Mus	ANCESTRAL SPECIES	1	ENSGT01050000244868.b.a #7	ENSGT00390000001761 #8	ENSGT00440000039084 #9	ENSGT00940000155214 #10	ENSGT00530000062932.d #11	ENSGT00390000009349 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #25	ENSGT00940000161616 #26	ENSGT00940000156744 #27	ENSGT00390000004524 #28	ENSGT00940000162328 #29	ENSGT00940000154645.B #30	ENSGT00940000160451 #31	ENSGT00950000183047.d #32	ENSGT00940000158829 #33	ENSGT00390000009787 #34	ENSGT00950000182888.a.a.a.j.b #35	ENSGT00950000182888.a.a.a.j.a #36	ENSGT00390000011980.b.b #37	ENSGT00940000161643
Mus_A	ANCESTRAL SPECIES		ENSGT01050000244868.b.a #7	ENSGT00390000001761 #8	ENSGT00440000039084 #9	ENSGT00940000155214 #10	ENSGT00530000062932.d #11	ENSGT00390000009349 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #25	ENSGT00940000161616 #26	ENSGT00940000156744 #27	ENSGT00390000004524 #28	ENSGT00940000162328 #29	ENSGT00940000154645.B #30	ENSGT00940000160451 #31	ENSGT00950000183047.d #32	ENSGT00940000158829 #33	ENSGT00390000009787 #34	ENSGT00950000182888.a.a.a.j.b #35	ENSGT00950000182888.a.a.a.j.a #36	ENSGT00390000011980.b.b #37	ENSGT00940000161643
Mus_B	ANCESTRAL SPECIES	1	ENSGT01050000244868.b.a #7	ENSGT00390000001761 #8	ENSGT00440000039084 #9	ENSGT00940000155214 #10	ENSGT00530000062932.d #11	ENSGT00390000009349 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #25	ENSGT00940000161616 #26	ENSGT00940000156744 #27	ENSGT00390000004524 #28	ENSGT00940000162328 #29	ENSGT00940000154645.B #30	ENSGT00940000160451 #31	ENSGT00950000183047.d #32	ENSGT00940000158829 #33	ENSGT00390000009787 #34	ENSGT00950000182888.a.a.a.j.b #35	ENSGT00950000182888.a.a.a.j.a #36	ENSGT00390000011980.b.b #37	ENSGT00940000161643
Mouse	MODERN SPECIES	11	Lcn2 (ENSMUSG00000026822) #7	Bbln (ENSMUSG00000039195) #8	Ciz1 (ENSMUSG00000039205) #9	Dnm1 (ENSMUSG00000026825) #10	Golga2 (ENSMUSG00000002546) #11	Swi5 (ENSMUSG00000044627) #12	Uck1 (ENSMUSG00000002550) #13	Pomt1 (ENSMUSG00000039254) #14	Prrc2b (ENSMUSG00000039262) #15	Plpp7 (ENSMUSG00000051373) #16	Fam78a (ENSMUSG00000050592) #17	Nup214 (ENSMUSG00000001855) #18	Aif1l (ENSMUSG00000001864) #19	Lamc3 (ENSMUSG00000026840) #20	Fibcd1 (ENSMUSG00000026841) #21	Qrfp (ENSMUSG00000043102) #22	Gm56303 (ENSMUSG00000118600) #23	Abl1 (ENSMUSG00000026842) #24	Exosc2 (ENSMUSG00000039356) #25	Prdm12 (ENSMUSG00000079466) #26	Fubp3 (ENSMUSG00000026843) #27	Ass1 (ENSMUSG00000076441) #28	Hmcn2 (ENSMUSG00000055632) #29	Ncs1 (ENSMUSG00000062661) #30	Gpr107 (ENSMUSG00000000194) #31	Fnbp1 (ENSMUSG00000075415) #32	Usp20 (ENSMUSG00000026854) #33	BC005624 (ENSMUSG00000026851) #34	Tor1a (ENSMUSG00000026849) #35	Tor1b (ENSMUSG00000026848) #36	Ptges (ENSMUSG00000050737) #37
Mus_C	ANCESTRAL SPECIES		ENSGT01050000244868.b.a #7	ENSGT00390000001761 #8	ENSGT00440000039084 #9	ENSGT00940000155214 #10	ENSGT00530000062932.d #11	ENSGT00390000009349 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #25	ENSGT00940000161616 #26	ENSGT00940000156744 #27	ENSGT00390000004524 #28	ENSGT00940000162328 #29	ENSGT00940000154645.B #30	ENSGT00940000160451 #31	ENSGT00950000183047.d #32	ENSGT00940000158829 #33	ENSGT00390000009787 #34	ENSGT00950000182888.a.a.a.j.b #35	ENSGT00950000182888.a.a.a.j.a #36	ENSGT00390000011980.b.b #37	ENSGT00940000161643
spretus	MODERN SPECIES	11	Lcn2 (MGP_SPRETEiJ_G0024349) #7	Bbln (MGP_SPRETEiJ_G0024348) #8	Ciz1 (MGP_SPRETEiJ_G0024347) #9	Dnm1 (MGP_SPRETEiJ_G0024346) #10	Golga2 (MGP_SPRETEiJ_G0024345) #11	Swi5 (MGP_SPRETEiJ_G0024344) #12	Uck1 (MGP_SPRETEiJ_G0024343) #13	Pomt1 (MGP_SPRETEiJ_G0024342) #14	Prrc2b (MGP_SPRETEiJ_G0024341) #15	Plpp7 (MGP_SPRETEiJ_G0024340) #16	Fam78a (MGP_SPRETEiJ_G0024339) #17	Nup214 (MGP_SPRETEiJ_G0024338) #18	Aif1l (MGP_SPRETEiJ_G0024337) #19	Lamc3 (MGP_SPRETEiJ_G0024336) #20	Fibcd1 (MGP_SPRETEiJ_G0024335) #21	Qrfp (MGP_SPRETEiJ_G0024334) #22	Abl1 (MGP_SPRETEiJ_G0024333) #24	Exosc2 (MGP_SPRETEiJ_G0024332) #25	Prdm12 (MGP_SPRETEiJ_G0024331) #26	Fubp3 (MGP_SPRETEiJ_G0024330) #27	Ass1 (MGP_SPRETEiJ_G0024329) #28	Hmcn2 (MGP_SPRETEiJ_G0024328) #29	MGP_SPRETEiJ_G0024327	Gpr107 (MGP_SPRETEiJ_G0024326) #31	Fnbp1 (MGP_SPRETEiJ_G0024325) #32	Usp20 (MGP_SPRETEiJ_G0024324) #33	BC005624 (MGP_SPRETEiJ_G0024323) #34	Tor1b (MGP_SPRETEiJ_G0024322) #36	Tor1a (MGP_SPRETEiJ_G0024321) #35	Ptges (MGP_SPRETEiJ_G0024320) #37	Prrx2 (MGP_SPRETEiJ_G0024319)
Steppe mouse	MODERN SPECIES	2914														ENSMSIG00000019685 #20	Fibcd1 (ENSMSIG00000019790) #21	Qrfp (ENSMSIG00000019803) #22	Abl1 (ENSMSIG00000019810) #24	Exosc2 (ENSMSIG00000019857) #25	Prdm12 (ENSMSIG00000019870) #26	Fubp3 (ENSMSIG00000019874) #27	Ass1 (ENSMSIG00000019909) #28	Hmcn2 (ENSMSIG00000019934) #29	Ncs1 (ENSMSIG00000020106) #30	Gpr107 (ENSMSIG00000020135) #31	Fnbp1 (ENSMSIG00000020195) #32	Usp20 (ENSMSIG00000020970) #33	BC005624 (ENSMSIG00000021188) #34	Tor1a (ENSMSIG00000021233) #35	Tor1b (ENSMSIG00000021248) #36	Ptges (ENSMSIG00000021259) #37	Prrx2 (ENSMSIG00000021265)
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0023432 #7	Bbln (MGP_CAROLIEiJ_G0023431) #8	Ciz1 (MGP_CAROLIEiJ_G0023430) #9	Dnm1 (MGP_CAROLIEiJ_G0023429) #10	Golga2 (MGP_CAROLIEiJ_G0023428) #11	Swi5 (MGP_CAROLIEiJ_G0023427) #12	Uck1 (MGP_CAROLIEiJ_G0023426) #13	Pomt1 (MGP_CAROLIEiJ_G0023425) #14	Prrc2b (MGP_CAROLIEiJ_G0023424) #15	Plpp7 (MGP_CAROLIEiJ_G0023423) #16	Fam78a (MGP_CAROLIEiJ_G0023422) #17	Nup214 (MGP_CAROLIEiJ_G0023421) #18	Aif1l (MGP_CAROLIEiJ_G0023420) #19	Lamc3 (MGP_CAROLIEiJ_G0023419) #20	Fibcd1 (MGP_CAROLIEiJ_G0023418) #21	Qrfp (MGP_CAROLIEiJ_G0023417) #22	Abl1 (MGP_CAROLIEiJ_G0023416) #24	Exosc2 (MGP_CAROLIEiJ_G0023415) #25	Prdm12 (MGP_CAROLIEiJ_G0023414) #26	Fubp3 (MGP_CAROLIEiJ_G0023413) #27	MGP_CAROLIEiJ_G0023412 #28	Hmcn2 (MGP_CAROLIEiJ_G0023411) #29	Ncs1 (MGP_CAROLIEiJ_G0023410) #30	Gpr107 (MGP_CAROLIEiJ_G0023409) #31	Fnbp1 (MGP_CAROLIEiJ_G0023408) #32	Usp20 (MGP_CAROLIEiJ_G0023407) #33	BC005624 (MGP_CAROLIEiJ_G0023406) #34	Tor1a (MGP_CAROLIEiJ_G0023405) #35	Tor1b (MGP_CAROLIEiJ_G0023404) #36	Ptges (MGP_CAROLIEiJ_G0023403) #37	Prrx2 (MGP_CAROLIEiJ_G0023402)
Shrew mouse	MODERN SPECIES	16	MGP_PahariEiJ_G0024889 #7	Bbln (MGP_PahariEiJ_G0024888) #8	Ciz1 (MGP_PahariEiJ_G0024887) #9	Dnm1 (MGP_PahariEiJ_G0024886) #10	Golga2 (MGP_PahariEiJ_G0024885) #11	MGP_PahariEiJ_G0024884 #12	Uck1 (MGP_PahariEiJ_G0024883) #13	Pomt1 (MGP_PahariEiJ_G0024882) #14	Prrc2b (MGP_PahariEiJ_G0024881) #15	Plpp7 (MGP_PahariEiJ_G0024880) #16	Fam78a (MGP_PahariEiJ_G0024879) #17	Nup214 (MGP_PahariEiJ_G0024878) #18	Aif1l (MGP_PahariEiJ_G0024877) #19	Lamc3 (MGP_PahariEiJ_G0024876) #20	Fibcd1 (MGP_PahariEiJ_G0024875) #21	Qrfp (MGP_PahariEiJ_G0024874) #22	Abl1 (MGP_PahariEiJ_G0024873) #24	Exosc2 (MGP_PahariEiJ_G0024872) #25	Prdm12 (MGP_PahariEiJ_G0024871) #26	Fubp3 (MGP_PahariEiJ_G0024870) #27	Ass1 (MGP_PahariEiJ_G0024869) #28	MGP_PahariEiJ_G0024868 #29	Ncs1 (MGP_PahariEiJ_G0024867) #30	Gpr107 (MGP_PahariEiJ_G0024866) #31	Fnbp1 (MGP_PahariEiJ_G0024865) #32	Usp20 (MGP_PahariEiJ_G0024864) #33	BC005624 (MGP_PahariEiJ_G0024863) #34	Tor1a (MGP_PahariEiJ_G0024862) #35	Tor1b (MGP_PahariEiJ_G0024861) #36	Ptges (MGP_PahariEiJ_G0024860) #37	MGP_PahariEiJ_G0024859