Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000003354 #7	ENSGT00390000001945 #8	ENSGT00640000091578 #9	ENSGT00940000159148 #10	ENSGT00940000162394 #11	ENSGT00940000155412.b #12	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143 #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000003354 #7	ENSGT00390000001945 #8	ENSGT00640000091578 #9	ENSGT00940000159148 #10	ENSGT00940000162394 #11	ENSGT00940000155412.b #12	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143.c #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00390000003354 #7	ENSGT00390000001945 #8	ENSGT00640000091578 #9	ENSGT00940000159148 #10	ENSGT00940000162394 #11	ENSGT00940000155412.b #12	ENSGT00390000005065 #13	ENSGT00940000160969 #14	ENSGT00530000064158 #15	ENSGT00510000047802 #16	ENSGT00390000005100 #17	ENSGT01050000244887.A.a.a.b #18	ENSGT00390000014512 #19	ENSGT00940000162311 #20	ENSGT00940000162431 #21	ENSGT00940000162184 #22	ENSGT00470000042444 #23	ENSGT00940000161143.c #24	ENSGT00940000160550 #25	ENSGT00940000159869 #26	ENSGT00390000013443.c #27	ENSGT00940000159788.b #28	ENSGT00940000159543 #29	ENSGT01050000244887.A.a.a.a #30	ENSGT00530000063000.a.a.b #31	ENSGT00390000005605 #32	ENSGT00940000159801.B #33	ENSGT00940000159089 #34	ENSGT00940000158178 #35	ENSGT00940000156719 #36	ENSGT00530000063679.B #37
spretus	MODERN SPECIES	18	Fbxl12 (MGP_SPRETEiJ_G0032966) #7	Ubl5 (MGP_SPRETEiJ_G0032967) #8	Pin1 (MGP_SPRETEiJ_G0032968) #9	Olfm2 (MGP_SPRETEiJ_G0032969) #10	Col5a3 (MGP_SPRETEiJ_G0032970) #11	Rdh8 (MGP_SPRETEiJ_G0032971) #12	Shfl (MGP_SPRETEiJ_G0032972) #13	Angptl6 (MGP_SPRETEiJ_G0032973) #14	Ppan (MGP_SPRETEiJ_G0032974) #15	Eif3g (MGP_SPRETEiJ_G0032975) #16	Dnmt1 (MGP_SPRETEiJ_G0032976) #17	S1pr2 (MGP_SPRETEiJ_G0032977) #18	Mrpl4 (MGP_SPRETEiJ_G0032978) #19	Icam1 (MGP_SPRETEiJ_G0032979) #20	Icam4 (MGP_SPRETEiJ_G0032980) #21	Icam5 (MGP_SPRETEiJ_G0032981) #22	Zglp1 (MGP_SPRETEiJ_G0032982) #23	Fdx2 (MGP_SPRETEiJ_G0032983) #24	Raver1 (MGP_SPRETEiJ_G0032984) #25	Tyk2 (MGP_SPRETEiJ_G0032985) #26	Cdc37 (MGP_SPRETEiJ_G0032986) #27	Pde4a (MGP_SPRETEiJ_G0032987) #28	Keap1 (MGP_SPRETEiJ_G0032988) #29	S1pr5 (MGP_SPRETEiJ_G0032989) #30	Atg4d (MGP_SPRETEiJ_G0032990) #31	Kri1 (MGP_SPRETEiJ_G0032991) #32	Cdkn2d (MGP_SPRETEiJ_G0032992) #33	Ap1m2 (MGP_SPRETEiJ_G0032993) #34	Slc44a2 (MGP_SPRETEiJ_G0032994) #35	Ilf3 (MGP_SPRETEiJ_G0032995) #36	Qtrt1 (MGP_SPRETEiJ_G0032996) #37
Steppe mouse	MODERN SPECIES	3115	Fbxl12 (ENSMSIG00000017903) #7	Ubl5 (ENSMSIG00000017855) #8	Pin1 (ENSMSIG00000017849) #9	Olfm2 (ENSMSIG00000017812) #10	Col5a3 (ENSMSIG00000017680) #11	Rdh8 (ENSMSIG00000017665) #12	Shfl (ENSMSIG00000017630) #13	Angptl6 (ENSMSIG00000017615) #14	Ppan (ENSMSIG00000017577) #15	Eif3g (ENSMSIG00000017537) #16	Dnmt1 (ENSMSIG00000017200) #17	S1pr2 (ENSMSIG00000017197) #18	Mrpl4 (ENSMSIG00000017179) #19	Icam1 (ENSMSIG00000017165) #20	Icam4 (ENSMSIG00000017145) #21	Icam5 (ENSMSIG00000017102) #22	Zglp1 (ENSMSIG00000017087) #23	Fdx2 (ENSMSIG00000017053) #24	Raver1 (ENSMSIG00000017020) #25	Tyk2 (ENSMSIG00000016941) #26	Cdc37 (ENSMSIG00000016922) #27	Pde4a (ENSMSIG00000016751) #28	Keap1 (ENSMSIG00000016713) #29	S1pr5 (ENSMSIG00000016710) #30	Atg4d (ENSMSIG00000016653) #31	Kri1 (ENSMSIG00000016603) #32	Cdkn2d (ENSMSIG00000016582) #33	Ap1m2 (ENSMSIG00000016529) #34	Slc44a2 (ENSMSIG00000016395) #35	Ilf3 (ENSMSIG00000016302) #36	Qtrt1 (ENSMSIG00000016262) #37
Mouse	MODERN SPECIES	18	Fbxl12 (ENSMUSG00000066892) #7	Ubl5 (ENSMUSG00000084786) #8	Pin1 (ENSMUSG00000032171) #9	Olfm2 (ENSMUSG00000032172) #10	Col5a3 (ENSMUSG00000004098) #11	Rdh8 (ENSMUSG00000053773) #12	Shfl (ENSMUSG00000038884) #13	Angptl6 (ENSMUSG00000038742) #14	Ppan (ENSMUSG00000004100) #15	Eif3g (ENSMUSG00000070319) #16	Dnmt1 (ENSMUSG00000004099) #17	S1pr2 (ENSMUSG00000043895) #18	Mrpl4 (ENSMUSG00000003299) #19	Icam1 (ENSMUSG00000037405) #20	Icam4 (ENSMUSG00000001014) #21	Icam5 (ENSMUSG00000032174) #22	Zglp1 (ENSMUSG00000079681) #23	Fdx2 (ENSMUSG00000079677) #24	Raver1 (ENSMUSG00000010205) #25	Tyk2 (ENSMUSG00000032175) #26	Cdc37 (ENSMUSG00000019471) #27	Pde4a (ENSMUSG00000032177) #28	Keap1 (ENSMUSG00000003308) #29	S1pr5 (ENSMUSG00000045087) #30	Atg4d (ENSMUSG00000002820) #31	Kri1 (ENSMUSG00000035047) #32	Cdkn2d (ENSMUSG00000096472) #33	Ap1m2 (ENSMUSG00000003309) #34	Slc44a2 (ENSMUSG00000057193) #35	Ilf3 (ENSMUSG00000032178) #36	Qtrt1 (ENSMUSG00000002825) #37
Ryukyu mouse	MODERN SPECIES	18	Fbxl12 (MGP_CAROLIEiJ_G0031842) #7	MGP_CAROLIEiJ_G0031843	Pin1 (MGP_CAROLIEiJ_G0031844) #9	Olfm2 (MGP_CAROLIEiJ_G0031845) #10	Col5a3 (MGP_CAROLIEiJ_G0031846) #11	Rdh8 (MGP_CAROLIEiJ_G0031847) #12	Shfl (MGP_CAROLIEiJ_G0031848) #13	Angptl6 (MGP_CAROLIEiJ_G0031849) #14	Ppan (MGP_CAROLIEiJ_G0031850) #15	Eif3g (MGP_CAROLIEiJ_G0031851) #16	Dnmt1 (MGP_CAROLIEiJ_G0031852) #17	S1pr2 (MGP_CAROLIEiJ_G0031853) #18	Mrpl4 (MGP_CAROLIEiJ_G0031854) #19	Icam1 (MGP_CAROLIEiJ_G0031855) #20	Icam4 (MGP_CAROLIEiJ_G0031856) #21	Icam5 (MGP_CAROLIEiJ_G0031857) #22	Zglp1 (MGP_CAROLIEiJ_G0031858) #23	Fdx2 (MGP_CAROLIEiJ_G0031859) #24	Raver1 (MGP_CAROLIEiJ_G0031860) #25	Tyk2 (MGP_CAROLIEiJ_G0031861) #26	Cdc37 (MGP_CAROLIEiJ_G0031862) #27	Pde4a (MGP_CAROLIEiJ_G0031863) #28	Keap1 (MGP_CAROLIEiJ_G0031864) #29	S1pr5 (MGP_CAROLIEiJ_G0031865) #30	Atg4d (MGP_CAROLIEiJ_G0031866) #31	Kri1 (MGP_CAROLIEiJ_G0031867) #32	Cdkn2d (MGP_CAROLIEiJ_G0031868) #33	Ap1m2 (MGP_CAROLIEiJ_G0031869) #34	Slc44a2 (MGP_CAROLIEiJ_G0031870) #35	Ilf3 (MGP_CAROLIEiJ_G0031871) #36	Qtrt1 (MGP_CAROLIEiJ_G0031872) #37