Glires	ANCESTRAL SPECIES		ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00940000163135	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427 #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00990000205429	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37
Rodentia	DUPLICATION
Rodentia	ANCESTRAL SPECIES		ENSGT01000000214413.b.a.b.b.b #9	ENSGT00940000163135	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00990000205429	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Muroidea	ANCESTRAL SPECIES	3	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Murinae	ANCESTRAL SPECIES	2	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Mus	ANCESTRAL SPECIES	3	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00860000136239 #27	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00860000136239 #27	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00860000136239 #27	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37
spretus	MODERN SPECIES	13	Slc35e2 (MGP_SPRETEiJ_G0027886) #7	Nadk (MGP_SPRETEiJ_G0027885) #8	MGP_SPRETEiJ_G0027884 #9	Tmem52 (MGP_SPRETEiJ_G0027883) #10	Cfap74 (MGP_SPRETEiJ_G0027882) #11	Gabrd (MGP_SPRETEiJ_G0027881) #12	Prkcz (MGP_SPRETEiJ_G0027880) #13	Faap20 (MGP_SPRETEiJ_G0027879) #14	Ski (MGP_SPRETEiJ_G0027878) #15	Morn1 (MGP_SPRETEiJ_G0027877) #16	Rer1 (MGP_SPRETEiJ_G0027876) #17	Pex10 (MGP_SPRETEiJ_G0027875) #18	Plch2 (MGP_SPRETEiJ_G0027874) #19	Pank4 (MGP_SPRETEiJ_G0027873) #20	Hes5 (MGP_SPRETEiJ_G0027872) #21	Tnfrsf14 (MGP_SPRETEiJ_G0027871) #22	Prxl2b (MGP_SPRETEiJ_G0027870) #23	Mmel1 (MGP_SPRETEiJ_G0027869) #24	MGP_SPRETEiJ_G0027868 #25	Actrt2 (MGP_SPRETEiJ_G0027867) #26	MGP_SPRETEiJ_G0027866 #27	Prdm16 (MGP_SPRETEiJ_G0027865) #28	Arhgef16 (MGP_SPRETEiJ_G0027864) #29	Megf6 (MGP_SPRETEiJ_G0027863) #30	Tprgl (MGP_SPRETEiJ_G0027862) #31	Wrap73 (MGP_SPRETEiJ_G0027861) #32	Trp73 (MGP_SPRETEiJ_G0027860) #33	Ccdc27 (MGP_SPRETEiJ_G0027859) #34	Smim1 (MGP_SPRETEiJ_G0027858) #35	Lrrc47 (MGP_SPRETEiJ_G0027857) #36	Cep104 (MGP_SPRETEiJ_G0027856) #37
Steppe mouse	MODERN SPECIES	3338						Prkcz (ENSMSIG00000016904) #13	ENSMSIG00000016849 #14	Ski (ENSMSIG00000016784) #15	Morn1 (ENSMSIG00000016759) #16	ENSMSIG00000016715 #17	Pex10 (ENSMSIG00000016702) #18	ENSMSIG00000016697	Plch2 (ENSMSIG00000016342) #19	Pank4 (ENSMSIG00000016251) #20	ENSMSIG00000016236 #21	Tnfrsf14 (ENSMSIG00000016183) #22	Prxl2b (ENSMSIG00000016156) #23	Mmel1 (ENSMSIG00000015971) #24	ENSMSIG00000015948 #25	Actrt2 (ENSMSIG00000015935) #26	ENSMSIG00000015908 #27	Prdm16 (ENSMSIG00000015349) #28	Arhgef16 (ENSMSIG00000015285) #29	Megf6 (ENSMSIG00000015184) #30	ENSMSIG00000015161 #31	Wrap73 (ENSMSIG00000015120) #32	Trp73 (ENSMSIG00000014841) #33	Ccdc27 (ENSMSIG00000014782) #34	Smim1 (ENSMSIG00000014746) #35	ENSMSIG00000014737	Lrrc47 (ENSMSIG00000014708) #36
Mouse	MODERN SPECIES	13	Slc35e2 (ENSMUSG00000042202) #7	Nadk (ENSMUSG00000029063) #8	Gnb1 (ENSMUSG00000029064) #9	Tmem52 (ENSMUSG00000023153) #10	Cfap74 (ENSMUSG00000078490) #11	Gabrd (ENSMUSG00000029054) #12	Prkcz (ENSMUSG00000029053) #13	Faap20 (ENSMUSG00000073684) #14	Ski (ENSMUSG00000029050) #15	Morn1 (ENSMUSG00000029049) #16	Rer1 (ENSMUSG00000029048) #17	Pex10 (ENSMUSG00000029047) #18	Plch2 (ENSMUSG00000029055) #19	Pank4 (ENSMUSG00000029056) #20	Hes5 (ENSMUSG00000048001) #21	Tnfrsf14 (ENSMUSG00000042333) #22	Prxl2b (ENSMUSG00000029059) #23	Mmel1 (ENSMUSG00000058183) #24	Ttc34 (ENSMUSG00000046637) #25	Actrt2 (ENSMUSG00000051276) #26	Prdm16 (ENSMUSG00000039410) #28	Arhgef16 (ENSMUSG00000029032) #29	Megf6 (ENSMUSG00000057751) #30	Tprgl (ENSMUSG00000029030) #31	Wrap73 (ENSMUSG00000029029) #32	Trp73 (ENSMUSG00000029026) #33	Ccdc27 (ENSMUSG00000039492) #34	Smim1 (ENSMUSG00000078350) #35	Lrrc47 (ENSMUSG00000029028) #36	Cep104 (ENSMUSG00000039523) #37	Dffb (ENSMUSG00000029027)
Ryukyu mouse	MODERN SPECIES	13	Slc35e2 (MGP_CAROLIEiJ_G0026893) #7	Nadk (MGP_CAROLIEiJ_G0026892) #8	Gnb1 (MGP_CAROLIEiJ_G0026891) #9	Tmem52 (MGP_CAROLIEiJ_G0026890) #10	Cfap74 (MGP_CAROLIEiJ_G0026889) #11	Gabrd (MGP_CAROLIEiJ_G0026888) #12	Prkcz (MGP_CAROLIEiJ_G0026887) #13	Faap20 (MGP_CAROLIEiJ_G0026886) #14	Ski (MGP_CAROLIEiJ_G0026885) #15	Morn1 (MGP_CAROLIEiJ_G0026884) #16	Rer1 (MGP_CAROLIEiJ_G0026883) #17	Pex10 (MGP_CAROLIEiJ_G0026882) #18	Plch2 (MGP_CAROLIEiJ_G0026881) #19	Pank4 (MGP_CAROLIEiJ_G0026880) #20	Hes5 (MGP_CAROLIEiJ_G0026879) #21	Tnfrsf14 (MGP_CAROLIEiJ_G0026878) #22	Prxl2b (MGP_CAROLIEiJ_G0026877) #23	Mmel1 (MGP_CAROLIEiJ_G0026876) #24	MGP_CAROLIEiJ_G0026875 #25	Actrt2 (MGP_CAROLIEiJ_G0026874) #26	MGP_CAROLIEiJ_G0026873 #27	Prdm16 (MGP_CAROLIEiJ_G0026872) #28	Arhgef16 (MGP_CAROLIEiJ_G0026871) #29	Megf6 (MGP_CAROLIEiJ_G0026870) #30	Tprgl (MGP_CAROLIEiJ_G0026869) #31	Wrap73 (MGP_CAROLIEiJ_G0026868) #32	Trp73 (MGP_CAROLIEiJ_G0026867) #33	Ccdc27 (MGP_CAROLIEiJ_G0026866) #34	Smim1 (MGP_CAROLIEiJ_G0026865) #35	Lrrc47 (MGP_CAROLIEiJ_G0026864) #36	Cep104 (MGP_CAROLIEiJ_G0026863) #37
Shrew mouse	MODERN SPECIES	19	Slc35e2 (MGP_PahariEiJ_G0029241) #7	Nadk (MGP_PahariEiJ_G0029240) #8	Gnb1 (MGP_PahariEiJ_G0029239) #9	Tmem52 (MGP_PahariEiJ_G0029238) #10	Cfap74 (MGP_PahariEiJ_G0029237) #11	Gabrd (MGP_PahariEiJ_G0029236) #12	Prkcz (MGP_PahariEiJ_G0029235) #13	Faap20 (MGP_PahariEiJ_G0029234) #14	Ski (MGP_PahariEiJ_G0029233) #15	Morn1 (MGP_PahariEiJ_G0029232) #16	Rer1 (MGP_PahariEiJ_G0029231) #17	MGP_PahariEiJ_G0029230 #18	Plch2 (MGP_PahariEiJ_G0029229) #19	Pank4 (MGP_PahariEiJ_G0029228) #20	Hes5 (MGP_PahariEiJ_G0029227) #21	Tnfrsf14 (MGP_PahariEiJ_G0029226) #22	Prxl2b (MGP_PahariEiJ_G0029225) #23	Mmel1 (MGP_PahariEiJ_G0029224) #24	MGP_PahariEiJ_G0029223 #25	Actrt2 (MGP_PahariEiJ_G0029222) #26	MGP_PahariEiJ_G0029221 #27	Prdm16 (MGP_PahariEiJ_G0029220) #28	MGP_PahariEiJ_G0029219 ##29	Megf6 (MGP_PahariEiJ_G0029218) #30	Tprgl (MGP_PahariEiJ_G0029217) #31	Wrap73 (MGP_PahariEiJ_G0029216) #32	Trp73 (MGP_PahariEiJ_G0029215) #33	Ccdc27 (MGP_PahariEiJ_G0029214) #34	Smim1 (MGP_PahariEiJ_G0029213) #35	Lrrc47 (MGP_PahariEiJ_G0029212) #36	Cep104 (MGP_PahariEiJ_G0029211) #37
Rat	MODERN SPECIES	15	Slc35e2b (ENSRNOG00000017075) #7	Nadk (ENSRNOG00000016936) #8	Gnb1 (ENSRNOG00000016638) #9	Tmem52 (ENSRNOG00000016618) #10	Cfap74 (ENSRNOG00000023627) #11	Gabrd (ENSRNOG00000016385) #12	Prkcz (ENSRNOG00000015480) #13	Faap20 (ENSRNOG00000036876) #14	Ski (ENSRNOG00000055340) #15	Morn1 (ENSRNOG00000014642) #16	Rer1 (ENSRNOG00000014270) #17	Pex10 (ENSRNOG00000024012) #18	Plch2 (ENSRNOG00000014226) #19	Pank4 (ENSRNOG00000014044) #20	Hes5 (ENSRNOG00000013850) #21	Tnfrsf14 (ENSRNOG00000013820) #22	Mmel1 (ENSRNOG00000012593) #24	Ttc34 (ENSRNOG00000024526) #25	Actrt2 (ENSRNOG00000012586) #26	Prdm16 (ENSRNOG00000045913) #28	Arhgef16 (ENSRNOG00000046803) #29	Megf6 (ENSRNOG00000000156) #30	Tprg1l (ENSRNOG00000046227) #31	Wrap73 (ENSRNOG00000014805) #32	Tp73 (ENSRNOG00000024707) #33	Ccdc27 (ENSRNOG00000056358) #34	Lrrc47 (ENSRNOG00000024796) #36	Cep104 (ENSRNOG00000025000) #37	Dffb (ENSRNOG00000025030)	C5h1orf174 (ENSRNOG00000025034)	ENSRNOG00000070793
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000159351 #7	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Chinese hamster chok1gshd	MODERN SPECIES	111	Slc35e2 (ENSCGRG00001024737) #7	Nadk (ENSCGRG00001011736) #8	Gnb1 (ENSCGRG00001007395) #9	Tmem52 (ENSCGRG00001009699) #10	Cfap74 (ENSCGRG00001014741) #11	Gabrd (ENSCGRG00001021009) #12	Prkcz (ENSCGRG00001024893) #13	Faap20 (ENSCGRG00001022232) #14	Ski (ENSCGRG00001024094) #15	ENSCGRG00001003559 #16	Rer1 (ENSCGRG00001007835) #17	Pex10 (ENSCGRG00001012170) #18	Plch2 (ENSCGRG00001014670) #19	Pank4 (ENSCGRG00001013559) #20	Hes5 (ENSCGRG00001019237) #21	Tnfrsf14 (ENSCGRG00001021526) #22	Prxl2b (ENSCGRG00001011082) #23	Mmel1 (ENSCGRG00001017259) #24	Ttc34 (ENSCGRG00001015000) #25	Actrt2 (ENSCGRG00001009403) #26	Prdm16 (ENSCGRG00001019996) #28	Arhgef16 (ENSCGRG00001024869) #29	Megf6 (ENSCGRG00001013362) #30	ENSCGRG00001003753 #31	Wrap73 (ENSCGRG00001011691) #32	Trp73 (ENSCGRG00001024993) #33	Ccdc27 (ENSCGRG00001016508) #34	Smim1 (ENSCGRG00001024815) #35	Lrrc47 (ENSCGRG00001015159) #36	Cep104 (ENSCGRG00001019492) #37	Dffb (ENSCGRG00001021674)
Golden Hamster	MODERN SPECIES	707	Slc35e2 (ENSMAUG00000001841) #7	ENSMAUG00000002980	ENSMAUG00000012499 #9	ENSMAUG00000019524 #10	ENSMAUG00000001349 #11	Gabrd (ENSMAUG00000010719) #12	Prkcz (ENSMAUG00000016289) #13	Faap20 (ENSMAUG00000014116) #14	Ski (ENSMAUG00000013967) #15	Morn1 (ENSMAUG00000019189) #16	Rer1 (ENSMAUG00000014876) #17	Pex10 (ENSMAUG00000011441) #18	Plch2 (ENSMAUG00000010595) #19	Pank4 (ENSMAUG00000006368) #20	Hes5 (ENSMAUG00000019730) #21	ENSMAUG00000009380 #22	Prxl2b (ENSMAUG00000008466) #23	Mmel1 (ENSMAUG00000002020) #24	Ttc34 (ENSMAUG00000013133) #25	Actrt2 (ENSMAUG00000010034) #26	Prdm16 (ENSMAUG00000015516) #28	Arhgef16 (ENSMAUG00000010145) #29	Megf6 (ENSMAUG00000018435) #30	Tprgl (ENSMAUG00000019986) #31	Wrap73 (ENSMAUG00000002232) #32	ENSMAUG00000021905	ENSMAUG00000010480 #33	Ccdc27 (ENSMAUG00000020562) #34	Smim1 (ENSMAUG00000021424) #35	Lrrc47 (ENSMAUG00000021337) #36	Cep104 (ENSMAUG00000008944) #37
Cricetidae_B	ANCESTRAL SPECIES	30	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Prairie vole	MODERN SPECIES	121	Slc35e2 (ENSMOCG00000021510) #7	Nadk (ENSMOCG00000021667) #8	Gnb1 (ENSMOCG00000018378) #9	Tmem52 (ENSMOCG00000016197) #10	Cfap74 (ENSMOCG00000013475) #11	Gabrd (ENSMOCG00000008574) #12	Prkcz (ENSMOCG00000009286) #13	Faap20 (ENSMOCG00000008887) #14	Ski (ENSMOCG00000019213) #15	Morn1 (ENSMOCG00000014695) #16	Rer1 (ENSMOCG00000019879) #17	Pex10 (ENSMOCG00000015729) #18	Plch2 (ENSMOCG00000016001) #19	Pank4 (ENSMOCG00000016061) #20	Hes5 (ENSMOCG00000012587) #21	Tnfrsf14 (ENSMOCG00000017973) #22	Prxl2b (ENSMOCG00000003454) #23	Mmel1 (ENSMOCG00000019811) #24	Ttc34 (ENSMOCG00000006462) #25	Actrt2 (ENSMOCG00000002363) #26	Prdm16 (ENSMOCG00000017346) #28	Arhgef16 (ENSMOCG00000007705) #29	Megf6 (ENSMOCG00000017567) #30	Tprgl (ENSMOCG00000014008) #31	Wrap73 (ENSMOCG00000011506) #32	Trp73 (ENSMOCG00000009005) #33	Ccdc27 (ENSMOCG00000022851) #34	Smim1 (ENSMOCG00000002244) #35	Lrrc47 (ENSMOCG00000021279) #36	Cep104 (ENSMOCG00000015310) #37	Dffb (ENSMOCG00000014645)
Northern American deer mouse	MODERN SPECIES	11	Slc35e2 (ENSPEMG00000015650) #7	Nadk (ENSPEMG00000015315) #8	Gnb1 (ENSPEMG00000012387) #9	Tmem52 (ENSPEMG00000026088) #10	Cfap74 (ENSPEMG00000015431) #11	Gabrd (ENSPEMG00000018688) #12	Prkcz (ENSPEMG00000009397) #13	Faap20 (ENSPEMG00000018960) #14	Morn1 (ENSPEMG00000017670) #16	ENSPEMG00000003886 #17	Pex10 (ENSPEMG00000015193) #18	ENSPEMG00000026479	Plch2 (ENSPEMG00000017157) #19	Pank4 (ENSPEMG00000018726) #20	Hes5 (ENSPEMG00000031266) #21	Tnfrsf14 (ENSPEMG00000016250) #22	Prxl2b (ENSPEMG00000016639) #23	Mmel1 (ENSPEMG00000015360) #24	ENSPEMG00000003914 #25	Actrt2 (ENSPEMG00000014225) #26	ENSPEMG00000027963	Pramel12 (ENSPEMG00000023636)	ENSPEMG00000025426	Pramel1 (ENSPEMG00000021753)	Lrrc38 (ENSPEMG00000027448)	Pdpn (ENSPEMG00000007524)	Prdm2 (ENSPEMG00000023130)	ENSPEMG00000028452	Kazn (ENSPEMG00000021311)	Tmem51 (ENSPEMG00000031341)	Fhad1 (ENSPEMG00000005222) ##34
Lesser Egyptian jerboa	MODERN SPECIES	63	ENSJJAG00000019714 #8	Gnb1 (ENSJJAG00000022166) #9	Tmem52 (ENSJJAG00000020193) #10	ENSJJAG00000020981 #11	ENSJJAG00000017787	Gabrd (ENSJJAG00000018720) #12	Prkcz (ENSJJAG00000017774) #13	Faap20 (ENSJJAG00000017459) #14	Ski (ENSJJAG00000020861) #15	ENSJJAG00000017446 #16	Rer1 (ENSJJAG00000018634) #17	Pex10 (ENSJJAG00000017321) #18	Plch2 (ENSJJAG00000020118) #19	Pank4 (ENSJJAG00000018242) #20	Hes5 (ENSJJAG00000017831) #21	Tnfrsf14 (ENSJJAG00000021255) #22	Prxl2b (ENSJJAG00000018745) #23	Mmel1 (ENSJJAG00000018082) #24	Ttc34 (ENSJJAG00000016707) #25	Actrt2 (ENSJJAG00000005857) #26	Prdm16 (ENSJJAG00000001571) #28	Arhgef16 (ENSJJAG00000017609) #29	Megf6 (ENSJJAG00000023287) #30	Tprgl (ENSJJAG00000016930) #31	Wrap73 (ENSJJAG00000017311) #32	Trp73 (ENSJJAG00000016220) #33	Ccdc27 (ENSJJAG00000021071) #34	Smim1 (ENSJJAG00000023020) #35	Lrrc47 (ENSJJAG00000017474) #36	Cep104 (ENSJJAG00000017892) #37	Dffb (ENSJJAG00000014494)
Rodentia_A	ANCESTRAL SPECIES		ENSGT01000000214413.b.a.b.b.b #9	ENSGT00940000163135	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00990000205429	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37
Sciuridae	ANCESTRAL SPECIES	3	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00940000163135	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT01060000251964	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00990000205429	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37
Marmotini	ANCESTRAL SPECIES		ENSGT00390000013792.e #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00940000163135	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Alpin marmot	MODERN SPECIES	73	ENSMMMG00000019177	SLC35E2B (ENSMMMG00000019163) #7	NADK (ENSMMMG00000019153) #8	GNB1 (ENSMMMG00000019141) #9	CALML6 (ENSMMMG00000019136)	TMEM52 (ENSMMMG00000019122) #10	ENSMMMG00000019112 #11	GABRD (ENSMMMG00000019103) #12	PRKCZ (ENSMMMG00000019084) #13	ENSMMMG00000019075 #14	MORN1 (ENSMMMG00000019043) #16	RER1 (ENSMMMG00000019040) #17	PEX10 (ENSMMMG00000019038) #18	ENSMMMG00000018967 #19	PANK4 (ENSMMMG00000018933) #20	ENSMMMG00000018925 #22	PRXL2B (ENSMMMG00000018906) #23	MMEL1 (ENSMMMG00000018721) #24	ENSMMMG00000018716 #25	ACTRT2 (ENSMMMG00000018703) #26	PRDM16 (ENSMMMG00000018678) #28	ARHGEF16 (ENSMMMG00000018653) #29	MEGF6 (ENSMMMG00000018617) #30	TPRG1L (ENSMMMG00000018599) #31	WRAP73 (ENSMMMG00000018591) #32	TP73 (ENSMMMG00000018532) #33	CCDC27 (ENSMMMG00000018503) #34	SMIM1 (ENSMMMG00000018496) #35	LRRC47 (ENSMMMG00000018476) #36	CEP104 (ENSMMMG00000018452) #37	DFFB (ENSMMMG00000018370)
Marmotini_b	ANCESTRAL SPECIES	81	ENSGT00390000013792.e #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00940000163135	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490	ENSGT00390000016496
Arctic ground squirrel	MODERN SPECIES	772							PRKCZ (ENSUPAG00010004383) #13	ENSUPAG00010004379 #14	SKI (ENSUPAG00010004373) #15	MORN1 (ENSUPAG00010004348) #16	RER1 (ENSUPAG00010004325) #17	PEX10 (ENSUPAG00010004322) #18	PLCH2 (ENSUPAG00010004271) #19	PANK4 (ENSUPAG00010004247) #20	HES5 (ENSUPAG00010004237) #21	ENSUPAG00010004222 #22	PRXL2B (ENSUPAG00010004212) #23	MMEL1 (ENSUPAG00010003827) #24
Eurasian red squirrel	MODERN SPECIES		GNB1 (ENSSVLG00005000043) #9	CALML6 (ENSSVLG00005000045)	TMEM52 (ENSSVLG00005000046) #10	CFAP74 (ENSSVLG00005000047) #11	GABRD (ENSSVLG00005000048) #12	PRKCZ (ENSSVLG00005000049) #13	FAAP20 (ENSSVLG00005000050) #14	SKI (ENSSVLG00005000051) #15	MORN1 (ENSSVLG00005000052) #16	RER1 (ENSSVLG00005000056) #17	PEX10 (ENSSVLG00005000064) #18	ENSSVLG00005000069	PLCH2 (ENSSVLG00005000075) #19	PANK4 (ENSSVLG00005000078) #20	HES5 (ENSSVLG00005000079) #21	ENSSVLG00005000080 #22	PRXL2B (ENSSVLG00005000081) #23	MMEL1 (ENSSVLG00005000083) #24	ENSSVLG00005000084 #25	ACTRT2 (ENSSVLG00005000085) #26	PRDM16 (ENSSVLG00005000086) #28	ARHGEF16 (ENSSVLG00005000087) #29	MEGF6 (ENSSVLG00005000091) #30	TPRG1L (ENSSVLG00005000096) #31	WRAP73 (ENSSVLG00005000098) #32	TP73 (ENSSVLG00005000108) #33	ENSSVLG00005000129	ENSSVLG00005000137 #34	SMIM1 (ENSSVLG00005000145) #35	LRRC47 (ENSSVLG00005000150) #36	CEP104 (ENSSVLG00005000156) #37
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00940000159351 #7	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00940000159351 #7	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Hystricomorpha_b	ANCESTRAL SPECIES	47	ENSGT00940000159351 #7	ENSGT00390000013792 #8	ENSGT01000000214413.b.a.b.b.b #9	ENSGT00730000111432 #10	ENSGT00900000141054 #11	ENSGT00940000160122 #12	ENSGT00940000153497.A #13	ENSGT00390000010531 #14	ENSGT00940000160546 #15	ENSGT00940000161806 #16	ENSGT00510000047137 #17	ENSGT00510000048446 #18	ENSGT00940000158374 #19	ENSGT00940000158896 #20	ENSGT00940000162836 #21	ENSGT00940000162427.i #22	ENSGT00940000162566 #23	ENSGT00940000157799 #24	ENSGT00390000003047.d #25	ENSGT00940000162911 #26	ENSGT00940000160951 #28	ENSGT01030000234571.a.b #29	ENSGT00940000156971.B.ab #30	ENSGT00390000001652.f.a #31	ENSGT00390000003623 #32	ENSGT00950000183153.c.b.a.b #33	ENSGT00940000154171.B #34	ENSGT00520000060291 #35	ENSGT00530000063489.b #36	ENSGT00390000013405 #37	ENSGT00390000014490
Long-tailed chinchilla	MODERN SPECIES	193	SLC35E2B (ENSCLAG00000006943) #7	NADK (ENSCLAG00000006095) #8	GNB1 (ENSCLAG00000007026) #9	TMEM52 (ENSCLAG00000004850) #10	CFAP74 (ENSCLAG00000006157) #11	GABRD (ENSCLAG00000006415) #12	PRKCZ (ENSCLAG00000005910) #13	ENSCLAG00000004738 #14	SKI (ENSCLAG00000006902) #15	MORN1 (ENSCLAG00000005881) #16	RER1 (ENSCLAG00000004419) #17	PEX10 (ENSCLAG00000010114) #18	PLCH2 (ENSCLAG00000014474) #19	PANK4 (ENSCLAG00000006749) #20	HES5 (ENSCLAG00000006249) #21	ENSCLAG00000005555 #22	PRXL2B (ENSCLAG00000004683) #23	MMEL1 (ENSCLAG00000005873) #24	ENSCLAG00000005188 #25	ACTRT2 (ENSCLAG00000017641) #26	PRDM16 (ENSCLAG00000011378) #28	ARHGEF16 (ENSCLAG00000007871) #29	MEGF6 (ENSCLAG00000007080) #30	TPRG1L (ENSCLAG00000010071) #31	WRAP73 (ENSCLAG00000008882) #32	TP73 (ENSCLAG00000004583) #33	ENSCLAG00000006385 #34	SMIM1 (ENSCLAG00000007118) #35	LRRC47 (ENSCLAG00000006093) #36	CEP104 (ENSCLAG00000007114) #37	DFFB (ENSCLAG00000006574)
Degu	MODERN SPECIES	154	ENSODEG00000010865	SLC35E2B (ENSODEG00000008487) #7	NADK (ENSODEG00000009926) #8	ENSODEG00000009565 #9	TMEM52 (ENSODEG00000009171) #10	CFAP74 (ENSODEG00000010453) #11	GABRD (ENSODEG00000009691) #12	PRKCZ (ENSODEG00000011328) #13	SKI (ENSODEG00000008763) #15	ENSODEG00000009345 #16	RER1 (ENSODEG00000009663) #17	PEX10 (ENSODEG00000009998) #18	PLCH2 (ENSODEG00000009322) #19	PANK4 (ENSODEG00000014680) #20	HES5 (ENSODEG00000009552) #21	ENSODEG00000009852 #22	PRXL2B (ENSODEG00000010975) #23	MMEL1 (ENSODEG00000010714) #24	TTC34 (ENSODEG00000010598) #25	ACTRT2 (ENSODEG00000019932) #26	PRDM16 (ENSODEG00000010377) #28	ARHGEF16 (ENSODEG00000010411) #29	MEGF6 (ENSODEG00000009785) #30	TPRG1L (ENSODEG00000010589) #31	WRAP73 (ENSODEG00000010067) #32	TP73 (ENSODEG00000009639) #33	SMIM1 (ENSODEG00000010084) #35	LRRC47 (ENSODEG00000010882) #36	CEP104 (ENSODEG00000011932) #37	DFFB (ENSODEG00000011068)	C1orf174 (ENSODEG00000010932)
Guinea pig	MODERN SPECIES	184	ENSCPOG00000009457	SLC35E2B (ENSCPOG00000035097) #7	NADK (ENSCPOG00000035655) #8	GNB1 (ENSCPOG00000005544) #9	TMEM52 (ENSCPOG00000036151) #10	CFAP74 (ENSCPOG00000020269) #11	GABRD (ENSCPOG00000002583) #12	PRKCZ (ENSCPOG00000013852) #13	SKI (ENSCPOG00000006210) #15	ENSCPOG00000000350 #16	RER1 (ENSCPOG00000009015) #17	PEX10 (ENSCPOG00000020790) #18	PLCH2 (ENSCPOG00000019364) #19	PANK4 (ENSCPOG00000007326) #20	HES5 (ENSCPOG00000036237) #21	Tnfrsf14 (ENSCPOG00000009228) #22	PRXL2B (ENSCPOG00000026782) #23	MMEL1 (ENSCPOG00000010003) #24	ENSCPOG00000025630 #25	ACTRT2 (ENSCPOG00000026644) #26
Rodentia	ANCESTRAL SPECIES																	ENSGT00940000162427.j ##22
Rodentia_B	ANCESTRAL SPECIES																	ENSGT00940000162427.j ##22
Myomorpha	ANCESTRAL SPECIES																	ENSGT00940000162427.j ##22
Muroidea	ANCESTRAL SPECIES																	ENSGT00940000162427.j ##22
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000161406	ENSGT00900000141143	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000162737	ENSGT00940000160930	ENSGT00940000158607	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860	ENSGT00940000162427.j ##22	ENSGT00940000158918	ENSGT00940000162387	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00530000063672.b	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000157176	ENSGT00390000017162
Murinae	ANCESTRAL SPECIES	16	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000161406	ENSGT00900000141143	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000162737	ENSGT00940000160930	ENSGT00940000158607	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860	ENSGT00940000162427.j ##22	ENSGT00940000158918	ENSGT00940000162387	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00530000063672.b	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000157176	ENSGT00390000017162
Mus	ANCESTRAL SPECIES	8	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000161406	ENSGT00900000141143	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000162737	ENSGT00940000160930	ENSGT00940000158607	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860	ENSGT00940000162427.j ##22	ENSGT00940000158918	ENSGT00940000162387	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00530000063672.b	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000157176	ENSGT00390000017162
Mus_A	ANCESTRAL SPECIES	12	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000161406	ENSGT00900000141143	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000162737	ENSGT00940000160930	ENSGT00940000158607	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860	ENSGT00940000162427.j ##22	ENSGT00940000158918	ENSGT00940000162387	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00530000063672.b	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000157176	ENSGT00390000017162
Mus_B	ANCESTRAL SPECIES	11	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000161406	ENSGT00900000141143	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000162737	ENSGT00940000160930	ENSGT00940000158607	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860	ENSGT00940000162427.j ##22	ENSGT00940000158918	ENSGT00940000162387	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00530000063672.b	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000157176	ENSGT00390000017162
Mouse	MODERN SPECIES	5	Adam7 (ENSMUSG00000022056)	Adamdec1 (ENSMUSG00000022057)	Adam28 (ENSMUSG00000014725)	Stc1 (ENSMUSG00000014813)	Nkx2-6 (ENSMUSG00000044186)	Nkx3-1 (ENSMUSG00000022061)	Slc25a37 (ENSMUSG00000034248)	Synb (ENSMUSG00000047977)	Entpd4 (ENSMUSG00000095463)	Gm16867 (ENSMUSG00000093954)	Gm27179 (ENSMUSG00000098773)	Entpd4b (ENSMUSG00000022066)	Loxl2 (ENSMUSG00000034205)	R3hcc1 (ENSMUSG00000034194)	Chmp7 (ENSMUSG00000034190)	Tnfrsf10b (ENSMUSG00000022074) ##22	Rhobtb2 (ENSMUSG00000022075)	Pebp4 (ENSMUSG00000022085)	Egr3 (ENSMUSG00000033730)	Bin3 (ENSMUSG00000022089)	Ccar2 (ENSMUSG00000033712)	9930012K11Rik (ENSMUSG00000044551)	Pdlim2 (ENSMUSG00000022090)	Sorbs3 (ENSMUSG00000022091)	Ppp3cc (ENSMUSG00000022092)	Slc39a14 (ENSMUSG00000022094)	Piwil2 (ENSMUSG00000033644)	Polr3d (ENSMUSG00000000776)	Phyhip (ENSMUSG00000003469)	Bmp1 (ENSMUSG00000022098)	Sftpc (ENSMUSG00000022097)
Mus_C	ANCESTRAL SPECIES	20	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b	ENSGT00940000161406	ENSGT00900000141143	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000162737	ENSGT00940000160930	ENSGT00940000158607	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860	ENSGT00940000162427.j ##22	ENSGT00940000158918	ENSGT00940000162387	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00530000063672.b	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000157176	ENSGT00390000017162
spretus	MODERN SPECIES	5	Nefl (MGP_SPRETEiJ_G0020345)	Adam7 (MGP_SPRETEiJ_G0020346)	Adamdec1 (MGP_SPRETEiJ_G0020347)	Adam28 (MGP_SPRETEiJ_G0020348)	Stc1 (MGP_SPRETEiJ_G0020349)	Nkx2-6 (MGP_SPRETEiJ_G0020350)	Nkx3-1 (MGP_SPRETEiJ_G0020351)	Slc25a37 (MGP_SPRETEiJ_G0020352)	MGP_SPRETEiJ_G0020354	MGP_SPRETEiJ_G0020355	MGP_SPRETEiJ_G0020356	MGP_SPRETEiJ_G0020357	Loxl2 (MGP_SPRETEiJ_G0020358)	R3hcc1 (MGP_SPRETEiJ_G0020359)	Chmp7 (MGP_SPRETEiJ_G0020360)	Tnfrsf10b (MGP_SPRETEiJ_G0020361) ##22	Rhobtb2 (MGP_SPRETEiJ_G0020362)	Pebp4 (MGP_SPRETEiJ_G0020363)	Egr3 (MGP_SPRETEiJ_G0020364)	Bin3 (MGP_SPRETEiJ_G0020365)	Ccar2 (MGP_SPRETEiJ_G0020366)	9930012K11Rik (MGP_SPRETEiJ_G0020367)	Pdlim2 (MGP_SPRETEiJ_G0020368)	Sorbs3 (MGP_SPRETEiJ_G0020369)	Ppp3cc (MGP_SPRETEiJ_G0020370)	Slc39a14 (MGP_SPRETEiJ_G0020371)	Piwil2 (MGP_SPRETEiJ_G0020372)	Polr3d (MGP_SPRETEiJ_G0020373)	Phyhip (MGP_SPRETEiJ_G0020374)	Bmp1 (MGP_SPRETEiJ_G0020375)	Sftpc (MGP_SPRETEiJ_G0020376)
Steppe mouse	MODERN SPECIES	3084	ENSMSIG00000024304	Adam7 (ENSMSIG00000024335)	Adamdec1 (ENSMSIG00000024360)	Adam28 (ENSMSIG00000024389)	Stc1 (ENSMSIG00000024577)	ENSMSIG00000024592	Nkx2-6 (ENSMSIG00000024600)	Nkx3-1 (ENSMSIG00000024609)	Slc25a37 (ENSMSIG00000024616)	ENSMSIG00000024627	ENSMSIG00000024639	Loxl2 (ENSMSIG00000024664)	R3hcc1 (ENSMSIG00000024698)	Chmp7 (ENSMSIG00000024716)	ENSMSIG00000024730	Tnfrsf10b (ENSMSIG00000024749) ##22	Rhobtb2 (ENSMSIG00000024755)	ENSMSIG00000024803	ENSMSIG00000024806
Ryukyu mouse	MODERN SPECIES	5	Adam7 (MGP_CAROLIEiJ_G0019454)	Adamdec1 (MGP_CAROLIEiJ_G0019455)	Adam28 (MGP_CAROLIEiJ_G0019456)	Stc1 (MGP_CAROLIEiJ_G0019457)	Nkx2-6 (MGP_CAROLIEiJ_G0019458)	Nkx3-1 (MGP_CAROLIEiJ_G0019459)	Slc25a37 (MGP_CAROLIEiJ_G0019460)	MGP_CAROLIEiJ_G0019461	MGP_CAROLIEiJ_G0019462	MGP_CAROLIEiJ_G0019463	MGP_CAROLIEiJ_G0019464	MGP_CAROLIEiJ_G0019465	Loxl2 (MGP_CAROLIEiJ_G0019466)	R3hcc1 (MGP_CAROLIEiJ_G0019467)	Chmp7 (MGP_CAROLIEiJ_G0019468)	MGP_CAROLIEiJ_G0019469 ##22	Rhobtb2 (MGP_CAROLIEiJ_G0019470)	Pebp4 (MGP_CAROLIEiJ_G0019471)	Egr3 (MGP_CAROLIEiJ_G0019472)	Bin3 (MGP_CAROLIEiJ_G0019473)	Ccar2 (MGP_CAROLIEiJ_G0019474)	9930012K11Rik (MGP_CAROLIEiJ_G0019475)	Pdlim2 (MGP_CAROLIEiJ_G0019476)	Sorbs3 (MGP_CAROLIEiJ_G0019477)	Ppp3cc (MGP_CAROLIEiJ_G0019478)	Slc39a14 (MGP_CAROLIEiJ_G0019479)	Piwil2 (MGP_CAROLIEiJ_G0019480)	Polr3d (MGP_CAROLIEiJ_G0019481)	Phyhip (MGP_CAROLIEiJ_G0019482)	Bmp1 (MGP_CAROLIEiJ_G0019483)	Sftpc (MGP_CAROLIEiJ_G0019484)
Shrew mouse	MODERN SPECIES	21	Adam7 (MGP_PahariEiJ_G0030471)	Adamdec1 (MGP_PahariEiJ_G0030472)	Adam28 (MGP_PahariEiJ_G0030473)	Stc1 (MGP_PahariEiJ_G0030474)	MGP_PahariEiJ_G0030475	Nkx3-1 (MGP_PahariEiJ_G0030476)	Slc25a37 (MGP_PahariEiJ_G0030477)	MGP_PahariEiJ_G0030478	MGP_PahariEiJ_G0030479	MGP_PahariEiJ_G0030480	MGP_PahariEiJ_G0030481	MGP_PahariEiJ_G0030482	Loxl2 (MGP_PahariEiJ_G0030483)	R3hcc1 (MGP_PahariEiJ_G0030484)	Chmp7 (MGP_PahariEiJ_G0030485)	MGP_PahariEiJ_G0030486 ##22	Rhobtb2 (MGP_PahariEiJ_G0030487)	Pebp4 (MGP_PahariEiJ_G0030488)	Egr3 (MGP_PahariEiJ_G0030489)	Bin3 (MGP_PahariEiJ_G0030490)	Ccar2 (MGP_PahariEiJ_G0030491)	9930012K11Rik (MGP_PahariEiJ_G0030492)	Pdlim2 (MGP_PahariEiJ_G0030493)	Sorbs3 (MGP_PahariEiJ_G0030494)	Ppp3cc (MGP_PahariEiJ_G0030495)	Slc39a14 (MGP_PahariEiJ_G0030496)	Piwil2 (MGP_PahariEiJ_G0030497)	Polr3d (MGP_PahariEiJ_G0030498)	Phyhip (MGP_PahariEiJ_G0030499)	Bmp1 (MGP_PahariEiJ_G0030500)	Sftpc (MGP_PahariEiJ_G0030501)
Rat	MODERN SPECIES	6	Adamdec1 (ENSRNOG00000030724)	Adam28 (ENSRNOG00000014518)	ENSRNOG00000063586	AABR07018269.1 (ENSRNOG00000031720)	ENSRNOG00000063939	ENSRNOG00000067366	Stc1 (ENSRNOG00000015075)	Nkx2-6 (ENSRNOG00000021910)	Nkx3-1 (ENSRNOG00000015477)	Slc25a37 (ENSRNOG00000015495)	Synb (ENSRNOG00000021823)	Entpd4 (ENSRNOG00000016321)	Loxl2 (ENSRNOG00000016758)	R3hcc1 (ENSRNOG00000016777)	Chmp7 (ENSRNOG00000016939)	Tnfrsf10b (ENSRNOG00000038483) ##22	Rhobtb2 (ENSRNOG00000017373)	Pebp4 (ENSRNOG00000026247)	Egr3 (ENSRNOG00000017828)	Bin3 (ENSRNOG00000018023)	Ccar2 (ENSRNOG00000018295)	C15h8orf58 (ENSRNOG00000008351)	Pdlim2 (ENSRNOG00000008543)	Sorbs3 (ENSRNOG00000008829)	Ppp3cc (ENSRNOG00000009745)	Slc39a14 (ENSRNOG00000009832)	Piwil2 (ENSRNOG00000009871)	Polr3d (ENSRNOG00000010028)	Phyhip (ENSRNOG00000010555)	Bmp1 (ENSRNOG00000010890)	Sftpc (ENSRNOG00000011177)
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000154418.a.b	ENSGT00940000161406	ENSGT00900000141143	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000162737	ENSGT00940000160930	ENSGT00940000158607	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860	ENSGT00940000162427.j ##22	ENSGT00940000158918	ENSGT00940000162387	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00530000063672.b	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000157176	ENSGT00390000017162
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b	ENSGT00940000161406	ENSGT00900000141143	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000162737	ENSGT00940000160930	ENSGT00940000158607	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860	ENSGT00940000162427.j ##22	ENSGT00940000158918	ENSGT00940000162387	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00530000063672.b	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000157176	ENSGT00390000017162
Northern American deer mouse	MODERN SPECIES	22	Nefm (ENSPEMG00000020646)	Adam7 (ENSPEMG00000012803)	Adamdec1 (ENSPEMG00000004402)	Adam28 (ENSPEMG00000015520)	ENSPEMG00000030090	ENSPEMG00000027026	Stc1 (ENSPEMG00000027424)	Nkx2-6 (ENSPEMG00000005851)	Nkx3-1 (ENSPEMG00000026785)	Slc25a37 (ENSPEMG00000017275)	Synb (ENSPEMG00000024700)	ENSPEMG00000018234	Loxl2 (ENSPEMG00000016856)	R3hcc1 (ENSPEMG00000007118)	ENSPEMG00000028382	ENSPEMG00000029378 ##22	Rhobtb2 (ENSPEMG00000001035)	Pebp4 (ENSPEMG00000001033)	Egr3 (ENSPEMG00000024575)	Bin3 (ENSPEMG00000015277)	Ccar2 (ENSPEMG00000009116)	9930012K11Rik (ENSPEMG00000016741)	Pdlim2 (ENSPEMG00000011746)	Sorbs3 (ENSPEMG00000019062)	Ppp3cc (ENSPEMG00000015904)	Piwil2 (ENSPEMG00000021798)	Polr3d (ENSPEMG00000023314)	Phyhip (ENSPEMG00000031322)	Bmp1 (ENSPEMG00000022496)	Sftpc (ENSPEMG00000022130)	Lgi3 (ENSPEMG00000021332)