSEG00000019156 slc9a6b (ENSCSEG00000019164) exosc8 (ENSCSEG00000019201) SUPT20H (ENSCSEG00000019177) ugt5d1 (ENSCSEG00000019213) ugt5d1 (ENSCSEG00000019234) POSTN (ENSCSEG00000019240) trpc4a (ENSCSEG00000019268) Tiger tail seahorse MODERN SPECIES 214 ENSHCOG00000020322 gabrr3a (ENSHCOG00000020336) ENSHCOG00000000544 ENSHCOG00000020350 ENSHCOG00000020360 ENSHCOG00000020380 ENSHCOG00000020405 pcyt1bb (ENSHCOG00000020434) lipia (ENSHCOG00000020444) si:ch211-114c12.2 (ENSHCOG00000020456) pdha1a (ENSHCOG00000020485) ENSHCOG00000020742 ENSHCOG00000020773 ENSHCOG00000020784 prdx4 (ENSHCOG00000020811) sat1a.2 (ENSHCOG00000020844) ##22 ENSHCOG00000020900 zgc:153704 (ENSHCOG00000020922) zdhhc23a (ENSHCOG00000020942) ATP6V1A (ENSHCOG00000020971) ENSHCOG00000020973 gsx1 (ENSHCOG00000021013) ENSHCOG00000021019 ENSHCOG00000001294 b4galt4 (ENSHCOG00000001297) CASR (ENSHCOG00000001304) CASR (ENSHCOG00000001307) zgc:175280 (ENSHCOG00000001352) cdc23 (ENSHCOG00000001380) ENSHCOG00000001386 slc25a5 (ENSHCOG00000001394) Pinecone sodierfish MODERN SPECIES 5 katnal2 (ENSMMDG00005010214) ENSMMDG00005010212 ENSMMDG00005010211 ENSMMDG00005010210 ENSMMDG00005010208 ENSMMDG00005010207 ENSMMDG00005010202 ENSMMDG00005010199 pcyt1bb (ENSMMDG00005010196) lipia (ENSMMDG00005010193) si:ch211-114c12.2 (ENSMMDG00005010190) ENSMMDG00005010189 pdha1a (ENSMMDG00005008199) pdha1a (ENSMMDG00005008006) prdx4 (ENSMMDG00005007963) sat1a.2 (ENSMMDG00005007960) ##22 ENSMMDG00005007955 zgc:153704 (ENSMMDG00005007943) zdhhc23a (ENSMMDG00005007940) ATP6V1A (ENSMMDG00005007605) ENSMMDG00005007578 ENSMMDG00005007573 ENSMMDG00005007570 b4galt4 (ENSMMDG00005007567) CASR (ENSMMDG00005007564) zgc:175280 (ENSMMDG00005007489) kif20a (ENSMMDG00005007483) cdc23 (ENSMMDG00005007473) ENSMMDG00005007468 slc25a5 (ENSMMDG00005007466) zbtb20 (ENSMMDG00005007464) Cod MODERN SPECIES 20 ENSGMOG00000000912 ENSGMOG00000002123 ENSGMOG00000002145 gabrr3a (ENSGMOG00000014262) ENSGMOG00000026928 ENSGMOG00000024330 ENSGMOG00000024025 ENSGMOG00000029199 ENSGMOG00000002240 ENSGMOG00000002261 ENSGMOG00000002276 ENSGMOG00000002297 ENSGMOG00000030680 ENSGMOG00000002378 prdx4 (ENSGMOG00000002394) sat1a.2 (ENSGMOG00000025474) ##22 ENSGMOG00000023676 zgc:153704 (ENSGMOG00000002433) ENSGMOG00000002452 ENSGMOG00000002483 ENSGMOG00000002508 ENSGMOG00000023452 ENSGMOG00000033627 b4galt4 (ENSGMOG00000002654) ENSGMOG00000002672 zgc:175280 (ENSGMOG00000002684) KIF20A (ENSGMOG00000002724) ENSGMOG00000002777 ENSGMOG00000002813 ENSGMOG00000024094 ENSGMOG00000036964 Osteoglossiformes ANCESTRAL SPECIES 203 ENSGT01100000263825 ENSGT00940000156371.e.b ENSGT00940000162182.d ENSGT00940000153716.A.m ENSGT00940000163831.g.a ENSGT01030000234646.B.a.b.bb ENSGT00940000156040.f ENSGT00940000160633.c.b ENSGT00390000004986 ENSGT00940000159028 ENSGT00940000164655 ENSGT00870000136493.c ENSGT00940000156285 ENSGT00940000159370.a ENSGT00530000063174.a.l ENSGT00950000183121.b.b.b.b.x ##22 ENSGT00530000063666.b.db ENSGT00940000164731.e ENSGT01050000244868 ENSGT00940000154826 ENSGT00390000014424 ENSGT00390000001504.d Asian bonytongue MODERN SPECIES 18 pcyt1bb (ENSSFOG00015012860) ARX (ENSSFOG00015012891) ccdc82 (ENSSFOG00015012931) poglut3 (ENSSFOG00015012938) ENSSFOG00015012999 ENSSFOG00015013138 lipia (ENSSFOG00015013156) MAP7D2 (ENSSFOG00015013180) ENSSFOG00015013214 ENSSFOG00015025700 ENSSFOG00015031058 RPS6KA3 (ENSSFOG00015013306) pld6 (ENSSFOG00015013389) pdha1a (ENSSFOG00015013412) sat1b (ENSSFOG00015028647) ##22 sat1a.2 (ENSSFOG00015013511) ##22 apooa (ENSSFOG00015013529) klhl15 (ENSSFOG00015013554) ENSSFOG00015013578 ptgdsb.1 (ENSSFOG00015013652) cst14a.1 (ENSSFOG00015013664) ENSSFOG00015029480 ENSSFOG00015029601 ENSSFOG00015013695 pan3 (ENSSFOG00015013716) ENSSFOG00015013788 clec14a (ENSSFOG00015013793) sec23a (ENSSFOG00015013820) srp54 (ENSSFOG00015013920) zgc:109986 (ENSSFOG00015013998) BAZ1A (ENSSFOG00015014035) P. kingsleyae MODERN SPECIES 323 ENSPKIG00000019493 PLCXD2 (ENSPKIG00000019482) ENSPKIG00000019456 slc51a (ENSPKIG00000019420) pcyt1bb (ENSPKIG00000019378) ARX (ENSPKIG00000019352) ccdc82 (ENSPKIG00000019291) poglut3 (ENSPKIG00000019239) ENSPKIG00000019201 ENSPKIG00000019177 lipia (ENSPKIG00000019149) MAP7D2 (ENSPKIG00000019101) ENSPKIG00000019062 RPS6KA3 (ENSPKIG00000019006) pdha1a (ENSPKIG00000018960) sat1a.2 (ENSPKIG00000018924) ##22 ENSPKIG00000018826 ENSPKIG00000018747 cst14a.1 (ENSPKIG00000018715) ENSPKIG00000018693 mtif3 (ENSPKIG00000018672) ENSPKIG00000018655 pan3 (ENSPKIG00000018576) ENSPKIG00000018545 ENSPKIG00000018532 Spotted gar MODERN SPECIES 669 phex (ENSLOCG00000003780) sms (ENSLOCG00000003761) mbtps2 (ENSLOCG00000003747) smpx (ENSLOCG00000003737) KLHL34 (ENSLOCG00000003725) CNKSR2 (ENSLOCG00000003669) rps6ka3a (ENSLOCG00000003638) eif1axa (ENSLOCG00000003622) MAP7D2 (ENSLOCG00000003609) ENSLOCG00000003591 SH3KBP1 (ENSLOCG00000003567) MAP3K15 (ENSLOCG00000003527) pdha1b (ENSLOCG00000003508) prdx4 (ENSLOCG00000003488) acot9.2 (ENSLOCG00000003460) sat1a.2 (ENSLOCG00000003427) ##22 apooa (ENSLOCG00000003411) ENSLOCG00000003394 klhl15 (ENSLOCG00000003383) eif2s3 (ENSLOCG00000003369) ENSLOCG00000003347 zgc:153704 (ENSLOCG00000003328) c8g (ENSLOCG00000003306) KPNA1 (ENSLOCG00000003272) fam162a (ENSLOCG00000003258) mix23 (ENSLOCG00000003236) CSTB (ENSLOCG00000003223) ENSLOCG00000003211 ENSLOCG00000003195 drd3 (ENSLOCG00000003166) qtrt2 (ENSLOCG00000003146) Reedfish MODERN SPECIES 12 ENSECRG00000007088 SH3KBP1 (ENSECRG00000006955) BCLAF3 (ENSECRG00000006913) MAP7D2 (ENSECRG00000006666) eif1axa (ENSECRG00000006607) rps6ka3a (ENSECRG00000006272) CNKSR2 (ENSECRG00000006154) KLHL34 (ENSECRG00000006129) smpx (ENSECRG00000006111) mbtps2 (ENSECRG00000006093) sms (ENSECRG00000006084) phex (ENSECRG00000006068) ENSECRG00000006057 prdx4 (ENSECRG00000006048) acot9.2 (ENSECRG00000006020) sat1a.2 (ENSECRG00000005999) ##22 apooa (ENSECRG00000005991) ENSECRG00000005985 klhl15 (ENSECRG00000005980) eif2s3 (ENSECRG00000005958) ENSECRG00000005936 slc51a (ENSECRG00000005925) ENSECRG00000005913 pdk3b (ENSECRG00000005893) pcyt1bb (ENSECRG00000005877) pola1 (ENSECRG00000005843) arxa (ENSECRG00000005823) hgd (ENSECRG00000005792) ndufb4 (ENSECRG00000005773) ENSECRG00000005765 ENSECRG00000005759 Elephant shark MODERN SPECIES 1666 sat1a.2 (ENSCMIG00000005943) ##22 WBP4 (ENSCMIG00000005947) ENSCMIG00000005949 ENSCMIG00000005950 MTRF1 (ENSCMIG00000005951) rgcc (ENSCMIG00000005954) vwa8 (ENSCMIG00000005995) DGKH (ENSCMIG00000006217) AKAP11 (ENSCMIG00000006334) ENSCMIG00000006340 DNAJC15 (ENSCMIG00000006344) ENOX1 (ENSCMIG00000006352) wdfy2 (ENSCMIG00000006385) ENSCMIG00000006436 serpine3 (ENSCMIG00000006536) FAM124A (ENSCMIG00000006538) Gnathostomata ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Sauria ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Archelosauria ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Testudinoidea ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Three-toed box turtle MODERN SPECIES 61 TNMD (ENSTMTG00000016200) ENSTMTG00000016182 PCDH19 (ENSTMTG00000016133) DIAPH2 (ENSTMTG00000012608) ENSTMTG00000012181 ENSTMTG00000012165 ENSTMTG00000012133 ENSTMTG00000012113 ENSTMTG00000012088 KLHL4 (ENSTMTG00000011993) DACH2 (ENSTMTG00000011929) ENSTMTG00000011889 POF1B (ENSTMTG00000011849) ZNF711 (ENSTMTG00000011815) ENSTMTG00000011790 ENSTMTG00000011776 ##22 ENSTMTG00000011769 #22 APOOL (ENSTMTG00000011730) ENSTMTG00000011701 HDX (ENSTMTG00000011687) RPS6KA6 (ENSTMTG00000003012) POU3F4 (ENSTMTG00000002563) ENSTMTG00000002553 ENSTMTG00000002532 ENSTMTG00000002524 ENSTMTG00000002522 SH3BGRL (ENSTMTG00000002519) ENSTMTG00000002514 BRWD3 (ENSTMTG00000001842) ENSTMTG00000001676 TENT5D (ENSTMTG00000001666) Archosauria ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Australian saltwater crocodile MODERN SPECIES 36 TNMD (ENSCPRG00005009818) PCDH19 (ENSCPRG00005009823) DIAPH2 (ENSCPRG00005009840) ENSCPRG00005009864 ENSCPRG00005009869 ENSCPRG00005009881 ENSCPRG00005009884 ENSCPRG00005009888 ENSCPRG00005009893 ENSCPRG00005009915 DACH2 (ENSCPRG00005009926) ENSCPRG00005009955 POF1B (ENSCPRG00005009967) ZNF711 (ENSCPRG00005010021) ENSCPRG00005010030 ENSCPRG00005010043 ##22 ENSCPRG00005010046 APOOL (ENSCPRG00005010049) ENSCPRG00005010059 ENSCPRG00005010080 HDX (ENSCPRG00005010091) RPS6KA6 (ENSCPRG00005010212) POU3F4 (ENSCPRG00005010851) ENSCPRG00005010856 ENSCPRG00005010857 ENSCPRG00005010861 ENSCPRG00005010866 ENSCPRG00005010867 SH3BGRL (ENSCPRG00005010868) ENSCPRG00005010871 ENSCPRG00005010876 Anura ANCESTRAL SPECIES ENSGT00950000183121.b.b.a ##22 Frog MODERN SPECIES 8 zdhhc9 (ENSXETG00000040042) utp14a (ENSXETG00000007465) ENSXETG00000045078 pcdh11x (ENSXETG00000002370) ENSXETG00000045422 ENSXETG00000036143 ENSXETG00000017444 klhl4 (ENSXETG00000015861) dach2 (ENSXETG00000015905) chm (ENSXETG00000017820) ENSXETG00000046316 pof1b (ENSXETG00000017818) znf711 (ENSXETG00000017817) ENSXETG00000046191 apool (ENSXETG00000017816) satl1 (ENSXETG00000039007) ##22 ENSXETG00000017815 hdx (ENSXETG00000014523) rps6ka6 (ENSXETG00000014506) pou3f4 (ENSXETG00000014504) XB5726496 [provisional:tmem182] (ENSXETG00000026233) slc9a2l (ENSXETG00000014501) ENSXETG00000042644 sh3bgrl (ENSXETG00000044909) brwd3 (ENSXETG00000022117) ENSXETG00000042317 XB5896658 [provisional:stx3] (ENSXETG00000047005) tent5d (ENSXETG00000044889) chmp1b (ENSXETG00000022122) tbx22 (ENSXETG00000006730) itm2a (ENSXETG00000027280) Gnathostomata ANCESTRAL SPECIES ENSGT00950000183121.b.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183121.b.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183121.b.a ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183121.b.a ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183121.b.a ##22 Mammalia ANCESTRAL SPECIES 58 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00940000165567 ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889 ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a Theria ANCESTRAL SPECIES 32 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889 ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a Eutheria ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a Boreoeutheria ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 Euarchontoglires ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Tree shrew MODERN SPECIES 2024 SAT2 (ENSTBEG00000002627) ##22 Glires ANCESTRAL SPECIES 3 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Lagomorpha ANCESTRAL SPECIES ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00940000153249.b.c ENSGT00930000151033 ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 Rabbit MODERN SPECIES 10 CNTROB (ENSOCUG00000017335) TRAPPC1 (ENSOCUG00000017332) KCNAB3 (ENSOCUG00000017325) RNF227 (ENSOCUG00000017320) CHD3 (ENSOCUG00000029299) CYB5D1 (ENSOCUG00000017288) NAA38 (ENSOCUG00000017284) TMEM88 (ENSOCUG00000017280) KDM6B (ENSOCUG00000017292) DNAH2 (ENSOCUG00000012688) EFNB3 (ENSOCUG00000002822) WRAP53 (ENSOCUG00000025261) TP53 (ENSOCUG00000001138) ATP1B2 (ENSOCUG00000002988) SHBG (ENSOCUG00000002566) ENSOCUG00000002563 ##22 FXR2 (ENSOCUG00000010393) MPDU1 (ENSOCUG00000010389) SOX15 (ENSOCUG00000001100) CD68 (ENSOCUG00000010383) EIF4A1 (ENSOCUG00000010375) SENP3 (ENSOCUG00000017785) TNFSF13 (ENSOCUG00000028216) TNFSF12 (ENSOCUG00000037107) ENSOCUG00000028180 ZBTB4 (ENSOCUG00000007437) CHRNB1 (ENSOCUG00000007433) FGF11 (ENSOCUG00000004215) TMEM102 (ENSOCUG00000004211) SPEM2 (ENSOCUG00000005547) SPEM1 (ENSOCUG00000005542) Pika MODERN SPECIES 1726 DNAH2 (ENSOPRG00000006474) EFNB3 (ENSOPRG00000006463) ENSOPRG00000006449 TP53 (ENSOPRG00000006441) ENSOPRG00000006431 SAT2 (ENSOPRG00000006418) ##22 Rodentia ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Rodentia_B ANCESTRAL SPECIES 1 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Myomorpha ANCESTRAL SPECIES ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Muroidea ANCESTRAL SPECIES ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.a.a ENSGT00940000164775 ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 Cricetidae ANCESTRAL SPECIES ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Cricetinae ANCESTRAL SPECIES ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.b.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a Chinese hamster chok1gshd MODERN SPECIES 229 Trappc1 (ENSCGRG00001022956) Kcnab3 (ENSCGRG00001023295) Rnf227 (ENSCGRG00001005462) Chd3 (ENSCGRG00001011306) ENSCGRG00001023929 Cyb5d1 (ENSCGRG00001015505) Naa38 (ENSCGRG00001016403) Tmem88 (ENSCGRG00001018524) Kdm6b (ENSCGRG00001023895) Dnah2 (ENSCGRG00001023725) Efnb3 (ENSCGRG00001004575) Wrap53 (ENSCGRG00001009844) Trp53 (ENSCGRG00001012952) Atp1b2 (ENSCGRG00001016825) Shbg (ENSCGRG00001024732) Sat2 (ENSCGRG00001024470) ##22 Fxr2 (ENSCGRG00001000488) Sox15 (ENSCGRG00001006850) Lec35 (ENSCGRG00001008612) ENSCGRG00001006775 Eif4a1 (ENSCGRG00001009326) Senp3 (ENSCGRG00001001055) Tnfsf13 (ENSCGRG00001000520) Tnfsf12 (ENSCGRG00001001875) Polr2a (ENSCGRG00001003538) Slc35g3 (ENSCGRG00001010297) Zbtb4 (ENSCGRG00001020458) Chrnb1 (ENSCGRG00001021737) Fgf11 (ENSCGRG00001016734) Tmem102 (ENSCGRG00001018840) ENSCGRG00001022749 Golden Hamster MODERN SPECIES 627 Gucy2e (ENSMAUG00000020496) Cntrob (ENSMAUG00000009950) Trappc1 (ENSMAUG00000005409) Kcnab3 (ENSMAUG00000015147) Rnf227 (ENSMAUG00000014108) Chd3 (ENSMAUG00000013873) Cyb5d1 (ENSMAUG00000020638) Naa38 (ENSMAUG00000020052) Tmem88 (ENSMAUG00000019666) Kdm6b (ENSMAUG00000012974) Dnah2 (ENSMAUG00000010439) Efnb3 (ENSMAUG00000014491) Wrap53 (ENSMAUG00000008952) Tp53 (ENSMAUG00000022241) Atp1b2 (ENSMAUG00000021762) Sat2 (ENSMAUG00000021610) ##22 Fxr2 (ENSMAUG00000002021) Mpdu1 (ENSMAUG00000001160) ENSMAUG00000019191 ENSMAUG00000018508 Senp3 (ENSMAUG00000008104) Tnfsf13 (ENSMAUG00000006919) Tnfsf12 (ENSMAUG00000014380) ENSMAUG00000021055 Zbtb4 (ENSMAUG00000021953) Chrnb1 (ENSMAUG00000020789) Fgf11 (ENSMAUG00000007523) Tmem102 (ENSMAUG00000008694) Spem2 (ENSMAUG00000012929) Spem1 (ENSMAUG00000012060) Nlgn2 (ENSMAUG00000022123) Cricetidae_B ANCESTRAL SPECIES ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.a.a ENSGT00940000164775 ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 Prairie vole MODERN SPECIES 15 Trappc1 (ENSMOCG00000006677) Kcnab3 (ENSMOCG00000020356) Rnf227 (ENSMOCG00000013838) Chd3 (ENSMOCG00000004848) ENSMOCG00000020842 Cyb5d1 (ENSMOCG00000016201) Naa38 (ENSMOCG00000002129) Tmem88 (ENSMOCG00000001201) Kdm6b (ENSMOCG00000009811) Dnah2 (ENSMOCG00000003037) Efnb3 (ENSMOCG00000006928) Wrap53 (ENSMOCG00000015971) Trp53 (ENSMOCG00000020008) Atp1b2 (ENSMOCG00000009972) Shbg (ENSMOCG00000013734) Sat2 (ENSMOCG00000020053) ##22 Fxr2 (ENSMOCG00000019049) Sox15 (ENSMOCG00000001244) ENSMOCG00000019979 Cd68 (ENSMOCG00000011137) Eif4a1 (ENSMOCG00000007064) Senp3 (ENSMOCG00000017728) ENSMOCG00000022801 Polr2a (ENSMOCG00000018279) Slc35g3 (ENSMOCG00000010288) ENSMOCG00000019073 Chrnb1 (ENSMOCG00000022627) Fgf11 (ENSMOCG00000021518) ENSMOCG00000016882 Tmem102 (ENSMOCG00000016206) Spem3 (ENSMOCG00000022965) Northern American deer mouse MODERN SPECIES 21 Cntrob (ENSPEMG00000015583) Trappc1 (ENSPEMG00000010837) Kcnab3 (ENSPEMG00000012211) ENSPEMG00000029356 Chd3 (ENSPEMG00000014262) Cyb5d1 (ENSPEMG00000027957) Naa38 (ENSPEMG00000015014) Tmem88 (ENSPEMG00000025255) Kdm6b (ENSPEMG00000010257) Dnah2 (ENSPEMG00000004906) Efnb3 (ENSPEMG00000029907) Wrap53 (ENSPEMG00000009467) ENSPEMG00000011289 Atp1b2 (ENSPEMG00000009297) Shbg (ENSPEMG00000008069) Sat2 (ENSPEMG00000019261) ##22 Fxr2 (ENSPEMG00000019239) Sox15 (ENSPEMG00000019249) Mpdu1 (ENSPEMG00000019060) ENSPEMG00000012269 Eif4a1 (ENSPEMG00000009100) Senp3 (ENSPEMG00000019189) Tnfsf13 (ENSPEMG00000019217) Tnfsf12 (ENSPEMG00000024526) Polr2a (ENSPEMG00000012521) Slc35g3 (ENSPEMG00000012096) Zbtb4 (ENSPEMG00000030856) Chrnb1 (ENSPEMG00000016983) Fgf11 (ENSPEMG00000026103) Tmem102 (ENSPEMG00000018682) ENSPEMG00000027133 Murinae ANCESTRAL SPECIES 7 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b.b ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.a.a ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 Mus ANCESTRAL SPECIES 2 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Mus_C ANCESTRAL SPECIES 3 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00860000136019 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b.a.a ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0017398 Kcnab3 (MGP_SPRETEiJ_G0017399) Chd3 (MGP_SPRETEiJ_G0017400) MGP_SPRETEiJ_G0017401 MGP_SPRETEiJ_G0017402 MGP_SPRETEiJ_G0017403 Naa38 (MGP_SPRETEiJ_G0017404) Tmem88 (MGP_SPRETEiJ_G0017405) Kdm6b (MGP_SPRETEiJ_G0017406) Dnah2 (MGP_SPRETEiJ_G0017407) Efnb3 (MGP_SPRETEiJ_G0017408) Wrap53 (MGP_SPRETEiJ_G0017409) Trp53 (MGP_SPRETEiJ_G0017410) Atp1b2 (MGP_SPRETEiJ_G0017411) Shbg (MGP_SPRETEiJ_G0017412) Sat2 (MGP_SPRETEiJ_G0017413) ##22 Fxr2 (MGP_SPRETEiJ_G0017414) Sox15 (MGP_SPRETEiJ_G0017415) Mpdu1 (MGP_SPRETEiJ_G0017416) Cd68 (MGP_SPRETEiJ_G0017417) MGP_SPRETEiJ_G0017418 Senp3 (MGP_SPRETEiJ_G0017419) MGP_SPRETEiJ_G0017420 Tnfsf13 (MGP_SPRETEiJ_G0017421) Tnfsf12 (MGP_SPRETEiJ_G0017422) Polr2a (MGP_SPRETEiJ_G0017423) Slc35g3 (MGP_SPRETEiJ_G0017424) Zbtb4 (MGP_SPRETEiJ_G0017425) Chrnb1 (MGP_SPRETEiJ_G0017426) Fgf11 (MGP_SPRETEiJ_G0017427) Tmem102 (MGP_SPRETEiJ_G0017428) Steppe mouse MODERN SPECIES 2607 Cntrob (ENSMSIG00000026477) Trappc1 (ENSMSIG00000026458) Kcnab3 (ENSMSIG00000026433) Rnf227 (ENSMSIG00000026421) Chd3 (ENSMSIG00000026278) Cyb5d1 (ENSMSIG00000026258) Naa38 (ENSMSIG00000026252) Tmem88 (ENSMSIG00000026250) Kdm6b (ENSMSIG00000026234) Dnah2 (ENSMSIG00000026044) Efnb3 (ENSMSIG00000026027) Wrap53 (ENSMSIG00000026006) ENSMSIG00000025886 Atp1b2 (ENSMSIG00000025884) Shbg (ENSMSIG00000025876) ENSMSIG00000025872 ##22 Fxr2 (ENSMSIG00000025838) Sox15 (ENSMSIG00000025831) Mpdu1 (ENSMSIG00000025820) Cd68 (ENSMSIG00000025801) ENSMSIG00000025748 Senp3 (ENSMSIG00000025720) ENSMSIG00000025651 Polr2a (ENSMSIG00000025463) Slc35g3 (ENSMSIG00000025457) Zbtb4 (ENSMSIG00000025449) Chrnb1 (ENSMSIG00000025437) Fgf11 (ENSMSIG00000025425) Tmem102 (ENSMSIG00000025413) Spem3 (ENSMSIG00000025405) Spem2 (ENSMSIG00000025397) Mouse MODERN SPECIES 2 Cntrob (ENSMUSG00000032782) Trappc1 (ENSMUSG00000049299) Kcnab3 (ENSMUSG00000018470) Rnf227 (ENSMUSG00000043419) Chd3 (ENSMUSG00000018474) Cyb5d1 (ENSMUSG00000044795) Naa38 (ENSMUSG00000059278) Tmem88 (ENSMUSG00000045377) Kdm6b (ENSMUSG00000018476) Dnah2 (ENSMUSG00000005237) Efnb3 (ENSMUSG00000003934) Wrap53 (ENSMUSG00000041346) Trp53 (ENSMUSG00000059552) Atp1b2 (ENSMUSG00000041329) Shbg (ENSMUSG00000005202) Sat2 (ENSMUSG00000069835) ##22 Fxr2 (ENSMUSG00000018765) Sox15 (ENSMUSG00000041287) Mpdu1 (ENSMUSG00000018761) Cd68 (ENSMUSG00000018774) Eif4a1 (ENSMUSG00000059796) Senp3 (ENSMUSG00000005204) Tnfsfm13 (ENSMUSG00000018752) Tnfsf13 (ENSMUSG00000089669) Tnfsf12 (ENSMUSG00000097328) Polr2a (ENSMUSG00000005198) Slc35g3 (ENSMUSG00000018776) Zbtb4 (ENSMUSG00000018750) Chrnb1 (ENSMUSG00000041189) Fgf11 (ENSMUSG00000042826) Tmem102 (ENSMUSG00000089876) Ryukyu mouse MODERN SPECIES 2 MGP_CAROLIEiJ_G0016562 Kcnab3 (MGP_CAROLIEiJ_G0016563) Chd3 (MGP_CAROLIEiJ_G0016564) MGP_CAROLIEiJ_G0016565 MGP_CAROLIEiJ_G0016566 MGP_CAROLIEiJ_G0016567 Naa38 (MGP_CAROLIEiJ_G0016568) Tmem88 (MGP_CAROLIEiJ_G0016569) Kdm6b (MGP_CAROLIEiJ_G0016570) Dnah2 (MGP_CAROLIEiJ_G0016571) Efnb3 (MGP_CAROLIEiJ_G0016572) Wrap53 (MGP_CAROLIEiJ_G0016573) Trp53 (MGP_CAROLIEiJ_G0016574) Atp1b2 (MGP_CAROLIEiJ_G0016575) Shbg (MGP_CAROLIEiJ_G0016576) Sat2 (MGP_CAROLIEiJ_G0016577) ##22 Fxr2 (MGP_CAROLIEiJ_G0016578) Sox15 (MGP_CAROLIEiJ_G0016579) Mpdu1 (MGP_CAROLIEiJ_G0016580) Cd68 (MGP_CAROLIEiJ_G0016581) MGP_CAROLIEiJ_G0016582 Senp3 (MGP_CAROLIEiJ_G0016583) MGP_CAROLIEiJ_G0016584 Tnfsf13 (MGP_CAROLIEiJ_G0016585) Tnfsf12 (MGP_CAROLIEiJ_G0016586) Polr2a (MGP_CAROLIEiJ_G0016587) Slc35g3 (MGP_CAROLIEiJ_G0016588) Zbtb4 (MGP_CAROLIEiJ_G0016589) Chrnb1 (MGP_CAROLIEiJ_G0016590) Fgf11 (MGP_CAROLIEiJ_G0016591) Tmem102 (MGP_CAROLIEiJ_G0016592) Shrew mouse MODERN SPECIES 5 Trappc1 (MGP_PahariEiJ_G0017693) Kcnab3 (MGP_PahariEiJ_G0017694) Chd3 (MGP_PahariEiJ_G0017695) MGP_PahariEiJ_G0017696 MGP_PahariEiJ_G0017697 MGP_PahariEiJ_G0017698 Naa38 (MGP_PahariEiJ_G0017699) Tmem88 (MGP_PahariEiJ_G0017700) Kdm6b (MGP_PahariEiJ_G0017701) Dnah2 (MGP_PahariEiJ_G0017702) Efnb3 (MGP_PahariEiJ_G0017703) Wrap53 (MGP_PahariEiJ_G0017704) Trp53 (MGP_PahariEiJ_G0017705) Atp1b2 (MGP_PahariEiJ_G0017706) MGP_PahariEiJ_G0017707 Sat2 (MGP_PahariEiJ_G0017708) ##22 Fxr2 (MGP_PahariEiJ_G0017709) Sox15 (MGP_PahariEiJ_G0017710) Mpdu1 (MGP_PahariEiJ_G0017711) Cd68 (MGP_PahariEiJ_G0017712) MGP_PahariEiJ_G0017713 Senp3 (MGP_PahariEiJ_G0017714) MGP_PahariEiJ_G0017715 Tnfsf13 (MGP_PahariEiJ_G0017716) Tnfsf12 (MGP_PahariEiJ_G0017717) Polr2a (MGP_PahariEiJ_G0017718) Slc35g3 (MGP_PahariEiJ_G0017719) Zbtb4 (MGP_PahariEiJ_G0017720) Chrnb1 (MGP_PahariEiJ_G0017721) Fgf11 (MGP_PahariEiJ_G0017722) Tmem102 (MGP_PahariEiJ_G0017723) Rat MODERN SPECIES 1 Cntrob (ENSRNOG00000008270) Trappc1 (ENSRNOG00000037627) Kcnab3 (ENSRNOG00000008480) Rnf227 (ENSRNOG00000021540) Chd3 (ENSRNOG00000009722) Cyb5d1 (ENSRNOG00000066275) Naa38 (ENSRNOG00000009823) Tmem88 (ENSRNOG00000009870) Kdm6b (ENSRNOG00000037613) Dnah2 (ENSRNOG00000052688) Efnb3 (ENSRNOG00000010320) Wrap53 (ENSRNOG00000010520) Tp53 (ENSRNOG00000010756) Atp1b2 (ENSRNOG00000011227) Shbg (ENSRNOG00000011357) Sat2 (ENSRNOG00000011714) ##22 Fxr2 (ENSRNOG00000011876) Sox15 (ENSRNOG00000012155) Mpdu1 (ENSRNOG00000012162) Cd68 (ENSRNOG00000037563) Eif4a1 (ENSRNOG00000030628) Senp3 (ENSRNOG00000013746) Tnfsf13 (ENSRNOG00000014171) Tnfsf12 (ENSRNOG00000045670) Polr2a (ENSRNOG00000028834) Slc35g3 (ENSRNOG00000014519) Zbtb4 (ENSRNOG00000014689) Chrnb1 (ENSRNOG00000014698) Fgf11 (ENSRNOG00000014882) Tmem102 (ENSRNOG00000015057) ENSRNOG00000064962 Upper Galilee mountains blind mole rat MODERN SPECIES 1746 Cntrob (ENSNGAG00000007283) Trappc1 (ENSNGAG00000024337) Kcnab3 (ENSNGAG00000020938) Rnf227 (ENSNGAG00000021827) Chd3 (ENSNGAG00000000773) ENSNGAG00000012476 Cyb5d1 (ENSNGAG00000017998) Naa38 (ENSNGAG00000019042) Tmem88 (ENSNGAG00000019276) Kdm6b (ENSNGAG00000002609) Dnah2 (ENSNGAG00000015592) Efnb3 (ENSNGAG00000000608) Wrap53 (ENSNGAG00000001849) Tp53 (ENSNGAG00000010608) Atp1b2 (ENSNGAG00000011555) Sat2 (ENSNGAG00000014713) ##22 Fxr2 (ENSNGAG00000016236) Sox15 (ENSNGAG00000001407) Mpdu1 (ENSNGAG00000002289) ENSNGAG00000017735 Eif4a1 (ENSNGAG00000018330) Senp3 (ENSNGAG00000019462) ENSNGAG00000021296 Polr2a (ENSNGAG00000002543) Slc35g3 (ENSNGAG00000015839) Zbtb4 (ENSNGAG00000016971) Chrnb1 (ENSNGAG00000018008) Fgf11 (ENSNGAG00000018287) Tmem102 (ENSNGAG00000018630) Spem3 (ENSNGAG00000019102) Spem2 (ENSNGAG00000020043) Lesser Egyptian jerboa MODERN SPECIES 168 Gucy2e (ENSJJAG00000019441) Cntrob (ENSJJAG00000022253) Trappc1 (ENSJJAG00000000666) Kcnab3 (ENSJJAG00000007965) Chd3 (ENSJJAG00000017633) Cyb5d1 (ENSJJAG00000012580) Naa38 (ENSJJAG00000013236) Tmem88 (ENSJJAG00000013316) ENSJJAG00000014228 Dnah2 (ENSJJAG00000019886) Efnb3 (ENSJJAG00000011348) Wrap53 (ENSJJAG00000011669) Trp53 (ENSJJAG00000012331) Atp1b2 (ENSJJAG00000013283) Shbg (ENSJJAG00000014834) Sat2 (ENSJJAG00000015219) ##22 Fxr2 (ENSJJAG00000016434) Sox15 (ENSJJAG00000016980) Mpdu1 (ENSJJAG00000020318) ENSJJAG00000022204 Eif4a1 (ENSJJAG00000022783) ENSJJAG00000000114 ENSJJAG00000006459 Polr2a (ENSJJAG00000013049) Slc35g3 (ENSJJAG00000015077) ENSJJAG00000015430 Chrnb1 (ENSJJAG00000015708) ENSJJAG00000015954 Tmem102 (ENSJJAG00000016211) Spem2 (ENSJJAG00000016321) Spem1 (ENSJJAG00000016635) Kangaroo rat MODERN SPECIES 338 Cntrob (ENSDORG00000010724) Trappc1 (ENSDORG00000010722) Kcnab3 (ENSDORG00000010720) Rnf227 (ENSDORG00000010719) Chd3 (ENSDORG00000010713) Cyb5d1 (ENSDORG00000023948) Naa38 (ENSDORG00000010169) Tmem88 (ENSDORG00000025174) Kdm6b (ENSDORG00000010167) Dnah2 (ENSDORG00000008370) Efnb3 (ENSDORG00000026303) Wrap53 (ENSDORG00000008488) Trp53 (ENSDORG00000026783) Atp1b2 (ENSDORG00000025939) ENSDORG00000029595 Sat2 (ENSDORG00000029725) ##22 Fxr2 (ENSDORG00000014232) Sox15 (ENSDORG00000014230) Mpdu1 (ENSDORG00000014229) ENSDORG00000014227 Eif4a1 (ENSDORG00000014225) Senp3 (ENSDORG00000014223) ENSDORG00000014221 Polr2a (ENSDORG00000008667) Slc35g3 (ENSDORG00000028094) ENSDORG00000026747 Chrnb1 (ENSDORG00000008663) Fgf11 (ENSDORG00000008661) Tmem102 (ENSDORG00000008659) Spem2 (ENSDORG00000008657) Spem1 (ENSDORG00000008656) Rodentia_A ANCESTRAL SPECIES 3 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Sciuridae ANCESTRAL SPECIES 25 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Marmotini ANCESTRAL SPECIES 42 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Alpin marmot MODERN SPECIES 92 ALOX15B (ENSMMMG00000020089) GUCY2D (ENSMMMG00000020052) CNTROB (ENSMMMG00000020034) TRAPPC1 (ENSMMMG00000020030) KCNAB3 (ENSMMMG00000020007) CHD3 (ENSMMMG00000019936) CYB5D1 (ENSMMMG00000019930) NAA38 (ENSMMMG00000019920) TMEM88 (ENSMMMG00000019917) KDM6B (ENSMMMG00000019902) EFNB3 (ENSMMMG00000019770) WRAP53 (ENSMMMG00000019760) TP53 (ENSMMMG00000019747) ATP1B2 (ENSMMMG00000019742) SHBG (ENSMMMG00000019737) SAT2 (ENSMMMG00000019728) ##22 FXR2 (ENSMMMG00000019720) SOX15 (ENSMMMG00000019717) MPDU1 (ENSMMMG00000019711) CD68 (ENSMMMG00000019708) EIF4A1 (ENSMMMG00000019682) SENP3 (ENSMMMG00000019674) TNFSF13 (ENSMMMG00000019673) TNFSF12 (ENSMMMG00000019660) POLR2A (ENSMMMG00000019616) ENSMMMG00000019610 ZBTB4 (ENSMMMG00000019607) CHRNB1 (ENSMMMG00000019597) FGF11 (ENSMMMG00000019583) ENSMMMG00000019577 SPEM2 (ENSMMMG00000019557) Marmotini_b ANCESTRAL SPECIES 35 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.a ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 Arctic ground squirrel MODERN SPECIES 77 GUCY2D (ENSUPAG00010016071) CNTROB (ENSUPAG00010016016) TRAPPC1 (ENSUPAG00010016002) KCNAB3 (ENSUPAG00010015981) CHD3 (ENSUPAG00010015846) CYB5D1 (ENSUPAG00010015824) NAA38 (ENSUPAG00010015814) TMEM88 (ENSUPAG00010015803) KDM6B (ENSUPAG00010015706) DNAH2 (ENSUPAG00010015485) EFNB3 (ENSUPAG00010015466) WRAP53 (ENSUPAG00010015444) TP53 (ENSUPAG00010015398) ATP1B2 (ENSUPAG00010015380) SHBG (ENSUPAG00010015369) SAT2 (ENSUPAG00010015359) ##22 FXR2 (ENSUPAG00010015345) SOX15 (ENSUPAG00010015340) MPDU1 (ENSUPAG00010015329) CD68 (ENSUPAG00010015311) ENSUPAG00010015286 SENP3 (ENSUPAG00010015274) TNFSF13 (ENSUPAG00010015271) TNFSF12 (ENSUPAG00010015258) POLR2A (ENSUPAG00010015140) ENSUPAG00010015133 ZBTB4 (ENSUPAG00010015112) CHRNB1 (ENSUPAG00010015072) FGF11 (ENSUPAG00010015051) ENSUPAG00010015030 TMEM102 (ENSUPAG00010015024) Squirrel MODERN SPECIES 195 CNTROB (ENSSTOG00000000145) TRAPPC1 (ENSSTOG00000024665) KCNAB3 (ENSSTOG00000000141) RNF227 (ENSSTOG00000026440) CHD3 (ENSSTOG00000025907) CYB5D1 (ENSSTOG00000001060) TMEM88 (ENSSTOG00000001057) NAA38 (ENSSTOG00000025950) KDM6B (ENSSTOG00000019400) DNAH2 (ENSSTOG00000002487) EFNB3 (ENSSTOG00000029036) WRAP53 (ENSSTOG00000002484) TP53 (ENSSTOG00000022774) ATP1B2 (ENSSTOG00000019448) SHBG (ENSSTOG00000029233) SAT2 (ENSSTOG00000005681) ##22 FXR2 (ENSSTOG00000005657) MPDU1 (ENSSTOG00000005636) SOX15 (ENSSTOG00000005654) EIF4A1 (ENSSTOG00000024814) SENP3 (ENSSTOG00000001835) TNFSF13 (ENSSTOG00000034739) TNFSF12 (ENSSTOG00000005614) POLR2A (ENSSTOG00000001304) ENSSTOG00000022540 ENSSTOG00000000346 CHRNB1 (ENSSTOG00000000341) FGF11 (ENSSTOG00000000339) TMEM102 (ENSSTOG00000000338) SPEM3 (ENSSTOG00000033242) SPEM2 (ENSSTOG00000030621) Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005013370 CNTROB (ENSSVLG00005013509) TRAPPC1 (ENSSVLG00005013628) KCNAB3 (ENSSVLG00005013744) RNF227 (ENSSVLG00005013817) CHD3 (ENSSVLG00005013898) CYB5D1 (ENSSVLG00005013988) NAA38 (ENSSVLG00005014059) TMEM88 (ENSSVLG00005014138) KDM6B (ENSSVLG00005014210) EFNB3 (ENSSVLG00005015242) WRAP53 (ENSSVLG00005015335) TP53 (ENSSVLG00005015536) ATP1B2 (ENSSVLG00005015878) SHBG (ENSSVLG00005015979) SAT2 (ENSSVLG00005016345) ##22 FXR2 (ENSSVLG00005016396) SOX15 (ENSSVLG00005016448) MPDU1 (ENSSVLG00005016491) CD68 (ENSSVLG00005016549) EIF4A1 (ENSSVLG00005016680) SENP3 (ENSSVLG00005017018) ENSSVLG00005017113 POLR2A (ENSSVLG00005017374) ENSSVLG00005006468 ZBTB4 (ENSSVLG00005006487) CHRNB1 (ENSSVLG00005006512) ENSSVLG00005006577 TMEM102 (ENSSVLG00005006623) SPEM2 (ENSSVLG00005006720) SPEM1 (ENSSVLG00005006743) Hystricomorpha ANCESTRAL SPECIES 3 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 Hystricomorpha_b ANCESTRAL SPECIES 22 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.a ENSGT00940000153889.e.a.b.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a Degu DUPLICATION Degu MODERN SPECIES 139 CNTROB (ENSODEG00000017795) TRAPPC1 (ENSODEG00000017738) KCNAB3 (ENSODEG00000017706) RNF227 (ENSODEG00000017826) CHD3 (ENSODEG00000017785) CYB5D1 (ENSODEG00000017742) NAA38 (ENSODEG00000017702) TMEM88 (ENSODEG00000017852) KDM6B (ENSODEG00000017794) DNAH2 (ENSODEG00000017776) EFNB3 (ENSODEG00000017671) WRAP53 (ENSODEG00000017648) TP53 (ENSODEG00000017683) ATP1B2 (ENSODEG00000017782) SHBG (ENSODEG00000017630) ENSODEG00000017643 ##22 FXR2 (ENSODEG00000017803) SOX15 (ENSODEG00000017501) MPDU1 (ENSODEG00000017856) CD68 (ENSODEG00000017563) EIF4A1 (ENSODEG00000017512) SENP3 (ENSODEG00000017615) ENSODEG00000017544 POLR2A (ENSODEG00000017674) ENSODEG00000017743 ENSODEG00000017609 CHRNB1 (ENSODEG00000017475) FGF11 (ENSODEG00000017497) TMEM102 (ENSODEG00000017500) SPEM2 (ENSODEG00000017647) SPEM1 (ENSODEG00000017419) Degu MODERN SPECIES 13 ENSODEG00000000006 ##22 Long-tailed chinchilla MODERN SPECIES 174 CNTROB (ENSCLAG00000008419) TRAPPC1 (ENSCLAG00000006633) KCNAB3 (ENSCLAG00000007675) RNF227 (ENSCLAG00000008516) CHD3 (ENSCLAG00000010523) CYB5D1 (ENSCLAG00000016495) NAA38 (ENSCLAG00000015879) TMEM88 (ENSCLAG00000006940) KDM6B (ENSCLAG00000006879) DNAH2 (ENSCLAG00000008437) EFNB3 (ENSCLAG00000008030) ENSCLAG00000008651 TP53 (ENSCLAG00000007189) ATP1B2 (ENSCLAG00000015532) ENSCLAG00000016382 SAT2 (ENSCLAG00000006730) ##22 FXR2 (ENSCLAG00000007322) SOX15 (ENSCLAG00000007796) MPDU1 (ENSCLAG00000009603) CD68 (ENSCLAG00000011317) ENSCLAG00000006786 SENP3 (ENSCLAG00000009353) TNFSF13 (ENSCLAG00000009671) TNFSF12 (ENSCLAG00000008538) POLR2A (ENSCLAG00000012196) ENSCLAG00000009172 ZBTB4 (ENSCLAG00000011122) CHRNB1 (ENSCLAG00000014488) FGF11 (ENSCLAG00000015858) TMEM102 (ENSCLAG00000013876) SPEM2 (ENSCLAG00000008313) Guinea pig MODERN SPECIES 61 CNTROB (ENSCPOG00000007169) TRAPPC1 (ENSCPOG00000031689) KCNAB3 (ENSCPOG00000002028) RNF227 (ENSCPOG00000027016) CHD3 (ENSCPOG00000022653) CYB5D1 (ENSCPOG00000004427) NAA38 (ENSCPOG00000032412) TMEM88 (ENSCPOG00000033148) KDM6B (ENSCPOG00000004414) DNAH2 (ENSCPOG00000004386) EFNB3 (ENSCPOG00000022473) WRAP53 (ENSCPOG00000002599) TP53 (ENSCPOG00000014252) ATP1B2 (ENSCPOG00000034285) SHBG (ENSCPOG00000011310) SAT2 (ENSCPOG00000031404) ##22 FXR2 (ENSCPOG00000023303) MPDU1 (ENSCPOG00000032454) SOX15 (ENSCPOG00000004915) CD68 (ENSCPOG00000004905) EIF4A1 (ENSCPOG00000004900) SENP3 (ENSCPOG00000004897) TNFSF13 (ENSCPOG00000034597) TNFSF12 (ENSCPOG00000004894) POLR2A (ENSCPOG00000014812) ENSCPOG00000014811 ZBTB4 (ENSCPOG00000033470) CHRNB1 (ENSCPOG00000014809) FGF11 (ENSCPOG00000034488) TMEM102 (ENSCPOG00000033790) SPEM2 (ENSCPOG00000023905) Naked mole-rat female MODERN SPECIES 12 ALOXE3 (ENSHGLG00000011148) ALOX12B (ENSHGLG00000019071) ENSHGLG00000049475 CNTROB (ENSHGLG00000016550) TRAPPC1 (ENSHGLG00000035580) KCNAB3 (ENSHGLG00000016886) RNF227 (ENSHGLG00000045551) CHD3 (ENSHGLG00000012017) CYB5D1 (ENSHGLG00000010161) NAA38 (ENSHGLG00000033435) TMEM88 (ENSHGLG00000034924) ENSHGLG00000038949 WRAP53 (ENSHGLG00000014000) Tp53 (ENSHGLG00000038082) ENSHGLG00000011044 ENSHGLG00000042748 ##22 FXR2 (ENSHGLG00000012247) ENSHGLG00000047155 ENSHGLG00000047752 ENSHGLG00000047031 ENSHGLG00000033365 TNFSF13 (ENSHGLG00000010768) TNFSF12 (ENSHGLG00000010122) ENSHGLG00000011091 ENSHGLG00000046218 FGF11 (ENSHGLG00000042024) ENSHGLG00000049999 SPEM2 (ENSHGLG00000009650) NLGN2 (ENSHGLG00000041822) TMEM256 (ENSHGLG00000018691) PLSCR3 (ENSHGLG00000019015) Primates ANCESTRAL SPECIES 3 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 Strepsirrhini ANCESTRAL SPECIES 21 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 Lemuriformes ANCESTRAL SPECIES 33 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 Lemuriformes_a ANCESTRAL SPECIES 45 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 Coquerels sifaka MODERN SPECIES 637 TRAPPC1 (ENSPCOG00000027403) KCNAB3 (ENSPCOG00000028829) RNF227 (ENSPCOG00000014132) CHD3 (ENSPCOG00000020952) NAA38 (ENSPCOG00000020844) CYB5D1 (ENSPCOG00000026448) TMEM88 (ENSPCOG00000019225) KDM6B (ENSPCOG00000024321) DNAH2 (ENSPCOG00000020639) ENSPCOG00000024965 EFNB3 (ENSPCOG00000019954) WRAP53 (ENSPCOG00000027329) TP53 (ENSPCOG00000028656) ATP1B2 (ENSPCOG00000028840) SHBG (ENSPCOG00000024453) SAT2 (ENSPCOG00000020366) ##22 FXR2 (ENSPCOG00000024603) MPDU1 (ENSPCOG00000025499) SOX15 (ENSPCOG00000015435) CD68 (ENSPCOG00000003117) EIF4A1 (ENSPCOG00000012349) SENP3 (ENSPCOG00000025746) TNFSF13 (ENSPCOG00000011492) TNFSF12 (ENSPCOG00000021272) POLR2A (ENSPCOG00000025260) ENSPCOG00000020477 ZBTB4 (ENSPCOG00000027355) CHRNB1 (ENSPCOG00000017211) FGF11 (ENSPCOG00000021596) TMEM102 (ENSPCOG00000025065) SPEM3 (ENSPCOG00000027458) Greater bamboo lemur MODERN SPECIES 365 TRAPPC1 (ENSPSMG00000018230) KCNAB3 (ENSPSMG00000018250) RNF227 (ENSPSMG00000018255) CHD3 (ENSPSMG00000018318) CYB5D1 (ENSPSMG00000018348) NAA38 (ENSPSMG00000018356) TMEM88 (ENSPSMG00000018362) KDM6B (ENSPSMG00000018389) DNAH2 (ENSPSMG00000018427) ENSPSMG00000018444 EFNB3 (ENSPSMG00000018480) WRAP53 (ENSPSMG00000018546) TP53 (ENSPSMG00000018689) ATP1B2 (ENSPSMG00000018859) SHBG (ENSPSMG00000018923) SAT2 (ENSPSMG00000018971) ##22 FXR2 (ENSPSMG00000018995) MPDU1 (ENSPSMG00000019052) SOX15 (ENSPSMG00000019093) CD68 (ENSPSMG00000019122) EIF4A1 (ENSPSMG00000019175) SENP3 (ENSPSMG00000019323) TNFSF13 (ENSPSMG00000019343) TNFSF12 (ENSPSMG00000019367) ENSPSMG00000019387 ENSPSMG00000019393 ENSPSMG00000019398 ZBTB4 (ENSPSMG00000019404) CHRNB1 (ENSPSMG00000019419) FGF11 (ENSPSMG00000019425) ENSPSMG00000019430 Mouse lemur MODERN SPECIES 7 CNTROB (ENSMICG00000008866) TRAPPC1 (ENSMICG00000033485) KCNAB3 (ENSMICG00000008830) RNF227 (ENSMICG00000030993) CHD3 (ENSMICG00000008741) NAA38 (ENSMICG00000015147) CYB5D1 (ENSMICG00000015154) TMEM88 (ENSMICG00000038093) KDM6B (ENSMICG00000015117) DNAH2 (ENSMICG00000014873) EFNB3 (ENSMICG00000034462) WRAP53 (ENSMICG00000014862) TP53 (ENSMICG00000014853) ATP1B2 (ENSMICG00000036264) SHBG (ENSMICG00000014832) SAT2 (ENSMICG00000014822) ##22 FXR2 (ENSMICG00000014799) MPDU1 (ENSMICG00000014782) SOX15 (ENSMICG00000042795) ENSMICG00000014773 EIF4A1 (ENSMICG00000014759) ENSMICG00000014738 TNFSF13 (ENSMICG00000014718) TNFSF12 (ENSMICG00000041583) POLR2A (ENSMICG00000013372) ENSMICG00000037032 ZBTB4 (ENSMICG00000042619) CHRNB1 (ENSMICG00000013349) FGF11 (ENSMICG00000031532) TMEM102 (ENSMICG00000038598) SPEM3 (ENSMICG00000042623) Bushbaby MODERN SPECIES 161 CNTROB (ENSOGAG00000034061) TRAPPC1 (ENSOGAG00000032218) KCNAB3 (ENSOGAG00000008025) ENSOGAG00000003219 CHD3 (ENSOGAG00000003216) CYB5D1 (ENSOGAG00000027927) NAA38 (ENSOGAG00000030727) TMEM88 (ENSOGAG00000029549) KDM6B (ENSOGAG00000003207) DNAH2 (ENSOGAG00000002181) EFNB3 (ENSOGAG00000001453) WRAP53 (ENSOGAG00000001916) TP53 (ENSOGAG00000016871) ATP1B2 (ENSOGAG00000009564) SHBG (ENSOGAG00000029184) SAT2 (ENSOGAG00000016867) ##22 FXR2 (ENSOGAG00000008146) SOX15 (ENSOGAG00000008145) MPDU1 (ENSOGAG00000008141) CD68 (ENSOGAG00000008138) EIF4A1 (ENSOGAG00000008132) SENP3 (ENSOGAG00000008129) ENSOGAG00000008121 POLR2A (ENSOGAG00000033608) ENSOGAG00000033200 ZBTB4 (ENSOGAG00000034491) CHRNB1 (ENSOGAG00000002370) FGF11 (ENSOGAG00000012750) TMEM102 (ENSOGAG00000031432) SPEM2 (ENSOGAG00000034681) SPEM1 (ENSOGAG00000011428) Haplorrhini ANCESTRAL SPECIES 29 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Tarsier MODERN SPECIES 5154 CNTROB (ENSTSYG00000008107) TRAPPC1 (ENSTSYG00000030114) KCNAB3 (ENSTSYG00000037194) RNF227 (ENSTSYG00000008705) CHD3 (ENSTSYG00000035658) CYB5D1 (ENSTSYG00000036979) NAA38 (ENSTSYG00000033326) TMEM88 (ENSTSYG00000025417) KDM6B (ENSTSYG00000028891) DNAH2 (ENSTSYG00000000958) EFNB3 (ENSTSYG00000026018) WRAP53 (ENSTSYG00000009279) TP53 (ENSTSYG00000034279) ATP1B2 (ENSTSYG00000028614) SHBG (ENSTSYG00000014562) SAT2 (ENSTSYG00000013209) ##22 FXR2 (ENSTSYG00000004564) SOX15 (ENSTSYG00000032210) MPDU1 (ENSTSYG00000025837) CD68 (ENSTSYG00000004561) EIF4A1 (ENSTSYG00000004557) SENP3 (ENSTSYG00000004551) TNFSF13 (ENSTSYG00000027491) TNFSF12 (ENSTSYG00000033003) POLR2A (ENSTSYG00000012803) SLC35G6 (ENSTSYG00000031039) ZBTB4 (ENSTSYG00000034934) CHRNB1 (ENSTSYG00000027900) FGF11 (ENSTSYG00000033119) TMEM102 (ENSTSYG00000026877) SPEM3 (ENSTSYG00000027813) Simiiformes ANCESTRAL SPECIES 23 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Platyrrhini ANCESTRAL SPECIES 1 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a.h.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099.a ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Cebidae ANCESTRAL SPECIES 10 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a.h.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099.a ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Cebidae_a ANCESTRAL SPECIES 1 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a.h.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099.a ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Bolivian squirrel monkey MODERN SPECIES 74 GUCY2D (ENSSBOG00000034270) CNTROB (ENSSBOG00000013350) TRAPPC1 (ENSSBOG00000032902) KCNAB3 (ENSSBOG00000024892) CHD3 (ENSSBOG00000020719) CYB5D1 (ENSSBOG00000028583) NAA38 (ENSSBOG00000035591) TMEM88 (ENSSBOG00000035546) KDM6B (ENSSBOG00000031259) DNAH2 (ENSSBOG00000010082) EFNB3 (ENSSBOG00000028321) WRAP53 (ENSSBOG00000023171) TP53 (ENSSBOG00000020983) ATP1B2 (ENSSBOG00000024391) SHBG (ENSSBOG00000024727) SAT2 (ENSSBOG00000022741) ##22 FXR2 (ENSSBOG00000031395) SOX15 (ENSSBOG00000031727) MPDU1 (ENSSBOG00000034039) CD68 (ENSSBOG00000032218) EIF4A1 (ENSSBOG00000023267) SENP3 (ENSSBOG00000021388) TNFSF13 (ENSSBOG00000032125) TNFSF12 (ENSSBOG00000026171) POLR2A (ENSSBOG00000000808) ENSSBOG00000018582 ZBTB4 (ENSSBOG00000025456) CHRNB1 (ENSSBOG00000031299) FGF11 (ENSSBOG00000029299) TMEM102 (ENSSBOG00000019715) SPEM3 (ENSSBOG00000035363) Capuchin MODERN SPECIES 72 CNTROB (ENSCCAG00000006668) TRAPPC1 (ENSCCAG00000012314) KCNAB3 (ENSCCAG00000026835) CHD3 (ENSCCAG00000034792) RNF227 (ENSCCAG00000036242) CYB5D1 (ENSCCAG00000017780) NAA38 (ENSCCAG00000021358) KDM6B (ENSCCAG00000037137) ENSCCAG00000013286 DNAH2 (ENSCCAG00000024867) EFNB3 (ENSCCAG00000027538) WRAP53 (ENSCCAG00000033471) TP53 (ENSCCAG00000032786) ATP1B2 (ENSCCAG00000026533) SHBG (ENSCCAG00000036241) SAT2 (ENSCCAG00000020389) ##22 FXR2 (ENSCCAG00000013516) SOX15 (ENSCCAG00000026871) MPDU1 (ENSCCAG00000034105) CD68 (ENSCCAG00000028205) ENSCCAG00000029117 SENP3 (ENSCCAG00000031620) TNFSF12 (ENSCCAG00000025229) ENSCCAG00000026843 POLR2A (ENSCCAG00000020938) ENSCCAG00000021794 ZBTB4 (ENSCCAG00000022298) CHRNB1 (ENSCCAG00000033847) FGF11 (ENSCCAG00000034892) TMEM102 (ENSCCAG00000021991) SPEM3 (ENSCCAG00000024983) Marmoset MODERN SPECIES 17 TRAPPC1 (ENSCJAG00000072023) KCNAB3 (ENSCJAG00000014760) RNF227 (ENSCJAG00000041018) CHD3 (ENSCJAG00000014766) CYB5D1 (ENSCJAG00000014841) NAA38 (ENSCJAG00000014843) TMEM88 (ENSCJAG00000083328) KDM6B (ENSCJAG00000014850) ENSCJAG00000084720 DNAH2 (ENSCJAG00000014881) EFNB3 (ENSCJAG00000044444) WRAP53 (ENSCJAG00000014965) TP53 (ENSCJAG00000014978) ATP1B2 (ENSCJAG00000015019) SHBG (ENSCJAG00000015035) SAT2 (ENSCJAG00000015055) ##22 FXR2 (ENSCJAG00000015063) SOX15 (ENSCJAG00000007951) MPDU1 (ENSCJAG00000015095) CD68 (ENSCJAG00000048079) EIF4A1 (ENSCJAG00000015114) SENP3 (ENSCJAG00000015137) TNFSF13 (ENSCJAG00000032369) TNFSF12 (ENSCJAG00000039733) POLR2A (ENSCJAG00000015157) ENSCJAG00000000757 ZBTB4 (ENSCJAG00000000751) CHRNB1 (ENSCJAG00000000743) FGF11 (ENSCJAG00000016342) TMEM102 (ENSCJAG00000016369) SPEM3 (ENSCJAG00000042010) Mas night monkey MODERN SPECIES 807 CNTROB (ENSANAG00000038403) TRAPPC1 (ENSANAG00000027429) KCNAB3 (ENSANAG00000032405) RNF227 (ENSANAG00000024198) CHD3 (ENSANAG00000034323) CYB5D1 (ENSANAG00000037580) TMEM88 (ENSANAG00000034510) NAA38 (ENSANAG00000027273) KDM6B (ENSANAG00000021278) DNAH2 (ENSANAG00000022783) EFNB3 (ENSANAG00000030573) WRAP53 (ENSANAG00000026764) ENSANAG00000027861 ATP1B2 (ENSANAG00000021385) SHBG (ENSANAG00000037137) SAT2 (ENSANAG00000035086) ##22 FXR2 (ENSANAG00000023710) SOX15 (ENSANAG00000038364) MPDU1 (ENSANAG00000026260) CD68 (ENSANAG00000037344) EIF4A1 (ENSANAG00000035392) SENP3 (ENSANAG00000024203) TNFSF13 (ENSANAG00000037476) TNFSF12 (ENSANAG00000019845) POLR2A (ENSANAG00000020093) ENSANAG00000019773 ZBTB4 (ENSANAG00000030619) ENSANAG00000020109 FGF11 (ENSANAG00000027406) TMEM102 (ENSANAG00000033250) SPEM3 (ENSANAG00000030842) Catarrhini ANCESTRAL SPECIES 24 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Hominoidea ANCESTRAL SPECIES 25 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Gibbon MODERN SPECIES 9 TRAPPC1 (ENSNLEG00000009796) KCNAB3 (ENSNLEG00000036112) RNF227 (ENSNLEG00000032354) CHD3 (ENSNLEG00000009770) ENSNLEG00000027601 CYB5D1 (ENSNLEG00000009777) TMEM88 (ENSNLEG00000009773) KDM6B (ENSNLEG00000036136) DNAH2 (ENSNLEG00000009763) ENSNLEG00000009761 WRAP53 (ENSNLEG00000009753) TP53 (ENSNLEG00000009730) ATP1B2 (ENSNLEG00000009726) ENSNLEG00000018259 SHBG (ENSNLEG00000009705) SAT2 (ENSNLEG00000009698) ##22 FXR2 (ENSNLEG00000009662) MPDU1 (ENSNLEG00000009643) SOX15 (ENSNLEG00000009660) CD68 (ENSNLEG00000009633) EIF4A1 (ENSNLEG00000009547) SENP3 (ENSNLEG00000009529) TNFSF13 (ENSNLEG00000009510) TNFSF12 (ENSNLEG00000029187) POLR2A (ENSNLEG00000009460) ENSNLEG00000009458 ENSNLEG00000030377 FGF11 (ENSNLEG00000009446) ENSNLEG00000009444 ENSNLEG00000030627 SPEM1 (ENSNLEG00000009442) Hominidae ANCESTRAL SPECIES 20 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Homo/Pan/Gorilla group ANCESTRAL SPECIES 1 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c.a ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Homo/Pan group ANCESTRAL SPECIES 2 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c.a ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Pan ANCESTRAL SPECIES 3 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c.a ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Chimpanzee MODERN SPECIES 8 CNTROB (ENSPTRG00000008719) TRAPPC1 (ENSPTRG00000008717) KCNAB3 (ENSPTRG00000008716) RNF227 (ENSPTRG00000043140) CHD3 (ENSPTRG00000008714) CYB5D1 (ENSPTRG00000008713) NAA38 (ENSPTRG00000008712) TMEM88 (ENSPTRG00000008711) KDM6B (ENSPTRG00000008710) DNAH2 (ENSPTRG00000008709) EFNB3 (ENSPTRG00000046966) WRAP53 (ENSPTRG00000008705) TP53 (ENSPTRG00000008703) ATP1B2 (ENSPTRG00000008701) SHBG (ENSPTRG00000008700) SAT2 (ENSPTRG00000008699) ##22 FXR2 (ENSPTRG00000008698) SOX15 (ENSPTRG00000008697) MPDU1 (ENSPTRG00000008696) CD68 (ENSPTRG00000008695) EIF4A1 (ENSPTRG00000008694) SENP3 (ENSPTRG00000008693) TNFSF13 (ENSPTRG00000008692) TNFSF12 (ENSPTRG00000040723) POLR2A (ENSPTRG00000008691) SLC35G6 (ENSPTRG00000042155) ZBTB4 (ENSPTRG00000008690) CHRNB1 (ENSPTRG00000008689) FGF11 (ENSPTRG00000050130) TMEM102 (ENSPTRG00000008688) SPEM3 (ENSPTRG00000046239) Bonobo MODERN SPECIES 8 CNTROB (ENSPPAG00000035938) TRAPPC1 (ENSPPAG00000029301) KCNAB3 (ENSPPAG00000018201) RNF227 (ENSPPAG00000040198) CHD3 (ENSPPAG00000032886) CYB5D1 (ENSPPAG00000037753) ENSPPAG00000026097 TMEM88 (ENSPPAG00000035566) KDM6B (ENSPPAG00000033078) DNAH2 (ENSPPAG00000038375) EFNB3 (ENSPPAG00000028302) WRAP53 (ENSPPAG00000041493) TP53 (ENSPPAG00000028702) ATP1B2 (ENSPPAG00000035739) SHBG (ENSPPAG00000040598) SAT2 (ENSPPAG00000039838) ##22 FXR2 (ENSPPAG00000029387) SOX15 (ENSPPAG00000039096) MPDU1 (ENSPPAG00000040485) CD68 (ENSPPAG00000026476) EIF4A1 (ENSPPAG00000039921) SENP3 (ENSPPAG00000006924) TNFSF13 (ENSPPAG00000025960) TNFSF12 (ENSPPAG00000037412) POLR2A (ENSPPAG00000043734) ZBTB4 (ENSPPAG00000039063) CHRNB1 (ENSPPAG00000035976) FGF11 (ENSPPAG00000034383) TMEM102 (ENSPPAG00000030935) SPEM3 (ENSPPAG00000030365) SPEM2 (ENSPPAG00000039663) Human MODERN SPECIES 8 GUCY2D (ENSG00000132518) CNTROB (ENSG00000170037) TRAPPC1 (ENSG00000170043) KCNAB3 (ENSG00000170049) RNF227 (ENSG00000179859) CHD3 (ENSG00000170004) CYB5D1 (ENSG00000182224) NAA38 (ENSG00000183011) TMEM88 (ENSG00000167874) KDM6B (ENSG00000132510) DNAH2 (ENSG00000183914) EFNB3 (ENSG00000108947) WRAP53 (ENSG00000141499) TP53 (ENSG00000141510) ATP1B2 (ENSG00000129244) SAT2 (ENSG00000141504) ##22 SHBG (ENSG00000129214) FXR2 (ENSG00000129245) SOX15 (ENSG00000129194) MPDU1 (ENSG00000129255) CD68 (ENSG00000129226) EIF4A1 (ENSG00000161960) SENP3 (ENSG00000161956) TNFSF13 (ENSG00000161955) TNFSF12-TNFSF13 (ENSG00000248871) TNFSF12 (ENSG00000239697) POLR2A (ENSG00000181222) SLC35G6 (ENSG00000259224) ZBTB4 (ENSG00000174282) CHRNB1 (ENSG00000170175) FGF11 (ENSG00000161958) Gorilla MODERN SPECIES 8 CNTROB (ENSGGOG00000006451) TRAPPC1 (ENSGGOG00000006448) KCNAB3 (ENSGGOG00000006442) RNF227 (ENSGGOG00000042011) CHD3 (ENSGGOG00000013496) CYB5D1 (ENSGGOG00000015321) NAA38 (ENSGGOG00000015317) TMEM88 (ENSGGOG00000015315) KDM6B (ENSGGOG00000015307) DNAH2 (ENSGGOG00000001454) EFNB3 (ENSGGOG00000005033) WRAP53 (ENSGGOG00000005026) TP53 (ENSGGOG00000009786) ATP1B2 (ENSGGOG00000002715) SHBG (ENSGGOG00000025587) SAT2 (ENSGGOG00000027495) ##22 FXR2 (ENSGGOG00000024357) SOX15 (ENSGGOG00000027463) MPDU1 (ENSGGOG00000026489) CD68 (ENSGGOG00000023269) EIF4A1 (ENSGGOG00000024702) SENP3 (ENSGGOG00000011537) TNFSF13 (ENSGGOG00000011530) TNFSF12 (ENSGGOG00000041310) POLR2A (ENSGGOG00000014800) ZBTB4 (ENSGGOG00000016401) CHRNB1 (ENSGGOG00000016388) FGF11 (ENSGGOG00000011826) TMEM102 (ENSGGOG00000011820) SPEM3 (ENSGGOG00000037291) SPEM2 (ENSGGOG00000011816) Orangutan MODERN SPECIES 8 CNTROB (ENSPPYG00000007944) TRAPPC1 (ENSPPYG00000007943) KCNAB3 (ENSPPYG00000007942) RNF227 (ENSPPYG00000041261) CHD3 (ENSPPYG00000007940) CYB5D1 (ENSPPYG00000007938) ENSPPYG00000007937 TMEM88 (ENSPPYG00000007936) DNAH2 (ENSPPYG00000007935) EFNB3 (ENSPPYG00000031420) WRAP53 (ENSPPYG00000008860) ENSPPYG00000031962 TP53 (ENSPPYG00000007934) ATP1B2 (ENSPPYG00000007933) SHBG (ENSPPYG00000007932) ENSPPYG00000007931 ##22 FXR2 (ENSPPYG00000007930) SOX15 (ENSPPYG00000007929) MPDU1 (ENSPPYG00000007928) CD68 (ENSPPYG00000007927) EIF4A1 (ENSPPYG00000007926) SENP3 (ENSPPYG00000031623) TNFSF13 (ENSPPYG00000007925) ENSPPYG00000030206 POLR2A (ENSPPYG00000007924) ENSPPYG00000007923 ZBTB4 (ENSPPYG00000007922) CHRNB1 (ENSPPYG00000007921) FGF11 (ENSPPYG00000038705) TMEM102 (ENSPPYG00000007919) SPEM3 (ENSPPYG00000031603) Cercopithecidae ANCESTRAL SPECIES 26 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Rhinopithecus ANCESTRAL SPECIES 6 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Golden snub-nosed monkey MODERN SPECIES 1023 TRAPPC1 (ENSRROG00000029283) KCNAB3 (ENSRROG00000040156) RNF227 (ENSRROG00000037731) CHD3 (ENSRROG00000029554) CYB5D1 (ENSRROG00000033738) NAA38 (ENSRROG00000037370) TMEM88 (ENSRROG00000043517) KDM6B (ENSRROG00000030681) ENSRROG00000028496 DNAH2 (ENSRROG00000035849) EFNB3 (ENSRROG00000045493) WRAP53 (ENSRROG00000032629) TP53 (ENSRROG00000037163) ATP1B2 (ENSRROG00000043331) SHBG (ENSRROG00000041036) SAT2 (ENSRROG00000002103) ##22 FXR2 (ENSRROG00000035470) SOX15 (ENSRROG00000035518) MPDU1 (ENSRROG00000039715) CD68 (ENSRROG00000036188) EIF4A1 (ENSRROG00000032175) SENP3 (ENSRROG00000036921) TNFSF13 (ENSRROG00000043005) TNFSF12 (ENSRROG00000040782) POLR2A (ENSRROG00000029583) ENSRROG00000039647 ZBTB4 (ENSRROG00000024460) CHRNB1 (ENSRROG00000034762) FGF11 (ENSRROG00000013032) TMEM102 (ENSRROG00000038922) SPEM3 (ENSRROG00000025439) Black snub-nosed monkey MODERN SPECIES 1512 CNTROB (ENSRBIG00000026983) TRAPPC1 (ENSRBIG00000039656) KCNAB3 (ENSRBIG00000036785) RNF227 (ENSRBIG00000039918) CHD3 (ENSRBIG00000033562) CYB5D1 (ENSRBIG00000031810) NAA38 (ENSRBIG00000039054) TMEM88 (ENSRBIG00000041639) KDM6B (ENSRBIG00000032265) DNAH2 (ENSRBIG00000032058) EFNB3 (ENSRBIG00000021710) WRAP53 (ENSRBIG00000035756) TP53 (ENSRBIG00000038164) ATP1B2 (ENSRBIG00000043880) SHBG (ENSRBIG00000034360) SAT2 (ENSRBIG00000028746) ##22 FXR2 (ENSRBIG00000034647) SOX15 (ENSRBIG00000025597) MPDU1 (ENSRBIG00000025521) CD68 (ENSRBIG00000040396) EIF4A1 (ENSRBIG00000044495) SENP3 (ENSRBIG00000039122) TNFSF13 (ENSRBIG00000032576) TNFSF12 (ENSRBIG00000043993) POLR2A (ENSRBIG00000002471) ENSRBIG00000017561 ZBTB4 (ENSRBIG00000042670) CHRNB1 (ENSRBIG00000026518) FGF11 (ENSRBIG00000031378) TMEM102 (ENSRBIG00000027968) SPEM3 (ENSRBIG00000041166) Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Vervet Monkey MODERN SPECIES 7 GUCY2D (ENSCSAG00000011056) CNTROB (ENSCSAG00000011070) TRAPPC1 (ENSCSAG00000011079) KCNAB3 (ENSCSAG00000011097) CHD3 (ENSCSAG00000011122) CYB5D1 (ENSCSAG00000011130) NAA38 (ENSCSAG00000011136) TMEM88 (ENSCSAG00000011143) KDM6B (ENSCSAG00000011157) DNAH2 (ENSCSAG00000011272) EFNB3 (ENSCSAG00000011328) WRAP53 (ENSCSAG00000011338) TP53 (ENSCSAG00000011345) ATP1B2 (ENSCSAG00000011352) SHBG (ENSCSAG00000011359) SAT2 (ENSCSAG00000011371) ##22 FXR2 (ENSCSAG00000011386) SOX15 (ENSCSAG00000011393) MPDU1 (ENSCSAG00000011425) CD68 (ENSCSAG00000011452) EIF4A1 (ENSCSAG00000011468) SENP3 (ENSCSAG00000011478) TNFSF13 (ENSCSAG00000011511) POLR2A (ENSCSAG00000011644) ENSCSAG00000000566 ZBTB4 (ENSCSAG00000011692) CHRNB1 (ENSCSAG00000011722) FGF11 (ENSCSAG00000011727) TMEM102 (ENSCSAG00000011729) SPEM2 (ENSCSAG00000011734) SPEM1 (ENSCSAG00000011740) Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Cercopithecinae_b ANCESTRAL SPECIES 26 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Cercopithecinae_d ANCESTRAL SPECIES 14 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Sooty mangabey MODERN SPECIES 111 CNTROB (ENSCATG00000030776) TRAPPC1 (ENSCATG00000037906) KCNAB3 (ENSCATG00000034841) RNF227 (ENSCATG00000027881) CHD3 (ENSCATG00000041717) NAA38 (ENSCATG00000032806) CYB5D1 (ENSCATG00000030804) TMEM88 (ENSCATG00000042149) KDM6B (ENSCATG00000043776) DNAH2 (ENSCATG00000044804) EFNB3 (ENSCATG00000040835) WRAP53 (ENSCATG00000037604) TP53 (ENSCATG00000039093) ATP1B2 (ENSCATG00000034239) SHBG (ENSCATG00000017374) SAT2 (ENSCATG00000000140) ##22 FXR2 (ENSCATG00000039859) MPDU1 (ENSCATG00000028120) SOX15 (ENSCATG00000040468) CD68 (ENSCATG00000041736) EIF4A1 (ENSCATG00000041861) SENP3 (ENSCATG00000034990) TNFSF13 (ENSCATG00000043327) TNFSF12 (ENSCATG00000025895) POLR2A (ENSCATG00000013680) ZBTB4 (ENSCATG00000037178) ENSCATG00000035825 CHRNB1 (ENSCATG00000040923) FGF11 (ENSCATG00000035004) TMEM102 (ENSCATG00000032916) SPEM3 (ENSCATG00000044138) Drill MODERN SPECIES 1146 CNTROB (ENSMLEG00000031828) TRAPPC1 (ENSMLEG00000043008) KCNAB3 (ENSMLEG00000027562) ENSMLEG00000028580 CHD3 (ENSMLEG00000032249) NAA38 (ENSMLEG00000037461) CYB5D1 (ENSMLEG00000034639) TMEM88 (ENSMLEG00000001580) KDM6B (ENSMLEG00000038010) DNAH2 (ENSMLEG00000016835) EFNB3 (ENSMLEG00000031368) WRAP53 (ENSMLEG00000017731) TP53 (ENSMLEG00000042592) ATP1B2 (ENSMLEG00000029537) SHBG (ENSMLEG00000029937) SAT2 (ENSMLEG00000038252) ##22 FXR2 (ENSMLEG00000034764) SOX15 (ENSMLEG00000042554) MPDU1 (ENSMLEG00000013173) CD68 (ENSMLEG00000042433) EIF4A1 (ENSMLEG00000032647) SENP3 (ENSMLEG00000032812) TNFSF13 (ENSMLEG00000029071) TNFSF12 (ENSMLEG00000036048) POLR2A (ENSMLEG00000030263) ZBTB4 (ENSMLEG00000028905) ENSMLEG00000026925 CHRNB1 (ENSMLEG00000028167) FGF11 (ENSMLEG00000042561) ENSMLEG00000025032 SPEM3 (ENSMLEG00000026102) Olive baboon MODERN SPECIES 8 CNTROB (ENSPANG00000023932) TRAPPC1 (ENSPANG00000023940) KCNAB3 (ENSPANG00000023939) ENSPANG00000048944 CHD3 (ENSPANG00000023938) CYB5D1 (ENSPANG00000023937) NAA38 (ENSPANG00000023935) ENSPANG00000023934 KDM6B (ENSPANG00000024053) DNAH2 (ENSPANG00000030477) EFNB3 (ENSPANG00000049483) WRAP53 (ENSPANG00000024062) TP53 (ENSPANG00000024061) ATP1B2 (ENSPANG00000024060) SHBG (ENSPANG00000024059) SAT2 (ENSPANG00000035750) ##22 FXR2 (ENSPANG00000024057) SOX15 (ENSPANG00000024056) MPDU1 (ENSPANG00000024055) CD68 (ENSPANG00000024092) EIF4A1 (ENSPANG00000024093) SENP3 (ENSPANG00000024101) TNFSF13 (ENSPANG00000029662) TNFSF12 (ENSPANG00000024100) ENSPANG00000024099 ENSPANG00000003329 ZBTB4 (ENSPANG00000024098) CHRNB1 (ENSPANG00000024097) FGF11 (ENSPANG00000024096) TMEM102 (ENSPANG00000024095) SPEM2 (ENSPANG00000024094) Macaca ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Pig-tailed macaque MODERN SPECIES 94 CNTROB (ENSMNEG00000030494) TRAPPC1 (ENSMNEG00000032756) KCNAB3 (ENSMNEG00000040660) RNF227 (ENSMNEG00000045490) CHD3 (ENSMNEG00000001728) CYB5D1 (ENSMNEG00000034836) NAA38 (ENSMNEG00000031597) TMEM88 (ENSMNEG00000039594) KDM6B (ENSMNEG00000040752) DNAH2 (ENSMNEG00000033625) EFNB3 (ENSMNEG00000029996) WRAP53 (ENSMNEG00000036812) TP53 (ENSMNEG00000038875) ATP1B2 (ENSMNEG00000044869) SHBG (ENSMNEG00000038821) SAT2 (ENSMNEG00000040277) ##22 FXR2 (ENSMNEG00000031195) SOX15 (ENSMNEG00000038412) MPDU1 (ENSMNEG00000034487) CD68 (ENSMNEG00000039057) ENSMNEG00000035880 SENP3 (ENSMNEG00000039750) TNFSF13 (ENSMNEG00000039273) TNFSF12 (ENSMNEG00000045341) POLR2A (ENSMNEG00000040407) ENSMNEG00000034332 ZBTB4 (ENSMNEG00000017704) CHRNB1 (ENSMNEG00000039379) FGF11 (ENSMNEG00000028210) TMEM102 (ENSMNEG00000039019) SPEM3 (ENSMNEG00000004173) Macaca_a ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a Rhesus MODERN SPECIES 7 TRAPPC1 (ENSMMUG00000055778) KCNAB3 (ENSMMUG00000022230) RNF227 (ENSMMUG00000046058) CHD3 (ENSMMUG00000022221) CYB5D1 (ENSMMUG00000063668) NAA38 (ENSMMUG00000008178) TMEM88 (ENSMMUG00000008176) KDM6B (ENSMMUG00000008173) ENSMMUG00000049849 DNAH2 (ENSMMUG00000008166) EFNB3 (ENSMMUG00000048204) WRAP53 (ENSMMUG00000008637) TP53 (ENSMMUG00000008639) ATP1B2 (ENSMMUG00000044486) SHBG (ENSMMUG00000013513) SAT2 (ENSMMUG00000013511) ##22 FXR2 (ENSMMUG00000013510) SOX15 (ENSMMUG00000057228) MPDU1 (ENSMMUG00000013503) CD68 (ENSMMUG00000013501) EIF4A1 (ENSMMUG00000013499) SENP3 (ENSMMUG00000006332) TNFSF12 (ENSMMUG00000006327) ENSMMUG00000060007 POLR2A (ENSMMUG00000023620) ENSMMUG00000023619 ZBTB4 (ENSMMUG00000023616) CHRNB1 (ENSMMUG00000017690) FGF11 (ENSMMUG00000061498) TMEM102 (ENSMMUG00000009709) SPEM2 (ENSMMUG00000015623) Crab-eating macaque MODERN SPECIES 7 ALOX15B (ENSMFAG00000002960) GUCY2D (ENSMFAG00000031931) CNTROB (ENSMFAG00000009931) TRAPPC1 (ENSMFAG00000036509) KCNAB3 (ENSMFAG00000040577) ENSMFAG00000065437 CHD3 (ENSMFAG00000020113) NAA38 (ENSMFAG00000037580) TMEM88 (ENSMFAG00000002896) DNAH2 (ENSMFAG00000003133) EFNB3 (ENSMFAG00000052831) WRAP53 (ENSMFAG00000033679) TP53 (ENSMFAG00000038506) ATP1B2 (ENSMFAG00000039656) SHBG (ENSMFAG00000000521) SAT2 (ENSMFAG00000001081) ##22 FXR2 (ENSMFAG00000043282) MPDU1 (ENSMFAG00000041864) CD68 (ENSMFAG00000032792) SENP3 (ENSMFAG00000039010) TNFSF13 (ENSMFAG00000039025) TNFSF12 (ENSMFAG00000002034) ENSMFAG00000055030 ENSMFAG00000053028 ENSMFAG00000034282 ENSMFAG00000007042 ZBTB4 (ENSMFAG00000000576) CHRNB1 (ENSMFAG00000042053) FGF11 (ENSMFAG00000003329) TMEM102 (ENSMFAG00000032693) ENSMFAG00000058204 Laurasiatheria ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 Eulipotyphla ANCESTRAL SPECIES 1 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00930000151033 ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049389 ENSGT00940000160598 ENSGT00390000000334 Common shrew MODERN SPECIES 709 DNAH2 (ENSSARG00000006258) EFNB3 (ENSSARG00000006251) WRAP53 (ENSSARG00000006219) TP53 (ENSSARG00000006206) ATP1B2 (ENSSARG00000006199) SHBG (ENSSARG00000006171) ENSSARG00000006154 ##22 FXR2 (ENSSARG00000006113) SOX15 (ENSSARG00000006102) MPDU1 (ENSSARG00000006085) CD68 (ENSSARG00000006037) EIF4A1 (ENSSARG00000006017) SENP3 (ENSSARG00000005973) ENSSARG00000005951 POLR2A (ENSSARG00000005875) ZBTB4 (ENSSARG00000005864) CHRNB1 (ENSSARG00000005847) FGF11 (ENSSARG00000005833) TMEM102 (ENSSARG00000005828) SPEM1 (ENSSARG00000005792) NLGN2 (ENSSARG00000005689) TMEM256 (ENSSARG00000005672) Hedgehog MODERN SPECIES 3898 SAT2 (ENSEEUG00000010739) ##22 ATP1B2 (ENSEEUG00000010516) Laurasiatheria_a ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 Laurasiatheria_b ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 Carnivora ANCESTRAL SPECIES 24 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 Felidae ANCESTRAL SPECIES 26 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 Panthera ANCESTRAL SPECIES 25 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 Panthera_a ANCESTRAL SPECIES 28 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT01060000249269 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT01010000225782 ENSGT00940000158661 ENSGT00940000158058 lion MODERN SPECIES 429 SAT2 (ENSPLOG00000021924) ##22 leopard MODERN SPECIES 61 ALOX12B (ENSPPRG00000010262) ALOX15B (ENSPPRG00000010099) GUCY2D (ENSPPRG00000006843) CNTROB (ENSPPRG00000006043) TRAPPC1 (ENSPPRG00000002295) KCNAB3 (ENSPPRG00000001895) CHD3 (ENSPPRG00000000626) ENSPPRG00000012321 NAA38 (ENSPPRG00000012023) TMEM88 (ENSPPRG00000011304) EFNB3 (ENSPPRG00000023443) WRAP53 (ENSPPRG00000024366) TP53 (ENSPPRG00000013238) ATP1B2 (ENSPPRG00000012349) ENSPPRG00000011621 SAT2 (ENSPPRG00000010310) ##22 ENSPPRG00000009200 SOX15 (ENSPPRG00000008956) ENSPPRG00000008597 ENSPPRG00000007983 ENSPPRG00000007910 CD68 (ENSPPRG00000007544) EIF4A1 (ENSPPRG00000006906) SENP3 (ENSPPRG00000004329) TNFSF13 (ENSPPRG00000003669) TNFSF12 (ENSPPRG00000001809) ENSPPRG00000001321 ENSPPRG00000000743 ENSPPRG00000000344 ZBTB4 (ENSPPRG00000022694) CHRNB1 (ENSPPRG00000022918) Tiger MODERN SPECIES 361 ENSPTIG00000019249 ALOX12B (ENSPTIG00000019556) ALOX15B (ENSPTIG00000005281) TRAPPC1 (ENSPTIG00000017575) KCNAB3 (ENSPTIG00000018560) ENSPTIG00000020407 CYB5D1 (ENSPTIG00000017460) ENSPTIG00000018163 WRAP53 (ENSPTIG00000016810) TP53 (ENSPTIG00000020802) ATP1B2 (ENSPTIG00000021917) ENSPTIG00000000999 SAT2 (ENSPTIG00000005757) ##22 FXR2 (ENSPTIG00000007284) SOX15 (ENSPTIG00000009631) MPDU1 (ENSPTIG00000010234) ENSPTIG00000011950 EIF4A1 (ENSPTIG00000012373) SENP3 (ENSPTIG00000014579) TNFSF13 (ENSPTIG00000016733) ENSPTIG00000020354 ENSPTIG00000005583 ENSPTIG00000007434 ENSPTIG00000008415 CHRNB1 (ENSPTIG00000009669) ENSPTIG00000012444 ENSPTIG00000013663 TMEM256 (ENSPTIG00000016291) Cat MODERN SPECIES 245 CNTROB (ENSFCAG00000009631) TRAPPC1 (ENSFCAG00000029050) KCNAB3 (ENSFCAG00000009630) RNF227 (ENSFCAG00000042971) CHD3 (ENSFCAG00000009629) CYB5D1 (ENSFCAG00000009628) NAA38 (ENSFCAG00000026713) TMEM88 (ENSFCAG00000044355) KDM6B (ENSFCAG00000023668) DNAH2 (ENSFCAG00000009626) EFNB3 (ENSFCAG00000040232) WRAP53 (ENSFCAG00000009624) TP53 (ENSFCAG00000009623) ATP1B2 (ENSFCAG00000009622) SHBG (ENSFCAG00000009621) SAT2 (ENSFCAG00000037847) ##22 FXR2 (ENSFCAG00000009620) SOX15 (ENSFCAG00000009619) MPDU1 (ENSFCAG00000009618) CD68 (ENSFCAG00000035776) EIF4A1 (ENSFCAG00000024897) SENP3 (ENSFCAG00000009615) TNFSF12 (ENSFCAG00000040186) ENSFCAG00000031726 ZBTB4 (ENSFCAG00000040596) POLR2A (ENSFCAG00000009614) FGF11 (ENSFCAG00000029958) ENSFCAG00000043436 TMEM102 (ENSFCAG00000009613) SPEM2 (ENSFCAG00000012582) SPEM1 (ENSFCAG00000044575) Caniformia ANCESTRAL SPECIES 27 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Canidae ANCESTRAL SPECIES 30 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 Canis_lupus ANCESTRAL SPECIES 5 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 Dingo MODERN SPECIES 373 CNTROB (ENSCAFG00020007385) TRAPPC1 (ENSCAFG00020007393) KCNAB3 (ENSCAFG00020007397) RNF227 (ENSCAFG00020007407) CHD3 (ENSCAFG00020007422) CYB5D1 (ENSCAFG00020007490) NAA38 (ENSCAFG00020007495) TMEM88 (ENSCAFG00020007497) ENSCAFG00020007499 DNAH2 (ENSCAFG00020007540) EFNB3 (ENSCAFG00020007689) ENSCAFG00020007694 TP53 (ENSCAFG00020007703) ATP1B2 (ENSCAFG00020007718) SHBG (ENSCAFG00020007727) SAT2 (ENSCAFG00020007745) ##22 FXR2 (ENSCAFG00020007819) SOX15 (ENSCAFG00020007832) MPDU1 (ENSCAFG00020007837) ENSCAFG00020007845 EIF4A1 (ENSCAFG00020007858) SENP3 (ENSCAFG00020007894) TNFSF13 (ENSCAFG00020007896) TNFSF12 (ENSCAFG00020007901) POLR2A (ENSCAFG00020007929) ENSCAFG00020008394 ENSCAFG00020008397 CHRNB1 (ENSCAFG00020008402) FGF11 (ENSCAFG00020008419) TMEM102 (ENSCAFG00020008427) SPEM2 (ENSCAFG00020008429) Red fox MODERN SPECIES 52 GUCY2D (ENSVVUG00000028064) CNTROB (ENSVVUG00000028051) TRAPPC1 (ENSVVUG00000028041) KCNAB3 (ENSVVUG00000028039) ENSVVUG00000028036 CHD3 (ENSVVUG00000028011) CYB5D1 (ENSVVUG00000028007) NAA38 (ENSVVUG00000028004) KDM6B (ENSVVUG00000027979) DNAH2 (ENSVVUG00000027935) EFNB3 (ENSVVUG00000027928) WRAP53 (ENSVVUG00000027927) TP53 (ENSVVUG00000027925) ATP1B2 (ENSVVUG00000027923) ENSVVUG00000027921 SAT2 (ENSVVUG00000027919) ##22 FXR2 (ENSVVUG00000027916) SOX15 (ENSVVUG00000027913) MPDU1 (ENSVVUG00000027907) ENSVVUG00000027902 ENSVVUG00000027899 TNFSF13 (ENSVVUG00000027892) TNFSF12 (ENSVVUG00000027886) ENSVVUG00000027884 ENSVVUG00000027883 POLR2A (ENSVVUG00000027878) ENSVVUG00000027876 ENSVVUG00000027874 CHRNB1 (ENSVVUG00000027871) FGF11 (ENSVVUG00000027870) TMEM102 (ENSVVUG00000027868) Caniformia_b ANCESTRAL SPECIES 28 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Mustelinae ANCESTRAL SPECIES 27 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000164517 Ferret MODERN SPECIES 237 TRAPPC1 (ENSMPUG00000008842) KCNAB3 (ENSMPUG00000008846) CHD3 (ENSMPUG00000008861) ENSMPUG00000008872 CYB5D1 (ENSMPUG00000008880) NAA38 (ENSMPUG00000008886) ENSMPUG00000008900 KDM6B (ENSMPUG00000008906) ENSMPUG00000019728 DNAH2 (ENSMPUG00000008919) EFNB3 (ENSMPUG00000008984) WRAP53 (ENSMPUG00000009013) TP53 (ENSMPUG00000009017) ATP1B2 (ENSMPUG00000009026) SHBG (ENSMPUG00000009031) SAT2 (ENSMPUG00000009043) ##22 FXR2 (ENSMPUG00000009051) SOX15 (ENSMPUG00000009383) MPDU1 (ENSMPUG00000009390) CD68 (ENSMPUG00000009464) EIF4A1 (ENSMPUG00000009529) SENP3 (ENSMPUG00000009627) TNFSF13 (ENSMPUG00000009639) POLR2A (ENSMPUG00000009648) ENSMPUG00000019729 ZBTB4 (ENSMPUG00000009666) CHRNB1 (ENSMPUG00000009679) FGF11 (ENSMPUG00000009684) TMEM102 (ENSMPUG00000009776) ENSMPUG00000009781 SPEM2 (ENSMPUG00000009788) American mink MODERN SPECIES 204 CNTROB (ENSNVIG00000004630) TRAPPC1 (ENSNVIG00000004612) KCNAB3 (ENSNVIG00000004551) RNF227 (ENSNVIG00000004540) CHD3 (ENSNVIG00000004454) CYB5D1 (ENSNVIG00000004437) NAA38 (ENSNVIG00000004415) TMEM88 (ENSNVIG00000004407) KDM6B (ENSNVIG00000004348) DNAH2 (ENSNVIG00000004198) EFNB3 (ENSNVIG00000004177) WRAP53 (ENSNVIG00000004147) TP53 (ENSNVIG00000004120) ATP1B2 (ENSNVIG00000004107) SHBG (ENSNVIG00000003885) SAT2 (ENSNVIG00000003874) ##22 FXR2 (ENSNVIG00000003843) SOX15 (ENSNVIG00000003826) MPDU1 (ENSNVIG00000003764) CD68 (ENSNVIG00000003734) EIF4A1 (ENSNVIG00000003608) SENP3 (ENSNVIG00000003581) TNFSF13 (ENSNVIG00000003512) TNFSF12 (ENSNVIG00000003458) POLR2A (ENSNVIG00000003359) ENSNVIG00000003342 ENSNVIG00000003323 CHRNB1 (ENSNVIG00000003284) ENSNVIG00000003264 TMEM102 (ENSNVIG00000003238) SPEM3 (ENSNVIG00000003210) Ursidae ANCESTRAL SPECIES 31 ENSGT00940000161326 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a.b ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Giant Panda MODERN SPECIES 8 CNTROB (ENSAMEG00000002959) TRAPPC1 (ENSAMEG00000002987) KCNAB3 (ENSAMEG00000002995) CHD3 (ENSAMEG00000003025) CYB5D1 (ENSAMEG00000016997) TMEM88 (ENSAMEG00000030755) NAA38 (ENSAMEG00000028193) ENSAMEG00000016978 DNAH2 (ENSAMEG00000016905) ENSAMEG00000016900 ENSAMEG00000024256 WRAP53 (ENSAMEG00000016886) TP53 (ENSAMEG00000016851) ATP1B2 (ENSAMEG00000016828) SHBG (ENSAMEG00000016816) SAT2 (ENSAMEG00000027590) ##22 FXR2 (ENSAMEG00000016775) SOX15 (ENSAMEG00000016773) MPDU1 (ENSAMEG00000016768) ENSAMEG00000016765 EIF4A1 (ENSAMEG00000016753) SENP3 (ENSAMEG00000016745) TNFSF13 (ENSAMEG00000016736) ENSAMEG00000027113 POLR2A (ENSAMEG00000016265) ENSAMEG00000016728 ZBTB4 (ENSAMEG00000027486) CHRNB1 (ENSAMEG00000016704) FGF11 (ENSAMEG00000016691) ENSAMEG00000030835 TMEM102 (ENSAMEG00000030198) Ursus ANCESTRAL SPECIES 24 ENSGT00940000161326 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a.b ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Polar bear MODERN SPECIES 147 ALOX12B (ENSUMAG00000017196) ALOX15B (ENSUMAG00000017172) ENSUMAG00000017167 ENSUMAG00000017157 ENSUMAG00000017151 TRAPPC1 (ENSUMAG00000017148) KCNAB3 (ENSUMAG00000017136) ENSUMAG00000017051 NAA38 (ENSUMAG00000017042) DNAH2 (ENSUMAG00000016966) EFNB3 (ENSUMAG00000016944) ENSUMAG00000016938 TP53 (ENSUMAG00000016933) ATP1B2 (ENSUMAG00000016929) ENSUMAG00000016909 ENSUMAG00000016905 ##22 FXR2 (ENSUMAG00000016725) MPDU1 (ENSUMAG00000016696) CD68 (ENSUMAG00000016694) ENSUMAG00000016558 SENP3 (ENSUMAG00000016531) TNFSF13 (ENSUMAG00000016524) POLR2A (ENSUMAG00000015732) ENSUMAG00000015636 ENSUMAG00000015628 CHRNB1 (ENSUMAG00000015600) ENSUMAG00000015596 ENSUMAG00000015588 ENSUMAG00000015586 ENSUMAG00000015577 TNK1 (ENSUMAG00000015556) American black bear MODERN SPECIES 2473 TP53 (ENSUAMG00000000730) ATP1B2 (ENSUAMG00000001206) SHBG (ENSUAMG00000001210) ENSUAMG00000001219 ##22 FXR2 (ENSUAMG00000001330) SOX15 (ENSUAMG00000003560) MPDU1 (ENSUAMG00000003564) CD68 (ENSUAMG00000003574) EIF4A1 (ENSUAMG00000003583) SENP3 (ENSUAMG00000003611) TNFSF13 (ENSUAMG00000003616) TNFSF12 (ENSUAMG00000003624) Laurasiatheria_c ANCESTRAL SPECIES 3 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00950000183608 Chiroptera ANCESTRAL SPECIES 29 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00950000183608 Microchiroptera ANCESTRAL SPECIES ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00950000183608 Greater horseshoe bat MODERN SPECIES 13 CNTROB (ENSRFEG00010008816) ENSRFEG00010008853 KCNAB3 (ENSRFEG00010008905) RNF227 (ENSRFEG00010009035) CHD3 (ENSRFEG00010009166) NAA38 (ENSRFEG00010010129) CYB5D1 (ENSRFEG00010010233) TMEM88 (ENSRFEG00010010263) KDM6B (ENSRFEG00010010342) ENSRFEG00010010696 EFNB3 (ENSRFEG00010010826) WRAP53 (ENSRFEG00010010871) TP53 (ENSRFEG00010011010) ATP1B2 (ENSRFEG00010011476) SHBG (ENSRFEG00010011569) SAT2 (ENSRFEG00010011849) ##22 FXR2 (ENSRFEG00010011949) SOX15 (ENSRFEG00010012003) MPDU1 (ENSRFEG00010012043) CD68 (ENSRFEG00010012245) EIF4A1 (ENSRFEG00010012446) SENP3 (ENSRFEG00010012722) TNFSF13 (ENSRFEG00010012795) TNFSF12 (ENSRFEG00010013167) POLR2A (ENSRFEG00010013267) ENSRFEG00010013350 ZBTB4 (ENSRFEG00010013410) CHRNB1 (ENSRFEG00010013455) FGF11 (ENSRFEG00010013501) TMEM102 (ENSRFEG00010013645) ENSRFEG00010013691 Megabat MODERN SPECIES 1723 CNTROB (ENSPVAG00000016354) TRAPPC1 (ENSPVAG00000016353) KCNAB3 (ENSPVAG00000016350) ENSPVAG00000016349 CHD3 (ENSPVAG00000016344) CYB5D1 (ENSPVAG00000016343) NAA38 (ENSPVAG00000016342) ENSPVAG00000016341 KDM6B (ENSPVAG00000016339) DNAH2 (ENSPVAG00000016329) EFNB3 (ENSPVAG00000016328) WRAP53 (ENSPVAG00000016324) TP53 (ENSPVAG00000016317) ATP1B2 (ENSPVAG00000016314) SHBG (ENSPVAG00000016310) SAT2 (ENSPVAG00000016309) ##22 FXR2 (ENSPVAG00000016306) SOX15 (ENSPVAG00000016305) ENSPVAG00000016301 CD68 (ENSPVAG00000016300) EIF4A1 (ENSPVAG00000016297) SENP3 (ENSPVAG00000016296) ENSPVAG00000016294 Equus ANCESTRAL SPECIES 31 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00950000183608 Donkey MODERN SPECIES 4 GUCY2D (ENSEASG00005019436) CNTROB (ENSEASG00005019398) TRAPPC1 (ENSEASG00005019386) KCNAB3 (ENSEASG00005019374) RNF227 (ENSEASG00005019369) CHD3 (ENSEASG00005019360) ENSEASG00005036107 CYB5D1 (ENSEASG00005031941) TMEM88 (ENSEASG00005019354) ENSEASG00005019348 DNAH2 (ENSEASG00005019325) EFNB3 (ENSEASG00005029987) WRAP53 (ENSEASG00005019313) TP53 (ENSEASG00005019310) ATP1B2 (ENSEASG00005019306) SAT2 (ENSEASG00005031940) ##22 FXR2 (ENSEASG00005019301) SOX15 (ENSEASG00005019300) ENSEASG00005026250 CD68 (ENSEASG00005019285) EIF4A1 (ENSEASG00005019235) SENP3 (ENSEASG00005019220) TNFSF13 (ENSEASG00005019214) TNFSF12 (ENSEASG00005035905) POLR2A (ENSEASG00005019114) ENSEASG00005034057 ZBTB4 (ENSEASG00005034523) CHRNB1 (ENSEASG00005019088) FGF11 (ENSEASG00005024525) TMEM102 (ENSEASG00005019080) ENSEASG00005019083 Horse MODERN SPECIES 2 ALOX15B (ENSECAG00000012112) GUCY2D (ENSECAG00000011645) CNTROB (ENSECAG00000011460) TRAPPC1 (ENSECAG00000011346) KCNAB3 (ENSECAG00000011019) CHD3 (ENSECAG00000010051) RNF227 (ENSECAG00000052544) NAA38 (ENSECAG00000051980) TMEM88 (ENSECAG00000009956) KDM6B (ENSECAG00000009828) EFNB3 (ENSECAG00000008360) DNAH2 (ENSECAG00000008405) TP53 (ENSECAG00000008126) ATP1B2 (ENSECAG00000007919) SHBG (ENSECAG00000046051) SAT2 (ENSECAG00000007716) ##22 FXR2 (ENSECAG00000007051) CD68 (ENSECAG00000002186) EIF4A1 (ENSECAG00000021478) SENP3 (ENSECAG00000020871) TNFSF13 (ENSECAG00000034840) TNFSF12 (ENSECAG00000059252) POLR2A (ENSECAG00000018485) ENSECAG00000018464 ZBTB4 (ENSECAG00000018353) CHRNB1 (ENSECAG00000018244) TMEM102 (ENSECAG00000017412) FGF11 (ENSECAG00000017426) SPEM2 (ENSECAG00000003006) TMEM256 (ENSECAG00000059628) NLGN2 (ENSECAG00000016513) Artiodactyla ANCESTRAL SPECIES 4 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Suina ANCESTRAL SPECIES ENSGT00940000161326 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Chacoan peccary MODERN SPECIES 67 ENSCWAG00000000005 EFNB3 (ENSCWAG00000004593) WRAP53 (ENSCWAG00000004521) TP53 (ENSCWAG00000004451) ATP1B2 (ENSCWAG00000004409) SAT2 (ENSCWAG00000004358) ##22 FXR2 (ENSCWAG00000004314) SOX15 (ENSCWAG00000004275) MPDU1 (ENSCWAG00000004250) ENSCWAG00000004172 EIF4A1 (ENSCWAG00000004092) SENP3 (ENSCWAG00000004036) TNFSF13 (ENSCWAG00000003798) POLR2A (ENSCWAG00000003754) ENSCWAG00000003732 ZBTB4 (ENSCWAG00000003716) CHRNB1 (ENSCWAG00000003664) FGF11 (ENSCWAG00000003645) TMEM102 (ENSCWAG00000003640) SPEM2 (ENSCWAG00000003617) SPEM1 (ENSCWAG00000003610) Pig MODERN SPECIES 3 ALOX15B (ENSSSCG00000017978) GUCY2D (ENSSSCG00000025345) CNTROB (ENSSSCG00000017968) KCNAB3 (ENSSSCG00000037973) RNF227 (ENSSSCG00000023166) CHD3 (ENSSSCG00000021363) CYB5D1 (ENSSSCG00000059632) ENSSSCG00000017971 TMEM88 (ENSSSCG00000037096) KDM6B (ENSSSCG00000017962) DNAH2 (ENSSSCG00000017963) EFNB3 (ENSSSCG00000017948) WRAP53 (ENSSSCG00000017949) TP53 (ENSSSCG00000017950) ATP1B2 (ENSSSCG00000017951) SAT2 (ENSSSCG00000017952) ##22 FXR2 (ENSSSCG00000017953) MPDU1 (ENSSSCG00000017955) CD68 (ENSSSCG00000017956) EIF4A1 (ENSSSCG00000017957) TNFSF13 (ENSSSCG00000036521) TNFSF12 (ENSSSCG00000040188) POLR2A (ENSSSCG00000028278) ENSSSCG00000021258 SENP3 (ENSSSCG00000032469) ENSSSCG00000046700 CHRNB1 (ENSSSCG00000056826) FGF11 (ENSSSCG00000051794) ENSSSCG00000058172 TMEM102 (ENSSSCG00000028725) SPEM2 (ENSSSCG00000024584) Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Cetacea ANCESTRAL SPECIES 5 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00950000183608 Blue whale MODERN SPECIES 12 KCNAB3 (ENSBMSG00010016300) RNF227 (ENSBMSG00010016286) CHD3 (ENSBMSG00010015969) CYB5D1 (ENSBMSG00010015944) ENSBMSG00010015700 TMEM88 (ENSBMSG00010015664) KDM6B (ENSBMSG00010015645) DNAH2 (ENSBMSG00010015276) EFNB3 (ENSBMSG00010015210) WRAP53 (ENSBMSG00010015133) TP53 (ENSBMSG00010015103) ATP1B2 (ENSBMSG00010015043) SHBG (ENSBMSG00010014909) ENSBMSG00010014775 ENSBMSG00010014736 SAT2 (ENSBMSG00010014690) ##22 FXR2 (ENSBMSG00010014611) SOX15 (ENSBMSG00010014575) MPDU1 (ENSBMSG00010014542) CD68 (ENSBMSG00010014507) SENP3 (ENSBMSG00010014371) ENSBMSG00010014024 ENSBMSG00010013958 POLR2A (ENSBMSG00010013868) ENSBMSG00010013827 ZBTB4 (ENSBMSG00010013806) ENSBMSG00010021972 ENSBMSG00010021964 TMEM102 (ENSBMSG00010021957) SPEM2 (ENSBMSG00010021951) SPEM1 (ENSBMSG00010021944) Odontoceti ANCESTRAL SPECIES 17 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582.j ENSGT00390000018418.d ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661.c.a ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00950000183608 Sperm whale MODERN SPECIES 865 SHBG (ENSPCTG00005018758) SAT2 (ENSPCTG00005019401) ##22 FXR2 (ENSPCTG00005019504) SOX15 (ENSPCTG00005019543) MPDU1 (ENSPCTG00005019574) CD68 (ENSPCTG00005019631) EIF4A1 (ENSPCTG00005019745) Odontoceti_a ANCESTRAL SPECIES 18 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582.j ENSGT00390000018418.d ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661.c.a ENSGT00940000158058 ENSGT00510000049389 ENSGT00940000160598.q Odontoceti_b ANCESTRAL SPECIES 20 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582.j ENSGT00390000018418.d ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661.c.a ENSGT00940000158058.k.a ENSGT01050000244976.b.b.b.a.a.a.a.a ENSGT00950000183608 Monodontidae ANCESTRAL SPECIES 21 ENSGT00940000161326 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00940000158001 ENSGT00440000037582.j ENSGT00390000018418.d ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00940000164775 ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661.d.b ENSGT00940000158058.k.a ENSGT01050000244976.b.b.b.a.a.a.a.a ENSGT00950000183608 Narwhal MODERN SPECIES 316 GUCY2D (ENSMMNG00015021239) CNTROB (ENSMMNG00015021276) TRAPPC1 (ENSMMNG00015021316) KCNAB3 (ENSMMNG00015021334) CHD3 (ENSMMNG00015021409) ENSMMNG00015021486 CYB5D1 (ENSMMNG00015021498) TMEM88 (ENSMMNG00015021511) KDM6B (ENSMMNG00015021524) DNAH2 (ENSMMNG00015021587) EFNB3 (ENSMMNG00015016009) WRAP53 (ENSMMNG00015016083) TP53 (ENSMMNG00015016161) ATP1B2 (ENSMMNG00015016318) SHBG (ENSMMNG00015016387) SAT2 (ENSMMNG00015016481) ##22 FXR2 (ENSMMNG00015016533) MPDU1 (ENSMMNG00015016603) SOX15 (ENSMMNG00015016727) ENSMMNG00015016759 EIF4A1 (ENSMMNG00015016818) SENP3 (ENSMMNG00015016888) TNFSF13 (ENSMMNG00015016945) TNFSF12 (ENSMMNG00015017065) ENSMMNG00015017127 POLR2A (ENSMMNG00015017161) ENSMMNG00015017226 ZBTB4 (ENSMMNG00015017253) ENSMMNG00015017276 ENSMMNG00015017297 ENSMMNG00015017339 Dolphin MODERN SPECIES 1363 GUCY2D (ENSTTRG00000010309) CNTROB (ENSTTRG00000010307) TRAPPC1 (ENSTTRG00000010306) KCNAB3 (ENSTTRG00000010304) ENSTTRG00000010303 CHD3 (ENSTTRG00000010295) CYB5D1 (ENSTTRG00000010293) TMEM88 (ENSTTRG00000010291) KDM6B (ENSTTRG00000010285) DNAH2 (ENSTTRG00000010261) EFNB3 (ENSTTRG00000010258) WRAP53 (ENSTTRG00000010253) TP53 (ENSTTRG00000010250) ATP1B2 (ENSTTRG00000010247) SHBG (ENSTTRG00000010243) SAT2 (ENSTTRG00000010238) ##22 FXR2 (ENSTTRG00000010231) SOX15 (ENSTTRG00000010225) MPDU1 (ENSTTRG00000010221) ENSTTRG00000010216 EIF4A1 (ENSTTRG00000010208) SENP3 (ENSTTRG00000010205) TNFSF13 (ENSTTRG00000010198) Pecora ANCESTRAL SPECIES 1 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Percora_a ANCESTRAL SPECIES 2 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A.h ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Bovidae ANCESTRAL SPECIES 2 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A.h ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Caprinae ANCESTRAL SPECIES 1 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A.h ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00950000183608 Rambouillet Sheep MODERN SPECIES 2 CNTROB (ENSOARG00020023412) TRAPPC1 (ENSOARG00020023446) KCNAB3 (ENSOARG00020023471) RNF227 (ENSOARG00020023509) CHD3 (ENSOARG00020023540) CYB5D1 (ENSOARG00020009989) NAA38 (ENSOARG00020010108) TMEM88 (ENSOARG00020010194) KDM6B (ENSOARG00020010242) DNAH2 (ENSOARG00020010512) EFNB3 (ENSOARG00020011424) WRAP53 (ENSOARG00020011477) TP53 (ENSOARG00020011609) ATP1B2 (ENSOARG00020011738) SHBG (ENSOARG00020011830) SAT2 (ENSOARG00020012041) ##22 FXR2 (ENSOARG00020012154) MPDU1 (ENSOARG00020012323) SOX15 (ENSOARG00020012722) CD68 (ENSOARG00020012774) EIF4A1 (ENSOARG00020012888) SENP3 (ENSOARG00020013096) TNFSF13 (ENSOARG00020013222) TNFSF12 (ENSOARG00020013736) POLR2A (ENSOARG00020013804) ENSOARG00020014181 ZBTB4 (ENSOARG00020014211) CHRNB1 (ENSOARG00020014250) FGF11 (ENSOARG00020014550) TMEM102 (ENSOARG00020014630) ENSOARG00020014662 Goat MODERN SPECIES 10 GUCY2D (ENSCHIG00000014967) CNTROB (ENSCHIG00000023991) TRAPPC1 (ENSCHIG00000013736) KCNAB3 (ENSCHIG00000011995) RNF227 (ENSCHIG00000009394) CHD3 (ENSCHIG00000016737) CYB5D1 (ENSCHIG00000012741) NAA38 (ENSCHIG00000023618) TMEM88 (ENSCHIG00000017315) KDM6B (ENSCHIG00000017251) DNAH2 (ENSCHIG00000018276) EFNB3 (ENSCHIG00000027243) WRAP53 (ENSCHIG00000015730) TP53 (ENSCHIG00000025000) ATP1B2 (ENSCHIG00000022273) SAT2 (ENSCHIG00000008642) ##22 SHBG (ENSCHIG00000019887) FXR2 (ENSCHIG00000004007) SOX15 (ENSCHIG00000023104) MPDU1 (ENSCHIG00000019131) CD68 (ENSCHIG00000023275) EIF4A1 (ENSCHIG00000022153) SENP3 (ENSCHIG00000013302) TNFSF13 (ENSCHIG00000019003) TNFSF12 (ENSCHIG00000000561) POLR2A (ENSCHIG00000027173) ENSCHIG00000025830 ZBTB4 (ENSCHIG00000008943) CHRNB1 (ENSCHIG00000014506) FGF11 (ENSCHIG00000007435) TMEM102 (ENSCHIG00000014552) Bovinae ANCESTRAL SPECIES ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A.h ENSGT00940000161488 ENSGT00940000163167.e ENSGT00940000163167.f ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 Bos ANCESTRAL SPECIES 1 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A.h ENSGT00940000161488 ENSGT00940000163167.e ENSGT00940000163167.f ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 Bos_b ANCESTRAL SPECIES 15 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A.h ENSGT00940000161488 ENSGT00940000163167.e ENSGT00940000163167.f ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Hybrid Bos Indicus MODERN SPECIES 10 CNTROB (ENSBIXG00005007207) TRAPPC1 (ENSBIXG00005003419) KCNAB3 (ENSBIXG00005020380) RNF227 (ENSBIXG00005020408) CHD3 (ENSBIXG00005020807) NAA38 (ENSBIXG00005003526) CYB5D1 (ENSBIXG00005020864) TMEM88 (ENSBIXG00005020886) KDM6B (ENSBIXG00005020932) DNAH2 (ENSBIXG00005021869) EFNB3 (ENSBIXG00005021928) WRAP53 (ENSBIXG00005022042) TP53 (ENSBIXG00005022080) ATP1B2 (ENSBIXG00005022109) SHBG (ENSBIXG00005022236) SAT2 (ENSBIXG00005022291) ##22 FXR2 (ENSBIXG00005022344) SOX15 (ENSBIXG00005022393) MPDU1 (ENSBIXG00005022416) CD68 (ENSBIXG00005022432) EIF4A1 (ENSBIXG00005022521) ENSBIXG00005003849 TNFSF13 (ENSBIXG00005022699) ENSBIXG00005022739 ENSBIXG00005022874 POLR2A (ENSBIXG00005022938) ENSBIXG00005022983 ZBTB4 (ENSBIXG00005023002) CHRNB1 (ENSBIXG00005023090) ENSBIXG00005003940 TMEM102 (ENSBIXG00005007617) Cow MODERN SPECIES 10 CNTROB (ENSBTAG00000047756) TRAPPC1 (ENSBTAG00000047214) KCNAB3 (ENSBTAG00000014940) RNF227 (ENSBTAG00000051381) CHD3 (ENSBTAG00000014377) CYB5D1 (ENSBTAG00000051958) NAA38 (ENSBTAG00000014695) TMEM88 (ENSBTAG00000014693) KDM6B (ENSBTAG00000048062) DNAH2 (ENSBTAG00000008605) EFNB3 (ENSBTAG00000052025) WRAP53 (ENSBTAG00000001071) TP53 (ENSBTAG00000001069) ATP1B2 (ENSBTAG00000013680) SHBG (ENSBTAG00000004226) SAT2 (ENSBTAG00000004222) ##22 FXR2 (ENSBTAG00000005462) SOX15 (ENSBTAG00000005461) MPDU1 (ENSBTAG00000000134) CD68 (ENSBTAG00000000133) EIF4A1 (ENSBTAG00000000132) SENP3 (ENSBTAG00000000131) TNFSF13 (ENSBTAG00000000130) TNFSF12 (ENSBTAG00000031725) ENSBTAG00000053047 POLR2A (ENSBTAG00000046765) ZBTB4 (ENSBTAG00000008289) CHRNB1 (ENSBTAG00000019242) ENSBTAG00000050569 TMEM102 (ENSBTAG00000031737) SPEM2 (ENSBTAG00000048416) Bos_a ANCESTRAL SPECIES ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00940000166612 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A.h ENSGT00940000161488 ENSGT00940000163167.f ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00950000183608 ENSGT01050000244976.b.b.b.a.a.a Domestic yak MODERN SPECIES 10 GUCY2D (ENSBGRG00000026745) CNTROB (ENSBGRG00000026747) TRAPPC1 (ENSBGRG00000026750) KCNAB3 (ENSBGRG00000026751) CHD3 (ENSBGRG00000026756) CYB5D1 (ENSBGRG00000010801) NAA38 (ENSBGRG00000010936) TMEM88 (ENSBGRG00000011023) KDM6B (ENSBGRG00000011083) DNAH2 (ENSBGRG00000011513) EFNB3 (ENSBGRG00000013255) WRAP53 (ENSBGRG00000013328) TP53 (ENSBGRG00000013504) ATP1B2 (ENSBGRG00000013707) SHBG (ENSBGRG00000013830) SAT2 (ENSBGRG00000014643) ##22 FXR2 (ENSBGRG00000014808) SOX15 (ENSBGRG00000015270) MPDU1 (ENSBGRG00000015329) CD68 (ENSBGRG00000015552) EIF4A1 (ENSBGRG00000015731) ENSBGRG00000016131 TNFSF13 (ENSBGRG00000016192) TNFSF12 (ENSBGRG00000016640) POLR2A (ENSBGRG00000016762) ENSBGRG00000018813 ENSBGRG00000018851 CHRNB1 (ENSBGRG00000018985) FGF11 (ENSBGRG00000019230) ENSBGRG00000019344 TMEM102 (ENSBGRG00000019375) Wild yak MODERN SPECIES 680 ENSBMUG00000021898 DNAH2 (ENSBMUG00000021802) EFNB3 (ENSBMUG00000021677) WRAP53 (ENSBMUG00000021653) TP53 (ENSBMUG00000021612) ATP1B2 (ENSBMUG00000021597) SHBG (ENSBMUG00000021535) SAT2 (ENSBMUG00000021464) ##22 FXR2 (ENSBMUG00000021449) SOX15 (ENSBMUG00000021435) ENSBMUG00000021432 CD68 (ENSBMUG00000021412) EIF4A1 (ENSBMUG00000021378) SENP3 (ENSBMUG00000021344) TNFSF13 (ENSBMUG00000021319) American bison MODERN SPECIES 3101 ENSBBBG00000012428 CNTROB (ENSBBBG00000001885) TRAPPC1 (ENSBBBG00000012401) KCNAB3 (ENSBBBG00000012395) RNF227 (ENSBBBG00000012386) CHD3 (ENSBBBG00000012374) CYB5D1 (ENSBBBG00000012250) NAA38 (ENSBBBG00000012243) TMEM88 (ENSBBBG00000012238) DNAH2 (ENSBBBG00000012222) EFNB3 (ENSBBBG00000001957) WRAP53 (ENSBBBG00000012081) TP53 (ENSBBBG00000012045) ATP1B2 (ENSBBBG00000011978) SHBG (ENSBBBG00000011965) SAT2 (ENSBBBG00000002207) ##22 FXR2 (ENSBBBG00000011852) SOX15 (ENSBBBG00000011837) MPDU1 (ENSBBBG00000011831) CD68 (ENSBBBG00000011808) EIF4A1 (ENSBBBG00000011799) SENP3 (ENSBBBG00000011747) TNFSF13 (ENSBBBG00000011734) ENSBBBG00000011694 ENSBBBG00000011689 Siberian musk deer MODERN SPECIES 186 CNTROB (ENSMMSG00000015879) TRAPPC1 (ENSMMSG00000015846) KCNAB3 (ENSMMSG00000015811) RNF227 (ENSMMSG00000015787) CHD3 (ENSMMSG00000015421) CYB5D1 (ENSMMSG00000015342) NAA38 (ENSMMSG00000015308) TMEM88 (ENSMMSG00000015296) KDM6B (ENSMMSG00000015220) DNAH2 (ENSMMSG00000014788) EFNB3 (ENSMMSG00000014754) WRAP53 (ENSMMSG00000014723) TP53 (ENSMMSG00000019953) ATP1B2 (ENSMMSG00000019916) SHBG (ENSMMSG00000019755) SAT2 (ENSMMSG00000019706) ##22 FXR2 (ENSMMSG00000019622) SOX15 (ENSMMSG00000019596) MPDU1 (ENSMMSG00000019573) CD68 (ENSMMSG00000019526) EIF4A1 (ENSMMSG00000019285) SENP3 (ENSMMSG00000019230) TNFSF13 (ENSMMSG00000018842) ENSMMSG00000018798 ENSMMSG00000018762 Yarkand deer MODERN SPECIES 28 ENSCHYG00000014305 ENSCHYG00000014238 KCNAB3 (ENSCHYG00000014047) RNF227 (ENSCHYG00000013986) CYB5D1 (ENSCHYG00000013871) NAA38 (ENSCHYG00000013759) TMEM88 (ENSCHYG00000013718) KDM6B (ENSCHYG00000013585) CHD3 (ENSCHYG00000012831) DNAH2 (ENSCHYG00000012149) ENSCHYG00000011626 TP53 (ENSCHYG00000011475) ATP1B2 (ENSCHYG00000011403) ENSCHYG00000011360 SHBG (ENSCHYG00000011068) SAT2 (ENSCHYG00000010916) ##22 FXR2 (ENSCHYG00000010582) SOX15 (ENSCHYG00000010516) MPDU1 (ENSCHYG00000010340) ENSCHYG00000010254 SENP3 (ENSCHYG00000009975) TNFSF13 (ENSCHYG00000009384) ENSCHYG00000009243 POLR2A (ENSCHYG00000008818) ENSCHYG00000008765 ZBTB4 (ENSCHYG00000008714) CHRNB1 (ENSCHYG00000008632) FGF11 (ENSCHYG00000008566) ENSCHYG00000008554 TMEM102 (ENSCHYG00000008540) SPEM2 (ENSCHYG00000008464) Atlantogenata ANCESTRAL SPECIES 37 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 ENSGT00510000049389 Afrotheria ANCESTRAL SPECIES 27 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00940000166612 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 ENSGT00510000049389 Tenrec MODERN SPECIES 3762 ENSETEG00000017778 SAT2 (ENSETEG00000017773) ##22 Afrotheria_a ANCESTRAL SPECIES 27 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00940000166612 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 ENSGT00510000049389 Hyrax MODERN SPECIES 4442 ENSPCAG00000013334 SAT2 (ENSPCAG00000013271) ##22 FXR2 (ENSPCAG00000013184) SOX15 (ENSPCAG00000013154) MPDU1 (ENSPCAG00000013065) CD68 (ENSPCAG00000013019) EIF4A1 (ENSPCAG00000012966) SENP3 (ENSPCAG00000012906) ENSPCAG00000012847 Xenarthra ANCESTRAL SPECIES 105 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000162099 ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889.e.a.b ENSGT00940000156309.A ENSGT00940000161488 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00940000160598 ENSGT00390000000334 Armadillo MODERN SPECIES 2560 ENSDNOG00000049478 EFNB3 (ENSDNOG00000036893) WRAP53 (ENSDNOG00000024614) TP53 (ENSDNOG00000005252) ATP1B2 (ENSDNOG00000037565) SHBG (ENSDNOG00000025591) SAT2 (ENSDNOG00000047965) ##22 FXR2 (ENSDNOG00000001047) ENSDNOG00000004931 MPDU1 (ENSDNOG00000040929) CD68 (ENSDNOG00000019028) EIF4A1 (ENSDNOG00000044619) SENP3 (ENSDNOG00000046769) ENSDNOG00000015264 POLR2A (ENSDNOG00000016482) ENSDNOG00000030841 ZBTB4 (ENSDNOG00000034417) CHRNB1 (ENSDNOG00000039322) FGF11 (ENSDNOG00000039158) TMEM102 (ENSDNOG00000039072) ENSDNOG00000048274 TMEM256 (ENSDNOG00000045750) Marsupialia ANCESTRAL SPECIES 22 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889 ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 ENSGT00940000160598 Opossum MODERN SPECIES 1 ALOXE3 (ENSMODG00000007698) ALOX12B (ENSMODG00000007663) GUCY2D (ENSMODG00000007621) CNTROB (ENSMODG00000007585) TRAPPC1 (ENSMODG00000007560) KCNAB3 (ENSMODG00000007554) RNF227 (ENSMODG00000042746) CHD3 (ENSMODG00000007509) CYB5D1 (ENSMODG00000040030) NAA38 (ENSMODG00000007434) DNAH2 (ENSMODG00000007423) EFNB3 (ENSMODG00000044247) ENSMODG00000007363 ATP1B2 (ENSMODG00000007264) ENSMODG00000040212 SAT2 (ENSMODG00000007208) ##22 FXR2 (ENSMODG00000007179) MPDU1 (ENSMODG00000044486) ENSMODG00000007113 ENSMODG00000007090 SENP3 (ENSMODG00000007067) TNFSF13 (ENSMODG00000025682) TNFSF12 (ENSMODG00000007036) POLR2A (ENSMODG00000007009) ZBTB4 (ENSMODG00000006962) CHRNB1 (ENSMODG00000006951) FGF11 (ENSMODG00000006934) TMEM102 (ENSMODG00000006926) ENSMODG00000049809 ENSMODG00000006922 PLSCR3 (ENSMODG00000006876) Marsupialia_b ANCESTRAL SPECIES 25 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889 ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00510000049558 ENSGT00940000160598 Diprotodontia ANCESTRAL SPECIES 38 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889 ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT01050000244976.b.b.b.a.a.a ENSGT00970000197553 ENSGT00940000170600 Diprotodontia_a ANCESTRAL SPECIES 37 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 ENSGT00390000002475 ENSGT00940000158001 ENSGT00440000037582 ENSGT00390000018418 ENSGT00940000162021 ENSGT00940000160414 ENSGT00940000157623 ENSGT00940000160323.b ENSGT00390000010169 ENSGT00950000183153.c.a ENSGT01030000234579.A.a ENSGT00940000154035.a ENSGT00950000183121.b.a ##22 ENSGT00950000183189.a.a ENSGT00940000153916.A ENSGT00950000182899.C.b ENSGT00940000153889 ENSGT00940000156309.A ENSGT00940000161488 ENSGT00940000163167 ENSGT00930000151033 ENSGT00940000153249.b.c ENSGT00940000161268 ENSGT00940000158661 ENSGT00940000158058 ENSGT00970000197553 ENSGT00940000170600 ENSGT00940000160598 koala MODERN SPECIES 167 CNTROB (ENSPCIG00000023797) TRAPPC1 (ENSPCIG00000023794) KCNAB3 (ENSPCIG00000023786) RNF227 (ENSPCIG00000023784) CHD3 (ENSPCIG00000005442) ENSPCIG00000004483 CYB5D1 (ENSPCIG00000004490) TMEM88 (ENSPCIG00000004477) KDM6B (ENSPCIG00000004435) DNAH2 (ENSPCIG00000004365) EFNB3 (ENSPCIG00000004350) WRAP53 (ENSPCIG00000004299) TP53 (ENSPCIG00000028990) ATP1B2 (ENSPCIG00000028988) ENSPCIG00000028986 SAT2 (ENSPCIG00000028983) ##22 FXR2 (ENSPCIG00000028979) MPDU1 (ENSPCIG00000028978) CD68 (ENSPCIG00000028977) EIF4A1 (ENSPCIG00000028856) SENP3 (ENSPCIG00000028854) TNFSF13 (ENSPCIG00000032623) TNFSF12 (ENSPCIG00000028852) POLR2A (ENSPCIG00000028851) ENSPCIG00000028850 ENSPCIG00000035000 CHRNB1 (ENSPCIG00000028848) FGF11 (ENSPCIG00000028847) ENSPCIG00000028846 ENSPCIG00000034217 NLGN2 (ENSPCIG00000028840) Common wonbat MODERN SPECIES 746 GUCY2D (ENSVURG00010003895) CNTROB (ENSVURG00010003884) TRAPPC1 (ENSVURG00010003857) KCNAB3 (ENSVURG00010003835) CHD3 (ENSVURG00010003787) CYB5D1 (ENSVURG00010003753) NAA38 (ENSVURG00010003740) TMEM88 (ENSVURG00010003737) KDM6B (ENSVURG00010003672) DNAH2 (ENSVURG00010003479) EFNB3 (ENSVURG00010003454) WRAP53 (ENSVURG00010003424) TP53 (ENSVURG00010003410) ATP1B2 (ENSVURG00010003402) SHBG (ENSVURG00010003244) SAT2 (ENSVURG00010003204) ##22 FXR2 (ENSVURG00010003184) MPDU1 (ENSVURG00010003164) ENSVURG00010003153 EIF4A1 (ENSVURG00010003121) ENSVURG00010003109 TNFSF13 (ENSVURG00010003085) TNFSF12 (ENSVURG00010003074) POLR2A (ENSVURG00010003044) ENSVURG00010003028 ZBTB4 (ENSVURG00010003009) CHRNB1 (ENSVURG00010002988) FGF11 (ENSVURG00010002946) ENSVURG00010002926 TMEM102 (ENSVURG00010002920) NLGN2 (ENSVURG00010002903) Wallaby MODERN SPECIES 4890 ENSMEUG00000004943 SAT2 (ENSMEUG00000004925) ##22 Tasmanian devil MODERN SPECIES 3 ALOX15B (ENSSHAG00000013773) GUCY2D (ENSSHAG00000013941) CNTROB (ENSSHAG00000014180) TRAPPC1 (ENSSHAG00000022086) KCNAB3 (ENSSHAG00000027781) RNF227 (ENSSHAG00000031131) CHD3 (ENSSHAG00000014412) CYB5D1 (ENSSHAG00000021645) NAA38 (ENSSHAG00000028290) TMEM88 (ENSSHAG00000022675) KDM6B (ENSSHAG00000014694) EFNB3 (ENSSHAG00000015360) WRAP53 (ENSSHAG00000015380) TP53 (ENSSHAG00000015510) ATP1B2 (ENSSHAG00000015530) SAT2 (ENSSHAG00000015589) ##22 FXR2 (ENSSHAG00000015678) MPDU1 (ENSSHAG00000023388) CD68 (ENSSHAG00000015749) SENP3 (ENSSHAG00000015773) TNFSF12 (ENSSHAG00000026832) EIF4A1 (ENSSHAG00000025908) POLR2A (ENSSHAG00000002858) ZBTB4 (ENSSHAG00000027974) CHRNB1 (ENSSHAG00000009163) ENSSHAG00000028446 TMEM102 (ENSSHAG00000004346) ENSSHAG00000004553 NLGN2 (ENSSHAG00000024935) TMEM256 (ENSSHAG00000030265) PLSCR3 (ENSSHAG00000005753) Platypus MODERN SPECIES 88 CNTROB (ENSOANG00000039082) ENSOANG00000014378 KCNAB3 (ENSOANG00000011684) RNF227 (ENSOANG00000047566) ENSOANG00000040863 ENSOANG00000048406 ENSOANG00000051342 NAA38 (ENSOANG00000050971) ENSOANG00000049653 ENSOANG00000045211 EFNB3 (ENSOANG00000036033) WRAP53 (ENSOANG00000008865) ENSOANG00000050103 ATP1B2 (ENSOANG00000044182) ENSOANG00000038617 SAT2 (ENSOANG00000048805) ##22 FXR2 (ENSOANG00000036936) ENSOANG00000048007 MPDU1 (ENSOANG00000042200) ENSOANG00000037792 EIF4A1 (ENSOANG00000050686) ENSOANG00000047493 ENSOANG00000003303 ENSOANG00000048789 ENSOANG00000036766 ENSOANG00000049743 ENSOANG00000007203 ENSOANG00000040838 ENSOANG00000002509 NLGN2 (ENSOANG00000038162) TMEM256 (ENSOANG00000048373) Anura DUPLICATION Anura ANCESTRAL SPECIES 578 ENSGT00950000183121.a.a.a ##22 ENSGT00950000183121.b.a.c ##22 Frog MODERN SPECIES 3 ephb4 (ENSXETG00000011170) sox15 (ENSXETG00000049010) ENSXETG00000044372 mpdu1 (ENSXETG00000049310) ENSXETG00000042560 ENSXETG00000038530 omp (ENSXETG00000020127) eif4a1 (ENSXETG00000020123) senp3 (ENSXETG00000043732) ENSXETG00000042866 nlgn2 (ENSXETG00000044356) ENSXETG00000045775 tmem102 (ENSXETG00000039616) ENSXETG00000047389 ENSXETG00000046182 ##22 sat2 (ENSXETG00000036942) ##22 ENSXETG00000047173 ENSXETG00000043929 ##22 XB5717875 [provisional:plac8] (ENSXETG00000030771) ENSXETG00000048095 ENSXETG00000046762 ENSXETG00000047242 ENSXETG00000048992 ENSXETG00000046951 ENSXETG00000047633 or1s1 (ENSXETG00000045394) ENSXETG00000048316 XB5946328 [provisional:or11l1] (ENSXETG00000041979) ENSXETG00000041571 ENSXETG00000035305 ENSXETG00000044730 Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000001780 ENSLLEG00000001970 MEPCE (ENSLLEG00000002007) TFR2 (ENSLLEG00000002056) ENSLLEG00000002093 ENSLLEG00000002155 ENSLLEG00000002181 ENSLLEG00000002262 ENSLLEG00000002367 POP7 (ENSLLEG00000002377) GIGYF1 (ENSLLEG00000002482) EPHB4 (ENSLLEG00000002871) ENSLLEG00000002916 ENSLLEG00000002928 ENSLLEG00000002946 ##22 ENSLLEG00000002979 ##22 ENSLLEG00000003044 ENSLLEG00000003074 ENSLLEG00000003114 ENSLLEG00000003158 ENSLLEG00000003165 ENSLLEG00000003172 ENSLLEG00000003185 ENSLLEG00000003232 ENSLLEG00000003288 ENSLLEG00000003312 ENSLLEG00000003331 ENSLLEG00000003342 ENSLLEG00000003363 ENSLLEG00000003369 ENSLLEG00000003416 Anura ANCESTRAL SPECIES ENSGT00950000183121.b.a.d ##22 Frog MODERN SPECIES 3 ENSXETG00000044372 mpdu1 (ENSXETG00000049310) ENSXETG00000042560 ENSXETG00000038530 omp (ENSXETG00000020127) eif4a1 (ENSXETG00000020123) senp3 (ENSXETG00000043732) ENSXETG00000042866 nlgn2 (ENSXETG00000044356) ENSXETG00000045775 tmem102 (ENSXETG00000039616) ENSXETG00000047389 ENSXETG00000046182 ##22 sat2 (ENSXETG00000036942) ##22 ENSXETG00000047173 ENSXETG00000043929 ##22 XB5717875 [provisional:plac8] (ENSXETG00000030771) ENSXETG00000048095 ENSXETG00000046762 ENSXETG00000047242 ENSXETG00000048992 ENSXETG00000046951 ENSXETG00000047633 or1s1 (ENSXETG00000045394) ENSXETG00000048316 XB5946328 [provisional:or11l1] (ENSXETG00000041979) ENSXETG00000041571 ENSXETG00000035305 ENSXETG00000044730 ENSXETG00000042676 dvl2 (ENSXETG00000046940)