Tetrapoda	ANCESTRAL SPECIES																	ENSGT00940000162099 #22
Amniota	ANCESTRAL SPECIES	75	ENSGT00390000017226	ENSGT00510000048483	ENSGT00940000159845	ENSGT01000000214413.b.b	ENSGT00940000160860	ENSGT01030000234598.a.a.b	ENSGT00940000164913	ENSGT00560000077278.a	ENSGT00940000153993.A	ENSGT00390000004198	ENSGT00940000161400	ENSGT00890000139453.a	ENSGT00940000161071	ENSGT00940000166370	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000163250.A	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT00940000156309.A #25
Mammalia	ANCESTRAL SPECIES	58	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00940000165567	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000160598 #35	ENSGT00390000000334 #36
Theria	ANCESTRAL SPECIES	32	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00940000160598 #35
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517
Primates	ANCESTRAL SPECIES	3	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517
Haplorrhini	ANCESTRAL SPECIES	29	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Simiiformes	ANCESTRAL SPECIES	23	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Catarrhini	ANCESTRAL SPECIES	24	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Hominoidea	ANCESTRAL SPECIES	25	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Gibbon	MODERN SPECIES	9	CHD3 (ENSNLEG00000009770) #7	ENSNLEG00000027601 #8	CYB5D1 (ENSNLEG00000009777) #9	TMEM88 (ENSNLEG00000009773) #10	KDM6B (ENSNLEG00000036136) #11	DNAH2 (ENSNLEG00000009763) #12	ENSNLEG00000009761 #13	WRAP53 (ENSNLEG00000009753) #14	TP53 (ENSNLEG00000009730) #15	ATP1B2 (ENSNLEG00000009726) #16	ENSNLEG00000018259 #17	SHBG (ENSNLEG00000009705) #18	SAT2 (ENSNLEG00000009698) #19	FXR2 (ENSNLEG00000009662) #20	MPDU1 (ENSNLEG00000009643) #21	SOX15 (ENSNLEG00000009660) #22	CD68 (ENSNLEG00000009633) #23	EIF4A1 (ENSNLEG00000009547) #24	SENP3 (ENSNLEG00000009529) #25	TNFSF13 (ENSNLEG00000009510) #26	TNFSF12 (ENSNLEG00000029187) #27	POLR2A (ENSNLEG00000009460) #28	ENSNLEG00000009458 #29	ENSNLEG00000030377 #30	FGF11 (ENSNLEG00000009446) #31	ENSNLEG00000009444 #32	ENSNLEG00000030627 #33	SPEM1 (ENSNLEG00000009442) #34	NLGN2 (ENSNLEG00000009440) #35	TMEM256 (ENSNLEG00000035393) #36	PLSCR3 (ENSNLEG00000009414) #37
Hominidae	ANCESTRAL SPECIES	20	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c.a #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c.a #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Pan	ANCESTRAL SPECIES	3	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c.a #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Chimpanzee	MODERN SPECIES	8	KCNAB3 (ENSPTRG00000008716)	RNF227 (ENSPTRG00000043140)	CHD3 (ENSPTRG00000008714) #7	CYB5D1 (ENSPTRG00000008713) #9	NAA38 (ENSPTRG00000008712) #8	TMEM88 (ENSPTRG00000008711) #10	KDM6B (ENSPTRG00000008710) #11	DNAH2 (ENSPTRG00000008709) #12	EFNB3 (ENSPTRG00000046966) #13	WRAP53 (ENSPTRG00000008705) #14	TP53 (ENSPTRG00000008703) #15	ATP1B2 (ENSPTRG00000008701) #16	SHBG (ENSPTRG00000008700) #18	SAT2 (ENSPTRG00000008699) #19	FXR2 (ENSPTRG00000008698) #20	SOX15 (ENSPTRG00000008697) #22	MPDU1 (ENSPTRG00000008696) #21	CD68 (ENSPTRG00000008695) #23	EIF4A1 (ENSPTRG00000008694) #24	SENP3 (ENSPTRG00000008693) #25	TNFSF13 (ENSPTRG00000008692) #26	TNFSF12 (ENSPTRG00000040723) #27	POLR2A (ENSPTRG00000008691) #28	SLC35G6 (ENSPTRG00000042155) #29	ZBTB4 (ENSPTRG00000008690) #30	CHRNB1 (ENSPTRG00000008689)	FGF11 (ENSPTRG00000050130) #31	TMEM102 (ENSPTRG00000008688)	SPEM3 (ENSPTRG00000046239)	SPEM2 (ENSPTRG00000008686) #33	SPEM1 (ENSPTRG00000008685) #34
Bonobo	MODERN SPECIES	8	KCNAB3 (ENSPPAG00000018201)	RNF227 (ENSPPAG00000040198)	CHD3 (ENSPPAG00000032886) #7	CYB5D1 (ENSPPAG00000037753) #9	ENSPPAG00000026097 #8	TMEM88 (ENSPPAG00000035566) #10	KDM6B (ENSPPAG00000033078) #11	DNAH2 (ENSPPAG00000038375) #12	EFNB3 (ENSPPAG00000028302) #13	WRAP53 (ENSPPAG00000041493) #14	TP53 (ENSPPAG00000028702) #15	ATP1B2 (ENSPPAG00000035739) #16	SHBG (ENSPPAG00000040598) #18	SAT2 (ENSPPAG00000039838) #19	FXR2 (ENSPPAG00000029387) #20	SOX15 (ENSPPAG00000039096) #22	MPDU1 (ENSPPAG00000040485) #21	CD68 (ENSPPAG00000026476) #23	EIF4A1 (ENSPPAG00000039921) #24	SENP3 (ENSPPAG00000006924) #25	TNFSF13 (ENSPPAG00000025960) #26	TNFSF12 (ENSPPAG00000037412) #27	POLR2A (ENSPPAG00000043734) #28	ZBTB4 (ENSPPAG00000039063) #30	CHRNB1 (ENSPPAG00000035976)	FGF11 (ENSPPAG00000034383) #31	TMEM102 (ENSPPAG00000030935)	SPEM3 (ENSPPAG00000030365)	SPEM2 (ENSPPAG00000039663) #33	SPEM1 (ENSPPAG00000043589) #34	ENSPPAG00000039960 #35
Human	MODERN SPECIES	8	KCNAB3 (ENSG00000170049)	RNF227 (ENSG00000179859)	CHD3 (ENSG00000170004) #7	CYB5D1 (ENSG00000182224) #9	NAA38 (ENSG00000183011) #8	TMEM88 (ENSG00000167874) #10	KDM6B (ENSG00000132510) #11	DNAH2 (ENSG00000183914) #12	EFNB3 (ENSG00000108947) #13	WRAP53 (ENSG00000141499) #14	TP53 (ENSG00000141510) #15	ATP1B2 (ENSG00000129244) #16	SAT2 (ENSG00000141504) #19	SHBG (ENSG00000129214) #18	FXR2 (ENSG00000129245) #20	SOX15 (ENSG00000129194) #22	MPDU1 (ENSG00000129255) #21	CD68 (ENSG00000129226) #23	EIF4A1 (ENSG00000161960) #24	SENP3 (ENSG00000161956) #25	TNFSF13 (ENSG00000161955) #26	TNFSF12-TNFSF13 (ENSG00000248871)	TNFSF12 (ENSG00000239697) #27	POLR2A (ENSG00000181222) #28	SLC35G6 (ENSG00000259224) #29	ZBTB4 (ENSG00000174282) #30	CHRNB1 (ENSG00000170175)	FGF11 (ENSG00000161958) #31	TMEM102 (ENSG00000181284)	SPEM3 (ENSG00000283439)	SPEM2 (ENSG00000184560) #33
Gorilla	MODERN SPECIES	8	KCNAB3 (ENSGGOG00000006442)	RNF227 (ENSGGOG00000042011)	CHD3 (ENSGGOG00000013496) #7	CYB5D1 (ENSGGOG00000015321) #9	NAA38 (ENSGGOG00000015317) #8	TMEM88 (ENSGGOG00000015315) #10	KDM6B (ENSGGOG00000015307) #11	DNAH2 (ENSGGOG00000001454) #12	EFNB3 (ENSGGOG00000005033) #13	WRAP53 (ENSGGOG00000005026) #14	TP53 (ENSGGOG00000009786) #15	ATP1B2 (ENSGGOG00000002715) #16	SHBG (ENSGGOG00000025587) #18	SAT2 (ENSGGOG00000027495) #19	FXR2 (ENSGGOG00000024357) #20	SOX15 (ENSGGOG00000027463) #22	MPDU1 (ENSGGOG00000026489) #21	CD68 (ENSGGOG00000023269) #23	EIF4A1 (ENSGGOG00000024702) #24	SENP3 (ENSGGOG00000011537) #25	TNFSF13 (ENSGGOG00000011530) #26	TNFSF12 (ENSGGOG00000041310) #27	POLR2A (ENSGGOG00000014800) #28	ZBTB4 (ENSGGOG00000016401) #30	CHRNB1 (ENSGGOG00000016388)	FGF11 (ENSGGOG00000011826) #31	TMEM102 (ENSGGOG00000011820)	SPEM3 (ENSGGOG00000037291)	SPEM2 (ENSGGOG00000011816) #33	SPEM1 (ENSGGOG00000011808) #34	NLGN2 (ENSGGOG00000011800) #35
Orangutan	MODERN SPECIES	8	KCNAB3 (ENSPPYG00000007942)	RNF227 (ENSPPYG00000041261)	CHD3 (ENSPPYG00000007940) #7	CYB5D1 (ENSPPYG00000007938) #9	ENSPPYG00000007937 #8	TMEM88 (ENSPPYG00000007936) #10	DNAH2 (ENSPPYG00000007935) #12	EFNB3 (ENSPPYG00000031420) #13	WRAP53 (ENSPPYG00000008860) #14	ENSPPYG00000031962	TP53 (ENSPPYG00000007934) #15	ATP1B2 (ENSPPYG00000007933) #16	SHBG (ENSPPYG00000007932) #18	ENSPPYG00000007931 #19	FXR2 (ENSPPYG00000007930) #20	SOX15 (ENSPPYG00000007929) #22	MPDU1 (ENSPPYG00000007928) #21	CD68 (ENSPPYG00000007927) #23	EIF4A1 (ENSPPYG00000007926) #24	SENP3 (ENSPPYG00000031623) #25	TNFSF13 (ENSPPYG00000007925) #26	ENSPPYG00000030206 #27	POLR2A (ENSPPYG00000007924) #28	ENSPPYG00000007923 #29	ZBTB4 (ENSPPYG00000007922) #30	CHRNB1 (ENSPPYG00000007921)	FGF11 (ENSPPYG00000038705) #31	TMEM102 (ENSPPYG00000007919)	SPEM3 (ENSPPYG00000031603)	SPEM2 (ENSPPYG00000007918) #33	SPEM1 (ENSPPYG00000007917) #34
Cercopithecidae	ANCESTRAL SPECIES	26	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Rhesus	MODERN SPECIES	7	RNF227 (ENSMMUG00000046058)	CHD3 (ENSMMUG00000022221) #7	CYB5D1 (ENSMMUG00000063668) #9	NAA38 (ENSMMUG00000008178) #8	TMEM88 (ENSMMUG00000008176) #10	KDM6B (ENSMMUG00000008173) #11	ENSMMUG00000049849	DNAH2 (ENSMMUG00000008166) #12	EFNB3 (ENSMMUG00000048204) #13	WRAP53 (ENSMMUG00000008637) #14	TP53 (ENSMMUG00000008639) #15	ATP1B2 (ENSMMUG00000044486) #16	SHBG (ENSMMUG00000013513) #18	SAT2 (ENSMMUG00000013511) #19	FXR2 (ENSMMUG00000013510) #20	SOX15 (ENSMMUG00000057228) #22	MPDU1 (ENSMMUG00000013503) #21	CD68 (ENSMMUG00000013501) #23	EIF4A1 (ENSMMUG00000013499) #24	SENP3 (ENSMMUG00000006332) #25	TNFSF12 (ENSMMUG00000006327) #27	ENSMMUG00000060007	POLR2A (ENSMMUG00000023620) #28	ENSMMUG00000023619 #29	ZBTB4 (ENSMMUG00000023616) #30	CHRNB1 (ENSMMUG00000017690)	FGF11 (ENSMMUG00000061498) #31	TMEM102 (ENSMMUG00000009709)	SPEM2 (ENSMMUG00000015623) #33	SPEM1 (ENSMMUG00000015622) #34	NLGN2 (ENSMMUG00000055083) #35
Pig-tailed macaque	MODERN SPECIES	94	KCNAB3 (ENSMNEG00000040660)	RNF227 (ENSMNEG00000045490)	CHD3 (ENSMNEG00000001728) #7	CYB5D1 (ENSMNEG00000034836) #9	NAA38 (ENSMNEG00000031597) #8	TMEM88 (ENSMNEG00000039594) #10	KDM6B (ENSMNEG00000040752) #11	DNAH2 (ENSMNEG00000033625) #12	EFNB3 (ENSMNEG00000029996) #13	WRAP53 (ENSMNEG00000036812) #14	TP53 (ENSMNEG00000038875) #15	ATP1B2 (ENSMNEG00000044869) #16	SHBG (ENSMNEG00000038821) #18	SAT2 (ENSMNEG00000040277) #19	FXR2 (ENSMNEG00000031195) #20	SOX15 (ENSMNEG00000038412) #22	MPDU1 (ENSMNEG00000034487) #21	CD68 (ENSMNEG00000039057) #23	ENSMNEG00000035880 ##24	SENP3 (ENSMNEG00000039750) #25	TNFSF13 (ENSMNEG00000039273) #26	TNFSF12 (ENSMNEG00000045341) #27	POLR2A (ENSMNEG00000040407) #28	ENSMNEG00000034332 #29	ZBTB4 (ENSMNEG00000017704) #30	CHRNB1 (ENSMNEG00000039379)	FGF11 (ENSMNEG00000028210) #31	TMEM102 (ENSMNEG00000039019)	SPEM3 (ENSMNEG00000004173)	SPEM2 (ENSMNEG00000032998) #33	SPEM1 (ENSMNEG00000045294) #34
Cercopithecinae_b	ANCESTRAL SPECIES	26	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Olive baboon	MODERN SPECIES	8	KCNAB3 (ENSPANG00000023939)	ENSPANG00000048944	CHD3 (ENSPANG00000023938) #7	CYB5D1 (ENSPANG00000023937) #9	NAA38 (ENSPANG00000023935) #8	ENSPANG00000023934	KDM6B (ENSPANG00000024053) #11	DNAH2 (ENSPANG00000030477) #12	EFNB3 (ENSPANG00000049483) #13	WRAP53 (ENSPANG00000024062) #14	TP53 (ENSPANG00000024061) #15	ATP1B2 (ENSPANG00000024060) #16	SHBG (ENSPANG00000024059) #18	SAT2 (ENSPANG00000035750) #19	FXR2 (ENSPANG00000024057) #20	SOX15 (ENSPANG00000024056) #22	MPDU1 (ENSPANG00000024055) #21	CD68 (ENSPANG00000024092) #23	EIF4A1 (ENSPANG00000024093) #24	SENP3 (ENSPANG00000024101) #25	TNFSF13 (ENSPANG00000029662) #26	TNFSF12 (ENSPANG00000024100) #27	ENSPANG00000024099 #28	ENSPANG00000003329 #29	ZBTB4 (ENSPANG00000024098) #30	CHRNB1 (ENSPANG00000024097)	FGF11 (ENSPANG00000024096) #31	TMEM102 (ENSPANG00000024095)	SPEM2 (ENSPANG00000024094) #33	SPEM1 (ENSPANG00000024184) #34	NLGN2 (ENSPANG00000024185) #35
Cercopithecinae_d	ANCESTRAL SPECIES	14	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Drill	MODERN SPECIES	1146	KCNAB3 (ENSMLEG00000027562)	ENSMLEG00000028580	CHD3 (ENSMLEG00000032249) #7	NAA38 (ENSMLEG00000037461) #8	CYB5D1 (ENSMLEG00000034639) #9	TMEM88 (ENSMLEG00000001580) #10	KDM6B (ENSMLEG00000038010) #11	DNAH2 (ENSMLEG00000016835) #12	EFNB3 (ENSMLEG00000031368) #13	WRAP53 (ENSMLEG00000017731) #14	TP53 (ENSMLEG00000042592) #15	ATP1B2 (ENSMLEG00000029537) #16	SHBG (ENSMLEG00000029937) #18	SAT2 (ENSMLEG00000038252) #19	FXR2 (ENSMLEG00000034764) #20	SOX15 (ENSMLEG00000042554) #22	MPDU1 (ENSMLEG00000013173) #21	CD68 (ENSMLEG00000042433) #23	EIF4A1 (ENSMLEG00000032647) #24	SENP3 (ENSMLEG00000032812) #25	TNFSF13 (ENSMLEG00000029071) #26	TNFSF12 (ENSMLEG00000036048) #27	POLR2A (ENSMLEG00000030263) #28	ZBTB4 (ENSMLEG00000028905) #30	ENSMLEG00000026925 #29	CHRNB1 (ENSMLEG00000028167)	FGF11 (ENSMLEG00000042561) #31	ENSMLEG00000025032 #32	SPEM3 (ENSMLEG00000026102)	SPEM2 (ENSMLEG00000036637) #33	SPEM1 (ENSMLEG00000009129) #34
Sooty mangabey	MODERN SPECIES	111	RNF227 (ENSCATG00000027881)	CHD3 (ENSCATG00000041717) #7	NAA38 (ENSCATG00000032806) #8	CYB5D1 (ENSCATG00000030804) #9	TMEM88 (ENSCATG00000042149) #10	KDM6B (ENSCATG00000043776) #11	DNAH2 (ENSCATG00000044804) #12	EFNB3 (ENSCATG00000040835) #13	WRAP53 (ENSCATG00000037604) #14	TP53 (ENSCATG00000039093) #15	ATP1B2 (ENSCATG00000034239) #16	SHBG (ENSCATG00000017374) #18	SAT2 (ENSCATG00000000140) #19	FXR2 (ENSCATG00000039859) #20	MPDU1 (ENSCATG00000028120) #21	SOX15 (ENSCATG00000040468) #22	CD68 (ENSCATG00000041736) #23	EIF4A1 (ENSCATG00000041861) #24	SENP3 (ENSCATG00000034990) #25	TNFSF13 (ENSCATG00000043327) #26	TNFSF12 (ENSCATG00000025895) #27	POLR2A (ENSCATG00000013680) #28	ZBTB4 (ENSCATG00000037178) #30	ENSCATG00000035825 #29	CHRNB1 (ENSCATG00000040923)	FGF11 (ENSCATG00000035004) #31	TMEM102 (ENSCATG00000032916)	SPEM3 (ENSCATG00000044138)	SPEM2 (ENSCATG00000028613) #33	SPEM1 (ENSCATG00000043977) #34	NLGN2 (ENSCATG00000044679) #35
Vervet Monkey	MODERN SPECIES	7	TRAPPC1 (ENSCSAG00000011079)	KCNAB3 (ENSCSAG00000011097)	CHD3 (ENSCSAG00000011122) #7	CYB5D1 (ENSCSAG00000011130) #9	NAA38 (ENSCSAG00000011136) #8	TMEM88 (ENSCSAG00000011143) #10	KDM6B (ENSCSAG00000011157) #11	DNAH2 (ENSCSAG00000011272) #12	EFNB3 (ENSCSAG00000011328) #13	WRAP53 (ENSCSAG00000011338) #14	TP53 (ENSCSAG00000011345) #15	ATP1B2 (ENSCSAG00000011352) #16	SHBG (ENSCSAG00000011359) #18	SAT2 (ENSCSAG00000011371) #19	FXR2 (ENSCSAG00000011386) #20	SOX15 (ENSCSAG00000011393) #22	MPDU1 (ENSCSAG00000011425) #21	CD68 (ENSCSAG00000011452) #23	EIF4A1 (ENSCSAG00000011468) #24	SENP3 (ENSCSAG00000011478) #25	TNFSF13 (ENSCSAG00000011511) #26	POLR2A (ENSCSAG00000011644) #28	ENSCSAG00000000566 #29	ZBTB4 (ENSCSAG00000011692) #30	CHRNB1 (ENSCSAG00000011722)	FGF11 (ENSCSAG00000011727) #31	TMEM102 (ENSCSAG00000011729)	SPEM2 (ENSCSAG00000011734) #33	SPEM1 (ENSCSAG00000011740) #34	NLGN2 (ENSCSAG00000011745) #35	TMEM256 (ENSCSAG00000011751) #36
Rhinopithecus	ANCESTRAL SPECIES	6	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Golden snub-nosed monkey	MODERN SPECIES	1023	RNF227 (ENSRROG00000037731)	CHD3 (ENSRROG00000029554) #7	CYB5D1 (ENSRROG00000033738) #9	NAA38 (ENSRROG00000037370) #8	TMEM88 (ENSRROG00000043517) #10	KDM6B (ENSRROG00000030681) #11	ENSRROG00000028496	DNAH2 (ENSRROG00000035849) #12	EFNB3 (ENSRROG00000045493) #13	WRAP53 (ENSRROG00000032629) #14	TP53 (ENSRROG00000037163) #15	ATP1B2 (ENSRROG00000043331) #16	SHBG (ENSRROG00000041036) #18	SAT2 (ENSRROG00000002103) #19	FXR2 (ENSRROG00000035470) #20	SOX15 (ENSRROG00000035518) #22	MPDU1 (ENSRROG00000039715) #21	CD68 (ENSRROG00000036188) #23	EIF4A1 (ENSRROG00000032175) #24	SENP3 (ENSRROG00000036921) #25	TNFSF13 (ENSRROG00000043005) #26	TNFSF12 (ENSRROG00000040782) #27	POLR2A (ENSRROG00000029583) #28	ENSRROG00000039647 #29	ZBTB4 (ENSRROG00000024460) #30	CHRNB1 (ENSRROG00000034762)	FGF11 (ENSRROG00000013032) #31	TMEM102 (ENSRROG00000038922)	SPEM3 (ENSRROG00000025439)	SPEM2 (ENSRROG00000007220) #33	SPEM1 (ENSRROG00000037782) #34
Black snub-nosed monkey	MODERN SPECIES	1512	KCNAB3 (ENSRBIG00000036785)	RNF227 (ENSRBIG00000039918)	CHD3 (ENSRBIG00000033562) #7	CYB5D1 (ENSRBIG00000031810) #9	NAA38 (ENSRBIG00000039054) #8	TMEM88 (ENSRBIG00000041639) #10	KDM6B (ENSRBIG00000032265) #11	DNAH2 (ENSRBIG00000032058) #12	EFNB3 (ENSRBIG00000021710) #13	WRAP53 (ENSRBIG00000035756) #14	TP53 (ENSRBIG00000038164) #15	ATP1B2 (ENSRBIG00000043880) #16	SHBG (ENSRBIG00000034360) #18	SAT2 (ENSRBIG00000028746) #19	FXR2 (ENSRBIG00000034647) #20	SOX15 (ENSRBIG00000025597) #22	MPDU1 (ENSRBIG00000025521) #21	CD68 (ENSRBIG00000040396) #23	EIF4A1 (ENSRBIG00000044495) #24	SENP3 (ENSRBIG00000039122) #25	TNFSF13 (ENSRBIG00000032576) #26	TNFSF12 (ENSRBIG00000043993) #27	POLR2A (ENSRBIG00000002471) #28	ENSRBIG00000017561 #29	ZBTB4 (ENSRBIG00000042670) #30	CHRNB1 (ENSRBIG00000026518)	FGF11 (ENSRBIG00000031378) #31	TMEM102 (ENSRBIG00000027968)	SPEM3 (ENSRBIG00000041166)	SPEM2 (ENSRBIG00000040229) #33	SPEM1 (ENSRBIG00000019816) #34
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a.h.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099.a #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a.h.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099.a #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Marmoset	MODERN SPECIES	17	RNF227 (ENSCJAG00000041018)	CHD3 (ENSCJAG00000014766) #7	CYB5D1 (ENSCJAG00000014841) #9	NAA38 (ENSCJAG00000014843) #8	TMEM88 (ENSCJAG00000083328) #10	KDM6B (ENSCJAG00000014850) #11	ENSCJAG00000084720	DNAH2 (ENSCJAG00000014881) #12	EFNB3 (ENSCJAG00000044444) #13	WRAP53 (ENSCJAG00000014965) #14	TP53 (ENSCJAG00000014978) #15	ATP1B2 (ENSCJAG00000015019) #16	SHBG (ENSCJAG00000015035) #18	SAT2 (ENSCJAG00000015055) #19	FXR2 (ENSCJAG00000015063) #20	SOX15 (ENSCJAG00000007951) #22	MPDU1 (ENSCJAG00000015095) #21	CD68 (ENSCJAG00000048079) #23	EIF4A1 (ENSCJAG00000015114) #24	SENP3 (ENSCJAG00000015137) #25	TNFSF13 (ENSCJAG00000032369) #26	TNFSF12 (ENSCJAG00000039733) #27	POLR2A (ENSCJAG00000015157) #28	ENSCJAG00000000757 #29	ZBTB4 (ENSCJAG00000000751) #30	CHRNB1 (ENSCJAG00000000743)	FGF11 (ENSCJAG00000016342) #31	TMEM102 (ENSCJAG00000016369)	SPEM3 (ENSCJAG00000042010)	SPEM2 (ENSCJAG00000016391) #33	SPEM1 (ENSCJAG00000016399) #34
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a.h.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099.a #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Capuchin	MODERN SPECIES	72	KCNAB3 (ENSCCAG00000026835)	CHD3 (ENSCCAG00000034792) #7	RNF227 (ENSCCAG00000036242)	CYB5D1 (ENSCCAG00000017780) #9	NAA38 (ENSCCAG00000021358) #8	KDM6B (ENSCCAG00000037137) #11	ENSCCAG00000013286	DNAH2 (ENSCCAG00000024867) #12	EFNB3 (ENSCCAG00000027538) #13	WRAP53 (ENSCCAG00000033471) #14	TP53 (ENSCCAG00000032786) #15	ATP1B2 (ENSCCAG00000026533) #16	SHBG (ENSCCAG00000036241) #18	SAT2 (ENSCCAG00000020389) #19	FXR2 (ENSCCAG00000013516) #20	SOX15 (ENSCCAG00000026871) #22	MPDU1 (ENSCCAG00000034105) #21	CD68 (ENSCCAG00000028205) #23	ENSCCAG00000029117 ##24	SENP3 (ENSCCAG00000031620) #25	TNFSF12 (ENSCCAG00000025229) #27	ENSCCAG00000026843	POLR2A (ENSCCAG00000020938) #28	ENSCCAG00000021794 #29	ZBTB4 (ENSCCAG00000022298) #30	CHRNB1 (ENSCCAG00000033847)	FGF11 (ENSCCAG00000034892) #31	TMEM102 (ENSCCAG00000021991)	SPEM3 (ENSCCAG00000024983)	SPEM2 (ENSCCAG00000029641) #33	SPEM1 (ENSCCAG00000027323) #34
Bolivian squirrel monkey	MODERN SPECIES	74	TRAPPC1 (ENSSBOG00000032902)	KCNAB3 (ENSSBOG00000024892)	CHD3 (ENSSBOG00000020719) #7	CYB5D1 (ENSSBOG00000028583) #9	NAA38 (ENSSBOG00000035591) #8	TMEM88 (ENSSBOG00000035546) #10	KDM6B (ENSSBOG00000031259) #11	DNAH2 (ENSSBOG00000010082) #12	EFNB3 (ENSSBOG00000028321) #13	WRAP53 (ENSSBOG00000023171) #14	TP53 (ENSSBOG00000020983) #15	ATP1B2 (ENSSBOG00000024391) #16	SHBG (ENSSBOG00000024727) #18	SAT2 (ENSSBOG00000022741) #19	FXR2 (ENSSBOG00000031395) #20	SOX15 (ENSSBOG00000031727) #22	MPDU1 (ENSSBOG00000034039) #21	CD68 (ENSSBOG00000032218) #23	EIF4A1 (ENSSBOG00000023267) #24	SENP3 (ENSSBOG00000021388) #25	TNFSF13 (ENSSBOG00000032125) #26	TNFSF12 (ENSSBOG00000026171) #27	POLR2A (ENSSBOG00000000808) #28	ENSSBOG00000018582 #29	ZBTB4 (ENSSBOG00000025456) #30	CHRNB1 (ENSSBOG00000031299)	FGF11 (ENSSBOG00000029299) #31	TMEM102 (ENSSBOG00000019715)	SPEM3 (ENSSBOG00000035363)	SPEM2 (ENSSBOG00000035215) #33	SPEM1 (ENSSBOG00000030260) #34
Mas night monkey	MODERN SPECIES	807	KCNAB3 (ENSANAG00000032405)	RNF227 (ENSANAG00000024198)	CHD3 (ENSANAG00000034323) #7	CYB5D1 (ENSANAG00000037580) #9	TMEM88 (ENSANAG00000034510) #10	NAA38 (ENSANAG00000027273) #8	KDM6B (ENSANAG00000021278) #11	DNAH2 (ENSANAG00000022783) #12	EFNB3 (ENSANAG00000030573) #13	WRAP53 (ENSANAG00000026764) #14	ENSANAG00000027861 #15	ATP1B2 (ENSANAG00000021385) #16	SHBG (ENSANAG00000037137) #18	SAT2 (ENSANAG00000035086) #19	FXR2 (ENSANAG00000023710) #20	SOX15 (ENSANAG00000038364) #22	MPDU1 (ENSANAG00000026260) #21	CD68 (ENSANAG00000037344) #23	EIF4A1 (ENSANAG00000035392) #24	SENP3 (ENSANAG00000024203) #25	TNFSF13 (ENSANAG00000037476) #26	TNFSF12 (ENSANAG00000019845) #27	POLR2A (ENSANAG00000020093) #28	ENSANAG00000019773 #29	ZBTB4 (ENSANAG00000030619) #30	ENSANAG00000020109	FGF11 (ENSANAG00000027406) #31	TMEM102 (ENSANAG00000033250)	SPEM3 (ENSANAG00000030842)	SPEM2 (ENSANAG00000028796) #33	SPEM1 (ENSANAG00000019788) #34
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000162099.b #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000162099.b #22
Marmoset	MODERN SPECIES	16	SAMD5 (ENSCJAG00000019536)	SASH1 (ENSCJAG00000019537)	UST (ENSCJAG00000019562)	TAB2 (ENSCJAG00000019580)	ZC3H12D (ENSCJAG00000019606)	PPIL4 (ENSCJAG00000019613)	ENSCJAG00000071605	GINM1 (ENSCJAG00000019634)	ENSCJAG00000070682	KATNA1 (ENSCJAG00000019640)	ENSCJAG00000078434	LATS1 (ENSCJAG00000009197)	NUP43 (ENSCJAG00000009221)	ENSCJAG00000009230	LRP11 (ENSCJAG00000009284)	ENSCJAG00000060913 #22	ENSCJAG00000021540	ENSCJAG00000077951	ENSCJAG00000013469	ENSCJAG00000084847	ENSCJAG00000077421	IYD (ENSCJAG00000013438)	PLEKHG1 (ENSCJAG00000013414)	MTHFD1L (ENSCJAG00000013404)	AKAP12 (ENSCJAG00000013402)	ZBTB2 (ENSCJAG00000057010)	RMND1 (ENSCJAG00000013350)	ARMT1 (ENSCJAG00000013343)	CCDC170 (ENSCJAG00000013339)	ESR1 (ENSCJAG00000013293)	SYNE1 (ENSCJAG00000012842)
Tarsier	MODERN SPECIES	5154	KCNAB3 (ENSTSYG00000037194)	RNF227 (ENSTSYG00000008705)	CHD3 (ENSTSYG00000035658) #7	CYB5D1 (ENSTSYG00000036979) #9	NAA38 (ENSTSYG00000033326) #8	TMEM88 (ENSTSYG00000025417) #10	KDM6B (ENSTSYG00000028891) #11	DNAH2 (ENSTSYG00000000958) #12	EFNB3 (ENSTSYG00000026018) #13	WRAP53 (ENSTSYG00000009279) #14	TP53 (ENSTSYG00000034279) #15	ATP1B2 (ENSTSYG00000028614) #16	SHBG (ENSTSYG00000014562) #18	SAT2 (ENSTSYG00000013209) #19	FXR2 (ENSTSYG00000004564) #20	SOX15 (ENSTSYG00000032210) #22	MPDU1 (ENSTSYG00000025837) #21	CD68 (ENSTSYG00000004561)	EIF4A1 (ENSTSYG00000004557) #24	SENP3 (ENSTSYG00000004551) #25	TNFSF13 (ENSTSYG00000027491) #26	TNFSF12 (ENSTSYG00000033003) #27	POLR2A (ENSTSYG00000012803) #28	SLC35G6 (ENSTSYG00000031039) #29	ZBTB4 (ENSTSYG00000034934) #30	CHRNB1 (ENSTSYG00000027900)	FGF11 (ENSTSYG00000033119) #31	TMEM102 (ENSTSYG00000026877)	SPEM3 (ENSTSYG00000027813)	CUNH17orf74 (ENSTSYG00000037404) #33	SPEM1 (ENSTSYG00000010866) #34
Strepsirrhini	ANCESTRAL SPECIES	21	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517
Lemuriformes	ANCESTRAL SPECIES	33	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517
Mouse lemur	MODERN SPECIES	7	RNF227 (ENSMICG00000030993)	CHD3 (ENSMICG00000008741) #7	NAA38 (ENSMICG00000015147) #8	CYB5D1 (ENSMICG00000015154) #9	TMEM88 (ENSMICG00000038093) #10	KDM6B (ENSMICG00000015117) #11	DNAH2 (ENSMICG00000014873) #12	EFNB3 (ENSMICG00000034462) #13	WRAP53 (ENSMICG00000014862) #14	TP53 (ENSMICG00000014853) #15	ATP1B2 (ENSMICG00000036264) #16	SHBG (ENSMICG00000014832) #18	SAT2 (ENSMICG00000014822) #19	FXR2 (ENSMICG00000014799) #20	MPDU1 (ENSMICG00000014782) #21	SOX15 (ENSMICG00000042795) #22	ENSMICG00000014773	EIF4A1 (ENSMICG00000014759) #24	ENSMICG00000014738 #25	TNFSF13 (ENSMICG00000014718) #26	TNFSF12 (ENSMICG00000041583) #27	POLR2A (ENSMICG00000013372) #28	ENSMICG00000037032 #29	ZBTB4 (ENSMICG00000042619) #30	CHRNB1 (ENSMICG00000013349)	FGF11 (ENSMICG00000031532) #31	TMEM102 (ENSMICG00000038598)	SPEM3 (ENSMICG00000042623)	SPEM2 (ENSMICG00000028897) #33	SPEM1 (ENSMICG00000012137) #34	NLGN2 (ENSMICG00000027843) #35
Lemuriformes_a	ANCESTRAL SPECIES	45	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517
Coquerels sifaka	MODERN SPECIES	637	CHD3 (ENSPCOG00000020952) #7	NAA38 (ENSPCOG00000020844) #8	CYB5D1 (ENSPCOG00000026448) #9	TMEM88 (ENSPCOG00000019225) #10	KDM6B (ENSPCOG00000024321) #11	DNAH2 (ENSPCOG00000020639) #12	ENSPCOG00000024965	EFNB3 (ENSPCOG00000019954) #13	WRAP53 (ENSPCOG00000027329) #14	TP53 (ENSPCOG00000028656) #15	ATP1B2 (ENSPCOG00000028840) #16	SHBG (ENSPCOG00000024453) #18	SAT2 (ENSPCOG00000020366) #19	FXR2 (ENSPCOG00000024603) #20	MPDU1 (ENSPCOG00000025499) #21	SOX15 (ENSPCOG00000015435) #22	CD68 (ENSPCOG00000003117) #23	EIF4A1 (ENSPCOG00000012349) #24	SENP3 (ENSPCOG00000025746) #25	TNFSF13 (ENSPCOG00000011492) #26	TNFSF12 (ENSPCOG00000021272) #27	POLR2A (ENSPCOG00000025260) #28	ENSPCOG00000020477 #29	ZBTB4 (ENSPCOG00000027355) #30	CHRNB1 (ENSPCOG00000017211)	FGF11 (ENSPCOG00000021596) #31	TMEM102 (ENSPCOG00000025065)	SPEM3 (ENSPCOG00000027458)	SPEM2 (ENSPCOG00000020475) #33	SPEM1 (ENSPCOG00000005919) #34	NLGN2 (ENSPCOG00000026978) #35
Greater bamboo lemur	MODERN SPECIES	365	CHD3 (ENSPSMG00000018318) #7	CYB5D1 (ENSPSMG00000018348) #9	NAA38 (ENSPSMG00000018356) #8	TMEM88 (ENSPSMG00000018362) #10	KDM6B (ENSPSMG00000018389) #11	DNAH2 (ENSPSMG00000018427) #12	ENSPSMG00000018444	EFNB3 (ENSPSMG00000018480) #13	WRAP53 (ENSPSMG00000018546) #14	TP53 (ENSPSMG00000018689) #15	ATP1B2 (ENSPSMG00000018859) #16	SHBG (ENSPSMG00000018923) #18	SAT2 (ENSPSMG00000018971) #19	FXR2 (ENSPSMG00000018995) #20	MPDU1 (ENSPSMG00000019052) #21	SOX15 (ENSPSMG00000019093) #22	CD68 (ENSPSMG00000019122) #23	EIF4A1 (ENSPSMG00000019175) #24	SENP3 (ENSPSMG00000019323) #25	TNFSF13 (ENSPSMG00000019343) #26	TNFSF12 (ENSPSMG00000019367) #27	ENSPSMG00000019387	ENSPSMG00000019393 #28	ENSPSMG00000019398 #29	ZBTB4 (ENSPSMG00000019404) #30	CHRNB1 (ENSPSMG00000019419)	FGF11 (ENSPSMG00000019425) #31	ENSPSMG00000019430	TMEM102 (ENSPSMG00000019436)	SPEM2 (ENSPSMG00000019442) #33	NLGN2 (ENSPSMG00000019454) #35
Bushbaby	MODERN SPECIES	161	KCNAB3 (ENSOGAG00000008025)	ENSOGAG00000003219	CHD3 (ENSOGAG00000003216) #7	CYB5D1 (ENSOGAG00000027927) #9	NAA38 (ENSOGAG00000030727) #8	TMEM88 (ENSOGAG00000029549) #10	KDM6B (ENSOGAG00000003207) #11	DNAH2 (ENSOGAG00000002181) #12	EFNB3 (ENSOGAG00000001453) #13	WRAP53 (ENSOGAG00000001916) #14	TP53 (ENSOGAG00000016871) #15	ATP1B2 (ENSOGAG00000009564) #16	SHBG (ENSOGAG00000029184) #18	SAT2 (ENSOGAG00000016867) #19	FXR2 (ENSOGAG00000008146) #20	SOX15 (ENSOGAG00000008145) #22	MPDU1 (ENSOGAG00000008141) #21	CD68 (ENSOGAG00000008138) #23	EIF4A1 (ENSOGAG00000008132) #24	SENP3 (ENSOGAG00000008129) #25	ENSOGAG00000008121 #26	POLR2A (ENSOGAG00000033608) #28	ENSOGAG00000033200 #29	ZBTB4 (ENSOGAG00000034491) #30	CHRNB1 (ENSOGAG00000002370)	FGF11 (ENSOGAG00000012750) #31	TMEM102 (ENSOGAG00000031432)	SPEM2 (ENSOGAG00000034681) #33	SPEM1 (ENSOGAG00000011428) #34	NLGN2 (ENSOGAG00000011427) #35	TMEM256 (ENSOGAG00000011378) #36
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Tree shrew	MODERN SPECIES	8416																SOX15 (ENSTBEG00000009566) #22	MPDU1 (ENSTBEG00000009441) #21
Glires	ANCESTRAL SPECIES	3	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00940000153249.b.c #29	ENSGT00930000151033 #28	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34	ENSGT00940000160598 #35
Rabbit	MODERN SPECIES	10	RNF227 (ENSOCUG00000017320)	CHD3 (ENSOCUG00000029299) #7	CYB5D1 (ENSOCUG00000017288) #9	NAA38 (ENSOCUG00000017284) #8	TMEM88 (ENSOCUG00000017280) #10	KDM6B (ENSOCUG00000017292) #11	DNAH2 (ENSOCUG00000012688) #12	EFNB3 (ENSOCUG00000002822) #13	WRAP53 (ENSOCUG00000025261) #14	TP53 (ENSOCUG00000001138) #15	ATP1B2 (ENSOCUG00000002988) #16	SHBG (ENSOCUG00000002566) #18	ENSOCUG00000002563 #19	FXR2 (ENSOCUG00000010393) #20	MPDU1 (ENSOCUG00000010389) #21	SOX15 (ENSOCUG00000001100) #22	CD68 (ENSOCUG00000010383) #23	EIF4A1 (ENSOCUG00000010375) #24	SENP3 (ENSOCUG00000017785) #25	TNFSF13 (ENSOCUG00000028216) #26	TNFSF12 (ENSOCUG00000037107) #27	ENSOCUG00000028180 #29	ZBTB4 (ENSOCUG00000007437) #30	CHRNB1 (ENSOCUG00000007433)	FGF11 (ENSOCUG00000004215) #31	TMEM102 (ENSOCUG00000004211)	SPEM2 (ENSOCUG00000005547) #33	SPEM1 (ENSOCUG00000005542) #34	NLGN2 (ENSOCUG00000005539) #35	ENSOCUG00000005534 #36	PLSCR3 (ENSOCUG00000000983) #37
Pika	MODERN SPECIES	6372															FXR2 (ENSOPRG00000017108) #20	SOX15 (ENSOPRG00000017106) #22	ENSOPRG00000017101 #21
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Muroidea	ANCESTRAL SPECIES		ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.a.a #24	ENSGT00940000164775	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.a.a #24	ENSGT00940000164775	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a
Prairie vole	MODERN SPECIES	15	Rnf227 (ENSMOCG00000013838)	Chd3 (ENSMOCG00000004848) #7	ENSMOCG00000020842	Cyb5d1 (ENSMOCG00000016201) #9	Naa38 (ENSMOCG00000002129) #8	Tmem88 (ENSMOCG00000001201) #10	Kdm6b (ENSMOCG00000009811) #11	Dnah2 (ENSMOCG00000003037) #12	Efnb3 (ENSMOCG00000006928) #13	Wrap53 (ENSMOCG00000015971) #14	Trp53 (ENSMOCG00000020008) #15	Atp1b2 (ENSMOCG00000009972) #16	Shbg (ENSMOCG00000013734) #18	Sat2 (ENSMOCG00000020053) #19	Fxr2 (ENSMOCG00000019049) #20	Sox15 (ENSMOCG00000001244) #22	ENSMOCG00000019979 #21	Cd68 (ENSMOCG00000011137)	Eif4a1 (ENSMOCG00000007064) #24	Senp3 (ENSMOCG00000017728) #25	ENSMOCG00000022801 #26	Polr2a (ENSMOCG00000018279) #28	Slc35g3 (ENSMOCG00000010288) #29	ENSMOCG00000019073 #30	Chrnb1 (ENSMOCG00000022627)	Fgf11 (ENSMOCG00000021518) #31	ENSMOCG00000016882	Tmem102 (ENSMOCG00000016206)	Spem3 (ENSMOCG00000022965)	Spem2 (ENSMOCG00000017128) #33	Spem1 (ENSMOCG00000006619) #34
Northern American deer mouse	MODERN SPECIES	21	Kcnab3 (ENSPEMG00000012211)	ENSPEMG00000029356	Chd3 (ENSPEMG00000014262) #7	Cyb5d1 (ENSPEMG00000027957) #9	Naa38 (ENSPEMG00000015014) #8	Tmem88 (ENSPEMG00000025255) #10	Kdm6b (ENSPEMG00000010257) #11	Dnah2 (ENSPEMG00000004906) #12	Efnb3 (ENSPEMG00000029907) #13	Wrap53 (ENSPEMG00000009467) #14	ENSPEMG00000011289 #15	Atp1b2 (ENSPEMG00000009297) #16	Shbg (ENSPEMG00000008069) #18	Sat2 (ENSPEMG00000019261) #19	Fxr2 (ENSPEMG00000019239) #20	Sox15 (ENSPEMG00000019249) #22	Mpdu1 (ENSPEMG00000019060) #21	ENSPEMG00000012269 #23	Eif4a1 (ENSPEMG00000009100) #24	Senp3 (ENSPEMG00000019189) #25	Tnfsf13 (ENSPEMG00000019217) #26	Tnfsf12 (ENSPEMG00000024526) #27	Polr2a (ENSPEMG00000012521) #28	Slc35g3 (ENSPEMG00000012096) #29	Zbtb4 (ENSPEMG00000030856) #30	Chrnb1 (ENSPEMG00000016983)	Fgf11 (ENSPEMG00000026103) #31	Tmem102 (ENSPEMG00000018682)	ENSPEMG00000027133	Spem2 (ENSPEMG00000001259) #33	Spem1 (ENSPEMG00000010523) #34
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.b.b ##24	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608	ENSGT00940000164517
Chinese hamster chok1gshd	MODERN SPECIES	229	Rnf227 (ENSCGRG00001005462)	Chd3 (ENSCGRG00001011306) #7	ENSCGRG00001023929	Cyb5d1 (ENSCGRG00001015505) #9	Naa38 (ENSCGRG00001016403) #8	Tmem88 (ENSCGRG00001018524) #10	Kdm6b (ENSCGRG00001023895) #11	Dnah2 (ENSCGRG00001023725) #12	Efnb3 (ENSCGRG00001004575) #13	Wrap53 (ENSCGRG00001009844) #14	Trp53 (ENSCGRG00001012952) #15	Atp1b2 (ENSCGRG00001016825) #16	Shbg (ENSCGRG00001024732) #18	Sat2 (ENSCGRG00001024470) #19	Fxr2 (ENSCGRG00001000488) #20	Sox15 (ENSCGRG00001006850) #22	Lec35 (ENSCGRG00001008612) #21	ENSCGRG00001006775 #23	Eif4a1 (ENSCGRG00001009326) #24	Senp3 (ENSCGRG00001001055) #25	Tnfsf13 (ENSCGRG00001000520) #26	Tnfsf12 (ENSCGRG00001001875) #27	Polr2a (ENSCGRG00001003538) #28	Slc35g3 (ENSCGRG00001010297) #29	Zbtb4 (ENSCGRG00001020458) #30	Chrnb1 (ENSCGRG00001021737)	Fgf11 (ENSCGRG00001016734) #31	Tmem102 (ENSCGRG00001018840)	ENSCGRG00001022749	Spem3 (ENSCGRG00001023786)	Spem2 (ENSCGRG00001024800) #33
Murinae	ANCESTRAL SPECIES	7	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b.b #24	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.a.a #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608
Mus	ANCESTRAL SPECIES	2	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Mouse	MODERN SPECIES	2	Kcnab3 (ENSMUSG00000018470)	Rnf227 (ENSMUSG00000043419)	Chd3 (ENSMUSG00000018474) #7	Cyb5d1 (ENSMUSG00000044795) #9	Naa38 (ENSMUSG00000059278) #8	Tmem88 (ENSMUSG00000045377) #10	Kdm6b (ENSMUSG00000018476) #11	Dnah2 (ENSMUSG00000005237) #12	Efnb3 (ENSMUSG00000003934) #13	Wrap53 (ENSMUSG00000041346) #14	Trp53 (ENSMUSG00000059552) #15	Atp1b2 (ENSMUSG00000041329) #16	Shbg (ENSMUSG00000005202) #18	Sat2 (ENSMUSG00000069835) #19	Fxr2 (ENSMUSG00000018765) #20	Sox15 (ENSMUSG00000041287) #22	Mpdu1 (ENSMUSG00000018761) #21	Cd68 (ENSMUSG00000018774)	Eif4a1 (ENSMUSG00000059796) #24	Senp3 (ENSMUSG00000005204) #25	Tnfsfm13 (ENSMUSG00000018752)	Tnfsf13 (ENSMUSG00000089669) #26	Tnfsf12 (ENSMUSG00000097328) #27	Polr2a (ENSMUSG00000005198) #28	Slc35g3 (ENSMUSG00000018776) #29	Zbtb4 (ENSMUSG00000018750) #30	Chrnb1 (ENSMUSG00000041189)	Fgf11 (ENSMUSG00000042826) #31	Tmem102 (ENSMUSG00000089876)	Spem3 (ENSMUSG00000109737)	Spem2 (ENSMUSG00000044084) #33
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00860000136019	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b.a.a #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
spretus	MODERN SPECIES	2	Chd3 (MGP_SPRETEiJ_G0017400) #7	MGP_SPRETEiJ_G0017401	MGP_SPRETEiJ_G0017402 #9	MGP_SPRETEiJ_G0017403 #9	Naa38 (MGP_SPRETEiJ_G0017404) #8	Tmem88 (MGP_SPRETEiJ_G0017405) #10	Kdm6b (MGP_SPRETEiJ_G0017406) #11	Dnah2 (MGP_SPRETEiJ_G0017407) #12	Efnb3 (MGP_SPRETEiJ_G0017408) #13	Wrap53 (MGP_SPRETEiJ_G0017409) #14	Trp53 (MGP_SPRETEiJ_G0017410) #15	Atp1b2 (MGP_SPRETEiJ_G0017411) #16	Shbg (MGP_SPRETEiJ_G0017412) #18	Sat2 (MGP_SPRETEiJ_G0017413) #19	Fxr2 (MGP_SPRETEiJ_G0017414) #20	Sox15 (MGP_SPRETEiJ_G0017415) #22	Mpdu1 (MGP_SPRETEiJ_G0017416) #21	Cd68 (MGP_SPRETEiJ_G0017417)	MGP_SPRETEiJ_G0017418	Senp3 (MGP_SPRETEiJ_G0017419) #25	MGP_SPRETEiJ_G0017420 #26	Tnfsf13 (MGP_SPRETEiJ_G0017421) #26	Tnfsf12 (MGP_SPRETEiJ_G0017422) #27	Polr2a (MGP_SPRETEiJ_G0017423) #28	Slc35g3 (MGP_SPRETEiJ_G0017424) #29	Zbtb4 (MGP_SPRETEiJ_G0017425) #30	Chrnb1 (MGP_SPRETEiJ_G0017426)	Fgf11 (MGP_SPRETEiJ_G0017427) #31	Tmem102 (MGP_SPRETEiJ_G0017428)	Spem2 (MGP_SPRETEiJ_G0017429) #33	Spem1 (MGP_SPRETEiJ_G0017430) #34
Steppe mouse	MODERN SPECIES	2607	Kcnab3 (ENSMSIG00000026433)	Rnf227 (ENSMSIG00000026421)	Chd3 (ENSMSIG00000026278) #7	Cyb5d1 (ENSMSIG00000026258) #9	Naa38 (ENSMSIG00000026252) #8	Tmem88 (ENSMSIG00000026250) #10	Kdm6b (ENSMSIG00000026234) #11	Dnah2 (ENSMSIG00000026044) #12	Efnb3 (ENSMSIG00000026027) #13	Wrap53 (ENSMSIG00000026006) #14	ENSMSIG00000025886 #15	Atp1b2 (ENSMSIG00000025884) #16	Shbg (ENSMSIG00000025876) #18	ENSMSIG00000025872 #19	Fxr2 (ENSMSIG00000025838) #20	Sox15 (ENSMSIG00000025831) #22	Mpdu1 (ENSMSIG00000025820) #21	Cd68 (ENSMSIG00000025801)	ENSMSIG00000025748 #24	Senp3 (ENSMSIG00000025720) #25	ENSMSIG00000025651 #26	Polr2a (ENSMSIG00000025463) #28	Slc35g3 (ENSMSIG00000025457) #29	Zbtb4 (ENSMSIG00000025449) #30	Chrnb1 (ENSMSIG00000025437)	Fgf11 (ENSMSIG00000025425) #31	Tmem102 (ENSMSIG00000025413)	Spem3 (ENSMSIG00000025405)	Spem2 (ENSMSIG00000025397) #33	Spem1 (ENSMSIG00000025386) #34	Nlgn2 (ENSMSIG00000025351) #35
Ryukyu mouse	MODERN SPECIES	2	Chd3 (MGP_CAROLIEiJ_G0016564) #7	MGP_CAROLIEiJ_G0016565	MGP_CAROLIEiJ_G0016566 #9	MGP_CAROLIEiJ_G0016567 #9	Naa38 (MGP_CAROLIEiJ_G0016568) #8	Tmem88 (MGP_CAROLIEiJ_G0016569) #10	Kdm6b (MGP_CAROLIEiJ_G0016570) #11	Dnah2 (MGP_CAROLIEiJ_G0016571) #12	Efnb3 (MGP_CAROLIEiJ_G0016572) #13	Wrap53 (MGP_CAROLIEiJ_G0016573) #14	Trp53 (MGP_CAROLIEiJ_G0016574) #15	Atp1b2 (MGP_CAROLIEiJ_G0016575) #16	Shbg (MGP_CAROLIEiJ_G0016576) #18	Sat2 (MGP_CAROLIEiJ_G0016577) #19	Fxr2 (MGP_CAROLIEiJ_G0016578) #20	Sox15 (MGP_CAROLIEiJ_G0016579) #22	Mpdu1 (MGP_CAROLIEiJ_G0016580) #21	Cd68 (MGP_CAROLIEiJ_G0016581)	MGP_CAROLIEiJ_G0016582	Senp3 (MGP_CAROLIEiJ_G0016583) #25	MGP_CAROLIEiJ_G0016584 #26	Tnfsf13 (MGP_CAROLIEiJ_G0016585) #26	Tnfsf12 (MGP_CAROLIEiJ_G0016586) #27	Polr2a (MGP_CAROLIEiJ_G0016587) #28	Slc35g3 (MGP_CAROLIEiJ_G0016588) #29	Zbtb4 (MGP_CAROLIEiJ_G0016589) #30	Chrnb1 (MGP_CAROLIEiJ_G0016590)	Fgf11 (MGP_CAROLIEiJ_G0016591) #31	Tmem102 (MGP_CAROLIEiJ_G0016592)	Spem2 (MGP_CAROLIEiJ_G0016593) #33	Spem1 (MGP_CAROLIEiJ_G0016594) #34
Shrew mouse	MODERN SPECIES	5	Chd3 (MGP_PahariEiJ_G0017695) #7	MGP_PahariEiJ_G0017696	MGP_PahariEiJ_G0017697 #9	MGP_PahariEiJ_G0017698 #9	Naa38 (MGP_PahariEiJ_G0017699) #8	Tmem88 (MGP_PahariEiJ_G0017700) #10	Kdm6b (MGP_PahariEiJ_G0017701) #11	Dnah2 (MGP_PahariEiJ_G0017702) #12	Efnb3 (MGP_PahariEiJ_G0017703) #13	Wrap53 (MGP_PahariEiJ_G0017704) #14	Trp53 (MGP_PahariEiJ_G0017705) #15	Atp1b2 (MGP_PahariEiJ_G0017706) #16	MGP_PahariEiJ_G0017707 #18	Sat2 (MGP_PahariEiJ_G0017708) #19	Fxr2 (MGP_PahariEiJ_G0017709) #20	Sox15 (MGP_PahariEiJ_G0017710) #22	Mpdu1 (MGP_PahariEiJ_G0017711) #21	Cd68 (MGP_PahariEiJ_G0017712)	MGP_PahariEiJ_G0017713 ##24	Senp3 (MGP_PahariEiJ_G0017714) #25	MGP_PahariEiJ_G0017715 #26	Tnfsf13 (MGP_PahariEiJ_G0017716) #26	Tnfsf12 (MGP_PahariEiJ_G0017717) #27	Polr2a (MGP_PahariEiJ_G0017718) #28	Slc35g3 (MGP_PahariEiJ_G0017719) #29	Zbtb4 (MGP_PahariEiJ_G0017720) #30	Chrnb1 (MGP_PahariEiJ_G0017721)	Fgf11 (MGP_PahariEiJ_G0017722) #31	Tmem102 (MGP_PahariEiJ_G0017723)	Spem2 (MGP_PahariEiJ_G0017724) #33	Spem1 (MGP_PahariEiJ_G0017725) #34
Rat	MODERN SPECIES	1	Kcnab3 (ENSRNOG00000008480)	Rnf227 (ENSRNOG00000021540)	Chd3 (ENSRNOG00000009722) #7	Cyb5d1 (ENSRNOG00000066275) #9	Naa38 (ENSRNOG00000009823) #8	Tmem88 (ENSRNOG00000009870) #10	Kdm6b (ENSRNOG00000037613) #11	Dnah2 (ENSRNOG00000052688) #12	Efnb3 (ENSRNOG00000010320) #13	Wrap53 (ENSRNOG00000010520) #14	Tp53 (ENSRNOG00000010756) #15	Atp1b2 (ENSRNOG00000011227) #16	Shbg (ENSRNOG00000011357) #18	Sat2 (ENSRNOG00000011714) #19	Fxr2 (ENSRNOG00000011876) #20	Sox15 (ENSRNOG00000012155) #22	Mpdu1 (ENSRNOG00000012162) #21	Cd68 (ENSRNOG00000037563) #23	Eif4a1 (ENSRNOG00000030628) #24	Senp3 (ENSRNOG00000013746) #25	Tnfsf13 (ENSRNOG00000014171) #26	Tnfsf12 (ENSRNOG00000045670) #27	Polr2a (ENSRNOG00000028834) #28	Slc35g3 (ENSRNOG00000014519) #29	Zbtb4 (ENSRNOG00000014689) #30	Chrnb1 (ENSRNOG00000014698)	Fgf11 (ENSRNOG00000014882) #31	Tmem102 (ENSRNOG00000015057)	ENSRNOG00000064962	Spem3 (ENSRNOG00000069891)	Spem2 (ENSRNOG00000058939) #33
Upper Galilee mountains blind mole rat	MODERN SPECIES	1746	Kcnab3 (ENSNGAG00000020938)	Rnf227 (ENSNGAG00000021827)	Chd3 (ENSNGAG00000000773) #7	ENSNGAG00000012476	Cyb5d1 (ENSNGAG00000017998) #9	Naa38 (ENSNGAG00000019042) #8	Tmem88 (ENSNGAG00000019276) #10	Kdm6b (ENSNGAG00000002609) #11	Dnah2 (ENSNGAG00000015592) #12	Efnb3 (ENSNGAG00000000608) #13	Wrap53 (ENSNGAG00000001849) #14	Tp53 (ENSNGAG00000010608) #15	Atp1b2 (ENSNGAG00000011555) #16	Sat2 (ENSNGAG00000014713) #19	Fxr2 (ENSNGAG00000016236) #20	Sox15 (ENSNGAG00000001407) #22	Mpdu1 (ENSNGAG00000002289) #21	ENSNGAG00000017735 #23	Eif4a1 (ENSNGAG00000018330) #24	Senp3 (ENSNGAG00000019462) #25	ENSNGAG00000021296 #26	Polr2a (ENSNGAG00000002543) #28	Slc35g3 (ENSNGAG00000015839) #29	Zbtb4 (ENSNGAG00000016971) #30	Chrnb1 (ENSNGAG00000018008)	Fgf11 (ENSNGAG00000018287) #31	Tmem102 (ENSNGAG00000018630)	Spem3 (ENSNGAG00000019102)	Spem2 (ENSNGAG00000020043) #33	Spem1 (ENSNGAG00000005715) #34	Nlgn2 (ENSNGAG00000009216) #35
Lesser Egyptian jerboa	MODERN SPECIES	168	Trappc1 (ENSJJAG00000000666)	Kcnab3 (ENSJJAG00000007965)	Chd3 (ENSJJAG00000017633) #7	Cyb5d1 (ENSJJAG00000012580) #9	Naa38 (ENSJJAG00000013236) #8	Tmem88 (ENSJJAG00000013316) #10	ENSJJAG00000014228 #11	Dnah2 (ENSJJAG00000019886) #12	Efnb3 (ENSJJAG00000011348) #13	Wrap53 (ENSJJAG00000011669) #14	Trp53 (ENSJJAG00000012331) #15	Atp1b2 (ENSJJAG00000013283) #16	Shbg (ENSJJAG00000014834) #18	Sat2 (ENSJJAG00000015219) #19	Fxr2 (ENSJJAG00000016434) #20	Sox15 (ENSJJAG00000016980) #22	Mpdu1 (ENSJJAG00000020318) #21	ENSJJAG00000022204 #23	Eif4a1 (ENSJJAG00000022783) #24	ENSJJAG00000000114 #25	ENSJJAG00000006459 #26	Polr2a (ENSJJAG00000013049) #28	Slc35g3 (ENSJJAG00000015077) #29	ENSJJAG00000015430 #30	Chrnb1 (ENSJJAG00000015708)	ENSJJAG00000015954 #31	Tmem102 (ENSJJAG00000016211)	Spem2 (ENSJJAG00000016321) #33	Spem1 (ENSJJAG00000016635) #34	Nlgn2 (ENSJJAG00000020774) #35	Tmem256 (ENSJJAG00000020908) #36
Kangaroo rat	MODERN SPECIES	338	Kcnab3 (ENSDORG00000010720)	Rnf227 (ENSDORG00000010719)	Chd3 (ENSDORG00000010713) #7	Cyb5d1 (ENSDORG00000023948) #9	Naa38 (ENSDORG00000010169) #8	Tmem88 (ENSDORG00000025174) #10	Kdm6b (ENSDORG00000010167) #11	Dnah2 (ENSDORG00000008370) #12	Efnb3 (ENSDORG00000026303) #13	Wrap53 (ENSDORG00000008488) #14	Trp53 (ENSDORG00000026783) #15	Atp1b2 (ENSDORG00000025939) #16	ENSDORG00000029595	Sat2 (ENSDORG00000029725) #19	Fxr2 (ENSDORG00000014232) #20	Sox15 (ENSDORG00000014230) #22	Mpdu1 (ENSDORG00000014229) #21	ENSDORG00000014227 #23	Eif4a1 (ENSDORG00000014225) #24	Senp3 (ENSDORG00000014223) #25	ENSDORG00000014221 #26	Polr2a (ENSDORG00000008667) #28	Slc35g3 (ENSDORG00000028094) #29	ENSDORG00000026747 #30	Chrnb1 (ENSDORG00000008663)	Fgf11 (ENSDORG00000008661) #31	Tmem102 (ENSDORG00000008659)	Spem2 (ENSDORG00000008657) #33	Spem1 (ENSDORG00000008656) #34	Nlgn2 (ENSDORG00000008653) #35	Neurl4 (ENSDORG00000000321)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Sciuridae	ANCESTRAL SPECIES	25	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Marmotini	ANCESTRAL SPECIES	42	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Marmotini_b	ANCESTRAL SPECIES	35	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.a ##24	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517
Squirrel	MODERN SPECIES	195	RNF227 (ENSSTOG00000026440)	CHD3 (ENSSTOG00000025907) #7	CYB5D1 (ENSSTOG00000001060) #9	TMEM88 (ENSSTOG00000001057) #10	NAA38 (ENSSTOG00000025950) #8	KDM6B (ENSSTOG00000019400) #11	DNAH2 (ENSSTOG00000002487) #12	EFNB3 (ENSSTOG00000029036) #13	WRAP53 (ENSSTOG00000002484) #14	TP53 (ENSSTOG00000022774) #15	ATP1B2 (ENSSTOG00000019448) #16	SHBG (ENSSTOG00000029233) #18	SAT2 (ENSSTOG00000005681) #19	FXR2 (ENSSTOG00000005657) #20	MPDU1 (ENSSTOG00000005636) #21	SOX15 (ENSSTOG00000005654) #22	EIF4A1 (ENSSTOG00000024814) #24	SENP3 (ENSSTOG00000001835) #25	TNFSF13 (ENSSTOG00000034739) #26	TNFSF12 (ENSSTOG00000005614) #27	POLR2A (ENSSTOG00000001304) #28	ENSSTOG00000022540 #29	ENSSTOG00000000346 #30	CHRNB1 (ENSSTOG00000000341)	FGF11 (ENSSTOG00000000339) #31	TMEM102 (ENSSTOG00000000338)	SPEM3 (ENSSTOG00000033242)	SPEM2 (ENSSTOG00000030621) #33	SPEM1 (ENSSTOG00000031005) #34	NLGN2 (ENSSTOG00000000335) #35	TMEM256 (ENSSTOG00000007712) #36
Arctic ground squirrel	MODERN SPECIES	77	TRAPPC1 (ENSUPAG00010016002)	KCNAB3 (ENSUPAG00010015981)	CHD3 (ENSUPAG00010015846) #7	CYB5D1 (ENSUPAG00010015824) #9	NAA38 (ENSUPAG00010015814) #8	TMEM88 (ENSUPAG00010015803) #10	KDM6B (ENSUPAG00010015706) #11	DNAH2 (ENSUPAG00010015485) #12	EFNB3 (ENSUPAG00010015466) #13	WRAP53 (ENSUPAG00010015444) #14	TP53 (ENSUPAG00010015398) #15	ATP1B2 (ENSUPAG00010015380) #16	SHBG (ENSUPAG00010015369) #18	SAT2 (ENSUPAG00010015359) #19	FXR2 (ENSUPAG00010015345) #20	SOX15 (ENSUPAG00010015340) #22	MPDU1 (ENSUPAG00010015329) #21	CD68 (ENSUPAG00010015311) #23	ENSUPAG00010015286 ##24	SENP3 (ENSUPAG00010015274) #25	TNFSF13 (ENSUPAG00010015271) #26	TNFSF12 (ENSUPAG00010015258) #27	POLR2A (ENSUPAG00010015140) #28	ENSUPAG00010015133 #29	ZBTB4 (ENSUPAG00010015112) #30	CHRNB1 (ENSUPAG00010015072)	FGF11 (ENSUPAG00010015051) #31	ENSUPAG00010015030	TMEM102 (ENSUPAG00010015024)	ENSUPAG00010014988 #33	NLGN2 (ENSUPAG00010014953) #35
Alpin marmot	MODERN SPECIES	92	CNTROB (ENSMMMG00000020034)	TRAPPC1 (ENSMMMG00000020030)	KCNAB3 (ENSMMMG00000020007)	CHD3 (ENSMMMG00000019936) #7	CYB5D1 (ENSMMMG00000019930) #9	NAA38 (ENSMMMG00000019920) #8	TMEM88 (ENSMMMG00000019917) #10	KDM6B (ENSMMMG00000019902) #11	EFNB3 (ENSMMMG00000019770) #13	WRAP53 (ENSMMMG00000019760) #14	TP53 (ENSMMMG00000019747) #15	ATP1B2 (ENSMMMG00000019742) #16	SHBG (ENSMMMG00000019737) #18	SAT2 (ENSMMMG00000019728) #19	FXR2 (ENSMMMG00000019720) #20	SOX15 (ENSMMMG00000019717) #22	MPDU1 (ENSMMMG00000019711) #21	CD68 (ENSMMMG00000019708) #23	EIF4A1 (ENSMMMG00000019682) #24	SENP3 (ENSMMMG00000019674) #25	TNFSF13 (ENSMMMG00000019673) #26	TNFSF12 (ENSMMMG00000019660) #27	POLR2A (ENSMMMG00000019616) #28	ENSMMMG00000019610 #29	ZBTB4 (ENSMMMG00000019607) #30	CHRNB1 (ENSMMMG00000019597)	FGF11 (ENSMMMG00000019583) #31	ENSMMMG00000019577 #32	SPEM2 (ENSMMMG00000019557) #33	SPEM1 (ENSMMMG00000019555) #34	NLGN2 (ENSMMMG00000019538) #35
Eurasian red squirrel	MODERN SPECIES	12	TRAPPC1 (ENSSVLG00005013628)	KCNAB3 (ENSSVLG00005013744)	RNF227 (ENSSVLG00005013817)	CHD3 (ENSSVLG00005013898) #7	CYB5D1 (ENSSVLG00005013988) #9	NAA38 (ENSSVLG00005014059) #8	TMEM88 (ENSSVLG00005014138) #10	KDM6B (ENSSVLG00005014210) #11	EFNB3 (ENSSVLG00005015242) #13	WRAP53 (ENSSVLG00005015335) #14	TP53 (ENSSVLG00005015536) #15	ATP1B2 (ENSSVLG00005015878) #16	SHBG (ENSSVLG00005015979) #18	SAT2 (ENSSVLG00005016345) #19	FXR2 (ENSSVLG00005016396) #20	SOX15 (ENSSVLG00005016448) #22	MPDU1 (ENSSVLG00005016491) #21	CD68 (ENSSVLG00005016549) #23	EIF4A1 (ENSSVLG00005016680) #24	SENP3 (ENSSVLG00005017018) #25	ENSSVLG00005017113 #26	POLR2A (ENSSVLG00005017374) #28	ENSSVLG00005006468 #29	ZBTB4 (ENSSVLG00005006487) #30	CHRNB1 (ENSSVLG00005006512)	ENSSVLG00005006577 #31	TMEM102 (ENSSVLG00005006623)	SPEM2 (ENSSVLG00005006720) #33	SPEM1 (ENSSVLG00005006743) #34	NLGN2 (ENSSVLG00005006780) #35	TMEM256 (ENSSVLG00005006818) #36
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34	ENSGT00940000160598 #35
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34	ENSGT00940000160598 #35
Hystricomorpha_b	ANCESTRAL SPECIES	22	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.a ##24	ENSGT00940000153889.e.a.b.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Long-tailed chinchilla	MODERN SPECIES	174	KCNAB3 (ENSCLAG00000007675)	RNF227 (ENSCLAG00000008516)	CHD3 (ENSCLAG00000010523) #7	CYB5D1 (ENSCLAG00000016495) #9	NAA38 (ENSCLAG00000015879) #8	TMEM88 (ENSCLAG00000006940) #10	KDM6B (ENSCLAG00000006879) #11	DNAH2 (ENSCLAG00000008437) #12	EFNB3 (ENSCLAG00000008030) #13	ENSCLAG00000008651 #14	TP53 (ENSCLAG00000007189) #15	ATP1B2 (ENSCLAG00000015532) #16	ENSCLAG00000016382	SAT2 (ENSCLAG00000006730) #19	FXR2 (ENSCLAG00000007322) #20	SOX15 (ENSCLAG00000007796) #22	MPDU1 (ENSCLAG00000009603) #21	CD68 (ENSCLAG00000011317) #23	ENSCLAG00000006786 ##24	SENP3 (ENSCLAG00000009353) #25	TNFSF13 (ENSCLAG00000009671) #26	TNFSF12 (ENSCLAG00000008538) #27	POLR2A (ENSCLAG00000012196) #28	ENSCLAG00000009172 #29	ZBTB4 (ENSCLAG00000011122) #30	CHRNB1 (ENSCLAG00000014488)	FGF11 (ENSCLAG00000015858) #31	TMEM102 (ENSCLAG00000013876)	SPEM2 (ENSCLAG00000008313) #33	SPEM1 (ENSCLAG00000008667) #34	NLGN2 (ENSCLAG00000014101) #35
Degu	MODERN SPECIES	139	KCNAB3 (ENSODEG00000017706)	RNF227 (ENSODEG00000017826)	CHD3 (ENSODEG00000017785) #7	CYB5D1 (ENSODEG00000017742) #9	NAA38 (ENSODEG00000017702) #8	TMEM88 (ENSODEG00000017852) #10	KDM6B (ENSODEG00000017794) #11	DNAH2 (ENSODEG00000017776) #12	EFNB3 (ENSODEG00000017671) #13	WRAP53 (ENSODEG00000017648) #14	TP53 (ENSODEG00000017683) #15	ATP1B2 (ENSODEG00000017782) #16	SHBG (ENSODEG00000017630) #18	ENSODEG00000017643 #19	FXR2 (ENSODEG00000017803) #20	SOX15 (ENSODEG00000017501) #22	MPDU1 (ENSODEG00000017856) #21	CD68 (ENSODEG00000017563) #23	EIF4A1 (ENSODEG00000017512) #24	SENP3 (ENSODEG00000017615) #25	ENSODEG00000017544 #26	POLR2A (ENSODEG00000017674) #28	ENSODEG00000017743 #29	ENSODEG00000017609 #30	CHRNB1 (ENSODEG00000017475)	FGF11 (ENSODEG00000017497) #31	TMEM102 (ENSODEG00000017500)	SPEM2 (ENSODEG00000017647) #33	SPEM1 (ENSODEG00000017419) #34	NLGN2 (ENSODEG00000017940) #35	TMEM256 (ENSODEG00000017543) #36
Guinea pig	MODERN SPECIES	61	RNF227 (ENSCPOG00000027016)	CHD3 (ENSCPOG00000022653) #7	CYB5D1 (ENSCPOG00000004427) #9	NAA38 (ENSCPOG00000032412) #8	TMEM88 (ENSCPOG00000033148) #10	KDM6B (ENSCPOG00000004414) #11	DNAH2 (ENSCPOG00000004386) #12	EFNB3 (ENSCPOG00000022473) #13	WRAP53 (ENSCPOG00000002599) #14	TP53 (ENSCPOG00000014252) #15	ATP1B2 (ENSCPOG00000034285) #16	SHBG (ENSCPOG00000011310) #18	SAT2 (ENSCPOG00000031404) #19	FXR2 (ENSCPOG00000023303) #20	MPDU1 (ENSCPOG00000032454) #21	SOX15 (ENSCPOG00000004915) #22	CD68 (ENSCPOG00000004905) #23	EIF4A1 (ENSCPOG00000004900) #24	SENP3 (ENSCPOG00000004897) #25	TNFSF13 (ENSCPOG00000034597) #26	TNFSF12 (ENSCPOG00000004894) #27	POLR2A (ENSCPOG00000014812) #28	ENSCPOG00000014811 #29	ZBTB4 (ENSCPOG00000033470) #30	CHRNB1 (ENSCPOG00000014809)	FGF11 (ENSCPOG00000034488) #31	TMEM102 (ENSCPOG00000033790)	SPEM2 (ENSCPOG00000023905) #33	SPEM1 (ENSCPOG00000022568) #34	NLGN2 (ENSCPOG00000019317) #35	TMEM256 (ENSCPOG00000036227) #36
Naked mole-rat female	MODERN SPECIES	12	CNTROB (ENSHGLG00000016550)	TRAPPC1 (ENSHGLG00000035580)	KCNAB3 (ENSHGLG00000016886)	RNF227 (ENSHGLG00000045551)	CHD3 (ENSHGLG00000012017) #7	CYB5D1 (ENSHGLG00000010161) #9	NAA38 (ENSHGLG00000033435) #8	TMEM88 (ENSHGLG00000034924) #10	ENSHGLG00000038949 #11	WRAP53 (ENSHGLG00000014000) #14	Tp53 (ENSHGLG00000038082) #15	ENSHGLG00000011044 #16	ENSHGLG00000042748 #19	FXR2 (ENSHGLG00000012247) #20	ENSHGLG00000047155 #21	ENSHGLG00000047752 #22	ENSHGLG00000047031	ENSHGLG00000033365 ##24	TNFSF13 (ENSHGLG00000010768) #26	TNFSF12 (ENSHGLG00000010122) #27	ENSHGLG00000011091 #29	ENSHGLG00000046218 #30	FGF11 (ENSHGLG00000042024) #31	ENSHGLG00000049999	SPEM2 (ENSHGLG00000009650) #33	NLGN2 (ENSHGLG00000041822) #35	TMEM256 (ENSHGLG00000018691) #36	PLSCR3 (ENSHGLG00000019015) #37	KCTD11 (ENSHGLG00000047152)	ENSHGLG00000018261	GPS2 (ENSHGLG00000011192)
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a
Eulipotyphla	ANCESTRAL SPECIES	1								ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00930000151033 #28	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049389 #34	ENSGT00940000160598 #35	ENSGT00390000000334 #36
Hedgehog	MODERN SPECIES	2697															FXR2 (ENSEEUG00000013410) #20	SOX15 (ENSEEUG00000013305) #22	MPDU1 (ENSEEUG00000013204) #21
Common shrew	MODERN SPECIES	709								DNAH2 (ENSSARG00000006258) #12	EFNB3 (ENSSARG00000006251) #13	WRAP53 (ENSSARG00000006219) #14	TP53 (ENSSARG00000006206) #15	ATP1B2 (ENSSARG00000006199) #16	SHBG (ENSSARG00000006171) #18	ENSSARG00000006154 #19	FXR2 (ENSSARG00000006113) #20	SOX15 (ENSSARG00000006102) #22	MPDU1 (ENSSARG00000006085) #21	CD68 (ENSSARG00000006037) #23	EIF4A1 (ENSSARG00000006017) #24	SENP3 (ENSSARG00000005973) #25	ENSSARG00000005951 #26	POLR2A (ENSSARG00000005875) #28	ZBTB4 (ENSSARG00000005864) #30	CHRNB1 (ENSSARG00000005847)	FGF11 (ENSSARG00000005833) #31	TMEM102 (ENSSARG00000005828)	SPEM1 (ENSSARG00000005792) #34	NLGN2 (ENSSARG00000005689) #35	TMEM256 (ENSSARG00000005672) #36
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Suina	ANCESTRAL SPECIES		ENSGT00940000153761.A	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Chacoan peccary	MODERN SPECIES	67									ENSCWAG00000000005 #12	EFNB3 (ENSCWAG00000004593) #13	WRAP53 (ENSCWAG00000004521) #14	TP53 (ENSCWAG00000004451) #15	ATP1B2 (ENSCWAG00000004409) #16	SAT2 (ENSCWAG00000004358) #19	FXR2 (ENSCWAG00000004314) #20	SOX15 (ENSCWAG00000004275) #22	MPDU1 (ENSCWAG00000004250) #21	ENSCWAG00000004172	EIF4A1 (ENSCWAG00000004092) #24	SENP3 (ENSCWAG00000004036) #25	TNFSF13 (ENSCWAG00000003798) #26	POLR2A (ENSCWAG00000003754) #28	ENSCWAG00000003732 #29	ZBTB4 (ENSCWAG00000003716) #30	CHRNB1 (ENSCWAG00000003664)	FGF11 (ENSCWAG00000003645) #31	TMEM102 (ENSCWAG00000003640)	SPEM2 (ENSCWAG00000003617) #33	SPEM1 (ENSCWAG00000003610) #34	NLGN2 (ENSCWAG00000003600) #35	TMEM256 (ENSCWAG00000003593) #36
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Odontoceti	ANCESTRAL SPECIES	17	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582.j #9	ENSGT00390000018418.d #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661.c.a	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Odontoceti_a	ANCESTRAL SPECIES	18	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582.j #9	ENSGT00390000018418.d #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661.c.a	ENSGT00940000158058 #31	ENSGT00510000049389 #34	ENSGT00940000160598.q #35	ENSGT00390000000334 #36	ENSGT00940000161755 #37
Odontoceti_b	ANCESTRAL SPECIES	20	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582.j #9	ENSGT00390000018418.d #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661.c.a	ENSGT00940000158058.k.a #31	ENSGT01050000244976.b.b.b.a.a.a.a.a	ENSGT00950000183608	ENSGT00510000049558.a #33	ENSGT00510000049389 #34
Monodontidae	ANCESTRAL SPECIES	21	ENSGT00940000153761.A	ENSGT00940000159306	ENSGT00940000158001 #7	ENSGT00440000037582.j #9	ENSGT00390000018418.d #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000164775	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661.d.b	ENSGT00940000158058.k.a #31	ENSGT01050000244976.b.b.b.a.a.a.a.a	ENSGT00950000183608	ENSGT00510000049558.a #33	ENSGT00510000049389 #34
Beluga whale	MODERN SPECIES	43	GUCY2D (ENSDLEG00000021684)	CNTROB (ENSDLEG00000021631)	TRAPPC1 (ENSDLEG00000021618)	KCNAB3 (ENSDLEG00000021582)	CHD3 (ENSDLEG00000021310) #7	NAA38 (ENSDLEG00000021236) #8	TMEM88 (ENSDLEG00000021234) #10	KDM6B (ENSDLEG00000021231) #11	DNAH2 (ENSDLEG00000021195) #12	EFNB3 (ENSDLEG00000021183) #13	WRAP53 (ENSDLEG00000021177) #14	TP53 (ENSDLEG00000021163) #15	ATP1B2 (ENSDLEG00000021158) #16	SHBG (ENSDLEG00000021151) #18	FXR2 (ENSDLEG00000021129) #20	SOX15 (ENSDLEG00000021126) #22	MPDU1 (ENSDLEG00000021110) #21	ENSDLEG00000021095	EIF4A1 (ENSDLEG00000021084) #24	SENP3 (ENSDLEG00000021080) #25	TNFSF13 (ENSDLEG00000021073) #26	TNFSF12 (ENSDLEG00000021064) #27	POLR2A (ENSDLEG00000021049) #28	ENSDLEG00000021044 #29	ZBTB4 (ENSDLEG00000021042) #30	ENSDLEG00000021039 #36	PLSCR3 (ENSDLEG00000021033) #37	TNK1 (ENSDLEG00000021019)	TMEM95 (ENSDLEG00000021008)	ACAP1 (ENSDLEG00000021002)	ENSDLEG00000020994
Narwhal	MODERN SPECIES	316	KCNAB3 (ENSMMNG00015021334)	CHD3 (ENSMMNG00015021409) #7	ENSMMNG00015021486 #8	CYB5D1 (ENSMMNG00015021498) #9	TMEM88 (ENSMMNG00015021511) #10	KDM6B (ENSMMNG00015021524) #11	DNAH2 (ENSMMNG00015021587) #12	EFNB3 (ENSMMNG00015016009) #13	WRAP53 (ENSMMNG00015016083) #14	TP53 (ENSMMNG00015016161) #15	ATP1B2 (ENSMMNG00015016318) #16	SHBG (ENSMMNG00015016387) #18	SAT2 (ENSMMNG00015016481) #19	FXR2 (ENSMMNG00015016533) #20	MPDU1 (ENSMMNG00015016603) #21	SOX15 (ENSMMNG00015016727) #22	ENSMMNG00015016759	EIF4A1 (ENSMMNG00015016818) #24	SENP3 (ENSMMNG00015016888) #25	TNFSF13 (ENSMMNG00015016945) #26	TNFSF12 (ENSMMNG00015017065) #27	ENSMMNG00015017127	POLR2A (ENSMMNG00015017161) #28	ENSMMNG00015017226 #29	ZBTB4 (ENSMMNG00015017253) #30	ENSMMNG00015017276	ENSMMNG00015017297	ENSMMNG00015017339 #31	ENSMMNG00015017387	ENSMMNG00015017405	SPEM2 (ENSMMNG00015017425) #33
Vaquita	MODERN SPECIES	12	TRAPPC1 (ENSPSNG00000022349)	KCNAB3 (ENSPSNG00000022358)	RNF227 (ENSPSNG00000022366)	CHD3 (ENSPSNG00000022376) #7	ENSPSNG00000022413 #8	CYB5D1 (ENSPSNG00000022418) #9	TMEM88 (ENSPSNG00000022422) #10	KDM6B (ENSPSNG00000022425) #11	DNAH2 (ENSPSNG00000022448) #12	EFNB3 (ENSPSNG00000009549) #13	WRAP53 (ENSPSNG00000009680) #14	TP53 (ENSPSNG00000009871) #15	ATP1B2 (ENSPSNG00000009989) #16	SHBG (ENSPSNG00000010187) #18	FXR2 (ENSPSNG00000010784) #20	SOX15 (ENSPSNG00000010908) #22	MPDU1 (ENSPSNG00000010966) #21	ENSPSNG00000011027	SENP3 (ENSPSNG00000011169) #25	TNFSF13 (ENSPSNG00000011368) #26	TNFSF12 (ENSPSNG00000011635) #27	POLR2A (ENSPSNG00000011689) #28	ENSPSNG00000011760 #29	ZBTB4 (ENSPSNG00000011794) #30	ENSPSNG00000011840	ENSPSNG00000011912 #31	ENSPSNG00000011985	ENSPSNG00000012036 #33	SPEM1 (ENSPSNG00000012095) #34	ENSPSNG00000012182 #35	PLSCR3 (ENSPSNG00000012274) #37
Dolphin	MODERN SPECIES	1363	TRAPPC1 (ENSTTRG00000010306)	KCNAB3 (ENSTTRG00000010304)	ENSTTRG00000010303	CHD3 (ENSTTRG00000010295) #7	CYB5D1 (ENSTTRG00000010293) #9	TMEM88 (ENSTTRG00000010291) #10	KDM6B (ENSTTRG00000010285) #11	DNAH2 (ENSTTRG00000010261) #12	EFNB3 (ENSTTRG00000010258) #13	WRAP53 (ENSTTRG00000010253) #14	TP53 (ENSTTRG00000010250) #15	ATP1B2 (ENSTTRG00000010247) #16	SHBG (ENSTTRG00000010243) #18	SAT2 (ENSTTRG00000010238) #19	FXR2 (ENSTTRG00000010231) #20	SOX15 (ENSTTRG00000010225) #22	MPDU1 (ENSTTRG00000010221) #21	ENSTTRG00000010216	EIF4A1 (ENSTTRG00000010208) #24	SENP3 (ENSTTRG00000010205) #25	TNFSF13 (ENSTTRG00000010198) #26
Sperm whale	MODERN SPECIES	865													SHBG (ENSPCTG00005018758) #18	SAT2 (ENSPCTG00005019401) #19	FXR2 (ENSPCTG00005019504) #20	SOX15 (ENSPCTG00005019543) #22	MPDU1 (ENSPCTG00005019574) #21	CD68 (ENSPCTG00005019631)	EIF4A1 (ENSPCTG00005019745) #24
Blue whale	MODERN SPECIES	12	CHD3 (ENSBMSG00010015969) #7	CYB5D1 (ENSBMSG00010015944) #9	ENSBMSG00010015700 #8	TMEM88 (ENSBMSG00010015664) #10	KDM6B (ENSBMSG00010015645) #11	DNAH2 (ENSBMSG00010015276) #12	EFNB3 (ENSBMSG00010015210) #13	WRAP53 (ENSBMSG00010015133) #14	TP53 (ENSBMSG00010015103) #15	ATP1B2 (ENSBMSG00010015043) #16	SHBG (ENSBMSG00010014909) #18	ENSBMSG00010014775	ENSBMSG00010014736 #31	SAT2 (ENSBMSG00010014690) #19	FXR2 (ENSBMSG00010014611) #20	SOX15 (ENSBMSG00010014575) #22	MPDU1 (ENSBMSG00010014542) #21	CD68 (ENSBMSG00010014507) #23	SENP3 (ENSBMSG00010014371) #25	ENSBMSG00010014024 #26	ENSBMSG00010013958	POLR2A (ENSBMSG00010013868) #28	ENSBMSG00010013827 #29	ZBTB4 (ENSBMSG00010013806) #30	ENSBMSG00010021972	ENSBMSG00010021964 #31	TMEM102 (ENSBMSG00010021957)	SPEM2 (ENSBMSG00010021951) #33	SPEM1 (ENSBMSG00010021944) #34	NLGN2 (ENSBMSG00010021940) #35	ENSBMSG00010021932 #36
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Yarkand deer	MODERN SPECIES	28	KCNAB3 (ENSCHYG00000014047)	RNF227 (ENSCHYG00000013986)	CYB5D1 (ENSCHYG00000013871) #9	NAA38 (ENSCHYG00000013759) #8	TMEM88 (ENSCHYG00000013718) #10	KDM6B (ENSCHYG00000013585) #11	CHD3 (ENSCHYG00000012831) #7	DNAH2 (ENSCHYG00000012149) #12	ENSCHYG00000011626 #13	TP53 (ENSCHYG00000011475) #15	ATP1B2 (ENSCHYG00000011403) #16	ENSCHYG00000011360	SHBG (ENSCHYG00000011068) #18	SAT2 (ENSCHYG00000010916) #19	FXR2 (ENSCHYG00000010582) #20	SOX15 (ENSCHYG00000010516) #22	MPDU1 (ENSCHYG00000010340) #21	ENSCHYG00000010254 #23	SENP3 (ENSCHYG00000009975) #25	TNFSF13 (ENSCHYG00000009384) #26	ENSCHYG00000009243 #27	POLR2A (ENSCHYG00000008818) #28	ENSCHYG00000008765 #29	ZBTB4 (ENSCHYG00000008714) #30	CHRNB1 (ENSCHYG00000008632)	FGF11 (ENSCHYG00000008566) #31	ENSCHYG00000008554	TMEM102 (ENSCHYG00000008540)	SPEM2 (ENSCHYG00000008464) #33	SPEM1 (ENSCHYG00000008442) #34	NLGN2 (ENSCHYG00000008415) #35
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A.h #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A.h #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A.h #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Goat	MODERN SPECIES	10	KCNAB3 (ENSCHIG00000011995)	RNF227 (ENSCHIG00000009394)	CHD3 (ENSCHIG00000016737) #7	CYB5D1 (ENSCHIG00000012741) #9	NAA38 (ENSCHIG00000023618) #8	TMEM88 (ENSCHIG00000017315) #10	KDM6B (ENSCHIG00000017251) #11	DNAH2 (ENSCHIG00000018276) #12	EFNB3 (ENSCHIG00000027243) #13	WRAP53 (ENSCHIG00000015730) #14	TP53 (ENSCHIG00000025000) #15	ATP1B2 (ENSCHIG00000022273) #16	SAT2 (ENSCHIG00000008642) #19	SHBG (ENSCHIG00000019887) #18	FXR2 (ENSCHIG00000004007) #20	SOX15 (ENSCHIG00000023104) #22	MPDU1 (ENSCHIG00000019131) #21	CD68 (ENSCHIG00000023275) #23	EIF4A1 (ENSCHIG00000022153) #24	SENP3 (ENSCHIG00000013302) #25	TNFSF13 (ENSCHIG00000019003) #26	TNFSF12 (ENSCHIG00000000561) #27	POLR2A (ENSCHIG00000027173) #28	ENSCHIG00000025830 #29	ZBTB4 (ENSCHIG00000008943) #30	CHRNB1 (ENSCHIG00000014506)	FGF11 (ENSCHIG00000007435) #31	TMEM102 (ENSCHIG00000014552)	SPEM2 (ENSCHIG00000016697) #33	SPEM1 (ENSCHIG00000023917) #34	NLGN2 (ENSCHIG00000021280) #35
Rambouillet Sheep	MODERN SPECIES	2	RNF227 (ENSOARG00020023509)	CHD3 (ENSOARG00020023540) #7	CYB5D1 (ENSOARG00020009989) #9	NAA38 (ENSOARG00020010108) #8	TMEM88 (ENSOARG00020010194) #10	KDM6B (ENSOARG00020010242) #11	DNAH2 (ENSOARG00020010512) #12	EFNB3 (ENSOARG00020011424) #13	WRAP53 (ENSOARG00020011477) #14	TP53 (ENSOARG00020011609) #15	ATP1B2 (ENSOARG00020011738) #16	SHBG (ENSOARG00020011830) #18	SAT2 (ENSOARG00020012041) #19	FXR2 (ENSOARG00020012154) #20	MPDU1 (ENSOARG00020012323) #21	SOX15 (ENSOARG00020012722) #22	CD68 (ENSOARG00020012774) #23	EIF4A1 (ENSOARG00020012888) #24	SENP3 (ENSOARG00020013096) #25	TNFSF13 (ENSOARG00020013222) #26	TNFSF12 (ENSOARG00020013736) #27	POLR2A (ENSOARG00020013804) #28	ENSOARG00020014181 #29	ZBTB4 (ENSOARG00020014211) #30	CHRNB1 (ENSOARG00020014250)	FGF11 (ENSOARG00020014550) #31	TMEM102 (ENSOARG00020014630)	ENSOARG00020014662	SPEM2 (ENSOARG00020014676) #33	SPEM1 (ENSOARG00020014716) #34	EIF5A (ENSOARG00020014758)
Bovinae	ANCESTRAL SPECIES		ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A.h #25	ENSGT00940000161488 #26	ENSGT00940000163167.e #27	ENSGT00940000163167.f #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33
Bos	ANCESTRAL SPECIES	1	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A.h #25	ENSGT00940000161488 #26	ENSGT00940000163167.e #27	ENSGT00940000163167.f #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33
Bos_a	ANCESTRAL SPECIES		ENSGT00940000159306	ENSGT00940000166612	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A.h #25	ENSGT00940000161488 #26	ENSGT00940000163167.f #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Domestic yak	MODERN SPECIES	10	TRAPPC1 (ENSBGRG00000026750)	KCNAB3 (ENSBGRG00000026751)	CHD3 (ENSBGRG00000026756) #7	CYB5D1 (ENSBGRG00000010801) #9	NAA38 (ENSBGRG00000010936) #8	TMEM88 (ENSBGRG00000011023) #10	KDM6B (ENSBGRG00000011083) #11	DNAH2 (ENSBGRG00000011513) #12	EFNB3 (ENSBGRG00000013255) #13	WRAP53 (ENSBGRG00000013328) #14	TP53 (ENSBGRG00000013504) #15	ATP1B2 (ENSBGRG00000013707) #16	SHBG (ENSBGRG00000013830) #18	SAT2 (ENSBGRG00000014643) #19	FXR2 (ENSBGRG00000014808) #20	SOX15 (ENSBGRG00000015270) #22	MPDU1 (ENSBGRG00000015329) #21	CD68 (ENSBGRG00000015552) #23	EIF4A1 (ENSBGRG00000015731) #24	ENSBGRG00000016131 #25	TNFSF13 (ENSBGRG00000016192) #26	TNFSF12 (ENSBGRG00000016640) #27	POLR2A (ENSBGRG00000016762) #28	ENSBGRG00000018813 #29	ENSBGRG00000018851 #30	CHRNB1 (ENSBGRG00000018985)	FGF11 (ENSBGRG00000019230) #31	ENSBGRG00000019344	TMEM102 (ENSBGRG00000019375)	SPEM2 (ENSBGRG00000019492) #33	SPEM1 (ENSBGRG00000019536) #34
Wild yak	MODERN SPECIES	680							ENSBMUG00000021898 #11	DNAH2 (ENSBMUG00000021802) #12	EFNB3 (ENSBMUG00000021677) #13	WRAP53 (ENSBMUG00000021653) #14	TP53 (ENSBMUG00000021612) #15	ATP1B2 (ENSBMUG00000021597) #16	SHBG (ENSBMUG00000021535) #18	SAT2 (ENSBMUG00000021464) #19	FXR2 (ENSBMUG00000021449) #20	SOX15 (ENSBMUG00000021435) #22	ENSBMUG00000021432 #21	CD68 (ENSBMUG00000021412) #23	EIF4A1 (ENSBMUG00000021378) #24	SENP3 (ENSBMUG00000021344) #25	TNFSF13 (ENSBMUG00000021319) #26
Bos_b	ANCESTRAL SPECIES	15	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A.h #25	ENSGT00940000161488 #26	ENSGT00940000163167.e #27	ENSGT00940000163167.f #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Hybrid Bos Indicus	MODERN SPECIES	10	KCNAB3 (ENSBIXG00005020380)	RNF227 (ENSBIXG00005020408)	CHD3 (ENSBIXG00005020807) #7	NAA38 (ENSBIXG00005003526) #8	CYB5D1 (ENSBIXG00005020864) #9	TMEM88 (ENSBIXG00005020886) #10	KDM6B (ENSBIXG00005020932) #11	DNAH2 (ENSBIXG00005021869) #12	EFNB3 (ENSBIXG00005021928) #13	WRAP53 (ENSBIXG00005022042) #14	TP53 (ENSBIXG00005022080) #15	ATP1B2 (ENSBIXG00005022109) #16	SHBG (ENSBIXG00005022236) #18	SAT2 (ENSBIXG00005022291) #19	FXR2 (ENSBIXG00005022344) #20	SOX15 (ENSBIXG00005022393) #22	MPDU1 (ENSBIXG00005022416) #21	CD68 (ENSBIXG00005022432) #23	EIF4A1 (ENSBIXG00005022521) #24	ENSBIXG00005003849 #25	TNFSF13 (ENSBIXG00005022699) #26	ENSBIXG00005022739 #27	ENSBIXG00005022874 #27	POLR2A (ENSBIXG00005022938) #28	ENSBIXG00005022983 #29	ZBTB4 (ENSBIXG00005023002) #30	CHRNB1 (ENSBIXG00005023090)	ENSBIXG00005003940	TMEM102 (ENSBIXG00005007617)	SPEM2 (ENSBIXG00005023189) #33	SPEM1 (ENSBIXG00005023199) #34
Cow	MODERN SPECIES	10	KCNAB3 (ENSBTAG00000014940)	RNF227 (ENSBTAG00000051381)	CHD3 (ENSBTAG00000014377) #7	CYB5D1 (ENSBTAG00000051958) #9	NAA38 (ENSBTAG00000014695) #8	TMEM88 (ENSBTAG00000014693) #10	KDM6B (ENSBTAG00000048062) #11	DNAH2 (ENSBTAG00000008605) #12	EFNB3 (ENSBTAG00000052025) #13	WRAP53 (ENSBTAG00000001071) #14	TP53 (ENSBTAG00000001069) #15	ATP1B2 (ENSBTAG00000013680) #16	SHBG (ENSBTAG00000004226) #18	SAT2 (ENSBTAG00000004222) #19	FXR2 (ENSBTAG00000005462) #20	SOX15 (ENSBTAG00000005461) #22	MPDU1 (ENSBTAG00000000134) #21	CD68 (ENSBTAG00000000133) #23	EIF4A1 (ENSBTAG00000000132) #24	SENP3 (ENSBTAG00000000131) #25	TNFSF13 (ENSBTAG00000000130) #26	TNFSF12 (ENSBTAG00000031725) #27	ENSBTAG00000053047 #27	POLR2A (ENSBTAG00000046765) #28	ZBTB4 (ENSBTAG00000008289) #30	CHRNB1 (ENSBTAG00000019242)	ENSBTAG00000050569	TMEM102 (ENSBTAG00000031737)	SPEM2 (ENSBTAG00000048416) #33	SPEM1 (ENSBTAG00000020253) #34	NLGN2 (ENSBTAG00000020252) #35
American bison	MODERN SPECIES	3101	TRAPPC1 (ENSBBBG00000012401)	KCNAB3 (ENSBBBG00000012395)	RNF227 (ENSBBBG00000012386)	CHD3 (ENSBBBG00000012374) #7	CYB5D1 (ENSBBBG00000012250) #9	NAA38 (ENSBBBG00000012243) #8	TMEM88 (ENSBBBG00000012238) #10	DNAH2 (ENSBBBG00000012222) #12	EFNB3 (ENSBBBG00000001957) #13	WRAP53 (ENSBBBG00000012081) #14	TP53 (ENSBBBG00000012045) #15	ATP1B2 (ENSBBBG00000011978) #16	SHBG (ENSBBBG00000011965) #18	SAT2 (ENSBBBG00000002207) #19	FXR2 (ENSBBBG00000011852) #20	SOX15 (ENSBBBG00000011837) #22	MPDU1 (ENSBBBG00000011831) #21	CD68 (ENSBBBG00000011808) #23	EIF4A1 (ENSBBBG00000011799) #24	SENP3 (ENSBBBG00000011747) #25	TNFSF13 (ENSBBBG00000011734) #26	ENSBBBG00000011694 #27	ENSBBBG00000011689 #27
Siberian musk deer	MODERN SPECIES	186	KCNAB3 (ENSMMSG00000015811)	RNF227 (ENSMMSG00000015787)	CHD3 (ENSMMSG00000015421) #7	CYB5D1 (ENSMMSG00000015342) #9	NAA38 (ENSMMSG00000015308) #8	TMEM88 (ENSMMSG00000015296) #10	KDM6B (ENSMMSG00000015220) #11	DNAH2 (ENSMMSG00000014788) #12	EFNB3 (ENSMMSG00000014754) #13	WRAP53 (ENSMMSG00000014723) #14	TP53 (ENSMMSG00000019953) #15	ATP1B2 (ENSMMSG00000019916) #16	SHBG (ENSMMSG00000019755) #18	SAT2 (ENSMMSG00000019706) #19	FXR2 (ENSMMSG00000019622) #20	SOX15 (ENSMMSG00000019596) #22	MPDU1 (ENSMMSG00000019573) #21	CD68 (ENSMMSG00000019526) #23	EIF4A1 (ENSMMSG00000019285) #24	SENP3 (ENSMMSG00000019230) #25	TNFSF13 (ENSMMSG00000018842) #26	ENSMMSG00000018798 #27	ENSMMSG00000018762 #27
Camelidae	ANCESTRAL SPECIES	34	ENSGT00940000153761.A	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000165567	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.b ##24	ENSGT00940000164775	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a
Arabian camel	MODERN SPECIES	7	TRAPPC1 (ENSCDRG00005011640)	KCNAB3 (ENSCDRG00005011520)	RNF227 (ENSCDRG00005011485)	CHD3 (ENSCDRG00005010391) #7	CYB5D1 (ENSCDRG00005010258) #9	NAA38 (ENSCDRG00005010184) #8	TMEM88 (ENSCDRG00005010143) #10	ENSCDRG00005010017 #11	DNAH2 (ENSCDRG00005009679) #12	EFNB3 (ENSCDRG00005009608) #13	WRAP53 (ENSCDRG00005009419) #14	TP53 (ENSCDRG00005009237) #15	ATP1B2 (ENSCDRG00005009178) #16	ENSCDRG00005009131	FXR2 (ENSCDRG00005008774) #20	SOX15 (ENSCDRG00005008731) #22	ENSCDRG00005008383 #21	ENSCDRG00005008276	EIF4A1 (ENSCDRG00005008099) #24	SENP3 (ENSCDRG00005008044) #25	TNFSF13 (ENSCDRG00005007879) #26	TNFSF12 (ENSCDRG00005007779) #27	POLR2A (ENSCDRG00005007634) #28	ENSCDRG00005007608 #29	ZBTB4 (ENSCDRG00005007582) #30	CHRNB1 (ENSCDRG00005007480)	FGF11 (ENSCDRG00005007445) #31	ENSCDRG00005007431	TMEM102 (ENSCDRG00005007414)	SPEM2 (ENSCDRG00005007316) #33	SPEM1 (ENSCDRG00005007307) #34
Alpaca	MODERN SPECIES	1440															FXR2 (ENSVPAG00000000147) #20	SOX15 (ENSVPAG00000000146) #22	ENSVPAG00000000145 #21	CD68 (ENSVPAG00000000144) #23	ENSVPAG00000000142 ##24
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a
Carnivora	ANCESTRAL SPECIES	24	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a
Caniformia	ANCESTRAL SPECIES	27	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Caniformia_b	ANCESTRAL SPECIES	28	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33
Ursidae	ANCESTRAL SPECIES	31	ENSGT00940000153761.A	ENSGT00940000159306	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a.b #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Ursus	ANCESTRAL SPECIES	24	ENSGT00940000153761.A	ENSGT00940000159306	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a.b #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34
American black bear	MODERN SPECIES	2473											TP53 (ENSUAMG00000000730) #15	ATP1B2 (ENSUAMG00000001206) #16	SHBG (ENSUAMG00000001210) #18	ENSUAMG00000001219 #19	FXR2 (ENSUAMG00000001330) #20	SOX15 (ENSUAMG00000003560) #22	MPDU1 (ENSUAMG00000003564) #21	CD68 (ENSUAMG00000003574) #23	EIF4A1 (ENSUAMG00000003583) #24	SENP3 (ENSUAMG00000003611) #25	TNFSF13 (ENSUAMG00000003616) #26	TNFSF12 (ENSUAMG00000003624) #27
Giant Panda	MODERN SPECIES	8	KCNAB3 (ENSAMEG00000002995)	CHD3 (ENSAMEG00000003025) #7	CYB5D1 (ENSAMEG00000016997) #9	TMEM88 (ENSAMEG00000030755) #10	NAA38 (ENSAMEG00000028193) #8	ENSAMEG00000016978 #11	DNAH2 (ENSAMEG00000016905) #12	ENSAMEG00000016900 #13	ENSAMEG00000024256 #13	WRAP53 (ENSAMEG00000016886) #14	TP53 (ENSAMEG00000016851) #15	ATP1B2 (ENSAMEG00000016828) #16	SHBG (ENSAMEG00000016816) #18	SAT2 (ENSAMEG00000027590) #19	FXR2 (ENSAMEG00000016775) #20	SOX15 (ENSAMEG00000016773) #22	MPDU1 (ENSAMEG00000016768) #21	ENSAMEG00000016765	EIF4A1 (ENSAMEG00000016753) #24	SENP3 (ENSAMEG00000016745) #25	TNFSF13 (ENSAMEG00000016736) #26	ENSAMEG00000027113 #27	POLR2A (ENSAMEG00000016265) #28	ENSAMEG00000016728 #29	ZBTB4 (ENSAMEG00000027486) #30	CHRNB1 (ENSAMEG00000016704)	FGF11 (ENSAMEG00000016691) #31	ENSAMEG00000030835	TMEM102 (ENSAMEG00000030198)	SPEM2 (ENSAMEG00000016687) #33	SPEM1 (ENSAMEG00000016685) #34
Mustelinae	ANCESTRAL SPECIES	27	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000164517	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Ferret	MODERN SPECIES	237	CHD3 (ENSMPUG00000008861) #7	ENSMPUG00000008872	CYB5D1 (ENSMPUG00000008880) #9	NAA38 (ENSMPUG00000008886) #8	ENSMPUG00000008900	KDM6B (ENSMPUG00000008906) #11	ENSMPUG00000019728	DNAH2 (ENSMPUG00000008919) #12	EFNB3 (ENSMPUG00000008984) #13	WRAP53 (ENSMPUG00000009013) #14	TP53 (ENSMPUG00000009017) #15	ATP1B2 (ENSMPUG00000009026) #16	SHBG (ENSMPUG00000009031) #18	SAT2 (ENSMPUG00000009043) #19	FXR2 (ENSMPUG00000009051) #20	SOX15 (ENSMPUG00000009383) #22	MPDU1 (ENSMPUG00000009390) #21	CD68 (ENSMPUG00000009464) #23	EIF4A1 (ENSMPUG00000009529) #24	SENP3 (ENSMPUG00000009627) #25	TNFSF13 (ENSMPUG00000009639) #26	POLR2A (ENSMPUG00000009648) #28	ENSMPUG00000019729 #29	ZBTB4 (ENSMPUG00000009666) #30	CHRNB1 (ENSMPUG00000009679)	FGF11 (ENSMPUG00000009684) #31	TMEM102 (ENSMPUG00000009776)	ENSMPUG00000009781	SPEM2 (ENSMPUG00000009788) #33	NLGN2 (ENSMPUG00000009795) #35	PLSCR3 (ENSMPUG00000009978) #37
American mink	MODERN SPECIES	204	KCNAB3 (ENSNVIG00000004551)	RNF227 (ENSNVIG00000004540)	CHD3 (ENSNVIG00000004454) #7	CYB5D1 (ENSNVIG00000004437) #9	NAA38 (ENSNVIG00000004415) #8	TMEM88 (ENSNVIG00000004407) #10	KDM6B (ENSNVIG00000004348) #11	DNAH2 (ENSNVIG00000004198) #12	EFNB3 (ENSNVIG00000004177) #13	WRAP53 (ENSNVIG00000004147) #14	TP53 (ENSNVIG00000004120) #15	ATP1B2 (ENSNVIG00000004107) #16	SHBG (ENSNVIG00000003885) #18	SAT2 (ENSNVIG00000003874) #19	FXR2 (ENSNVIG00000003843) #20	SOX15 (ENSNVIG00000003826) #22	MPDU1 (ENSNVIG00000003764) #21	CD68 (ENSNVIG00000003734) #23	EIF4A1 (ENSNVIG00000003608) #24	SENP3 (ENSNVIG00000003581) #25	TNFSF13 (ENSNVIG00000003512) #26	TNFSF12 (ENSNVIG00000003458) #27	POLR2A (ENSNVIG00000003359) #28	ENSNVIG00000003342 #29	ENSNVIG00000003323 #30	CHRNB1 (ENSNVIG00000003284)	ENSNVIG00000003264	TMEM102 (ENSNVIG00000003238)	SPEM3 (ENSNVIG00000003210)	SPEM2 (ENSNVIG00000003178) #33	SPEM1 (ENSNVIG00000003159) #34
Canidae	ANCESTRAL SPECIES	30	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34	ENSGT00940000160598 #35
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34	ENSGT00940000160598 #35
Dog	MODERN SPECIES	33	TRAPPC1 (ENSCAFG00845026764)	KCNAB3 (ENSCAFG00845026710)	RNF227 (ENSCAFG00845026680)	CHD3 (ENSCAFG00845026255) #7	CYB5D1 (ENSCAFG00845026052) #9	NAA38 (ENSCAFG00845026009) #8	TMEM88 (ENSCAFG00845025982) #10	KDM6B (ENSCAFG00845025737) #11	DNAH2 (ENSCAFG00845025082) #12	EFNB3 (ENSCAFG00845024900) #13	WRAP53 (ENSCAFG00845024805) #14	TP53 (ENSCAFG00845024647) #15	ATP1B2 (ENSCAFG00845024364) #16	SHBG (ENSCAFG00845024117) #18	FXR2 (ENSCAFG00845023779) #20	SOX15 (ENSCAFG00845023689) #22	MPDU1 (ENSCAFG00845023654) #21	CD68 (ENSCAFG00845023581) #23	EIF4A1 (ENSCAFG00845023393) #24	SENP3 (ENSCAFG00845023301) #25	TNFSF13 (ENSCAFG00845023070) #26	TNFSF12 (ENSCAFG00845022858) #27	POLR2A (ENSCAFG00845022622) #28	SLC35G6 (ENSCAFG00845022564) #29	ZBTB4 (ENSCAFG00845022515) #30	CHRNB1 (ENSCAFG00845022447)	FGF11 (ENSCAFG00845022382) #31	TMEM102 (ENSCAFG00845022362)	SPEM2 (ENSCAFG00845022220) #33	SPEM1 (ENSCAFG00845022190) #34	NLGN2 (ENSCAFG00845022150) #35
Dingo	MODERN SPECIES	373	KCNAB3 (ENSCAFG00020007397)	RNF227 (ENSCAFG00020007407)	CHD3 (ENSCAFG00020007422) #7	CYB5D1 (ENSCAFG00020007490) #9	NAA38 (ENSCAFG00020007495) #8	TMEM88 (ENSCAFG00020007497) #10	ENSCAFG00020007499 #11	DNAH2 (ENSCAFG00020007540) #12	EFNB3 (ENSCAFG00020007689) #13	ENSCAFG00020007694 #14	TP53 (ENSCAFG00020007703) #15	ATP1B2 (ENSCAFG00020007718) #16	SHBG (ENSCAFG00020007727) #18	SAT2 (ENSCAFG00020007745) #19	FXR2 (ENSCAFG00020007819) #20	SOX15 (ENSCAFG00020007832) #22	MPDU1 (ENSCAFG00020007837) #21	ENSCAFG00020007845	EIF4A1 (ENSCAFG00020007858) #24	SENP3 (ENSCAFG00020007894) #25	TNFSF13 (ENSCAFG00020007896) #26	TNFSF12 (ENSCAFG00020007901) #27	POLR2A (ENSCAFG00020007929) #28	ENSCAFG00020008394 #29	ENSCAFG00020008397 #30	CHRNB1 (ENSCAFG00020008402)	FGF11 (ENSCAFG00020008419) #31	TMEM102 (ENSCAFG00020008427)	SPEM2 (ENSCAFG00020008429) #33	SPEM1 (ENSCAFG00020008432) #34	NLGN2 (ENSCAFG00020008436) #35
Red fox	MODERN SPECIES	52	TRAPPC1 (ENSVVUG00000028041)	KCNAB3 (ENSVVUG00000028039)	ENSVVUG00000028036	CHD3 (ENSVVUG00000028011) #7	CYB5D1 (ENSVVUG00000028007) #9	NAA38 (ENSVVUG00000028004) #8	KDM6B (ENSVVUG00000027979) #11	DNAH2 (ENSVVUG00000027935) #12	EFNB3 (ENSVVUG00000027928) #13	WRAP53 (ENSVVUG00000027927) #14	TP53 (ENSVVUG00000027925) #15	ATP1B2 (ENSVVUG00000027923) #16	ENSVVUG00000027921 #18	SAT2 (ENSVVUG00000027919) #19	FXR2 (ENSVVUG00000027916) #20	SOX15 (ENSVVUG00000027913) #22	MPDU1 (ENSVVUG00000027907) #21	ENSVVUG00000027902	ENSVVUG00000027899	TNFSF13 (ENSVVUG00000027892) #25	TNFSF12 (ENSVVUG00000027886) #27	ENSVVUG00000027884 #27	ENSVVUG00000027883	POLR2A (ENSVVUG00000027878) #28	ENSVVUG00000027876 #29	ENSVVUG00000027874 #30	CHRNB1 (ENSVVUG00000027871)	FGF11 (ENSVVUG00000027870) #31	TMEM102 (ENSVVUG00000027868)	SPEM2 (ENSVVUG00000027867) #33	SPEM1 (ENSVVUG00000027866) #34
Felidae	ANCESTRAL SPECIES	26	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a
Panthera	ANCESTRAL SPECIES	25	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608
Panthera_a	ANCESTRAL SPECIES	28	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT01060000249269	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608
lion	MODERN SPECIES	14	TRAPPC1 (ENSPLOG00000018036)	KCNAB3 (ENSPLOG00000018084)	RNF227 (ENSPLOG00000018192)	CHD3 (ENSPLOG00000018249) #7	NAA38 (ENSPLOG00000019033) #8	CYB5D1 (ENSPLOG00000019089) #9	TMEM88 (ENSPLOG00000019141) #10	KDM6B (ENSPLOG00000019177) #11	DNAH2 (ENSPLOG00000019316) #12	EFNB3 (ENSPLOG00000020146) #13	WRAP53 (ENSPLOG00000020196) #14	TP53 (ENSPLOG00000020277) #15	ATP1B2 (ENSPLOG00000020360) #16	SHBG (ENSPLOG00000020477) #18	FXR2 (ENSPLOG00000020769) #20	SOX15 (ENSPLOG00000020846) #22	MPDU1 (ENSPLOG00000020871) #21	CD68 (ENSPLOG00000020939) #23	EIF4A1 (ENSPLOG00000020992) #24	SENP3 (ENSPLOG00000021122) #25	TNFSF13 (ENSPLOG00000021191) #26	ENSPLOG00000021283 #27	POLR2A (ENSPLOG00000021372) #28	ENSPLOG00000021544 #29	ZBTB4 (ENSPLOG00000021560) #30	ENSPLOG00000021575	ENSPLOG00000021587	FGF11 (ENSPLOG00000021605) #31	TMEM102 (ENSPLOG00000021638)	ENSPLOG00000021649	SPEM2 (ENSPLOG00000021676) #33
leopard	MODERN SPECIES	61	GUCY2D (ENSPPRG00000006843)	CNTROB (ENSPPRG00000006043)	TRAPPC1 (ENSPPRG00000002295)	KCNAB3 (ENSPPRG00000001895)	CHD3 (ENSPPRG00000000626) #7	ENSPPRG00000012321 #9	NAA38 (ENSPPRG00000012023) #8	TMEM88 (ENSPPRG00000011304) #10	EFNB3 (ENSPPRG00000023443) #13	WRAP53 (ENSPPRG00000024366) #14	TP53 (ENSPPRG00000013238) #15	ATP1B2 (ENSPPRG00000012349) #16	ENSPPRG00000011621 #18	SAT2 (ENSPPRG00000010310) #19	ENSPPRG00000009200 #20	SOX15 (ENSPPRG00000008956) #22	ENSPPRG00000008597 #21	ENSPPRG00000007983	ENSPPRG00000007910 #21	CD68 (ENSPPRG00000007544) #23	EIF4A1 (ENSPPRG00000006906) #24	SENP3 (ENSPPRG00000004329) #25	TNFSF13 (ENSPPRG00000003669) #26	TNFSF12 (ENSPPRG00000001809) #27	ENSPPRG00000001321	ENSPPRG00000000743 #28	ENSPPRG00000000344 #29	ZBTB4 (ENSPPRG00000022694) #30	CHRNB1 (ENSPPRG00000022918)	FGF11 (ENSPPRG00000023276) #31	TMEM102 (ENSPPRG00000023570)
Tiger	MODERN SPECIES	361		ENSPTIG00000019249	ALOX12B (ENSPTIG00000019556)	ALOX15B (ENSPTIG00000005281)	TRAPPC1 (ENSPTIG00000017575)	KCNAB3 (ENSPTIG00000018560)	ENSPTIG00000020407 #7	CYB5D1 (ENSPTIG00000017460) #9	ENSPTIG00000018163	WRAP53 (ENSPTIG00000016810) #14	TP53 (ENSPTIG00000020802) #15	ATP1B2 (ENSPTIG00000021917) #16	ENSPTIG00000000999 #18	SAT2 (ENSPTIG00000005757) #19	FXR2 (ENSPTIG00000007284) #20	SOX15 (ENSPTIG00000009631) #22	MPDU1 (ENSPTIG00000010234) #21	ENSPTIG00000011950 #23	EIF4A1 (ENSPTIG00000012373) #24	SENP3 (ENSPTIG00000014579) #25	TNFSF13 (ENSPTIG00000016733) #26	ENSPTIG00000020354	ENSPTIG00000005583 #28	ENSPTIG00000007434 #29	ENSPTIG00000008415 #30	CHRNB1 (ENSPTIG00000009669)	ENSPTIG00000012444 #31	ENSPTIG00000013663 #32	TMEM256 (ENSPTIG00000016291) #36	TNK1 (ENSPTIG00000016665)	TMEM95 (ENSPTIG00000018690)
Cat	MODERN SPECIES	245	KCNAB3 (ENSFCAG00000009630)	RNF227 (ENSFCAG00000042971)	CHD3 (ENSFCAG00000009629) #7	CYB5D1 (ENSFCAG00000009628) #9	NAA38 (ENSFCAG00000026713) #8	TMEM88 (ENSFCAG00000044355) #10	KDM6B (ENSFCAG00000023668) #11	DNAH2 (ENSFCAG00000009626) #12	EFNB3 (ENSFCAG00000040232) #13	WRAP53 (ENSFCAG00000009624) #14	TP53 (ENSFCAG00000009623) #15	ATP1B2 (ENSFCAG00000009622) #16	SHBG (ENSFCAG00000009621) #18	SAT2 (ENSFCAG00000037847) #19	FXR2 (ENSFCAG00000009620) #20	SOX15 (ENSFCAG00000009619) #22	MPDU1 (ENSFCAG00000009618) #21	CD68 (ENSFCAG00000035776) #23	EIF4A1 (ENSFCAG00000024897) #24	SENP3 (ENSFCAG00000009615) #25	TNFSF12 (ENSFCAG00000040186) #27	ENSFCAG00000031726 #29	ZBTB4 (ENSFCAG00000040596) #30	POLR2A (ENSFCAG00000009614) #28	FGF11 (ENSFCAG00000029958) #31	ENSFCAG00000043436	TMEM102 (ENSFCAG00000009613)	SPEM2 (ENSFCAG00000012582) #33	SPEM1 (ENSFCAG00000044575) #34	NLGN2 (ENSFCAG00000031923) #35	TMEM256 (ENSFCAG00000029899) #36
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608	ENSGT00940000164517	ENSGT00510000049558 #33
Equus	ANCESTRAL SPECIES	31	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608	ENSGT00510000049558 #33	ENSGT00510000049389 #34
Donkey	MODERN SPECIES	4	TRAPPC1 (ENSEASG00005019386)	KCNAB3 (ENSEASG00005019374)	RNF227 (ENSEASG00005019369)	CHD3 (ENSEASG00005019360) #7	ENSEASG00005036107 #8	CYB5D1 (ENSEASG00005031941) #9	TMEM88 (ENSEASG00005019354) #10	ENSEASG00005019348 #11	DNAH2 (ENSEASG00005019325) #12	EFNB3 (ENSEASG00005029987) #13	WRAP53 (ENSEASG00005019313) #14	TP53 (ENSEASG00005019310) #15	ATP1B2 (ENSEASG00005019306) #16	SAT2 (ENSEASG00005031940) #19	FXR2 (ENSEASG00005019301) #20	SOX15 (ENSEASG00005019300) #22	ENSEASG00005026250 #21	CD68 (ENSEASG00005019285) #23	EIF4A1 (ENSEASG00005019235) #24	SENP3 (ENSEASG00005019220) #25	TNFSF13 (ENSEASG00005019214) #26	TNFSF12 (ENSEASG00005035905) #27	POLR2A (ENSEASG00005019114) #28	ENSEASG00005034057 #29	ZBTB4 (ENSEASG00005034523) #30	CHRNB1 (ENSEASG00005019088)	FGF11 (ENSEASG00005024525) #31	TMEM102 (ENSEASG00005019080)	ENSEASG00005019083	SPEM2 (ENSEASG00005019077) #33	SPEM1 (ENSEASG00005027077) #34
Chiroptera	ANCESTRAL SPECIES	29	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608	ENSGT00940000164517	ENSGT00510000049558 #33
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00940000163167 #27	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00950000183608	ENSGT00940000164517	ENSGT00510000049558 #33
Greater horseshoe bat	MODERN SPECIES	13	KCNAB3 (ENSRFEG00010008905)	RNF227 (ENSRFEG00010009035)	CHD3 (ENSRFEG00010009166) #7	NAA38 (ENSRFEG00010010129) #8	CYB5D1 (ENSRFEG00010010233) #9	TMEM88 (ENSRFEG00010010263) #10	KDM6B (ENSRFEG00010010342) #11	ENSRFEG00010010696 #12	EFNB3 (ENSRFEG00010010826) #13	WRAP53 (ENSRFEG00010010871) #14	TP53 (ENSRFEG00010011010) #15	ATP1B2 (ENSRFEG00010011476) #16	SHBG (ENSRFEG00010011569) #18	SAT2 (ENSRFEG00010011849) #19	FXR2 (ENSRFEG00010011949) #20	SOX15 (ENSRFEG00010012003) #22	MPDU1 (ENSRFEG00010012043) #21	CD68 (ENSRFEG00010012245) #23	EIF4A1 (ENSRFEG00010012446) #24	SENP3 (ENSRFEG00010012722) #25	TNFSF13 (ENSRFEG00010012795) #26	TNFSF12 (ENSRFEG00010013167) #27	POLR2A (ENSRFEG00010013267) #28	ENSRFEG00010013350 #29	ZBTB4 (ENSRFEG00010013410) #30	CHRNB1 (ENSRFEG00010013455)	FGF11 (ENSRFEG00010013501) #31	TMEM102 (ENSRFEG00010013645)	ENSRFEG00010013691	SPEM3 (ENSRFEG00010013716)	SPEM2 (ENSRFEG00010013784) #33
Microbat	MODERN SPECIES	1616															FXR2 (ENSMLUG00000003438) #20	SOX15 (ENSMLUG00000003435) #22	MPDU1 (ENSMLUG00000003430) #21	ENSMLUG00000003420	EIF4A1 (ENSMLUG00000003415) #24	SENP3 (ENSMLUG00000003409) #25	TNFSF13 (ENSMLUG00000003401) #26	TNFSF12 (ENSMLUG00000023637) #27	ENSMLUG00000028461	POLR2A (ENSMLUG00000009088) #28	ZBTB4 (ENSMLUG00000009961) #30	CHRNB1 (ENSMLUG00000009921)	FGF11 (ENSMLUG00000009905) #31	PLSCR3 (ENSMLUG00000013303) #37	TNK1 (ENSMLUG00000013295)	TMEM95 (ENSMLUG00000013285)	KCTD11 (ENSMLUG00000029294)
Megabat	MODERN SPECIES	1723	KCNAB3 (ENSPVAG00000016350)	ENSPVAG00000016349	CHD3 (ENSPVAG00000016344) #7	CYB5D1 (ENSPVAG00000016343) #9	NAA38 (ENSPVAG00000016342) #8	ENSPVAG00000016341	KDM6B (ENSPVAG00000016339) #11	DNAH2 (ENSPVAG00000016329) #12	EFNB3 (ENSPVAG00000016328) #13	WRAP53 (ENSPVAG00000016324) #14	TP53 (ENSPVAG00000016317) #15	ATP1B2 (ENSPVAG00000016314) #16	SHBG (ENSPVAG00000016310) #18	SAT2 (ENSPVAG00000016309) #19	FXR2 (ENSPVAG00000016306) #20	SOX15 (ENSPVAG00000016305) #22	ENSPVAG00000016301	CD68 (ENSPVAG00000016300) #23	EIF4A1 (ENSPVAG00000016297) #24	SENP3 (ENSPVAG00000016296) #25	ENSPVAG00000016294 #26
Atlantogenata	ANCESTRAL SPECIES	37	ENSGT00940000159306	ENSGT00390000002475	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34	ENSGT00940000160598 #35	ENSGT00390000000334 #36
Afrotheria	ANCESTRAL SPECIES	27	ENSGT00940000159306	ENSGT00940000166612	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34	ENSGT00940000160598 #35	ENSGT00390000000334 #36
Afrotheria_a	ANCESTRAL SPECIES	27	ENSGT00940000159306	ENSGT00940000166612	ENSGT00940000158001 #7	ENSGT00440000037582 #9	ENSGT00390000018418 #8	ENSGT00940000162021 #10	ENSGT00940000160414 #11	ENSGT00940000157623 #12	ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #33	ENSGT00510000049389 #34	ENSGT00940000160598 #35	ENSGT00390000000334 #36
Elephant	MODERN SPECIES	414	SHBG (ENSLAFG00000000994) #18	ENSLAFG00000029792	FXR2 (ENSLAFG00000001114) #20	MPDU1 (ENSLAFG00000001111) #21	CD68 (ENSLAFG00000001110) #23	EIF4A1 (ENSLAFG00000001107) #24	SENP3 (ENSLAFG00000028537) #25	TNFSF13 (ENSLAFG00000004335) #26	POLR2A (ENSLAFG00000008626) #28	ENSLAFG00000031060 #29	ZBTB4 (ENSLAFG00000015214) #30	CHRNB1 (ENSLAFG00000023001)	FGF11 (ENSLAFG00000018626) #31	TMEM102 (ENSLAFG00000028785)	SPEM2 (ENSLAFG00000031045) #33	SOX15 (ENSLAFG00000001112) #22	SPEM1 (ENSLAFG00000030940) #34	NLGN2 (ENSLAFG00000014933) #35	TMEM256 (ENSLAFG00000032593) #36	PLSCR3 (ENSLAFG00000031015) #37	TNK1 (ENSLAFG00000010519)	TMEM95 (ENSLAFG00000030785)	KCTD11 (ENSLAFG00000020557)	ACAP1 (ENSLAFG00000014924)	ENSLAFG00000030888	NEURL4 (ENSLAFG00000030118)	GPS2 (ENSLAFG00000020547)	ENSLAFG00000026475	YBX2 (ENSLAFG00000014006)	SLC2A4 (ENSLAFG00000014001)	ELP5 (ENSLAFG00000000748)
Hyrax	MODERN SPECIES	4442													ENSPCAG00000013334 #18	SAT2 (ENSPCAG00000013271) #19	FXR2 (ENSPCAG00000013184) #20	SOX15 (ENSPCAG00000013154) #22	MPDU1 (ENSPCAG00000013065) #21	CD68 (ENSPCAG00000013019) #23	EIF4A1 (ENSPCAG00000012966) #24	SENP3 (ENSPCAG00000012906) #25	ENSPCAG00000012847 #26
Tenrec	MODERN SPECIES	2583															FXR2 (ENSETEG00000018613) #20	SOX15 (ENSETEG00000018611) #22	MPDU1 (ENSETEG00000018609) #21
Xenarthra	ANCESTRAL SPECIES	105									ENSGT00940000160323.b #13	ENSGT00390000010169 #14	ENSGT00950000183153.c.a #15	ENSGT01030000234579.A.a #16	ENSGT00940000154035.a #18	ENSGT00950000183121.b.a #19	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00950000182899.C.b #23	ENSGT00940000153889.e.a.b #24	ENSGT00940000156309.A #25	ENSGT00940000161488 #26	ENSGT00930000151033 #28	ENSGT00940000153249.b.c #29	ENSGT00940000161268 #30	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000160598 #35	ENSGT00390000000334 #36	ENSGT00940000161755 #37	ENSGT00940000162159
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2560								ENSDNOG00000049478	EFNB3 (ENSDNOG00000036893) #13	WRAP53 (ENSDNOG00000024614) #14	TP53 (ENSDNOG00000005252) #15	ATP1B2 (ENSDNOG00000037565) #16	SHBG (ENSDNOG00000025591) #18	SAT2 (ENSDNOG00000047965) #19	FXR2 (ENSDNOG00000001047) #20	ENSDNOG00000004931 #22	MPDU1 (ENSDNOG00000040929) #21	CD68 (ENSDNOG00000019028) #23	EIF4A1 (ENSDNOG00000044619) #24	SENP3 (ENSDNOG00000046769) #25	ENSDNOG00000015264 #26	POLR2A (ENSDNOG00000016482) #28	ENSDNOG00000030841 #29	ZBTB4 (ENSDNOG00000034417) #30	CHRNB1 (ENSDNOG00000039322)	FGF11 (ENSDNOG00000039158) #31	TMEM102 (ENSDNOG00000039072)	ENSDNOG00000048274 #35	TMEM256 (ENSDNOG00000045750) #36	PLSCR3 (ENSDNOG00000040577) #37	TNK1 (ENSDNOG00000032132)
Armadillo	MODERN SPECIES	1291						WDTC1 (ENSDNOG00000001232)	TMEM222 (ENSDNOG00000043003)	SYTL1 (ENSDNOG00000009697)	MAP3K6 (ENSDNOG00000009722)	FCN3 (ENSDNOG00000031654)	CD164L2 (ENSDNOG00000039635)	GPR3 (ENSDNOG00000024172)	WASF2 (ENSDNOG00000034536)	AHDC1 (ENSDNOG00000038844)	FGR (ENSDNOG00000014797)	ENSDNOG00000034433 #22	FAM76A (ENSDNOG00000049213)	STX12 (ENSDNOG00000049359)	PPP1R8 (ENSDNOG00000033057)	THEMIS2 (ENSDNOG00000013968)	RPA2 (ENSDNOG00000023660)	SMPDL3B (ENSDNOG00000032579)	XKR8 (ENSDNOG00000032960)	EYA3 (ENSDNOG00000044648)	PTAFR (ENSDNOG00000044017)	ENSDNOG00000042785	ENSDNOG00000045464	ENSDNOG00000038753	SESN2 (ENSDNOG00000017933)	MED18 (ENSDNOG00000012531)	ENSDNOG00000035347
Marsupialia	ANCESTRAL SPECIES	176																ENSGT00940000162099 #22	ENSGT00920000150151
Marsupialia_b	ANCESTRAL SPECIES	138																ENSGT00940000162099 #22	ENSGT00920000150151
Diprotodontia	ANCESTRAL SPECIES	199																ENSGT00940000162099 #22	ENSGT00920000150151
Wallaby	MODERN SPECIES	3509																ENSMEUG00000015665 #22	ENSMEUG00000015647
Platypus	MODERN SPECIES	88	KCNAB3 (ENSOANG00000011684)	RNF227 (ENSOANG00000047566)	ENSOANG00000040863 #7	ENSOANG00000048406 #7	ENSOANG00000051342 #9	NAA38 (ENSOANG00000050971) #8	ENSOANG00000049653 #10	ENSOANG00000045211 #11	EFNB3 (ENSOANG00000036033) #13	WRAP53 (ENSOANG00000008865) #14	ENSOANG00000050103 #15	ATP1B2 (ENSOANG00000044182) #16	ENSOANG00000038617	SAT2 (ENSOANG00000048805) #19	FXR2 (ENSOANG00000036936) #20	ENSOANG00000048007 #22	MPDU1 (ENSOANG00000042200) #21	ENSOANG00000037792	EIF4A1 (ENSOANG00000050686) #24	ENSOANG00000047493 #26	ENSOANG00000003303 #28	ENSOANG00000048789 #29	ENSOANG00000036766 #30	ENSOANG00000049743	ENSOANG00000007203	ENSOANG00000040838 #31	ENSOANG00000002509 #31	NLGN2 (ENSOANG00000038162) #35	TMEM256 (ENSOANG00000048373) #36	PLSCR3 (ENSOANG00000044513) #37	TNK1 (ENSOANG00000042604)
Sauria	ANCESTRAL SPECIES	59						ENSGT01030000234598.a.a.b	ENSGT00940000164913	ENSGT00560000077278.a	ENSGT00940000153993.A	ENSGT00390000004198	ENSGT00940000161400	ENSGT00890000139453.a	ENSGT00940000161071	ENSGT00940000166370	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000163250.A	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT01030000236262	ENSGT00940000156309.B ##25	ENSGT00940000162036	ENSGT00940000161727	ENSGT00940000157956	ENSGT00940000158535	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000160598 #35
Archelosauria	ANCESTRAL SPECIES	61															ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000163250.A	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT01030000236262	ENSGT00940000156309.B ##25	ENSGT01100000264186	ENSGT00960000191608	ENSGT00940000162799	ENSGT00940000161727	ENSGT00940000157956	ENSGT00940000158535	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31
Cryptodira	ANCESTRAL SPECIES	76													ENSGT00940000162936	ENSGT00940000159400	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000163250.A	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT00940000156309.B ##25	ENSGT00950000183121.a.b ##19	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000160598 #35	ENSGT00390000000334 #36	ENSGT00940000161755 #37	ENSGT01100000264186	ENSGT00960000191608
Testudinoidea	ANCESTRAL SPECIES	60													ENSGT00940000162936	ENSGT00940000159400	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000163250.A	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT00940000156309.B ##25	ENSGT00950000183121.a.b ##19	ENSGT00950000183121.a.a.b ##19	ENSGT00950000183121.a.a.a.b ##19	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00940000160598 #35	ENSGT00390000000334 #36	ENSGT00940000161755 #37	ENSGT01100000264186	ENSGT00960000191608
Testudinidae	ANCESTRAL SPECIES	81													ENSGT00940000162936	ENSGT00940000159400	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000163250.A	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT00940000156309.B ##25	ENSGT00950000183121.a.b ##19	ENSGT00950000183121.a.a.b ##19	ENSGT00950000183121.a.a.a.b ##19	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT00940000160598 #35	ENSGT00390000000334 #36	ENSGT00940000161755 #37	ENSGT01100000264186	ENSGT00960000191608
Goode s thornscrub tortoise	MODERN SPECIES	199						ENSGEVG00005015768	ENSGEVG00005015885	EPHB4 (ENSGEVG00005015938)	ENSGEVG00005016156	SRRT (ENSGEVG00005016189)	ENSGEVG00005016271	ENSGEVG00005016316	UFSP1 (ENSGEVG00005016377)	SLC12A9 (ENSGEVG00005016454)	FXR2 (ENSGEVG00005016830) #20	SOX15 (ENSGEVG00005016866) #22	MPDU1 (ENSGEVG00005016892) #21	ENSGEVG00005016911	CD68 (ENSGEVG00005016953) #23	EIF4A1 (ENSGEVG00005016977) #24	ENSGEVG00005017121 ##25	ENSGEVG00005017140 ##19	ENSGEVG00005017161 ##19	ENSGEVG00005017184	ENSGEVG00005017206	ENSGEVG00005017230	CHRNB1 (ENSGEVG00005017249)	FGF11 (ENSGEVG00005017284) #31
Emydidae	ANCESTRAL SPECIES	129															ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00990000209386	ENSGT00990000208894	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT00940000156309.B ##25	ENSGT00950000183121.a.b ##19	ENSGT00950000183121.a.a.b ##19	ENSGT01010000225782	ENSGT00940000158661
Three-toed box turtle	MODERN SPECIES	200			KIF1C (ENSTMTG00000020695)	PCOLCE (ENSTMTG00000020765)	ENSTMTG00000020782	ENSTMTG00000020788	AGFG2 (ENSTMTG00000020799)	NYAP1 (ENSTMTG00000020814)	PPP1R35 (ENSTMTG00000020820)	MEPCE (ENSTMTG00000020825)	ENSTMTG00000020838	GNB2 (ENSTMTG00000020862)	ACTL6B (ENSTMTG00000020870)	ENSTMTG00000020916	FXR2 (ENSTMTG00000020924) #20	SOX15 (ENSTMTG00000020945) #22	ENSTMTG00000020947	ENSTMTG00000020950	CD68 (ENSTMTG00000020956) #23	EIF4A1 (ENSTMTG00000020960) #24	ENSTMTG00000020983 ##25	ENSTMTG00000020996 ##19	ENSTMTG00000021006 ##19	ENSTMTG00000021011	ENSTMTG00000021014
Lepidosauria	ANCESTRAL SPECIES	122								ENSGT00510000048483	ENSGT00390000017226	ENSGT01030000234598.a.a.b	ENSGT00940000155531.a.b	ENSGT00560000077278.a	ENSGT00940000153993.A	ENSGT00390000004198	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000163250.A	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT01030000236262	ENSGT00940000156309.B ##25	ENSGT01030000234567.B.b.cb.b	ENSGT00940000162036	ENSGT00940000161727	ENSGT00940000157956	ENSGT00940000158535
Episquamata	ANCESTRAL SPECIES	31					ENSGT00940000159845	ENSGT01000000214413.b.b	ENSGT00940000160860	ENSGT00510000048483	ENSGT00390000017226	ENSGT01030000234598.a.a.b	ENSGT00940000155531.a.b	ENSGT00560000077278.a	ENSGT00940000153993.A	ENSGT00390000004198	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000163250.A.d	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT01030000236262	ENSGT00940000156309.B ##25	ENSGT01030000234567.B.b.cb.b	ENSGT00940000162036	ENSGT00940000161727.c.a	ENSGT00940000157956	ENSGT00940000158535
Laterata	ANCESTRAL SPECIES	26	ENSGT00940000162936	ENSGT00940000159400	ENSGT00940000159845	ENSGT01000000214413.b.b	ENSGT00940000160860	ENSGT00510000048483	ENSGT00390000017226	ENSGT01030000234598.a.a.b	ENSGT00940000155531.a.b	ENSGT00560000077278.a	ENSGT00940000153993.A	ENSGT00390000004198	ENSGT00940000160057	ENSGT00990000205849	ENSGT00950000183189.a.a #20	ENSGT00940000162099 #22	ENSGT00940000153916.A #21	ENSGT00940000163250.A.d	ENSGT00950000182899.C.b #23	ENSGT00940000153889 #24	ENSGT00940000156309.B ##25	ENSGT00940000161727.c.a.b	ENSGT00940000162036	ENSGT00950000183121.a.b ##19	ENSGT00950000183121.a.a.a.b ##19	ENSGT00940000158661	ENSGT00940000158058 #31	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000160598 #35	ENSGT00390000000334 #36	ENSGT00940000154435.z
Common wall lizard	MODERN SPECIES	4	GIGYF1 (ENSPMRG00000012229)	GNB2 (ENSPMRG00000012223)	ACTL6B (ENSPMRG00000012219)	ENSPMRG00000012213	POP7 (ENSPMRG00000012210)	TFR2 (ENSPMRG00000012193)	ENSPMRG00000012175	ENSPMRG00000012166	MEPCE (ENSPMRG00000012163)	ENSPMRG00000012161	ENSPMRG00000012159	ENSPMRG00000012155	EPHB4 (ENSPMRG00000012153)	ENSPMRG00000012145	FXR2 (ENSPMRG00000012121) #20	SOX15 (ENSPMRG00000012111) #22	MPDU1 (ENSPMRG00000012106) #21	ENSPMRG00000012103	CD68 (ENSPMRG00000012097) #23	EIF4A1 (ENSPMRG00000012087) #24	ENSPMRG00000012075 ##25	ENSPMRG00000012050	ENSPMRG00000012045	ENSPMRG00000012043	ENSPMRG00000012039	ENSPMRG00000012034 ##19	ENSPMRG00000012027 ##19	ENSPMRG00000012025 ##19	CHRNB1 (ENSPMRG00000012018)	FGF11 (ENSPMRG00000012011) #31	TMEM102 (ENSPMRG00000012009)
Anura	ANCESTRAL SPECIES																	ENSGT00940000162099 #22
Frog	MODERN SPECIES	3	ENSXETG00000047173	sat2 (ENSXETG00000036942) #19	ENSXETG00000046182 ##19	ENSXETG00000047389 #31	tmem102 (ENSXETG00000039616) #32	ENSXETG00000045775	nlgn2 (ENSXETG00000044356) #35	ENSXETG00000042866	senp3 (ENSXETG00000043732) ##25	eif4a1 (ENSXETG00000020123) #24	omp (ENSXETG00000020127) #23	ENSXETG00000038530	ENSXETG00000042560	mpdu1 (ENSXETG00000049310) #21	ENSXETG00000044372	sox15 (ENSXETG00000049010) #22	ephb4 (ENSXETG00000011170)	ENSXETG00000047355	ENSXETG00000047516	mepce (ENSXETG00000044495)	zcwpw1 (ENSXETG00000046833)	ENSXETG00000046725	tfr2 (ENSXETG00000043275)	actl6b (ENSXETG00000046681)	ENSXETG00000031612	ENSXETG00000043682	gigyf1 (ENSXETG00000018415)	ENSXETG00000047438	clcnkb (ENSXETG00000046577)	epo (ENSXETG00000032905)	slc12a9 (ENSXETG00000018392)