Otomorpha	ANCESTRAL SPECIES	70	ENSGT00940000155521.a.b	ENSGT00940000174500	ENSGT00950000185626	ENSGT01060000248588.a.c.a.b	ENSGT00390000009004.c	ENSGT00940000155898.q	ENSGT00940000159553.a	ENSGT00940000163777.b.a.b	ENSGT00940000164725.a.b.a	ENSGT00940000160554.a	ENSGT00940000166432.c.b.b.a	ENSGT00990000204690 #18	ENSGT00940000158761.b #19	ENSGT00940000165390.b.d #20	ENSGT00940000158048.d #23	ENSGT00940000166176 #21	ENSGT00940000160629.a #28	ENSGT00940000166282.B #29	ENSGT00940000163701.b.a.a.a.b ##30	ENSGT00940000163701.b.a.b #30	ENSGT00940000160672 #31	ENSGT00940000158058.b #32	ENSGT00940000166430 #33	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT00940000159845.a.b #35	ENSGT00940000160323.a.b #36	ENSGT00940000160414.d #37	ENSGT00940000163776.a.b	ENSGT00940000159264.e	ENSGT00940000159217
Clupeiformes	ANCESTRAL SPECIES	165									ENSGT00940000164468.a.b.b.b	ENSGT00940000164983.c.a.a.b.a.b	ENSGT00940000163777.a	ENSGT00990000204690 #18	ENSGT00940000158761.b #19	ENSGT00940000165390.b.d #20	ENSGT00940000158048.d #23	ENSGT00940000166176 #21	ENSGT00940000160629.a #28	ENSGT00940000166282.B #29	ENSGT00940000163701.b.a.b #30	ENSGT00940000160672 #31	ENSGT00940000158058.b #32	ENSGT00940000166430 #33	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT00940000159845.a.b #35	ENSGT00940000160323.a.b #36	ENSGT00940000160414.d #37	ENSGT00940000163776.a.b	ENSGT00940000159264.e	ENSGT00940000159217	ENSGT00940000164382.a
Denticle herring	DUPLICATION
Denticle herring	DUPLICATION
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	16	TRPC5 (ENSDCDG00000002650) #7	alg13 (ENSDCDG00000002634) #8	ENSDCDG00000002630 #9	dacha (ENSDCDG00000002625) #10	chm (ENSDCDG00000002621) #11	ENSDCDG00000002617 #12	stk26 (ENSDCDG00000002601) #13	map4k6 (ENSDCDG00000002175) #14	rnf145b (ENSDCDG00000001986) #15	EBF1 (ENSDCDG00000001962) #16	CLINT1 (ENSDCDG00000001938) #17	ENSDCDG00000001931 #18	HRH2 (ENSDCDG00000001925) #19	ENSDCDG00000001920 #20	npm1a (ENSDCDG00000001918) #21	npm1a (ENSDCDG00000001915) #22	kcnip1b (ENSDCDG00000001912) #23	kcnip1b (ENSDCDG00000001900) #24	npm1a (ENSDCDG00000001887) #25	kcnip1b (ENSDCDG00000001875) #26	npm1a (ENSDCDG00000001867) #27	tlx3b (ENSDCDG00000001860) #28	ugt5g2 (ENSDCDG00000001854) #29	ponzr2 (ENSDCDG00000001848) #30	cldn7b (ENSDCDG00000001842) #31	FGF11 (ENSDCDG00000001836) #32	nlgn2b (ENSDCDG00000001808) #33	ENSDCDG00000001804 #34	GIGYF1 (ENSDCDG00000001794) #35	EFNB3 (ENSDCDG00000001783) #36	kdm6bb (ENSDCDG00000001779) #37
Denticle herring	MODERN SPECIES	16	ENSDCDG00000002655	TRPC5 (ENSDCDG00000002650) #7	alg13 (ENSDCDG00000002634) #8	ENSDCDG00000002630 #9	dacha (ENSDCDG00000002625) #10	chm (ENSDCDG00000002621) #11	ENSDCDG00000002617 #12	stk26 (ENSDCDG00000002601) #13	map4k6 (ENSDCDG00000002175) #14	rnf145b (ENSDCDG00000001986) #15	EBF1 (ENSDCDG00000001962) #16	CLINT1 (ENSDCDG00000001938) #17	ENSDCDG00000001931 #18	HRH2 (ENSDCDG00000001925) #19	ENSDCDG00000001920 #20	npm1a (ENSDCDG00000001918) #21	npm1a (ENSDCDG00000001915) #22	kcnip1b (ENSDCDG00000001912) #23	kcnip1b (ENSDCDG00000001900) #24	npm1a (ENSDCDG00000001887) #25	kcnip1b (ENSDCDG00000001875) #26	npm1a (ENSDCDG00000001867) #27	tlx3b (ENSDCDG00000001860) #28	ugt5g2 (ENSDCDG00000001854) #29	ponzr2 (ENSDCDG00000001848) #30	cldn7b (ENSDCDG00000001842) #31	FGF11 (ENSDCDG00000001836) #32	nlgn2b (ENSDCDG00000001808) #33	ENSDCDG00000001804 #34	GIGYF1 (ENSDCDG00000001794) #35	EFNB3 (ENSDCDG00000001783) #36
Denticle herring	MODERN SPECIES	16	dacha (ENSDCDG00000002625) #10	chm (ENSDCDG00000002621) #11	ENSDCDG00000002617 #12	stk26 (ENSDCDG00000002601) #13	map4k6 (ENSDCDG00000002175) #14	rnf145b (ENSDCDG00000001986) #15	EBF1 (ENSDCDG00000001962) #16	CLINT1 (ENSDCDG00000001938) #17	ENSDCDG00000001931 #18	HRH2 (ENSDCDG00000001925) #19	ENSDCDG00000001920 #20	npm1a (ENSDCDG00000001918) #21	npm1a (ENSDCDG00000001915) #22	kcnip1b (ENSDCDG00000001912) #23	kcnip1b (ENSDCDG00000001900) #24	npm1a (ENSDCDG00000001887) #25	kcnip1b (ENSDCDG00000001875) #26	npm1a (ENSDCDG00000001867) #27	tlx3b (ENSDCDG00000001860) #28	ugt5g2 (ENSDCDG00000001854) #29	ponzr2 (ENSDCDG00000001848) #30	cldn7b (ENSDCDG00000001842) #31	FGF11 (ENSDCDG00000001836) #32	nlgn2b (ENSDCDG00000001808) #33	ENSDCDG00000001804 #34	GIGYF1 (ENSDCDG00000001794) #35	EFNB3 (ENSDCDG00000001783) #36	kdm6bb (ENSDCDG00000001779) #37	tmem88a (ENSDCDG00000001778)	pcolcea (ENSDCDG00000001773)	vamp2 (ENSDCDG00000001770)
Denticle herring	MODERN SPECIES	16	ENSDCDG00000002617 #12	stk26 (ENSDCDG00000002601) #13	map4k6 (ENSDCDG00000002175) #14	rnf145b (ENSDCDG00000001986) #15	EBF1 (ENSDCDG00000001962) #16	CLINT1 (ENSDCDG00000001938) #17	ENSDCDG00000001931 #18	HRH2 (ENSDCDG00000001925) #19	ENSDCDG00000001920 #20	npm1a (ENSDCDG00000001918) #21	npm1a (ENSDCDG00000001915) #22	kcnip1b (ENSDCDG00000001912) #23	kcnip1b (ENSDCDG00000001900) #24	npm1a (ENSDCDG00000001887) #25	kcnip1b (ENSDCDG00000001875) #26	npm1a (ENSDCDG00000001867) #27	tlx3b (ENSDCDG00000001860) #28	ugt5g2 (ENSDCDG00000001854) #29	ponzr2 (ENSDCDG00000001848) #30	cldn7b (ENSDCDG00000001842) #31	FGF11 (ENSDCDG00000001836) #32	nlgn2b (ENSDCDG00000001808) #33	ENSDCDG00000001804 #34	GIGYF1 (ENSDCDG00000001794) #35	EFNB3 (ENSDCDG00000001783) #36	kdm6bb (ENSDCDG00000001779) #37	tmem88a (ENSDCDG00000001778)	pcolcea (ENSDCDG00000001773)	vamp2 (ENSDCDG00000001770)	and3 (ENSDCDG00000001764)	ap4m1 (ENSDCDG00000001744)
Otophysi	ANCESTRAL SPECIES	18	ENSGT00940000155521.a.b	ENSGT00940000174500	ENSGT01060000248588.a.c.a.b	ENSGT00390000009004.c	ENSGT00940000155898.q	ENSGT00940000159553.a	ENSGT00940000163777.b.a.b	ENSGT00940000164725.a.b.a	ENSGT00940000160554.a	ENSGT00940000166432.d.g	ENSGT00940000178703	ENSGT00990000204690 #18	ENSGT00940000158761.b #19	ENSGT00940000165390.b.c.b ##20	ENSGT00940000158048.d #23	ENSGT00940000166176 #21	ENSGT00940000160629.a #28	ENSGT00940000166282.B #29	ENSGT00940000163701.b.a.a.a.b ##30	ENSGT00940000163701.b.a.b #30	ENSGT00940000174541.b	ENSGT00940000160672 #31	ENSGT00940000158058.b #32	ENSGT00940000166430 #33	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT00940000159845.a.b #35	ENSGT00940000160323.a.b #36	ENSGT00940000160414.d #37	ENSGT00940000163776.a.b	ENSGT00940000159264.e
Characiphysae	ANCESTRAL SPECIES	42	ENSGT00940000174500	ENSGT01060000248588.a.c.a.b	ENSGT00390000009004.c	ENSGT00940000158371	ENSGT00390000009004.d	ENSGT00940000155898.r	ENSGT00940000159553.a	ENSGT00940000163777.b.a.b	ENSGT00940000164725.a.b.a	ENSGT00940000164173.a.b	ENSGT00940000164173.b.a.c.b	ENSGT00990000204690 #18	ENSGT00940000158761.b #19	ENSGT00940000165390.b.d #20	ENSGT00940000158048.d #23	ENSGT00940000166176 #21	ENSGT00940000160629.a #28	ENSGT00940000166282.B #29	ENSGT00940000163701.b.a.a.a.b ##30	ENSGT00940000163701.b.a.b #30	ENSGT00940000174541.b	ENSGT00940000160672 #31	ENSGT00940000158058.b #32	ENSGT00940000166430 #33	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT00940000159845.a.b #35	ENSGT00940000160323.a.b #36	ENSGT00940000160414.d #37	ENSGT00940000163776.a.b	ENSGT00940000159264.e
Channel catfish	MODERN SPECIES	7	ENSIPUG00000020022	ENSIPUG00000020016	ENSIPUG00000020006	ENSIPUG00000019966	ENSIPUG00000019960	ENSIPUG00000019943	ENSIPUG00000019937	pcdh1gc5 (ENSIPUG00000019913)	ENSIPUG00000019907	ENSIPUG00000019821	ENSIPUG00000019799 #18	HRH2 (ENSIPUG00000019788) #19	ENSIPUG00000019762 #20	ENSIPUG00000019562 #20	kcnip1b (ENSIPUG00000019503) #23	npm1 (ENSIPUG00000019452) #21	tlx3b (ENSIPUG00000019432) #28	ENSIPUG00000019418 ##30	ponzr2 (ENSIPUG00000019403) #30	cldn7b (ENSIPUG00000019390) #31	ENSIPUG00000019379 #32	nlgn2b (ENSIPUG00000019333) #33	GIGYF1 (ENSIPUG00000019293) #35	EFNB3 (ENSIPUG00000019274) #36	kdm6bb (ENSIPUG00000019157) #37	tmem88a (ENSIPUG00000019150)	pcolcea (ENSIPUG00000019138)	vamp2 (ENSIPUG00000019130)	and3 (ENSIPUG00000019118)	AP4M1 (ENSIPUG00000019060)	foxo1b (ENSIPUG00000019054)
Characiphysae_b	ANCESTRAL SPECIES	79						ENSGT00940000164468.a.a.b.a.a.a.a.a	ENSGT00940000164468.a.b.a.b.e	ENSGT00940000164983.d.b	ENSGT00940000164983.c.a.a.a	ENSGT00940000163777.a.j.b	ENSGT00390000017848	ENSGT00940000158761.b #19	ENSGT00940000165390.b.d #20	ENSGT00940000175544	ENSGT00940000158048.d #23	ENSGT00940000166176 #21	ENSGT00940000160629.a #28	ENSGT00940000166282.B #29	ENSGT00940000163701.b.a.a.a.b ##30	ENSGT00940000163701.b.a.b #30	ENSGT00940000174541.b	ENSGT00940000160672 #31	ENSGT00940000158058.b #32	ENSGT00940000166430 #33	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT00940000159845.a.b #35	ENSGT00940000160323.a.b #36	ENSGT00940000160414.d #37	ENSGT00940000163776.a.b	ENSGT00940000159264.e
Characoidei	ANCESTRAL SPECIES	40	ENSGT00940000164173.b.a.c.b	ENSGT00940000164173.b.a.c.a.b.d	ENSGT00940000164173.b.a.c.a.a.b	ENSGT00940000164173.b.a.c.a.b.c	ENSGT00940000164173.b.a.c.a.a.a	ENSGT00940000160554.a	ENSGT00940000166432.d.g.b.a	ENSGT00940000178703	ENSGT00940000164468.a.a.b.b.f.b.a	ENSGT00940000164983.c.a.a.b.b	ENSGT00390000017848	ENSGT00940000158761.b #19	ENSGT00940000165390.b.d #20	ENSGT00940000175544	ENSGT00940000158048.d #23	ENSGT00940000166176 #21	ENSGT00940000160629.a #28	ENSGT00940000166282.B #29	ENSGT00940000163701.b.a.a.a.b ##30	ENSGT00940000163701.b.a.b #30	ENSGT00940000174541.b	ENSGT00940000160672 #31	ENSGT00940000158058.b #32	ENSGT00940000166430 #33	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT00940000159845.a.b #35	ENSGT00940000160323.a.b #36	ENSGT00940000160414.d #37	ENSGT00940000163776.a.b	ENSGT00940000159264.e
Red-bellied piranha	MODERN SPECIES	659					ENSPNAG00000026555	ENSPNAG00000026573	ENSPNAG00000026601	ENSPNAG00000007141	HRH2 (ENSPNAG00000026629) #19	ENSPNAG00000005029 #20	ENSPNAG00000026750 #20	ENSPNAG00000006145	ENSPNAG00000004111 #20	ENSPNAG00000026804 #20	kcnip1b (ENSPNAG00000026866) #23	npm1a (ENSPNAG00000026891) #21	tlx3b (ENSPNAG00000026910) #28	ugt5g2 (ENSPNAG00000026927) #29	ENSPNAG00000004970 ##30	ponzr2 (ENSPNAG00000004150) #30	ENSPNAG00000026957	cldn7b (ENSPNAG00000027073) #31
Mexicana tetra	MODERN SPECIES	12	pcdh1g22 (ENSAMXG00000034249)	pcdh1gc5 (ENSAMXG00000034526)	ENSAMXG00000035279	ENSAMXG00000010048	ENSAMXG00000033944	ENSAMXG00000010061	ENSAMXG00000040958	HRH2 (ENSAMXG00000032087) #19	ENSAMXG00000010091 #20	ENSAMXG00000040407 #20	ENSAMXG00000033777	ENSAMXG00000031328 #20	ENSAMXG00000034384 #20	ENSAMXG00000010127	kcnip1b (ENSAMXG00000033269) #23	npm1a (ENSAMXG00000010155) #21	tlx3b (ENSAMXG00000043493) #28	ENSAMXG00000034892 ##30	ENSAMXG00000043487	ponzr2 (ENSAMXG00000038603) #30	ENSAMXG00000043923	ENSAMXG00000041907	ENSAMXG00000032409	cldn7b (ENSAMXG00000043439) #31	ENSAMXG00000029655	ENSAMXG00000010260 #32	nlgn2b (ENSAMXG00000010270) #33	ENSAMXG00000031254	ENSAMXG00000039541	ENSAMXG00000041670	ENSAMXG00000037150
Electric eel	MODERN SPECIES	667								ENSEEEG00000001402	ENSEEEG00000001401	ENSEEEG00000001399	pcdh1g32 (ENSEEEG00000001383)	hrh2b (ENSEEEG00000001379)	ENSEEEG00000001378 #20	ENSEEEG00000001377	kcnip1b (ENSEEEG00000001376) #23	npm1a (ENSEEEG00000001373) #21	tlx3b (ENSEEEG00000001370) #28	ENSEEEG00000001369 ##30	ponzr2 (ENSEEEG00000001368) #30	cldn7b (ENSEEEG00000001364) #31	ENSEEEG00000001359 #32
Cyprinoidei	ANCESTRAL SPECIES	6	ENSGT00940000158782.d.b	ENSGT00940000155521.a.b	ENSGT00940000174500	ENSGT01060000248588.a.c.a.b	ENSGT00390000009004.c	ENSGT00940000155898.q	ENSGT00940000159553.a	ENSGT00940000163777.b.a.b	ENSGT00940000164725.a.b.a	ENSGT00940000160554.a	ENSGT00940000166432.c.b.b.a.b.b.b	ENSGT00940000167565	ENSGT00940000165390.b.d.h #20	ENSGT00940000165390.b.d.g.b #20	ENSGT00940000158048.d #23	ENSGT00940000166176 #21	ENSGT00940000160629.a #28	ENSGT00940000166282.B #29	ENSGT00940000163701.b.a.a.a.b ##30	ENSGT00940000163701.b.a.b #30	ENSGT00940000174541.b	ENSGT00940000160672 #31	ENSGT00940000158058.b #32	ENSGT00940000166430 #33	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT00940000159845.a.b #35	ENSGT00940000160323.a.b #36	ENSGT00940000160414.d #37	ENSGT00940000163776.a.b	ENSGT00940000176904.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	333													ENSGT00940000167565.a	ENSGT00940000165390.b.d.g.b.a.a.b #20	ENSGT00940000158048.d.d #23	ENSGT00940000166176.a #21	ENSGT00940000160629.a.c #28	ENSGT00940000166282.B.a #29	ENSGT00940000163701.b.a.a.a.b.e.b ##30	ENSGT00940000163701.b.a.a.a.b.f ##30	ENSGT00940000163701.b.a.b.c #30	ENSGT00940000160672.b #31	ENSGT00940000158058.b.k.b #32	ENSGT00940000166430.d #33	ENSGT00390000017226.k.b	ENSGT01030000234592.A.b.b.a.b.a.b.c.a	ENSGT01030000234592.A.b.b.a.b.b.b.b	ENSGT00940000159845.a.b.a #35	ENSGT00940000160323.a.b.b #36	ENSGT00940000160414.d.c #37	ENSGT00940000163776.a.b.d
Cyprininae_a	ANCESTRAL SPECIES	293												ENSGT00940000167565.a	ENSGT00940000165390.b.d.g.b.a.a.b #20	ENSGT00940000165390.b.c.b ##20	ENSGT00940000158048.d.d #23	ENSGT00940000166176.a #21	ENSGT00940000160629.a.c #28	ENSGT00940000166282.B.a #29	ENSGT00940000163701.b.a.a.a.b.e.b ##30	ENSGT00940000163701.b.a.a.a.b.f.a ##30	ENSGT00940000163701.b.a.b.c #30	ENSGT00940000160672.a #31	ENSGT00940000160672.b.b #31	ENSGT00940000158058.b.k.b #32	ENSGT00940000166430.d #33	ENSGT00390000017226.k.b	ENSGT01030000234592.A.b.b.a.b.a.b.c.a	ENSGT01030000234592.A.b.b.a.b.b.b.b	ENSGT00940000159845.a.b.a #35	ENSGT00940000160323.a.b.b #36	ENSGT00940000160414.d.c #37
Common carp reference	MODERN SPECIES	32	ENSCCRG00000081151	avd (ENSCCRG00000038982)	etf1b (ENSCCRG00000031059)	fbxw11b (ENSCCRG00000017773)	fgf18b (ENSCCRG00000064499)	ENSCCRG00000007274	ENSCCRG00000003523	ENSCCRG00000080636	pcdh1g31 (ENSCCRG00000055289)	ENSCCRG00000044558 #18	hrh2b (ENSCCRG00000044553)	ENSCCRG00000044543 #20	ENSCCRG00000024545 #20	ENSCCRG00000082198	kcnip1b (ENSCCRG00000073511) #23	npm1a (ENSCCRG00000068898) #21	ENSCCRG00000076971	tlx3b (ENSCCRG00000024597) #28	ENSCCRG00000078589 ##30	ENSCCRG00000067679 ##30	ponzr2 (ENSCCRG00000073185) #30	cldn7b (ENSCCRG00000058719) #31	ENSCCRG00000069985 #32	nlgn2b (ENSCCRG00000020748) #33	epob (ENSCCRG00000019487)	ENSCCRG00000019473	zgc:172339 (ENSCCRG00000042141)	ENSCCRG00000067150 #35	ENSCCRG00000071610 #36	kdm6bb (ENSCCRG00000058827) #37	tmem88a (ENSCCRG00000064126)
Golden-line barbel	MODERN SPECIES	77	ENSSGRG00000047630	ENSSGRG00000047631	ENSSGRG00000047632	ENSSGRG00000047635	ENSSGRG00000047636	ENSSGRG00000047641	ENSSGRG00000047642	cbln17 (ENSSGRG00000047643)	ENSSGRG00000047644	hrh2b (ENSSGRG00000047645)	ENSSGRG00000047646 #20	ENSSGRG00000047659 #20	ENSSGRG00000047661 #20	ENSSGRG00000047668 ##20	kcnip1b (ENSSGRG00000047669) #23	npm1a (ENSSGRG00000047679) #21	tlx3b (ENSSGRG00000047680) #28	ugt5g2 (ENSSGRG00000047682) #29	ENSSGRG00000047684 ##30	ENSSGRG00000047690 ##30	cldn7b (ENSSGRG00000047702) #31	ENSSGRG00000047705 #32	nlgn2b (ENSSGRG00000047711) #33	epob (ENSSGRG00000047999)	ENSSGRG00000048000	zgc:172339 (ENSSGRG00000048001)	GIGYF1 (ENSSGRG00000048003) #35	ENSSGRG00000048007 #36	kdm6bb (ENSSGRG00000048008) #37	tmem88a (ENSSGRG00000048010)	pcolcea (ENSSGRG00000048012)
Goldfish	MODERN SPECIES	28	tjp2a (ENSCARG00000019398)	ENSCARG00000022951	MAMDC2 (ENSCARG00000022963)	zfand5b (ENSCARG00000023005)	erbin (ENSCARG00000023042)	nln (ENSCARG00000023676)	sgtb (ENSCARG00000024701)	trappc13 (ENSCARG00000024749)	pum3 (ENSCARG00000024944)	KCNV2 (ENSCARG00000025308)	vldlr (ENSCARG00000025678)	ENSCARG00000040388	hrh2b (ENSCARG00000040399)	ENSCARG00000040442 #20	kcnip1b (ENSCARG00000040653) #23	npm1a (ENSCARG00000040800) #21	tlx3b (ENSCARG00000040816) #28	ugt5g2 (ENSCARG00000040831) #29	ENSCARG00000040842 ##30	ENSCARG00000040881 ##30	ponzr2 (ENSCARG00000040893) #30	cldn7b (ENSCARG00000040904) #31	ENSCARG00000040916 #32	nlgn2b (ENSCARG00000040995) #33	ENSCARG00000041626	zgc:172339 (ENSCARG00000041632)	GIGYF1 (ENSCARG00000041644) #35	ENSCARG00000041698 #36	kdm6bb (ENSCARG00000041723) #37	tmem88a (ENSCARG00000041885)	pcolcea (ENSCARG00000041907)
Cyprininae	ANCESTRAL SPECIES	778														ENSGT00940000165390.b.d.h #20	ENSGT00940000158048.d.c #23	ENSGT00940000166176.b #21	ENSGT00940000160629.a.d #28	ENSGT00940000166282.B.b #29	ENSGT00940000163701.b.a.a.a.b.e.a ##30	ENSGT00940000163701.b.a.b.d.b #30	ENSGT00940000163701.b.a.b.d.a #30	ENSGT00940000160672.a #31	ENSGT00940000158058.b.k.a #32
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1	ENSCARG00000012707 #18	cbln17 (ENSCARG00000012715)	ENSCARG00000012732	ENSCARG00000012788	pcdh1gc5 (ENSCARG00000012793)	ENSCARG00000012797	ENSCARG00000012801	ENSCARG00000012803	ENSCARG00000012806	loxl2a (ENSCARG00000012846)	golga7 (ENSCARG00000013252)	ENSCARG00000013262 #20	ENSCARG00000013284 #20	ENSCARG00000013345 #20	kcnip1b (ENSCARG00000013351) #23	npm1a (ENSCARG00000013362) #21	tlx3b (ENSCARG00000013368) #28	ENSCARG00000013373 ##30	ponzr2 (ENSCARG00000013370) #30	ponzr2 (ENSCARG00000013377) #30	cldn7b (ENSCARG00000013380) #31	ENSCARG00000013387 #32	ENSCARG00000013390	ENSCARG00000013392	ENSCARG00000013396	ENSCARG00000013401	ENSCARG00000013404	ENSCARG00000013412	fgf18b (ENSCARG00000013420)	fbxw11b (ENSCARG00000013466)	etf1b (ENSCARG00000014436)
Goldfish	MODERN SPECIES	2952														ENSCARG00000061919 #20	kcnip1b (ENSCARG00000061956) #23	npm1a (ENSCARG00000062032) #21
Cyprininae_a	ANCESTRAL SPECIES	231		ENSGT00940000164173.b.a.d	ENSGT00940000160554.a.b	ENSGT00940000166432.c.b.b.a.b.b.b	ENSGT00940000166432.c.b.b.a.b.a	ENSGT00940000165759.f.c.b	ENSGT00940000164468.a.a.b.b.f.d.b.a	ENSGT00940000164468.a.a.b.b.f.d.b.b	ENSGT00940000164468.a.b.b.b.a	ENSGT00940000164983.c.a.a.b.b	ENSGT00940000164983.c.a.a.a.a.a.a	ENSGT00940000167565.b	ENSGT00940000165390.b.d.g.b.b #20	ENSGT00940000165390.b.d.g.b.a.a.a.a #20	ENSGT00940000158048.d.c #23	ENSGT00940000166176.b #21	ENSGT00940000160629.a.d #28	ENSGT00940000166282.B.b #29	ENSGT00940000163701.b.a.a.a.b.e.a ##30	ENSGT00940000163701.b.a.a.a.b.f.b ##30	ENSGT00940000163701.b.a.b.d.b #30	ENSGT00940000163701.b.a.b.d.a #30	ENSGT00940000174541.b	ENSGT00940000160672.b.a #31	ENSGT00940000158058.b.k.a #32	ENSGT00940000158058.b.l #32	ENSGT00940000166430.c #33	ENSGT00390000017226.k.a	ENSGT01030000234592.A.b.b.a.b.a.b.c.b	ENSGT01030000234592.A.b.b.a.b.b.b.a	ENSGT00940000159845.a.b.b #35
Common carp reference	MODERN SPECIES	24	fbxw11b (ENSCCRG00000005117)	fgf18b (ENSCCRG00000066307)	ENSCCRG00000005098	ENSCCRG00000081101	ENSCCRG00000005080	ENSCCRG00000026899	ENSCCRG00000026895	pcdh1a6 (ENSCCRG00000071127)	ENSCCRG00000058111	cbln17 (ENSCCRG00000080170)	ENSCCRG00000038102	hrh2b (ENSCCRG00000038098)	ENSCCRG00000050194 #20	ENSCCRG00000061744 #20	kcnip1b (ENSCCRG00000075219) #23	npm1a (ENSCCRG00000068283) #21	tlx3b (ENSCCRG00000049801) #28	ugt5g2 (ENSCCRG00000026507) #29	ENSCCRG00000026513 ##30	ENSCCRG00000026564 ##30	ponzr2 (ENSCCRG00000049807) #30	ponzr2 (ENSCCRG00000068605) #30	ENSCCRG00000078150	cldn7b (ENSCCRG00000049811) #31	ENSCCRG00000075872 #32	nlgn2b (ENSCCRG00000064856) #33	epob (ENSCCRG00000056696)	ENSCCRG00000053626	zgc:172339 (ENSCCRG00000082842)	ENSCCRG00000019477 #35	ENSCCRG00000058557 #36
Golden-line barbel	MODERN SPECIES	439	ENSSGRG00000055366	ENSSGRG00000055365	ENSSGRG00000055364	ENSSGRG00000055363	ENSSGRG00000055362	pcdh1g22 (ENSSGRG00000055361)	ENSSGRG00000055360	pcdh1gc5 (ENSSGRG00000055359)	hrh2b (ENSSGRG00000055356)	ENSSGRG00000055355 #20	ENSSGRG00000055354 #20	ENSSGRG00000055353 #20	ENSSGRG00000055352 #20	ENSSGRG00000055350 #20	kcnip1b (ENSSGRG00000055348) #23	npm1a (ENSSGRG00000055347) #21	tlx3b (ENSSGRG00000055346) #28	ugt5g2 (ENSSGRG00000055345) #29	ENSSGRG00000055344 ##30	ENSSGRG00000055339 ##30	ponzr2 (ENSSGRG00000055338) #30	cldn7b (ENSSGRG00000055336) #31	ENSSGRG00000055335 #32
Zebrafish	MODERN SPECIES	1	pcdh1g18 (ENSDARG00000099447)	pcdh1g33 (ENSDARG00000099035)	pcdh1g26 (ENSDARG00000099931)	pcdh1gc5 (ENSDARG00000104826)	pcdh1gc6 (ENSDARG00000103950)	pcdh1g29 (ENSDARG00000104497)	pcdh1g30 (ENSDARG00000101865)	pcdh1g31 (ENSDARG00000100670)	pcdh1g32 (ENSDARG00000100829)	ENSDARG00000112040	cbln17 (ENSDARG00000088911)	hrh2b (ENSDARG00000057479)	ENSDARG00000112454 #20	ENSDARG00000107280 #20	kcnip1b (ENSDARG00000034808) #23	npm1a (ENSDARG00000014329) #21	tlx3b (ENSDARG00000017615) #28	ugt5g2 (ENSDARG00000043901) #29	ENSDARG00000087764 ##30	ENSDARG00000109946 ##30	ENSDARG00000008182	ponzr2 (ENSDARG00000088539) #30	ENSDARG00000097477	cldn7b (ENSDARG00000014047) #31	ENSDARG00000043907 #32	nlgn2b (ENSDARG00000079251) #33	epob (ENSDARG00000100737)	ENSDARG00000117144	zgc:172339 (ENSDARG00000069190)	GIGYF1 (ENSDARG00000078691) #35	ENSDARG00000112993 #36