Haplochromini	ANCESTRAL SPECIES	46	ENSGT00940000157201	ENSGT00390000012204 #7	ENSGT00390000012547.b.u #8	ENSGT00390000013820 #9	ENSGT01070000253816.a.a.b #11	ENSGT00940000153313.B #12	ENSGT00940000158106 #13	ENSGT00390000006601 #14	ENSGT01100000267124	ENSGT00940000158556 #16	ENSGT00950000182827.A #17	ENSGT00940000164470.a #18	ENSGT00940000155202 #19	ENSGT00940000154517.mb #20	ENSGT00530000063528.B #21	ENSGT00940000166292 #22	ENSGT00940000166446.d.a ##23	ENSGT00990000203619.A.a.e #29	ENSGT01060000248589.C.g.a #30	ENSGT00940000155600.a.b #31	ENSGT00940000160782 #32	ENSGT00940000154443.f #33	ENSGT00390000005923 #34	ENSGT00940000155558 #35	ENSGT00940000165507 #37	ENSGT00940000156472.d	ENSGT00940000157043	ENSGT00390000013151.a.a.b	ENSGT00940000160639.b.b	ENSGT01050000244823.d.b.b.a.a.a.b.a.b.b.a.o.a.a.b	ENSGT01050000244823.d.b.b.a.a.a.b.a.b.b.a.o.a.b.d
Haplochromini_A	ANCESTRAL SPECIES	51	ENSGT00940000157201	ENSGT00390000012204 #7	ENSGT00390000012547.b.u #8	ENSGT00390000013820 #9	ENSGT01070000253816.a.a.b #11	ENSGT00940000153313.B #12	ENSGT00940000158106 #13	ENSGT00390000006601 #14	ENSGT01100000267124	ENSGT00940000158556 #16	ENSGT00950000182827.A #17	ENSGT00940000164470.a #18	ENSGT00940000155202 #19	ENSGT00940000154517.mb #20	ENSGT00530000063528.B #21	ENSGT00940000166292 #22	ENSGT00940000166446.d.a ##23	ENSGT00940000166446.d.b #24	ENSGT00940000155600.a.b #31	ENSGT00990000203619.A.a.e #29	ENSGT01060000248589.C.g.a #30	ENSGT00940000160782 #32	ENSGT00940000154443.f #33	ENSGT00390000005923 #34	ENSGT00940000155558 #35	ENSGT00940000165507 #37	ENSGT00940000156472.d	ENSGT00940000157043	ENSGT00390000013151.a.a.b	ENSGT00940000160639.b.b	ENSGT01050000244823.d.b.b.a.a.a.b.a.b.b.a.o.a.a.b
Haplochromini_B	ANCESTRAL SPECIES	36	ENSGT00940000157201	ENSGT00390000012204 #7	ENSGT00390000012547.b.u #8	ENSGT00390000013820 #9	ENSGT01070000253816.a.a.b #11	ENSGT00940000153313.B #12	ENSGT00940000158106 #13	ENSGT00390000006601 #14	ENSGT00390000011709.gb #15	ENSGT00940000158556 #16	ENSGT00950000182827.A #17	ENSGT00940000164470.a #18	ENSGT00940000155202 #19	ENSGT00940000154517.mb #20	ENSGT00530000063528.B #21	ENSGT00940000166292 #22	ENSGT00940000166446.c.b.b #23	ENSGT00940000166446.c.a #26	ENSGT00940000162068.G.b.f.b.a #27	ENSGT00940000181718 #28	ENSGT00990000203619.A.a.e #29	ENSGT01060000248589.C.g.a #30	ENSGT00940000155600.a.b #31	ENSGT00940000160782 #32	ENSGT00940000154443.f #33	ENSGT00390000005923 #34	ENSGT00940000155558 #35	ENSGT00940000165507 #37	ENSGT00940000156472.d	ENSGT00940000157043	ENSGT00390000013151.a.a.b
Zebra mbuna	MODERN SPECIES	1098	rif1 (ENSMZEG00005020920) #7	idh1 (ENSMZEG00005020906) #8	EPSTI1 (ENSMZEG00005020903) #9	ENSMZEG00005020900 #10	ENSMZEG00005020896 #11	AKAP11 (ENSMZEG00005020893) #12	DGKH (ENSMZEG00005020873) #13	vwa8 (ENSMZEG00005020838) #14	rgcc (ENSMZEG00005020831) #15	f5 (ENSMZEG00005020824) #16	slc35a5 (ENSMZEG00005020821) #17	ccdc80 (ENSMZEG00005020819) #18	KDM6A (ENSMZEG00005020798) #19	fundc1 (ENSMZEG00005020791) #20	efhc2 (ENSMZEG00005020787) #21	ENSMZEG00005020784 #22	mao (ENSMZEG00005020779) #23	ENSMZEG00005020776 #24	ENSMZEG00005020773 #25	mao (ENSMZEG00005020763) #26	ENSMZEG00005020753 #27	ENSMZEG00005020747 #28	GPR82 (ENSMZEG00005020740) #29	gpr34b (ENSMZEG00005020735) #30	CASK (ENSMZEG00005020675) #31	nyx (ENSMZEG00005020648) #32	ddx3xa (ENSMZEG00005020636) #33	nup35 (ENSMZEG00005020619) #34	dnajc10 (ENSMZEG00005020612) #35	ENSMZEG00005020608 #36	frzb (ENSMZEG00005020605) #37
Eastern happy	MODERN SPECIES	7	idh1 (ENSACLG00000010579) #8	idh1 (ENSACLG00000010612) ##8	ENSACLG00000010762 #9	ENSACLG00000010828 #11	AKAP11 (ENSACLG00000010835) #12	ENSACLG00000010849	DGKH (ENSACLG00000010870) #13	vwa8 (ENSACLG00000011362) #14	rgcc (ENSACLG00000011410) #15	f5 (ENSACLG00000011439) #16	slc35a5 (ENSACLG00000011451) #17	ccdc80 (ENSACLG00000011459) #18	KDM6A (ENSACLG00000011692) #19	fundc1 (ENSACLG00000011814) #20	efhc2 (ENSACLG00000011880) #21	ENSACLG00000011989 #22	mao (ENSACLG00000012011) #23	mao (ENSACLG00000012102) #26	ENSACLG00000012184 #27	CASK (ENSACLG00000012243) #31	ENSACLG00000012837 #28	ENSACLG00000012845 #30	ENSACLG00000012859	nyx (ENSACLG00000012864) #32	ENSACLG00000012867	ddx3xa (ENSACLG00000013517) #33	nup35 (ENSACLG00000013918) #34	dnajc10 (ENSACLG00000013993) #35	frzb (ENSACLG00000014035) #37	dusp19a (ENSACLG00000014079)	ENSACLG00000014097
P. nyererei	MODERN SPECIES	455			idh1 (ENSPNYG00000011180) #8	ENSPNYG00000011205 #11	AKAP11 (ENSPNYG00000011223) #12	DGKH (ENSPNYG00000011257) #13	vwa8 (ENSPNYG00000011389) #14	ENSPNYG00000011660	rgcc (ENSPNYG00000011675) #15	f5 (ENSPNYG00000011696) #16	slc35a5 (ENSPNYG00000011741) #17	ccdc80 (ENSPNYG00000011778) #18	KDM6A (ENSPNYG00000011879) #19	fundc1 (ENSPNYG00000011956) #20	efhc2 (ENSPNYG00000011988) #21	ENSPNYG00000012013 #22	mao (ENSPNYG00000012032) ##23	ENSPNYG00000012071 #24	CASK (ENSPNYG00000012117) #31	GPR82 (ENSPNYG00000012180) #29	gpr34b (ENSPNYG00000012218) #30	nyx (ENSPNYG00000012273) #32	ddx3xa (ENSPNYG00000012338) #33	nup35 (ENSPNYG00000012486) #34	dnajc10 (ENSPNYG00000012528) #35	frzb (ENSPNYG00000012577) #37	ENSPNYG00000012604	sh3bp4 (ENSPNYG00000012662)	arl4cb (ENSPNYG00000012693)	ENSPNYG00000012724	ENSPNYG00000012739
Burton s mouthbrooder	MODERN SPECIES	548		idh1 (ENSHBUG00000014969) #8	ENSHBUG00000014948 #9	ENSHBUG00000000949 #11	AKAP11 (ENSHBUG00000014928) #12	DGKH (ENSHBUG00000014882) #13	vwa8 (ENSHBUG00000014695) #14	ENSHBUG00000014596	rgcc (ENSHBUG00000014585) #15	f5 (ENSHBUG00000000424) #16	slc35a5 (ENSHBUG00000014527) #17	ccdc80 (ENSHBUG00000014497) #18	KDM6A (ENSHBUG00000014387) #19	fundc1 (ENSHBUG00000012775) #20	efhc2 (ENSHBUG00000012733) #21	ENSHBUG00000012711 #22	ENSHBUG00000012699 #24