Otophysi ANCESTRAL SPECIES 142 ENSGT00940000156066.o ENSGT00940000162258 ENSGT00940000160802.a ENSGT00990000204401 ENSGT00550000074797.a.a ENSGT00390000001360.q.b ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT00940000159752 ENSGT00390000002625 ENSGT00940000158363 ENSGT00940000166439 ENSGT00390000002453.a ENSGT00940000158096.e ENSGT00940000160984 #21 ENSGT00940000166134 #22 ENSGT00940000156163.i.a #23 ENSGT00940000159690.a #24 ENSGT00890000139503 #25 ENSGT00940000157806.e #26 ENSGT00940000179201 #27 ENSGT00390000007999 #28 ENSGT00390000001742.b #29 Cyprinoidei ANCESTRAL SPECIES 4 ENSGT00940000153887.B #7 ENSGT00940000157969 #8 ENSGT00940000155736.D #9 ENSGT00940000159557 #10 ENSGT01000000214804 #11 ENSGT00940000154656.pb #12 ENSGT00670000099420 #13 ENSGT00940000156844.a.w.a #14 ENSGT00940000155478.hb.a.a #15 ENSGT00950000182843.a.a.a.b.a.b #16 ENSGT00450000040324.a.a.b #17 ENSGT00530000063869.A #18 ENSGT00940000165230.a #19 ENSGT00950000183630 #20 ENSGT00940000160984 #21 ENSGT00940000166134 #22 ENSGT00940000156163.i.a #23 ENSGT00940000159690.a #24 ENSGT00890000139503 #25 ENSGT00940000157806.e #26 ENSGT00940000179201 #27 ENSGT00390000007999 #28 ENSGT00390000001742.b #29 ENSGT00940000158096.e ENSGT00390000002453.a ENSGT00940000166439 ENSGT00940000158363 ENSGT00390000002625 ENSGT00940000159752.i ENSGT00390000009030 ENSGT00940000155420.a.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 249 ENSGT00940000153887.B.a #7 ENSGT00940000157969.tb #8 ENSGT00940000155736.D.k #9 ENSGT00940000159557.b #10 ENSGT01000000214804.d #11 ENSGT00940000154656.pb.c.a #12 ENSGT00670000099420.b #13 ENSGT00940000156844.a.w.a.b #14 ENSGT00940000155478.hb.a.a.d #15 ENSGT00950000182843.a.a.a.b.a.b.b #16 ENSGT00450000040324.a.a.b.c #17 ENSGT00530000063869.A.c #18 ENSGT00940000165230.a.a #19 ENSGT00950000183630.a #20 ENSGT00940000160984.g #21 ENSGT00940000166134.b #22 ENSGT00940000156163.i.a.a #23 ENSGT00940000159690.a.b #24 ENSGT00890000139503.a #25 ENSGT00940000157806.e.b #26 ENSGT00940000179201 #27 ENSGT00390000007999.k.b #28 ENSGT00390000001742.b.b #29 Goldfish MODERN SPECIES 6 GPR4 (ENSCARG00000060772) eml2 (ENSCARG00000059729) #7 GCGR (ENSCARG00000059600) #8 ENSCARG00000059551 #9 CLIP3 (ENSCARG00000059293) #10 dharma (ENSCARG00000059255) #11 si:ch211-137a8.2 (ENSCARG00000059231) #12 ENSCARG00000059199 #13 zgc:162698 (ENSCARG00000059116) #14 capns1b (ENSCARG00000058949) #15 zgc:101731 (ENSCARG00000058881) #16 zgc:113149 (ENSCARG00000058815) #17 xaf1 (ENSCARG00000058797) #18 rap1gap2a (ENSCARG00000058565) #19 tsku (ENSCARG00000058538) #21 gucy2f (ENSCARG00000057699) #22 serpinh1b (ENSCARG00000057657) #23 GDPD5 (ENSCARG00000057604) #24 hspa13 (ENSCARG00000057577) #25 samsn1a (ENSCARG00000057563) #26 NRIP1 (ENSCARG00000057559) #28 zgc:153372 (ENSCARG00000057529) #29 vgll2a (ENSCARG00000057521) rfx6 (ENSCARG00000057236) igf2r (ENSCARG00000056672) slc22a2 (ENSCARG00000056249) plg (ENSCARG00000053849) ENSCARG00000053659 ENSCARG00000053547 dph1 (ENSCARG00000053421) ppm1da (ENSCARG00000053410) Cyprininae_a ANCESTRAL SPECIES 41 ENSGT00940000153887.B.a #7 ENSGT00940000157969.tb #8 ENSGT00940000155736.D.k #9 ENSGT00940000159557.b #10 ENSGT01000000214804.d #11 ENSGT00940000154656.pb.c.a #12 ENSGT00670000099420.b #13 ENSGT00940000156844.a.w.a.b #14 ENSGT00940000155478.hb.a.a.d #15 ENSGT00950000182843.a.a.a.b.a.b.b #16 ENSGT00450000040324.a.a.b.c #17 ENSGT00530000063869.A.c #18 ENSGT00940000165230.a.a #19 ENSGT00950000183630.a #20 ENSGT00940000160984.g #21 ENSGT00940000166134.b #22 ENSGT00940000156163.i.a.a #23 ENSGT00940000159690.a.b #24 ENSGT00890000139503.a #25 ENSGT00940000157806.e.b #26 ENSGT00940000179201 #27 ENSGT00390000007999.k.b #28 ENSGT00390000001742.b.b #29 ENSGT00940000158096.e.c ENSGT00390000002453.a.b ENSGT00940000166439.k ENSGT00940000158363.i ENSGT00390000009030 ENSGT00940000155420.a.a.h ENSGT00390000001360.q.b.a ENSGT00940000181892 Common carp reference MODERN SPECIES 26 ENSCCRG00000028184 #8 ENSCCRG00000071778 ENSCCRG00000028479 #9 ENSCCRG00000078602 #10 dharma (ENSCCRG00000028349) #11 si:ch211-137a8.2 (ENSCCRG00000028355) #12 ENSCCRG00000076335 #13 zgc:162698 (ENSCCRG00000028394) #14 capns1b (ENSCCRG00000023390) #15 zgc:101731 (ENSCCRG00000023743) #16 zgc:113149 (ENSCCRG00000023402) #17 xaf1 (ENSCCRG00000023409) #18 rap1gap2a (ENSCCRG00000023073) #19 ENSCCRG00000023347 #20 tsku (ENSCCRG00000074676) #21 gucy2f (ENSCCRG00000020330) #22 serpinh1b (ENSCCRG00000024067) #23 hspa13 (ENSCCRG00000074795) #25 samsn1a (ENSCCRG00000021531) #26 si:ch211-207n23.2 (ENSCCRG00000068793) #27 ENSCCRG00000057215 #24 ENSCCRG00000028300 #28 zgc:153372 (ENSCCRG00000028305) #29 ENSCCRG00000049207 ENSCCRG00000022019 ENSCCRG00000045887 ENSCCRG00000045470 nlk2 (ENSCCRG00000045476) lyrm9 (ENSCCRG00000002540) nos2b (ENSCCRG00000002048) msi2b (ENSCCRG00000077313) Golden-line barbel MODERN SPECIES 5 capns1b (ENSSGRG00000022782) #15 zgc:101731 (ENSSGRG00000022780) #16 zgc:113149 (ENSSGRG00000022778) #17 xaf1 (ENSSGRG00000022777) #18 rap1gap2a (ENSSGRG00000022769) #19 ENSSGRG00000022767 #20 tsku (ENSSGRG00000022766) #21 gucy2f (ENSSGRG00000022493) #22 serpinh1b (ENSSGRG00000022486) #23 GDPD5 (ENSSGRG00000022234) #24 hspa13 (ENSSGRG00000022224) #25 samsn1a (ENSSGRG00000022222) #26 NRIP1 (ENSSGRG00000022216) #28 zgc:153372 (ENSSGRG00000022186) #29 WSCD1 (ENSSGRG00000022185) ENSSGRG00000022183 ENSSGRG00000022182 nlk2 (ENSSGRG00000022181) nos2b (ENSSGRG00000022169) mrps23 (ENSSGRG00000022165) msi2b (ENSSGRG00000021552) akap1b (ENSSGRG00000021314) ENSSGRG00000021310 Cyprininae ANCESTRAL SPECIES 14 ENSGT00940000157969.sb ##8 ENSGT00940000155736.D.l ##9 ENSGT00940000157706.n ENSGT00940000159557.a ##10 ENSGT01000000214804.c ##11 ENSGT00940000154656.pb.c.b ##12 ENSGT00670000099420.a ##13 ENSGT00940000156844.a.w.a.a ##14 ENSGT00940000155478.hb.a.a.c ##15 ENSGT00950000182843.a.a.a.b.a.b.a ##16 ENSGT00450000040324.a.a.b.d ##17 ENSGT00530000063869.A.d ##18 ENSGT00940000165230.a.b ##19 ENSGT00950000183630.b ##20 ENSGT00940000160984.h ##21 ENSGT00940000166134.a ##22 ENSGT00940000156163.i.a.b ##23 ENSGT00940000159690.a.a ##24 ENSGT00890000139503.b ##25 ENSGT00940000157806.e.a ##26 ENSGT00390000007999.k.a ##28 ENSGT00390000001742.b.a ##29 ENSGT00940000158096.e.d ENSGT00390000002453.a.a ENSGT00940000166439.l ENSGT00940000158363.j ENSGT00940000158363.i ENSGT00390000002625 ENSGT00940000159752.i.b ENSGT00390000009030 ENSGT00940000155420.a.a.h Cyprininae_a ANCESTRAL SPECIES 28 ENSGT00940000157969.sb ##8 ENSGT00940000155736.D.l ##9 ENSGT00940000157706.n ENSGT00940000159557.a ##10 ENSGT01000000214804.c ##11 ENSGT00940000154656.pb.c.b ##12 ENSGT00670000099420.a ##13 ENSGT00940000156844.a.w.a.a ##14 ENSGT00940000155478.hb.a.a.c ##15 ENSGT00950000182843.a.a.a.b.a.b.a ##16 ENSGT00450000040324.a.a.b.d ##17 ENSGT00530000063869.A.d ##18 ENSGT00940000165230.a.b ##19 ENSGT00950000183630.b ##20 ENSGT00940000160984.h ##21 ENSGT00940000166134.a ##22 ENSGT00940000156163.i.a.b ##23 ENSGT00940000159690.a.a ##24 ENSGT00890000139503.b ##25 ENSGT00940000157806.e.a ##26 ENSGT00390000007999.k.a ##28 ENSGT00390000001742.b.a ##29 ENSGT00940000158096.e.d ENSGT00390000002453.a.a ENSGT00940000166439.l ENSGT00940000158363.j ENSGT00390000002625 ENSGT00940000159752.i.b ENSGT00940000159752.i.a ENSGT00940000155420.a.a.g ENSGT00390000001360.q.b.b Golden-line barbel MODERN SPECIES 118 eml2 (ENSSGRG00000038138) ##7 ENSSGRG00000042417 ##8 ENSSGRG00000042420 ##9 ENSSGRG00000042592 CLIP3 (ENSSGRG00000042593) ##10 dharma (ENSSGRG00000042595) ##11 si:ch211-137a8.2 (ENSSGRG00000042596) ##12 zgc:162698 (ENSSGRG00000042597) ##14 ENSSGRG00000042599 ##13 capns1b (ENSSGRG00000042604) ##15 zgc:101731 (ENSSGRG00000042610) ##16 zgc:113149 (ENSSGRG00000042611) ##17 xaf1 (ENSSGRG00000042612) ##18 ENSSGRG00000042614 ##20 tsku (ENSSGRG00000042615) ##21 gucy2f (ENSSGRG00000042623) ##22 serpinh1b (ENSSGRG00000043082) ##23 GDPD5 (ENSSGRG00000043091) ##24 hspa13 (ENSSGRG00000043121) ##25 samsn1a (ENSSGRG00000043122) ##26 NRIP1 (ENSSGRG00000043127) ##28 zgc:153372 (ENSSGRG00000043129) ##29 WSCD1 (ENSSGRG00000043132) Common carp reference MODERN SPECIES 39 ENSCCRG00000074921 eml2 (ENSCCRG00000019929) ##7 ENSCCRG00000076718 ##8 ENSCCRG00000028235 ##9 ENSCCRG00000028240 ##10 dharma (ENSCCRG00000023258) ##11 si:ch211-137a8.2 (ENSCCRG00000075944) ##12 ENSCCRG00000077374 ##13 zgc:162698 (ENSCCRG00000071891) ##14 zgc:101731 (ENSCCRG00000078887) ##16 zgc:113149 (ENSCCRG00000072403) ##17 xaf1 (ENSCCRG00000064550) ##18 rap1gap2a (ENSCCRG00000023450) ##19 ENSCCRG00000020267 ##20 tsku (ENSCCRG00000063835) ##21 gucy2f (ENSCCRG00000023369) ##22 serpinh1b (ENSCCRG00000023068) ##23 ENSCCRG00000052898 ##24 hspa13 (ENSCCRG00000082266) ##25 samsn1a (ENSCCRG00000039962) ##26 ENSCCRG00000028270 ##28 zgc:153372 (ENSCCRG00000028273) ##29 ENSCCRG00000011790 ENSCCRG00000045422 ENSCCRG00000045885 nlk2 (ENSCCRG00000002027) nos2b (ENSCCRG00000001890) msi2b (ENSCCRG00000032061) akap1b (ENSCCRG00000028319) ENSCCRG00000074513 ENSCCRG00000068838 Goldfish MODERN SPECIES 34 eml2 (ENSCARG00000035095) ##7 ENSCARG00000037366 ##8 ENSCARG00000037461 ##9 CLIP3 (ENSCARG00000038026) ##10 dharma (ENSCARG00000038074) ##11 si:ch211-137a8.2 (ENSCARG00000038083) ##12 ENSCARG00000038095 ##13 zgc:162698 (ENSCARG00000038106) ##14 capns1b (ENSCARG00000038199) ##15 zgc:101731 (ENSCARG00000038303) ##16 zgc:113149 (ENSCARG00000038376) ##17 xaf1 (ENSCARG00000038389) ##18 rap1gap2a (ENSCARG00000038445) ##19 ENSCARG00000053280 ##20 tsku (ENSCARG00000053374) ##21 gucy2f (ENSCARG00000053464) ##22 serpinh1b (ENSCARG00000054190) ##23 GDPD5 (ENSCARG00000054226) ##24 hspa13 (ENSCARG00000054356) ##25 samsn1a (ENSCARG00000054369) ##26 NRIP1 (ENSCARG00000054432) ##28 zgc:153372 (ENSCARG00000054453) ##29 WSCD1 (ENSCARG00000054577) ENSCARG00000054590 ENSCARG00000054601 ENSCARG00000054625 nlk2 (ENSCARG00000054638) ENSCARG00000054791 nos2b (ENSCARG00000054887) ENSCARG00000060236 msi2b (ENSCARG00000060280) Zebrafish MODERN SPECIES 6 GPR4 (ENSDARG00000079479) eml2 (ENSDARG00000008808) #7 ENSDARG00000025478 #8 CLIP3 (ENSDARG00000054456) #10 dharma (ENSDARG00000040955) #11 si:ch211-137a8.2 (ENSDARG00000068926) #12 ENSDARG00000078748 #13 zgc:162698 (ENSDARG00000074967) #14 capns1b (ENSDARG00000013804) #15 zgc:101731 (ENSDARG00000040965) #16 zgc:113149 (ENSDARG00000040966) #17 xaf1 (ENSDARG00000068939) #18 rap1gap2a (ENSDARG00000061551) #19 ENSDARG00000075092 #20 tsku (ENSDARG00000040815) #21 gucy2f (ENSDARG00000025504) #22 serpinh1b (ENSDARG00000019949) #23 GDPD5 (ENSDARG00000076962) #24 ENSDARG00000110949 ENSDARG00000109743 hspa13 (ENSDARG00000040984) #25 samsn1a (ENSDARG00000054543) #26 si:ch211-207n23.2 (ENSDARG00000097157) #27 NRIP1 (ENSDARG00000068965) #28 zgc:153372 (ENSDARG00000068967) #29 ENSDARG00000069066 nlk2 (ENSDARG00000028793) lyrm9 (ENSDARG00000075528) nos2b (ENSDARG00000031976) mrps23 (ENSDARG00000033973) msi2b (ENSDARG00000032614) Characiphysae ANCESTRAL SPECIES 70 ENSGT00550000074977 ENSGT00940000154477.jc.a ENSGT00940000156324.f.a ENSGT00940000155457.b ENSGT00940000165744 ENSGT00390000000214.a.a.e ENSGT00940000155158.q.a ENSGT00940000160721 ENSGT00390000009030 ENSGT00940000159752 ENSGT00390000002625 ENSGT00940000158363 ENSGT00940000166439 ENSGT00390000002453.a ENSGT00940000158096.e ENSGT00940000166134 #22 ENSGT00940000156163.i.a #23 ENSGT00940000159690.a #24 ENSGT00890000139503 #25 ENSGT00940000157806.e #26 ENSGT00940000179201 #27 ENSGT00950000183630 #20 ENSGT00940000165230.a #19 ENSGT00530000063869.A #18 ENSGT00510000048837 ENSGT00950000182894.C ENSGT00940000156538.b ENSGT00940000166189 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000165093 Channel catfish MODERN SPECIES 8 ENSIPUG00000015338 ENSIPUG00000015316 ENSIPUG00000015304 ENSIPUG00000015284 ENSIPUG00000015276 ENSIPUG00000015268 Mrps23 (ENSIPUG00000015227) nos2 (ENSIPUG00000015080) lyrm9 (ENSIPUG00000015062) NOS2 (ENSIPUG00000015006) nlk (ENSIPUG00000014972) ENSIPUG00000014954 ENSIPUG00000014930 ENSIPUG00000014919 wscd1 (ENSIPUG00000014885) gucy2f (ENSIPUG00000014854) #22 serpinh1b (ENSIPUG00000014838) #23 kbtbd3 (ENSIPUG00000014828) ENSIPUG00000014807 tomt (ENSIPUG00000014788) anapc15 (ENSIPUG00000014780) folr (ENSIPUG00000014768) inppl1a (ENSIPUG00000014726) GDPD5 (ENSIPUG00000014617) #24 HSPA13 (ENSIPUG00000014573) #25 samsn1a (ENSIPUG00000014553) #26 zbtb7b (ENSIPUG00000014538) NRIP1 (ENSIPUG00000014531) #28 zgc:153372 (ENSIPUG00000014484) #29 tsku (ENSIPUG00000014475) #21 ENSIPUG00000014446 #20 Characiphysae_b ANCESTRAL SPECIES 81 ENSGT00550000074977 ENSGT00940000154477.jc.a ENSGT00940000156324.f.a ENSGT00940000155457.b ENSGT00940000165744 ENSGT00390000000214.a.a.e ENSGT00940000155158.q.a ENSGT00940000160721 ENSGT00390000009030 ENSGT00940000159752 ENSGT00390000002625 ENSGT00940000158363 ENSGT00940000166439 ENSGT00390000002453.a ENSGT00940000158096.e ENSGT00940000166134 #22 ENSGT00940000156163.i.a #23 ENSGT00940000159690.a #24 ENSGT00890000139503 #25 ENSGT00940000157806.e #26 ENSGT00940000179201 #27 ENSGT00950000183630 #20 ENSGT00940000165230.a #19 ENSGT00530000063869.A #18 ENSGT00510000048837 ENSGT00950000182894.C ENSGT00940000156538.b ENSGT00940000166189 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000165093 Characoidei ANCESTRAL SPECIES 75 ENSGT00550000074977 ENSGT00940000154477.jc.a ENSGT00940000156324.f.a ENSGT00940000165744 ENSGT00390000000214.a.a.e ENSGT00940000155158.q.a.g ENSGT00940000160721 ENSGT00390000009030 ENSGT00940000159752.n ENSGT00940000159752.m ENSGT00390000002625 ENSGT00940000158363 ENSGT00940000166439 ENSGT00390000002453.a ENSGT00940000158096.e ENSGT00940000166134 #22 ENSGT00940000156163.i.a #23 ENSGT00940000159690.a #24 ENSGT00890000139503 #25 ENSGT00940000157806.e #26 ENSGT00940000179201 #27 ENSGT00950000183630 #20 ENSGT00940000165230.a #19 ENSGT00530000063869.A #18 ENSGT00950000182894.C ENSGT00940000156538.b ENSGT00940000166189 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000165093 ENSGT00940000166005 Red-bellied piranha MODERN SPECIES 126 robo2 (ENSPNAG00000016285) ENSPNAG00000016041 ENSPNAG00000016026 ENSPNAG00000015975 stim1a (ENSPNAG00000015878) rhoga (ENSPNAG00000015827) CHRNA10 (ENSPNAG00000015806) mrps23 (ENSPNAG00000015802) NOS2 (ENSPNAG00000015774) NOS2 (ENSPNAG00000015647) lyrm9 (ENSPNAG00000015585) nlk2 (ENSPNAG00000003401) ENSPNAG00000015559 ENSPNAG00000015551 WSCD1 (ENSPNAG00000015536) gucy2f (ENSPNAG00000015502) #22 serpinh1b (ENSPNAG00000006681) #23 GDPD5 (ENSPNAG00000015427) #24 hspa13 (ENSPNAG00000015384) #25 samsn1a (ENSPNAG00000015369) #26 si:ch211-207n23.2 (ENSPNAG00000015342) #27 ENSPNAG00000015326 #28 zgc:153372 (ENSPNAG00000015315) #29 Mexicana tetra MODERN SPECIES rhoga (ENSAMXG00000030572) ENSAMXG00000033028 ENSAMXG00000041100 rhoga (ENSAMXG00000036246) CHRNA10 (ENSAMXG00000030028) mrps23 (ENSAMXG00000011868) NOS2 (ENSAMXG00000011861) NOS2 (ENSAMXG00000010210) lyrm9 (ENSAMXG00000005229) nlk2 (ENSAMXG00000005240) ENSAMXG00000043701 ENSAMXG00000005256 ENSAMXG00000025922 ENSAMXG00000031504 WSCD1 (ENSAMXG00000041764) gucy2f (ENSAMXG00000000032) #22 serpinh1b (ENSAMXG00000031437) #23 GDPD5 (ENSAMXG00000000061) #24 hspa13 (ENSAMXG00000042300) #25 cdk5r1a (ENSAMXG00000036647) samsn1a (ENSAMXG00000000068) #26 si:ch211-207n23.2 (ENSAMXG00000038464) #27 NRIP1 (ENSAMXG00000025365) #28 zgc:153372 (ENSAMXG00000000075) #29 tsku (ENSAMXG00000037547) #21 ENSAMXG00000000079 #20 rap1gap2a (ENSAMXG00000000087) #19 ENSAMXG00000043891 xaf1 (ENSAMXG00000000093) #18 lhx1a (ENSAMXG00000038705) ENSAMXG00000043616 Electric eel MODERN SPECIES 493 nlk2 (ENSEEEG00000016709) ENSEEEG00000016707 ENSEEEG00000016706 WSCD1 (ENSEEEG00000016704) gucy2f (ENSEEEG00000016700) #22 serpinh1b (ENSEEEG00000016697) #23 GDPD5 (ENSEEEG00000016551) #24 hspa13 (ENSEEEG00000016541) #25 samsn1a (ENSEEEG00000016540) #26 NRIP1 (ENSEEEG00000016539) #28 ENSEEEG00000016538