Euteleostomi	ANCESTRAL SPECIES	669															ENSGT00940000158566 #11	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784
Sarcopterygii	ANCESTRAL SPECIES	683																ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784
Tetrapoda	ANCESTRAL SPECIES	42	ENSGT00390000015815	ENSGT00940000159437	ENSGT00390000005498	ENSGT00950000183000.c.a.a	ENSGT00940000161834	ENSGT00940000161779	ENSGT00940000157679	ENSGT00950000182898.a.a.a.a.a	ENSGT00530000064165.a	ENSGT00390000003153	ENSGT00390000003866.b	ENSGT00940000167537	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000007335	ENSGT00390000005232	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253	ENSGT00390000007479	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a	ENSGT00390000001738	ENSGT00390000009753	ENSGT00390000010028	ENSGT01030000234598.b.b	ENSGT00940000160988
Amniota	ANCESTRAL SPECIES	67		ENSGT00940000160034	ENSGT00940000162317	ENSGT00390000015815	ENSGT00940000159437	ENSGT00390000005498	ENSGT00950000183000.c.a.a	ENSGT00940000162773	ENSGT00940000161363	ENSGT00530000064721	ENSGT00940000162343	ENSGT00940000159867	ENSGT00390000011640	ENSGT00390000012424.a	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000162438	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253	ENSGT00390000007479	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a.b	ENSGT00390000001738	ENSGT00390000009753	ENSGT01070000254712	ENSGT00390000010028
Mammalia	ANCESTRAL SPECIES	9	ENSGT00390000006255.b	ENSGT00940000156048.a.a	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00940000166766	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853 #12	ENSGT00940000162660.b.e.b	ENSGT00940000161499 #16	ENSGT00940000157004.a.b #20	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00950000183059.a	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Theria	ANCESTRAL SPECIES	8	ENSGT00390000006255.b.b	ENSGT00940000156048.a.a	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162660.b.e.b	ENSGT00940000161499 #16	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00950000183059.a	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Eutheria	ANCESTRAL SPECIES	3	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162660.b.e.b	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Primates	ANCESTRAL SPECIES		ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Haplorrhini	ANCESTRAL SPECIES		ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Simiiformes	ANCESTRAL SPECIES		ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Rhinopithecus	ANCESTRAL SPECIES	1	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23
Golden snub-nosed monkey	MODERN SPECIES	689	SPINDOC (ENSRROG00000013487) #7	ZFTA (ENSRROG00000004175) #8	RTN3 (ENSRROG00000037363) #9	ENSRROG00000045513 #10	ATL3 (ENSRROG00000036759) #11	PLAAT3 (ENSRROG00000043275) #12	ENSRROG00000003500 #13	PLAAT2 (ENSRROG00000043068) #14	PLAAT4 (ENSRROG00000043528) #15	LGALS12 (ENSRROG00000041051) #16	PLAAT5 (ENSRROG00000020148) #17	SLC22A9 (ENSRROG00000044160) #18	SLC22A8 (ENSRROG00000032433) #19	SLC22A6 (ENSRROG00000028501) #20	ENSRROG00000018171 #21	CHRM1 (ENSRROG00000008830) #22	SLC3A2 (ENSRROG00000038784) #23
Black snub-nosed monkey	MODERN SPECIES	708	SPINDOC (ENSRBIG00000033800) #7	ZFTA (ENSRBIG00000027331) #8	RTN3 (ENSRBIG00000032715) #9	ENSRBIG00000044188 #10	ATL3 (ENSRBIG00000028494) #11	PLAAT3 (ENSRBIG00000032126) #12	ENSRBIG00000029167 ##13	PLAAT2 (ENSRBIG00000042420) #14	PLAAT4 (ENSRBIG00000042937) #15	LGALS12 (ENSRBIG00000034955) #16	PLAAT5 (ENSRBIG00000035439) #17	SLC22A9 (ENSRBIG00000034031) #18	SLC22A8 (ENSRBIG00000040948) #19	SLC22A6 (ENSRBIG00000039106) #20	ENSRBIG00000018377 #21	CHRM1 (ENSRBIG00000027683) #22	SLC3A2 (ENSRBIG00000039661) #23
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Olive baboon	MODERN SPECIES	3	COX8A (ENSPANG00000039572)	NAA40 (ENSPANG00000002369)	RCOR2 (ENSPANG00000007283)	MARK2 (ENSPANG00000026211)	SPINDOC (ENSPANG00000043963) #7	ENSPANG00000045988	RTN3 (ENSPANG00000004686) #9	ATL3 (ENSPANG00000025889) #11	PLAAT3 (ENSPANG00000032107) #12	PLAAT2 (ENSPANG00000005852) #14	PLAAT4 (ENSPANG00000045447) #15	LGALS12 (ENSPANG00000012182) #16	PLAAT5 (ENSPANG00000015204) #17	SLC22A8 (ENSPANG00000017441) #19	SLC22A6 (ENSPANG00000013726) #20	CHRM1 (ENSPANG00000021843) #22	SLC3A2 (ENSPANG00000012315) #23	WDR74 (ENSPANG00000013148)	STX5 (ENSPANG00000019343)	NXF1 (ENSPANG00000012132)	TMEM223 (ENSPANG00000012314)	TMEM179B (ENSPANG00000021117)	TAF6L (ENSPANG00000013647)	POLR2G (ENSPANG00000037490)	ZBTB3 (ENSPANG00000008469)	TTC9C (ENSPANG00000039235)	HNRNPUL2 (ENSPANG00000023745)	GNG3 (ENSPANG00000042558)	BSCL2 (ENSPANG00000011406)	LRRN4CL (ENSPANG00000003479)	UBXN1 (ENSPANG00000005453)
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Drill	MODERN SPECIES	1111	RCOR2 (ENSMLEG00000041544)	MARK2 (ENSMLEG00000042721)	SPINDOC (ENSMLEG00000042638) #7	ZFTA (ENSMLEG00000038685) #8	RTN3 (ENSMLEG00000009760) #9	ENSMLEG00000004674 #10	ATL3 (ENSMLEG00000040413) #11	PLAAT3 (ENSMLEG00000036330) #12	PLAAT2 (ENSMLEG00000034362) #14	PLAAT4 (ENSMLEG00000043996) #15	LGALS12 (ENSMLEG00000041910) #16	PLAAT5 (ENSMLEG00000040885) #17	SLC22A8 (ENSMLEG00000044339) #19	SLC22A6 (ENSMLEG00000031737) #20	ENSMLEG00000022707 #21	CHRM1 (ENSMLEG00000023394) #22	SLC3A2 (ENSMLEG00000042574) #23	WDR74 (ENSMLEG00000032669)	TEX54 (ENSMLEG00000030108)	STX5 (ENSMLEG00000042667)	TMEM223 (ENSMLEG00000029784)	NXF1 (ENSMLEG00000026574)	TMEM179B (ENSMLEG00000039000)	TAF6L (ENSMLEG00000032444)	POLR2G (ENSMLEG00000032928)	ZBTB3 (ENSMLEG00000042521)	TTC9C (ENSMLEG00000036250)	HNRNPUL2 (ENSMLEG00000033906)	GNG3 (ENSMLEG00000039091)	BSCL2 (ENSMLEG00000037535)	LRRN4CL (ENSMLEG00000006668)
Sooty mangabey	MODERN SPECIES	518	NAA40 (ENSCATG00000035111)	RCOR2 (ENSCATG00000033413)	MARK2 (ENSCATG00000030205)	SPINDOC (ENSCATG00000043222) #7	ZFTA (ENSCATG00000038355) #8	RTN3 (ENSCATG00000038469) #9	ATL3 (ENSCATG00000034537) #11	PLAAT3 (ENSCATG00000039316) #12	PLAAT2 (ENSCATG00000043587) #14	PLAAT4 (ENSCATG00000042576) #15	LGALS12 (ENSCATG00000038681) #16	PLAAT5 (ENSCATG00000035197) #17	SLC22A8 (ENSCATG00000034455) #19	SLC22A6 (ENSCATG00000033614) #20	ENSCATG00000005005 #21	CHRM1 (ENSCATG00000004775) #22	SLC3A2 (ENSCATG00000043727) #23	WDR74 (ENSCATG00000035035)	TEX54 (ENSCATG00000044482)	STX5 (ENSCATG00000033087)	NXF1 (ENSCATG00000044025)	TMEM223 (ENSCATG00000034294)	TMEM179B (ENSCATG00000036661)	TAF6L (ENSCATG00000031925)	POLR2G (ENSCATG00000034443)	ZBTB3 (ENSCATG00000034435)	TTC9C (ENSCATG00000035217)	HNRNPUL2 (ENSCATG00000034588)	BSCL2 (ENSCATG00000037983)	GNG3 (ENSCATG00000038843)	LRRN4CL (ENSCATG00000003551)
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00940000163505.a.a.a.b.a.b.b.b.a.a	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00960000190678	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Rhesus	MODERN SPECIES	5	NAA40 (ENSMMUG00000018632)	ENSMMUG00000052569	RCOR2 (ENSMMUG00000014133)	MARK2 (ENSMMUG00000014131)	ENSMMUG00000059969	SPINDOC (ENSMMUG00000018152) #7	ZFTA (ENSMMUG00000047347) #8	RTN3 (ENSMMUG00000015876) #9	ATL3 (ENSMMUG00000005776) #11	PLAAT3 (ENSMMUG00000005775) #14	PLAAT4 (ENSMMUG00000045105) #15	LGALS12 (ENSMMUG00000018304) #16	PLAAT5 (ENSMMUG00000018316) #17	SLC22A8 (ENSMMUG00000016225) #19	SLC22A6 (ENSMMUG00000016227) #20	CHRM1 (ENSMMUG00000017292) #22	SLC3A2 (ENSMMUG00000020354) #23	ENSMMUG00000064232	WDR74 (ENSMMUG00000018779)	STX5 (ENSMMUG00000005280)	NXF1 (ENSMMUG00000000188)	TMEM223 (ENSMMUG00000023094)	TMEM179B (ENSMMUG00000003682)	TAF6L (ENSMMUG00000000110)	POLR2G (ENSMMUG00000014368)	ZBTB3 (ENSMMUG00000056054)	TTC9C (ENSMMUG00000039671)	HNRNPUL2 (ENSMMUG00000051635)	BSCL2 (ENSMMUG00000014363)	GNG3 (ENSMMUG00000042036)	LRRN4CL (ENSMMUG00000031129)
Pig-tailed macaque	MODERN SPECIES	433	RCOR2 (ENSMNEG00000038097)	MARK2 (ENSMNEG00000045327)	SPINDOC (ENSMNEG00000031960) #7	ZFTA (ENSMNEG00000044610) #8	RTN3 (ENSMNEG00000044489) #9	ENSMNEG00000033797 #10	ATL3 (ENSMNEG00000034634) #11	PLAAT3 (ENSMNEG00000039570) #12	PLAAT2 (ENSMNEG00000038914) #14	PLAAT4 (ENSMNEG00000045290) #15	LGALS12 (ENSMNEG00000040245) #16	PLAAT5 (ENSMNEG00000034274) #17	SLC22A8 (ENSMNEG00000038818) #19	SLC22A6 (ENSMNEG00000043253) #20	ENSMNEG00000025380 #21	CHRM1 (ENSMNEG00000010440) #22	SLC3A2 (ENSMNEG00000044452) #23	TEX54 (ENSMNEG00000032932)	WDR74 (ENSMNEG00000042608)	STX5 (ENSMNEG00000041981)	NXF1 (ENSMNEG00000034667)	TMEM223 (ENSMNEG00000030390)	TMEM179B (ENSMNEG00000000022)	TAF6L (ENSMNEG00000031769)	POLR2G (ENSMNEG00000041523)	ZBTB3 (ENSMNEG00000032222)	TTC9C (ENSMNEG00000038138)	HNRNPUL2 (ENSMNEG00000036955)	GNG3 (ENSMNEG00000041074)	BSCL2 (ENSMNEG00000027955)	LRRN4CL (ENSMNEG00000008801)
Vervet Monkey	MODERN SPECIES		COX8A (ENSCSAG00000006887)	NAA40 (ENSCSAG00000006886)	RCOR2 (ENSCSAG00000006881)	MARK2 (ENSCSAG00000006877)	SPINDOC (ENSCSAG00000006870) #7	ZFTA (ENSCSAG00000006866) #8	ENSCSAG00000006861 #9	ATL3 (ENSCSAG00000006859) #11	PLAAT3 (ENSCSAG00000006852) #12	PLAAT2 (ENSCSAG00000006843) #14	PLAAT4 (ENSCSAG00000006839) #15	LGALS12 (ENSCSAG00000006834) #16	PLAAT5 (ENSCSAG00000006826) #17	SLC22A8 (ENSCSAG00000006811) #19	SLC22A6 (ENSCSAG00000006803) #20	CHRM1 (ENSCSAG00000019175) #22	SLC3A2 (ENSCSAG00000006769) #23	WDR74 (ENSCSAG00000006751)	STX5 (ENSCSAG00000006748)	NXF1 (ENSCSAG00000006739)	TMEM223 (ENSCSAG00000006730)	TMEM179B (ENSCSAG00000006726)	TAF6L (ENSCSAG00000006720)	POLR2G (ENSCSAG00000006715)	ZBTB3 (ENSCSAG00000006712)	TTC9C (ENSCSAG00000006708)	HNRNPUL2 (ENSCSAG00000006701)	GNG3 (ENSCSAG00000006696)	BSCL2 (ENSCSAG00000006684)	LRRN4CL (ENSCSAG00000019176)	UBXN1 (ENSCSAG00000006659)
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000157482.d #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000157482.d.a #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Gorilla	MODERN SPECIES	2	ENSGGOG00000037187 #10	ATL3 (ENSGGOG00000009860) #11	PLAAT3 (ENSGGOG00000001944) #12	PLAAT2 (ENSGGOG00000000282) #14	PLAAT4 (ENSGGOG00000000281) #15	LGALS12 (ENSGGOG00000000279) #16	PLAAT5 (ENSGGOG00000000970) #17	SLC22A9 (ENSGGOG00000003608) #18	SLC22A10 (ENSGGOG00000014919)	CSNK1G2 (ENSGGOG00000007714)	SLC22A25 (ENSGGOG00000007793)	SLC22A24 (ENSGGOG00000005570)	SLC22A8 (ENSGGOG00000003920) #19	SLC22A6 (ENSGGOG00000003915) #20	ENSGGOG00000036955 #21	CHRM1 (ENSGGOG00000016344) #22	SLC3A2 (ENSGGOG00000011233) #23	WDR74 (ENSGGOG00000001923)	TEX54 (ENSGGOG00000037357)	STX5 (ENSGGOG00000001919)	ENSGGOG00000040653	NXF1 (ENSGGOG00000001911)	TMEM223 (ENSGGOG00000001910)	TMEM179B (ENSGGOG00000001907)	TAF6L (ENSGGOG00000011807)	POLR2G (ENSGGOG00000011739)	ZBTB3 (ENSGGOG00000011735)	TTC9C (ENSGGOG00000011733)	HNRNPUL2 (ENSGGOG00000011722)	GNG3 (ENSGGOG00000003199)	BSCL2 (ENSGGOG00000003195)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00550000075025.`b.b.b #10	ENSGT00940000157482.d.b #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Human	MODERN SPECIES	2	SPINDOC (ENSG00000168005) #7	ZFTA (ENSG00000188070) #8	RTN3 (ENSG00000133318) #9	ATL3 (ENSG00000184743) #11	PLAAT3 (ENSG00000176485) #12	PLAAT2 (ENSG00000133328) #14	PLAAT4 (ENSG00000133321) #15	LGALS12 (ENSG00000133317) #16	PLAAT5 (ENSG00000168004) #17	SLC22A9 (ENSG00000149742) #18	SLC22A10 (ENSG00000184999)	SLC22A25 (ENSG00000196600)	SLC22A24 (ENSG00000197658)	SLC22A8 (ENSG00000149452) #19	SLC22A6 (ENSG00000197901) #20	CHRM1 (ENSG00000168539) #22	SLC3A2 (ENSG00000168003) #23	WDR74 (ENSG00000133316)	TEX54 (ENSG00000283268)	STX5 (ENSG00000162236)	NXF1 (ENSG00000162231)	TMEM179B (ENSG00000185475)	TMEM223 (ENSG00000168569)	TAF6L (ENSG00000162227)	POLR2G (ENSG00000168002)	ZBTB3 (ENSG00000185670)	TTC9C (ENSG00000162222)	HNRNPUL2 (ENSG00000214753)	GNG3 (ENSG00000162188)	BSCL2 (ENSG00000168000)	LRRN4CL (ENSG00000177363)
Pan	ANCESTRAL SPECIES	1	ENSGT00940000157482.d.a #9	ENSGT00550000075025.`b.b.b #10	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Bonobo	MODERN SPECIES	2	ENSPPAG00000043354 #10	ATL3 (ENSPPAG00000000239) #11	PLAAT3 (ENSPPAG00000038739) #12	PLAAT2 (ENSPPAG00000034354) #14	PLAAT4 (ENSPPAG00000033745) #15	LGALS12 (ENSPPAG00000042349) #16	PLAAT5 (ENSPPAG00000040450) #17	SLC22A9 (ENSPPAG00000029821) #18	SLC22A10 (ENSPPAG00000040455)	SLC22A25 (ENSPPAG00000039130)	ENSPPAG00000042818	SLC22A24 (ENSPPAG00000035098)	SLC22A8 (ENSPPAG00000041453) #19	SLC22A6 (ENSPPAG00000035836) #20	ENSPPAG00000024710 #21	CHRM1 (ENSPPAG00000018668) #22	SLC3A2 (ENSPPAG00000020658) #23	WDR74 (ENSPPAG00000036028)	TEX54 (ENSPPAG00000012450)	STX5 (ENSPPAG00000039956)	NXF1 (ENSPPAG00000041498)	TMEM179B (ENSPPAG00000038907)	TMEM223 (ENSPPAG00000035801)	TAF6L (ENSPPAG00000009707)	POLR2G (ENSPPAG00000039868)	ZBTB3 (ENSPPAG00000031673)	TTC9C (ENSPPAG00000030010)	ENSPPAG00000041471	GNG3 (ENSPPAG00000032105)	BSCL2 (ENSPPAG00000042902)	UBXN1 (ENSPPAG00000036691)
Chimpanzee	MODERN SPECIES	2	RTN3 (ENSPTRG00000003809) #9	ENSPTRG00000043962 #10	ATL3 (ENSPTRG00000003807) #11	PLAAT3 (ENSPTRG00000003806) #12	PLAAT2 (ENSPTRG00000003805) #14	PLAAT4 (ENSPTRG00000003804) #15	LGALS12 (ENSPTRG00000003803) #16	PLAAT5 (ENSPTRG00000003801) #17	SLC22A9 (ENSPTRG00000003800) #18	SLC22A10 (ENSPTRG00000003799)	SLC22A25 (ENSPTRG00000024251)	SLC22A24 (ENSPTRG00000003797)	SLC22A8 (ENSPTRG00000003796) #19	SLC22A6 (ENSPTRG00000023694) #20	ENSPTRG00000046841 #21	CHRM1 (ENSPTRG00000003795) #22	SLC3A2 (ENSPTRG00000003794) #23	WDR74 (ENSPTRG00000047249)	STX5 (ENSPTRG00000003792)	ENSPTRG00000051335	NXF1 (ENSPTRG00000003791)	TMEM223 (ENSPTRG00000003790)	TMEM179B (ENSPTRG00000003789)	TAF6L (ENSPTRG00000003787)	ENSPTRG00000050327	ZBTB3 (ENSPTRG00000003785)	TTC9C (ENSPTRG00000023824)	HNRNPUL2 (ENSPTRG00000034359)	GNG3 (ENSPTRG00000003783)	BSCL2 (ENSPTRG00000003784)	UBXN1 (ENSPTRG00000003780)
Orangutan	MODERN SPECIES	2	SPINDOC (ENSPPYG00000003126) #7	ZFTA (ENSPPYG00000003127) #8	RTN3 (ENSPPYG00000003128) #9	ATL3 (ENSPPYG00000003129) #11	PLAAT3 (ENSPPYG00000031710) #12	PLAAT2 (ENSPPYG00000003130) #14	ENSPPYG00000003131 #15	LGALS12 (ENSPPYG00000003132) #16	PLAAT5 (ENSPPYG00000003133) #17	SLC22A9 (ENSPPYG00000003134) #18	SLC22A10 (ENSPPYG00000038210)	SLC22A25 (ENSPPYG00000003135)	SLC22A24 (ENSPPYG00000003136)	SLC22A8 (ENSPPYG00000003137) #19	SLC22A6 (ENSPPYG00000003138) #20	CHRM1 (ENSPPYG00000003139) #22	SLC3A2 (ENSPPYG00000003140) #23	WDR74 (ENSPPYG00000003141)	TEX54 (ENSPPYG00000034365)	STX5 (ENSPPYG00000003142)	NXF1 (ENSPPYG00000003143)	TMEM223 (ENSPPYG00000003144)	TMEM179B (ENSPPYG00000003145)	TAF6L (ENSPPYG00000003146)	ENSPPYG00000003147	ZBTB3 (ENSPPYG00000003148)	TTC9C (ENSPPYG00000030629)	HNRNPUL2 (ENSPPYG00000029773)	GNG3 (ENSPPYG00000003150)	BSCL2 (ENSPPYG00000038932)	LRRN4CL (ENSPPYG00000003152)
Gibbon	MODERN SPECIES	19	ZFTA (ENSNLEG00000004648) #8	RTN3 (ENSNLEG00000004594) #9	ENSNLEG00000030866 #10	ENSNLEG00000004565 #11	PLAAT3 (ENSNLEG00000004552) #12	PLAAT2 (ENSNLEG00000004549) #14	ENSNLEG00000035013 #15	LGALS12 (ENSNLEG00000004499) #16	PLAAT5 (ENSNLEG00000004486) #17	SLC22A10 (ENSNLEG00000004483)	SLC22A25 (ENSNLEG00000004474)	SLC22A24 (ENSNLEG00000034554)	SLC22A8 (ENSNLEG00000004442) #19	SLC22A6 (ENSNLEG00000004394) #20	ENSNLEG00000035187 #21	CHRM1 (ENSNLEG00000035083) #22	SLC3A2 (ENSNLEG00000004298) #23	WDR74 (ENSNLEG00000004238)	STX5 (ENSNLEG00000004184)	ENSNLEG00000035784	ENSNLEG00000004123	TMEM223 (ENSNLEG00000004119)	TMEM179B (ENSNLEG00000036102)	TAF6L (ENSNLEG00000032645)	ENSNLEG00000004097	ZBTB3 (ENSNLEG00000031633)	ENSNLEG00000034047	HNRNPUL2 (ENSNLEG00000004077)	GNG3 (ENSNLEG00000004072)	BSCL2 (ENSNLEG00000004058)	LRRN4CL (ENSNLEG00000004054)
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Cebidae	ANCESTRAL SPECIES		ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646.e.a #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975.i.b	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Marmoset	MODERN SPECIES	2	SPINDOC (ENSCJAG00000018418) #7	ZFTA (ENSCJAG00000047167) #8	RTN3 (ENSCJAG00000018422) #9	ATL3 (ENSCJAG00000018444) #11	ENSCJAG00000033686	PLAAT3 (ENSCJAG00000018470) #12	PLAAT2 (ENSCJAG00000018481) #14	PLAAT4 (ENSCJAG00000018491) #15	LGALS12 (ENSCJAG00000018504) #16	PLAAT5 (ENSCJAG00000038446) #17	SLC22A10 (ENSCJAG00000018512)	ENSCJAG00000043818	SLC22A8 (ENSCJAG00000046805) #19	SLC22A6 (ENSCJAG00000018534) #20	ENSCJAG00000080197	CHRM1 (ENSCJAG00000018561) #22	ENSCJAG00000018569 #23	ENSCJAG00000018581	TEX54 (ENSCJAG00000047769)	STX5 (ENSCJAG00000018606)	NXF1 (ENSCJAG00000018635)	TMEM223 (ENSCJAG00000018681)	TMEM179B (ENSCJAG00000018683)	TAF6L (ENSCJAG00000040347)	ENSCJAG00000018688	ZBTB3 (ENSCJAG00000018693)	TTC9C (ENSCJAG00000018703)	HNRNPUL2 (ENSCJAG00000018709)	GNG3 (ENSCJAG00000069907)	BSCL2 (ENSCJAG00000018730)	LRRN4CL (ENSCJAG00000047970)
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000167143	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646.e.a #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00910000147729	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975.i.a	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000156457
Capuchin	MODERN SPECIES	316													SLC22A8 (ENSCCAG00000037209) #19	SLC22A6 (ENSCCAG00000029767) #20	ENSCCAG00000018405 #21	CHRM1 (ENSCCAG00000006069) #22	SLC3A2 (ENSCCAG00000028057) #23	WDR74 (ENSCCAG00000020060)	STX5 (ENSCCAG00000013514)	NXF1 (ENSCCAG00000030567)	TMEM223 (ENSCCAG00000009078)	TMEM179B (ENSCCAG00000028319)	TAF6L (ENSCCAG00000036664)	ENSCCAG00000027746	ZBTB3 (ENSCCAG00000021977)	ENSCCAG00000022329	HNRNPUL2 (ENSCCAG00000037674)	BSCL2 (ENSCCAG00000026340)	GNG3 (ENSCCAG00000030017)	UBXN1 (ENSCCAG00000020847)	UQCC3 (ENSCCAG00000030092)
Bolivian squirrel monkey	MODERN SPECIES	42	IL3RA (ENSSBOG00000019496)	CSF2RA (ENSSBOG00000015957)	RTN3 (ENSSBOG00000033351) #9	ATL3 (ENSSBOG00000000876) #11	PLAAT3 (ENSSBOG00000018544) #12	PLAAT2 (ENSSBOG00000004535) #14	PLAAT4 (ENSSBOG00000022541) #15	LGALS12 (ENSSBOG00000022059) #16	PLAAT5 (ENSSBOG00000018115) #17	SLC22A9 (ENSSBOG00000030304) #18	SLC22A10 (ENSSBOG00000019055)	SLC22A25 (ENSSBOG00000026216)	SLC22A8 (ENSSBOG00000018591) #19	SLC22A6 (ENSSBOG00000016011) #20	ENSSBOG00000018203 #21	CHRM1 (ENSSBOG00000021747) #22	SLC3A2 (ENSSBOG00000019428) #23	WDR74 (ENSSBOG00000030887)	STX5 (ENSSBOG00000018874)	ENSSBOG00000029029	NXF1 (ENSSBOG00000019587)	TMEM223 (ENSSBOG00000034790)	TMEM179B (ENSSBOG00000030503)	TAF6L (ENSSBOG00000030560)	POLR2G (ENSSBOG00000015220)	ZBTB3 (ENSSBOG00000032000)	TTC9C (ENSSBOG00000023530)	HNRNPUL2 (ENSSBOG00000026780)	GNG3 (ENSSBOG00000015839)	BSCL2 (ENSSBOG00000017621)	ENSSBOG00000035227
Mas night monkey	MODERN SPECIES	336													SLC22A8 (ENSANAG00000023797) #19	SLC22A6 (ENSANAG00000033554) #20	ENSANAG00000020205 #21	CHRM1 (ENSANAG00000020194) #22	SLC3A2 (ENSANAG00000037370) #23	WDR74 (ENSANAG00000031747)	STX5 (ENSANAG00000028924)	NXF1 (ENSANAG00000024600)	TMEM223 (ENSANAG00000037673)	TMEM179B (ENSANAG00000036828)	TAF6L (ENSANAG00000037691)	POLR2G (ENSANAG00000037428)	ZBTB3 (ENSANAG00000026704)	TTC9C (ENSANAG00000030687)	HNRNPUL2 (ENSANAG00000027153)	GNG3 (ENSANAG00000028934)	ENSANAG00000037042	UBXN1 (ENSANAG00000027543)	UQCC3 (ENSANAG00000035176)
Tarsier	MODERN SPECIES	3315															ENSTSYG00000026072 #21	CHRM1 (ENSTSYG00000011373) #22	SLC3A2 (ENSTSYG00000028956) #23	WDR74 (ENSTSYG00000032066)	STX5 (ENSTSYG00000010903)	NXF1 (ENSTSYG00000027468)	TMEM223 (ENSTSYG00000032236)	TMEM179B (ENSTSYG00000031386)	TAF6L (ENSTSYG00000034864)	POLR2G (ENSTSYG00000011918)	ZBTB3 (ENSTSYG00000031557)	TTC9C (ENSTSYG00000035368)	HNRNPUL2 (ENSTSYG00000003551)	GNG3 (ENSTSYG00000028232)	BSCL2 (ENSTSYG00000025677)	UBXN1 (ENSTSYG00000004434)	UQCC3 (ENSTSYG00000006832)
Strepsirrhini	ANCESTRAL SPECIES	20	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00940000162317	ENSGT00940000160034	ENSGT00390000011640	ENSGT00390000012424.a	ENSGT00390000008351	ENSGT00390000007071	ENSGT00390000011180	ENSGT00390000018613.b.s.a	ENSGT00940000161375.b	ENSGT00940000162437	ENSGT00940000162436 #17	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00940000162317	ENSGT00940000160034	ENSGT00390000011640	ENSGT00390000012424.a	ENSGT00390000008351	ENSGT00390000007071	ENSGT00390000011180	ENSGT00390000018613.b.s.a	ENSGT00940000161375.b	ENSGT00940000162437	ENSGT00940000162436 #17	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Greater bamboo lemur	MODERN SPECIES	101											PLAAT5 (ENSPSMG00000023332) #17	SLC22A24 (ENSPSMG00000023328)	SLC22A8 (ENSPSMG00000023317) #19	SLC22A6 (ENSPSMG00000023289) #20	ENSPSMG00000023261 #21	CHRM1 (ENSPSMG00000023259) #22	SLC3A2 (ENSPSMG00000023235) #23	WDR74 (ENSPSMG00000023161)	STX5 (ENSPSMG00000023098)	NXF1 (ENSPSMG00000023076)	TMEM223 (ENSPSMG00000023035)	TMEM179B (ENSPSMG00000023026)	TAF6L (ENSPSMG00000023017)	POLR2G (ENSPSMG00000023003)	ZBTB3 (ENSPSMG00000022991)	ENSPSMG00000022990	HNRNPUL2 (ENSPSMG00000022973)	GNG3 (ENSPSMG00000022948)	BSCL2 (ENSPSMG00000022881)	LRRN4CL (ENSPSMG00000022803)	UBXN1 (ENSPSMG00000022794)
Coquerels sifaka	MODERN SPECIES	124	FIBP (ENSPCOG00000018954)	CCDC85B (ENSPCOG00000002873)	FOSL1 (ENSPCOG00000027454)	C11orf68 (ENSPCOG00000003847)	DRAP1 (ENSPCOG00000018977)	TSGA10IP (ENSPCOG00000016636)	SART1 (ENSPCOG00000008448)	EIF1AD (ENSPCOG00000026199)	BANF1 (ENSPCOG00000017573)	CST6 (ENSPCOG00000014875)	CATSPER1 (ENSPCOG00000017509)	PLAAT5 (ENSPCOG00000014222) #17	SLC22A24 (ENSPCOG00000014735)	SLC22A8 (ENSPCOG00000024141) #19	SLC22A6 (ENSPCOG00000017938) #20	CHRM1 (ENSPCOG00000013215) #22	SLC3A2 (ENSPCOG00000028096) #23	WDR74 (ENSPCOG00000024846)	TEX54 (ENSPCOG00000020742)	STX5 (ENSPCOG00000024733)	NXF1 (ENSPCOG00000024446)	TMEM223 (ENSPCOG00000028275)	TMEM179B (ENSPCOG00000023933)	TAF6L (ENSPCOG00000017276)	POLR2G (ENSPCOG00000024131)	ZBTB3 (ENSPCOG00000020656)	TTC9C (ENSPCOG00000017839)	HNRNPUL2 (ENSPCOG00000013502)	GNG3 (ENSPCOG00000017973)	BSCL2 (ENSPCOG00000015043)	UBXN1 (ENSPCOG00000019984)
Mouse lemur	MODERN SPECIES	27	CCDC85B (ENSMICG00000006912)	FOSL1 (ENSMICG00000012846)	C11orf68 (ENSMICG00000012852)	DRAP1 (ENSMICG00000032164)	TSGA10IP (ENSMICG00000038933)	SART1 (ENSMICG00000030096)	EIF1AD (ENSMICG00000038645)	BANF1 (ENSMICG00000037787)	CST6 (ENSMICG00000017209)	CATSPER1 (ENSMICG00000017211)	ENSMICG00000035999	PLAAT5 (ENSMICG00000004239) #17	SLC22A24 (ENSMICG00000034911)	SLC22A8 (ENSMICG00000006419) #19	SLC22A6 (ENSMICG00000026456) #20	CHRM1 (ENSMICG00000047391) #22	SLC3A2 (ENSMICG00000017390) #23	WDR74 (ENSMICG00000017388)	TEX54 (ENSMICG00000046387)	STX5 (ENSMICG00000017386)	NXF1 (ENSMICG00000000980)	TMEM223 (ENSMICG00000046109)	TMEM179B (ENSMICG00000000976)	TAF6L (ENSMICG00000036223)	POLR2G (ENSMICG00000009967)	ZBTB3 (ENSMICG00000009961)	TTC9C (ENSMICG00000042013)	HNRNPUL2 (ENSMICG00000009943)	GNG3 (ENSMICG00000028299)	ENSMICG00000033250	UBXN1 (ENSMICG00000009925)
Bushbaby	MODERN SPECIES	255	SART1 (ENSOGAG00000016523)	EIF1AD (ENSOGAG00000016528)	BANF1 (ENSOGAG00000016530)	CST6 (ENSOGAG00000016534)	CATSPER1 (ENSOGAG00000016536)	LGALS12 (ENSOGAG00000009408) #16	ENSOGAG00000027568	PLAAT5 (ENSOGAG00000004581) #17	ENSOGAG00000003053	ENSOGAG00000029377	ENSOGAG00000003051	ENSOGAG00000030634	ENSOGAG00000006579	SLC22A8 (ENSOGAG00000003588) #19	SLC22A6 (ENSOGAG00000003585) #20	CHRM1 (ENSOGAG00000028685) #22	SLC3A2 (ENSOGAG00000027003) #23	WDR74 (ENSOGAG00000015303)	STX5 (ENSOGAG00000015298)	NXF1 (ENSOGAG00000008901)	TMEM223 (ENSOGAG00000024913)	TMEM179B (ENSOGAG00000008897)	TAF6L (ENSOGAG00000008893)	POLR2G (ENSOGAG00000032720)	ZBTB3 (ENSOGAG00000011414)	TTC9C (ENSOGAG00000003305)	HNRNPUL2 (ENSOGAG00000003302)	GNG3 (ENSOGAG00000034224)	BSCL2 (ENSOGAG00000025056)	LRRN4CL (ENSOGAG00000031003)	UBXN1 (ENSOGAG00000011411)
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Glires	ANCESTRAL SPECIES	1	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000164763	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Sciuridae	ANCESTRAL SPECIES	40									ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000164763	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Marmotini	ANCESTRAL SPECIES	6	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c.d.b.b #14	ENSGT00940000154853.c.c.a #14	ENSGT00940000162878 #15	ENSGT00940000154853.c.d.b.a.a #14	ENSGT00940000162436 #17	ENSGT00940000164763.e	ENSGT00940000164763.f	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Marmotini_b	ANCESTRAL SPECIES	21														ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Arctic ground squirrel	MODERN SPECIES	366														SLC22A8 (ENSUPAG00010005520) #19	SLC22A6 (ENSUPAG00010005504) #20	CHRM1 (ENSUPAG00010005493) #22	SLC3A2 (ENSUPAG00010005472) #23	WDR74 (ENSUPAG00010005413)	ENSUPAG00010005405	NXF1 (ENSUPAG00010005335)	TMEM223 (ENSUPAG00010005332)	TMEM179B (ENSUPAG00010005330)	TAF6L (ENSUPAG00010005260)	ENSUPAG00010005242	ZBTB3 (ENSUPAG00010005239)	TTC9C (ENSUPAG00010005227)	HNRNPUL2 (ENSUPAG00010005211)	GNG3 (ENSUPAG00010005209)	BSCL2 (ENSUPAG00010005172)	LRRN4CL (ENSUPAG00010005167)	UBXN1 (ENSUPAG00010005156)
Squirrel	MODERN SPECIES	181														SLC22A8 (ENSSTOG00000007893) #19	SLC22A6 (ENSSTOG00000007863) #20	CHRM1 (ENSSTOG00000004514) #22	ENSSTOG00000004495 #23	WDR74 (ENSSTOG00000028814)	ENSSTOG00000031064	STX5 (ENSSTOG00000004487)	NXF1 (ENSSTOG00000004463)	TMEM179B (ENSSTOG00000004436)	TMEM223 (ENSSTOG00000004451)	TAF6L (ENSSTOG00000004406)	POLR2G (ENSSTOG00000004391)	ZBTB3 (ENSSTOG00000027839)	TTC9C (ENSSTOG00000004352)	HNRNPUL2 (ENSSTOG00000004327)	GNG3 (ENSSTOG00000001052)	BSCL2 (ENSSTOG00000024362)	LRRN4CL (ENSSTOG00000022001)
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000006639 #14	PLAAT5 (ENSMMMG00000006630) #17	ENSMMMG00000005778	ENSMMMG00000005768 #18	ENSMMMG00000004981	ENSMMMG00000004930 #18	ENSMMMG00000004924	ENSMMMG00000004907 #18	ENSMMMG00000004851 #18	ENSMMMG00000003825	ENSMMMG00000003776	ENSMMMG00000003769 #18	SLC22A8 (ENSMMMG00000003731) #19	SLC22A6 (ENSMMMG00000003706) #20	ENSMMMG00000003700 #21	CHRM1 (ENSMMMG00000003694) #22	SLC3A2 (ENSMMMG00000003678) #23	WDR74 (ENSMMMG00000003523)	STX5 (ENSMMMG00000003474)	NXF1 (ENSMMMG00000003452)	TMEM223 (ENSMMMG00000003447)	TMEM179B (ENSMMMG00000003438)	TAF6L (ENSMMMG00000003387)	POLR2G (ENSMMMG00000003372)	ZBTB3 (ENSMMMG00000003369)	TTC9C (ENSMMMG00000003362)	HNRNPUL2 (ENSMMMG00000002784)	GNG3 (ENSMMMG00000002755)	BSCL2 (ENSMMMG00000002687)	LRRN4CL (ENSMMMG00000002684)	UBXN1 (ENSMMMG00000002665)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005023641 #18	ENSSVLG00005023714	ENSSVLG00005023731	ENSSVLG00005023766 #18	ENSSVLG00005023808	ENSSVLG00005023863 #18	ENSSVLG00005024051 #18	ENSSVLG00005024076	ENSSVLG00005024264 #18	SLC22A24 (ENSSVLG00005024838)	ENSSVLG00005024877	ENSSVLG00005024903	SLC22A8 (ENSSVLG00005024944) #19	SLC22A6 (ENSSVLG00005024995) #20	ENSSVLG00005025007	CHRM1 (ENSSVLG00005025022) #22	SLC3A2 (ENSSVLG00005025047) #23	WDR74 (ENSSVLG00005004863)	STX5 (ENSSVLG00005004935)	NXF1 (ENSSVLG00005004975)	TMEM223 (ENSSVLG00005005000)	TMEM179B (ENSSVLG00005005020)	TAF6L (ENSSVLG00005005050)	POLR2G (ENSSVLG00005005070)	ZBTB3 (ENSSVLG00005005114)	TTC9C (ENSSVLG00005005141)	HNRNPUL2 (ENSSVLG00005005186)	BSCL2 (ENSSVLG00005005272)	GNG3 (ENSSVLG00005005306)	LRRN4CL (ENSSVLG00005005319)	UBXN1 (ENSSVLG00005005341)
Hystricomorpha	ANCESTRAL SPECIES	37												ENSGT00940000162436 #17	ENSGT00940000161499 #16	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Hystricomorpha_a	ANCESTRAL SPECIES	44													ENSGT00940000161499 #16	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000001930
Hystricomorpha_b	ANCESTRAL SPECIES	80													ENSGT00940000161499 #16	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000001930
Long-tailed chinchilla	MODERN SPECIES	306													LGALS12 (ENSCLAG00000000294) #16	SLC22A8 (ENSCLAG00000000390) #19	SLC22A6 (ENSCLAG00000001057) #20	CHRM1 (ENSCLAG00000000446) #22	SLC3A2 (ENSCLAG00000000468) #23	WDR74 (ENSCLAG00000000627)	STX5 (ENSCLAG00000000665)	NXF1 (ENSCLAG00000001490)	TMEM223 (ENSCLAG00000000343)	TMEM179B (ENSCLAG00000000362)	TAF6L (ENSCLAG00000000112)	POLR2G (ENSCLAG00000000802)	ZBTB3 (ENSCLAG00000000861)	TTC9C (ENSCLAG00000000902)	HNRNPUL2 (ENSCLAG00000000417)	LRRN4CL (ENSCLAG00000000228)	GNG3 (ENSCLAG00000000268)	BSCL2 (ENSCLAG00000000105)	UQCC3 (ENSCLAG00000000136)
Degu	MODERN SPECIES	320											ENSODEG00000002375	ENSODEG00000002413	LGALS12 (ENSODEG00000002489) #16	SLC22A8 (ENSODEG00000002518) #19	SLC22A6 (ENSODEG00000002780) #20	CHRM1 (ENSODEG00000018978) #22	SLC3A2 (ENSODEG00000003055) #23	WDR74 (ENSODEG00000003132)	STX5 (ENSODEG00000003162)	NXF1 (ENSODEG00000001620)	TMEM223 (ENSODEG00000001739)	TAF6L (ENSODEG00000001781)	ENSODEG00000018748	ENSODEG00000002048	HNRNPUL2 (ENSODEG00000002142)	TTC9C (ENSODEG00000002308)	GNG3 (ENSODEG00000002315)	UBXN1 (ENSODEG00000002987)	UQCC3 (ENSODEG00000003020)	INTS5 (ENSODEG00000003038)	GANAB (ENSODEG00000003210)
Guinea pig	MODERN SPECIES	44	ENSCPOG00000035220	ENSCPOG00000034087	ENSCPOG00000038081	ENSCPOG00000040732	ENSCPOG00000030540	ENSCPOG00000024812	OR5AS1 (ENSCPOG00000002762)	ENSCPOG00000035549	ENSCPOG00000024576	ENSCPOG00000003501	ENSCPOG00000031316	ENSCPOG00000021873	LGALS12 (ENSCPOG00000001729) #16	SLC22A8 (ENSCPOG00000007880) #19	SLC22A6 (ENSCPOG00000015195) #20	CHRM1 (ENSCPOG00000000307) #22	SLC3A2 (ENSCPOG00000013152) #23	WDR74 (ENSCPOG00000008305)	STX5 (ENSCPOG00000030304)	NXF1 (ENSCPOG00000006126)	TMEM223 (ENSCPOG00000006124)	TMEM179B (ENSCPOG00000006121)	TAF6L (ENSCPOG00000002702)	POLR2G (ENSCPOG00000036420)	ZBTB3 (ENSCPOG00000011665)	TTC9C (ENSCPOG00000031200)	ENSCPOG00000000739	GNG3 (ENSCPOG00000040497)	LRRN4CL (ENSCPOG00000036188)	BSCL2 (ENSCPOG00000021949)	UBXN1 (ENSCPOG00000004750)
Naked mole-rat female	MODERN SPECIES	14	PSMC3 (ENSHGLG00000005713)	RAPSN (ENSHGLG00000008521)	ENSHGLG00000006909	ENSHGLG00000037048	KBTBD4 (ENSHGLG00000047234)	NDUFS3 (ENSHGLG00000018368)	FAM180B (ENSHGLG00000038229)	MTCH2 (ENSHGLG00000017536)	ENSHGLG00000043784	ENSHGLG00000008506	ENSHGLG00000039374	ENSHGLG00000041936 #17	ENSHGLG00000003580 #16	ENSHGLG00000003320 #19	SLC22A6 (ENSHGLG00000003133) #20	CHRM1 (ENSHGLG00000040030) #22	SLC3A2 (ENSHGLG00000004557) #23	WDR74 (ENSHGLG00000003751)	STX5 (ENSHGLG00000003553)	NXF1 (ENSHGLG00000002936)	TMEM223 (ENSHGLG00000034690)	TAF6L (ENSHGLG00000005590)	POLR2G (ENSHGLG00000004851)	ZBTB3 (ENSHGLG00000032180)	ENSHGLG00000038212	HNRNPUL2 (ENSHGLG00000003285)	GNG3 (ENSHGLG00000038630)	BSCL2 (ENSHGLG00000002887)	ENSHGLG00000038756	UBXN1 (ENSHGLG00000002960)	METTL12 (ENSHGLG00000044833)
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Kangaroo rat	MODERN SPECIES	436														Slc22a8 (ENSDORG00000014299) #19	Slc22a6 (ENSDORG00000008272) #20	Chrm1 (ENSDORG00000014333) #22	ENSDORG00000010523 #23	ENSDORG00000023609 #23	Wdr74 (ENSDORG00000030180)	ENSDORG00000026362	ENSDORG00000025630	Nxf1 (ENSDORG00000015692)	Tmem223 (ENSDORG00000015693)	ENSDORG00000029410	ENSDORG00000015695	ENSDORG00000015696	Zbtb3 (ENSDORG00000015697)	Ttc9c (ENSDORG00000028105)	Hnrnpul2 (ENSDORG00000008678)	Gng3 (ENSDORG00000025670)	ENSDORG00000024721
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Muroidea	ANCESTRAL SPECIES	2	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c #18	ENSGT00940000161239.d #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c.b #18	ENSGT00940000161239.c.a.a #18	ENSGT00940000161239.d #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c.b #18	ENSGT00940000161239.d #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c.b #18	ENSGT00940000161239.d #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646.j #23	ENSGT00940000156646.i #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Chinese hamster chok1gshd	MODERN SPECIES	401	ENSCGRG00001004057	Rcor2 (ENSCGRG00001008621)	Mark2 (ENSCGRG00001010551)	Spindoc (ENSCGRG00001001090) #7	Zfta (ENSCGRG00001004358) #8	Rtn3 (ENSCGRG00001018871) #9	Atl3 (ENSCGRG00001018013) #11	Plaat3 (ENSCGRG00001007573) #12	Lgals12 (ENSCGRG00001010564) #16	Plaat5 (ENSCGRG00001019087) #17	Slc22a19 (ENSCGRG00001022436) #18	ENSCGRG00001021584	ENSCGRG00001003608 #18	Slc22a8 (ENSCGRG00001007311) #19	Slc22a6 (ENSCGRG00001015989) #20	Chrm1 (ENSCGRG00001002011) #22	Slc3a2 (ENSCGRG00001025072) #23	Wdr74 (ENSCGRG00001004246)	Tex54 (ENSCGRG00001012530)	Stx5a (ENSCGRG00001018343)	Nxf1 (ENSCGRG00001013721)	Tmem223 (ENSCGRG00001023350)	Tmem179b (ENSCGRG00001025014)	Taf6l (ENSCGRG00001007467)	ENSCGRG00001022692	Zbtb3 (ENSCGRG00001006797)	Ttc9c (ENSCGRG00001011015)	Hnrnpul2 (ENSCGRG00001017076)	Gng3 (ENSCGRG00001014012)	Bscl2 (ENSCGRG00001015829)	Lrrn4cl (ENSCGRG00001009869)
Golden Hamster	MODERN SPECIES	617	Rcor2 (ENSMAUG00000013529)	ENSMAUG00000013126	ENSMAUG00000015638	ENSMAUG00000014179	Spindoc (ENSMAUG00000013145) #7	Zfta (ENSMAUG00000013334) #8	ENSMAUG00000013612 #9	Atl3 (ENSMAUG00000014736) #11	Plaat3 (ENSMAUG00000013633) #12	Lgals12 (ENSMAUG00000014489) #16	Plaat5 (ENSMAUG00000013292) #17	Slc22a19 (ENSMAUG00000013315) #18	ENSMAUG00000013367 #18	Slc22a8 (ENSMAUG00000013177) #19	Slc22a6 (ENSMAUG00000013676) #20	Chrm1 (ENSMAUG00000013069) #22	ENSMAUG00000013060 #23	ENSMAUG00000013043 #23	Wdr74 (ENSMAUG00000012992)	Tex54 (ENSMAUG00000013004)	Stx5a (ENSMAUG00000013701)	Nxf1 (ENSMAUG00000014572)	Tmem223 (ENSMAUG00000012961)	Tmem179b (ENSMAUG00000012885)	Taf6l (ENSMAUG00000015095)	Polr2g (ENSMAUG00000013079)	Zbtb3 (ENSMAUG00000013055)	Ttc9c (ENSMAUG00000013136)	Hnrnpul2 (ENSMAUG00000013163)	Gng3 (ENSMAUG00000012624)	Bscl2 (ENSMAUG00000012700)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c.b #18	ENSGT00940000161239.d #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Prairie vole	MODERN SPECIES	16	Rcor2 (ENSMOCG00000001766)	Mark2 (ENSMOCG00000015697)	Spindoc (ENSMOCG00000016927) #7	ENSMOCG00000016523 #8	ENSMOCG00000001558 #9	Atl3 (ENSMOCG00000014305) #11	Plaat3 (ENSMOCG00000016945) #12	Lgals12 (ENSMOCG00000019635) #16	Plaat5 (ENSMOCG00000016896) #17	Slc22a19 (ENSMOCG00000020438) #18	ENSMOCG00000001921	ENSMOCG00000019218 #18	ENSMOCG00000002914 #18	Slc22a8 (ENSMOCG00000011371) #19	Slc22a6 (ENSMOCG00000021104) #20	Chrm1 (ENSMOCG00000002497) #22	ENSMOCG00000009004 #23	ENSMOCG00000003857	Tex54 (ENSMOCG00000020857)	Stx5a (ENSMOCG00000021699)	Nxf1 (ENSMOCG00000000939)	Tmem223 (ENSMOCG00000010044)	Tmem179b (ENSMOCG00000012843)	Taf6l (ENSMOCG00000019616)	Polr2g (ENSMOCG00000010638)	Zbtb3 (ENSMOCG00000002963)	Ttc9c (ENSMOCG00000019481)	Hnrnpul2 (ENSMOCG00000020000)	Gng3 (ENSMOCG00000020628)	ENSMOCG00000009001	Lrrn4cl (ENSMOCG00000009512)
Northern American deer mouse	MODERN SPECIES		Zfta (ENSPEMG00000015536) #8	ENSPEMG00000006921 #9	Atl3 (ENSPEMG00000017714) #11	Plaat3 (ENSPEMG00000015751) #12	Lgals12 (ENSPEMG00000002696) #16	Plaat5 (ENSPEMG00000007949) #17	ENSPEMG00000030267 #18	Slc22a19 (ENSPEMG00000011237) #18	ENSPEMG00000025385 #18	ENSPEMG00000017469 #18	ENSPEMG00000025227 #18	ENSPEMG00000008490 #18	Slc22a8 (ENSPEMG00000005685) #19	Slc22a6 (ENSPEMG00000010064) #20	ENSPEMG00000024846 #21	Chrm1 (ENSPEMG00000027279) #22	Slc3a2 (ENSPEMG00000017251) #23	Wdr74 (ENSPEMG00000008678)	Tex54 (ENSPEMG00000012036)	Stx5a (ENSPEMG00000017791)	Nxf1 (ENSPEMG00000006139)	Tmem223 (ENSPEMG00000017084)	Tmem179b (ENSPEMG00000011859)	Taf6l (ENSPEMG00000011799)	Polr2g (ENSPEMG00000000685)	Zbtb3 (ENSPEMG00000018613)	Ttc9c (ENSPEMG00000026108)	Hnrnpul2 (ENSPEMG00000015546)	Gng3 (ENSPEMG00000028724)	Bscl2 (ENSPEMG00000031381)	Lrrn4cl (ENSPEMG00000016106)
Murinae	ANCESTRAL SPECIES		ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c.b #18	ENSGT00940000161239.d #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Mus	ANCESTRAL SPECIES		ENSGT00390000006979.a	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c.b #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c.b #18	ENSGT00940000161239.d #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c.b #18	ENSGT00940000161239.c.a.a #18	ENSGT00940000161239.d #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Mus_C	ANCESTRAL SPECIES	25	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.c.b #18	ENSGT00940000161239.c.a.a #18	ENSGT00940000161239.d #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
spretus	MODERN SPECIES	10	Cox8a (MGP_SPRETEiJ_G0023543)	Naa40 (MGP_SPRETEiJ_G0023544)	Rcor2 (MGP_SPRETEiJ_G0023545)	Mark2 (MGP_SPRETEiJ_G0023546)	Spindoc (MGP_SPRETEiJ_G0023547) #7	Zfta (MGP_SPRETEiJ_G0023548) #8	Rtn3 (MGP_SPRETEiJ_G0023549) #9	Atl3 (MGP_SPRETEiJ_G0023550) #11	Plaat3 (MGP_SPRETEiJ_G0023551) #12	Lgals12 (MGP_SPRETEiJ_G0023552) #16	MGP_SPRETEiJ_G0023553 #17	Slc22a19 (MGP_SPRETEiJ_G0023554) #18	MGP_SPRETEiJ_G0023555 #18	Slc22a8 (MGP_SPRETEiJ_G0023557) #19	Slc22a6 (MGP_SPRETEiJ_G0023558) #20	Chrm1 (MGP_SPRETEiJ_G0023559) #22	Slc3a2 (MGP_SPRETEiJ_G0023560) #23	Wdr74 (MGP_SPRETEiJ_G0023561)	Tex54 (MGP_SPRETEiJ_G0023562)	Stx5a (MGP_SPRETEiJ_G0023563)	Taf6l (MGP_SPRETEiJ_G0023565)	Polr2g (MGP_SPRETEiJ_G0023566)	Zbtb3 (MGP_SPRETEiJ_G0023567)	Ttc9c (MGP_SPRETEiJ_G0023568)	Hnrnpul2 (MGP_SPRETEiJ_G0023569)	Gng3 (MGP_SPRETEiJ_G0023570)	Bscl2 (MGP_SPRETEiJ_G0023571)	Lrrn4cl (MGP_SPRETEiJ_G0023572)	Ubxn1 (MGP_SPRETEiJ_G0023573)	Uqcc3 (MGP_SPRETEiJ_G0023574)	MGP_SPRETEiJ_G0023575
Steppe mouse	MODERN SPECIES	2426													ENSMSIG00000031185 #18	Slc22a8 (ENSMSIG00000031186) #19	Slc22a6 (ENSMSIG00000031188) #20	Chrm1 (ENSMSIG00000031191) #22	Slc3a2 (ENSMSIG00000031194) #23	Wdr74 (ENSMSIG00000031207)	Tex54 (ENSMSIG00000031210)	ENSMSIG00000031211	Nxf1 (ENSMSIG00000031212)	Tmem223 (ENSMSIG00000031214)	Tmem179b (ENSMSIG00000031215)	Taf6l (ENSMSIG00000031216)	Polr2g (ENSMSIG00000031217)	Zbtb3 (ENSMSIG00000031218)	Ttc9c (ENSMSIG00000031219)	Hnrnpul2 (ENSMSIG00000031220)	Gng3 (ENSMSIG00000031221)	Bscl2 (ENSMSIG00000031222)	Lrrn4cl (ENSMSIG00000031223)
Mouse	MODERN SPECIES	10	Spindoc (ENSMUSG00000024970) #7	Zfta (ENSMUSG00000053080) #8	Rtn3 (ENSMUSG00000024758) #9	Atl3 (ENSMUSG00000024759) #11	Plaat3 (ENSMUSG00000060675) #12	Lgals12 (ENSMUSG00000024972) #16	Plaat5 (ENSMUSG00000024973) #17	Slc22a19 (ENSMUSG00000024757) #18	Slc22a26 (ENSMUSG00000053303) #18	Slc22a27 (ENSMUSG00000067656) #18	Slc22a28 (ENSMUSG00000063590) #18	Slc22a29 (ENSMUSG00000075044) #18	Slc22a30 (ENSMUSG00000052562) #18	Slc22a8 (ENSMUSG00000063796) #19	Slc22a6 (ENSMUSG00000024650) #20	Chrm1 (ENSMUSG00000032773) #22	Slc3a2 (ENSMUSG00000010095) #23	Wdr74 (ENSMUSG00000042729)	Tex54 (ENSMUSG00000090840)	Stx5a (ENSMUSG00000010110)	Nxf1 (ENSMUSG00000010097)	Tmem223 (ENSMUSG00000117924)	Tmem179b (ENSMUSG00000118346)	Taf6l (ENSMUSG00000003680)	Polr2g (ENSMUSG00000071662)	Zbtb3 (ENSMUSG00000071661)	Ttc9c (ENSMUSG00000071660)	Hnrnpul2 (ENSMUSG00000071659)	Gng3 (ENSMUSG00000071658)	Bscl2 (ENSMUSG00000071657)	Lrrn4cl (ENSMUSG00000071656)
Ryukyu mouse	MODERN SPECIES	10	Flrt1 (MGP_CAROLIEiJ_G0022631)	MGP_CAROLIEiJ_G0022632	Cox8a (MGP_CAROLIEiJ_G0022633)	Naa40 (MGP_CAROLIEiJ_G0022634)	Rcor2 (MGP_CAROLIEiJ_G0022635)	Mark2 (MGP_CAROLIEiJ_G0022636)	Spindoc (MGP_CAROLIEiJ_G0022637) #7	Zfta (MGP_CAROLIEiJ_G0022638) #8	Rtn3 (MGP_CAROLIEiJ_G0022639) #9	Atl3 (MGP_CAROLIEiJ_G0022640) #11	Plaat3 (MGP_CAROLIEiJ_G0022641) #12	Lgals12 (MGP_CAROLIEiJ_G0022642) #16	MGP_CAROLIEiJ_G0022643 #17	Slc22a8 (MGP_CAROLIEiJ_G0022644) #19	Slc22a6 (MGP_CAROLIEiJ_G0022645) #20	Chrm1 (MGP_CAROLIEiJ_G0022646) #22	Slc3a2 (MGP_CAROLIEiJ_G0022647) #23	Wdr74 (MGP_CAROLIEiJ_G0022648)	Tex54 (MGP_CAROLIEiJ_G0022649)	Stx5a (MGP_CAROLIEiJ_G0022650)	Nxf1 (MGP_CAROLIEiJ_G0022651)	Tmem179b (MGP_CAROLIEiJ_G0022652)	Polr2g (MGP_CAROLIEiJ_G0022653)	Zbtb3 (MGP_CAROLIEiJ_G0022654)	Ttc9c (MGP_CAROLIEiJ_G0022655)	Hnrnpul2 (MGP_CAROLIEiJ_G0022656)	Gng3 (MGP_CAROLIEiJ_G0022657)	Bscl2 (MGP_CAROLIEiJ_G0022658)	Lrrn4cl (MGP_CAROLIEiJ_G0022659)	Ubxn1 (MGP_CAROLIEiJ_G0022660)	Uqcc3 (MGP_CAROLIEiJ_G0022661)
Shrew mouse	MODERN SPECIES		Otub1 (MGP_PahariEiJ_G0014126)	Cox8a (MGP_PahariEiJ_G0014127)	Naa40 (MGP_PahariEiJ_G0014128)	Rcor2 (MGP_PahariEiJ_G0014129)	Mark2 (MGP_PahariEiJ_G0014130)	Spindoc (MGP_PahariEiJ_G0014131) #7	Zfta (MGP_PahariEiJ_G0014132) #8	Rtn3 (MGP_PahariEiJ_G0014133) #9	Atl3 (MGP_PahariEiJ_G0014134) #11	Plaat3 (MGP_PahariEiJ_G0014135) #12	Lgals12 (MGP_PahariEiJ_G0014136) #16	MGP_PahariEiJ_G0014137 #17	MGP_PahariEiJ_G0014138 #18	Slc22a8 (MGP_PahariEiJ_G0014139) #19	Slc22a6 (MGP_PahariEiJ_G0014140) #20	Chrm1 (MGP_PahariEiJ_G0014141) #22	Slc3a2 (MGP_PahariEiJ_G0014142) #23	Wdr74 (MGP_PahariEiJ_G0014143)	Tex54 (MGP_PahariEiJ_G0014144)	MGP_PahariEiJ_G0014145	Nxf1 (MGP_PahariEiJ_G0014146)	Taf6l (MGP_PahariEiJ_G0014147)	Polr2g (MGP_PahariEiJ_G0014148)	Zbtb3 (MGP_PahariEiJ_G0014149)	Ttc9c (MGP_PahariEiJ_G0014150)	Hnrnpul2 (MGP_PahariEiJ_G0014151)	Gng3 (MGP_PahariEiJ_G0014152)	Bscl2 (MGP_PahariEiJ_G0014153)	Lrrn4cl (MGP_PahariEiJ_G0014154)	Ubxn1 (MGP_PahariEiJ_G0014155)	Uqcc3 (MGP_PahariEiJ_G0014156)
Rat	MODERN SPECIES		Spindoc (ENSRNOG00000025061) #7	Zfta (ENSRNOG00000032042) #8	Rtn3 (ENSRNOG00000021202) #9	Atl3 (ENSRNOG00000021203) #11	ENSRNOG00000066743	Plaat3 (ENSRNOG00000021206) #12	Lgals12 (ENSRNOG00000021207) #16	Plaat5 (ENSRNOG00000023528) #17	Slc22a24 (ENSRNOG00000056396) #18	Dnajb6-ps10 (ENSRNOG00000017884)	UST4r (ENSRNOG00000049826) #18	Ust5r (ENSRNOG00000061890) #18	Slc22a25 (ENSRNOG00000017964) #18	Slc22a8 (ENSRNOG00000018086) #19	Slc22a6 (ENSRNOG00000018215) #20	Chrm1 (ENSRNOG00000018385) #22	Slc3a2 (ENSRNOG00000018487) #23	LOC690251 (ENSRNOG00000029315)	Wdr74 (ENSRNOG00000042878)	LOC120099984 (ENSRNOG00000063481)	Stx5 (ENSRNOG00000018847)	Nxf1 (ENSRNOG00000019069)	Tmem223 (ENSRNOG00000019266)	Tmem179b (ENSRNOG00000019341)	Taf6l (ENSRNOG00000019419)	Zbtb3 (ENSRNOG00000019461)	Polr2g (ENSRNOG00000019439)	Ttc9c (ENSRNOG00000019464)	Hnrnpul2 (ENSRNOG00000019507)	Gng3 (ENSRNOG00000019570)	Bscl2 (ENSRNOG00000052393)
Upper Galilee mountains blind mole rat	MODERN SPECIES	993													ENSNGAG00000006190 #18	Slc22a8 (ENSNGAG00000017037) #19	Slc22a6 (ENSNGAG00000017578) #20	Chrm1 (ENSNGAG00000002773) #22	ENSNGAG00000014580 #23	Wdr74 (ENSNGAG00000018778)	ENSNGAG00000017211	ENSNGAG00000011098	Nxf1 (ENSNGAG00000001539)	Tmem223 (ENSNGAG00000013203)	Tmem179b (ENSNGAG00000019915)	Taf6l (ENSNGAG00000020944)	Polr2g (ENSNGAG00000020624)	Zbtb3 (ENSNGAG00000004122)	Ttc9c (ENSNGAG00000010773)	Hnrnpul2 (ENSNGAG00000012005)	Gng3 (ENSNGAG00000017324)	Bscl2 (ENSNGAG00000001576)	Lrrn4cl (ENSNGAG00000019480)
Lesser Egyptian jerboa	MODERN SPECIES	60	Cox8a (ENSJJAG00000022271)	Naa40 (ENSJJAG00000010926)	Rcor2 (ENSJJAG00000000799)	Mark2 (ENSJJAG00000018612)	Spindoc (ENSJJAG00000014147) #7	Zfta (ENSJJAG00000019968) #8	ENSJJAG00000016262 #9	ENSJJAG00000006253 #11	ENSJJAG00000017667	Plaat3 (ENSJJAG00000021915) #12	Lgals12 (ENSJJAG00000014881) #16	Plaat5 (ENSJJAG00000020253) #17	ENSJJAG00000010614 #18	Slc22a8 (ENSJJAG00000023072) #19	Slc22a6 (ENSJJAG00000009093) #20	Chrm1 (ENSJJAG00000013856) #22	ENSJJAG00000001125 #23	Wdr74 (ENSJJAG00000001449)	Stx5a (ENSJJAG00000023191)	Nxf1 (ENSJJAG00000017480)	Tmem223 (ENSJJAG00000020948)	Tmem179b (ENSJJAG00000010561)	Taf6l (ENSJJAG00000017255)	ENSJJAG00000009540	Polr2g (ENSJJAG00000005019)	Zbtb3 (ENSJJAG00000024243)	ENSJJAG00000008957	Hnrnpul2 (ENSJJAG00000011206)	Gng3 (ENSJJAG00000015400)	ENSJJAG00000019301	Ubxn1 (ENSJJAG00000012631)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000162301 #22
Common shrew	MODERN SPECIES	4951																CHRM1 (ENSSARG00000011095) #22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162660.b.e.b	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.a #18	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Suina	ANCESTRAL SPECIES	14	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.a #18	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT01090000260892	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Chacoan peccary	MODERN SPECIES	920	MARK2 (ENSCWAG00000016084)	SPINDOC (ENSCWAG00000016361) #7	ZFTA (ENSCWAG00000016412) #8	RTN3 (ENSCWAG00000016492) #9	ATL3 (ENSCWAG00000016882) #11	PLAAT3 (ENSCWAG00000016923) #12	PLAAT4 (ENSCWAG00000016973) #15	LGALS12 (ENSCWAG00000017018) #16	ENSCWAG00000017126	PLAAT5 (ENSCWAG00000017146) #17	SLC22A9 (ENSCWAG00000017234) #18	ENSCWAG00000017311	SLC22A8 (ENSCWAG00000017452) #19	SLC22A6 (ENSCWAG00000017692) #20	ENSCWAG00000018111	CHRM1 (ENSCWAG00000018122) #22	SLC3A2 (ENSCWAG00000018136) #23	WDR74 (ENSCWAG00000018241)	STX5 (ENSCWAG00000018346)	NXF1 (ENSCWAG00000018375)	TMEM223 (ENSCWAG00000018420)	TMEM179B (ENSCWAG00000018442)	TAF6L (ENSCWAG00000018470)	POLR2G (ENSCWAG00000018485)	ZBTB3 (ENSCWAG00000018506)	TTC9C (ENSCWAG00000018515)	HNRNPUL2 (ENSCWAG00000018533)	BSCL2 (ENSCWAG00000018615)	GNG3 (ENSCWAG00000018653)	LRRN4CL (ENSCWAG00000018681)	UBXN1 (ENSCWAG00000018701)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.a #18	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Camelidae	ANCESTRAL SPECIES	55							ENSGT00940000162436 #17	ENSGT00940000161239.k.a.a #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.b.f	ENSGT00940000163667.b.e	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589.e	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Arabian camel	MODERN SPECIES	1	ZFTA (ENSCDRG00005019367) #8	RTN3 (ENSCDRG00005019397) #9	ATL3 (ENSCDRG00005019542) #11	PLAAT3 (ENSCDRG00005019659) #12	ENSCDRG00005019739	LGALS12 (ENSCDRG00005019752) #16	ENSCDRG00005019804 #17	ENSCDRG00005019903 #18	ENSCDRG00005019931 #18	ENSCDRG00005019949	ENSCDRG00005019998	SLC22A8 (ENSCDRG00005020013) #19	SLC22A6 (ENSCDRG00005020053) #20	ENSCDRG00005020082 #20	ENSCDRG00005004630 #21	CHRM1 (ENSCDRG00005004637) #22	SLC3A2 (ENSCDRG00005004655) #23	WDR74 (ENSCDRG00005004811)	STX5 (ENSCDRG00005004888)	NXF1 (ENSCDRG00005004967)	TMEM223 (ENSCDRG00005005013)	TMEM179B (ENSCDRG00005005027)	TAF6L (ENSCDRG00005005091)	POLR2G (ENSCDRG00005005119)	ZBTB3 (ENSCDRG00005005155)	TTC9C (ENSCDRG00005005167)	HNRNPUL2 (ENSCDRG00005005188)	GNG3 (ENSCDRG00005005252)	BSCL2 (ENSCDRG00005005265)	LRRN4CL (ENSCDRG00005005348)	UBXN1 (ENSCDRG00005005366)
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.a #18	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Pecora	ANCESTRAL SPECIES	13	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d.a.a #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.l #18	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Percora_a	ANCESTRAL SPECIES	16	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d.a.a #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.a #18	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.b	ENSGT00940000163667.a.c.a.b.a	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.p	ENSGT00940000160376	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000001930	ENSGT00510000049875
Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000154853.d.a.b.b #12	ENSGT00940000154853.d.a.b.a.b #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.a #18	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.b	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.b.b.b	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000163667.a.c.a.b.a	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.p	ENSGT00940000160376	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000001930	ENSGT00510000049875
Bovinae	ANCESTRAL SPECIES	24	ENSGT00940000154853.d.a.a #12	ENSGT00940000154853.d.a.b.b #12	ENSGT00940000154853.d.a.b.a.b #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.b	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.b.b.b	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000163667.a.c.a.b.a	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.p	ENSGT00940000160376	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000001930	ENSGT00510000049875
Bos	ANCESTRAL SPECIES	11	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d.a.a #12	ENSGT00940000154853.d.a.b.b #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.b	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.b.b.b	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.p.b	ENSGT00940000160376	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000001930	ENSGT00510000049875
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d.a.a #12	ENSGT00940000154853.d.a.b.b #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.b	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.a	ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00940000162994.f.d.k.a.a.a	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.p.a.a	ENSGT00940000161805.p.b	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639
Cow	MODERN SPECIES	21	ENSBTAG00000011019 #12	ENSBTAG00000037645	LGALS12 (ENSBTAG00000007108) #16	PLAAT5 (ENSBTAG00000032730) #17	ENSBTAG00000003236 #18	SLC22A9 (ENSBTAG00000039463) #18	ENSBTAG00000000518	ENSBTAG00000054320	SLC22A10 (ENSBTAG00000014584)	ENSBTAG00000038655	ENSBTAG00000037570	ENSBTAG00000050277	SLC22A8 (ENSBTAG00000013644) #19	SLC22A6 (ENSBTAG00000013642) #20	ENSBTAG00000047110 #20	CHRM1 (ENSBTAG00000011579) #22	ENSBTAG00000050000	SLC3A2 (ENSBTAG00000013240) #23	WDR74 (ENSBTAG00000009491)	ENSBTAG00000048482	STX5 (ENSBTAG00000009490)	NXF1 (ENSBTAG00000009488)	TMEM223 (ENSBTAG00000009487)	TMEM179B (ENSBTAG00000009486)	TAF6L (ENSBTAG00000009484)	POLR2G (ENSBTAG00000009483)	ZBTB3 (ENSBTAG00000021329)	TTC9C (ENSBTAG00000000773)	HNRNPUL2 (ENSBTAG00000002510)	GNG3 (ENSBTAG00000002508)	BSCL2 (ENSBTAG00000002503)
Bos_a	ANCESTRAL SPECIES	85												ENSGT00940000163667.a.c.a.b.b.a	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.p.b	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000001930
Wild yak	MODERN SPECIES	1714									ENSBMUG00000023806	ENSBMUG00000023781	ENSBMUG00000023761	ENSBMUG00000023753	SLC22A8 (ENSBMUG00000023746) #19	SLC22A6 (ENSBMUG00000023728) #20	ENSBMUG00000023697 #20	CHRM1 (ENSBMUG00000023670) #22	SLC3A2 (ENSBMUG00000023664) #23	WDR74 (ENSBMUG00000023565)	STX5 (ENSBMUG00000023529)	NXF1 (ENSBMUG00000023515)	TMEM223 (ENSBMUG00000023496)	TMEM179B (ENSBMUG00000023489)	TAF6L (ENSBMUG00000023469)	POLR2G (ENSBMUG00000023457)	ZBTB3 (ENSBMUG00000023437)	TTC9C (ENSBMUG00000023431)	HNRNPUL2 (ENSBMUG00000023420)	GNG3 (ENSBMUG00000023415)	BSCL2 (ENSBMUG00000023406)	UBXN1 (ENSBMUG00000023388)	UQCC3 (ENSBMUG00000023373)
American bison	MODERN SPECIES	3248	ENSBBBG00000020093 #12	ENSBBBG00000007440 #12	LGALS12 (ENSBBBG00000005432) #16	PLAAT5 (ENSBBBG00000005425) #17	ENSBBBG00000005424 #18	ENSBBBG00000020020 #18	ENSBBBG00000020008	ENSBBBG00000005407	ENSBBBG00000005111	ENSBBBG00000019974	ENSBBBG00000019971	ENSBBBG00000019967	SLC22A8 (ENSBBBG00000005123) #19	SLC22A6 (ENSBBBG00000019919) #20	ENSBBBG00000019891 #20	CHRM1 (ENSBBBG00000005365) #22	SLC3A2 (ENSBBBG00000019812) #23	WDR74 (ENSBBBG00000005172)	STX5 (ENSBBBG00000005199)	NXF1 (ENSBBBG00000019622)	TMEM223 (ENSBBBG00000019568)	TMEM179B (ENSBBBG00000019563)	TAF6L (ENSBBBG00000005295)	POLR2G (ENSBBBG00000008173)	ZBTB3 (ENSBBBG00000019531)	TTC9C (ENSBBBG00000005281)	HNRNPUL2 (ENSBBBG00000019515)	GNG3 (ENSBBBG00000019496)	BSCL2 (ENSBBBG00000005208)	LRRN4CL (ENSBBBG00000019428)	UBXN1 (ENSBBBG00000009187)
Caprinae	ANCESTRAL SPECIES	20	ENSGT00940000154853.d.a.b.b #12	ENSGT00940000154853.d.a.b.a.b #12	ENSGT00940000154853.d.a.b.a.a #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.a.a #18	ENSGT00940000161239.k.a.b #18	ENSGT00940000161239.k.b #18	ENSGT00940000163667.b	ENSGT00940000161239.l #18	ENSGT00940000163667.a.c.b	ENSGT00940000163667.a.c.a.a.c	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.p	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Rambouillet Sheep	MODERN SPECIES	13	ATL3 (ENSOARG00020022978) #11	ENSOARG00020022912 #12	ENSOARG00020022856 #12	LGALS12 (ENSOARG00020022698) #16	PLAAT5 (ENSOARG00020022652) #17	ENSOARG00020022597 #18	ENSOARG00020022570 #18	ENSOARG00020022539 #18	ENSOARG00020022510	ENSOARG00020022414	ENSOARG00020022359	ENSOARG00020022311	SLC22A8 (ENSOARG00020022122) #19	SLC22A6 (ENSOARG00020022001) #20	ENSOARG00020021949 #20	CHRM1 (ENSOARG00020021898) #22	SLC3A2 (ENSOARG00020021842) #23	WDR74 (ENSOARG00020021626)	STX5 (ENSOARG00020021530)	NXF1 (ENSOARG00020021483)	TMEM223 (ENSOARG00020021462)	TMEM179B (ENSOARG00020021391)	TAF6L (ENSOARG00020021329)	POLR2G (ENSOARG00020021260)	ZBTB3 (ENSOARG00020021245)	ENSOARG00020021233	TTC9C (ENSOARG00020021198)	HNRNPUL2 (ENSOARG00020021145)	GNG3 (ENSOARG00020021111)	BSCL2 (ENSOARG00020021030)	LRRN4CL (ENSOARG00020021003)
Goat	MODERN SPECIES	21	ATL3 (ENSCHIG00000022420) #11	ENSCHIG00000024459 #12	ENSCHIG00000014874 #12	ENSCHIG00000016166 #12	ENSCHIG00000003540 #16	ENSCHIG00000011083 #12	ENSCHIG00000020309 #16	PLAAT5 (ENSCHIG00000005227) #17	SLC22A9 (ENSCHIG00000000518) #18	ENSCHIG00000004328 #18	ENSCHIG00000025065	ENSCHIG00000012746	SLC22A8 (ENSCHIG00000015089) #19	SLC22A6 (ENSCHIG00000023566) #20	ENSCHIG00000027134 #20	CHRM1 (ENSCHIG00000012488) #22	SLC3A2 (ENSCHIG00000017772) #23	WDR74 (ENSCHIG00000022750)	STX5 (ENSCHIG00000026215)	NXF1 (ENSCHIG00000010065)	TMEM223 (ENSCHIG00000020466)	TMEM179B (ENSCHIG00000026546)	TAF6L (ENSCHIG00000013919)	POLR2G (ENSCHIG00000023730)	ZBTB3 (ENSCHIG00000008054)	TTC9C (ENSCHIG00000014645)	HNRNPUL2 (ENSCHIG00000020213)	GNG3 (ENSCHIG00000015824)	BSCL2 (ENSCHIG00000026480)	LRRN4CL (ENSCHIG00000009031)	UBXN1 (ENSCHIG00000006820)
Siberian musk deer	MODERN SPECIES	1224	ZFTA (ENSMMSG00000008490) #8	RTN3 (ENSMMSG00000008565) #9	ATL3 (ENSMMSG00000008889) #11	PLAAT3 (ENSMMSG00000008953) #12	LGALS12 (ENSMMSG00000009042) #16	PLAAT5 (ENSMMSG00000009542) #17	ENSMMSG00000009592 #18	ENSMMSG00000009715 #18	ENSMMSG00000011665 #18	ENSMMSG00000011721	ENSMMSG00000011784	ENSMMSG00000011868	ENSMMSG00000011879	SLC22A8 (ENSMMSG00000011893) #19	SLC22A6 (ENSMMSG00000012011) #20	CHRM1 (ENSMMSG00000012096) #22	SLC3A2 (ENSMMSG00000012111) #23	WDR74 (ENSMMSG00000012237)	STX5 (ENSMMSG00000012364)	ENSMMSG00000012430	TMEM223 (ENSMMSG00000012527)	TMEM179B (ENSMMSG00000012548)	TAF6L (ENSMMSG00000012575)	ENSMMSG00000012609	ZBTB3 (ENSMMSG00000012634)	TTC9C (ENSMMSG00000012643)	HNRNPUL2 (ENSMMSG00000012673)	BSCL2 (ENSMMSG00000012721)	ENSMMSG00000012801	LRRN4CL (ENSMMSG00000012817)	UBXN1 (ENSMMSG00000012852)
Yarkand deer	MODERN SPECIES	11	RTN3 (ENSCHYG00000000247) #9	ATL3 (ENSCHYG00000000208) #11	PLAAT3 (ENSCHYG00000000190) #12	LGALS12 (ENSCHYG00000000154) #16	ENSCHYG00000000141 #17	ENSCHYG00000000122 #18	ENSCHYG00000000102 #18	ENSCHYG00000000068 #18	ENSCHYG00000000059	ENSCHYG00000000040	ENSCHYG00000000030	ENSCHYG00000020357	ENSCHYG00000020101	SLC22A8 (ENSCHYG00000019926) #19	SLC22A6 (ENSCHYG00000019813) #20	CHRM1 (ENSCHYG00000019787) #22	SLC3A2 (ENSCHYG00000019634) #23	WDR74 (ENSCHYG00000019192)	ENSCHYG00000019153	STX5 (ENSCHYG00000018938)	NXF1 (ENSCHYG00000018593)	TMEM223 (ENSCHYG00000018545)	TMEM179B (ENSCHYG00000018397)	TAF6L (ENSCHYG00000018298)	POLR2G (ENSCHYG00000018228)	ZBTB3 (ENSCHYG00000018210)	TTC9C (ENSCHYG00000018166)	HNRNPUL2 (ENSCHYG00000017808)	GNG3 (ENSCHYG00000017765)	BSCL2 (ENSCHYG00000017544)	LRRN4CL (ENSCHYG00000017512)
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.b #18	ENSGT00940000163667.b	ENSGT00940000163667.a	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT01090000260892	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.b #18	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT01090000260892	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.m	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.b #18	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT01090000260892	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.m	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.b #18	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT01090000260892	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.m	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.k.b #18	ENSGT00940000163667.a	ENSGT00940000163667.b	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01090000260892	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805.m	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Beluga whale	MODERN SPECIES	7	MARK2 (ENSDLEG00000016893)	CUNH11orf84 (ENSDLEG00000016974) #7	ZFTA (ENSDLEG00000017003) #8	RTN3 (ENSDLEG00000017027) #9	ATL3 (ENSDLEG00000017041) #11	PLAAT3 (ENSDLEG00000017064) #12	LGALS12 (ENSDLEG00000017077) #16	ENSDLEG00000017093	ENSDLEG00000017101 #17	SLC22A9 (ENSDLEG00000017119) #18	ENSDLEG00000017168	ENSDLEG00000017182	SLC22A8 (ENSDLEG00000017206) #19	SLC22A6 (ENSDLEG00000017243) #20	ENSDLEG00000017288	CHRM1 (ENSDLEG00000017296) #22	SLC3A2 (ENSDLEG00000017306) #23	WDR74 (ENSDLEG00000017431)	STX5 (ENSDLEG00000017563)	NXF1 (ENSDLEG00000017803)	TMEM223 (ENSDLEG00000018313)	TMEM179B (ENSDLEG00000018318)	TAF6L (ENSDLEG00000018328)	POLR2G (ENSDLEG00000018335)	ZBTB3 (ENSDLEG00000018348)	TTC9C (ENSDLEG00000018352)	HNRNPUL2 (ENSDLEG00000018363)	GNG3 (ENSDLEG00000018479)	BSCL2 (ENSDLEG00000018487)	LRRN4CL (ENSDLEG00000018503)	UBXN1 (ENSDLEG00000018521)
Vaquita	MODERN SPECIES	19	NAA40 (ENSPSNG00000004631)	RCOR2 (ENSPSNG00000004582)	MARK2 (ENSPSNG00000004479)	SPINDOC (ENSPSNG00000004396) #7	ZFTA (ENSPSNG00000004374) #8	RTN3 (ENSPSNG00000004269) #9	ATL3 (ENSPSNG00000004187) #11	LGALS12 (ENSPSNG00000020749) #16	SLC22A9 (ENSPSNG00000020492) #18	ENSPSNG00000020456	ENSPSNG00000020372	SLC22A8 (ENSPSNG00000020185) #19	SLC22A6 (ENSPSNG00000019972) #20	ENSPSNG00000019902 #20	ENSPSNG00000019881	CHRM1 (ENSPSNG00000019868) #22	SLC3A2 (ENSPSNG00000019788) #23	WDR74 (ENSPSNG00000019672)	NXF1 (ENSPSNG00000019489)	TMEM223 (ENSPSNG00000019439)	TMEM179B (ENSPSNG00000019377)	TAF6L (ENSPSNG00000019327)	POLR2G (ENSPSNG00000019278)	ZBTB3 (ENSPSNG00000019250)	TTC9C (ENSPSNG00000019225)	HNRNPUL2 (ENSPSNG00000019048)	GNG3 (ENSPSNG00000019000)	BSCL2 (ENSPSNG00000018928)	LRRN4CL (ENSPSNG00000018896)	UBXN1 (ENSPSNG00000018815)	ENSPSNG00000018693
Sperm whale	MODERN SPECIES	1227															ENSPCTG00005015046	CHRM1 (ENSPCTG00005015023) #22
Blue whale	MODERN SPECIES	19	RCOR2 (ENSBMSG00010010142)	MARK2 (ENSBMSG00010009492)	SPINDOC (ENSBMSG00010009408) #7	ZFTA (ENSBMSG00010009395) #8	RTN3 (ENSBMSG00010009260) #9	ATL3 (ENSBMSG00010009168) #11	PLAAT3 (ENSBMSG00010009143) #12	LGALS12 (ENSBMSG00010009076) #16	PLAAT5 (ENSBMSG00010009039) #17	SLC22A9 (ENSBMSG00010009021) #18	ENSBMSG00010009002	ENSBMSG00010008993	SLC22A8 (ENSBMSG00010008957) #19	SLC22A6 (ENSBMSG00010008894) #20	ENSBMSG00010008869	CHRM1 (ENSBMSG00010008857) #22	SLC3A2 (ENSBMSG00010008809) #23	WDR74 (ENSBMSG00010008708)	NXF1 (ENSBMSG00010008667)	TMEM223 (ENSBMSG00010008640)	TMEM179B (ENSBMSG00010008625)	TAF6L (ENSBMSG00010008522)	POLR2G (ENSBMSG00010008473)	ZBTB3 (ENSBMSG00010008452)	TTC9C (ENSBMSG00010008436)	HNRNPUL2 (ENSBMSG00010008413)	GNG3 (ENSBMSG00010008393)	BSCL2 (ENSBMSG00010008336)	LRRN4CL (ENSBMSG00010008324)	UBXN1 (ENSBMSG00010008293)	UQCC3 (ENSBMSG00010008263)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.b	ENSGT00390000011639	ENSGT01100000263497.B.c.a	ENSGT00940000162696
Caniformia	ANCESTRAL SPECIES	21	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.b	ENSGT00390000011639	ENSGT01100000263497.B.c.a	ENSGT00940000162696
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162660.b.e.b	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.b	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Ursidae	ANCESTRAL SPECIES	2	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162660.b.e.b	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.b	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457.cb
Ursus	ANCESTRAL SPECIES	63										ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.b	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457.cb
Polar bear	MODERN SPECIES	303										ENSUMAG00000014844 #17	SLC22A9 (ENSUMAG00000014693) #18	SLC22A10 (ENSUMAG00000014649)	SLC22A8 (ENSUMAG00000014618) #19	SLC22A6 (ENSUMAG00000014598) #20	ENSUMAG00000014595 #21	CHRM1 (ENSUMAG00000014593) #22	SLC3A2 (ENSUMAG00000014587) #23	WDR74 (ENSUMAG00000014565)	STX5 (ENSUMAG00000014558)	NXF1 (ENSUMAG00000014552)	TMEM179B (ENSUMAG00000014547)	ENSUMAG00000014541	POLR2G (ENSUMAG00000014537)	ZBTB3 (ENSUMAG00000014533)	TTC9C (ENSUMAG00000014527)	HNRNPUL2 (ENSUMAG00000014465)	GNG3 (ENSUMAG00000014458)	BSCL2 (ENSUMAG00000014444)	LRRN4CL (ENSUMAG00000014439)	UBXN1 (ENSUMAG00000014411)	UQCC3 (ENSUMAG00000014404)
American black bear	MODERN SPECIES	3685													SLC22A8 (ENSUAMG00000017118) #19	SLC22A6 (ENSUAMG00000017121) #20	ENSUAMG00000017125 #21	CHRM1 (ENSUAMG00000017126) #22	SLC3A2 (ENSUAMG00000017134) #23	WDR74 (ENSUAMG00000017153)	ENSUAMG00000017188
Giant Panda	MODERN SPECIES	7	COX8A (ENSAMEG00000026424)	NAA40 (ENSAMEG00000030824)	RCOR2 (ENSAMEG00000018101)	MARK2 (ENSAMEG00000018111)	SPINDOC (ENSAMEG00000018132) #7	ZFTA (ENSAMEG00000025175) #8	RTN3 (ENSAMEG00000018135) #9	ATL3 (ENSAMEG00000018141) #11	PLAAT3 (ENSAMEG00000023459) #12	ENSAMEG00000018150	LGALS12 (ENSAMEG00000027710) #16	SLC22A9 (ENSAMEG00000005817) #18	SLC22A10 (ENSAMEG00000005956)	SLC22A8 (ENSAMEG00000005991) #19	SLC22A6 (ENSAMEG00000006012) #20	CHRM1 (ENSAMEG00000020258) #22	SLC3A2 (ENSAMEG00000006140) #23	WDR74 (ENSAMEG00000006160)	STX5 (ENSAMEG00000006206)	NXF1 (ENSAMEG00000006237)	TMEM223 (ENSAMEG00000024479)	TMEM179B (ENSAMEG00000006357)	TAF6L (ENSAMEG00000006364)	POLR2G (ENSAMEG00000006386)	ZBTB3 (ENSAMEG00000024771)	TTC9C (ENSAMEG00000006425)	HNRNPUL2 (ENSAMEG00000006434)	ENSAMEG00000002116	GNG3 (ENSAMEG00000006462)	BSCL2 (ENSAMEG00000006466)	UBXN1 (ENSAMEG00000006490)
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.b	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Ferret	MODERN SPECIES	314	NAA40 (ENSMPUG00000013317)	RCOR2 (ENSMPUG00000013320)	MARK2 (ENSMPUG00000013326)	SPINDOC (ENSMPUG00000013338) #7	ZFTA (ENSMPUG00000013353) #8	ENSMPUG00000013356 #9	ATL3 (ENSMPUG00000013363) #11	ENSMPUG00000013476 #12	ENSMPUG00000013479 #12	LGALS12 (ENSMPUG00000013482) #16	PLAAT5 (ENSMPUG00000013509) #17	SLC22A9 (ENSMPUG00000013528) #18	ENSMPUG00000013536	SLC22A8 (ENSMPUG00000013544) #19	SLC22A6 (ENSMPUG00000013551) #20	CHRM1 (ENSMPUG00000019995) #22	SLC3A2 (ENSMPUG00000013553) #23	WDR74 (ENSMPUG00000013557)	TMEM179B (ENSMPUG00000013609)	STX5 (ENSMPUG00000013614)	NXF1 (ENSMPUG00000013658)	TMEM223 (ENSMPUG00000013664)	POLR2G (ENSMPUG00000013667)	ZBTB3 (ENSMPUG00000013694)	TTC9C (ENSMPUG00000013698)	HNRNPUL2 (ENSMPUG00000013707)	GNG3 (ENSMPUG00000013710)	BSCL2 (ENSMPUG00000013712)	UBXN1 (ENSMPUG00000013715)	LBHD1 (ENSMPUG00000013735)	CSKMT (ENSMPUG00000013738)
American mink	MODERN SPECIES	215									LGALS12 (ENSNVIG00000019356) #16	PLAAT5 (ENSNVIG00000019411) #17	SLC22A9 (ENSNVIG00000019546) #18	SLC22A10 (ENSNVIG00000020248)	SLC22A8 (ENSNVIG00000020290) #19	SLC22A6 (ENSNVIG00000020357) #20	ENSNVIG00000020395 #21	CHRM1 (ENSNVIG00000020398) #22	SLC3A2 (ENSNVIG00000020406) #23	WDR74 (ENSNVIG00000020499)	STX5 (ENSNVIG00000020600)	NXF1 (ENSNVIG00000020616)	TMEM223 (ENSNVIG00000020681)	TMEM179B (ENSNVIG00000020688)	TAF6L (ENSNVIG00000020709)	RPB7 (ENSNVIG00000020718)	ZBTB3 (ENSNVIG00000020739)	TTC9C (ENSNVIG00000020741)	HNRNPUL2 (ENSNVIG00000020754)	BSCL2 (ENSNVIG00000020778)	GBG3 (ENSNVIG00000020795)	LRRN4CL (ENSNVIG00000020803)	UBXN1 (ENSNVIG00000020815)
Canidae	ANCESTRAL SPECIES	13	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.a	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d.e #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.a	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Dog	MODERN SPECIES	9	RTN3 (ENSCAFG00845006009) #9	ATL3 (ENSCAFG00845006281) #11	ENSCAFG00845006483	PLAAT3 (ENSCAFG00845006522) #12	ENSCAFG00845006559 #14	PLAAT4 (ENSCAFG00845006599) #15	LGALS12 (ENSCAFG00845006674) #16	PLAAT5 (ENSCAFG00845006736) #17	SLC22A9 (ENSCAFG00845006786) #18	SLC22A10 (ENSCAFG00845006977)	ENSCAFG00845007034	ENSCAFG00845007087 #18	ENSCAFG00845007123	ENSCAFG00845007168 #19	SLC22A6 (ENSCAFG00845007241) #20	CHRM1 (ENSCAFG00845007309) #22	SLC3A2 (ENSCAFG00845007354) #23	WDR74 (ENSCAFG00845007617)	STX5 (ENSCAFG00845007709)	NXF1 (ENSCAFG00845007836)	TMEM179B (ENSCAFG00845008033)	TMEM223 (ENSCAFG00845008107)	TAF6L (ENSCAFG00845008143)	POLR2G (ENSCAFG00845008221)	ZBTB3 (ENSCAFG00845008270)	TTC9C (ENSCAFG00845008314)	HNRNPUL2 (ENSCAFG00845008372)	BSCL2 (ENSCAFG00845008494)	GNG3 (ENSCAFG00845008569)	LRRN4CL (ENSCAFG00845008587)	UBXN1 (ENSCAFG00845008628)
Dingo	MODERN SPECIES	36	ZFTA (ENSCAFG00020013984) #8	ENSCAFG00020013944 #9	ENSCAFG00020013937	ATL3 (ENSCAFG00020013890) #11	PLAAT3 (ENSCAFG00020013886) #12	ENSCAFG00020013885 #14	PLAAT4 (ENSCAFG00020013883) #15	LGALS12 (ENSCAFG00020013880) #16	ENSCAFG00020013852 #17	SLC22A9 (ENSCAFG00020013593) #18	ENSCAFG00020013569	SLC22A10 (ENSCAFG00020013312)	ENSCAFG00020013304 #18	SLC22A8 (ENSCAFG00020013254) #19	SLC22A6 (ENSCAFG00020013234) #20	CHRM1 (ENSCAFG00020013229) #22	SLC3A2 (ENSCAFG00020013226) #23	WDR74 (ENSCAFG00020013159)	STX5 (ENSCAFG00020013153)	NXF1 (ENSCAFG00020013149)	TMEM223 (ENSCAFG00020013148)	TMEM179B (ENSCAFG00020013145)	TAF6L (ENSCAFG00020013140)	POLR2G (ENSCAFG00020013136)	ZBTB3 (ENSCAFG00020013133)	TTC9C (ENSCAFG00020013129)	HNRNPUL2 (ENSCAFG00020013120)	GNG3 (ENSCAFG00020013115)	BSCL2 (ENSCAFG00020013107)	LRRN4CL (ENSCAFG00020013104)	UBXN1 (ENSCAFG00020013102)
Red fox	MODERN SPECIES	49	MARK2 (ENSVVUG00000029791)	SPINDOC (ENSVVUG00000029796) #7	ZFTA (ENSVVUG00000029797) #8	RTN3 (ENSVVUG00000029798) #9	ATL3 (ENSVVUG00000029799) #11	PLA2G16 (ENSVVUG00000029803) #12	ENSVVUG00000029804 #14	RARRES3 (ENSVVUG00000029807) #15	LGALS12 (ENSVVUG00000029809) #16	ENSVVUG00000029813 #17	SLC22A9 (ENSVVUG00000029817) #18	SLC22A10 (ENSVVUG00000029819)	ENSVVUG00000029820 #18	SLC22A8 (ENSVVUG00000029821) #19	SLC22A6 (ENSVVUG00000029822) #20	CHRM1 (ENSVVUG00000029823) #22	SLC3A2 (ENSVVUG00000029824) #23	WDR74 (ENSVVUG00000029836)	STX5 (ENSVVUG00000029839)	NXF1 (ENSVVUG00000029840)	TMEM223 (ENSVVUG00000029841)	TMEM179B (ENSVVUG00000029842)	TAF6L (ENSVVUG00000029843)	POLR2G (ENSVVUG00000029844)	TTC9C (ENSVVUG00000029845)	HNRNPUL2 (ENSVVUG00000029847)	GNG3 (ENSVVUG00000029850)	BSCL2 (ENSVVUG00000029852)	ENSVVUG00000029854	UBXN1 (ENSVVUG00000029856)	UQCC3 (ENSVVUG00000029857)
Felidae	ANCESTRAL SPECIES		ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000163667	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.b	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Panthera	ANCESTRAL SPECIES	18	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000163667	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.b	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Tiger	MODERN SPECIES	369	NAA40 (ENSPTIG00000010415)	RCOR2 (ENSPTIG00000012240)	MARK2 (ENSPTIG00000013108)	SPINDOC (ENSPTIG00000007294) #7	ENSPTIG00000008262 #9	ATL3 (ENSPTIG00000009817) #11	PLAAT3 (ENSPTIG00000012106) #12	LGALS12 (ENSPTIG00000013920) #16	PLAAT5 (ENSPTIG00000016710) #17	SLC22A9 (ENSPTIG00000018254) #18	ENSPTIG00000019174	ENSPTIG00000006918 #18	SLC22A8 (ENSPTIG00000019571) #19	SLC22A6 (ENSPTIG00000008570) #20	ENSPTIG00000007098 #21	CHRM1 (ENSPTIG00000007102) #22	SLC3A2 (ENSPTIG00000012539) #23	WDR74 (ENSPTIG00000016962)	STX5 (ENSPTIG00000005204)	NXF1 (ENSPTIG00000008897)	ENSPTIG00000014441	TAF6L (ENSPTIG00000014940)	POLR2G (ENSPTIG00000015781)	ZBTB3 (ENSPTIG00000016774)	TTC9C (ENSPTIG00000017476)	HNRNPUL2 (ENSPTIG00000017670)	ENSPTIG00000019130	BSCL2 (ENSPTIG00000019239)	LRRN4CL (ENSPTIG00000000217)	UBXN1 (ENSPTIG00000008345)	UQCC3 (ENSPTIG00000012993)
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000163667	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B.c.b	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
lion	MODERN SPECIES	10	NAA40 (ENSPLOG00000010750)	RCOR2 (ENSPLOG00000010654)	MARK2 (ENSPLOG00000010018)	SPINDOC (ENSPLOG00000009801) #7	ZFTA (ENSPLOG00000009772) #8	RTN3 (ENSPLOG00000009548) #9	ATL3 (ENSPLOG00000009379) #11	PLAAT3 (ENSPLOG00000009329) #12	ENSPLOG00000009308 #15	LGALS12 (ENSPLOG00000009103) #16	ENSPLOG00000008882 #17	SLC22A9 (ENSPLOG00000008724) #18	ENSPLOG00000008688	ENSPLOG00000008657 #18	SLC22A6 (ENSPLOG00000008482) #20	CHRM1 (ENSPLOG00000008442) #22	SLC3A2 (ENSPLOG00000008401) #23	WDR74 (ENSPLOG00000008195)	STX5 (ENSPLOG00000008115)	NXF1 (ENSPLOG00000007934)	TMEM223 (ENSPLOG00000007904)	TMEM179B (ENSPLOG00000007851)	TAF6L (ENSPLOG00000007778)	POLR2G (ENSPLOG00000007747)	ZBTB3 (ENSPLOG00000007729)	TTC9C (ENSPLOG00000007708)	HNRNPUL2 (ENSPLOG00000007617)	ENSPLOG00000007595	BSCL2 (ENSPLOG00000007556)	LRRN4CL (ENSPLOG00000009871)	UBXN1 (ENSPLOG00000009769)
leopard	MODERN SPECIES	64	RCOR2 (ENSPPRG00000005918)	MARK2 (ENSPPRG00000009691)	SPINDOC (ENSPPRG00000010767) #7	ZFTA (ENSPPRG00000011316) #8	ENSPPRG00000012195 #9	ATL3 (ENSPPRG00000012865) #11	PLAAT3 (ENSPPRG00000013267) #12	LGALS12 (ENSPPRG00000015392) #16	PLAAT5 (ENSPPRG00000017226) #17	SLC22A9 (ENSPPRG00000019825) #18	ENSPPRG00000015426 #18	SLC22A8 (ENSPPRG00000023668) #19	SLC22A6 (ENSPPRG00000000682) #20	ENSPPRG00000015606 #21	ENSPPRG00000015614 #21	CHRM1 (ENSPPRG00000015634) #22	SLC3A2 (ENSPPRG00000001175) #23	WDR74 (ENSPPRG00000002422)	STX5 (ENSPPRG00000003034)	NXF1 (ENSPPRG00000004342)	TMEM223 (ENSPPRG00000004902)	TMEM179B (ENSPPRG00000005200)	TAF6L (ENSPPRG00000005589)	POLR2G (ENSPPRG00000005669)	ZBTB3 (ENSPPRG00000005891)	TTC9C (ENSPPRG00000005993)	HNRNPUL2 (ENSPPRG00000006380)	ENSPPRG00000006909	BSCL2 (ENSPPRG00000008935)	LRRN4CL (ENSPPRG00000015844)	UBXN1 (ENSPPRG00000010233)
Cat	MODERN SPECIES	241	MARK2 (ENSFCAG00000014652)	SPINDOC (ENSFCAG00000014649) #7	CD1H11orf95 (ENSFCAG00000032639) #8	RTN3 (ENSFCAG00000023202) #9	ATL3 (ENSFCAG00000031360) #11	PLAAT3 (ENSFCAG00000001309) #12	PLAAT2 (ENSFCAG00000036450) #14	ENSFCAG00000051640 #15	LGALS12 (ENSFCAG00000014648) #16	PLAAT5 (ENSFCAG00000030094) #17	SLC22A25 (ENSFCAG00000018565)	ENSFCAG00000041221	SLC22A8 (ENSFCAG00000005255) #19	SLC22A6 (ENSFCAG00000005247) #20	ENSFCAG00000035000 #21	CHRM1 (ENSFCAG00000000336) #22	SLC3A2 (ENSFCAG00000014781) #23	WDR74 (ENSFCAG00000014780)	STX5 (ENSFCAG00000014778)	NXF1 (ENSFCAG00000014774)	TMEM223 (ENSFCAG00000025098)	TMEM179B (ENSFCAG00000014773)	TAF6L (ENSFCAG00000022346)	POLR2G (ENSFCAG00000026072)	ZBTB3 (ENSFCAG00000044175)	TTC9C (ENSFCAG00000014768)	HNRNPUL2 (ENSFCAG00000014766)	ENSFCAG00000035265	BSCL2 (ENSFCAG00000018428)	LRRN4CL (ENSFCAG00000044682)	UBXN1 (ENSFCAG00000008866)
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00940000154196.a	ENSGT00940000155031.d	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000154853.d #12	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031.d	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.c #14	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT01080000257483 #21	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Greater horseshoe bat	MODERN SPECIES	2	NAA40 (ENSRFEG00010009063)	RCOR2 (ENSRFEG00010009161)	MARK2 (ENSRFEG00010009280)	SPINDOC (ENSRFEG00010009495) #7	ZFTA (ENSRFEG00010009546) #8	RTN3 (ENSRFEG00010009595) #9	ATL3 (ENSRFEG00010009831) #11	ENSRFEG00010010034 #15	ENSRFEG00010010178 #15	LGALS12 (ENSRFEG00010010237) #16	ENSRFEG00010010520 #17	SLC22A9 (ENSRFEG00010010675) #18	SLC22A8 (ENSRFEG00010010746) #19	SLC22A6 (ENSRFEG00010011255) #20	ENSRFEG00010011298 #21	CHRM1 (ENSRFEG00010011318) #22	SLC3A2 (ENSRFEG00010011338) #23	WDR74 (ENSRFEG00010011575)	STX5 (ENSRFEG00010011935)	NXF1 (ENSRFEG00010012033)	TMEM223 (ENSRFEG00010012090)	TMEM179B (ENSRFEG00010012153)	TAF6L (ENSRFEG00010012295)	POLR2G (ENSRFEG00010012342)	ZBTB3 (ENSRFEG00010012397)	TTC9C (ENSRFEG00010012416)	HNRNPUL2 (ENSRFEG00010012436)	GNG3 (ENSRFEG00010012628)	BSCL2 (ENSRFEG00010012669)	LRRN4CL (ENSRFEG00010012818)	UBXN1 (ENSRFEG00010012842)
Equus	ANCESTRAL SPECIES	11	ENSGT00940000154853.d #12	ENSGT00940000154853.c #14	ENSGT00940000162878.c.a.a #15	ENSGT00940000162878.c.b #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239.n.b #18	ENSGT00940000161239.m.a #18	ENSGT00940000161239.m.b #18	ENSGT00940000161239.n.a #18	ENSGT00940000163667	ENSGT00940000164763	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b.b #20	ENSGT00940000157004.a.b.a #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT00700000106100	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486.a	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Donkey	MODERN SPECIES	8	ENSEASG00005030403 #15	ENSEASG00005020110 #15	ENSEASG00005031505 #14	ENSEASG00005020101 #15	LGALS12 (ENSEASG00005026393) #16	ENSEASG00005012059 #17	ENSEASG00005037448 #18	ENSEASG00005037691 #18	ENSEASG00005029445 #18	ENSEASG00005038155 #18	ENSEASG00005011472	SLC22A24 (ENSEASG00005011428)	SLC22A8 (ENSEASG00005011414) #19	SLC22A6 (ENSEASG00005011412) #20	ENSEASG00005011406 #20	CHRM1 (ENSEASG00005035508) #22	SLC3A2 (ENSEASG00005011398) #23	WDR74 (ENSEASG00005011378)	STX5 (ENSEASG00005011371)	NXF1 (ENSEASG00005011368)	TMEM223 (ENSEASG00005024604)	TMEM179B (ENSEASG00005011364)	TAF6L (ENSEASG00005011361)	POLR2G (ENSEASG00005011357)	ENSEASG00005011353	ENSEASG00005029535	HNRNPUL2 (ENSEASG00005011347)	GNG3 (ENSEASG00005026313)	BSCL2 (ENSEASG00005011244)	LRRN4CL (ENSEASG00005025754)	UBXN1 (ENSEASG00005011185)
Horse	MODERN SPECIES	3	ENSECAG00000038997 #14	ENSECAG00000032959 #15	LGALS12 (ENSECAG00000019637) #16	PLAAT5 (ENSECAG00000019603) #17	ENSECAG00000049087 #18	ENSECAG00000030790 #18	ENSECAG00000055620	ENSECAG00000054899 #18	SLC22A10 (ENSECAG00000014789)	SLC22A24 (ENSECAG00000013637)	ENSECAG00000018908 #18	SLC22A8 (ENSECAG00000012673) #19	SLC22A6 (ENSECAG00000010602) #20	ENSECAG00000034010 #20	SLC3A2 (ENSECAG00000009822) #23	CHRM1 (ENSECAG00000005493) #22	WDR74 (ENSECAG00000009091)	TEX54 (ENSECAG00000028010)	STX5 (ENSECAG00000008632)	NXF1 (ENSECAG00000001426)	TMEM223 (ENSECAG00000001265)	TMEM179B (ENSECAG00000001075)	TAF6L (ENSECAG00000021482)	POLR2G (ENSECAG00000021465)	ZBTB3 (ENSECAG00000021457)	ENSECAG00000050506	HNRNPUL2 (ENSECAG00000020298)	GNG3 (ENSECAG00000012185)	BSCL2 (ENSECAG00000018657)	LRRN4CL (ENSECAG00000005381)	UBXN1 (ENSECAG00000017404)
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT00390000006255.b.b	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482.d #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162878 #15	ENSGT00940000161499 #16	ENSGT00940000162436 #17	ENSGT00940000161239 #18	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589.h	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639.d	ENSGT00940000162696	ENSGT00940000156457
Afrotheria	ANCESTRAL SPECIES																	ENSGT00940000162301 #22
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00940000162301 #22
Hyrax	MODERN SPECIES	7898																CHRM1 (ENSPCAG00000014119) #22
Xenarthra	ANCESTRAL SPECIES	58														ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.i.a	ENSGT00390000012589.h	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639.d	ENSGT00940000162696	ENSGT00940000156457	ENSGT00390000001930
Armadillo	MODERN SPECIES	576													ENSDNOG00000034059 #20	SLC22A8 (ENSDNOG00000040520) #19	ENSDNOG00000035908 #20	CHRM1 (ENSDNOG00000033696) #22	SLC3A2 (ENSDNOG00000035768) #23	WDR74 (ENSDNOG00000043582)	ENSDNOG00000005008	NXF1 (ENSDNOG00000024303)	TMEM223 (ENSDNOG00000003066)	TMEM179B (ENSDNOG00000045983)	ENSDNOG00000031631	POLR2G (ENSDNOG00000043426)	ENSDNOG00000012208	ENSDNOG00000043011	TTC9C (ENSDNOG00000006523)	HNRNPUL2 (ENSDNOG00000006508)	GNG3 (ENSDNOG00000006502)	BSCL2 (ENSDNOG00000045976)	UBXN1 (ENSDNOG00000002776)
Marsupialia	ANCESTRAL SPECIES	12	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162660.b.e.b.g.a	ENSGT00940000161499 #16	ENSGT00940000157004.a.a.e.b ##20	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00970000198388	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.g	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00950000183059.a	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Marsupialia_b	ANCESTRAL SPECIES	15	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162660.b.e.b.g.a	ENSGT00940000161499 #16	ENSGT00940000157004.a.a.e.b ##20	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00970000198388	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.g	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00950000183059.a	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696
Diprotodontia	ANCESTRAL SPECIES	26	ENSGT00390000014903	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162660.b.e.b.g.a	ENSGT00940000161499 #16	ENSGT00940000157004.a.a.e.b ##20	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00970000198388	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.g	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Diprotodontia_a	ANCESTRAL SPECIES	15	ENSGT00940000154196.a	ENSGT00940000155031	ENSGT00410000025985 #7	ENSGT00600000084617 #8	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853.d #12	ENSGT00940000162660.b.e.b.g.a	ENSGT00940000162660.b.e.a	ENSGT00940000161499 #16	ENSGT00940000157004.a.a.e.b ##20	ENSGT00940000154901.C.b.e #19	ENSGT00940000157004.a.b #20	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00970000198388	ENSGT00940000162301 #22	ENSGT00940000156646 #23	ENSGT00390000015119	ENSGT01000000214440.C	ENSGT00390000007539.g	ENSGT00390000012589	ENSGT00510000048151	ENSGT00640000091486.a	ENSGT00390000008975	ENSGT00940000161486	ENSGT00940000161805	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000162696	ENSGT00940000156457
Common wonbat	MODERN SPECIES	901												SLC22A8 (ENSVURG00010000539) #19	SLC22A6 (ENSVURG00010000773) #20	ENSVURG00010000838 ##19	ENSVURG00010001279	CHRM1 (ENSVURG00010001286) #22	SLC3A2 (ENSVURG00010001296) #23	WDR74 (ENSVURG00010001367)	STX5 (ENSVURG00010001407)	ENSVURG00010001446	TMEM223 (ENSVURG00010001486)	TMEM179B (ENSVURG00010001496)	TAF6L (ENSVURG00010001513)	POLR2G (ENSVURG00010001531)	TTC9C (ENSVURG00010001583)	ENSVURG00010001618	GNG3 (ENSVURG00010001979)	ENSVURG00010001984	ENSVURG00010001988	UBXN1 (ENSVURG00010002011)	ENSVURG00010002083
koala	MODERN SPECIES	179	RCOR2 (ENSPCIG00000015584)	MARK2 (ENSPCIG00000015578)	SPINDOC (ENSPCIG00000015574) #7	ZFTA (ENSPCIG00000015569) #8	ENSPCIG00000015561 #9	ATL3 (ENSPCIG00000015551) #11	PLAAT3 (ENSPCIG00000031587) #12	ENSPCIG00000015546	ENSPCIG00000015542	LGALS12 (ENSPCIG00000015539) #16	ENSPCIG00000015537 ##20	SLC22A8 (ENSPCIG00000015222) #19	SLC22A6 (ENSPCIG00000015223) #20	ENSPCIG00000017646 ##19	ENSPCIG00000017645	CHRM1 (ENSPCIG00000017643) #22	SLC3A2 (ENSPCIG00000018245) #23	WDR74 (ENSPCIG00000018719)	STX5 (ENSPCIG00000018721)	ENSPCIG00000015226	TMEM223 (ENSPCIG00000015231)	TMEM179B (ENSPCIG00000015233)	TAF6L (ENSPCIG00000015237)	ENSPCIG00000036190	POLR2G (ENSPCIG00000015245)	ZBTB3 (ENSPCIG00000015249)	TTC9C (ENSPCIG00000015251)	HNRNPUL2 (ENSPCIG00000015254)	GNG3 (ENSPCIG00000015258)	ENSPCIG00000015262	ENSPCIG00000015265
Wallaby	MODERN SPECIES	11540																CHRM1 (ENSMEUG00000003546) #22	SLC3A2 (ENSMEUG00000003536) #23
Tasmanian devil	MODERN SPECIES	5	ENSSHAG00000004812	MARK2 (ENSSHAG00000005716)	RCOR2 (ENSSHAG00000020586)	SPINDOC (ENSSHAG00000006662) #7	ZFTA (ENSSHAG00000022871) #8	ENSSHAG00000021781 #9	ATL3 (ENSSHAG00000002162) #11	ENSSHAG00000020987 #12	ENSSHAG00000022686	LGALS12 (ENSSHAG00000004703) #16	ENSSHAG00000005173 ##20	ENSSHAG00000032003	SLC22A8 (ENSSHAG00000006603) #19	SLC22A6 (ENSSHAG00000007804) #20	ENSSHAG00000022689 ##19	CHRM1 (ENSSHAG00000021922) #22	ENSSHAG00000022006	SLC3A2 (ENSSHAG00000007209) #23	STX5 (ENSSHAG00000024697)	WDR74 (ENSSHAG00000026668)	ENSSHAG00000006407	TMEM223 (ENSSHAG00000025382)	TMEM179B (ENSSHAG00000006311)	TAF6L (ENSSHAG00000031966)	POLR2G (ENSSHAG00000006006)	ENSSHAG00000005891	ZBTB3 (ENSSHAG00000029780)	HNRNPUL2 (ENSSHAG00000005445)	GNG3 (ENSSHAG00000031455)	UBXN1 (ENSSHAG00000029413)	ENSSHAG00000004657
Opossum	MODERN SPECIES	4	ENSMODG00000043944	ENSMODG00000041851	ENSMODG00000008826	ENSMODG00000008821	MARK2 (ENSMODG00000008796)	SPINDOC (ENSMODG00000025552) #7	ENSMODG00000008519 #9	ENSMODG00000008485 #11	ENSMODG00000037909	ENSMODG00000028381 #16	ENSMODG00000008374 ##20	ENSMODG00000038980 ##20	SLC22A6 (ENSMODG00000008309) #20	SLC22A8 (ENSMODG00000036916) ##19	ENSMODG00000049907	CHRM1 (ENSMODG00000008164) #22	SLC3A2 (ENSMODG00000008156) #23	WDR74 (ENSMODG00000008120)	ENSMODG00000008085	TMEM223 (ENSMODG00000008008)	TMEM179B (ENSMODG00000008003)	TAF6L (ENSMODG00000007998)	POLR2G (ENSMODG00000007984)	ENSMODG00000045532	ENSMODG00000040142	ENSMODG00000005789	ZBTB3 (ENSMODG00000007952)	TTC9C (ENSMODG00000007947)	GNG3 (ENSMODG00000007929)	HNRNPUL2 (ENSMODG00000007941)	BSCL2 (ENSMODG00000007922)
Sauria	ANCESTRAL SPECIES	40											ENSGT00940000154901.C.b.f.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000162438	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253	ENSGT00390000007479	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a.b	ENSGT00940000162464	ENSGT00390000001738	ENSGT00390000009753	ENSGT01070000254712
Lepidosauria	ANCESTRAL SPECIES	87	ENSGT00390000007335	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000162343	ENSGT00940000166023	ENSGT00940000163054.b	ENSGT00530000064721	ENSGT00940000161363	ENSGT00940000154901.C.b.f.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000162438	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743
Episquamata	ANCESTRAL SPECIES	19	ENSGT00390000005232	ENSGT00390000007335	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000162343	ENSGT00940000166023	ENSGT00530000064721	ENSGT00940000161363	ENSGT00940000154901.C.b.f.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000162438	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT01100000263573.b.b	ENSGT01030000234540.C	ENSGT00940000161712.a	ENSGT00940000161712.b	ENSGT00730000111174	ENSGT00940000158886	ENSGT00940000160444	ENSGT00940000169892
Laterata	ANCESTRAL SPECIES	62	ENSGT00390000007335	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00940000154556	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000163054.b	ENSGT00960000189006	ENSGT00530000064721	ENSGT00940000161363	ENSGT00940000154901.C.b.f.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000162438
Common wall lizard	MODERN SPECIES	7	CCDC85B (ENSPMRG00000015226)	FIBP (ENSPMRG00000015231)	EFEMP2 (ENSPMRG00000015236)	MUS81 (ENSPMRG00000015240)	ENSPMRG00000015247	ENSPMRG00000015252	CFL1 (ENSPMRG00000015255)	CD248 (ENSPMRG00000015263)	AP5B1 (ENSPMRG00000015266)	OVOL1 (ENSPMRG00000015270)	ENSPMRG00000015277 ##19	ENSPMRG00000015281 ##19	ENSPMRG00000015284 ##19	ENSPMRG00000015298 ##19	ENSPMRG00000015308 ##19	CHRM1 (ENSPMRG00000015315) #22	DPF2 (ENSPMRG00000015322)	CDC42EP2 (ENSPMRG00000015335)	POLA2 (ENSPMRG00000015344)	ENSPMRG00000015363	CDCA5 (ENSPMRG00000015393)	ZFPL1 (ENSPMRG00000015397)	VPS51 (ENSPMRG00000015399)	ENSPMRG00000015412	TM7SF2 (ENSPMRG00000015418)	ZNHIT2 (ENSPMRG00000015430)	FAU (ENSPMRG00000015437)	ENSPMRG00000015443	ENSPMRG00000015451	MAP4K2 (ENSPMRG00000015521)	SF1 (ENSPMRG00000015892)
Argentine black and white tegu	MODERN SPECIES	80	BBS1 (ENSSMRG00000020371)	DPP3 (ENSSMRG00000020370)	PELI3 (ENSSMRG00000020369)	ENSSMRG00000020368	DRAP1 (ENSSMRG00000020367)	C11orf68 (ENSSMRG00000020366)	ENSSMRG00000020365	RELA (ENSSMRG00000020364)	ENSSMRG00000020363	AP5B1 (ENSSMRG00000020362)	OVOL1 (ENSSMRG00000020361)	ENSSMRG00000020360 ##19	ENSSMRG00000020359 ##19	ENSSMRG00000020358 ##19	ENSSMRG00000020357 ##19	CHRM1 (ENSSMRG00000020355) #22	DPF2 (ENSSMRG00000020354)	POLA2 (ENSSMRG00000020352)	RBM14 (ENSSMRG00000020351)	CCS (ENSSMRG00000020350)	ENSSMRG00000020349	ENSSMRG00000020348	SPTBN2 (ENSSMRG00000020347)	ENSSMRG00000020346	RCE1 (ENSSMRG00000020343)	ACTN3 (ENSSMRG00000020342)	ENSSMRG00000020340	SF3B2 (ENSSMRG00000020336)	GAL3ST3 (ENSSMRG00000020335)	ENSSMRG00000020334	MRPL11 (ENSSMRG00000020329)
Toxicofera	ANCESTRAL SPECIES	28	ENSGT00390000005232	ENSGT00390000007335	ENSGT00950000183050.b.b.b.a.b.b	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000162343	ENSGT00940000166023	ENSGT00530000064721	ENSGT00940000161363	ENSGT00940000154901.C.b.f.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784.l	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT01030000234540.C	ENSGT00940000161712.a	ENSGT00940000161712.b	ENSGT00730000111174	ENSGT00940000158886	ENSGT00940000160444	ENSGT00940000169892	ENSGT00940000165064	ENSGT00940000161329
Lizard	MODERN SPECIES	2086																ENSACAG00000010234 #22	ENSACAG00000035502
Archelosauria	ANCESTRAL SPECIES	38											ENSGT00940000154901.C.b.f.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253	ENSGT00390000007479	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a.b	ENSGT00940000162464	ENSGT00390000001738	ENSGT00390000009753	ENSGT00390000010028	ENSGT01030000234598.b.b
Cryptodira	ANCESTRAL SPECIES	17	ENSGT00950000185472	ENSGT00600000084617 #8	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853 #12	ENSGT00940000162660.b.e.a.b	ENSGT00940000162660.b.e.a.a	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.f	ENSGT00940000161499 #16	ENSGT00940000154901.C.b.f.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000159147	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253	ENSGT00390000007479	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a.b	ENSGT00940000162464	ENSGT00390000001738	ENSGT00390000009753	ENSGT00390000010028	ENSGT01030000234598.b.b
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00600000084617 #8	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853.a #12	ENSGT00940000162660.b.e.a.b	ENSGT00940000154853.b #12	ENSGT00940000162660.b.e.a.a	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.f	ENSGT00940000161499 #16	ENSGT00940000154901.C.b.f.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000159147.f	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253.o	ENSGT00390000007479	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a.b	ENSGT00940000162464	ENSGT00390000001738	ENSGT00390000009753	ENSGT00390000010028.d	ENSGT01030000234598.b.b
Emydidae	ANCESTRAL SPECIES	13	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853.a #12	ENSGT00940000162660.b.e.a.b	ENSGT00940000162660.b.e.a.a	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.f	ENSGT00940000161499 #16	ENSGT00940000154901.C.b.f.b.a.a.i.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.a.a.i.b ##19	ENSGT00940000154901.C.b.f.b.a.a.j ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000159147.f	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253.o	ENSGT00390000007479	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a.b	ENSGT00940000162464	ENSGT00390000001738	ENSGT00390000009753	ENSGT00390000010028.c	ENSGT01030000234598.b.b
Three-toed box turtle	MODERN SPECIES	33	ENSTMTG00000002131	ENSTMTG00000002140	ZFTA (ENSTMTG00000002149) #8	ENSTMTG00000002155 #9	ATL3 (ENSTMTG00000002166) #11	ENSTMTG00000002174 #12	ENSTMTG00000002196	ENSTMTG00000002243	ENSTMTG00000002253	ENSTMTG00000002262	LGALS12 (ENSTMTG00000002278) #16	ENSTMTG00000002287 ##19	ENSTMTG00000002299 ##19	ENSTMTG00000002322 ##19	ENSTMTG00000002391 ##19	CHRM1 (ENSTMTG00000002487) #22	DPF2 (ENSTMTG00000002493)	CDC42EP2 (ENSTMTG00000002496)	POLA2 (ENSTMTG00000002499)	CAPN1 (ENSTMTG00000002515)	SPDYC (ENSTMTG00000002540)	SYVN1 (ENSTMTG00000002548)	ENSTMTG00000002555	MRPL49 (ENSTMTG00000002564)	FAU (ENSTMTG00000002567)	ZNHIT2 (ENSTMTG00000002573)	TM7SF2 (ENSTMTG00000002585)	ENSTMTG00000002591	VPS51 (ENSTMTG00000002597)	ZFPL1 (ENSTMTG00000002607)	ENSTMTG00000002612
painted turtle	MODERN SPECIES	2386	ENSCPBG00000023535	ENSCPBG00000023537	ENSCPBG00000023542	LGALS12 (ENSCPBG00000023548) #16	ENSCPBG00000023549 ##19	ENSCPBG00000023553 ##19	ENSCPBG00000023557 ##19	ENSCPBG00000023560 ##19	ENSCPBG00000023582 ##19	ENSCPBG00000023584 ##19	ENSCPBG00000023590 ##19	ENSCPBG00000023602 ##19	ENSCPBG00000023604 ##19	ENSCPBG00000023608 ##19	DPF2 (ENSCPBG00000023614)	CHRM1 (ENSCPBG00000023618) #22	POLA2 (ENSCPBG00000023619)	CAPN1 (ENSCPBG00000023622)	SPDYC (ENSCPBG00000023629)	SYVN1 (ENSCPBG00000023630)	ENSCPBG00000023634	ENSCPBG00000023636	FAU (ENSCPBG00000023637)	ZNHIT2 (ENSCPBG00000023638)	TM7SF2 (ENSCPBG00000023641)	ENSCPBG00000023643	VPS51 (ENSCPBG00000023645)	ZFPL1 (ENSCPBG00000023648)	CDCA5 (ENSCPBG00000023649)	NAALADL1 (ENSCPBG00000023654)	ENSCPBG00000023657
Testudinidae	ANCESTRAL SPECIES	5	ENSGT00600000084617 #8	ENSGT00940000157482 #9	ENSGT00940000158566 #11	ENSGT00940000154853.a #12	ENSGT00940000162660.b.e.a.b	ENSGT00940000154853.b #12	ENSGT00940000162660.b.e.a.a	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.f	ENSGT00940000161499 #16	ENSGT00940000154901.C.b.f.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.a ##19	ENSGT00940000154901.C.b.f.b.b.a.b ##19	ENSGT00940000154901.C.b.f.b.b.b ##19	ENSGT00940000154901.C.b.f.b.a.b ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000159147.f	ENSGT00940000154524.a	ENSGT00940000157743	ENSGT00390000017253.o	ENSGT00390000007479.`b	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a.b	ENSGT00940000162464	ENSGT00390000001738	ENSGT00390000009753	ENSGT00390000010028.d	ENSGT01030000234598.b.b
Abingdon island giant tortoise	MODERN SPECIES	2278	ENSCABG00000000737 #9	ATL3 (ENSCABG00000000739) #11	ENSCABG00000000740 #12	ENSCABG00000000743	ENSCABG00000000745	ENSCABG00000000747	ENSCABG00000000756	ENSCABG00000000809	LGALS12 (ENSCABG00000000816) #16	ENSCABG00000000918	ENSCABG00000000934 ##19	ENSCABG00000001060 ##19	ENSCABG00000001301 ##19	ENSCABG00000001338 ##19	ENSCABG00000001482 ##19	CHRM1 (ENSCABG00000001601) #22	DPF2 (ENSCABG00000001614)	CDC42EP2 (ENSCABG00000001686)	POLA2 (ENSCABG00000001701)	CAPN1 (ENSCABG00000001957)	SPDYC (ENSCABG00000002961)	SYVN1 (ENSCABG00000002965)	ENSCABG00000002969	MRPL49 (ENSCABG00000002973)	FAU (ENSCABG00000002974)	ZNHIT2 (ENSCABG00000002976)	TM7SF2 (ENSCABG00000002977)
Goode s thornscrub tortoise	MODERN SPECIES	21	ENSGEVG00005011885	ZFTA (ENSGEVG00005011808) #8	ENSGEVG00005011707 #9	ATL3 (ENSGEVG00005011679) #11	ENSGEVG00005011654 #12	ENSGEVG00005011526 #12	ENSGEVG00005011491 #12	ENSGEVG00005011390	ENSGEVG00005011291	ENSGEVG00005011225	LGALS12 (ENSGEVG00005011151) #16	ENSGEVG00005010707 ##19	ENSGEVG00005010042 ##19	ENSGEVG00005009473 ##19	ENSGEVG00005008720 ##19	CHRM1 (ENSGEVG00005008602) #22	DPF2 (ENSGEVG00005008558)	CDC42EP2 (ENSGEVG00005008521)	POLA2 (ENSGEVG00005008496)	CAPN1 (ENSGEVG00005008420)	SPDYC (ENSGEVG00005008396)	SYVN1 (ENSGEVG00005008363)	ENSGEVG00005008319	MRPL49 (ENSGEVG00005008293)	ENSGEVG00005008268	ZNHIT2 (ENSGEVG00005008244)	TM7SF2 (ENSGEVG00005008228)	ENSGEVG00005008211	VPS51 (ENSGEVG00005008186)	ZFPL1 (ENSGEVG00005008161)	ENSGEVG00005008136
Chinese turtle	MODERN SPECIES	2112										LGALS12 (ENSPSIG00000012610) #16	ENSPSIG00000012542 ##19	ENSPSIG00000012508 ##19	ENSPSIG00000012485 ##19	ENSPSIG00000011590 ##19	ENSPSIG00000011491 ##19	CHRM1 (ENSPSIG00000000656) #22	DPF2 (ENSPSIG00000010805)	CDC42EP2 (ENSPSIG00000000649)	POLA2 (ENSPSIG00000010575)	CAPN1 (ENSPSIG00000008053)	SPDYC (ENSPSIG00000007826)	SYVN1 (ENSPSIG00000006560)	ENSPSIG00000006533	FAU (ENSPSIG00000006273)	ZNHIT2 (ENSPSIG00000006244)	TM7SF2 (ENSPSIG00000006053)	VPS51 (ENSPSIG00000005609)	ZFPL1 (ENSPSIG00000005590)	CDCA5 (ENSPSIG00000005587)	NAALADL1 (ENSPSIG00000015629)	SAC3D1 (ENSPSIG00000015519)
Anura	ANCESTRAL SPECIES	211															ENSGT00940000154901.C.a.b.a ##19	ENSGT00940000162301 #22	ENSGT00940000155070	ENSGT00940000161776	ENSGT00390000016784	ENSGT00940000154901.C.a.a.b ##19	ENSGT00940000159147	ENSGT00940000154524.a.m	ENSGT00940000157743	ENSGT00940000168631	ENSGT00390000017253	ENSGT00390000007479	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a	ENSGT00940000162464
Frog	MODERN SPECIES	4	cdc42ep2 (ENSXETG00000023288)	eps8l2 (ENSXETG00000032637)	deaf1 (ENSXETG00000033517)	tmem80 (ENSXETG00000035276)	drd4 (ENSXETG00000036892)	cdhr5 (ENSXETG00000033148)	ENSXETG00000038983	zfp36l2.1 (ENSXETG00000023255)	zfp36l2.2 (ENSXETG00000023254)	kcne2 (ENSXETG00000047008)	plaat4 (ENSXETG00000029956)	plaat3 (ENSXETG00000038318)	lgals12 (ENSXETG00000043284)	slc22a8 (ENSXETG00000026214) ##19	ENSXETG00000048026	chrm1 (ENSXETG00000037602) #22	dpf2 (ENSXETG00000041314)	taldo1 (ENSXETG00000001671)	ENSXETG00000036077	naaladl1 (ENSXETG00000030740)	ENSXETG00000045592	snx15 (ENSXETG00000045742)	arl2 (ENSXETG00000046568)	ENSXETG00000001662	ENSXETG00000036353	majin (ENSXETG00000035747)	gpha2 (ENSXETG00000036545)	ppp2r5b (ENSXETG00000001650)	ENSXETG00000001646 #19	ENSXETG00000035704 #19	atg2a (ENSXETG00000031818)
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000030446 #19	ENSLLEG00000030422 #19	ATG2A (ENSLLEG00000030367)	ENSLLEG00000030351	ENSLLEG00000030347	ENSLLEG00000030341	ENSLLEG00000030330	ENSLLEG00000030324	ENSLLEG00000030317	ENSLLEG00000030309 #16	ENSLLEG00000030300	ENSLLEG00000030287	ENSLLEG00000030281 ##19	ENSLLEG00000030270	ENSLLEG00000030255 ##19	CHRM1 (ENSLLEG00000030251) #22	DPF2 (ENSLLEG00000030191)	CDC42EP2 (ENSLLEG00000030167)	ENSLLEG00000030157	ENSLLEG00000030153	ENSLLEG00000030096	ENSLLEG00000028827 ##19	ENSLLEG00000024059 ##19	ENSLLEG00000021794 ##19	CAPN1 (ENSLLEG00000021343)	SPDYC (ENSLLEG00000021138)	SYVN1 (ENSLLEG00000029889)	ENSLLEG00000029848	MRPL49 (ENSLLEG00000029792)	ENSLLEG00000029779	ZNHIT2 (ENSLLEG00000029769)
Actinopterygii	ANCESTRAL SPECIES	650																ENSGT00940000162301 #22	ENSGT00940000155070.a.b	ENSGT00940000161776	ENSGT00390000016784
Neopterygii	ANCESTRAL SPECIES	466															ENSGT01030000234532.A.a.a.a	ENSGT00940000162301 #22	ENSGT00940000155070.a.b	ENSGT00940000161776	ENSGT00390000016784
Osteoglossocephalai	ANCESTRAL SPECIES	130	ENSGT00390000015119	ENSGT00950000182834.A.a.b.d	ENSGT01030000234773	ENSGT00940000174023	ENSGT00390000007479	ENSGT00390000017253	ENSGT00390000017147	ENSGT00390000000417.a.a.b.a.a	ENSGT00390000001738	ENSGT00530000063721.B	ENSGT00940000161002	ENSGT00940000159139.b.a	ENSGT00940000162552.b	ENSGT00940000160644	ENSGT01030000234532.A.a.a.a.a.a	ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a	ENSGT00940000155070.a.b.b	ENSGT00940000161776	ENSGT00940000158847.d	ENSGT00940000160285	ENSGT01100000263491.a.b.a.a.b.b.b	ENSGT00940000157557	ENSGT00390000010687.a.b	ENSGT00940000160039	ENSGT01040000240539.a	ENSGT00940000159971	ENSGT00940000159450	ENSGT00530000063484.b.a	ENSGT00940000154895.a.b	ENSGT00940000156128.b
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	15	ENSGT00940000167667	ENSGT00940000156288.a.g	ENSGT00940000154508.a.b	ENSGT00390000009391.b	ENSGT00940000158124.g	ENSGT00940000158076.a	ENSGT00440000037499.d	ENSGT00950000182869.e.a.b.a	ENSGT00940000159831.d	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00940000159375.c.a	ENSGT00940000162391.j	ENSGT00940000160644.a	ENSGT01030000234532.A.a.a.a.a.a	ENSGT00940000162301.a #22	ENSGT00940000155070.a.b.b	ENSGT00940000161776.b	ENSGT00940000158847.d.c	ENSGT00940000160285.`b	ENSGT01100000263491.a.b.a.a.b.b.b	ENSGT00940000162696.d	ENSGT00940000154359.w	ENSGT00940000157557.d	ENSGT00940000178670	ENSGT00940000160039.k	ENSGT00940000159971.e	ENSGT00940000154895.a.b.c	ENSGT00940000156128.b.d	ENSGT00950000182988.a.b.b.b.o	ENSGT00940000158195
Asian bonytongue	MODERN SPECIES	19	ENSSFOG00015001976	ENSSFOG00015028792	fstl4 (ENSSFOG00015001997)	ENSSFOG00015002055	vdac1 (ENSSFOG00015002081)	tcf7 (ENSSFOG00015030688)	SKP1 (ENSSFOG00015002226)	ppp2cab (ENSSFOG00015002249)	ube2b (ENSSFOG00015031211)	ENSSFOG00015002334	rom1a (ENSSFOG00015002344)	FLRT1 (ENSSFOG00015002369)	ENSSFOG00015002376	SIPA1 (ENSSFOG00015002393)	ENSSFOG00015002431	CHRM1 (ENSSFOG00015029971) #22	dpf2 (ENSSFOG00015002492)	cdc42ep2 (ENSSFOG00015002548)	SPTBN2 (ENSSFOG00015002579)	LTBP3 (ENSSFOG00015002755)	ENSSFOG00015028215	ENSSFOG00015030105	ENSSFOG00015002852	WDR44 (ENSSFOG00015002865)	LRCH2 (ENSSFOG00015029947)	il13ra2 (ENSSFOG00015002955)	ENSSFOG00015024436	SLC16A2 (ENSSFOG00015002967)	ENSSFOG00015032629	ENSSFOG00015002994	ENSSFOG00015003024
P. kingsleyae	MODERN SPECIES	71	fnip1 (ENSPKIG00000004108)	ENSPKIG00000004226	fstl4 (ENSPKIG00000004293)	C5orf15 (ENSPKIG00000004390)	vdac1 (ENSPKIG00000004438)	ENSPKIG00000004534	tcf7 (ENSPKIG00000004591)	skp1 (ENSPKIG00000004682)	ppp2cab (ENSPKIG00000004706)	ube2b (ENSPKIG00000004732)	rom1a (ENSPKIG00000004771)	FLRT1 (ENSPKIG00000004787)	ENSPKIG00000004793	SIPA1 (ENSPKIG00000004807)	ENSPKIG00000004846	CHRM1 (ENSPKIG00000004905) #22	dpf2 (ENSPKIG00000004967)	cdc42ep2 (ENSPKIG00000005041)	SPTBN2 (ENSPKIG00000005153)	LTBP3 (ENSPKIG00000005539)	ENSPKIG00000005657	ENSPKIG00000005681	ENSPKIG00000005723	ENSPKIG00000005731	ENSPKIG00000005745	spag7 (ENSPKIG00000005781)	slc25a11 (ENSPKIG00000005819)	KCNAB3 (ENSPKIG00000005861)	psmb6 (ENSPKIG00000005887)	KIF1C (ENSPKIG00000005926)	CAMTA2 (ENSPKIG00000006045)
Osteoglossiformes	ANCESTRAL SPECIES	22	ENSGT00940000161083	ENSGT00940000161450	ENSGT00940000159375.c.b	ENSGT00940000154911	ENSGT00390000013444.a.b.b.a	ENSGT00390000002731	ENSGT00940000161486	ENSGT00940000163054	ENSGT00940000166023	ENSGT00940000155999.f	ENSGT00940000164006	ENSGT00940000162552.b	ENSGT00940000160644.b	ENSGT01030000234532.A.a.a.b.k	ENSGT01030000234532.A.a.a.a.a.b	ENSGT00940000162301.b #22	ENSGT00940000155070.a.b.a	ENSGT00940000161776.a	ENSGT00390000016784	ENSGT00390000009327	ENSGT00940000164891	ENSGT00940000158847.d.d
P. kingsleyae	MODERN SPECIES	39	ENSPKIG00000019650	GJB1 (ENSPKIG00000019632)	gja2 (ENSPKIG00000019622)	ENSPKIG00000019563	vma21 (ENSPKIG00000019523)	mtnr1c (ENSPKIG00000019499)	ENSPKIG00000019475	ENSPKIG00000019454	kat5b (ENSPKIG00000019383)	rnaseh2c (ENSPKIG00000019331)	foxa (ENSPKIG00000019301)	zdhhc24 (ENSPKIG00000019276)	ENSPKIG00000019257	ENSPKIG00000019224	ENSPKIG00000019190	CHRM1 (ENSPKIG00000019172) #22	DPF2 (ENSPKIG00000019113)	cdc42ep2 (ENSPKIG00000019081)	pola2 (ENSPKIG00000019005)	ENSPKIG00000018930	ENSPKIG00000018911	SPTBN2 (ENSPKIG00000018604)	ENSPKIG00000018409	ENSPKIG00000018372	LTBP3 (ENSPKIG00000018275)	ENSPKIG00000018231	ENSPKIG00000018160	WDR44 (ENSPKIG00000018027)	zgc:163098 (ENSPKIG00000017920)	ENSPKIG00000017836	ENSPKIG00000017783
Clupeocephala	ANCESTRAL SPECIES	87	ENSGT00390000008374	ENSGT00940000162660.b.b.a	ENSGT00930000151054	ENSGT00940000167701.a	ENSGT00940000159921.d	ENSGT00940000165784	ENSGT00940000159375.c.b	ENSGT00940000161450	ENSGT00390000013444.a.b.b.b	ENSGT00390000002731	ENSGT00940000161486	ENSGT00940000166023	ENSGT00940000155999.f	ENSGT00940000164006	ENSGT01030000234532.A.a.a.a.a.b	ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a	ENSGT00390000016784	ENSGT00390000009327	ENSGT00940000161394
Otomorpha	ANCESTRAL SPECIES	221																ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a	ENSGT00390000016784	ENSGT00390000009327	ENSGT00940000161394	ENSGT01030000234566.e.b.a.b.c.a	ENSGT00940000164327.b	ENSGT00390000007135	ENSGT00500000044831.a.a.b	ENSGT00940000158850	ENSGT00940000154444.B	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT01060000248750
Otophysi	ANCESTRAL SPECIES	43																ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a	ENSGT00940000154808.a.b.j.a	ENSGT00940000157891	ENSGT00950000183033.a.b.b	ENSGT00390000000618	ENSGT00940000159322	ENSGT00950000183088.a.a	ENSGT00950000183137.b.b	ENSGT00940000156471.b	ENSGT01100000263544.c.a.a.a	ENSGT00940000155983.a.a	ENSGT00940000153322.B.d.a	ENSGT01030000235165	ENSGT00940000153899.a.a	ENSGT00980000198740
Characiphysae	ANCESTRAL SPECIES	7	ENSGT00940000162660.b.b.a	ENSGT00930000151054	ENSGT00940000167701.a	ENSGT00940000159921.d	ENSGT00940000165784	ENSGT00940000159375.c.b	ENSGT00940000161450	ENSGT00390000013444.a.b.b.b	ENSGT00390000002731	ENSGT00940000164681	ENSGT00390000011180	ENSGT00940000164878.a	ENSGT00940000158778.d	ENSGT00950000183162.a.a.d	ENSGT00940000159674	ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a	ENSGT00940000165646.B	ENSGT00940000154808.a.b.j.a	ENSGT00940000157891	ENSGT00950000183033.a.b.b	ENSGT00390000000618	ENSGT00940000159322	ENSGT00950000183088.a.a	ENSGT00950000183137.b.b	ENSGT00940000156471.b	ENSGT01100000263544.c.a.a.a	ENSGT00940000155983.a.a	ENSGT00940000153322.B.d.a	ENSGT01030000235165	ENSGT00940000153899.a.a
Characiphysae_b	ANCESTRAL SPECIES	7	ENSGT00940000162660.b.b.a	ENSGT00930000151054	ENSGT00940000167701.a	ENSGT00940000159921.d	ENSGT00940000165784	ENSGT00940000161450	ENSGT00940000159375.c.b	ENSGT00390000013444.a.b.b.b	ENSGT00390000002731	ENSGT00940000164681	ENSGT00390000011180	ENSGT00940000164878.a	ENSGT00940000158778.d	ENSGT00950000183162.a.a.d	ENSGT00940000159674	ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a	ENSGT00940000154808.a.b.j.a	ENSGT00940000157891	ENSGT00950000183033.a.b.b	ENSGT00390000000618	ENSGT00940000159322	ENSGT00950000183088.a.a	ENSGT00950000183137.b.b	ENSGT00940000156471.b	ENSGT01100000263544.c.a.a.a	ENSGT00940000155983.a.a	ENSGT00940000153322.B.d.a	ENSGT01030000235165	ENSGT00940000153899.a.a	ENSGT00510000048167.b.b
Characoidei	ANCESTRAL SPECIES	2	ENSGT00940000162660.b.b.a	ENSGT00930000151054	ENSGT00940000167701.a	ENSGT00940000159921.d	ENSGT00940000165784	ENSGT00940000159375.c.b	ENSGT00940000161450	ENSGT00390000013444.a.b.b.b	ENSGT00390000002731	ENSGT00940000164681	ENSGT00390000011180	ENSGT00940000164878.a	ENSGT00940000158778.d	ENSGT00950000183162.a.a.d	ENSGT00940000159674	ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a	ENSGT00940000154808.a.b.j.a	ENSGT00940000157891	ENSGT00950000183033.a.b.b	ENSGT00390000000618	ENSGT00940000159322	ENSGT00950000183088.a.a	ENSGT00950000183137.b.b	ENSGT00940000156471.b	ENSGT01100000263544.c.a.a.a	ENSGT00940000155983.a.a	ENSGT00940000153322.B.d.a	ENSGT01030000235165	ENSGT00940000153899.a.a	ENSGT00510000048167.b.b
Mexicana tetra	MODERN SPECIES	16	rarres3l (ENSAMXG00000010501)	ENSAMXG00000010505	ENSAMXG00000038577	rom1b (ENSAMXG00000035900)	ccdc88b (ENSAMXG00000010513)	FLRT1 (ENSAMXG00000024946)	macrod1 (ENSAMXG00000010525)	fermt3b (ENSAMXG00000010529)	trpt1 (ENSAMXG00000010533)	ctsf (ENSAMXG00000010535)	eif1ad (ENSAMXG00000010537)	ENSAMXG00000024947	nrg2b (ENSAMXG00000037440)	PURA (ENSAMXG00000024949)	PSD2 (ENSAMXG00000036801)	CHRM1 (ENSAMXG00000029040) #22	dpf2l (ENSAMXG00000034779)	ENSAMXG00000024951	KLHL3 (ENSAMXG00000010572)	fam13b (ENSAMXG00000010577)	cxcl14 (ENSAMXG00000030504)	slit3 (ENSAMXG00000010608)	ARHGEF37 (ENSAMXG00000010660)	ENSAMXG00000010665	pde6a (ENSAMXG00000010673)	SLC26A2 (ENSAMXG00000040557)	HTR4 (ENSAMXG00000031787)	ENSAMXG00000029033	ENSAMXG00000010681	ENSAMXG00000010682	ENSAMXG00000010685
Red-bellied piranha	MODERN SPECIES	14	GRXCR1 (ENSPNAG00000022693)	atp8a1 (ENSPNAG00000003739)	shisa3 (ENSPNAG00000022830)	BEND4 (ENSPNAG00000022834)	ENSPNAG00000022985	zgc:153018 (ENSPNAG00000023011)	ttc9c (ENSPNAG00000023022)	ENSPNAG00000023058	ENSPNAG00000023068	ehd1a (ENSPNAG00000023091)	ubxn1 (ENSPNAG00000023105)	ENSPNAG00000023116	GANAB (ENSPNAG00000023237)	INTS5 (ENSPNAG00000023251)	rarres3l (ENSPNAG00000023261)	CHRM1 (ENSPNAG00000023269) #22	dpf2l (ENSPNAG00000023318)	HNRNPA0 (ENSPNAG00000023333)	KLHL3 (ENSPNAG00000023373)	fam13b (ENSPNAG00000023431)	cxcl14 (ENSPNAG00000023529)	slit3 (ENSPNAG00000023714)	ARHGEF37 (ENSPNAG00000023761)	ENSPNAG00000023871	pde6a (ENSPNAG00000024013)	SLC26A2 (ENSPNAG00000024034)	HTR4 (ENSPNAG00000024109)	ENSPNAG00000024173	ENSPNAG00000024218	tmem216 (ENSPNAG00000024234)	ENSPNAG00000024298
Channel catfish	MODERN SPECIES	27	rarres3l (ENSIPUG00000002707)	scyl1 (ENSIPUG00000002660)	ENSIPUG00000002642	rom1 (ENSIPUG00000002635)	ccdc88b (ENSIPUG00000002599)	FLRT1 (ENSIPUG00000002586)	macrod1 (ENSIPUG00000002580)	fermt3 (ENSIPUG00000002540)	trpt1 (ENSIPUG00000002573)	Ctsf (ENSIPUG00000002485)	ENSIPUG00000002477	eif1ad (ENSIPUG00000002466)	nrg2b (ENSIPUG00000002217)	PURA (ENSIPUG00000002191)	PSD2 (ENSIPUG00000002104)	CHRM1 (ENSIPUG00000002079) #22	dpf2l (ENSIPUG00000002015)	ENSIPUG00000001991	klhl3 (ENSIPUG00000001973)	fam13b (ENSIPUG00000001891)	cxcl14 (ENSIPUG00000001869)	slit3 (ENSIPUG00000001656)	arhgef37 (ENSIPUG00000001613)	Ppargc1b (ENSIPUG00000001584)	PDE6A (ENSIPUG00000001474)	slc26a2 (ENSIPUG00000001460)	HTR4 (ENSIPUG00000001401)	ENSIPUG00000001366	tmem216 (ENSIPUG00000001353)	ENSIPUG00000001321	ENSIPUG00000001315
Cyprinoidei	ANCESTRAL SPECIES	9	ENSGT00940000156067.g.b	ENSGT00390000014316.c.b	ENSGT00390000012721.a	ENSGT00940000165035.a	ENSGT00940000156385.a	ENSGT00940000156071.a	ENSGT00940000155875	ENSGT00940000156386	ENSGT00990000209953	ENSGT00940000157037.a.d	ENSGT00940000164716.A	ENSGT00940000154998.a.b.k	ENSGT00390000005989.a.b.b	ENSGT00940000158996	ENSGT00390000014412.l	ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a	ENSGT00940000153147.a.b	ENSGT00940000154808.a.b.j.a	ENSGT00940000157891	ENSGT00950000183033.a.b.b	ENSGT00390000000618.d	ENSGT00940000159322	ENSGT00950000183088.a.a	ENSGT00950000183137.b.b	ENSGT00940000156471.b.h	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00510000048167.b.b	ENSGT00940000158129	ENSGT00950000182938.b.b.a
Cyprininae	ANCESTRAL SPECIES	268	ENSGT00990000209953.a	ENSGT00390000012721.a.j.b.b	ENSGT00940000156385.a.b	ENSGT00940000156071.a.b.a.a	ENSGT00940000156386.e.b	ENSGT00990000209953.b	ENSGT00940000157037.a.d	ENSGT00940000164716.A.a	ENSGT00940000154998.a.b.k.b	ENSGT00390000005989.a.b.b.a	ENSGT00940000164716.A.b	ENSGT00940000154998.a.b.k.a	ENSGT00390000005989.a.b.b.b	ENSGT00940000158996.h	ENSGT00390000014412.l	ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a.a	ENSGT00940000153147.a.b	ENSGT00940000157891.b	ENSGT00940000155070.a.b.a.b	ENSGT00940000154808.a.b.j.a	ENSGT00940000157891.a	ENSGT00950000183033.a.b.b.d	ENSGT00390000000618.d	ENSGT00940000159322.f
Cyprininae_a	ANCESTRAL SPECIES	104	ENSGT00390000014316.c.b	ENSGT00390000012721.a.j.b.a	ENSGT00940000156385.a.a	ENSGT00940000156071.a.b.b	ENSGT00940000156071.a.a	ENSGT00940000155875.m	ENSGT00940000156386.f	ENSGT00940000156386.e.a	ENSGT00990000209953.a	ENSGT00940000157037.a.d.a	ENSGT00940000164716.A.b	ENSGT00940000154998.a.b.k.a	ENSGT00390000005989.a.b.b.b	ENSGT00940000158996.h	ENSGT00390000014412.l	ENSGT00940000162301 #22	ENSGT00940000155070.a.b.a.b	ENSGT00940000154808.a.b.j.a	ENSGT00940000157891.a	ENSGT00950000183033.a.b.b.c	ENSGT00390000000618.c	ENSGT00940000159322.e	ENSGT00950000183088.a.a.e	ENSGT00950000183137.b.b.d	ENSGT01030000235165.a	ENSGT00940000153322.B.d.a.t	ENSGT00940000155983.a.a.d	ENSGT01100000263544.c.a.a.a.b	ENSGT00510000048167.b.b.a	ENSGT00510000048167.b.b.b	ENSGT00940000158129
Golden-line barbel	DUPLICATION
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	1159														stc2a (ENSSGRG00000022575)	nkx2.5 (ENSSGRG00000022570)	CHRM1 (ENSSGRG00000022566) #22	dpf2l (ENSSGRG00000022545)	hnrnpa0a (ENSSGRG00000022534)	KLHL3 (ENSSGRG00000022533)	fam13b (ENSSGRG00000022513)	cxcl14 (ENSSGRG00000022506)	slit3 (ENSSGRG00000021593)
Golden-line barbel	MODERN SPECIES	149						ENSSGRG00000005796	ENSSGRG00000005795	ENSSGRG00000005794	ENSSGRG00000005793	GBE1 (ENSSGRG00000005791)	INPP5K (ENSSGRG00000005784)	PITPNA (ENSSGRG00000005773)	slc43a2b (ENSSGRG00000003477)	paxbp1 (ENSSGRG00000002914)	SLC7A1 (ENSSGRG00000002307)	ENSSGRG00000002302 #22	fxyd3 (ENSSGRG00000002301)	fxyd11 (ENSSGRG00000002300)	hpn (ENSSGRG00000002292)	ENSSGRG00000002289	dnase2 (ENSSGRG00000002288)	rgl2 (ENSSGRG00000002287)	PHF1 (ENSSGRG00000002286)	SYNGAP1 (ENSSGRG00000002283)	smg5 (ENSSGRG00000001733)	PAQR6 (ENSSGRG00000001712)	ntrk1 (ENSSGRG00000001708)	ENSSGRG00000001706	ENSSGRG00000001702	rbm8a (ENSSGRG00000001665)	otud7b (ENSSGRG00000001364)
Golden-line barbel	MODERN SPECIES	249								kif3a (ENSSGRG00000022744)	il4 (ENSSGRG00000022741)	ENSSGRG00000022739	msx2a (ENSSGRG00000022738)	cpeb4a (ENSSGRG00000022676)	stc2a (ENSSGRG00000022660)	nkx2.5 (ENSSGRG00000022659)	BNIP1 (ENSSGRG00000022656)	CHRM1 (ENSSGRG00000022655) #22	dpf2l (ENSSGRG00000022654)	ENSSGRG00000022653	KLHL3 (ENSSGRG00000022454)	fam13b (ENSSGRG00000022297)	CXCL14 (ENSSGRG00000022284)	slit3 (ENSSGRG00000020690)	ENSSGRG00000020649	ENSSGRG00000020647	ENSSGRG00000020645	pde6a (ENSSGRG00000020428)	tmem216 (ENSSGRG00000020427)	ENSSGRG00000020426	ENSSGRG00000020424	ENSSGRG00000020423	HTR4 (ENSSGRG00000020419)
Common carp reference	MODERN SPECIES	20	ENSCCRG00000081068	hspa4b (ENSCCRG00000049313)	gnpda1 (ENSCCRG00000053604)	ndfip1 (ENSCCRG00000030991)	nr3c1 (ENSCCRG00000030995)	kctd16a (ENSCCRG00000011025)	ENSCCRG00000062208	ENSCCRG00000005180	il4 (ENSCCRG00000052605)	ENSCCRG00000071522	ENSCCRG00000064430	msx2a (ENSCCRG00000004546)	cpeb4a (ENSCCRG00000073615)	stc2a (ENSCCRG00000032679)	ENSCCRG00000032673	ENSCCRG00000007360 #22	dpf2l (ENSCCRG00000057318)	hnrnpa0a (ENSCCRG00000059572)	ENSCCRG00000039094	fam13b (ENSCCRG00000065847)	cxcl14 (ENSCCRG00000053197)	slit3 (ENSCCRG00000060113)	ENSCCRG00000010390	ENSCCRG00000017374	pde6a (ENSCCRG00000005589)	tmem216 (ENSCCRG00000005459)	ENSCCRG00000062998	ENSCCRG00000062068	ENSCCRG00000057818	ENSCCRG00000069703	ENSCCRG00000038255
Goldfish	MODERN SPECIES	32	ENSCARG00000062270	med12 (ENSCARG00000062004)	MARS2 (ENSCARG00000061972)	hspa4b (ENSCARG00000060769)	ndfip1 (ENSCARG00000060662)	nr3c1 (ENSCARG00000060515)	kctd16a (ENSCARG00000060484)	ENSCARG00000060458	kif3a (ENSCARG00000060327)	il4 (ENSCARG00000060309)	ENSCARG00000060304	msx2a (ENSCARG00000060278)	cpeb4a (ENSCARG00000060205)	stc2a (ENSCARG00000060172)	nkx2.5 (ENSCARG00000060156)	CHRM1 (ENSCARG00000060139) #22	dpf2l (ENSCARG00000059652)	ENSCARG00000059629	KLHL3 (ENSCARG00000058914)	fam13b (ENSCARG00000058522)	CXCL14 (ENSCARG00000058412)	slit3 (ENSCARG00000058217)	ENSCARG00000058170	ENSCARG00000058150	cplx2 (ENSCARG00000058129)	slc25a48 (ENSCARG00000058076)	glra1 (ENSCARG00000057880)	g3bp1 (ENSCARG00000057707)	sparc (ENSCARG00000057630)	atox1 (ENSCARG00000057609)	SLC36A1 (ENSCARG00000056866)
Zebrafish	MODERN SPECIES	5	fgf1a (ENSDARG00000017542)	nr3c1 (ENSDARG00000025032)	kctd16a (ENSDARG00000004648)	ENSDARG00000101178	kif3a (ENSDARG00000087538)	il4 (ENSDARG00000087909)	ENSDARG00000105377	ENSDARG00000071640	ENSDARG00000110728	msx2a (ENSDARG00000104651)	ENSDARG00000105348	cpeb4a (ENSDARG00000056691)	stc2a (ENSDARG00000056680)	nkx2.5 (ENSDARG00000018004)	BNIP1 (ENSDARG00000078259)	CHRM1 (ENSDARG00000037292) #22	dpf2l (ENSDARG00000037291)	hnrnpa0a (ENSDARG00000089302)	KLHL3 (ENSDARG00000056647)	fam13b (ENSDARG00000076779)	ENSDARG00000078398	cxcl14 (ENSDARG00000056627)	slit3 (ENSDARG00000034268)	ENSDARG00000002463	ENSDARG00000101569	pde6a (ENSDARG00000000380)	tmem216 (ENSDARG00000091576)	ENSDARG00000001162	ENSDARG00000000394	ENSDARG00000099345	HTR4 (ENSDARG00000061940)
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00940000162301 #22
Denticle herring	MODERN SPECIES	9	gcna (ENSDCDG00000026407)	mcts1 (ENSDCDG00000026409)	c1galt1c1 (ENSDCDG00000026410)	ENSDCDG00000026416	fgfrl1b (ENSDCDG00000026418)	FBXO38 (ENSDCDG00000026428)	csnk1a1 (ENSDCDG00000026463)	ENSDCDG00000026488	ENSDCDG00000026489	ENSDCDG00000026492	SIL1 (ENSDCDG00000026494)	spdl1 (ENSDCDG00000026501)	ENSDCDG00000026572	ENSDCDG00000026577	ENSDCDG00000026627	CHRM1 (ENSDCDG00000026629) #22	pola2 (ENSDCDG00000026640)	ENSDCDG00000027304	ENSDCDG00000027305	TENM2 (ENSDCDG00000027366)	ENSDCDG00000029688	hmmr (ENSDCDG00000029699)	insb (ENSDCDG00000029707)	cyfip2 (ENSDCDG00000029721)	itk (ENSDCDG00000029784)	med7 (ENSDCDG00000029978)	ENSDCDG00000029984	ENSDCDG00000029991	si:ch211-175m2.5 (ENSDCDG00000030009)	smim19 (ENSDCDG00000030011)	ENSDCDG00000030014
Spotted gar	MODERN SPECIES	667	ENSLOCG00000002922	ENSLOCG00000002901	ENSLOCG00000002884	ENSLOCG00000002865	ENSLOCG00000002850	ENSLOCG00000002836	zgc:165604 (ENSLOCG00000002821)	ENSLOCG00000002801	ENSLOCG00000002787	rbm4.2 (ENSLOCG00000002772)	rbm4.3 (ENSLOCG00000002755)	ENSLOCG00000002738	ENSLOCG00000002729	pmt (ENSLOCG00000002703)	ENSLOCG00000002679	CHRM1 (ENSLOCG00000017613) #22	ENSLOCG00000002661	ENSLOCG00000002649	ENSLOCG00000002634	ENSLOCG00000002616	ENSLOCG00000002601	ENSLOCG00000002587	bbs1 (ENSLOCG00000002571)	SLC29A2 (ENSLOCG00000002549)	ppp1cbl (ENSLOCG00000002537)	PCNX3 (ENSLOCG00000002523)	MAP3K11 (ENSLOCG00000002503)	ENSLOCG00000002490	ENSLOCG00000002471	ENSLOCG00000017612	ENSLOCG00000002397