Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00900000143551
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00900000143551
Glires	ANCESTRAL SPECIES	21	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00900000143551
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00900000143551
Rodentia_B	ANCESTRAL SPECIES	42	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT01030000234518.C.a.a	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Myomorpha	ANCESTRAL SPECIES	51	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT01030000234518.C.a.a	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Muroidea	ANCESTRAL SPECIES	58	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT01030000234518.C.a.a	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1514							Shfl (ENSNGAG00000000044) #13	Angptl6 (ENSNGAG00000016395) #14	Ppan (ENSNGAG00000012813) #15	Eif3g (ENSNGAG00000012159) #16	Dnmt1 (ENSNGAG00000010277) #17	S1pr2 (ENSNGAG00000000186) #18	Mrpl4 (ENSNGAG00000014705) #19	Icam1 (ENSNGAG00000014166) #20	Icam4 (ENSNGAG00000001140) #21	Icam5 (ENSNGAG00000017094) #22	Zglp1 (ENSNGAG00000015996) #23	Fdx2 (ENSNGAG00000009605) #24	Raver1 (ENSNGAG00000001260) #25	Tyk2 (ENSNGAG00000003917) #26	Cdc37 (ENSNGAG00000017380) #27	Pde4a (ENSNGAG00000016357) #28	Keap1 (ENSNGAG00000012825) #29	S1pr5 (ENSNGAG00000011944) #30	Atg4d (ENSNGAG00000000291) #31	Kri1 (ENSNGAG00000000508) #32	Cdkn2d (ENSNGAG00000020636) #33	Ap1m2 (ENSNGAG00000013508) #34	Slc44a2 (ENSNGAG00000000063) #35	ENSNGAG00000009786 #36	Qtrt1 (ENSNGAG00000012294) #37
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT01030000234518.C.a.a	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT01030000234518.C.a.a	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Cricetinae	ANCESTRAL SPECIES	30	ENSGT00990000205479	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Chinese hamster chok1gshd	MODERN SPECIES	189	ENSCGRG00001022058	Pin1 (ENSCGRG00001024300)	Olfm2 (ENSCGRG00001009665)	Snrpd2 (ENSCGRG00001003078)	Col5a3 (ENSCGRG00001009491)	Rdh8 (ENSCGRG00001012909)	Shfl (ENSCGRG00001014258) #13	Angptl6 (ENSCGRG00001015238) #14	Ppan (ENSCGRG00001015990) #15	EIF3G (ENSCGRG00001017726) #16	Dnmt1 (ENSCGRG00001022275) #17	S1pr2 (ENSCGRG00001016552) #18	Mrpl4 (ENSCGRG00001013642) #19	Icam1 (ENSCGRG00001015045) #20	Icam4 (ENSCGRG00001018219) #21	Icam5 (ENSCGRG00001000449) #22	Zglp1 (ENSCGRG00001002376) #23	Fdx2 (ENSCGRG00001012584) #24	Raver1 (ENSCGRG00001013260) #25	Tyk2 (ENSCGRG00001016315) #26	ENSCGRG00001017764 #27	Pde4a (ENSCGRG00001014442) #28	Keap1 (ENSCGRG00001016562) #29	S1pr5 (ENSCGRG00001009679) #30	Atg4d (ENSCGRG00001017644) #31	Kri1 (ENSCGRG00001018764) #32	Cdkn2d (ENSCGRG00001019561) #33	Ap1m2 (ENSCGRG00001020691) #34	Slc44a2 (ENSCGRG00001014087) #35	Ilf3 (ENSCGRG00001021577) #36	Qtrt1 (ENSCGRG00001001152) #37
Golden Hamster	MODERN SPECIES	700	ENSMAUG00000002861	Ubl5 (ENSMAUG00000000997)	Pin1 (ENSMAUG00000000464)	Olfm2 (ENSMAUG00000006786)	Col5a3 (ENSMAUG00000006118)	ENSMAUG00000019806	Shfl (ENSMAUG00000017892) #13	Angptl6 (ENSMAUG00000005463) #14	Ppan (ENSMAUG00000000310) #15	Eif3g (ENSMAUG00000003373) #16	Dnmt1 (ENSMAUG00000019579) #17	S1pr2 (ENSMAUG00000016946) #18	Mrpl4 (ENSMAUG00000013451) #19	Icam1 (ENSMAUG00000006369) #20	Icam4 (ENSMAUG00000002833) #21	Icam5 (ENSMAUG00000001262) #22	Zglp1 (ENSMAUG00000000170) #23	Fdx2 (ENSMAUG00000016958) #24	Raver1 (ENSMAUG00000017948) #25	Tyk2 (ENSMAUG00000017865) #26	Cdc37 (ENSMAUG00000008486) #27	Pde4a (ENSMAUG00000013828) #28	Keap1 (ENSMAUG00000007914) #29	S1pr5 (ENSMAUG00000000259) #30	Atg4d (ENSMAUG00000020205) #31	Kri1 (ENSMAUG00000011484) #32	Cdkn2d (ENSMAUG00000001161) #33	Ap1m2 (ENSMAUG00000012894) #34	Slc44a2 (ENSMAUG00000010847) #35	Ilf3 (ENSMAUG00000020405) #36	Qtrt1 (ENSMAUG00000020794) #37
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT01030000234518.C.a.a	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Prairie vole	MODERN SPECIES	13	ENSMOCG00000019478	Pin1 (ENSMOCG00000004258)	Olfm2 (ENSMOCG00000007618)	Col5a3 (ENSMOCG00000004687)	Rdh8 (ENSMOCG00000004899)	Shfl (ENSMOCG00000012138) #13	Angptl6 (ENSMOCG00000012813) #14	Ppan (ENSMOCG00000016402) #15	ENSMOCG00000016861 #16	Dnmt1 (ENSMOCG00000013903) #17	S1pr2 (ENSMOCG00000013385) #18	Mrpl4 (ENSMOCG00000014755) #19	Icam1 (ENSMOCG00000013230) #20	ENSMOCG00000013950	Icam4 (ENSMOCG00000019163) #21	Icam5 (ENSMOCG00000002626) #22	Zglp1 (ENSMOCG00000011301) #23	Fdx2 (ENSMOCG00000014317) #24	Raver1 (ENSMOCG00000015553) #25	Tyk2 (ENSMOCG00000017994) #26	Cdc37 (ENSMOCG00000020700) #27	Pde4a (ENSMOCG00000007095) #28	Keap1 (ENSMOCG00000009445) #29	S1pr5 (ENSMOCG00000005836) #30	Atg4d (ENSMOCG00000002959) #31	Kri1 (ENSMOCG00000017013) #32	Cdkn2d (ENSMOCG00000016257) #33	Ap1m2 (ENSMOCG00000000638) #34	Slc44a2 (ENSMOCG00000014267) #35	Ilf3 (ENSMOCG00000018740) #36	Qtrt1 (ENSMOCG00000019584) #37
Northern American deer mouse	MODERN SPECIES	20	ENSPEMG00000018867	Pin1 (ENSPEMG00000002291)	Olfm2 (ENSPEMG00000005546)	Col5a3 (ENSPEMG00000015543)	Rdh8 (ENSPEMG00000015325)	Shfl (ENSPEMG00000013975) #13	Angptl6 (ENSPEMG00000010885) #14	ENSPEMG00000029942	Ppan (ENSPEMG00000015393) #15	Eif3g (ENSPEMG00000001978) #16	ENSPEMG00000004880 #17	S1pr2 (ENSPEMG00000030885) #18	Mrpl4 (ENSPEMG00000017474) #19	Icam1 (ENSPEMG00000024025) #20	Icam4 (ENSPEMG00000023979) #21	Icam5 (ENSPEMG00000008387) #22	Zglp1 (ENSPEMG00000023438) #23	Fdx2 (ENSPEMG00000023101) #24	Raver1 (ENSPEMG00000016411) #25	Tyk2 (ENSPEMG00000011071) #26	Cdc37 (ENSPEMG00000023710) #27	Pde4a (ENSPEMG00000023071) #28	Keap1 (ENSPEMG00000022907) #29	S1pr5 (ENSPEMG00000015460) #30	Atg4d (ENSPEMG00000004633) #31	Kri1 (ENSPEMG00000024201) #32	Cdkn2d (ENSPEMG00000030087) #33	Ap1m2 (ENSPEMG00000023352) #34	Slc44a2 (ENSPEMG00000008320) #35	ENSPEMG00000000465 #36	Qtrt1 (ENSPEMG00000009897) #37
Murinae	ANCESTRAL SPECIES	3	ENSGT00390000003354	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Mus	ANCESTRAL SPECIES	4	ENSGT00390000003354	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000003354	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000003354	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143.c #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Mouse	MODERN SPECIES	18	Fbxl12 (ENSMUSG00000066892)	Ubl5 (ENSMUSG00000084786)	Pin1 (ENSMUSG00000032171)	Olfm2 (ENSMUSG00000032172)	Col5a3 (ENSMUSG00000004098)	Rdh8 (ENSMUSG00000053773)	Shfl (ENSMUSG00000038884) #13	Angptl6 (ENSMUSG00000038742) #14	Ppan (ENSMUSG00000004100) #15	Eif3g (ENSMUSG00000070319) #16	Dnmt1 (ENSMUSG00000004099) #17	S1pr2 (ENSMUSG00000043895) #18	Mrpl4 (ENSMUSG00000003299) #19	Icam1 (ENSMUSG00000037405) #20	Icam4 (ENSMUSG00000001014) #21	Icam5 (ENSMUSG00000032174) #22	Zglp1 (ENSMUSG00000079681) #23	Fdx2 (ENSMUSG00000079677) #24	Raver1 (ENSMUSG00000010205) #25	Tyk2 (ENSMUSG00000032175) #26	Cdc37 (ENSMUSG00000019471) #27	Pde4a (ENSMUSG00000032177) #28	Keap1 (ENSMUSG00000003308) #29	S1pr5 (ENSMUSG00000045087) #30	Atg4d (ENSMUSG00000002820) #31	Kri1 (ENSMUSG00000035047) #32	Cdkn2d (ENSMUSG00000096472) #33	Ap1m2 (ENSMUSG00000003309) #34	Slc44a2 (ENSMUSG00000057193) #35	Ilf3 (ENSMUSG00000032178) #36	Qtrt1 (ENSMUSG00000002825) #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00390000003354	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143.c #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Steppe mouse	MODERN SPECIES	3115	Fbxl12 (ENSMSIG00000017903)	Ubl5 (ENSMSIG00000017855)	Pin1 (ENSMSIG00000017849)	Olfm2 (ENSMSIG00000017812)	Col5a3 (ENSMSIG00000017680)	Rdh8 (ENSMSIG00000017665)	Shfl (ENSMSIG00000017630) #13	Angptl6 (ENSMSIG00000017615) #14	Ppan (ENSMSIG00000017577) #15	Eif3g (ENSMSIG00000017537) #16	Dnmt1 (ENSMSIG00000017200) #17	S1pr2 (ENSMSIG00000017197) #18	Mrpl4 (ENSMSIG00000017179) #19	Icam1 (ENSMSIG00000017165) #20	Icam4 (ENSMSIG00000017145) #21	Icam5 (ENSMSIG00000017102) #22	Zglp1 (ENSMSIG00000017087) #23	Fdx2 (ENSMSIG00000017053) #24	Raver1 (ENSMSIG00000017020) #25	Tyk2 (ENSMSIG00000016941) #26	Cdc37 (ENSMSIG00000016922) #27	Pde4a (ENSMSIG00000016751) #28	Keap1 (ENSMSIG00000016713) #29	S1pr5 (ENSMSIG00000016710) #30	Atg4d (ENSMSIG00000016653) #31	Kri1 (ENSMSIG00000016603) #32	Cdkn2d (ENSMSIG00000016582) #33	Ap1m2 (ENSMSIG00000016529) #34	Slc44a2 (ENSMSIG00000016395) #35	Ilf3 (ENSMSIG00000016302) #36	Qtrt1 (ENSMSIG00000016262) #37
spretus	MODERN SPECIES	18	Fbxl12 (MGP_SPRETEiJ_G0032966)	Ubl5 (MGP_SPRETEiJ_G0032967)	Pin1 (MGP_SPRETEiJ_G0032968)	Olfm2 (MGP_SPRETEiJ_G0032969)	Col5a3 (MGP_SPRETEiJ_G0032970)	Rdh8 (MGP_SPRETEiJ_G0032971)	Shfl (MGP_SPRETEiJ_G0032972) #13	Angptl6 (MGP_SPRETEiJ_G0032973) #14	Ppan (MGP_SPRETEiJ_G0032974) #15	Eif3g (MGP_SPRETEiJ_G0032975) #16	Dnmt1 (MGP_SPRETEiJ_G0032976) #17	S1pr2 (MGP_SPRETEiJ_G0032977) #18	Mrpl4 (MGP_SPRETEiJ_G0032978) #19	Icam1 (MGP_SPRETEiJ_G0032979) #20	Icam4 (MGP_SPRETEiJ_G0032980) #21	Icam5 (MGP_SPRETEiJ_G0032981) #22	Zglp1 (MGP_SPRETEiJ_G0032982) #23	Fdx2 (MGP_SPRETEiJ_G0032983) #24	Raver1 (MGP_SPRETEiJ_G0032984) #25	Tyk2 (MGP_SPRETEiJ_G0032985) #26	Cdc37 (MGP_SPRETEiJ_G0032986) #27	Pde4a (MGP_SPRETEiJ_G0032987) #28	Keap1 (MGP_SPRETEiJ_G0032988) #29	S1pr5 (MGP_SPRETEiJ_G0032989) #30	Atg4d (MGP_SPRETEiJ_G0032990) #31	Kri1 (MGP_SPRETEiJ_G0032991) #32	Cdkn2d (MGP_SPRETEiJ_G0032992) #33	Ap1m2 (MGP_SPRETEiJ_G0032993) #34	Slc44a2 (MGP_SPRETEiJ_G0032994) #35	Ilf3 (MGP_SPRETEiJ_G0032995) #36	Qtrt1 (MGP_SPRETEiJ_G0032996) #37
Ryukyu mouse	MODERN SPECIES	18	Fbxl12 (MGP_CAROLIEiJ_G0031842)	MGP_CAROLIEiJ_G0031843	Pin1 (MGP_CAROLIEiJ_G0031844)	Olfm2 (MGP_CAROLIEiJ_G0031845)	Col5a3 (MGP_CAROLIEiJ_G0031846)	Rdh8 (MGP_CAROLIEiJ_G0031847)	Shfl (MGP_CAROLIEiJ_G0031848) #13	Angptl6 (MGP_CAROLIEiJ_G0031849) #14	Ppan (MGP_CAROLIEiJ_G0031850) #15	Eif3g (MGP_CAROLIEiJ_G0031851) #16	Dnmt1 (MGP_CAROLIEiJ_G0031852) #17	S1pr2 (MGP_CAROLIEiJ_G0031853) #18	Mrpl4 (MGP_CAROLIEiJ_G0031854) #19	Icam1 (MGP_CAROLIEiJ_G0031855) #20	Icam4 (MGP_CAROLIEiJ_G0031856) #21	Icam5 (MGP_CAROLIEiJ_G0031857) #22	Zglp1 (MGP_CAROLIEiJ_G0031858) #23	Fdx2 (MGP_CAROLIEiJ_G0031859) #24	Raver1 (MGP_CAROLIEiJ_G0031860) #25	Tyk2 (MGP_CAROLIEiJ_G0031861) #26	Cdc37 (MGP_CAROLIEiJ_G0031862) #27	Pde4a (MGP_CAROLIEiJ_G0031863) #28	Keap1 (MGP_CAROLIEiJ_G0031864) #29	S1pr5 (MGP_CAROLIEiJ_G0031865) #30	Atg4d (MGP_CAROLIEiJ_G0031866) #31	Kri1 (MGP_CAROLIEiJ_G0031867) #32	Cdkn2d (MGP_CAROLIEiJ_G0031868) #33	Ap1m2 (MGP_CAROLIEiJ_G0031869) #34	Slc44a2 (MGP_CAROLIEiJ_G0031870) #35	Ilf3 (MGP_CAROLIEiJ_G0031871) #36	Qtrt1 (MGP_CAROLIEiJ_G0031872) #37
Shrew mouse	MODERN SPECIES	1	Fbxl12 (MGP_PahariEiJ_G0014708)	MGP_PahariEiJ_G0014709	Pin1 (MGP_PahariEiJ_G0014710)	Olfm2 (MGP_PahariEiJ_G0014711)	Col5a3 (MGP_PahariEiJ_G0014712)	Rdh8 (MGP_PahariEiJ_G0014713)	Shfl (MGP_PahariEiJ_G0014714) #13	Angptl6 (MGP_PahariEiJ_G0014715) #14	Ppan (MGP_PahariEiJ_G0014716) #15	Eif3g (MGP_PahariEiJ_G0014717) #16	Dnmt1 (MGP_PahariEiJ_G0014718) #17	S1pr2 (MGP_PahariEiJ_G0014719) #18	Mrpl4 (MGP_PahariEiJ_G0014720) #19	Icam1 (MGP_PahariEiJ_G0014721) #20	Icam4 (MGP_PahariEiJ_G0014722) #21	Icam5 (MGP_PahariEiJ_G0014723) #22	Zglp1 (MGP_PahariEiJ_G0014724) #23	Fdx2 (MGP_PahariEiJ_G0014725) #24	Raver1 (MGP_PahariEiJ_G0014726) #25	Tyk2 (MGP_PahariEiJ_G0014727) #26	Cdc37 (MGP_PahariEiJ_G0014728) #27	Pde4a (MGP_PahariEiJ_G0014729) #28	Keap1 (MGP_PahariEiJ_G0014730) #29	S1pr5 (MGP_PahariEiJ_G0014731) #30	Atg4d (MGP_PahariEiJ_G0014732) #31	Kri1 (MGP_PahariEiJ_G0014733) #32	Cdkn2d (MGP_PahariEiJ_G0014734) #33	Ap1m2 (MGP_PahariEiJ_G0014735) #34	Slc44a2 (MGP_PahariEiJ_G0014736) #35	Ilf3 (MGP_PahariEiJ_G0014737) #36	Qtrt1 (MGP_PahariEiJ_G0014738) #37
Rat	MODERN SPECIES	18	Fbxl12 (ENSRNOG00000064355)	Ubl5 (ENSRNOG00000069661)	Pin1 (ENSRNOG00000020474)	Olfm2 (ENSRNOG00000020519)	Col5a3 (ENSRNOG00000020525)	Rdh8 (ENSRNOG00000025767)	Shfl (ENSRNOG00000020580) #13	Angptl6 (ENSRNOG00000020603) #14	Ppan (ENSRNOG00000020608) #15	Eif3g (ENSRNOG00000020619) #16	Dnmt1 (ENSRNOG00000039859) #17	S1pr2 (ENSRNOG00000020653) #18	Mrpl4 (ENSRNOG00000020659) #19	Icam1 (ENSRNOG00000020679) #20	Icam4 (ENSRNOG00000042078) #21	Icam5 (ENSRNOG00000020694) #22	Zglp1 (ENSRNOG00000042601) #23	Fdx2 (ENSRNOG00000023020) #24	Raver1 (ENSRNOG00000020710) #25	Tyk2 (ENSRNOG00000032948) #26	Cdc37 (ENSRNOG00000033426) #27	Pde4a (ENSRNOG00000020828) #28	Keap1 (ENSRNOG00000020878) #29	S1pr5 (ENSRNOG00000020901) #30	Atg4d (ENSRNOG00000047625) #31	Kri1 (ENSRNOG00000057447) #32	Cdkn2d (ENSRNOG00000064248) #33	Ap1m2 (ENSRNOG00000043093) #34	Slc44a2 (ENSRNOG00000031824) #35	Ilf3 (ENSRNOG00000022741) #36	Qtrt1 (ENSRNOG00000007158) #37
Lesser Egyptian jerboa	MODERN SPECIES	143	Pin1rt1 (ENSJJAG00000000978)	Olfm2 (ENSJJAG00000009175)	Col5a3 (ENSJJAG00000012410)	Rdh8 (ENSJJAG00000017092)	Shfl (ENSJJAG00000018496) #13	Angptl6 (ENSJJAG00000018763) #14	Ppan (ENSJJAG00000016362) #15	Eif3g (ENSJJAG00000017602) #16	Dnmt1 (ENSJJAG00000021067) #17	ENSJJAG00000009832	S1pr2 (ENSJJAG00000013342) #18	ENSJJAG00000013403	Mrpl4 (ENSJJAG00000010573) #19	Icam1 (ENSJJAG00000014180) #20	Icam4 (ENSJJAG00000016127) #21	Icam5 (ENSJJAG00000016403) #22	Zglp1 (ENSJJAG00000017375) #23	Fdx2 (ENSJJAG00000017700) #24	Raver1 (ENSJJAG00000018219) #25	Tyk2 (ENSJJAG00000020250) #26	Cdc37 (ENSJJAG00000021223) #27	Pde4a (ENSJJAG00000022269) #28	Keap1 (ENSJJAG00000000119) #29	S1pr5 (ENSJJAG00000013383) #30	Atg4d (ENSJJAG00000000341) #31	Kri1 (ENSJJAG00000002972) #32	Cdkn2d (ENSJJAG00000008566) #33	Ap1m2 (ENSJJAG00000009862) #34	Slc44a2 (ENSJJAG00000011453) #35	ENSJJAG00000013051 #36	Qtrt1 (ENSJJAG00000013307) #37
Kangaroo rat	MODERN SPECIES	711																ENSDORG00000006166 #22
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00900000143551
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000165585	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143.b #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00900000143551
Marmotini	ANCESTRAL SPECIES	41	ENSGT00390000001945.f	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000165585	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143.b #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36
Alpin marmot	MODERN SPECIES	24	ENSMMMG00000015621	FBXL12 (ENSMMMG00000015655)	UBL5 (ENSMMMG00000015668)	PIN1 (ENSMMMG00000015677)	OLFM2 (ENSMMMG00000015681)	SHFL (ENSMMMG00000015812) #13	ANGPTL6 (ENSMMMG00000015819) #14	PPAN (ENSMMMG00000015833) #15	P2RY11 (ENSMMMG00000015865)	ENSMMMG00000015867 #16	DNMT1 (ENSMMMG00000015887) #17	S1PR2 (ENSMMMG00000017008) #18	MRPL4 (ENSMMMG00000017010) #19	ICAM1 (ENSMMMG00000017017) #20	ICAM4 (ENSMMMG00000017853) #21	ICAM5 (ENSMMMG00000017859) #22	ENSMMMG00000017874 #23	FDX2 (ENSMMMG00000017878) #24	RAVER1 (ENSMMMG00000017883) #25	ICAM3 (ENSMMMG00000017891)	TYK2 (ENSMMMG00000017895) #26	CDC37 (ENSMMMG00000017941) #27	PDE4A (ENSMMMG00000017967) #28	KEAP1 (ENSMMMG00000018969) #29	ENSMMMG00000018981 #30	ATG4D (ENSMMMG00000018985) #31	KRI1 (ENSMMMG00000019036) #32	ENSMMMG00000019102	AP1M2 (ENSMMMG00000019106) #34	SLC44A2 (ENSMMMG00000019127) #35	ILF3 (ENSMMMG00000019155) #36
Marmotini_b	ANCESTRAL SPECIES	40	ENSGT00390000001945.f	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000165585	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143.b #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36
Arctic ground squirrel	MODERN SPECIES	217	UBL5 (ENSUPAG00010022426)	PIN1 (ENSUPAG00010022430)	OLFM2 (ENSUPAG00010022432)	ENSUPAG00010022438	ENSUPAG00010000044	SHFL (ENSUPAG00010000069) #13	ANGPTL6 (ENSUPAG00010000091) #14	PPAN (ENSUPAG00010000094) #15	P2RY11 (ENSUPAG00010000138)	EIF3G (ENSUPAG00010000146) #16	DNMT1 (ENSUPAG00010000182) #17	S1PR2 (ENSUPAG00010000933) #18	MRPL4 (ENSUPAG00010000934) #19	ICAM1 (ENSUPAG00010000950) #20	ICAM4 (ENSUPAG00010000954) #21	ICAM5 (ENSUPAG00010000960) #22	ZGLP1 (ENSUPAG00010000992) #23	FDX2 (ENSUPAG00010001004) #24	RAVER1 (ENSUPAG00010001012) #25	ICAM3 (ENSUPAG00010001065)	TYK2 (ENSUPAG00010001822) #26	CDC37 (ENSUPAG00010001857) #27	PDE4A (ENSUPAG00010001873) #28	KEAP1 (ENSUPAG00010001991) #29	ENSUPAG00010002004 #30	ATG4D (ENSUPAG00010002014) #31	KRI1 (ENSUPAG00010002031) #32	CDKN2D (ENSUPAG00010002067) #33	AP1M2 (ENSUPAG00010002081) #34	SLC44A2 (ENSUPAG00010002115) #35	ILF3 (ENSUPAG00010002202) #36
Squirrel	MODERN SPECIES	259	UBL5 (ENSSTOG00000005286)	PIN1 (ENSSTOG00000005299)	OLFM2 (ENSSTOG00000005307)	COL5A3 (ENSSTOG00000015075)	ENSSTOG00000015104	SHFL (ENSSTOG00000026700) #13	ANGPTL6 (ENSSTOG00000028080) #14	PPAN (ENSSTOG00000010828) #15	P2RY11 (ENSSTOG00000010839)	EIF3G (ENSSTOG00000027655) #16	DNMT1 (ENSSTOG00000010841) #17	S1PR2 (ENSSTOG00000022687) #18	MRPL4 (ENSSTOG00000030121) #19	ICAM1 (ENSSTOG00000031629) #20	ICAM4 (ENSSTOG00000019729) #21	ICAM5 (ENSSTOG00000008181) #22	ZGLP1 (ENSSTOG00000021194) #23	FDX2 (ENSSTOG00000008207) #24	RAVER1 (ENSSTOG00000003241) #25	TYK2 (ENSSTOG00000003264) #26	CDC37 (ENSSTOG00000015962) #27	PDE4A (ENSSTOG00000027947) #28	KEAP1 (ENSSTOG00000010114) #29	S1PR5 (ENSSTOG00000024850) #30	ATG4D (ENSSTOG00000023750) #31	KRI1 (ENSSTOG00000007660) #32	ENSSTOG00000023338 #33	AP1M2 (ENSSTOG00000007719) #34	SLC44A2 (ENSSTOG00000007737) #35	ILF3 (ENSSTOG00000007786) #36	QTRT1 (ENSSTOG00000020466) #37
Eurasian red squirrel	MODERN SPECIES	7	UBL5 (ENSSVLG00005017569)	PIN1 (ENSSVLG00005017665)	OLFM2 (ENSSVLG00005017772)	RDH8 (ENSSVLG00005018552)	ENSSVLG00005018754	SHFL (ENSSVLG00005019608) #13	ANGPTL6 (ENSSVLG00005019674) #14	PPAN (ENSSVLG00005019747) #15	P2RY11 (ENSSVLG00005019829)	EIF3G (ENSSVLG00005019867) #16	DNMT1 (ENSSVLG00005019922) #17	S1PR2 (ENSSVLG00005019959) #18	MRPL4 (ENSSVLG00005020006) #19	ICAM1 (ENSSVLG00005020131) #20	ICAM4 (ENSSVLG00005020213) #21	ICAM5 (ENSSVLG00005020255) #22	ZGLP1 (ENSSVLG00005020288) #23	FDX2 (ENSSVLG00005020343) #24	RAVER1 (ENSSVLG00005020415) #25	ICAM3 (ENSSVLG00005020483)	TYK2 (ENSSVLG00005020519) #26	CDC37 (ENSSVLG00005020567) #27	PDE4A (ENSSVLG00005020638) #28	KEAP1 (ENSSVLG00005020889) #29	S1PR5 (ENSSVLG00005020921) #30	ATG4D (ENSSVLG00005020947) #31	KRI1 (ENSSVLG00005020995) #32	CDKN2D (ENSSVLG00005021167) #33	ENSSVLG00005021219 #34	SLC44A2 (ENSSVLG00005021433) #35	ENSSVLG00005021542
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00900000143551	ENSGT00940000158178 #35
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00390000003354	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00390000003354	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Long-tailed chinchilla	MODERN SPECIES	202	FBXL12 (ENSCLAG00000007941)	UBL5 (ENSCLAG00000009157)	PIN1 (ENSCLAG00000010041)	OLFM2 (ENSCLAG00000010808)	ENSCLAG00000006705	RDH8 (ENSCLAG00000008572)	SHFL (ENSCLAG00000007234) #13	ANGPTL6 (ENSCLAG00000008492) #14	PPAN (ENSCLAG00000009362) #15	EIF3G (ENSCLAG00000007381) #16	DNMT1 (ENSCLAG00000009575) #17	S1PR2 (ENSCLAG00000017915) #18	MRPL4 (ENSCLAG00000004552) #19	ICAM1 (ENSCLAG00000005350) #20	ICAM4 (ENSCLAG00000006269) #21	ICAM5 (ENSCLAG00000004832) #22	ZGLP1 (ENSCLAG00000006578) #23	FDX2 (ENSCLAG00000007657) #24	RAVER1 (ENSCLAG00000009336) #25	TYK2 (ENSCLAG00000013417) #26	CDC37 (ENSCLAG00000004550) #27	PDE4A (ENSCLAG00000005445) #28	KEAP1 (ENSCLAG00000011003) #29	S1PR5 (ENSCLAG00000011673) #30	ATG4D (ENSCLAG00000004668) #31	KRI1 (ENSCLAG00000006582) #32	CDKN2D (ENSCLAG00000016365) #33	AP1M2 (ENSCLAG00000015388) #34	SLC44A2 (ENSCLAG00000017339) #35	ILF3 (ENSCLAG00000011537) #36	QTRT1 (ENSCLAG00000009859) #37
Degu	MODERN SPECIES	91	FBXL12 (ENSODEG00000016590)	UBL5 (ENSODEG00000016745)	ENSODEG00000017428	OLFM2 (ENSODEG00000016646)	COL5A3 (ENSODEG00000016907)	RDH8 (ENSODEG00000016686)	SHFL (ENSODEG00000016467) #13	ANGPTL6 (ENSODEG00000016263) #14	PPAN (ENSODEG00000016743) #15	ENSODEG00000016542 #16	DNMT1 (ENSODEG00000016929) #17	S1PR2 (ENSODEG00000020460) #18	MRPL4 (ENSODEG00000016194) #19	ICAM1 (ENSODEG00000016545) #20	ICAM4 (ENSODEG00000016513) #21	ICAM5 (ENSODEG00000016352) #22	ENSODEG00000016522 #23	FDX2 (ENSODEG00000016614) #24	RAVER1 (ENSODEG00000016260) #25	TYK2 (ENSODEG00000016347) #26	CDC37 (ENSODEG00000016453) #27	PDE4A (ENSODEG00000016246) #28	KEAP1 (ENSODEG00000016128) #29	S1PR5 (ENSODEG00000020555) #30	ATG4D (ENSODEG00000016344) #31	KRI1 (ENSODEG00000016083) #32	CDKN2D (ENSODEG00000016627) #33	AP1M2 (ENSODEG00000016673) #34	SLC44A2 (ENSODEG00000016516) #35	ILF3 (ENSODEG00000015951) #36	QTRT1 (ENSODEG00000015894) #37
Guinea pig	MODERN SPECIES	274							RDH8 (ENSCPOG00000020452)	ANGPTL6 (ENSCPOG00000001748) #14	SHFL (ENSCPOG00000019761) #13	PPAN (ENSCPOG00000025539) #15	EIF3G (ENSCPOG00000009365) #16	P2RY11 (ENSCPOG00000021178)	DNMT1 (ENSCPOG00000019557) #17	S1PR2 (ENSCPOG00000035775) #18	MRPL4 (ENSCPOG00000006506) #19	ICAM5 (ENSCPOG00000000999) #22	ZGLP1 (ENSCPOG00000020181) #23	FDX2 (ENSCPOG00000001005) #24	RAVER1 (ENSCPOG00000001008) #25	TYK2 (ENSCPOG00000004366) #26	CDC37 (ENSCPOG00000031053) #27	PDE4A (ENSCPOG00000024714) #28	KEAP1 (ENSCPOG00000038105) #29
Naked mole-rat female	MODERN SPECIES	21	OLFM2 (ENSHGLG00000005597)	COL5A3 (ENSHGLG00000008192)	RDH8 (ENSHGLG00000035579)	ENSHGLG00000044492	SHFL (ENSHGLG00000018950) #13	ANGPTL6 (ENSHGLG00000005437) #14	PPAN (ENSHGLG00000006964) #15	P2RY11 (ENSHGLG00000042365)	EIF3G (ENSHGLG00000009901) #16	DNMT1 (ENSHGLG00000018262) #17	ENSHGLG00000037635	MRPL4 (ENSHGLG00000007839) #19	S1PR2 (ENSHGLG00000041926) #18	ICAM1 (ENSHGLG00000010281) #20	ICAM4 (ENSHGLG00000042569) #21	ICAM5 (ENSHGLG00000015929) #22	ZGLP1 (ENSHGLG00000043835) #23	FDX2 (ENSHGLG00000018345) #24	RAVER1 (ENSHGLG00000015460) #25	ICAM3 (ENSHGLG00000040279)	TYK2 (ENSHGLG00000015161) #26	CDC37 (ENSHGLG00000050693) #27	PDE4A (ENSHGLG00000015878) #28	KEAP1 (ENSHGLG00000015222) #29	S1PR5 (ENSHGLG00000045386) #30	ATG4D (ENSHGLG00000007086) #31	KRI1 (ENSHGLG00000015240) #32	CDKN2D (ENSHGLG00000013311) #33	AP1M2 (ENSHGLG00000017835) #34	ENSHGLG00000044071	SLC44A2 (ENSHGLG00000011332) #35
Lagomorpha	ANCESTRAL SPECIES	141	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26
Pika	MODERN SPECIES	5511													MRPL4 (ENSOPRG00000005735) #19	ICAM1 (ENSOPRG00000005758) #20	ENSOPRG00000005786 #21	ICAM5 (ENSOPRG00000005806) #22	FDX2 (ENSOPRG00000005840) #24	ENSOPRG00000005855 #25	ICAM3 (ENSOPRG00000005875)	TYK2 (ENSOPRG00000005899) #26
Tree shrew	MODERN SPECIES	86																ICAM5 (ENSTBEG00000016938) #22	ENSTBEG00000017141	ENSTBEG00000017176 #25	ICAM3 (ENSTBEG00000017449)	TYK2 (ENSTBEG00000017582) #26	CDC37 (ENSTBEG00000017686) #27	PDE4A (ENSTBEG00000009756) #28	KEAP1 (ENSTBEG00000009989) #29
Primates	ANCESTRAL SPECIES	18	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00900000143551
Strepsirrhini	ANCESTRAL SPECIES	28	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36
Lemuriformes	ANCESTRAL SPECIES	35	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Lemuriformes_a	ANCESTRAL SPECIES	25	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Coquerels sifaka	MODERN SPECIES	226	FBXL12 (ENSPCOG00000013856)	UBL5 (ENSPCOG00000019050)	PIN1 (ENSPCOG00000017665)	OLFM2 (ENSPCOG00000014172)	COL5A3 (ENSPCOG00000025910)	RDH8 (ENSPCOG00000021964)	SHFL (ENSPCOG00000025048) #13	ANGPTL6 (ENSPCOG00000025263) #14	PPAN (ENSPCOG00000027096) #15	P2RY11 (ENSPCOG00000018623)	EIF3G (ENSPCOG00000022779) #16	DNMT1 (ENSPCOG00000018383) #17	MRPL4 (ENSPCOG00000016733) #19	ICAM1 (ENSPCOG00000020759) #20	ICAM4 (ENSPCOG00000024827) #21	ICAM5 (ENSPCOG00000028361) #22	ZGLP1 (ENSPCOG00000016482) #23	FDX2 (ENSPCOG00000019514) #24	RAVER1 (ENSPCOG00000026605) #25	ICAM3 (ENSPCOG00000015812)	TYK2 (ENSPCOG00000007085) #26	CDC37 (ENSPCOG00000015827) #27	PDE4A (ENSPCOG00000024879) #28	KEAP1 (ENSPCOG00000026076) #29	ATG4D (ENSPCOG00000018567) #31	KRI1 (ENSPCOG00000004012) #32	CDKN2D (ENSPCOG00000018426) #33	AP1M2 (ENSPCOG00000025286) #34	SLC44A2 (ENSPCOG00000017229) #35	ILF3 (ENSPCOG00000019611) #36	QTRT1 (ENSPCOG00000017773) #37
Greater bamboo lemur	MODERN SPECIES	1592													ENSPSMG00000018263	ENSPSMG00000018266 #20	ICAM4 (ENSPSMG00000018274) #21	ICAM5 (ENSPSMG00000018287) #22	ENSPSMG00000018299 #23	FDX2 (ENSPSMG00000018302) #24	RAVER1 (ENSPSMG00000018368) #25	ICAM3 (ENSPSMG00000018423)	TYK2 (ENSPSMG00000018540) #26	CDC37 (ENSPSMG00000018638) #27	PDE4A (ENSPSMG00000018693) #28	KEAP1 (ENSPSMG00000018702) #29	ATG4D (ENSPSMG00000018715) #31	KRI1 (ENSPSMG00000018724) #32	CDKN2D (ENSPSMG00000018726) #33	AP1M2 (ENSPSMG00000018790) #34
Mouse lemur	MODERN SPECIES	16	UBL5 (ENSMICG00000001992)	PIN1 (ENSMICG00000043503)	OLFM2 (ENSMICG00000002003)	COL5A3 (ENSMICG00000006871)	RDH8 (ENSMICG00000006911)	SHFL (ENSMICG00000029284) #13	ANGPTL6 (ENSMICG00000031653) #14	PPAN (ENSMICG00000047321) #15	P2RY11 (ENSMICG00000006915)	EIF3G (ENSMICG00000006936) #16	DNMT1 (ENSMICG00000010231) #17	S1PR2 (ENSMICG00000029506) #18	MRPL4 (ENSMICG00000010267) #19	ICAM1 (ENSMICG00000047282) #20	ICAM4 (ENSMICG00000010290) #21	ICAM5 (ENSMICG00000010301) #22	ZGLP1 (ENSMICG00000036834) #23	FDX2 (ENSMICG00000029070) #24	RAVER1 (ENSMICG00000010326) #25	ICAM3 (ENSMICG00000010335)	TYK2 (ENSMICG00000010345) #26	CDC37 (ENSMICG00000010376) #27	PDE4A (ENSMICG00000026345) #28	KEAP1 (ENSMICG00000009563) #29	ATG4D (ENSMICG00000009575) #31	KRI1 (ENSMICG00000009591) #32	CDKN2D (ENSMICG00000032531) #33	AP1M2 (ENSMICG00000009639) #34	SLC44A2 (ENSMICG00000009648) #35	ILF3 (ENSMICG00000009694) #36	QTRT1 (ENSMICG00000029300) #37
Bushbaby	MODERN SPECIES	242	ZNF121 (ENSOGAG00000025131)	FBXL12 (ENSOGAG00000014529)	PIN1 (ENSOGAG00000017002)	OLFM2 (ENSOGAG00000010428)	COL5A3 (ENSOGAG00000016214)	RDH8 (ENSOGAG00000014640)	SHFL (ENSOGAG00000025421) #13	ANGPTL6 (ENSOGAG00000024465) #14	PPAN (ENSOGAG00000014454) #15	ENSOGAG00000014463 #16	DNMT1 (ENSOGAG00000001265) #17	S1PR2 (ENSOGAG00000011114) #18	MRPL4 (ENSOGAG00000011051) #19	ICAM1 (ENSOGAG00000011055) #20	ICAM4 (ENSOGAG00000011058) #21	ICAM5 (ENSOGAG00000011064) #22	ZGLP1 (ENSOGAG00000025914) #23	FDX2 (ENSOGAG00000011070) #24	RAVER1 (ENSOGAG00000011071) #25	ICAM3 (ENSOGAG00000011078)	TYK2 (ENSOGAG00000011083) #26	CDC37 (ENSOGAG00000011088) #27	PDE4A (ENSOGAG00000012581) #28	KEAP1 (ENSOGAG00000012589) #29	ENSOGAG00000027497 #30	ATG4D (ENSOGAG00000012591) #31	KRI1 (ENSOGAG00000027909) #32	CDKN2D (ENSOGAG00000030833) #33	AP1M2 (ENSOGAG00000014423) #34	SLC44A2 (ENSOGAG00000029872) #35	ENSOGAG00000015244 #36
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00900000143551
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147865	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35
Hominoidea	ANCESTRAL SPECIES		ENSGT00390000001945	ENSGT00640000091578.n	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.a.a #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35
Hominidae	ANCESTRAL SPECIES		ENSGT00390000001945	ENSGT00640000091578.n	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.a.a #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00390000001945	ENSGT00640000091578.n	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.a.a #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00390000001945	ENSGT00640000091578.n	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.a.a #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35
Pan	ANCESTRAL SPECIES	14	ENSGT00390000001945	ENSGT00640000091578.n	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.a.a #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35
Bonobo	MODERN SPECIES	10	UBL5 (ENSPPAG00000025275)	ENSPPAG00000032269	OLFM2 (ENSPPAG00000041568)	COL5A3 (ENSPPAG00000043767)	RDH8 (ENSPPAG00000033700)	SHFL (ENSPPAG00000037643) #13	ENSPPAG00000043275 #14	PPAN (ENSPPAG00000039744) #15	P2RY11 (ENSPPAG00000041793)	EIF3G (ENSPPAG00000027888) #16	DNMT1 (ENSPPAG00000027461) #17	S1PR2 (ENSPPAG00000019512) #18	ENSPPAG00000041740 #19	ICAM1 (ENSPPAG00000034232) #20	ICAM4 (ENSPPAG00000035190) #21	ICAM5 (ENSPPAG00000030844) #22	ZGLP1 (ENSPPAG00000028628) #23	FDX2 (ENSPPAG00000012689) #24	RAVER1 (ENSPPAG00000002611) #25	ICAM3 (ENSPPAG00000042660)	ENSPPAG00000020234	TYK2 (ENSPPAG00000039135) #26	CDC37 (ENSPPAG00000041597) #27	PDE4A (ENSPPAG00000043851) #28	KEAP1 (ENSPPAG00000038958) #29	S1PR5 (ENSPPAG00000036033) #30	ATG4D (ENSPPAG00000031810) #31	KRI1 (ENSPPAG00000040241) #32	ENSPPAG00000038326 #33	AP1M2 (ENSPPAG00000042634) #34	SLC44A2 (ENSPPAG00000039593) #35
Chimpanzee	MODERN SPECIES	10	UBL5 (ENSPTRG00000010451)	PIN1 (ENSPTRG00000010452)	OLFM2 (ENSPTRG00000010453)	COL5A3 (ENSPTRG00000010454)	RDH8 (ENSPTRG00000010455)	SHFL (ENSPTRG00000010457) #13	ANGPTL6 (ENSPTRG00000010458) #14	PPAN (ENSPTRG00000010459) #15	P2RY11 (ENSPTRG00000040877)	EIF3G (ENSPTRG00000010460) #16	DNMT1 (ENSPTRG00000010461) #17	S1PR2 (ENSPTRG00000041995) #18	MRPL4 (ENSPTRG00000010462) #19	ICAM1 (ENSPTRG00000010463) #20	ICAM4 (ENSPTRG00000022810) #21	ICAM5 (ENSPTRG00000010464) #22	ZGLP1 (ENSPTRG00000034377) #23	FDX2 (ENSPTRG00000010465) #24	RAVER1 (ENSPTRG00000010466) #25	ICAM3 (ENSPTRG00000010467)	ENSPTRG00000043915	TYK2 (ENSPTRG00000010468) #26	CDC37 (ENSPTRG00000010469) #27	PDE4A (ENSPTRG00000010470) #28	KEAP1 (ENSPTRG00000010473) #29	ATG4D (ENSPTRG00000010475) #31	KRI1 (ENSPTRG00000010476) #32	CDKN2D (ENSPTRG00000010477) #33	AP1M2 (ENSPTRG00000010478) #34	SLC44A2 (ENSPTRG00000010479) #35	ENSPTRG00000047038
Human	MODERN SPECIES	10	PIN1 (ENSG00000127445)	OLFM2 (ENSG00000105088)	COL5A3 (ENSG00000080573)	RDH8 (ENSG00000080511)	SHFL (ENSG00000130813) #13	ANGPTL6 (ENSG00000130812) #14	PPAN-P2RY11 (ENSG00000243207)	PPAN (ENSG00000130810) #15	P2RY11 (ENSG00000244165)	EIF3G (ENSG00000130811) #16	DNMT1 (ENSG00000130816) #17	S1PR2 (ENSG00000267534) #18	MRPL4 (ENSG00000105364) #19	ICAM1 (ENSG00000090339) #20	ICAM4 (ENSG00000105371) #21	ICAM5 (ENSG00000105376) #22	ZGLP1 (ENSG00000220201) #23	FDX2 (ENSG00000267673) #24	RAVER1 (ENSG00000161847) #25	ICAM3 (ENSG00000076662)	TYK2 (ENSG00000105397) #26	CDC37 (ENSG00000105401) #27	PDE4A (ENSG00000065989) #28	KEAP1 (ENSG00000079999) #29	S1PR5 (ENSG00000180739) #30	ATG4D (ENSG00000130734) #31	KRI1 (ENSG00000129347) #32	CDKN2D (ENSG00000129355) #33	AP1M2 (ENSG00000129354) #34	SLC44A2 (ENSG00000129353) #35	ILF3 (ENSG00000129351) #36
Gorilla	MODERN SPECIES	10	UBL5 (ENSGGOG00000005999)	ENSGGOG00000006008	OLFM2 (ENSGGOG00000006013)	COL5A3 (ENSGGOG00000015350)	RDH8 (ENSGGOG00000012240)	SHFL (ENSGGOG00000016174) #13	ANGPTL6 (ENSGGOG00000016180) #14	PPAN (ENSGGOG00000039459) #15	P2RY11 (ENSGGOG00000005418)	EIF3G (ENSGGOG00000005434) #16	DNMT1 (ENSGGOG00000016574) #17	S1PR2 (ENSGGOG00000004193) #18	ENSGGOG00000036529 #19	ICAM1 (ENSGGOG00000005980) #20	ICAM4 (ENSGGOG00000005987) #21	ICAM5 (ENSGGOG00000005992) #22	ZGLP1 (ENSGGOG00000006002) #23	RAVER1 (ENSGGOG00000006015) #25	ENSGGOG00000006021	ENSGGOG00000041269	TYK2 (ENSGGOG00000006028) #26	CDC37 (ENSGGOG00000008098) #27	PDE4A (ENSGGOG00000026422) #28	KEAP1 (ENSGGOG00000001935) #29	ATG4D (ENSGGOG00000001366) #31	KRI1 (ENSGGOG00000014637) #32	CDKN2D (ENSGGOG00000004618) #33	AP1M2 (ENSGGOG00000004621) #34	SLC44A2 (ENSGGOG00000002619) #35	ENSGGOG00000043291	ENSGGOG00000026485
Orangutan	MODERN SPECIES	10	UBL5 (ENSPPYG00000009536)	PIN1 (ENSPPYG00000009537)	OLFM2 (ENSPPYG00000009538)	COL5A3 (ENSPPYG00000009539)	ENSPPYG00000009540	SHFL (ENSPPYG00000009541) #13	ENSPPYG00000009542 #14	PPAN (ENSPPYG00000030196) #15	P2RY11 (ENSPPYG00000033614)	EIF3G (ENSPPYG00000009544) #16	DNMT1 (ENSPPYG00000009545) #17	ENSPPYG00000009546 #18	ENSPPYG00000009547 #19	ICAM1 (ENSPPYG00000009548) #20	ENSPPYG00000009549 #21	ICAM5 (ENSPPYG00000031661) #22	ZGLP1 (ENSPPYG00000029769) #23	FDX2 (ENSPPYG00000009550) #24	ENSPPYG00000010514 #25	ENSPPYG00000036913	TYK2 (ENSPPYG00000010516) #26	CDC37 (ENSPPYG00000009551) #27	PDE4A (ENSPPYG00000009552) #28	KEAP1 (ENSPPYG00000009553) #29	S1PR5 (ENSPPYG00000009554) #30	ATG4D (ENSPPYG00000036362) #31	KRI1 (ENSPPYG00000009556) #32	CDKN2D (ENSPPYG00000009557) #33	AP1M2 (ENSPPYG00000009558) #34	SLC44A2 (ENSPPYG00000009559) #35	ENSPPYG00000034793
Gibbon	MODERN SPECIES	387																ENSNLEG00000007747 #22
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT00940000172524	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00900000143551
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802.q.a #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35
Vervet Monkey	MODERN SPECIES	25	PIN1 (ENSCSAG00000007637)	OLFM2 (ENSCSAG00000007635)	COL5A3 (ENSCSAG00000007588)	ENSCSAG00000007448	ENSCSAG00000007442	SHFL (ENSCSAG00000007434) #13	ANGPTL6 (ENSCSAG00000007427) #14	PPAN (ENSCSAG00000007423) #15	P2RY11 (ENSCSAG00000007416)	ENSCSAG00000007406 #16	DNMT1 (ENSCSAG00000007378) #17	S1PR2 (ENSCSAG00000018835) #18	MRPL4 (ENSCSAG00000007362) #19	ICAM1 (ENSCSAG00000007356) #20	ICAM4 (ENSCSAG00000007349) #21	ICAM5 (ENSCSAG00000007342) #22	ZGLP1 (ENSCSAG00000007336) #23	FDX2 (ENSCSAG00000007325) #24	RAVER1 (ENSCSAG00000007317) #25	TYK2 (ENSCSAG00000007285) #26	ENSCSAG00000007234 #27	PDE4A (ENSCSAG00000007204) #28	KEAP1 (ENSCSAG00000007107) #29	S1PR5 (ENSCSAG00000018836) #30	ATG4D (ENSCSAG00000007103) #31	KRI1 (ENSCSAG00000007096) #32	AP1M2 (ENSCSAG00000007087) #34	CDKN2D (ENSCSAG00000007080) #33	SLC44A2 (ENSCSAG00000007045) #35	ILF3 (ENSCSAG00000006983) #36	QTRT1 (ENSCSAG00000006976) #37
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802.r #16	ENSGT00510000047802.q.a #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147865	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802.r #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147865	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34
Olive baboon	MODERN SPECIES	12	FBXL12 (ENSPANG00000003096)	ENSPANG00000030257	UBL5 (ENSPANG00000036048)	PIN1 (ENSPANG00000008464)	OLFM2 (ENSPANG00000004123)	COL5A3 (ENSPANG00000010734)	ENSPANG00000047295	SHFL (ENSPANG00000029871) #13	ANGPTL6 (ENSPANG00000008463) #14	PPAN (ENSPANG00000005948) #15	DNMT1 (ENSPANG00000001264) #17	S1PR2 (ENSPANG00000010514) #18	MRPL4 (ENSPANG00000001265) #19	ICAM1 (ENSPANG00000009752) #20	ICAM4 (ENSPANG00000011444) #21	ICAM5 (ENSPANG00000017123) #22	ZGLP1 (ENSPANG00000005034) #23	FDX2 (ENSPANG00000035899) #24	ICAM3 (ENSPANG00000011402)	TYK2 (ENSPANG00000019963) #26	ENSPANG00000011043 #27	PDE4A (ENSPANG00000007730) #28	KEAP1 (ENSPANG00000003566) #29	S1PR5 (ENSPANG00000047566) #30	ATG4D (ENSPANG00000006123) #31	KRI1 (ENSPANG00000022951) #32	CDKN2D (ENSPANG00000022407) #33	SLC44A2 (ENSPANG00000004916) #35	ILF3 (ENSPANG00000014995) #36	QTRT1 (ENSPANG00000014330) #37	DNM2 (ENSPANG00000003166)
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802.r #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147865	ENSGT00910000147270	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35
Sooty mangabey	MODERN SPECIES	347	UBL5 (ENSCATG00000033567)	PIN1 (ENSCATG00000043966)	OLFM2 (ENSCATG00000030581)	COL5A3 (ENSCATG00000036440)	RDH8 (ENSCATG00000032223)	SHFL (ENSCATG00000035028) #13	ANGPTL6 (ENSCATG00000037030) #14	PPAN (ENSCATG00000040554) #15	EIF3G (ENSCATG00000031281) #16	P2RY11 (ENSCATG00000041853)	DNMT1 (ENSCATG00000031001) #17	S1PR2 (ENSCATG00000018961) #18	ENSCATG00000033090	ICAM1 (ENSCATG00000036475) #20	ICAM4 (ENSCATG00000040339) #21	ICAM5 (ENSCATG00000043572) #22	ZGLP1 (ENSCATG00000031603) #23	FDX2 (ENSCATG00000044778) #24	RAVER1 (ENSCATG00000043863) #25	ICAM3 (ENSCATG00000041750)	ENSCATG00000021386	ENSCATG00000041337	TYK2 (ENSCATG00000003840) #26	ENSCATG00000032331 #27	PDE4A (ENSCATG00000044053) #28	KEAP1 (ENSCATG00000030706) #29	ATG4D (ENSCATG00000043691) #31	KRI1 (ENSCATG00000035384) #32	CDKN2D (ENSCATG00000029941) #33	AP1M2 (ENSCATG00000023909) #34	SLC44A2 (ENSCATG00000043520) #35
Drill	MODERN SPECIES	183	UBL5 (ENSMLEG00000028569)	PIN1 (ENSMLEG00000038056)	OLFM2 (ENSMLEG00000035502)	COL5A3 (ENSMLEG00000026681)	RDH8 (ENSMLEG00000000403)	SHFL (ENSMLEG00000041654) #13	ANGPTL6 (ENSMLEG00000039466) #14	PPAN (ENSMLEG00000042991) #15	P2RY11 (ENSMLEG00000033084)	EIF3G (ENSMLEG00000035345) #16	DNMT1 (ENSMLEG00000038693) #17	S1PR2 (ENSMLEG00000011240) #18	MRPL4 (ENSMLEG00000041712) #19	ICAM1 (ENSMLEG00000034670) #20	ICAM4 (ENSMLEG00000032689) #21	ICAM5 (ENSMLEG00000040636) #22	ZGLP1 (ENSMLEG00000040681) #23	FDX2 (ENSMLEG00000042733) #24	RAVER1 (ENSMLEG00000041959) #25	ICAM3 (ENSMLEG00000030442)	ENSMLEG00000017274	TYK2 (ENSMLEG00000028554) #26	ENSMLEG00000018092 #27	PDE4A (ENSMLEG00000030983) #28	KEAP1 (ENSMLEG00000036747) #29	ATG4D (ENSMLEG00000038608) #31	KRI1 (ENSMLEG00000036224) #32	ENSMLEG00000037445	AP1M2 (ENSMLEG00000022842) #34	SLC44A2 (ENSMLEG00000044435) #35	ENSMLEG00000028980
Macaca	ANCESTRAL SPECIES	21	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802.q.a #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00910000147865	ENSGT00910000147270	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802.q.a #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00910000147865	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36
Rhesus	MODERN SPECIES	10	OLFM2 (ENSMMUG00000016596)	COL5A3 (ENSMMUG00000039980)	RDH8 (ENSMMUG00000011205)	ENSMMUG00000037639	ENSMMUG00000051353	SHFL (ENSMMUG00000018138) #13	ANGPTL6 (ENSMMUG00000042707) #14	PPAN (ENSMMUG00000017211) #15	EIF3G (ENSMMUG00000017217) #16	DNMT1 (ENSMMUG00000014604) #17	ENSMMUG00000058342	S1PR2 (ENSMMUG00000006586) #18	MRPL4 (ENSMMUG00000001219) #19	ICAM1 (ENSMMUG00000014896) #20	ICAM4 (ENSMMUG00000009343) #21	ICAM5 (ENSMMUG00000040746) #22	ZGLP1 (ENSMMUG00000050415) #23	FDX2 (ENSMMUG00000059073) #24	RAVER1 (ENSMMUG00000014897) #25	TYK2 (ENSMMUG00000003110) #26	CDC37 (ENSMMUG00000003111) #27	PDE4A (ENSMMUG00000016122) #28	ENSMMUG00000059305	KEAP1 (ENSMMUG00000005218) #29	S1PR5 (ENSMMUG00000008686) #30	ATG4D (ENSMMUG00000046883) #31	KRI1 (ENSMMUG00000011951) #32	CDKN2D (ENSMMUG00000011953) #33	AP1M2 (ENSMMUG00000016593) #34	SLC44A2 (ENSMMUG00000003744) #35	ENSMMUG00000060522
Crab-eating macaque	MODERN SPECIES	10	OLFM2 (ENSMFAG00000002640)	COL5A3 (ENSMFAG00000043985)	RDH8 (ENSMFAG00000042121)	ENSMFAG00000051361	SHFL (ENSMFAG00000041268) #13	ANGPTL6 (ENSMFAG00000038494) #14	PPAN (ENSMFAG00000042854) #15	EIF3G (ENSMFAG00000003465) #16	DNMT1 (ENSMFAG00000023786) #17	S1PR2 (ENSMFAG00000030545) #18	MRPL4 (ENSMFAG00000003526) #19	ENSMFAG00000063966	ENSMFAG00000059527	ICAM1 (ENSMFAG00000026825) #20	ICAM4 (ENSMFAG00000003379) #21	ICAM5 (ENSMFAG00000002910) #22	ZGLP1 (ENSMFAG00000059142) #23	FDX2 (ENSMFAG00000043889) #24	RAVER1 (ENSMFAG00000037977) #25	ENSMFAG00000062072	TYK2 (ENSMFAG00000044770) #26	ENSMFAG00000037601 #27	PDE4A (ENSMFAG00000004722) #28	KEAP1 (ENSMFAG00000054809) #29	ENSMFAG00000044391	ATG4D (ENSMFAG00000036604) #31	KRI1 (ENSMFAG00000046360) #32	CDKN2D (ENSMFAG00000032475) #33	AP1M2 (ENSMFAG00000002157) #34	SLC44A2 (ENSMFAG00000035994) #35	ILF3 (ENSMFAG00000039557) #36
Pig-tailed macaque	MODERN SPECIES	76	PIN1 (ENSMNEG00000034886)	OLFM2 (ENSMNEG00000035191)	COL5A3 (ENSMNEG00000031289)	RDH8 (ENSMNEG00000017486)	ENSMNEG00000037564	SHFL (ENSMNEG00000038774) #13	ANGPTL6 (ENSMNEG00000034417) #14	PPAN (ENSMNEG00000031363) #15	P2RY11 (ENSMNEG00000019815)	EIF3G (ENSMNEG00000029643) #16	DNMT1 (ENSMNEG00000029351) #17	S1PR2 (ENSMNEG00000027107) #18	MRPL4 (ENSMNEG00000040746) #19	ICAM1 (ENSMNEG00000033129) #20	ICAM4 (ENSMNEG00000043426) #21	ICAM5 (ENSMNEG00000044080) #22	ZGLP1 (ENSMNEG00000029422) #23	FDX2 (ENSMNEG00000031990) #24	RAVER1 (ENSMNEG00000028390) #25	ENSMNEG00000028055	ENSMNEG00000036746	ICAM3 (ENSMNEG00000044562)	TYK2 (ENSMNEG00000038855) #26	ENSMNEG00000036974 #27	PDE4A (ENSMNEG00000040163) #28	KEAP1 (ENSMNEG00000041263) #29	ATG4D (ENSMNEG00000043930) #31	KRI1 (ENSMNEG00000043431) #32	CDKN2D (ENSMNEG00000033406) #33	AP1M2 (ENSMNEG00000042247) #34	ENSMNEG00000044028
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000165585	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100.l #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00910000147865	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00900000143551	ENSGT00940000158178 #35
Golden snub-nosed monkey	MODERN SPECIES	1762	ENSRROG00000038908	ENSRROG00000040022	OLFM2 (ENSRROG00000030712)	COL5A3 (ENSRROG00000042842)	RDH8 (ENSRROG00000035886)	SHFL (ENSRROG00000036318) #13	ANGPTL6 (ENSRROG00000043932) #14	ENSRROG00000034660 #15	P2RY11 (ENSRROG00000035428)	EIF3G (ENSRROG00000033193) #16	ENSRROG00000038702 #17	S1PR2 (ENSRROG00000008412) #18	MRPL4 (ENSRROG00000003982) #19	ICAM1 (ENSRROG00000032596) #20	ICAM4 (ENSRROG00000029024) #21	ICAM5 (ENSRROG00000040866) #22	ZGLP1 (ENSRROG00000030601) #23	FDX2 (ENSRROG00000043177) #24	RAVER1 (ENSRROG00000031186) #25	ENSRROG00000023550	ICAM3 (ENSRROG00000042281)	TYK2 (ENSRROG00000030801) #26	ENSRROG00000030450 #27	PDE4A (ENSRROG00000029729) #28	KEAP1 (ENSRROG00000041020) #29	ATG4D (ENSRROG00000041650) #31	KRI1 (ENSRROG00000041397) #32	CDKN2D (ENSRROG00000034268) #33	AP1M2 (ENSRROG00000036852) #34	ENSRROG00000004844	ENSRROG00000032176
Black snub-nosed monkey	MODERN SPECIES	631	ENSRBIG00000026975	ENSRBIG00000031874	COL5A3 (ENSRBIG00000044533)	ENSRBIG00000037985	SHFL (ENSRBIG00000033517) #13	ANGPTL6 (ENSRBIG00000030201) #14	PPAN (ENSRBIG00000041320) #15	P2RY11 (ENSRBIG00000029626)	EIF3G (ENSRBIG00000041693) #16	DNMT1 (ENSRBIG00000038063) #17	ENSRBIG00000031673	S1PR2 (ENSRBIG00000021988) #18	ENSRBIG00000032283 #19	ICAM1 (ENSRBIG00000039899) #20	ICAM4 (ENSRBIG00000042370) #21	ICAM5 (ENSRBIG00000042660) #22
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00910000147865	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089.i #34	ENSGT00940000158178 #35
Cebidae	ANCESTRAL SPECIES	20	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100.n #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089.i.a.a #34	ENSGT00940000158178 #35	ENSGT01100000264612
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT01030000234518.C.a.a	ENSGT00510000047802 #16	ENSGT00390000005100.n #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159005	ENSGT00940000159869 #26	ENSGT00390000013443.c.e.b #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089.i.a.a #34	ENSGT00940000158178 #35	ENSGT01100000264612	ENSGT00940000156719 #36
Capuchin	MODERN SPECIES	263	UBL5 (ENSCCAG00000021270)	PIN1 (ENSCCAG00000035602)	OLFM2 (ENSCCAG00000029162)	COL5A3 (ENSCCAG00000035804)	RDH8 (ENSCCAG00000030137)	SHFL (ENSCCAG00000030128) #13	ANGPTL6 (ENSCCAG00000020269) #14	PPAN (ENSCCAG00000032527) #15	P2RY11 (ENSCCAG00000030662)	EIF3G (ENSCCAG00000013164) #16	ENSCCAG00000034652 #17	S1PR2 (ENSCCAG00000019768) #18	MRPL4 (ENSCCAG00000036054) #19	ICAM1 (ENSCCAG00000028706) #20	ICAM4 (ENSCCAG00000035684) #21	ICAM5 (ENSCCAG00000034532) #22	ZGLP1 (ENSCCAG00000031246) #23	FDX2 (ENSCCAG00000029890) #24	RAVER1 (ENSCCAG00000031723) #25	ICAM3 (ENSCCAG00000023024)	TYK2 (ENSCCAG00000023503) #26	CDC37 (ENSCCAG00000024424) #27	PDE4A (ENSCCAG00000027835) #28	KEAP1 (ENSCCAG00000028133) #29	ATG4D (ENSCCAG00000028581) #31	KRI1 (ENSCCAG00000034336) #32	CDKN2D (ENSCCAG00000031903) #33	ENSCCAG00000021920 #34	SLC44A2 (ENSCCAG00000036854) #35	ENSCCAG00000033418	ILF3 (ENSCCAG00000019834) #36
Bolivian squirrel monkey	MODERN SPECIES	150	UBL5 (ENSSBOG00000030597)	PIN1 (ENSSBOG00000021702)	OLFM2 (ENSSBOG00000020219)	COL5A3 (ENSSBOG00000023264)	RDH8 (ENSSBOG00000036009)	SHFL (ENSSBOG00000020470) #13	ANGPTL6 (ENSSBOG00000013464) #14	PPAN (ENSSBOG00000026246) #15	P2RY11 (ENSSBOG00000034093)	EIF3G (ENSSBOG00000006718) #16	DNMT1 (ENSSBOG00000035240) #17	S1PR2 (ENSSBOG00000017418) #18	MRPL4 (ENSSBOG00000020666) #19	ICAM1 (ENSSBOG00000023183) #20	ICAM4 (ENSSBOG00000016504) #21	ICAM5 (ENSSBOG00000021550) #22	ZGLP1 (ENSSBOG00000031281) #23	FDX2 (ENSSBOG00000033673) #24	RAVER1 (ENSSBOG00000023423) #25	ICAM3 (ENSSBOG00000028180)	TYK2 (ENSSBOG00000024605) #26	CDC37 (ENSSBOG00000023850) #27	PDE4A (ENSSBOG00000034527) #28	KEAP1 (ENSSBOG00000026559) #29	ATG4D (ENSSBOG00000030727) #31	KRI1 (ENSSBOG00000035570) #32	CDKN2D (ENSSBOG00000024633) #33
Marmoset	MODERN SPECIES	14	UBL5 (ENSCJAG00000006097)	PIN1 (ENSCJAG00000048251)	OLFM2 (ENSCJAG00000006061)	COL5A3 (ENSCJAG00000006008)	RDH8 (ENSCJAG00000005990)	SHFL (ENSCJAG00000005935) #13	ANGPTL6 (ENSCJAG00000005919) #14	PPAN (ENSCJAG00000039296) #15	P2RY11 (ENSCJAG00000039396)	EIF3G (ENSCJAG00000005889) #16	DNMT1 (ENSCJAG00000005794) #17	S1PR2 (ENSCJAG00000022912) #18	MRPL4 (ENSCJAG00000005764) #19	ICAM1 (ENSCJAG00000047562) #20	ICAM4 (ENSCJAG00000005760) #21	ICAM5 (ENSCJAG00000005726) #22	ZGLP1 (ENSCJAG00000075845) #23	FDX2 (ENSCJAG00000080365) #24	RAVER1 (ENSCJAG00000005671) #25	ICAM3 (ENSCJAG00000005644)	TYK2 (ENSCJAG00000006781) #26	ENSCJAG00000006753 #27	PDE4A (ENSCJAG00000006698) #28	KEAP1 (ENSCJAG00000006677) #29	S1PR5 (ENSCJAG00000041143) #30	ATG4D (ENSCJAG00000006637) #31	KRI1 (ENSCJAG00000006629) #32	CDKN2D (ENSCJAG00000083382) #33	ENSCJAG00000006616 #34	SLC44A2 (ENSCJAG00000035886) #35	ILF3 (ENSCJAG00000006374) #36
Mas night monkey	MODERN SPECIES	937	FBXL12 (ENSANAG00000012926)	PIN1 (ENSANAG00000020991)	OLFM2 (ENSANAG00000020226)	COL5A3 (ENSANAG00000021209)	RDH8 (ENSANAG00000007684)	SHFL (ENSANAG00000020855) #13	ANGPTL6 (ENSANAG00000024268) #14	ENSANAG00000020371 #15	P2RY11 (ENSANAG00000020323)	EIF3G (ENSANAG00000024081) #16	DNMT1 (ENSANAG00000024827) #17	S1PR2 (ENSANAG00000017596) #18	MRPL4 (ENSANAG00000025428) #19	ICAM1 (ENSANAG00000022000) #20	ICAM4 (ENSANAG00000020931) #21	ICAM5 (ENSANAG00000024954) #22	ZGLP1 (ENSANAG00000026424) #23	FDX2 (ENSANAG00000023664) #24	RAVER1 (ENSANAG00000028226) #25	ICAM3 (ENSANAG00000023726)	ENSANAG00000026066	TYK2 (ENSANAG00000036847) #26	ENSANAG00000024691 #27	PDE4A (ENSANAG00000024994) #28	KEAP1 (ENSANAG00000023114) #29	ATG4D (ENSANAG00000026983) #31	KRI1 (ENSANAG00000026577) #32	CDKN2D (ENSANAG00000030388) #33	ENSANAG00000024668 #34	SLC44A2 (ENSANAG00000025859) #35	ENSANAG00000033056