Amniota	ANCESTRAL SPECIES	27	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00940000165854	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Mammalia	ANCESTRAL SPECIES	23	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Theria	ANCESTRAL SPECIES	23	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Primates	ANCESTRAL SPECIES	9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000165095	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000165095	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00910000148028	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.c.a.b ##29	ENSGT00390000004524.d ##29	ENSGT00940000165095	ENSGT00390000004524.c.a.a.a #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00910000147033	ENSGT00910000147295	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00910000148028	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B.h #26	ENSGT01010000230328 #25	ENSGT00940000153596.B.g ##26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.d ##29	ENSGT00940000165095	ENSGT00910000147740	ENSGT00390000004524.c.a.a.a.b #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000163010 #31	ENSGT00940000160451 #32
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00910000147295	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B.h #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.d ##29	ENSGT00940000165095	ENSGT00910000147740	ENSGT00390000004524.c.a.a.a.b #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00910000147295	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B.h #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.d ##29	ENSGT00940000165095	ENSGT00910000147740	ENSGT00390000004524.c.a.a.a.b #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00910000147295	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B.h #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00910000148843	ENSGT00910000147740	ENSGT00390000004524.c.a.a.a.b.d.b #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00910000147295	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B.h #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.c.a.a.a.b.d.b #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00910000146910	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Olive baboon	MODERN SPECIES	4	TTF1 (ENSPANG00000035653) #7	SETX (ENSPANG00000025990) #8	NTNG2 (ENSPANG00000025992) #9	MED27 (ENSPANG00000025993) #10	RAPGEF1 (ENSPANG00000025994) #11	PRRT1B (ENSPANG00000025986) #12	UCK1 (ENSPANG00000025985) #13	POMT1 (ENSPANG00000025980) #14	PRRC2B (ENSPANG00000025981) #15	PLPP7 (ENSPANG00000025982) #16	FAM78A (ENSPANG00000025983) #17	NUP214 (ENSPANG00000025984) #18	AIF1L (ENSPANG00000025979) #19	LAMC3 (ENSPANG00000025978) #20	FIBCD1 (ENSPANG00000048721) #21	QRFP (ENSPANG00000048091) #22	ENSPANG00000044231 #23	ABL1 (ENSPANG00000025965) #24	ENSPANG00000050722 #25	ENSPANG00000025966 #26	PRDM12 (ENSPANG00000025967) #27	FUBP3 (ENSPANG00000025968) #28	ENSPANG00000025969 #29	HMCN2 (ENSPANG00000025970) #30	ENSPANG00000033050 #31	GPR107 (ENSPANG00000025973) #32	FNBP1 (ENSPANG00000025974) #33	USP20 (ENSPANG00000025975) #34	C9orf78 (ENSPANG00000025976) #35	TOR1A (ENSPANG00000025977) #36	TOR1B (ENSPANG00000025956) #37
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B.h #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00910000148843	ENSGT00910000147740	ENSGT00390000004524.c.a.a.a.b.d.b #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.b.b.a.b.a.a.b	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT01100000263493.a.b.a.a.b.b.b.b.a.a.b.a	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT01100000263539.b.a.a.a.b.b.b.a.b.a.a.b	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B.h #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00910000148843	ENSGT00910000147740	ENSGT00390000004524.c.a.a.a.b.d.b #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Crab-eating macaque	MODERN SPECIES	6	MED27 (ENSMFAG00000003320) #10	RAPGEF1 (ENSMFAG00000038154) #11	PRRT1B (ENSMFAG00000058024) #12	UCK1 (ENSMFAG00000005947) #13	POMT1 (ENSMFAG00000038316) #14	PRRC2B (ENSMFAG00000002662) #15	ENSMFAG00000057079	PLPP7 (ENSMFAG00000042509) #16	FAM78A (ENSMFAG00000038474) #17	NUP214 (ENSMFAG00000042823) #18	AIF1L (ENSMFAG00000000641) #19	ENSMFAG00000062689	LAMC3 (ENSMFAG00000042402) #20	ENSMFAG00000058941	FIBCD1 (ENSMFAG00000003220) #21	QRFP (ENSMFAG00000056880) #22	ABL1 (ENSMFAG00000000271) #24	ENSMFAG00000056552	ENSMFAG00000000597 #26	PRDM12 (ENSMFAG00000040322) #27	FUBP3 (ENSMFAG00000038309) #28	ENSMFAG00000047356	ENSMFAG00000061702	ENSMFAG00000058109	ASS1 (ENSMFAG00000003315) #29	ENSMFAG00000036140 #30	ENSMFAG00000037355	GPR107 (ENSMFAG00000045947) #32	FNBP1 (ENSMFAG00000042440) #33	ENSMFAG00000056629	ENSMFAG00000060062
Rhesus	MODERN SPECIES	6	ENSMMUG00000058353	MED27 (ENSMMUG00000001727) #10	RAPGEF1 (ENSMMUG00000006479) #11	PRRT1B (ENSMMUG00000058925) #12	UCK1 (ENSMMUG00000009976) #13	POMT1 (ENSMMUG00000009975) #14	PRRC2B (ENSMMUG00000009973) #15	NUP214 (ENSMMUG00000021724) #18	ENSMMUG00000063727	PLPP7 (ENSMMUG00000047768) #16	FAM78A (ENSMMUG00000021278) #17	AIF1L (ENSMMUG00000042881) #19	LAMC3 (ENSMMUG00000002267) #20	ENSMMUG00000061789	FIBCD1 (ENSMMUG00000012713) #21	QRFP (ENSMMUG00000064112) #22	ABL1 (ENSMMUG00000012499) #24	EXOSC2 (ENSMMUG00000012498) #26	PRDM12 (ENSMMUG00000059085) #27	FUBP3 (ENSMMUG00000008249) #28	ENSMMUG00000063163	ENSMMUG00000053919	ENSMMUG00000001522 #29	HMCN2 (ENSMMUG00000047733) #30	ENSMMUG00000061477	ENSMMUG00000049177	GPR107 (ENSMMUG00000004200) #32	FNBP1 (ENSMMUG00000003799) #33	USP20 (ENSMMUG00000003797) #34	C15H9orf78 (ENSMMUG00000058799) #36	TOR1B (ENSMMUG00000003793) #37
Vervet Monkey	MODERN SPECIES	3	CFAP77 (ENSCSAG00000014940)	TTF1 (ENSCSAG00000014926) #7	SETX (ENSCSAG00000014918) #8	NTNG2 (ENSCSAG00000014906) #9	MED27 (ENSCSAG00000014901) #10	RAPGEF1 (ENSCSAG00000014892) #11	UCK1 (ENSCSAG00000014877) #13	POMT1 (ENSCSAG00000014870) #14	PRRC2B (ENSCSAG00000014854) #15	PLPP7 (ENSCSAG00000014839) #16	FAM78A (ENSCSAG00000014833) #17	NUP214 (ENSCSAG00000014824) #18	AIF1L (ENSCSAG00000014809) #19	ENSCSAG00000014800 #20	FIBCD1 (ENSCSAG00000014786) #21	QRFP (ENSCSAG00000019708) #22	ABL1 (ENSCSAG00000014767) #24	ENSCSAG00000014760 #26	PRDM12 (ENSCSAG00000014756) #27	FUBP3 (ENSCSAG00000014748) #28	ENSCSAG00000014739 ##29	ENSCSAG00000014730	ENSCSAG00000014723 #30	ENSCSAG00000014716 #31	GPR107 (ENSCSAG00000014709) #32	FNBP1 (ENSCSAG00000014702) #33	USP20 (ENSCSAG00000014672) #34	C9orf78 (ENSCSAG00000014663) #35	TOR1A (ENSCSAG00000014657) #36	TOR1B (ENSCSAG00000014644) #37	PTGES (ENSCSAG00000014619)
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00910000147295	ENSGT00390000012207.j #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00910000148028	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B.g ##26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00910000147740	ENSGT00390000004524.c.a.a.a.b #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35
Hominidae	ANCESTRAL SPECIES	10	ENSGT00910000147033	ENSGT00910000147295	ENSGT00390000012207.j #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B.g ##26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.c.a.a.a.b #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00390000012207.i.b #10	ENSGT00910000147033	ENSGT00910000147295	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B.g ##26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.c.a.a.a.b #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00390000012207.i.b #10	ENSGT00910000147033	ENSGT00910000147295	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B.g ##26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.c.a.a.a.b #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Pan	ANCESTRAL SPECIES	18	ENSGT00390000012207.i.b #10	ENSGT00910000147033	ENSGT00910000147295	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B.g ##26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.c.a.a.a.b #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	672															ENSPTRG00000043588 #21	ENSPTRG00000045754 #22	ENSPTRG00000050265 #24	ENSPTRG00000045766 ##26	ENSPTRG00000043324 #27	ENSPTRG00000044650 #28
Chimpanzee	MODERN SPECIES	22	MED27 (ENSPTRG00000021492) #10	ENSPTRG00000047190	ENSPTRG00000043931	RAPGEF1 (ENSPTRG00000021490) #11	PRRT1B (ENSPTRG00000051275) #12	UCK1 (ENSPTRG00000021489) #13	POMT1 (ENSPTRG00000021488) #14	ENSPTRG00000048981	PRRC2B (ENSPTRG00000021487) #15	PLPP7 (ENSPTRG00000021485) #16	FAM78A (ENSPTRG00000021484) #17	NUP214 (ENSPTRG00000021482) #18	AIF1L (ENSPTRG00000021481) #19	LAMC3 (ENSPTRG00000021480) #20	ENSPTRG00000021479 #21	QRFP (ENSPTRG00000021478) #22	ABL1 (ENSPTRG00000021477) #24	EXOSC2 (ENSPTRG00000021476) ##26	PRDM12 (ENSPTRG00000021475) #27	FUBP3 (ENSPTRG00000021474) #28	ASS1 (ENSPTRG00000021473) #29	HMCN2 (ENSPTRG00000021471) #30	NCS1 (ENSPTRG00000047046)	ENSPTRG00000042947	GPR107 (ENSPTRG00000021469) #32	FNBP1 (ENSPTRG00000021468) #33	USP20 (ENSPTRG00000021466) #34	C9H9orf78 (ENSPTRG00000021465) #35	TOR1A (ENSPTRG00000022599) #36	TOR1B (ENSPTRG00000023109) #37	PTGES (ENSPTRG00000021462)
Bonobo	MODERN SPECIES	22	MED27 (ENSPPAG00000043027) #10	ENSPPAG00000034497	ENSPPAG00000043227	RAPGEF1 (ENSPPAG00000040344) #11	ENSPPAG00000033521 #12	UCK1 (ENSPPAG00000042930) #13	POMT1 (ENSPPAG00000027406) #14	ENSPPAG00000038076	PRRC2B (ENSPPAG00000035196) #15	PLPP7 (ENSPPAG00000040214) #16	FAM78A (ENSPPAG00000031835) #17	NUP214 (ENSPPAG00000034806) #18	AIF1L (ENSPPAG00000020728) #19	LAMC3 (ENSPPAG00000034248) #20	FIBCD1 (ENSPPAG00000040268) #21	QRFP (ENSPPAG00000009604) #22	ABL1 (ENSPPAG00000036322) #24	EXOSC2 (ENSPPAG00000034796) ##26	ENSPPAG00000031506 #27	FUBP3 (ENSPPAG00000011103) #28	ASS1 (ENSPPAG00000035214) #29	HMCN2 (ENSPPAG00000030138) #30	NCS1 (ENSPPAG00000034386)	ENSPPAG00000023411	GPR107 (ENSPPAG00000031540) #32	FNBP1 (ENSPPAG00000014368) #33	USP20 (ENSPPAG00000043597) #34	C9orf78 (ENSPPAG00000032236) #35	ENSPPAG00000031041 #36	TOR1B (ENSPPAG00000030907) #37	PTGES (ENSPPAG00000031231)
Human	MODERN SPECIES	21	NTNG2 (ENSG00000196358) #9	MED27 (ENSG00000160563) #10	RAPGEF1 (ENSG00000107263) #11	PRRT1B (ENSG00000283526) #12	UCK1 (ENSG00000130717) #13	POMT1 (ENSG00000130714) #14	ENSG00000288841	ENSG00000291303	PRRC2B (ENSG00000288701) #15	PLPP7 (ENSG00000160539) #16	FAM78A (ENSG00000126882) #17	NUP214 (ENSG00000126883) #18	AIF1L (ENSG00000126878) #19	LAMC3 (ENSG00000050555) #20	FIBCD1 (ENSG00000130720) #21	QRFP (ENSG00000188710) #22	ENSG00000288570 #25	ABL1 (ENSG00000097007) #24	EXOSC2 (ENSG00000130713) ##26	PRDM12 (ENSG00000130711) #27	FUBP3 (ENSG00000107164) #28	ASS1 (ENSG00000130707) #29	HMCN2 (ENSG00000148357) #30	NCS1 (ENSG00000107130)	GPR107 (ENSG00000148358) #32	FNBP1 (ENSG00000187239) #33	USP20 (ENSG00000136878) #34	C9orf78 (ENSG00000136819) #35	TOR1A (ENSG00000136827) #36	TOR1B (ENSG00000136816) #37	PTGES (ENSG00000148344)
Gorilla	MODERN SPECIES	22	ENSGGOG00000036257	ENSGGOG00000039160	RAPGEF1 (ENSGGOG00000008226) #11	PRRT1B (ENSGGOG00000026372) #12	UCK1 (ENSGGOG00000012550) #13	ENSGGOG00000036394	POMT1 (ENSGGOG00000012525) #14	ENSGGOG00000041833	PRRC2B (ENSGGOG00000012502) #15	PLPP7 (ENSGGOG00000017173) #16	FAM78A (ENSGGOG00000017172) #17	NUP214 (ENSGGOG00000017169) #18	AIF1L (ENSGGOG00000017168) #19	LAMC3 (ENSGGOG00000017164) #20	FIBCD1 (ENSGGOG00000010605) #21	QRFP (ENSGGOG00000010600) #22	ABL1 (ENSGGOG00000010586) #24	EXOSC2 (ENSGGOG00000010578) ##26	PRDM12 (ENSGGOG00000010568) #27	FUBP3 (ENSGGOG00000011318) #28	ENSGGOG00000039090	ASS1 (ENSGGOG00000010228) #29	HMCN2 (ENSGGOG00000010199) #30	ENSGGOG00000001210 #31	GPR107 (ENSGGOG00000001256) #32	FNBP1 (ENSGGOG00000003548) #33	USP20 (ENSGGOG00000003539) #34	C9orf78 (ENSGGOG00000013358) #35	TOR1A (ENSGGOG00000013356) #36	TOR1B (ENSGGOG00000013351) #37	PTGES (ENSGGOG00000040376)
Orangutan	MODERN SPECIES	22	TTF1 (ENSPPYG00000019709) #7	SETX (ENSPPYG00000019708) #8	NTNG2 (ENSPPYG00000019707) #9	MED27 (ENSPPYG00000019706) #10	RAPGEF1 (ENSPPYG00000019705) #11	PRRT1B (ENSPPYG00000041277) #12	UCK1 (ENSPPYG00000019704) #13	POMT1 (ENSPPYG00000019703) #14	PRRC2B (ENSPPYG00000019702) #15	PLPP7 (ENSPPYG00000019701) #16	FAM78A (ENSPPYG00000019700) #17	NUP214 (ENSPPYG00000019699) #18	AIF1L (ENSPPYG00000019698) #19	LAMC3 (ENSPPYG00000019697) #20	FIBCD1 (ENSPPYG00000019871) #21	ENSPPYG00000041307 #22	ABL1 (ENSPPYG00000041735) #24	ENSPPYG00000031031 #25	EXOSC2 (ENSPPYG00000019695) ##26	PRDM12 (ENSPPYG00000019694) #27	FUBP3 (ENSPPYG00000019693) #28	ASS1 (ENSPPYG00000019692) #29	HMCN2 (ENSPPYG00000036670) #30	NCS1 (ENSPPYG00000030119)	GPR107 (ENSPPYG00000019688) #32	FNBP1 (ENSPPYG00000019687) #33	USP20 (ENSPPYG00000019686) #34	C9H9orf78 (ENSPPYG00000019685) #35	TOR1A (ENSPPYG00000019684) #36	TOR1B (ENSPPYG00000019683) #37	ENSPPYG00000038329
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00910000148028	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.c.a.b.a ##29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00910000146910	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a.i #37
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00910000148028	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.c.a.b.a ##29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00910000146910	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a.i #37
Marmoset	MODERN SPECIES		NTNG2 (ENSCJAG00000018288) #9	ENSCJAG00000085067	MED27 (ENSCJAG00000018305) #10	RAPGEF1 (ENSCJAG00000008301) #11	PRRT1B (ENSCJAG00000042543) #12	UCK1 (ENSCJAG00000008370) #13	POMT1 (ENSCJAG00000008387) #14	PRRC2B (ENSCJAG00000008416) #15	ENSCJAG00000075695	PLPP7 (ENSCJAG00000008460) #16	FAM78A (ENSCJAG00000056875) #17	NUP214 (ENSCJAG00000008476) #18	AIF1L (ENSCJAG00000082553) #19	LAMC3 (ENSCJAG00000008567) #20	FIBCD1 (ENSCJAG00000070440) #21	QRFP (ENSCJAG00000023270) #22	ABL1 (ENSCJAG00000020525) #24	ENSCJAG00000087080 #25	EXOSC2 (ENSCJAG00000020537) #26	PRDM12 (ENSCJAG00000081665) #27	FUBP3 (ENSCJAG00000020542) #28	ENSCJAG00000020554 ##29	HMCN2 (ENSCJAG00000020578) #30	ENSCJAG00000020388 #31	GPR107 (ENSCJAG00000020376) #32	FNBP1 (ENSCJAG00000020360) #33	USP20 (ENSCJAG00000020348) #34	ENSCJAG00000020318 #35	TOR1A (ENSCJAG00000020346) #36	TOR1B (ENSCJAG00000020343) #37	PTGES (ENSCJAG00000086828)
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000165095	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Greater bamboo lemur	MODERN SPECIES	638						UCK1 (ENSPSMG00000017613) #13	POMT1 (ENSPSMG00000017780) #14	PRRC2B (ENSPSMG00000018172) #15	PLPP7 (ENSPSMG00000018572) #16	FAM78A (ENSPSMG00000018576) #17	NUP214 (ENSPSMG00000018673) #18	ENSPSMG00000018705	AIF1L (ENSPSMG00000018725) #19	LAMC3 (ENSPSMG00000018744) #20	FIBCD1 (ENSPSMG00000018761) #21	QRFP (ENSPSMG00000018767) #22	ABL1 (ENSPSMG00000018845) #24	EXOSC2 (ENSPSMG00000018996) #26	PRDM12 (ENSPSMG00000019030) #27	FUBP3 (ENSPSMG00000019055) #28	ASS1 (ENSPSMG00000019105) #29	HMCN2 (ENSPSMG00000019168) #30	GPR107 (ENSPSMG00000019182) #32	FNBP1 (ENSPSMG00000019223) #33	USP20 (ENSPSMG00000019349) #34	C9orf78 (ENSPSMG00000019422) #35	TOR1A (ENSPSMG00000019434) #36	TOR1B (ENSPSMG00000019444) #37	PTGES (ENSPSMG00000019452)	PRRX2 (ENSPSMG00000019459)	ASB6 (ENSPSMG00000019504)
Mouse lemur	MODERN SPECIES	1	ENSMICG00000032240	SETX (ENSMICG00000033597) #8	NTNG2 (ENSMICG00000003678) #9	MED27 (ENSMICG00000003670) #10	ENSMICG00000031134	RAPGEF1 (ENSMICG00000006835) #11	PRRT1B (ENSMICG00000044047) #12	UCK1 (ENSMICG00000004903) #13	POMT1 (ENSMICG00000004891) #14	PRRC2B (ENSMICG00000004880) #15	PLPP7 (ENSMICG00000034614) #16	FAM78A (ENSMICG00000007812) #17	NUP214 (ENSMICG00000007790) #18	LAMC3 (ENSMICG00000045226) #20	FIBCD1 (ENSMICG00000031437) #21	QRFP (ENSMICG00000015518) #22	ABL1 (ENSMICG00000015507) #24	EXOSC2 (ENSMICG00000015495) #26	PRDM12 (ENSMICG00000015480) #27	ENSMICG00000015452 #28	ASS1 (ENSMICG00000013307) #29	HMCN2 (ENSMICG00000030080) #30	NCS1 (ENSMICG00000041760)	GPR107 (ENSMICG00000009620) #32	FNBP1 (ENSMICG00000009605) #33	USP20 (ENSMICG00000016384) #34	ENSMICG00000009596 #35	TOR1A (ENSMICG00000009593) #36	TOR1B (ENSMICG00000009585) #37	PTGES (ENSMICG00000035671)	PRRX2 (ENSMICG00000028857)
Bushbaby	MODERN SPECIES	202	TTF1 (ENSOGAG00000009611) #7	SETX (ENSOGAG00000013387) #8	NTNG2 (ENSOGAG00000028768) #9	MED27 (ENSOGAG00000004158) #10	RAPGEF1 (ENSOGAG00000004147) #11	ENSOGAG00000028797 #13	POMT1 (ENSOGAG00000012801) #14	PRRC2B (ENSOGAG00000012796) #15	PLPP7 (ENSOGAG00000000761) #16	FAM78A (ENSOGAG00000034553) #17	NUP214 (ENSOGAG00000016762) #18	ENSOGAG00000034525	ENSOGAG00000016759 #19	LAMC3 (ENSOGAG00000016745) #20	FIBCD1 (ENSOGAG00000007565) #21	QRFP (ENSOGAG00000031928) #22	ABL1 (ENSOGAG00000007562) #24	EXOSC2 (ENSOGAG00000007558) #26	PRDM12 (ENSOGAG00000007557) #27	FUBP3 (ENSOGAG00000007555) #28	ASS1 (ENSOGAG00000028692) #29	ENSOGAG00000026452	ENSOGAG00000028509 #30	ENSOGAG00000031371 #30	ENSOGAG00000026068	ENSOGAG00000024831 #31	GPR107 (ENSOGAG00000009786) #32	FNBP1 (ENSOGAG00000034453) #33	USP20 (ENSOGAG00000009775) #34	C9orf78 (ENSOGAG00000009770) #35	TOR1A (ENSOGAG00000009766) #36
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Glires	ANCESTRAL SPECIES	9	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Muroidea	ANCESTRAL SPECIES	1	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Cricetidae	ANCESTRAL SPECIES	12	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Cricetinae	ANCESTRAL SPECIES	1	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Golden Hamster	MODERN SPECIES	809															Fibcd1 (ENSMAUG00000019646) #21	Qrfp (ENSMAUG00000001723) #22	ENSMAUG00000016918	Abl1 (ENSMAUG00000019708) #24	Exosc2 (ENSMAUG00000008299) #26	Prdm12 (ENSMAUG00000013040) #27	Fubp3 (ENSMAUG00000012513) #28	Ass1 (ENSMAUG00000013037) #29	Hmcn2 (ENSMAUG00000019134) #30	ENSMAUG00000018907	ENSMAUG00000008220	Gpr107 (ENSMAUG00000020250) #32	Fnbp1 (ENSMAUG00000016222) #33	Usp20 (ENSMAUG00000009267) #34	BC005624 (ENSMAUG00000021586) #35	Tor1a (ENSMAUG00000002165) #36	Tor1b (ENSMAUG00000019063) #37
Chinese hamster chok1gshd	MODERN SPECIES	188	Lcn2 (ENSCGRG00001012253)	Bbln (ENSCGRG00001011837)	Ciz1 (ENSCGRG00001014777)	Dnm1 (ENSCGRG00001011557)	Golga2 (ENSCGRG00001024588)	Swi5 (ENSCGRG00001005842)	ENSCGRG00001004922 #13	Pomt1 (ENSCGRG00001019065) #14	Prrc2b (ENSCGRG00001013428) #15	Plpp7 (ENSCGRG00001007465) #16	Fam78a (ENSCGRG00001004596) #17	Nup214 (ENSCGRG00001002215) #18	Aif1l (ENSCGRG00001005912) #19	Lamc3 (ENSCGRG00001012684) #20	Fibcd1 (ENSCGRG00001015213) #21	Qrfp (ENSCGRG00001002494) #22	Abl1 (ENSCGRG00001024699) #24	Exosc2 (ENSCGRG00001013981) #26	Prdm12 (ENSCGRG00001015005) #27	Fubp3 (ENSCGRG00001011076) #28	Ass1 (ENSCGRG00001024543) #29	Hmcn2 (ENSCGRG00001013838) #30	Ncs1 (ENSCGRG00001023742)	Gpr107 (ENSCGRG00001021890) #32	Fnbp1 (ENSCGRG00001023502) #33	Usp20 (ENSCGRG00001007813) #34	BC005624 (ENSCGRG00001024600) #35	Tor1a (ENSCGRG00001024352) #36	Tor1b (ENSCGRG00001023992) #37	Ptges (ENSCGRG00001024200)	Prrx2 (ENSCGRG00001023907)
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Prairie vole	MODERN SPECIES	12	Lcn2 (ENSMOCG00000017240)	Bbln (ENSMOCG00000006322)	ENSMOCG00000009560	Dnm1 (ENSMOCG00000012359)	Golga2 (ENSMOCG00000004584)	Swi5 (ENSMOCG00000016692)	Uck1 (ENSMOCG00000021975) #13	Pomt1 (ENSMOCG00000022108) #14	Prrc2b (ENSMOCG00000007990) #15	Plpp7 (ENSMOCG00000014865) #16	Fam78a (ENSMOCG00000016168) #17	Nup214 (ENSMOCG00000022169) #18	Aif1l (ENSMOCG00000017527) #19	Lamc3 (ENSMOCG00000021265) #20	Fibcd1 (ENSMOCG00000022095) #21	Qrfp (ENSMOCG00000022423) #22	ENSMOCG00000006542 #24	Exosc2 (ENSMOCG00000008262) #26	Prdm12 (ENSMOCG00000021026) #27	Fubp3 (ENSMOCG00000005635) #28	ENSMOCG00000001087	ENSMOCG00000014563 #29	Hmcn2 (ENSMOCG00000021220) #30	Ncs1 (ENSMOCG00000019199)	Gpr107 (ENSMOCG00000004618) #32	Fnbp1 (ENSMOCG00000015891) #33	ENSMOCG00000018660	Usp20 (ENSMOCG00000007792) #34	BC005624 (ENSMOCG00000017143) #35	Tor1a (ENSMOCG00000018560) #36	Tor1b (ENSMOCG00000022871) #37
Northern American deer mouse	MODERN SPECIES	17	Lcn2 (ENSPEMG00000007881)	Bbln (ENSPEMG00000024928)	Ciz1 (ENSPEMG00000002769)	Dnm1 (ENSPEMG00000012357)	Golga2 (ENSPEMG00000010366)	Swi5 (ENSPEMG00000001958)	Uck1 (ENSPEMG00000008608) #13	Pomt1 (ENSPEMG00000011414) #14	Prrc2b (ENSPEMG00000006196) #15	Plpp7 (ENSPEMG00000029234) #16	Fam78a (ENSPEMG00000025215) #17	Nup214 (ENSPEMG00000009581) #18	Aif1l (ENSPEMG00000006941) #19	Lamc3 (ENSPEMG00000004694) #20	Fibcd1 (ENSPEMG00000028513) #21	Qrfp (ENSPEMG00000009404) #22	Abl1 (ENSPEMG00000024677) #24	ENSPEMG00000001904	Exosc2 (ENSPEMG00000006345) #26	Prdm12 (ENSPEMG00000009969) #27	Fubp3 (ENSPEMG00000019195) #28	Ass1 (ENSPEMG00000017238) #29	Hmcn2 (ENSPEMG00000011093) #30	Ncs1 (ENSPEMG00000009081)	Gpr107 (ENSPEMG00000011641) #32	Fnbp1 (ENSPEMG00000005382) #33	Usp20 (ENSPEMG00000017617) #34	BC005624 (ENSPEMG00000013405) #35	Tor1a (ENSPEMG00000017473) #36	Tor1b (ENSPEMG00000015643) #37	Ptges (ENSPEMG00000026928)
Murinae	ANCESTRAL SPECIES	1	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Mus	ANCESTRAL SPECIES	1	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Mus_A	ANCESTRAL SPECIES		ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Mus_B	ANCESTRAL SPECIES	1	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Mouse	MODERN SPECIES	11	Lcn2 (ENSMUSG00000026822)	Bbln (ENSMUSG00000039195)	Ciz1 (ENSMUSG00000039205)	Dnm1 (ENSMUSG00000026825)	Golga2 (ENSMUSG00000002546)	Swi5 (ENSMUSG00000044627)	Uck1 (ENSMUSG00000002550) #13	Pomt1 (ENSMUSG00000039254) #14	Prrc2b (ENSMUSG00000039262) #15	Plpp7 (ENSMUSG00000051373) #16	Fam78a (ENSMUSG00000050592) #17	Nup214 (ENSMUSG00000001855) #18	Aif1l (ENSMUSG00000001864) #19	Lamc3 (ENSMUSG00000026840) #20	Fibcd1 (ENSMUSG00000026841) #21	Qrfp (ENSMUSG00000043102) #22	Gm56303 (ENSMUSG00000118600)	Abl1 (ENSMUSG00000026842) #24	Exosc2 (ENSMUSG00000039356) #26	Prdm12 (ENSMUSG00000079466) #27	Fubp3 (ENSMUSG00000026843) #28	Ass1 (ENSMUSG00000076441) #29	Hmcn2 (ENSMUSG00000055632) #30	Ncs1 (ENSMUSG00000062661)	Gpr107 (ENSMUSG00000000194) #32	Fnbp1 (ENSMUSG00000075415) #33	Usp20 (ENSMUSG00000026854) #34	BC005624 (ENSMUSG00000026851) #35	Tor1a (ENSMUSG00000026849) #36	Tor1b (ENSMUSG00000026848) #37	Ptges (ENSMUSG00000050737)
Mus_C	ANCESTRAL SPECIES		ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
spretus	MODERN SPECIES	11	Lcn2 (MGP_SPRETEiJ_G0024349)	Bbln (MGP_SPRETEiJ_G0024348)	Ciz1 (MGP_SPRETEiJ_G0024347)	Dnm1 (MGP_SPRETEiJ_G0024346)	Golga2 (MGP_SPRETEiJ_G0024345)	Swi5 (MGP_SPRETEiJ_G0024344)	Uck1 (MGP_SPRETEiJ_G0024343) #13	Pomt1 (MGP_SPRETEiJ_G0024342) #14	Prrc2b (MGP_SPRETEiJ_G0024341) #15	Plpp7 (MGP_SPRETEiJ_G0024340) #16	Fam78a (MGP_SPRETEiJ_G0024339) #17	Nup214 (MGP_SPRETEiJ_G0024338) #18	Aif1l (MGP_SPRETEiJ_G0024337) #19	Lamc3 (MGP_SPRETEiJ_G0024336) #20	Fibcd1 (MGP_SPRETEiJ_G0024335) #21	Qrfp (MGP_SPRETEiJ_G0024334) #22	Abl1 (MGP_SPRETEiJ_G0024333) #24	Exosc2 (MGP_SPRETEiJ_G0024332) #26	Prdm12 (MGP_SPRETEiJ_G0024331) #27	Fubp3 (MGP_SPRETEiJ_G0024330) #28	Ass1 (MGP_SPRETEiJ_G0024329) #29	Hmcn2 (MGP_SPRETEiJ_G0024328) #30	MGP_SPRETEiJ_G0024327	Gpr107 (MGP_SPRETEiJ_G0024326) #32	Fnbp1 (MGP_SPRETEiJ_G0024325) #33	Usp20 (MGP_SPRETEiJ_G0024324) #34	BC005624 (MGP_SPRETEiJ_G0024323) #35	Tor1b (MGP_SPRETEiJ_G0024322) #37	Tor1a (MGP_SPRETEiJ_G0024321) #36	Ptges (MGP_SPRETEiJ_G0024320)	Prrx2 (MGP_SPRETEiJ_G0024319)
Steppe mouse	MODERN SPECIES	2914														ENSMSIG00000019685 #20	Fibcd1 (ENSMSIG00000019790) #21	Qrfp (ENSMSIG00000019803) #22	Abl1 (ENSMSIG00000019810) #24	Exosc2 (ENSMSIG00000019857) #26	Prdm12 (ENSMSIG00000019870) #27	Fubp3 (ENSMSIG00000019874) #28	Ass1 (ENSMSIG00000019909) #29	Hmcn2 (ENSMSIG00000019934) #30	Ncs1 (ENSMSIG00000020106)	Gpr107 (ENSMSIG00000020135) #32	Fnbp1 (ENSMSIG00000020195) #33	Usp20 (ENSMSIG00000020970) #34	BC005624 (ENSMSIG00000021188) #35	Tor1a (ENSMSIG00000021233) #36	Tor1b (ENSMSIG00000021248) #37	Ptges (ENSMSIG00000021259)	Prrx2 (ENSMSIG00000021265)
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0023432	Bbln (MGP_CAROLIEiJ_G0023431)	Ciz1 (MGP_CAROLIEiJ_G0023430)	Dnm1 (MGP_CAROLIEiJ_G0023429)	Golga2 (MGP_CAROLIEiJ_G0023428)	Swi5 (MGP_CAROLIEiJ_G0023427)	Uck1 (MGP_CAROLIEiJ_G0023426) #13	Pomt1 (MGP_CAROLIEiJ_G0023425) #14	Prrc2b (MGP_CAROLIEiJ_G0023424) #15	Plpp7 (MGP_CAROLIEiJ_G0023423) #16	Fam78a (MGP_CAROLIEiJ_G0023422) #17	Nup214 (MGP_CAROLIEiJ_G0023421) #18	Aif1l (MGP_CAROLIEiJ_G0023420) #19	Lamc3 (MGP_CAROLIEiJ_G0023419) #20	Fibcd1 (MGP_CAROLIEiJ_G0023418) #21	Qrfp (MGP_CAROLIEiJ_G0023417) #22	Abl1 (MGP_CAROLIEiJ_G0023416) #24	Exosc2 (MGP_CAROLIEiJ_G0023415) #26	Prdm12 (MGP_CAROLIEiJ_G0023414) #27	Fubp3 (MGP_CAROLIEiJ_G0023413) #28	MGP_CAROLIEiJ_G0023412 #29	Hmcn2 (MGP_CAROLIEiJ_G0023411) #30	Ncs1 (MGP_CAROLIEiJ_G0023410)	Gpr107 (MGP_CAROLIEiJ_G0023409) #32	Fnbp1 (MGP_CAROLIEiJ_G0023408) #33	Usp20 (MGP_CAROLIEiJ_G0023407) #34	BC005624 (MGP_CAROLIEiJ_G0023406) #35	Tor1a (MGP_CAROLIEiJ_G0023405) #36	Tor1b (MGP_CAROLIEiJ_G0023404) #37	Ptges (MGP_CAROLIEiJ_G0023403)	Prrx2 (MGP_CAROLIEiJ_G0023402)
Shrew mouse	MODERN SPECIES	16	MGP_PahariEiJ_G0024889	Bbln (MGP_PahariEiJ_G0024888)	Ciz1 (MGP_PahariEiJ_G0024887)	Dnm1 (MGP_PahariEiJ_G0024886)	Golga2 (MGP_PahariEiJ_G0024885)	MGP_PahariEiJ_G0024884	Uck1 (MGP_PahariEiJ_G0024883) #13	Pomt1 (MGP_PahariEiJ_G0024882) #14	Prrc2b (MGP_PahariEiJ_G0024881) #15	Plpp7 (MGP_PahariEiJ_G0024880) #16	Fam78a (MGP_PahariEiJ_G0024879) #17	Nup214 (MGP_PahariEiJ_G0024878) #18	Aif1l (MGP_PahariEiJ_G0024877) #19	Lamc3 (MGP_PahariEiJ_G0024876) #20	Fibcd1 (MGP_PahariEiJ_G0024875) #21	Qrfp (MGP_PahariEiJ_G0024874) #22	Abl1 (MGP_PahariEiJ_G0024873) #24	Exosc2 (MGP_PahariEiJ_G0024872) #26	Prdm12 (MGP_PahariEiJ_G0024871) #27	Fubp3 (MGP_PahariEiJ_G0024870) #28	Ass1 (MGP_PahariEiJ_G0024869) #29	MGP_PahariEiJ_G0024868 #30	Ncs1 (MGP_PahariEiJ_G0024867)	Gpr107 (MGP_PahariEiJ_G0024866) #32	Fnbp1 (MGP_PahariEiJ_G0024865) #33	Usp20 (MGP_PahariEiJ_G0024864) #34	BC005624 (MGP_PahariEiJ_G0024863) #35	Tor1a (MGP_PahariEiJ_G0024862) #36	Tor1b (MGP_PahariEiJ_G0024861) #37	Ptges (MGP_PahariEiJ_G0024860)	MGP_PahariEiJ_G0024859
Rat	MODERN SPECIES	13	Lcn2 (ENSRNOG00000013973)	Bbln (ENSRNOG00000022681)	Ciz1 (ENSRNOG00000013442)	Dnm1 (ENSRNOG00000033835)	Golga2 (ENSRNOG00000011884)	Swi5 (ENSRNOG00000022860)	Uck1 (ENSRNOG00000011467) #13	Pomt1 (ENSRNOG00000010477) #14	Prrc2b (ENSRNOG00000010217) #15	Plpp7 (ENSRNOG00000010068) #16	Fam78a (ENSRNOG00000023352) #17	Nup214 (ENSRNOG00000023393) #18	Aif1l (ENSRNOG00000009951) #19	Lamc3 (ENSRNOG00000059507) #20	Fibcd1 (ENSRNOG00000009735) #21	Qrfp (ENSRNOG00000046473) #22	Abl1 (ENSRNOG00000047356) #24	Exosc2 (ENSRNOG00000009245) #26	Prdm12 (ENSRNOG00000009218) #27	Fubp3 (ENSRNOG00000009139) #28	Ass1 (ENSRNOG00000008837) #29	Hmcn2 (ENSRNOG00000064166) #30	LOC103691761 (ENSRNOG00000062268)	Ncs1 (ENSRNOG00000064701) #31	Gpr107 (ENSRNOG00000023589) #32	Fnbp1 (ENSRNOG00000008258) #33	Usp20 (ENSRNOG00000007710) #34	C3h9orf78 (ENSRNOG00000007532) #35	Tor1a (ENSRNOG00000006894) #36	Tor1b (ENSRNOG00000006435) #37	Asb6 (ENSRNOG00000024786)
Upper Galilee mountains blind mole rat	MODERN SPECIES	513	Bbln (ENSNGAG00000009999)	ENSNGAG00000016410	Dnm1 (ENSNGAG00000005939)	Golga2 (ENSNGAG00000001473)	ENSNGAG00000010814	Uck1 (ENSNGAG00000016330) #13	Pomt1 (ENSNGAG00000008179) #14	Prrc2b (ENSNGAG00000000491) #15	Plpp7 (ENSNGAG00000014073) #16	Fam78a (ENSNGAG00000015817) #17	ENSNGAG00000000413	ENSNGAG00000003978	ENSNGAG00000008685 #19	Lamc3 (ENSNGAG00000014328) #20	Fibcd1 (ENSNGAG00000012641) #21	Qrfp (ENSNGAG00000014842) #22	ENSNGAG00000015019	Exosc2 (ENSNGAG00000019383) #26	Prdm12 (ENSNGAG00000018480) #27	Fubp3 (ENSNGAG00000016562) #28	Ass1 (ENSNGAG00000001086) #29	Hmcn2 (ENSNGAG00000000330) #30	Ncs1 (ENSNGAG00000014453)	Gpr107 (ENSNGAG00000011379) #32	Fnbp1 (ENSNGAG00000012937) #33	ENSNGAG00000007690 #34	BC005624 (ENSNGAG00000004959) #35	Tor1a (ENSNGAG00000008009) #36	Tor1b (ENSNGAG00000014937) #37	Ptges (ENSNGAG00000011958)	Prrx2 (ENSNGAG00000015873)
Lesser Egyptian jerboa	MODERN SPECIES	216													Aif1l (ENSJJAG00000016566) #19	Lamc3 (ENSJJAG00000024108) #20	Fibcd1 (ENSJJAG00000000435) #21	Qrfp (ENSJJAG00000000766) #22	ENSJJAG00000001721	ENSJJAG00000002376	Exosc2 (ENSJJAG00000003188) #26	Prdm12 (ENSJJAG00000005424) #27	Fubp3 (ENSJJAG00000009992) #28	ENSJJAG00000011740	Ass1 (ENSJJAG00000012217) #29	Hmcn2 (ENSJJAG00000015957) #30	ENSJJAG00000006586 #31	Gpr107 (ENSJJAG00000011368) #32	Fnbp1 (ENSJJAG00000014760) #33	ENSJJAG00000018480 #34	BC005624 (ENSJJAG00000019276) #35	Tor1a (ENSJJAG00000020493) #36	Tor1b (ENSJJAG00000021809) #37
Kangaroo rat	MODERN SPECIES	374	Cfap77 (ENSDORG00000008723)	ENSDORG00000030223	Ntng2 (ENSDORG00000015371) #9	Med27 (ENSDORG00000014279) #10	Rapgef1 (ENSDORG00000003580) #11	Uck1 (ENSDORG00000025358) #13	Pomt1 (ENSDORG00000014415) #14	Prrc2b (ENSDORG00000005945) #15	Plpp7 (ENSDORG00000007637) #16	Fam78a (ENSDORG00000027116) #17	ENSDORG00000027131 #18	ENSDORG00000028083	Aif1l (ENSDORG00000003641) #19	Lamc3 (ENSDORG00000014599) #20	Fibcd1 (ENSDORG00000001517) #21	Qrfp (ENSDORG00000006119) #22	ENSDORG00000026471	Exosc2 (ENSDORG00000009238) #26	ENSDORG00000027073	ENSDORG00000030247 #28	Ass1 (ENSDORG00000010865) #29	Hmcn2 (ENSDORG00000027158) #30	ENSDORG00000013807 #31	Gpr107 (ENSDORG00000006286) #32	Fnbp1 (ENSDORG00000000783) #33	Usp20 (ENSDORG00000000782) #34	BC005624 (ENSDORG00000000781) #35	Tor1a (ENSDORG00000000780) #36	Tor1b (ENSDORG00000000778) #37	Ptges (ENSDORG00000003233)	Prrx2 (ENSDORG00000003232)
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00910000148672	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Hystricomorpha_b	ANCESTRAL SPECIES	36	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Long-tailed chinchilla	MODERN SPECIES	220	ENSCLAG00000012676 #7	SETX (ENSCLAG00000012582) #8	NTNG2 (ENSCLAG00000010283) #9	MED27 (ENSCLAG00000010715) #10	RAPGEF1 (ENSCLAG00000007111) #11	UCK1 (ENSCLAG00000006376) #13	POMT1 (ENSCLAG00000005548) #14	PRRC2B (ENSCLAG00000006317) #15	PLPP7 (ENSCLAG00000005966) #16	FAM78A (ENSCLAG00000005607) #17	ENSCLAG00000005455 #18	ENSCLAG00000005147	AIF1L (ENSCLAG00000004225) #19	LAMC3 (ENSCLAG00000011206) #20	FIBCD1 (ENSCLAG00000016865) #21	QRFP (ENSCLAG00000015339) #22	ABL1 (ENSCLAG00000012898) #24	EXOSC2 (ENSCLAG00000006195) #26	PRDM12 (ENSCLAG00000005499) #27	FUBP3 (ENSCLAG00000009005) #28	ASS1 (ENSCLAG00000009951) #29	ENSCLAG00000009788 #31	GPR107 (ENSCLAG00000008972) #32	FNBP1 (ENSCLAG00000006794) #33	USP20 (ENSCLAG00000005589) #34	C9orf78 (ENSCLAG00000005362) #35	TOR1A (ENSCLAG00000008135) #36	TOR1B (ENSCLAG00000008038) #37
Degu	MODERN SPECIES	164	ENSODEG00000016205	NTNG2 (ENSODEG00000015897) #9	ENSODEG00000017667 #10	RAPGEF1 (ENSODEG00000015868) #11	PRRT1B (ENSODEG00000016405) #12	ENSODEG00000016290 #13	POMT1 (ENSODEG00000016799) #14	PRRC2B (ENSODEG00000016621) #15	ENSODEG00000016604 #16	FAM78A (ENSODEG00000016443) #17	ENSODEG00000016298 #18	ENSODEG00000016268	AIF1L (ENSODEG00000016484) #19	LAMC3 (ENSODEG00000016310) #20	FIBCD1 (ENSODEG00000016757) #21	QRFP (ENSODEG00000017359) #22	ENSODEG00000016893	ENSODEG00000016880 #26	PRDM12 (ENSODEG00000016282) #27	ENSODEG00000016150	ENSODEG00000016805 #28	ENSODEG00000016506 #29	HMCN2 (ENSODEG00000017140) #30	NCS1 (ENSODEG00000016264)	GPR107 (ENSODEG00000016679) #32	FNBP1 (ENSODEG00000016898) #33	USP20 (ENSODEG00000016809) #34	ENSODEG00000017319 #35	TOR1A (ENSODEG00000016914) #36	TOR1B (ENSODEG00000016942) #37	PTGES (ENSODEG00000017072)
Guinea pig	MODERN SPECIES	27	ENSCPOG00000021944 #7	SETX (ENSCPOG00000001492) #8	NTNG2 (ENSCPOG00000024399) #9	MED27 (ENSCPOG00000038756) #10	RAPGEF1 (ENSCPOG00000009942) #11	PRRT1B (ENSCPOG00000022704) #12	UCK1 (ENSCPOG00000038192) #13	POMT1 (ENSCPOG00000020217) #14	PRRC2B (ENSCPOG00000009890) #15	PLPP7 (ENSCPOG00000036051) #16	FAM78A (ENSCPOG00000033676) #17	ENSCPOG00000003123	AIF1L (ENSCPOG00000014734) #19	LAMC3 (ENSCPOG00000004395) #20	FIBCD1 (ENSCPOG00000006219) #21	QRFP (ENSCPOG00000031430) #22	ABL1 (ENSCPOG00000005903) #24	EXOSC2 (ENSCPOG00000005902) #26	PRDM12 (ENSCPOG00000005901) #27	FUBP3 (ENSCPOG00000010315) #28	ASS1 (ENSCPOG00000024091) #29	HMCN2 (ENSCPOG00000013220) #30	ENSCPOG00000030593 #31	GPR107 (ENSCPOG00000006007) #32	FNBP1 (ENSCPOG00000001166) #33	USP20 (ENSCPOG00000026238) #34	C9orf78 (ENSCPOG00000009285) #35	TOR1A (ENSCPOG00000009275) #36	TOR1B (ENSCPOG00000025420) #37	PTGES (ENSCPOG00000031288)	PRRX2 (ENSCPOG00000021821)
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000013502 #7	SETX (ENSHGLG00000010385) #8	NTNG2 (ENSHGLG00000012731) #9	MED27 (ENSHGLG00000011262) #10	RAPGEF1 (ENSHGLG00000012902) #11	PRRT1B (ENSHGLG00000014409) #12	UCK1 (ENSHGLG00000014736) #13	POMT1 (ENSHGLG00000016861) #14	ENSHGLG00000036647	PRRC2B (ENSHGLG00000010565) #15	PLPP7 (ENSHGLG00000010930) #16	FAM78A (ENSHGLG00000049348) #17	NUP214 (ENSHGLG00000012544) #18	ENSHGLG00000043388 #19	FIBCD1 (ENSHGLG00000010751) #21	QRFP (ENSHGLG00000043180) #22	ABL1 (ENSHGLG00000011775) #24	ENSHGLG00000037525	ENSHGLG00000034423	EXOSC2 (ENSHGLG00000012834) #26	PRDM12 (ENSHGLG00000013939) #27	FUBP3 (ENSHGLG00000014381) #28	ASS1 (ENSHGLG00000010826) #29	ENSHGLG00000041974 #30	NCS1 (ENSHGLG00000014153)	GPR107 (ENSHGLG00000018735) #32	FNBP1 (ENSHGLG00000011382) #33	USP20 (ENSHGLG00000011412) #34	ENSHGLG00000042396 #35	TOR1A (ENSHGLG00000012267) #36	TOR1B (ENSHGLG00000037837) #37
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Marmotini	ANCESTRAL SPECIES	1	ENSGT00390000014476	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787.c #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Alpin marmot	MODERN SPECIES	47	CFAP77 (ENSMMMG00000011095)	TTF1 (ENSMMMG00000011133) #7	SETX (ENSMMMG00000011147) #8	NTNG2 (ENSMMMG00000011377) #9	MED27 (ENSMMMG00000011517) #10	RAPGEF1 (ENSMMMG00000011529) #11	UCK1 (ENSMMMG00000011656) #13	POMT1 (ENSMMMG00000011692) #14	PRRC2B (ENSMMMG00000011717) #15	PLPP7 (ENSMMMG00000011773) #16	FAM78A (ENSMMMG00000011780) #17	NUP214 (ENSMMMG00000011781) #18	AIF1L (ENSMMMG00000011817) #19	LAMC3 (ENSMMMG00000011837) #20	FIBCD1 (ENSMMMG00000011880) #21	QRFP (ENSMMMG00000011895) #22	ABL1 (ENSMMMG00000011924) #24	EXOSC2 (ENSMMMG00000011926) #26	FUBP3 (ENSMMMG00000011935) #28	ASS1 (ENSMMMG00000012003) #29	HMCN2 (ENSMMMG00000012024) #30	ENSMMMG00000012162 #31	GPR107 (ENSMMMG00000012179) #32	FNBP1 (ENSMMMG00000012220) #33	USP20 (ENSMMMG00000012884) #34	C9orf78 (ENSMMMG00000012948) #35	TOR1A (ENSMMMG00000012961) #36	TOR1B (ENSMMMG00000012963) #37	ENSMMMG00000012968	PRRX2 (ENSMMMG00000012985)	ASB6 (ENSMMMG00000012990)
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00390000014476	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787.c #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Squirrel	MODERN SPECIES	87	CFAP77 (ENSSTOG00000007973)	TTF1 (ENSSTOG00000007957) #7	SETX (ENSSTOG00000021600) #8	NTNG2 (ENSSTOG00000010575) #9	MED27 (ENSSTOG00000008925) #10	RAPGEF1 (ENSSTOG00000002466) #11	UCK1 (ENSSTOG00000004058) #13	POMT1 (ENSSTOG00000004011) #14	PRRC2B (ENSSTOG00000024364) #15	PLPP7 (ENSSTOG00000007982) #16	FAM78A (ENSSTOG00000027424) #17	NUP214 (ENSSTOG00000011636) #18	AIF1L (ENSSTOG00000011627) #19	LAMC3 (ENSSTOG00000011610) #20	FIBCD1 (ENSSTOG00000003601) #21	QRFP (ENSSTOG00000030261) #22	ENSSTOG00000014127	ABL1 (ENSSTOG00000026819) #24	EXOSC2 (ENSSTOG00000005999) #26	PRDM12 (ENSSTOG00000005986) #27	FUBP3 (ENSSTOG00000014105) #28	ASS1 (ENSSTOG00000011597) #29	ENSSTOG00000025494 #31	GPR107 (ENSSTOG00000024511) #32	FNBP1 (ENSSTOG00000013583) #33	USP20 (ENSSTOG00000005418) #34	ENSSTOG00000020630 #35	TOR1A (ENSSTOG00000020075) #36	TOR1B (ENSSTOG00000004915) #37	PTGES (ENSSTOG00000004909)	ASB6 (ENSSTOG00000025302)
Arctic ground squirrel	MODERN SPECIES	44	ENSUPAG00010023191	ENSUPAG00010023190	NEUROD4 (ENSUPAG00010023188)	ENSUPAG00010023187	ENSUPAG00010023186	RAPGEF1 (ENSUPAG00010023174) #11	UCK1 (ENSUPAG00010023170) #13	POMT1 (ENSUPAG00010023169) #14	PRRC2B (ENSUPAG00010019495) #15	PLPP7 (ENSUPAG00010019458) #16	FAM78A (ENSUPAG00010019454) #17	NUP214 (ENSUPAG00010019408) #18	AIF1L (ENSUPAG00010019397) #19	LAMC3 (ENSUPAG00010019336) #20	FIBCD1 (ENSUPAG00010019328) #21	QRFP (ENSUPAG00010019319) #22	ABL1 (ENSUPAG00010019305) #24	EXOSC2 (ENSUPAG00010019297) #26	PRDM12 (ENSUPAG00010019289) #27	FUBP3 (ENSUPAG00010019280) #28	ASS1 (ENSUPAG00010019269) #29	HMCN2 (ENSUPAG00010019173) #30	NCS1 (ENSUPAG00010019150)	GPR107 (ENSUPAG00010019131) #32	FNBP1 (ENSUPAG00010018326) #33	USP20 (ENSUPAG00010018244) #34	C9orf78 (ENSUPAG00010018240) #35	TOR1A (ENSUPAG00010018233) #36	TOR1B (ENSUPAG00010018227) #37	ENSUPAG00010018223	PRRX2 (ENSUPAG00010018215)
Eurasian red squirrel	MODERN SPECIES	6	SETX (ENSSVLG00005017731) #8	NTNG2 (ENSSVLG00005017637) #9	ENSSVLG00005017582	MED27 (ENSSVLG00005017453) #10	RAPGEF1 (ENSSVLG00005016872) #11	PRRT1B (ENSSVLG00005016788) #12	UCK1 (ENSSVLG00005016660) #13	POMT1 (ENSSVLG00005016596) #14	PRRC2B (ENSSVLG00005025635) #15	PLPP7 (ENSSVLG00005025595) #16	FAM78A (ENSSVLG00005025584) #17	NUP214 (ENSSVLG00005025553) #18	AIF1L (ENSSVLG00005025524) #19	LAMC3 (ENSSVLG00005025507) #20	FIBCD1 (ENSSVLG00005025486) #21	QRFP (ENSSVLG00005025477) #22	ABL1 (ENSSVLG00005025464) #24	EXOSC2 (ENSSVLG00005025425) #26	PRDM12 (ENSSVLG00005025390) #27	FUBP3 (ENSSVLG00005025378) #28	ASS1 (ENSSVLG00005025352) #29	ENSSVLG00005025309 #30	NCS1 (ENSSVLG00005025273)	GPR107 (ENSSVLG00005025232) #32	FNBP1 (ENSSVLG00005025181) #33	USP20 (ENSSVLG00005025130) #34	C9orf78 (ENSSVLG00005025097) #35	TOR1A (ENSSVLG00005025074) #36	TOR1B (ENSSVLG00005025056) #37	PTGES (ENSSVLG00005025037)	PRRX2 (ENSSVLG00005025019)
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Suina	ANCESTRAL SPECIES	37	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Chacoan peccary	MODERN SPECIES	887	CFAP77 (ENSCWAG00000005915)	TTF1 (ENSCWAG00000005976) #7	SETX (ENSCWAG00000006034) #8	NTNG2 (ENSCWAG00000006197) #9	MED27 (ENSCWAG00000006239) #10	RAPGEF1 (ENSCWAG00000006397) #11	UCK1 (ENSCWAG00000006666) #13	POMT1 (ENSCWAG00000006722) #14	PRRC2B (ENSCWAG00000006791) #15	PLPP7 (ENSCWAG00000006971) #16	FAM78A (ENSCWAG00000006984) #17	NUP214 (ENSCWAG00000007015) #18	AIF1L (ENSCWAG00000007101) #19	LAMC3 (ENSCWAG00000007153) #20	FIBCD1 (ENSCWAG00000007262) #21	QRFP (ENSCWAG00000007323) #22	ABL1 (ENSCWAG00000007338) #24	EXOSC2 (ENSCWAG00000007402) #26	PRDM12 (ENSCWAG00000007488) #27	FUBP3 (ENSCWAG00000007526) #28	ENSCWAG00000007549	ASS1 (ENSCWAG00000007572) #29	HMCN2 (ENSCWAG00000007654) #30	NCS1 (ENSCWAG00000008387)	GPR107 (ENSCWAG00000008440) #32	FNBP1 (ENSCWAG00000008670) #33	USP20 (ENSCWAG00000008895) #34	C9orf78 (ENSCWAG00000008931) #35	TOR1A (ENSCWAG00000008965) #36	TOR1B (ENSCWAG00000009005) #37	PTGES (ENSCWAG00000009041)
Pig	MODERN SPECIES		TTF1 (ENSSSCG00000005725) #7	SETX (ENSSSCG00000005724) #8	NTNG2 (ENSSSCG00000005723) #9	MED27 (ENSSSCG00000005720) #10	RAPGEF1 (ENSSSCG00000005719) #11	PRRT1B (ENSSSCG00000031465) #12	UCK1 (ENSSSCG00000005717) #13	POMT1 (ENSSSCG00000005716) #14	PRRC2B (ENSSSCG00000005715) #15	PLPP7 (ENSSSCG00000005713) #16	FAM78A (ENSSSCG00000028172) #17	NUP214 (ENSSSCG00000005711) #18	AIF1L (ENSSSCG00000034178) #19	LAMC3 (ENSSSCG00000005710) #20	FIBCD1 (ENSSSCG00000005707) #21	QRFP (ENSSSCG00000005705) #22	ABL1 (ENSSSCG00000005706) #24	EXOSC2 (ENSSSCG00000005704) #26	PRDM12 (ENSSSCG00000005703) #27	FUBP3 (ENSSSCG00000005702) #28	ASS1 (ENSSSCG00000005701) #29	HMCN2 (ENSSSCG00000005699) #30	NCS1 (ENSSSCG00000039311)	GPR107 (ENSSSCG00000038868) #32	FNBP1 (ENSSSCG00000005689) #33	USP20 (ENSSSCG00000024341) #34	C9orf78 (ENSSSCG00000030426) #35	TOR1A (ENSSSCG00000034518) #36	TOR1B (ENSSSCG00000005683) #37	PTGES (ENSSSCG00000005688)	PRRX2 (ENSSSCG00000005680)
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Cetacea	ANCESTRAL SPECIES	9	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a.i #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a.i #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a.i #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a.i #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00390000008195.c	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Narwhal	MODERN SPECIES	312	TTF1 (ENSMMNG00015014693) #7	SETX (ENSMMNG00015014662) #8	NTNG2 (ENSMMNG00015014639) #9	MED27 (ENSMMNG00015014609) #10	RAPGEF1 (ENSMMNG00015014496) #11	PRRT1B (ENSMMNG00015014448) #12	UCK1 (ENSMMNG00015014428) #13	POMT1 (ENSMMNG00015014401) #14	PRRC2B (ENSMMNG00015014308) #15	PLPP7 (ENSMMNG00015014280) #16	FAM78A (ENSMMNG00015014273) #17	NUP214 (ENSMMNG00015014156) #18	ENSMMNG00015014117 #19	LAMC3 (ENSMMNG00015014088) #20	FIBCD1 (ENSMMNG00015014057) #21	QRFP (ENSMMNG00015014048) #22	ABL1 (ENSMMNG00015014013) #24	EXOSC2 (ENSMMNG00015013973) #26	PRDM12 (ENSMMNG00015013947) #27	FUBP3 (ENSMMNG00015013917) #28	ASS1 (ENSMMNG00015013868) #29	HMCN2 (ENSMMNG00015013821) #30	ADI1 (ENSMMNG00015013790)	NCS1 (ENSMMNG00015013771)	GPR107 (ENSMMNG00015013685) #32	FNBP1 (ENSMMNG00015013587) #33	USP20 (ENSMMNG00015013546) #34	C9orf78 (ENSMMNG00015013471) #35	TOR1A (ENSMMNG00015013457) #36	TOR1B (ENSMMNG00015013447) #37	PTGES (ENSMMNG00015013439)
Beluga whale	MODERN SPECIES	19	TTF1 (ENSDLEG00000004956) #7	SETX (ENSDLEG00000005002) #8	NTNG2 (ENSDLEG00000005024) #9	MED27 (ENSDLEG00000005036) #10	RAPGEF1 (ENSDLEG00000005079) #11	PRRT1B (ENSDLEG00000005148) #12	UCK1 (ENSDLEG00000005153) #13	POMT1 (ENSDLEG00000005160) #14	PRRC2B (ENSDLEG00000005193) #15	PLPP7 (ENSDLEG00000005296) #16	FAM78A (ENSDLEG00000005303) #17	NUP214 (ENSDLEG00000005368) #18	AIF1L (ENSDLEG00000005829) #19	LAMC3 (ENSDLEG00000005892) #20	FIBCD1 (ENSDLEG00000006141) #21	ENSDLEG00000006144 #22	ABL1 (ENSDLEG00000006151) #24	EXOSC2 (ENSDLEG00000006167) #26	PRDM12 (ENSDLEG00000006203) #27	FUBP3 (ENSDLEG00000006221) #28	ASS1 (ENSDLEG00000006264) #29	HMCN2 (ENSDLEG00000006312) #30	ENSDLEG00000006488	ENSDLEG00000006497	GPR107 (ENSDLEG00000006525) #32	FNBP1 (ENSDLEG00000006640) #33	USP20 (ENSDLEG00000006766) #34	ENSDLEG00000008329	C9orf78 (ENSDLEG00000008371) #35	TOR1A (ENSDLEG00000008413) #36	TOR1B (ENSDLEG00000008537) #37
Vaquita	MODERN SPECIES	17	NTNG2 (ENSPSNG00000010573) #9	MED27 (ENSPSNG00000010671) #10	RAPGEF1 (ENSPSNG00000010810) #11	PRRT1B (ENSPSNG00000011276) #12	UCK1 (ENSPSNG00000011299) #13	POMT1 (ENSPSNG00000011380) #14	ENSPSNG00000011496 #15	ENSPSNG00000011551	ENSPSNG00000011577 #15	PLPP7 (ENSPSNG00000011611) #16	FAM78A (ENSPSNG00000011642) #17	NUP214 (ENSPSNG00000011681) #18	AIF1L (ENSPSNG00000011812) #19	LAMC3 (ENSPSNG00000011907) #20	FIBCD1 (ENSPSNG00000011963) #21	QRFP (ENSPSNG00000012057) #22	ABL1 (ENSPSNG00000012102) #24	EXOSC2 (ENSPSNG00000012232) #26	PRDM12 (ENSPSNG00000012356) #27	FUBP3 (ENSPSNG00000012440) #28	ASS1 (ENSPSNG00000012505) #29	ENSPSNG00000012578 #30	NCS1 (ENSPSNG00000012964)	ENSPSNG00000013006	GPR107 (ENSPSNG00000013082) #32	FNBP1 (ENSPSNG00000013220) #33	ENSPSNG00000013402	USP20 (ENSPSNG00000013440) #34	ENSPSNG00000013547	TOR1A (ENSPSNG00000013609) #36	TOR1B (ENSPSNG00000013681) #37
Dolphin	MODERN SPECIES	3324															FIBCD1 (ENSTTRG00000015178) #21	QRFP (ENSTTRG00000015177) #22	ABL1 (ENSTTRG00000015170) #24	EXOSC2 (ENSTTRG00000015159) #26	ENSTTRG00000015155	FUBP3 (ENSTTRG00000015138) #28
Blue whale	MODERN SPECIES	17	SETX (ENSBMSG00010021728) #8	NTNG2 (ENSBMSG00010021726) #9	MED27 (ENSBMSG00010021722) #10	ENSBMSG00010021721	RAPGEF1 (ENSBMSG00010020935) #11	UCK1 (ENSBMSG00010020674) #13	POMT1 (ENSBMSG00010020652) #14	PRRC2B (ENSBMSG00010020597) #15	PLPP7 (ENSBMSG00010020571) #16	FAM78A (ENSBMSG00010020562) #17	NUP214 (ENSBMSG00010020505) #18	AIF1L (ENSBMSG00010020435) #19	ENSBMSG00010020414	LAMC3 (ENSBMSG00010020344) #20	FIBCD1 (ENSBMSG00010020307) #21	QRFP (ENSBMSG00010020291) #22	ABL1 (ENSBMSG00010020250) #24	ENSBMSG00010020231 #25	EXOSC2 (ENSBMSG00010020163) #26	PRDM12 (ENSBMSG00010020138) #27	FUBP3 (ENSBMSG00010020125) #28	ASS1 (ENSBMSG00010020073) #29	HMCN2 (ENSBMSG00010019864) #30	NCS1 (ENSBMSG00010019809)	GPR107 (ENSBMSG00010019745) #32	FNBP1 (ENSBMSG00010018996) #33	USP20 (ENSBMSG00010018877) #34	C9orf78 (ENSBMSG00010018839) #35	TOR1A (ENSBMSG00010018817) #36	ENSBMSG00010018792 #37	ENSBMSG00010018780
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Percora_a	ANCESTRAL SPECIES	27	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT01000000214793	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Bos	ANCESTRAL SPECIES	5	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT01000000214793	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Bos_a	ANCESTRAL SPECIES	23	ENSGT00940000159729 #7	ENSGT01100000263569.a.a.b	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Wild yak	MODERN SPECIES	1459				NTNG2 (ENSBMUG00000005163) #9	MED27 (ENSBMUG00000005194) #10	RAPGEF1 (ENSBMUG00000005421) #11	UCK1 (ENSBMUG00000005508) #13	POMT1 (ENSBMUG00000005586) #14	PRRC2B (ENSBMUG00000005654) #15	PLPP7 (ENSBMUG00000005732) #16	FAM78A (ENSBMUG00000005751) #17	NUP214 (ENSBMUG00000005823) #18	AIF1L (ENSBMUG00000005863) #19	LAMC3 (ENSBMUG00000005890) #20	FIBCD1 (ENSBMUG00000005929) #21	QRFP (ENSBMUG00000005940) #22	ABL1 (ENSBMUG00000005981) #24	EXOSC2 (ENSBMUG00000006034) #26	PRDM12 (ENSBMUG00000006080) #27
Domestic yak	MODERN SPECIES	28	CFAP77 (ENSBGRG00000014588)	TTF1 (ENSBGRG00000014543) #7	SETX (ENSBGRG00000014400) #8	NTNG2 (ENSBGRG00000014300) #9	MED27 (ENSBGRG00000013975) #10	RAPGEF1 (ENSBGRG00000013023) #11	UCK1 (ENSBGRG00000012820) #13	POMT1 (ENSBGRG00000012652) #14	PRRC2B (ENSBGRG00000012453) #15	PLPP7 (ENSBGRG00000012414) #16	FAM78A (ENSBGRG00000012390) #17	NUP214 (ENSBGRG00000009838) #18	AIF1L (ENSBGRG00000009668) #19	LAMC3 (ENSBGRG00000009568) #20	FIBCD1 (ENSBGRG00000009501) #21	QRFP (ENSBGRG00000009452) #22	ABL1 (ENSBGRG00000009365) #24	EXOSC2 (ENSBGRG00000008961) #26	PRDM12 (ENSBGRG00000008851) #27	FUBP3 (ENSBGRG00000008526) #28	ASS1 (ENSBGRG00000008323) #29	ENSBGRG00000007065 #31	GPR107 (ENSBGRG00000006768) #32	FNBP1 (ENSBGRG00000006540) #33	ENSBGRG00000006503	USP20 (ENSBGRG00000006274) #34	C9orf78 (ENSBGRG00000019238) #35	TOR1A (ENSBGRG00000019204) #36	TOR1B (ENSBGRG00000019140) #37	PTGES (ENSBGRG00000019070)	PRRX2 (ENSBGRG00000019047)
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT01000000214793	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Cow	MODERN SPECIES	2	SETX (ENSBTAG00000024822) #8	NTNG2 (ENSBTAG00000007235) #9	ENSBTAG00000053838	MED27 (ENSBTAG00000000382) #10	RAPGEF1 (ENSBTAG00000020791) #11	PRRT1B (ENSBTAG00000052831) #12	UCK1 (ENSBTAG00000010810) #13	POMT1 (ENSBTAG00000010805) #14	PRRC2B (ENSBTAG00000004400) #15	PLPP7 (ENSBTAG00000050974) #16	FAM78A (ENSBTAG00000004542) #17	NUP214 (ENSBTAG00000021896) #18	AIF1L (ENSBTAG00000052140) #19	LAMC3 (ENSBTAG00000017473) #20	FIBCD1 (ENSBTAG00000017982) #21	QRFP (ENSBTAG00000017980) #22	ABL1 (ENSBTAG00000017976) #24	EXOSC2 (ENSBTAG00000048071) #26	PRDM12 (ENSBTAG00000023797) #27	FUBP3 (ENSBTAG00000013072) #28	ASS1 (ENSBTAG00000020747) #29	HMCN2 (ENSBTAG00000002319) #30	NCS1 (ENSBTAG00000008726)	GPR107 (ENSBTAG00000004204) #32	FNBP1 (ENSBTAG00000020313) #33	USP20 (ENSBTAG00000020311) #34	C11H9orf78 (ENSBTAG00000020307) #35	TOR1A (ENSBTAG00000020305) #36	TOR1B (ENSBTAG00000002837) #37	PTGES (ENSBTAG00000019453)	PRRX2 (ENSBTAG00000002936)
Hybrid Bos Indicus	MODERN SPECIES	2	TTF1 (ENSBIXG00005011724) #7	SETX (ENSBIXG00005011828) #8	NTNG2 (ENSBIXG00005011889) #9	MED27 (ENSBIXG00005011937) #10	RAPGEF1 (ENSBIXG00005012047) #11	PRRT1B (ENSBIXG00005012138) #12	UCK1 (ENSBIXG00005012183) #13	POMT1 (ENSBIXG00005001269) #14	PRRC2B (ENSBIXG00005001295) #15	PLPP7 (ENSBIXG00005012351) #16	FAM78A (ENSBIXG00005001315) #17	NUP214 (ENSBIXG00005001325) #18	AIF1L (ENSBIXG00005012437) #19	LAMC3 (ENSBIXG00005012488) #20	FIBCD1 (ENSBIXG00005012515) #21	QRFP (ENSBIXG00005012518) #22	ENSBIXG00005001370	ABL1 (ENSBIXG00005012576) #24	EXOSC2 (ENSBIXG00005012666) #26	PRDM12 (ENSBIXG00005012689) #27	FUBP3 (ENSBIXG00005012728) #28	ASS1 (ENSBIXG00005012814) #29	HMCN2 (ENSBIXG00005012879) #30	NCS1 (ENSBIXG00005012934)	GPR107 (ENSBIXG00005012991) #32	FNBP1 (ENSBIXG00005013167) #33	ENSBIXG00005013221	USP20 (ENSBIXG00005013251) #34	C9orf78 (ENSBIXG00005013272) #35	TOR1A (ENSBIXG00005006429) #36	TOR1B (ENSBIXG00005013295) #37
American bison	MODERN SPECIES	3289	SETX (ENSBBBG00000009759) #8	NTNG2 (ENSBBBG00000009755) #9	ENSBBBG00000009748	MED27 (ENSBBBG00000009741) #10	RAPGEF1 (ENSBBBG00000009731) #11	PRRT1B (ENSBBBG00000009687) #12	UCK1 (ENSBBBG00000009682) #13	POMT1 (ENSBBBG00000009666) #14	PRRC2B (ENSBBBG00000009620) #15	PLPP7 (ENSBBBG00000009593) #16	FAM78A (ENSBBBG00000009591) #17	NUP214 (ENSBBBG00000001550) #18	AIF1L (ENSBBBG00000009560) #19	LAMC3 (ENSBBBG00000009556) #20	FIBCD1 (ENSBBBG00000009547) #21	QRFP (ENSBBBG00000009545) #22	ABL1 (ENSBBBG00000009543) #24	EXOSC2 (ENSBBBG00000009537) #26	FUBP3 (ENSBBBG00000009524) #28	ASS1 (ENSBBBG00000009513) #29	HMCN2 (ENSBBBG00000007921) #30	NCS1 (ENSBBBG00000025501)	GPR107 (ENSBBBG00000025414) #32	FNBP1 (ENSBBBG00000025211) #33	USP20 (ENSBBBG00000024987) #34	C9orf78 (ENSBBBG00000006821) #35	TOR1A (ENSBBBG00000006539) #36	TOR1B (ENSBBBG00000024827) #37	PTGES (ENSBBBG00000006527)	PRRX2 (ENSBBBG00000024797)	ASB6 (ENSBBBG00000024779)
Caprinae	ANCESTRAL SPECIES	27	ENSGT00390000014476	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009272.d	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Rambouillet Sheep	MODERN SPECIES	19	BARHL1 (ENSOARG00020017803)	CFAP77 (ENSOARG00020017851)	TTF1 (ENSOARG00020017929) #7	NTNG2 (ENSOARG00020000152) #9	MED27 (ENSOARG00020000195) #10	RAPGEF1 (ENSOARG00020000271) #11	UCK1 (ENSOARG00020000489) #13	POMT1 (ENSOARG00020000540) #14	PRRC2B (ENSOARG00020000660) #15	PLPP7 (ENSOARG00020000737) #16	FAM78A (ENSOARG00020000746) #17	NUP214 (ENSOARG00020000785) #18	AIF1L (ENSOARG00020000990) #19	LAMC3 (ENSOARG00020001023) #20	FIBCD1 (ENSOARG00020001071) #21	QRFP (ENSOARG00020001090) #22	ABL1 (ENSOARG00020001107) #24	EXOSC2 (ENSOARG00020001181) #26	PRDM12 (ENSOARG00020001340) #27	FUBP3 (ENSOARG00020001368) #28	ASS1 (ENSOARG00020001391) #29	HMCN2 (ENSOARG00020001432) #30	NCS1 (ENSOARG00020001618)	GPR107 (ENSOARG00020001668) #32	FNBP1 (ENSOARG00020001812) #33	USP20 (ENSOARG00020001868) #34	C9orf78 (ENSOARG00020001935) #35	TOR1A (ENSOARG00020001959) #36	TOR1B (ENSOARG00020001999) #37	PTGES (ENSOARG00020002004)	PRRX2 (ENSOARG00020002017)
Goat	MODERN SPECIES	2	CFAP77 (ENSCHIG00000022706)	TTF1 (ENSCHIG00000016211) #7	SETX (ENSCHIG00000020740) #8	NTNG2 (ENSCHIG00000013952) #9	MED27 (ENSCHIG00000022460) #10	RAPGEF1 (ENSCHIG00000017236) #11	UCK1 (ENSCHIG00000011080) #13	POMT1 (ENSCHIG00000024383) #14	PRRC2B (ENSCHIG00000019708) #15	PLPP7 (ENSCHIG00000017811) #16	FAM78A (ENSCHIG00000012603) #17	NUP214 (ENSCHIG00000026201) #18	AIF1L (ENSCHIG00000009001) #19	LAMC3 (ENSCHIG00000025745) #20	FIBCD1 (ENSCHIG00000014267) #21	QRFP (ENSCHIG00000010002) #22	ABL1 (ENSCHIG00000021749) #24	EXOSC2 (ENSCHIG00000021398) #26	PRDM12 (ENSCHIG00000025005) #27	FUBP3 (ENSCHIG00000027228) #28	ASS1 (ENSCHIG00000017801) #29	HMCN2 (ENSCHIG00000017573) #30	NCS1 (ENSCHIG00000017219)	GPR107 (ENSCHIG00000022854) #32	FNBP1 (ENSCHIG00000027203) #33	USP20 (ENSCHIG00000017589) #34	ENSCHIG00000024518	C9orf78 (ENSCHIG00000027025) #35	TOR1A (ENSCHIG00000020435) #36	TOR1B (ENSCHIG00000015527) #37	ENSCHIG00000012306
Siberian musk deer	MODERN SPECIES	1178	CFAP77 (ENSMMSG00000009596)	ENSMMSG00000009527 #7	SETX (ENSMMSG00000009473) #8	NTNG2 (ENSMMSG00000009330) #9	MED27 (ENSMMSG00000009213) #10	RAPGEF1 (ENSMMSG00000008741) #11	UCK1 (ENSMMSG00000008624) #13	POMT1 (ENSMMSG00000008544) #14	PRRC2B (ENSMMSG00000008368) #15	PLPP7 (ENSMMSG00000008329) #16	FAM78A (ENSMMSG00000008304) #17	NUP214 (ENSMMSG00000008157) #18	AIF1L (ENSMMSG00000008111) #19	LAMC3 (ENSMMSG00000007962) #20	FIBCD1 (ENSMMSG00000007871) #21	QRFP (ENSMMSG00000007859) #22	ABL1 (ENSMMSG00000007779) #24	EXOSC2 (ENSMMSG00000007712) #26	PRDM12 (ENSMMSG00000007662) #27	FUBP3 (ENSMMSG00000007563) #28	ASS1 (ENSMMSG00000007477) #29	HMCN2 (ENSMMSG00000006970) #30	NCS1 (ENSMMSG00000006889)	GPR107 (ENSMMSG00000006768) #32	FNBP1 (ENSMMSG00000006573) #33	USP20 (ENSMMSG00000006424) #34	ENSMMSG00000006362 #35	TOR1A (ENSMMSG00000006335) #36	TOR1B (ENSMMSG00000006315) #37	PTGES (ENSMMSG00000006301)	PRRX2 (ENSMMSG00000006283)
Yarkand deer	MODERN SPECIES	2	CFAP77 (ENSCHYG00000024295)	TTF1 (ENSCHYG00000024227) #7	SETX (ENSCHYG00000024123) #8	NTNG2 (ENSCHYG00000023956) #9	MED27 (ENSCHYG00000023708) #10	RAPGEF1 (ENSCHYG00000022836) #11	ENSCHYG00000022691 #13	POMT1 (ENSCHYG00000022562) #14	PRRC2B (ENSCHYG00000022095) #15	PLPP7 (ENSCHYG00000022043) #16	FAM78A (ENSCHYG00000022012) #17	NUP214 (ENSCHYG00000021576) #18	ENSCHYG00000021394 #19	LAMC3 (ENSCHYG00000020895) #20	FIBCD1 (ENSCHYG00000020798) #21	QRFP (ENSCHYG00000020761) #22	ABL1 (ENSCHYG00000020470) #24	EXOSC2 (ENSCHYG00000020290) #26	PRDM12 (ENSCHYG00000020202) #27	FUBP3 (ENSCHYG00000019356) #28	ASS1 (ENSCHYG00000019066) #29	HMCN2 (ENSCHYG00000018642) #30	ENSCHYG00000018457 #31	GPR107 (ENSCHYG00000017510) #32	FNBP1 (ENSCHYG00000015180) #33	USP20 (ENSCHYG00000014904) #34	C9orf78 (ENSCHYG00000014673) #35	TOR1A (ENSCHYG00000014636) #36	TOR1B (ENSCHYG00000014590) #37	PTGES (ENSCHYG00000014522)	PRRX2 (ENSCHYG00000014462)
Camelidae	ANCESTRAL SPECIES	5	ENSGT00390000014476	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643	ENSGT00390000006784
Arabian camel	MODERN SPECIES	30	ENSCDRG00005004468	TTF1 (ENSCDRG00005004487) #7	SETX (ENSCDRG00005004571) #8	NTNG2 (ENSCDRG00005004638) #9	MED27 (ENSCDRG00005004656) #10	RAPGEF1 (ENSCDRG00005004831) #11	UCK1 (ENSCDRG00005006047) #13	POMT1 (ENSCDRG00005006084) #14	PRRC2B (ENSCDRG00005006141) #15	PLPP7 (ENSCDRG00005006324) #16	FAM78A (ENSCDRG00005006358) #17	NUP214 (ENSCDRG00005006401) #18	AIF1L (ENSCDRG00005006604) #19	LAMC3 (ENSCDRG00005006663) #20	FIBCD1 (ENSCDRG00005006893) #21	QRFP (ENSCDRG00005006956) #22	ABL1 (ENSCDRG00005006992) #24	EXOSC2 (ENSCDRG00005007174) #26	ENSCDRG00005007345	FUBP3 (ENSCDRG00005007402) #28	ASS1 (ENSCDRG00005007448) #29	HMCN2 (ENSCDRG00005007546) #30	NCS1 (ENSCDRG00005008430)	GPR107 (ENSCDRG00005000042) #32	FNBP1 (ENSCDRG00005000106) #33	USP20 (ENSCDRG00005000329) #34	ENSCDRG00005000380	C9orf78 (ENSCDRG00005000393) #35	TOR1A (ENSCDRG00005000415) #36	TOR1B (ENSCDRG00005000429) #37	PTGES (ENSCDRG00005000446)
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000154645.B	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36
Carnivora	ANCESTRAL SPECIES	18	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000154645.B	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Caniformia	ANCESTRAL SPECIES	16	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Ursidae	ANCESTRAL SPECIES	6	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Ursus	ANCESTRAL SPECIES	15	ENSGT00940000171485	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
American black bear	MODERN SPECIES	11							UCK1 (ENSUAMG00000008845) #13	POMT1 (ENSUAMG00000008837) #14	PRRC2B (ENSUAMG00000008467) #15	PLPP7 (ENSUAMG00000008431) #16	FAM78A (ENSUAMG00000008430) #17	NUP214 (ENSUAMG00000008071) #18	AIF1L (ENSUAMG00000008058) #19	LAMC3 (ENSUAMG00000008056) #20	FIBCD1 (ENSUAMG00000008053) #21	QRFP (ENSUAMG00000008052) #22	ABL1 (ENSUAMG00000008042) #24
Polar bear	MODERN SPECIES	214	GTF3C4 (ENSUMAG00000016660)	DDX31 (ENSUMAG00000016669)	TTF1 (ENSUMAG00000016720) #7	SETX (ENSUMAG00000016729) #8	NTNG2 (ENSUMAG00000016843) #9	MED27 (ENSUMAG00000016856) #10	RAPGEF1 (ENSUMAG00000016922) #11	UCK1 (ENSUMAG00000017233) #13	POMT1 (ENSUMAG00000017298) #14	PRRC2B (ENSUMAG00000017561) #15	FAM78A (ENSUMAG00000018578) #17	NUP214 (ENSUMAG00000018591) #18	AIF1L (ENSUMAG00000018626) #19	LAMC3 (ENSUMAG00000018641) #20	FIBCD1 (ENSUMAG00000018682) #21	QRFP (ENSUMAG00000018686) #22	ABL1 (ENSUMAG00000018694) #24	EXOSC2 (ENSUMAG00000018726) #26	FUBP3 (ENSUMAG00000018745) #28	ASS1 (ENSUMAG00000018929) #29	ENSUMAG00000018959 #30	ENSUMAG00000018981 #31	GPR107 (ENSUMAG00000019019) #32	FNBP1 (ENSUMAG00000019252) #33	ENSUMAG00000020209 #34	C9orf78 (ENSUMAG00000020215) #35	TOR1A (ENSUMAG00000020220) #36	TOR1B (ENSUMAG00000020225) #37	PTGES (ENSUMAG00000020230)	PRRX2 (ENSUMAG00000020232)	ASB6 (ENSUMAG00000020240)
Giant Panda	MODERN SPECIES	17	SETX (ENSAMEG00000004067) #8	NTNG2 (ENSAMEG00000004056) #9	MED27 (ENSAMEG00000023998) #10	ENSAMEG00000026484	RAPGEF1 (ENSAMEG00000016435) #11	ENSAMEG00000023674 #12	ENSAMEG00000016424 #13	POMT1 (ENSAMEG00000016384) #14	PRRC2B (ENSAMEG00000016358) #15	ENSAMEG00000031077 #16	FAM78A (ENSAMEG00000016348) #17	NUP214 (ENSAMEG00000016303) #18	AIF1L (ENSAMEG00000016276) #19	LAMC3 (ENSAMEG00000016281) #20	FIBCD1 (ENSAMEG00000016267) #21	QRFP (ENSAMEG00000019125) #22	ABL1 (ENSAMEG00000016250) #24	EXOSC2 (ENSAMEG00000016239) #26	ENSAMEG00000016234	FUBP3 (ENSAMEG00000016193) #28	ASS1 (ENSAMEG00000016184) #29	HMCN2 (ENSAMEG00000024751) #30	ENSAMEG00000016156 #31	GPR107 (ENSAMEG00000016130) #32	FNBP1 (ENSAMEG00000016090) #33	USP20 (ENSAMEG00000016078) #34	C9orf78 (ENSAMEG00000016061) #35	TOR1A (ENSAMEG00000016037) #36	TOR1B (ENSAMEG00000016018) #37	PTGES (ENSAMEG00000031097)	PRRX2 (ENSAMEG00000016011)
Mustelinae	ANCESTRAL SPECIES	12	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Ferret	MODERN SPECIES	218	TTF1 (ENSMPUG00000012536) #7	SETX (ENSMPUG00000012542) #8	NTNG2 (ENSMPUG00000012558) #9	RAPGEF1 (ENSMPUG00000012577) #11	PRRT1B (ENSMPUG00000012584) #12	UCK1 (ENSMPUG00000012585) #13	POMT1 (ENSMPUG00000012587) #14	PRRC2B (ENSMPUG00000012589) #15	PLPP7 (ENSMPUG00000012602) #16	FAM78A (ENSMPUG00000012604) #17	NUP214 (ENSMPUG00000012605) #18	ENSMPUG00000012623	ENSMPUG00000012626	LAMC3 (ENSMPUG00000012628) #20	FIBCD1 (ENSMPUG00000012648) #21	QRFP (ENSMPUG00000019214) #22	ABL1 (ENSMPUG00000012678) #24	EXOSC2 (ENSMPUG00000012686) #26	ENSMPUG00000012688 #27	FUBP3 (ENSMPUG00000012692) #28	ASS1 (ENSMPUG00000012697) #29	HMCN2 (ENSMPUG00000012703) #30	ENSMPUG00000012851	ENSMPUG00000012854 #31	GPR107 (ENSMPUG00000012859) #32	FNBP1 (ENSMPUG00000012864) #33	USP20 (ENSMPUG00000012869) #34	C9orf78 (ENSMPUG00000012876) #35	ENSMPUG00000019217	TOR1B (ENSMPUG00000012902) #37	ENSMPUG00000019221
American mink	MODERN SPECIES	182	TTF1 (ENSNVIG00000018501) #7	SETX (ENSNVIG00000018470) #8	NTNG2 (ENSNVIG00000018391) #9	MED27 (ENSNVIG00000018350) #10	RAPGEF1 (ENSNVIG00000018310) #11	ENSNVIG00000018309 #12	UCK1 (ENSNVIG00000018285) #13	POMT1 (ENSNVIG00000018225) #14	PRRC2B (ENSNVIG00000018088) #15	PLPP7 (ENSNVIG00000018057) #16	FA78A (ENSNVIG00000018035) #17	NUP214 (ENSNVIG00000017837) #18	AIF1L (ENSNVIG00000017815) #19	LAMC3 (ENSNVIG00000017786) #20	FIBCD1 (ENSNVIG00000017742) #21	QRFP (ENSNVIG00000017730) #22	ABL1 (ENSNVIG00000017711) #24	EXOSC2 (ENSNVIG00000017595) #26	FUBP3 (ENSNVIG00000017557) #28	ASS1 (ENSNVIG00000017500) #29	HMCN2 (ENSNVIG00000017387) #30	ENSNVIG00000017368 #31	GPR107 (ENSNVIG00000017208) #32	FNBP1 (ENSNVIG00000016798) #33	USP20 (ENSNVIG00000016742) #34	C9orf78 (ENSNVIG00000016711) #35	TOR1A (ENSNVIG00000016693) #36	TOR1B (ENSNVIG00000016675) #37	PTGES (ENSNVIG00000016663)	PRRX2 (ENSNVIG00000016658)	ASB6 (ENSNVIG00000016615)
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00910000147033	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Dog	MODERN SPECIES	37	TTF1 (ENSCAFG00845016913) #7	SETX (ENSCAFG00845017137) #8	NTNG2 (ENSCAFG00845017552) #9	MED27 (ENSCAFG00845017764) #10	RAPGEF1 (ENSCAFG00845018101) #11	PRRT1B (ENSCAFG00845018678) #12	UCK1 (ENSCAFG00845018761) #13	POMT1 (ENSCAFG00845018932) #14	PRRC2B (ENSCAFG00845019333) #15	PLPP7 (ENSCAFG00845019908) #16	FAM78A (ENSCAFG00845019937) #17	NUP214 (ENSCAFG00845020000) #18	AIF1L (ENSCAFG00845020252) #19	LAMC3 (ENSCAFG00845020359) #20	FIBCD1 (ENSCAFG00845020483) #21	QRFP (ENSCAFG00845020546) #22	ABL1 (ENSCAFG00845020595) #24	EXOSC2 (ENSCAFG00845020890) #26	PRDM12 (ENSCAFG00845021131) #27	FUBP3 (ENSCAFG00845021240) #28	ENSCAFG00845021540	ASS1 (ENSCAFG00845021573) #29	ENSCAFG00845021728 #30	ENSCAFG00845021859 #31	GPR107 (ENSCAFG00845021950) #32	FNBP1 (ENSCAFG00845022336) #33	USP20 (ENSCAFG00845023043) #34	C9orf78 (ENSCAFG00845023258) #35	TOR1A (ENSCAFG00845023305) #36	TOR1B (ENSCAFG00845023333) #37	PTGES (ENSCAFG00845023377)
Dingo	MODERN SPECIES	327	TTF1 (ENSCAFG00020024520) #7	SETX (ENSCAFG00020024489) #8	NTNG2 (ENSCAFG00020024478) #9	MED27 (ENSCAFG00020024473) #10	RAPGEF1 (ENSCAFG00020024469) #11	PRRT1B (ENSCAFG00020024468) #12	UCK1 (ENSCAFG00020024467) #13	POMT1 (ENSCAFG00020024466) #14	PRRC2B (ENSCAFG00020024457) #15	PLPP7 (ENSCAFG00020024453) #16	FAM78A (ENSCAFG00020024451) #17	NUP214 (ENSCAFG00020024205) #18	AIF1L (ENSCAFG00020024184) #19	LAMC3 (ENSCAFG00020024114) #20	FIBCD1 (ENSCAFG00020024086) #21	QRFP (ENSCAFG00020024083) #22	ABL1 (ENSCAFG00020024055) #24	EXOSC2 (ENSCAFG00020024047) #26	PRDM12 (ENSCAFG00020024046) #27	FUBP3 (ENSCAFG00020024002) #28	ENSCAFG00020023999	ASS1 (ENSCAFG00020023998) #29	ENSCAFG00020023994	ENSCAFG00020023990 #30	NCS1 (ENSCAFG00020023988)	GPR107 (ENSCAFG00020023954) #32	FNBP1 (ENSCAFG00020023720) #33	USP20 (ENSCAFG00020023699) #34	C9orf78 (ENSCAFG00020023693) #35	TOR1A (ENSCAFG00020023689) #36	TOR1B (ENSCAFG00020023687) #37
Red fox	MODERN SPECIES	77	TTF1 (ENSVVUG00000028389) #7	SETX (ENSVVUG00000028381) #8	NTNG2 (ENSVVUG00000028377) #9	MED27 (ENSVVUG00000028375) #10	ENSVVUG00000028373	RAPGEF1 (ENSVVUG00000028347) #11	UCK1 (ENSVVUG00000028334) #13	POMT1 (ENSVVUG00000028093) #14	PRRC2B (ENSVVUG00000028063) #15	PLPP7 (ENSVVUG00000028058) #16	FAM78A (ENSVVUG00000028056) #17	NUP214 (ENSVVUG00000027727) #18	AIF1L (ENSVVUG00000027686) #19	LAMC3 (ENSVVUG00000027684) #20	FIBCD1 (ENSVVUG00000027682) #21	QRFP (ENSVVUG00000027680) #22	ABL1 (ENSVVUG00000027674) #24	EXOSC2 (ENSVVUG00000027665) #26	PRDM12 (ENSVVUG00000027662) #27	FUBP3 (ENSVVUG00000027641) #28	ENSVVUG00000027636	ASS1 (ENSVVUG00000027500) #29	ENSVVUG00000027466 #31	GPR107 (ENSVVUG00000027461) #32	ENSVVUG00000027457	FNBP1 (ENSVVUG00000027452) #33	USP20 (ENSVVUG00000027434) #34	CUNH9orf78 (ENSVVUG00000027415) #35	TOR1A (ENSVVUG00000027408) #36	TOR1B (ENSVVUG00000027404) #37	PTGES (ENSVVUG00000027400)
Felidae	ANCESTRAL SPECIES	16	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Panthera	ANCESTRAL SPECIES	11	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Panthera_a	ANCESTRAL SPECIES	10	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
lion	MODERN SPECIES	13	BARHL1 (ENSPLOG00000022248)	CFAP77 (ENSPLOG00000022256)	TTF1 (ENSPLOG00000022265) #7	SETX (ENSPLOG00000022285) #8	NTNG2 (ENSPLOG00000022306) #9	MED27 (ENSPLOG00000007533) #10	RAPGEF1 (ENSPLOG00000007743) #11	UCK1 (ENSPLOG00000008110) #13	POMT1 (ENSPLOG00000008262) #14	PRRC2B (ENSPLOG00000008611) #15	PLPP7 (ENSPLOG00000009099) #16	NUP214 (ENSPLOG00000009245) #18	AIF1L (ENSPLOG00000009527) #19	LAMC3 (ENSPLOG00000009600) #20	FIBCD1 (ENSPLOG00000009735) #21	ENSPLOG00000009790 #22	ABL1 (ENSPLOG00000009827) #24	EXOSC2 (ENSPLOG00000009904) #26	PRDM12 (ENSPLOG00000009988) #27	FUBP3 (ENSPLOG00000010042) #28	ASS1 (ENSPLOG00000010161) #29	HMCN2 (ENSPLOG00000010351) #30	ENSPLOG00000010826 #31	GPR107 (ENSPLOG00000010916) #32	FNBP1 (ENSPLOG00000011409) #33	USP20 (ENSPLOG00000011587) #34	C9orf78 (ENSPLOG00000011661) #35	ENSPLOG00000011711 #36	TOR1B (ENSPLOG00000011766) #37	ENSPLOG00000011806	PRRX2 (ENSPLOG00000011852)
leopard	MODERN SPECIES	83	ENSPPRG00000013458 #7	SETX (ENSPPRG00000012867) #8	NTNG2 (ENSPPRG00000012075) #9	MED27 (ENSPPRG00000011635) #10	RAPGEF1 (ENSPPRG00000009403) #11	PRRT1B (ENSPPRG00000005555) #12	UCK1 (ENSPPRG00000005312) #13	POMT1 (ENSPPRG00000004061) #14	PRRC2B (ENSPPRG00000001024) #15	PLPP7 (ENSPPRG00000013265) #16	FAM78A (ENSPPRG00000012957) #17	NUP214 (ENSPPRG00000012721) #18	AIF1L (ENSPPRG00000007374) #19	LAMC3 (ENSPPRG00000005503) #20	FIBCD1 (ENSPPRG00000003917) #21	QRFP (ENSPPRG00000016075) #22	ABL1 (ENSPPRG00000002576) #24	EXOSC2 (ENSPPRG00000001089) #26	PRDM12 (ENSPPRG00000023024) #27	FUBP3 (ENSPPRG00000023251) #28	ASS1 (ENSPPRG00000020977) #29	NCS1 (ENSPPRG00000009454)	GPR107 (ENSPPRG00000008226) #32	FNBP1 (ENSPPRG00000005330) #33	USP20 (ENSPPRG00000002771) #34	C9orf78 (ENSPPRG00000000737) #35	TOR1A (ENSPPRG00000021638) #36	TOR1B (ENSPPRG00000020142) #37	PTGES (ENSPPRG00000018646)	PRRX2 (ENSPPRG00000017132)	ASB6 (ENSPPRG00000014052)
Tiger	MODERN SPECIES	121	BARHL1 (ENSPTIG00000010132)	CFAP77 (ENSPTIG00000008549)	ENSPTIG00000007300 #7	SETX (ENSPTIG00000021101) #8	MED27 (ENSPTIG00000019985) #10	RAPGEF1 (ENSPTIG00000014173) #11	UCK1 (ENSPTIG00000011425) #13	ENSPTIG00000009105 #14	PRRC2B (ENSPTIG00000019108) #15	ENSPTIG00000006604 #16	FAM78A (ENSPTIG00000017998) #17	NUP214 (ENSPTIG00000015623) #18	ENSPTIG00000014798	AIF1L (ENSPTIG00000012522) #19	LAMC3 (ENSPTIG00000010612) #20	QRFP (ENSPTIG00000006457) #22	ABL1 (ENSPTIG00000008573) #24	EXOSC2 (ENSPTIG00000021163) #26	FUBP3 (ENSPTIG00000019979) #28	ASS1 (ENSPTIG00000018633) #29	ENSPTIG00000018225 #30	NCS1 (ENSPTIG00000016706)	GPR107 (ENSPTIG00000014552) #32	FNBP1 (ENSPTIG00000008070) #33	ENSPTIG00000005975 #34	C9orf78 (ENSPTIG00000004001) #35	TOR1A (ENSPTIG00000019171) #36	TOR1B (ENSPTIG00000018297) #37	PTGES (ENSPTIG00000017624)	ENSPTIG00000017128	ASB6 (ENSPTIG00000016471)
Cat	MODERN SPECIES	244	SETX (ENSFCAG00000007102) #8	NTNG2 (ENSFCAG00000028886) #9	MED27 (ENSFCAG00000007101) #10	RAPGEF1 (ENSFCAG00000007100) #11	PRRT1B (ENSFCAG00000034542) #12	UCK1 (ENSFCAG00000032302) #13	POMT1 (ENSFCAG00000008385) #14	PRRC2B (ENSFCAG00000049201) #15	PLPP7 (ENSFCAG00000005122) #16	FAM78A (ENSFCAG00000025273) #17	NUP214 (ENSFCAG00000005120) #18	ENSFCAG00000047842	AIF1L (ENSFCAG00000032353) #19	LAMC3 (ENSFCAG00000005118) #20	FIBCD1 (ENSFCAG00000005117) #21	QRFP (ENSFCAG00000046249) #22	ABL1 (ENSFCAG00000005115) #24	EXOSC2 (ENSFCAG00000025936) #26	PRDM12 (ENSFCAG00000043086) #27	FUBP3 (ENSFCAG00000005113) #28	ASS1 (ENSFCAG00000005111) #29	HMCN2 (ENSFCAG00000030267) #30	NCS1 (ENSFCAG00000005109) #31	GPR107 (ENSFCAG00000005107) #32	FNBP1 (ENSFCAG00000035160) #33	USP20 (ENSFCAG00000013549) #34	CD4H9orf78 (ENSFCAG00000004761) #35	TOR1B (ENSFCAG00000008977) #37	TOR1A (ENSFCAG00000004760) #36	PTGES (ENSFCAG00000004759)	PRRX2 (ENSFCAG00000004758)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Chiroptera	ANCESTRAL SPECIES	8	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Microchiroptera	ANCESTRAL SPECIES	7	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00940000161643	ENSGT00390000006784
Greater horseshoe bat	MODERN SPECIES	3	TTF1 (ENSRFEG00010013126) #7	SETX (ENSRFEG00010013062) #8	NTNG2 (ENSRFEG00010013000) #9	MED27 (ENSRFEG00010012877) #10	RAPGEF1 (ENSRFEG00010011862) #11	PRRT1B (ENSRFEG00010011742) #12	UCK1 (ENSRFEG00010011586) #13	POMT1 (ENSRFEG00010011466) #14	PRRC2B (ENSRFEG00010011251) #15	PLPP7 (ENSRFEG00010011187) #16	FAM78A (ENSRFEG00010011145) #17	NUP214 (ENSRFEG00010010980) #18	AIF1L (ENSRFEG00010010856) #19	LAMC3 (ENSRFEG00010010761) #20	FIBCD1 (ENSRFEG00010010611) #21	QRFP (ENSRFEG00010010579) #22	ABL1 (ENSRFEG00010010489) #24	EXOSC2 (ENSRFEG00010010327) #26	PRDM12 (ENSRFEG00010021941) #27	FUBP3 (ENSRFEG00010021930) #28	ASS1 (ENSRFEG00010021908) #29	HMCN2 (ENSRFEG00010021885) #30	NCS1 (ENSRFEG00010021843)	GPR107 (ENSRFEG00010021829) #32	FNBP1 (ENSRFEG00010021794) #33	USP20 (ENSRFEG00010021769) #34	C9orf78 (ENSRFEG00010021754) #35	ENSRFEG00010021746 #37	TOR1A (ENSRFEG00010021736) #36	PRRX2 (ENSRFEG00010021726)	ASB6 (ENSRFEG00010021715)
Microbat	MODERN SPECIES	1636																QRFP (ENSMLUG00000008824) #22	ABL1 (ENSMLUG00000008799) #24	EXOSC2 (ENSMLUG00000008776) #26	PRDM12 (ENSMLUG00000012368) #27	FUBP3 (ENSMLUG00000008743) #28	ASS1 (ENSMLUG00000006066) #29
Equus	ANCESTRAL SPECIES	30	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT01010000230328 #25	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Donkey	MODERN SPECIES	1	ENSEASG00005029732 #10	ENSEASG00005025052	RAPGEF1 (ENSEASG00005009606) #11	PRRT1B (ENSEASG00005027000) #12	ENSEASG00005009581	UCK1 (ENSEASG00005009579) #13	POMT1 (ENSEASG00005009219) #14	PRRC2B (ENSEASG00005009152) #15	PLPP7 (ENSEASG00005009147) #16	FAM78A (ENSEASG00005033020) #17	NUP214 (ENSEASG00005008585) #18	AIF1L (ENSEASG00005031622) #19	LAMC3 (ENSEASG00005008508) #20	ENSEASG00005008549	FIBCD1 (ENSEASG00005008491) #21	QRFP (ENSEASG00005008487) #22	ABL1 (ENSEASG00005008482) #24	ENSEASG00005035304 #25	EXOSC2 (ENSEASG00005008475) #26	PRDM12 (ENSEASG00005008472) #27	FUBP3 (ENSEASG00005008416) #28	ENSEASG00005032366	HMCN2 (ENSEASG00005008402) #30	ENSEASG00005024781 #31	GPR107 (ENSEASG00005008388) #32	FNBP1 (ENSEASG00005008374) #33	USP20 (ENSEASG00005008368) #34	C9orf78 (ENSEASG00005008364) #35	TOR1A (ENSEASG00005037998) #36	TOR1B (ENSEASG00005008361) #37	PTGES (ENSEASG00005028809)
Atlantogenata	ANCESTRAL SPECIES	47	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000165095	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Xenarthra	ANCESTRAL SPECIES	219														ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Sloth	MODERN SPECIES	8797																QRFP (ENSCHOG00000000131) #22
Armadillo	MODERN SPECIES	1994														LAMC3 (ENSDNOG00000015381) #20	FIBCD1 (ENSDNOG00000007685) #21	QRFP (ENSDNOG00000011877) #22	ABL1 (ENSDNOG00000011197) #24	ENSDNOG00000037237 #26	PRDM12 (ENSDNOG00000042302) #27	FUBP3 (ENSDNOG00000014533) #28	ASS1 (ENSDNOG00000038544) #29	HMCN2 (ENSDNOG00000033946) #30	ENSDNOG00000034499 #31	GPR107 (ENSDNOG00000004178) #32	FNBP1 (ENSDNOG00000019220) #33	USP20 (ENSDNOG00000035058) #34	C9orf78 (ENSDNOG00000019214) #35	TOR1A (ENSDNOG00000019212) #36	TOR1B (ENSDNOG00000004485) #37
Afrotheria	ANCESTRAL SPECIES		ENSGT00390000014476	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000165095	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Afrotheria_a	ANCESTRAL SPECIES		ENSGT00390000014476	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000165095	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Elephant	MODERN SPECIES	472	CFAP77 (ENSLAFG00000015373)	TTF1 (ENSLAFG00000001119) #7	ENSLAFG00000017327 #8	NTNG2 (ENSLAFG00000032466) #9	MED27 (ENSLAFG00000011556) #10	RAPGEF1 (ENSLAFG00000003693) #11	ENSLAFG00000027336 #12	UCK1 (ENSLAFG00000021633) #13	POMT1 (ENSLAFG00000021539) #14	PRRC2B (ENSLAFG00000020536) #15	FAM78A (ENSLAFG00000016099) #17	NUP214 (ENSLAFG00000000807) #18	AIF1L (ENSLAFG00000000804) #19	LAMC3 (ENSLAFG00000011583) #20	FIBCD1 (ENSLAFG00000001852) #21	QRFP (ENSLAFG00000006993) #22	ABL1 (ENSLAFG00000006986) #24	EXOSC2 (ENSLAFG00000006984) #26	PRDM12 (ENSLAFG00000006979) #27	FUBP3 (ENSLAFG00000011611) #28	ASS1 (ENSLAFG00000001037) #29	ENSLAFG00000003243	ENSLAFG00000028874	ENSLAFG00000029599 #30	NCS1 (ENSLAFG00000004356)	GPR107 (ENSLAFG00000002123) #32	FNBP1 (ENSLAFG00000009771) #33	USP20 (ENSLAFG00000009765) #34	C9orf78 (ENSLAFG00000009762) #35	TOR1A (ENSLAFG00000009760) #36	TOR1B (ENSLAFG00000009757) #37
Hyrax	MODERN SPECIES	9436															FIBCD1 (ENSPCAG00000004065) #21	QRFP (ENSPCAG00000004121) #22
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a.m.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787.a #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a.n #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744.a #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787.a #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a.n #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744.a #28	ENSGT00940000156744.b #28	ENSGT00390000004524 #29	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787.a #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a.n #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744.a #28	ENSGT00940000156744.b #28	ENSGT00390000004524 #29	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787.a #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643
koala	MODERN SPECIES	243	ENSPCIG00000012149 #7	SETX (ENSPCIG00000019748) #8	NTNG2 (ENSPCIG00000019749) #9	MED27 (ENSPCIG00000014541) #10	RAPGEF1 (ENSPCIG00000019752) #11	ENSPCIG00000019754 #12	UCK1 (ENSPCIG00000019755) #13	POMT1 (ENSPCIG00000019756) #14	PRRC2B (ENSPCIG00000019760) #15	PLPP7 (ENSPCIG00000019763) #16	FAM78A (ENSPCIG00000019765) #17	NUP214 (ENSPCIG00000032067) #18	AIF1L (ENSPCIG00000023039) #19	LAMC3 (ENSPCIG00000023042) #20	FIBCD1 (ENSPCIG00000023049) #21	ENSPCIG00000023053 #22	ABL1 (ENSPCIG00000023056) #24	EXOSC2 (ENSPCIG00000024122) #26	PRDM12 (ENSPCIG00000024119) #27	FUBP3 (ENSPCIG00000024114) #28	ENSPCIG00000024112	ASS1 (ENSPCIG00000024108) #29	ENSPCIG00000024104	ENSPCIG00000031544 #31	ENSPCIG00000027574	GPR107 (ENSPCIG00000024101) #32	FNBP1 (ENSPCIG00000024088) #33	USP20 (ENSPCIG00000024082) #34	C9orf78 (ENSPCIG00000024080) #35	TOR1A (ENSPCIG00000024078) #36	TOR1B (ENSPCIG00000024077) #37
Common wonbat	MODERN SPECIES	1030	SETX (ENSVURG00010012398) #8	NTNG2 (ENSVURG00010012426) #9	MED27 (ENSVURG00010012431) #10	RAPGEF1 (ENSVURG00010012445) #11	ENSVURG00010012532 #12	UCK1 (ENSVURG00010012538) #13	POMT1 (ENSVURG00010012559) #14	PRRC2B (ENSVURG00010012602) #15	ENSVURG00010012635 #16	ENSVURG00010012643 #16	FAM78A (ENSVURG00010012649) #17	NUP214 (ENSVURG00010012657) #18	AIF1L (ENSVURG00010012688) #19	LAMC3 (ENSVURG00010012700) #20	FIBCD1 (ENSVURG00010012708) #21	ENSVURG00010012717 #22	ABL1 (ENSVURG00010012727) #24	EXOSC2 (ENSVURG00010012748) #26	PRDM12 (ENSVURG00010012758) #27	ENSVURG00010012765 #28	ASS1 (ENSVURG00010012769) #29	NCS1 (ENSVURG00010012846)	GPR107 (ENSVURG00010012853) #32	FNBP1 (ENSVURG00010012874) #33	USP20 (ENSVURG00010012929) #34	ENSVURG00010012950 #35	TOR1A (ENSVURG00010012967) #36	TOR1B (ENSVURG00010012974) #37	ENSVURG00010012980	PRRX2 (ENSVURG00010012991)	ASB6 (ENSVURG00010013022)
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000023663 #7	SETX (ENSSHAG00000018610) #8	NTNG2 (ENSSHAG00000018529) #9	MED27 (ENSSHAG00000021149) #10	RAPGEF1 (ENSSHAG00000017744) #11	ENSSHAG00000027332 #12	UCK1 (ENSSHAG00000026604) #13	PRRC2B (ENSSHAG00000017574) #15	POMT1 (ENSSHAG00000024319) #14	PLPP7 (ENSSHAG00000017412) #16	FAM78A (ENSSHAG00000024695) #17	NUP214 (ENSSHAG00000017178) #18	ENSSHAG00000032126 #19	LAMC3 (ENSSHAG00000016927) #20	FIBCD1 (ENSSHAG00000016548) #21	ENSSHAG00000023233 #22	ABL1 (ENSSHAG00000016375) #24	EXOSC2 (ENSSHAG00000016050) #26	PRDM12 (ENSSHAG00000028206) #27	FUBP3 (ENSSHAG00000015689) #28	ASS1 (ENSSHAG00000015158) #29	HMCN2 (ENSSHAG00000014551) #30	ENSSHAG00000029345 #31	GPR107 (ENSSHAG00000013610) #32	FNBP1 (ENSSHAG00000032090) #33	USP20 (ENSSHAG00000012417) #34	ENSSHAG00000012313 #36	TOR1B (ENSSHAG00000027080) #37	PTGES (ENSSHAG00000021077)	PRRX2 (ENSSHAG00000026808)	ASB6 (ENSSHAG00000010852)
Opossum	MODERN SPECIES		ENSMODG00000012538 #7	SETX (ENSMODG00000012535) #8	NTNG2 (ENSMODG00000012511) #9	MED27 (ENSMODG00000012499) #10	RAPGEF1 (ENSMODG00000012492) #11	ENSMODG00000049539 #12	UCK1 (ENSMODG00000012460) #13	POMT1 (ENSMODG00000012449) #14	PRRC2B (ENSMODG00000012428) #15	PLPP7 (ENSMODG00000012404) #16	FAM78A (ENSMODG00000012402) #17	NUP214 (ENSMODG00000012396) #18	AIF1L (ENSMODG00000046888) #19	LAMC3 (ENSMODG00000012155) #20	FIBCD1 (ENSMODG00000012138) #21	QRFP (ENSMODG00000012132) #22	ENSMODG00000012116	ABL1 (ENSMODG00000012126) #24	EXOSC2 (ENSMODG00000012114) #26	PRDM12 (ENSMODG00000012108) #27	FUBP3 (ENSMODG00000012105) #28	ASS1 (ENSMODG00000012093) #29	HMCN2 (ENSMODG00000011793) #30	NCS1 (ENSMODG00000007066)	ENSMODG00000049281	GPR107 (ENSMODG00000007041) #32	FNBP1 (ENSMODG00000006998) #33	USP20 (ENSMODG00000006916) #34	ENSMODG00000006832 #35	TOR1A (ENSMODG00000006810) #36	TOR1B (ENSMODG00000006789) #37
Sauria	ANCESTRAL SPECIES	33	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000154645.B	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Lepidosauria	ANCESTRAL SPECIES	21	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643	ENSGT00390000006784
Episquamata	ANCESTRAL SPECIES	15	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00940000165005	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643	ENSGT00390000006784
Laterata	ANCESTRAL SPECIES	75															ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35
Argentine black and white tegu	MODERN SPECIES	172													TOR1B (ENSSMRG00000005306) #37	TOR1A (ENSSMRG00000005355) #36	FIBCD1 (ENSSMRG00000005356) #21	QRFP (ENSSMRG00000005361) #22	ABL1 (ENSSMRG00000005362) #24	EXOSC2 (ENSSMRG00000005366) #26	PRDM12 (ENSSMRG00000005368) #27	FUBP3 (ENSSMRG00000005376) #28	ASS1 (ENSSMRG00000005392) #29	NCS1 (ENSSMRG00000005400)	GPR107 (ENSSMRG00000005408) #32	FNBP1 (ENSSMRG00000005413) #33	USP20 (ENSSMRG00000005441) #34	C9orf78 (ENSSMRG00000005460) #35
Common wall lizard	MODERN SPECIES	419	ENSPMRG00000023077	ENSPMRG00000023082	TSC1 (ENSPMRG00000023086)	SPACA9 (ENSPMRG00000023096)	ENSPMRG00000023108	GTF3C4 (ENSPMRG00000023112)	DDX31 (ENSPMRG00000023121)	BARHL1 (ENSPMRG00000023131)	ENSPMRG00000023137	ENSPMRG00000023139	ENSPMRG00000023146 #7	SETX (ENSPMRG00000023167) #8	REXO4 (ENSPMRG00000023178)	SURF4 (ENSPMRG00000023184)	FIBCD1 (ENSPMRG00000023194) #21	QRFP (ENSPMRG00000023204) #22	ABL1 (ENSPMRG00000023211) #24	EXOSC2 (ENSPMRG00000023223) #26	ENSPMRG00000023239	PRDM12 (ENSPMRG00000023242) #27	FUBP3 (ENSPMRG00000023247) #28	ASS1 (ENSPMRG00000023263) #29	ENSPMRG00000023273	GPR107 (ENSPMRG00000023279) #32	FNBP1 (ENSPMRG00000021708) #33	USP20 (ENSPMRG00000021885) #34	ENSPMRG00000021900	C9orf78 (ENSPMRG00000021909) #35	SET (ENSPMRG00000021931)	ZDHHC12 (ENSPMRG00000021947)	ZER1 (ENSPMRG00000021965)
tuatara	MODERN SPECIES	746										PLPP7 (ENSSPUG00000013116) #16	FAM78A (ENSSPUG00000013126) #17	NUP214 (ENSSPUG00000013183) #18	AIF1L (ENSSPUG00000013329) #19	LAMC3 (ENSSPUG00000013339) #20	FIBCD1 (ENSSPUG00000013366) #21	QRFP (ENSSPUG00000013374) #22	ABL1 (ENSSPUG00000013377) #24	EXOSC2 (ENSSPUG00000013391) #26	PRDM12 (ENSSPUG00000013424) #27	FUBP3 (ENSSPUG00000013444) #28	ASS1 (ENSSPUG00000013476) #29	ENSSPUG00000013499	ENSSPUG00000013532 #31	GPR107 (ENSSPUG00000013547) #32	FNBP1 (ENSSPUG00000013574) #33	ENSSPUG00000013609 #34	ENSSPUG00000013621 #34	ENSSPUG00000013627 #34	C9orf78 (ENSSPUG00000013636) #35	TOR1A (ENSSPUG00000013644) #36	TOR1B (ENSSPUG00000013659) #37
Archelosauria	ANCESTRAL SPECIES	32	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Archosauria	ANCESTRAL SPECIES	25	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Aves	ANCESTRAL SPECIES	21	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Neognathae	ANCESTRAL SPECIES	20	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00960000189405	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Neognathae_b	ANCESTRAL SPECIES	21	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00950000182888.a.a.a.i ##36	ENSGT00390000011980.b.b	ENSGT00940000161643
Neognathae_c	ANCESTRAL SPECIES	25	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00960000189405	ENSGT01030000238169	ENSGT00940000162328 #30	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37
Golden eagle	MODERN SPECIES	16	SETX (ENSACCG00020014176) #8	NTNG2 (ENSACCG00020014123) #9	MED27 (ENSACCG00020014108) #10	RAPGEF1 (ENSACCG00020013990) #11	PRRT1B (ENSACCG00020013892) #12	UCK1 (ENSACCG00020013870) #13	POMT1 (ENSACCG00020013833) #14	PRRC2B (ENSACCG00020013773) #15	PLPP7 (ENSACCG00020013730) #16	FAM78A (ENSACCG00020013701) #17	NUP214 (ENSACCG00020013676) #18	AIF1L (ENSACCG00020013647) #19	ENSACCG00020013632	ENSACCG00020013604 #20	FIBCD1 (ENSACCG00020013575) #21	QRFP (ENSACCG00020013555) #22	ABL1 (ENSACCG00020013528) #24	EXOSC2 (ENSACCG00020013462) #26	PRDM12 (ENSACCG00020013439) #27	FUBP3 (ENSACCG00020013398) #28	ASS1 (ENSACCG00020013345) #29	ENSACCG00020013322	ENSACCG00020013314	ENSACCG00020013275 #30	NCS1 (ENSACCG00020013184)	GPR107 (ENSACCG00020013158) #32	FNBP1 (ENSACCG00020013087) #33	USP20 (ENSACCG00020012961) #34	C9orf78 (ENSACCG00020012921) #35	TOR1A (ENSACCG00020012903) #36	TOR1B (ENSACCG00020012883) #37
Kakapo	MODERN SPECIES	9	SETX (ENSSHBG00005014399) #8	NTNG2 (ENSSHBG00005014433) #9	MED27 (ENSSHBG00005014439) #10	RAPGEF1 (ENSSHBG00005014669) #11	PRRT1B (ENSSHBG00005017020) #12	UCK1 (ENSSHBG00005017024) #13	POMT1 (ENSSHBG00005017043) #14	PRRC2B (ENSSHBG00005017075) #15	PLPP7 (ENSSHBG00005017094) #16	FAM78A (ENSSHBG00005017099) #17	NUP214 (ENSSHBG00005017113) #18	AIF1L (ENSSHBG00005017132) #19	ENSSHBG00005017138	ENSSHBG00005017142 #20	FIBCD1 (ENSSHBG00005017148) #21	QRFP (ENSSHBG00005017155) #22	ABL1 (ENSSHBG00005017161) #24	EXOSC2 (ENSSHBG00005000867) #26	PRDM12 (ENSSHBG00005011503) #27	FUBP3 (ENSSHBG00005011526) #28	ASS1 (ENSSHBG00005011556) #29	ENSSHBG00005011579	ENSSHBG00005011600 #30	NCS1 (ENSSHBG00005011616)	GPR107 (ENSSHBG00005011641) #32	FNBP1 (ENSSHBG00005011684) #33	USP20 (ENSSHBG00005011734) #34	C9orf78 (ENSSHBG00005011777) #35	TOR1A (ENSSHBG00005011800) #36	TOR1B (ENSSHBG00005011821) #37	PTGES (ENSSHBG00005011832)
Passeriformes	ANCESTRAL SPECIES	20	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643	ENSGT00390000006784
Passeriformes_d	ANCESTRAL SPECIES	20	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643	ENSGT00390000006784
Passeriformes_g	ANCESTRAL SPECIES	21	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643	ENSGT00390000006784
Passeroidea	ANCESTRAL SPECIES	21	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00390000011980.b.b	ENSGT00940000161643	ENSGT00390000006784
Common canary	MODERN SPECIES	22	SETX (ENSSCAG00000004025) #8	NTNG2 (ENSSCAG00000004051) #9	MED27 (ENSSCAG00000004058) #10	RAPGEF1 (ENSSCAG00000004064) #11	ENSSCAG00000004075	UCK1 (ENSSCAG00000004078) #13	POMT1 (ENSSCAG00000004082) #14	PRRC2B (ENSSCAG00000004089) #15	PLPP7 (ENSSCAG00000004112) #16	FAM78A (ENSSCAG00000004118) #17	NUP214 (ENSSCAG00000004176) #18	AIF1L (ENSSCAG00000004468) #19	ENSSCAG00000004472	ENSSCAG00000004478 #20	FIBCD1 (ENSSCAG00000004481) #21	QRFP (ENSSCAG00000004485) #22	ABL1 (ENSSCAG00000004492) #24	EXOSC2 (ENSSCAG00000004502) #26	PRDM12 (ENSSCAG00000004509) #27	FUBP3 (ENSSCAG00000004564) #28	ENSSCAG00000004830	ASS1 (ENSSCAG00000004836) #29	ENSSCAG00000004893 #31	GPR107 (ENSSCAG00000004896) #32	FNBP1 (ENSSCAG00000004913) #33	USP20 (ENSSCAG00000004943) #34	C9orf78 (ENSSCAG00000004957) #35	TOR1A (ENSSCAG00000004965) #36	TOR1B (ENSSCAG00000004972) #37	PTGES (ENSSCAG00000004981)	PRRX2 (ENSSCAG00000004986)
Zebra finch	MODERN SPECIES	8	ENSTGUG00000005102	TTF1 (ENSTGUG00000005125) #7	SETX (ENSTGUG00000005117) #8	NTNG2 (ENSTGUG00000005108) #9	MED27 (ENSTGUG00000005076) #10	RAPGEF1 (ENSTGUG00000005007) #11	UCK1 (ENSTGUG00000022263) #13	POMT1 (ENSTGUG00000004939) #14	PRRC2B (ENSTGUG00000004903) #15	PLPP7 (ENSTGUG00000004901) #16	FAM78A (ENSTGUG00000028321) #17	NUP214 (ENSTGUG00000004822) #18	AIF1L (ENSTGUG00000004809) #19	LAMC3 (ENSTGUG00000004775) #20	FIBCD1 (ENSTGUG00000004769) #21	QRFP (ENSTGUG00000025348) #22	ABL1 (ENSTGUG00000004720) #24	EXOSC2 (ENSTGUG00000004697) #26	PRDM12 (ENSTGUG00000004692) #27	FUBP3 (ENSTGUG00000004662) #28	ASS1 (ENSTGUG00000004656) #29	ENSTGUG00000022805	GPR107 (ENSTGUG00000004567) #32	FNBP1 (ENSTGUG00000004545) #33	C9orf78 (ENSTGUG00000004486) #35	USP20 (ENSTGUG00000004503) #34	TOR1A (ENSTGUG00000004463) #36	TOR1B (ENSTGUG00000004451) #37	PTGES (ENSTGUG00000028287)	PRRX2 (ENSTGUG00000027949)	ASB6 (ENSTGUG00000004412)
Great tit	MODERN SPECIES	7	SETX (ENSPMJG00000006725) #8	NTNG2 (ENSPMJG00000006737) #9	MED27 (ENSPMJG00000006745) #10	ENSPMJG00000006751	RAPGEF1 (ENSPMJG00000006780) #11	PRRT1B (ENSPMJG00000006804) #12	UCK1 (ENSPMJG00000006806) #13	POMT1 (ENSPMJG00000006808) #14	PRRC2B (ENSPMJG00000006813) #15	PLPP7 (ENSPMJG00000006820) #16	FAM78A (ENSPMJG00000006821) #17	NUP214 (ENSPMJG00000006822) #18	AIF1L (ENSPMJG00000006827) #19	LAMC3 (ENSPMJG00000006829) #20	FIBCD1 (ENSPMJG00000006832) #21	QRFP (ENSPMJG00000006836) #22	ABL1 (ENSPMJG00000006837) #24	EXOSC2 (ENSPMJG00000006842) #26	PRDM12 (ENSPMJG00000006843) #27	FUBP3 (ENSPMJG00000006848) #28	ASS1 (ENSPMJG00000006879) #29	ENSPMJG00000006913 #31	GPR107 (ENSPMJG00000006920) #32	FNBP1 (ENSPMJG00000006925) #33	USP20 (ENSPMJG00000006933) #34	C9orf78 (ENSPMJG00000006935) #35	TOR1A (ENSPMJG00000006936) #36	TOR1B (ENSPMJG00000006937) #37	PTGES (ENSPMJG00000006938)	PRRX2 (ENSPMJG00000006939)	ASB6 (ENSPMJG00000006940)
Galloanserae	ANCESTRAL SPECIES	22	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT01070000256962	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00950000182888.a.a.a.i ##36	ENSGT00390000011980.b.b	ENSGT00940000161643
Anatidae	ANCESTRAL SPECIES	13	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT01070000256962	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524.t #29	ENSGT00960000189405	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00950000182888.a.a.a.i ##36	ENSGT00390000011980.b.b	ENSGT00940000161643
Pink-footed goose	MODERN SPECIES	8	SETX (ENSABRG00000021209) #8	ENSABRG00000021202	NTNG2 (ENSABRG00000021198) #9	MED27 (ENSABRG00000021196) #10	RAPGEF1 (ENSABRG00000021162) #11	UCK1 (ENSABRG00000021134) #13	POMT1 (ENSABRG00000021073) #14	ENSABRG00000021060	PRRC2B (ENSABRG00000021033) #15	PLPP7 (ENSABRG00000021019) #16	FAM78A (ENSABRG00000021016) #17	NUP214 (ENSABRG00000020986) #18	AIF1L (ENSABRG00000020969) #19	LAMC3 (ENSABRG00000020944) #20	FIBCD1 (ENSABRG00000020932) #21	QRFP (ENSABRG00000020930) #22	ABL1 (ENSABRG00000020922) #24	EXOSC2 (ENSABRG00000020908) #26	PRDM12 (ENSABRG00000020900) #27	FUBP3 (ENSABRG00000020855) #28	ASS1 (ENSABRG00000020847) #29	ENSABRG00000020840	ENSABRG00000020834	NCS1 (ENSABRG00000020814)	GPR107 (ENSABRG00000020811) #32	FNBP1 (ENSABRG00000020798) #33	USP20 (ENSABRG00000020788) #34	C9orf78 (ENSABRG00000020779) #35	TOR1B (ENSABRG00000020777) #37	ENSABRG00000020775 ##36	PTGES (ENSABRG00000020771)
Duck	MODERN SPECIES	3549														LAMC3 (ENSAPLG00000012934) #20	FIBCD1 (ENSAPLG00000012871) #21	QRFP (ENSAPLG00000019268) #22
Phasianidae	ANCESTRAL SPECIES	20	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT01070000256962	ENSGT00950000183161.a.b #15	ENSGT00940000157147.g #16	ENSGT00940000157147.h #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00950000182888.a.a.a.i ##36	ENSGT00390000011980.b.b	ENSGT00940000161643
Phasianidae_b	ANCESTRAL SPECIES	19	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT01070000256962	ENSGT00950000183161.a.b #15	ENSGT00940000157147.g #16	ENSGT00940000157147.h #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00950000182888.a.a.a.i ##36	ENSGT00390000011980.b.b	ENSGT00940000161643
Chicken	MODERN SPECIES	8	MED27 (ENSGALG00010028438) #10	RAPGEF1 (ENSGALG00010028270) #11	PRRT1B (ENSGALG00010028205) #12	UCK1 (ENSGALG00010028198) #13	POMT1 (ENSGALG00010028175) #14	ENSGALG00010028167	PRRC2B (ENSGALG00010028157) #15	ENSGALG00010029144 #16	ENSGALG00010028148 #16	FAM78A (ENSGALG00010028144) #17	ENSGALG00010028143	NUP214 (ENSGALG00010028137) #18	AIF1L (ENSGALG00010027654) #19	LAMC3 (ENSGALG00010027632) #20	FIBCD1 (ENSGALG00010027622) #21	QRFP (ENSGALG00010028920) #22	ABL1 (ENSGALG00010027607) #24	EXOSC2 (ENSGALG00010027597) #26	PRDM12 (ENSGALG00010027588) #27	FUBP3 (ENSGALG00010028889) #28	ASS1 (ENSGALG00010027383) #29	NCS1 (ENSGALG00010028551) #31	GPR107 (ENSGALG00010028536) #32	FNBP1 (ENSGALG00010028514) #33	USP20 (ENSGALG00010028501) #34	C17H9orf78 (ENSGALG00010028498) #35	TOR1A (ENSGALG00010028493) #36	TOR1B (ENSGALG00010028491) #37	ENSGALG00010028489 ##36	PTGES (ENSGALG00010028488)	PRRX2 (ENSGALG00010028012)
Japanese quail	MODERN SPECIES	8	ENSCJPG00005006396 #7	SETX (ENSCJPG00005006122) #8	NTNG2 (ENSCJPG00005006108) #9	MED27 (ENSCJPG00005006101) #10	RAPGEF1 (ENSCJPG00005005477) #11	UCK1 (ENSCJPG00005005442) #13	POMT1 (ENSCJPG00005005203) #14	PRRC2B (ENSCJPG00005003775) #15	ENSCJPG00005003752 #16	ENSCJPG00005003750 #16	FAM78A (ENSCJPG00005003746) #17	NUP214 (ENSCJPG00005003464) #18	AIF1L (ENSCJPG00005003463) #19	LAMC3 (ENSCJPG00005002288) #20	FIBCD1 (ENSCJPG00005002254) #21	QRFP (ENSCJPG00005002248) #22	ABL1 (ENSCJPG00005002012) #24	EXOSC2 (ENSCJPG00005001981) #26	PRDM12 (ENSCJPG00005001974) #27	FUBP3 (ENSCJPG00005000185) #28	ASS1 (ENSCJPG00005000115) #29	NCS1 (ENSCJPG00005000105)	ENSCJPG00005000098	GPR107 (ENSCJPG00005000055) #32	FNBP1 (ENSCJPG00005020409) #33	USP20 (ENSCJPG00005020384) #34	C9orf78 (ENSCJPG00005020383) #35	TOR1A (ENSCJPG00005020382) #36	TOR1B (ENSCJPG00005020381) #37	ENSCJPG00005020380 ##36	PTGES (ENSCJPG00005020379)
Australian saltwater crocodile	MODERN SPECIES	44	ENSCPRG00005006540	TTF1 (ENSCPRG00005006533) #7	SETX (ENSCPRG00005006521) #8	NTNG2 (ENSCPRG00005006507) #9	MED27 (ENSCPRG00005006504) #10	RAPGEF1 (ENSCPRG00005006208) #11	UCK1 (ENSCPRG00005006129) #13	POMT1 (ENSCPRG00005006119) #14	PRRC2B (ENSCPRG00005004857) #15	PLPP7 (ENSCPRG00005004694) #16	FAM78A (ENSCPRG00005004692) #17	NUP214 (ENSCPRG00005004239) #18	AIF1L (ENSCPRG00005004173) #19	LAMC3 (ENSCPRG00005004150) #20	FIBCD1 (ENSCPRG00005004143) #21	QRFP (ENSCPRG00005004138) #22	ABL1 (ENSCPRG00005004133) #24	EXOSC2 (ENSCPRG00005004128) #26	PRDM12 (ENSCPRG00005004127) #27	FUBP3 (ENSCPRG00005004094) #28	ENSCPRG00005004082 #29	ENSCPRG00005004077 #29	ENSCPRG00005004076	ENSCPRG00005004065 #30	ENSCPRG00005004059 #31	GPR107 (ENSCPRG00005003958) #32	FNBP1 (ENSCPRG00005003896) #33	USP20 (ENSCPRG00005003875) #34	C9orf78 (ENSCPRG00005003869) #35	ENSCPRG00005003866 #36	ENSCPRG00005003861 #36
Cryptodira	ANCESTRAL SPECIES	33	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00910000145259	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00950000182888.a.a.a.i ##36	ENSGT00390000011980.b.b
Testudinoidea	ANCESTRAL SPECIES	23	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00950000182888.a.a.a.i ##36	ENSGT00390000011980.b.b
Testudinidae	ANCESTRAL SPECIES	29	ENSGT00390000014476.a	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00950000182888.a.a.a.i ##36	ENSGT00390000011980.b.b
Goode s thornscrub tortoise	MODERN SPECIES	7	ENSGEVG00005007254	TTF1 (ENSGEVG00005007201) #7	SETX (ENSGEVG00005007130) #8	NTNG2 (ENSGEVG00005007066) #9	MED27 (ENSGEVG00005007043) #10	RAPGEF1 (ENSGEVG00005005647) #11	UCK1 (ENSGEVG00005005247) #13	POMT1 (ENSGEVG00005005143) #14	PRRC2B (ENSGEVG00005004949) #15	PLPP7 (ENSGEVG00005004913) #16	FAM78A (ENSGEVG00005004902) #17	NUP214 (ENSGEVG00005004832) #18	AIF1L (ENSGEVG00005004766) #19	LAMC3 (ENSGEVG00005004675) #20	FIBCD1 (ENSGEVG00005004634) #21	QRFP (ENSGEVG00005004613) #22	ABL1 (ENSGEVG00005004543) #24	EXOSC2 (ENSGEVG00005004475) #26	PRDM12 (ENSGEVG00005004371) #27	FUBP3 (ENSGEVG00005004241) #28	ASS1 (ENSGEVG00005004170) #29	ENSGEVG00005021253	ENSGEVG00005021244 #31	GPR107 (ENSGEVG00005021241) #32	FNBP1 (ENSGEVG00005021238) #33	USP20 (ENSGEVG00005021231) #34	C9orf78 (ENSGEVG00005021227) #35	TOR1A (ENSGEVG00005021226) #36	TOR1B (ENSGEVG00005021224) #37	ENSGEVG00005021223 ##36	PTGES (ENSGEVG00005021221)
Abingdon island giant tortoise	MODERN SPECIES	2008						RAPGEF1 (ENSCABG00000006100) #11	UCK1 (ENSCABG00000006089) #13	POMT1 (ENSCABG00000005336) #14	PRRC2B (ENSCABG00000005273) #15	PLPP7 (ENSCABG00000005270) #16	FAM78A (ENSCABG00000005267) #17	NUP214 (ENSCABG00000005258) #18	AIF1L (ENSCABG00000005252) #19	LAMC3 (ENSCABG00000005244) #20	FIBCD1 (ENSCABG00000005237) #21	QRFP (ENSCABG00000005235) #22	ABL1 (ENSCABG00000004751) #24	EXOSC2 (ENSCABG00000004748) #26	PRDM12 (ENSCABG00000004747) #27	FUBP3 (ENSCABG00000004744) #28	ASS1 (ENSCABG00000004741) #29	ENSCABG00000004739	ENSCABG00000004735 #30	ENSCABG00000004730 #30	ENSCABG00000004729 #31	FNBP1 (ENSCABG00000004726) #33	USP20 (ENSCABG00000004721) #34	C9orf78 (ENSCABG00000004719) #35	TOR1A (ENSCABG00000004716) #36	TOR1B (ENSCABG00000004714) #37	ENSCABG00000004711 ##36
Emydidae	ANCESTRAL SPECIES	29	ENSGT00940000159729 #7	ENSGT00940000160918 #8	ENSGT00940000153601.a.a #9	ENSGT00390000012207 #10	ENSGT00940000156235 #11	ENSGT00940000163383 #12	ENSGT01020000230412.A.c.a #13	ENSGT00940000158049 #14	ENSGT00950000183161.a.b #15	ENSGT00940000157147 #16	ENSGT00390000018059.a #17	ENSGT00940000153253.b.b #18	ENSGT00390000013846.a.a #19	ENSGT00940000161559 #20	ENSGT00940000155976.a #21	ENSGT00390000015756 #22	ENSGT00940000153838.a #24	ENSGT00940000153596.B #26	ENSGT00940000161616 #27	ENSGT00940000156744 #28	ENSGT00390000004524 #29	ENSGT00940000162328 #30	ENSGT00940000163010 #31	ENSGT00940000160451 #32	ENSGT00950000183047.d #33	ENSGT00940000158829 #34	ENSGT00390000009787 #35	ENSGT00950000182888.a.a.a.j.b #36	ENSGT00950000182888.a.a.a.j.a #37	ENSGT00950000182888.a.a.a.i ##36	ENSGT00390000011980.b.b
Three-toed box turtle	MODERN SPECIES	113	TTF1 (ENSTMTG00000021249) #7	SETX (ENSTMTG00000021223) #8	NTNG2 (ENSTMTG00000021214) #9	MED27 (ENSTMTG00000021208) #10	RAPGEF1 (ENSTMTG00000019367) #11	PRRT1B (ENSTMTG00000019104) #12	UCK1 (ENSTMTG00000019090) #13	POMT1 (ENSTMTG00000019058) #14	PRRC2B (ENSTMTG00000018944) #15	PLPP7 (ENSTMTG00000018922) #16	FAM78A (ENSTMTG00000018911) #17	NUP214 (ENSTMTG00000018852) #18	AIF1L (ENSTMTG00000018820) #19	LAMC3 (ENSTMTG00000018760) #20	FIBCD1 (ENSTMTG00000018722) #21	QRFP (ENSTMTG00000018712) #22	ENSTMTG00000018695	ABL1 (ENSTMTG00000018647) #24	EXOSC2 (ENSTMTG00000018617) #26	PRDM12 (ENSTMTG00000018602) #27	FUBP3 (ENSTMTG00000018417) #28	ASS1 (ENSTMTG00000018363) #29	ENSTMTG00000018286 #30	ENSTMTG00000018264 #31	ENSTMTG00000018240 #32	FNBP1 (ENSTMTG00000018039) #33	USP20 (ENSTMTG00000016119) #34	C9orf78 (ENSTMTG00000015930) #35	TOR1A (ENSTMTG00000015923) #36	TOR1B (ENSTMTG00000015900) #37	ENSTMTG00000015831 ##36
painted turtle	MODERN SPECIES	716	TTF1 (ENSCPBG00000021220) #7	SETX (ENSCPBG00000021225) #8	NTNG2 (ENSCPBG00000021231) #9	MED27 (ENSCPBG00000021233) #10	RAPGEF1 (ENSCPBG00000021248) #11	UCK1 (ENSCPBG00000021525) #13	POMT1 (ENSCPBG00000021526) #14	PRRC2B (ENSCPBG00000021552) #15	ENSCPBG00000022580	PLPP7 (ENSCPBG00000022582) #16	FAM78A (ENSCPBG00000022584) #17	NUP214 (ENSCPBG00000022591) #18	AIF1L (ENSCPBG00000022607) #19	LAMC3 (ENSCPBG00000022610) #20	FIBCD1 (ENSCPBG00000022617) #21	QRFP (ENSCPBG00000022622) #22	ABL1 (ENSCPBG00000022624) #24	EXOSC2 (ENSCPBG00000022626) #26	PRDM12 (ENSCPBG00000022628) #27	FUBP3 (ENSCPBG00000022635) #28	ASS1 (ENSCPBG00000022650) #29	ENSCPBG00000022683 #31	ENSCPBG00000022697	FNBP1 (ENSCPBG00000022705) #33	USP20 (ENSCPBG00000022718) #34	C9orf78 (ENSCPBG00000022726) #35	TOR1A (ENSCPBG00000022729) #36	TOR1B (ENSCPBG00000022731) #37	ENSCPBG00000022732 ##36	PTGES (ENSCPBG00000022736)	PRRX2 (ENSCPBG00000022740)