Bilateria	DUPLICATION
Bilateria	ANCESTRAL SPECIES																	ENSGT00950000183082.b #22
Chordata	ANCESTRAL SPECIES																	ENSGT00950000183082.b #22
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b #22
Gnathostomata	ANCESTRAL SPECIES	617													ENSGT00940000161833	ENSGT00940000165452.a	ENSGT00940000157556 #21	ENSGT00950000183082.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24
Euteleostomi	DUPLICATION
Euteleostomi	ANCESTRAL SPECIES	429											ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25
Sarcopterygii	ANCESTRAL SPECIES	157						ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000161036.B	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049872 #34	ENSGT00390000010434.b #35
Tetrapoda	ANCESTRAL SPECIES	39						ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000161036.B	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Amniota	ANCESTRAL SPECIES	10				ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000161036.B	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Mammalia	ANCESTRAL SPECIES	14	ENSGT00740000115593	ENSGT00940000155525	ENSGT00900000142007	ENSGT00940000158658	ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000161036.B	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT01000000220768	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35
Theria	ANCESTRAL SPECIES	21							ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT01000000220768	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Eutheria	ANCESTRAL SPECIES	13	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Primates	ANCESTRAL SPECIES	16	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Hominidae	ANCESTRAL SPECIES	13	ENSGT00940000160584 #7	ENSGT00940000154908.j #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00940000160584 #7	ENSGT00940000154908.j #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00910000147501	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00940000160584 #7	ENSGT00940000154908.j #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00910000147501	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35
Human	MODERN SPECIES	1	WNT8B (ENSG00000075290) #7	SCD (ENSG00000099194) #8	PKD2L1 (ENSG00000107593) #9	BLOC1S2 (ENSG00000196072) #10	CWF19L1 (ENSG00000095485) #11	CHUK (ENSG00000213341) #12	ERLIN1 (ENSG00000107566) #13	CPN1 (ENSG00000120054) #14	DNMBP (ENSG00000107554) #15	ABCC2 (ENSG00000023839) #16	COX15 (ENSG00000014919) #17	CUTC (ENSG00000119929) #18	ENTPD7 (ENSG00000198018) #19	SLC25A28 (ENSG00000155287) #20	NKX2-3 (ENSG00000119919) #21	GOT1 (ENSG00000120053) #22	CNNM1 (ENSG00000119946) #23	HPSE2 (ENSG00000172987) #24	HPS1 (ENSG00000107521) #25	PYROXD2 (ENSG00000119943) #26	LOXL4 (ENSG00000138131) #27	R3HCC1L (ENSG00000166024) #28	CRTAC1 (ENSG00000095713) #29	GOLGA7B (ENSG00000155265) #30	SFRP5 (ENSG00000120057) #31	ZFYVE27 (ENSG00000155256) #32	MARVELD1 (ENSG00000155254) #33	AVPI1 (ENSG00000119986) #34	PI4K2A (ENSG00000155252) #35	MORN4 (ENSG00000171160) #36	C10orf62 (ENSG00000203942) #37
Pan	ANCESTRAL SPECIES	16	ENSGT00940000160584 #7	ENSGT00940000154908.j #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00940000154714.v.e.a	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00910000147501	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34
Chimpanzee	MODERN SPECIES	1	WNT8B (ENSPTRG00000002849) #7	SCD (ENSPTRG00000002847) #8	PKD2L1 (ENSPTRG00000002845) #9	BLOC1S2 (ENSPTRG00000038697) #10	CWF19L1 (ENSPTRG00000002843) #11	CHUK (ENSPTRG00000033948) #12	ERLIN1 (ENSPTRG00000002841) #13	CPN1 (ENSPTRG00000045585) #14	DNMBP (ENSPTRG00000049744) #15	ABCC2 (ENSPTRG00000049872) #16	CUTC (ENSPTRG00000002836) #18	COX15 (ENSPTRG00000002835) #17	ENTPD7 (ENSPTRG00000002832) #19	SLC25A28 (ENSPTRG00000002831) #20	NKX2-3 (ENSPTRG00000002830) #21	GOT1 (ENSPTRG00000002829) #22	CNNM1 (ENSPTRG00000002828) #23	ENSPTRG00000050968	HPSE2 (ENSPTRG00000002826) #24	HPS1 (ENSPTRG00000002825) #25	ENSPTRG00000045214	PYROXD2 (ENSPTRG00000002824) #26	LOXL4 (ENSPTRG00000002823) #27	R3HCC1L (ENSPTRG00000002822) #28	ENSPTRG00000042728	CRTAC1 (ENSPTRG00000002821) #29	GOLGA7B (ENSPTRG00000045507) #30	SFRP5 (ENSPTRG00000045244) #31	ZFYVE27 (ENSPTRG00000002818) #32	MARVELD1 (ENSPTRG00000051550) #33	AVPI1 (ENSPTRG00000002816) #34
Bonobo	MODERN SPECIES	1	WNT8B (ENSPPAG00000039871) #7	SCD (ENSPPAG00000029861) #8	PKD2L1 (ENSPPAG00000027774) #9	BLOC1S2 (ENSPPAG00000043419) #10	CWF19L1 (ENSPPAG00000031948) #11	CHUK (ENSPPAG00000037851) #12	ERLIN1 (ENSPPAG00000035564) #13	CPN1 (ENSPPAG00000043340) #14	DNMBP (ENSPPAG00000031406) #15	ABCC2 (ENSPPAG00000040849) #16	CUTC (ENSPPAG00000033196) #18	COX15 (ENSPPAG00000002116) #17	ENTPD7 (ENSPPAG00000035846) #19	SLC25A28 (ENSPPAG00000037976) #20	ENSPPAG00000035777 #21	GOT1 (ENSPPAG00000042571) #22	CNNM1 (ENSPPAG00000024282) #23	ENSPPAG00000030090	HPSE2 (ENSPPAG00000030241) #24	HPS1 (ENSPPAG00000033115) #25	ENSPPAG00000037622	PYROXD2 (ENSPPAG00000034734) #26	LOXL4 (ENSPPAG00000030338) #27	R3HCC1L (ENSPPAG00000039950) #28	ENSPPAG00000031192	CRTAC1 (ENSPPAG00000042754) #29	GOLGA7B (ENSPPAG00000040315) #30	SFRP5 (ENSPPAG00000031585) #31	ZFYVE27 (ENSPPAG00000029291) #32	AVPI1 (ENSPPAG00000033222) #34	ENSPPAG00000030161 #36
Gorilla	MODERN SPECIES	1	WNT8B (ENSGGOG00000014634) #7	SCD (ENSGGOG00000001098) #8	PKD2L1 (ENSGGOG00000001841) #9	BLOC1S2 (ENSGGOG00000025362) #10	ENSGGOG00000005525	ENSGGOG00000008996 #12	ERLIN1 (ENSGGOG00000010561) #13	CPN1 (ENSGGOG00000014771) #14	DNMBP (ENSGGOG00000016481) #15	ABCC2 (ENSGGOG00000002275) #16	CUTC (ENSGGOG00000043674) #18	COX15 (ENSGGOG00000010577) #17	ENTPD7 (ENSGGOG00000014030) #19	SLC25A28 (ENSGGOG00000000150) #20	NKX2-3 (ENSGGOG00000013605) #21	GOT1 (ENSGGOG00000002550) #22	CNNM1 (ENSGGOG00000002546) #23	ENSGGOG00000043172	ENSGGOG00000037859	HPSE2 (ENSGGOG00000013772) #24	HPS1 (ENSGGOG00000002508) #25	ENSGGOG00000043397	PYROXD2 (ENSGGOG00000002504) #26	LOXL4 (ENSGGOG00000004798) #27	R3HCC1L (ENSGGOG00000004792) #28	ENSGGOG00000041605	CRTAC1 (ENSGGOG00000016011) #29	GOLGA7B (ENSGGOG00000016005) #30	SFRP5 (ENSGGOG00000012574) #31	ZFYVE27 (ENSGGOG00000024663) #32	MARVELD1 (ENSGGOG00000027335) #33
Orangutan	MODERN SPECIES	1	WNT8B (ENSPPYG00000002568) #7	SCD (ENSPPYG00000002566) #8	PKD2L1 (ENSPPYG00000002565) #9	BLOC1S2 (ENSPPYG00000033265) #10	CWF19L1 (ENSPPYG00000002563) #11	CHUK (ENSPPYG00000002562) #12	ERLIN1 (ENSPPYG00000002560) #13	CPN1 (ENSPPYG00000029420) #14	DNMBP (ENSPPYG00000002559) #15	ABCC2 (ENSPPYG00000002558) #16	CUTC (ENSPPYG00000002557) #18	COX15 (ENSPPYG00000002556) #17	ENTPD7 (ENSPPYG00000002555) #19	SLC25A28 (ENSPPYG00000002554) #20	NKX2-3 (ENSPPYG00000002553) #21	GOT1 (ENSPPYG00000002552) #22	CNNM1 (ENSPPYG00000002551) #23	HPSE2 (ENSPPYG00000002550) #24	HPS1 (ENSPPYG00000002548) #25	PYROXD2 (ENSPPYG00000002547) #26	LOXL4 (ENSPPYG00000002546) #27	R3HCC1L (ENSPPYG00000002545) #28	CRTAC1 (ENSPPYG00000002543) #29	GOLGA7B (ENSPPYG00000002542) #30	SFRP5 (ENSPPYG00000034062) #31	ZFYVE27 (ENSPPYG00000002540) #32	MARVELD1 (ENSPPYG00000038510) #33	AVPI1 (ENSPPYG00000002539) #34	PI4K2A (ENSPPYG00000002538) #35	MORN4 (ENSPPYG00000031901) #36	HOGA1 (ENSPPYG00000002536)
Gibbon	MODERN SPECIES	18	WNT8B (ENSNLEG00000014764) #7	SCD (ENSNLEG00000014754) #8	PKD2L1 (ENSNLEG00000014748) #9	ENSNLEG00000033207	CWF19L1 (ENSNLEG00000014744) #11	CHUK (ENSNLEG00000014739) #12	ERLIN1 (ENSNLEG00000014724) #13	CPN1 (ENSNLEG00000014719) #14	DNMBP (ENSNLEG00000014697) #15	ABCC2 (ENSNLEG00000014650) #16	CUTC (ENSNLEG00000033562) #18	COX15 (ENSNLEG00000034626) #17	ENTPD7 (ENSNLEG00000014604) #19	ENSNLEG00000029449 #20	NKX2-3 (ENSNLEG00000027207) #21	GOT1 (ENSNLEG00000014567) #22	CNNM1 (ENSNLEG00000014538) #23	HPSE2 (ENSNLEG00000014531) #24	HPS1 (ENSNLEG00000014448) #25	PYROXD2 (ENSNLEG00000014414) #26	LOXL4 (ENSNLEG00000014379) #27	R3HCC1L (ENSNLEG00000014364) #28	CRTAC1 (ENSNLEG00000014328) #29	ENSNLEG00000035121	GOLGA7B (ENSNLEG00000014326) #30	SFRP5 (ENSNLEG00000014325) #31	ZFYVE27 (ENSNLEG00000014267) #32	AVPI1 (ENSNLEG00000014255) #34	PI4K2A (ENSNLEG00000014236) #35	MORN4 (ENSNLEG00000014248) #36	ANKRD2 (ENSNLEG00000014209)
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00910000147853	ENSGT00940000154908.g #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00910000147853	ENSGT00940000154908.g #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Vervet Monkey	MODERN SPECIES	28	SCD (ENSCSAG00000005611) #8	PKD2L1 (ENSCSAG00000005629) #9	BLOC1S2 (ENSCSAG00000005639) #10	ENSCSAG00000018449	CWF19L1 (ENSCSAG00000005656) #11	CHUK (ENSCSAG00000005664) #12	ERLIN1 (ENSCSAG00000005667) #13	CPN1 (ENSCSAG00000005670) #14	DNMBP (ENSCSAG00000005674) #15	ABCC2 (ENSCSAG00000005698) #16	CUTC (ENSCSAG00000005709) #18	COX15 (ENSCSAG00000005712) #17	ENTPD7 (ENSCSAG00000005714) #19	SLC25A28 (ENSCSAG00000005717) #20	NKX2-3 (ENSCSAG00000005719) #21	GOT1 (ENSCSAG00000005721) #22	ENSCSAG00000005724 #23	ENSCSAG00000005727 #24	HPS1 (ENSCSAG00000005768) #25	PYROXD2 (ENSCSAG00000005790) #26	LOXL4 (ENSCSAG00000005801) #27	R3HCC1L (ENSCSAG00000005808) #28	CRTAC1 (ENSCSAG00000005817) #29	GOLGA7B (ENSCSAG00000005820) #30	SFRP5 (ENSCSAG00000005821) #31	ZFYVE27 (ENSCSAG00000005827) #32	MARVELD1 (ENSCSAG00000018448) #33	AVPI1 (ENSCSAG00000005840) #34	PI4K2A (ENSCSAG00000005842) #35	MORN4 (ENSCSAG00000005847) #36	HOGA1 (ENSCSAG00000005851)
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00910000147853	ENSGT00940000154908.g #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000.o.a #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Macaca	ANCESTRAL SPECIES	11	ENSGT00910000147853	ENSGT00940000154908.g #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000.o.a #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Pig-tailed macaque	MODERN SPECIES	550	PKD2L1 (ENSMNEG00000030013) #9	BLOC1S2 (ENSMNEG00000034276) #10	ENSMNEG00000037598	ENSMNEG00000028051 #11	CHUK (ENSMNEG00000030565) #12	ERLIN1 (ENSMNEG00000041977) #13	CPN1 (ENSMNEG00000041677) #14	DNMBP (ENSMNEG00000039644) #15	ABCC2 (ENSMNEG00000038501) #16	CUTC (ENSMNEG00000031615) #18	COX15 (ENSMNEG00000041146) #17	ENTPD7 (ENSMNEG00000041235) #19	SLC25A28 (ENSMNEG00000027423) #20	ENSMNEG00000033853	NKX2-3 (ENSMNEG00000033053) #21	GOT1 (ENSMNEG00000030700) #22	CNNM1 (ENSMNEG00000033068) #23	HPSE2 (ENSMNEG00000028562) #24	HPS1 (ENSMNEG00000045397) #25	PYROXD2 (ENSMNEG00000040531) #26	LOXL4 (ENSMNEG00000030985) #27	R3HCC1L (ENSMNEG00000037890) #28	CRTAC1 (ENSMNEG00000035544) #29	ENSMNEG00000001433	GOLGA7B (ENSMNEG00000033947) #30	SFRP5 (ENSMNEG00000043178) #31	ZFYVE27 (ENSMNEG00000039230) #32	MARVELD1 (ENSMNEG00000009162) #33	AVPI1 (ENSMNEG00000032294) #34	PI4K2A (ENSMNEG00000020019) #35	MORN4 (ENSMNEG00000035432) #36
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000154908.g #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000.o.a #11	ENSGT00950000182937.A.a #12	ENSGT00980000200803	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00910000147157	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Crab-eating macaque	MODERN SPECIES	19	ENSMFAG00000040755 #8	PKD2L1 (ENSMFAG00000030987) #9	ENSMFAG00000031202 #11	CHUK (ENSMFAG00000000426) #12	ENSMFAG00000062447	ERLIN1 (ENSMFAG00000042046) #13	ENSMFAG00000041054 #10	CPN1 (ENSMFAG00000007369) #14	DNMBP (ENSMFAG00000002036) #15	ABCC2 (ENSMFAG00000042907) #16	CUTC (ENSMFAG00000031857) #18	COX15 (ENSMFAG00000044256) #17	ENTPD7 (ENSMFAG00000038377) #19	SLC25A28 (ENSMFAG00000003371) #20	NKX2-3 (ENSMFAG00000044388) #21	GOT1 (ENSMFAG00000030230) #22	ENSMFAG00000046376 #23	HPSE2 (ENSMFAG00000036760) #24	HPS1 (ENSMFAG00000036329) #25	PYROXD2 (ENSMFAG00000034078) #26	LOXL4 (ENSMFAG00000036533) #27	R3HCC1L (ENSMFAG00000036084) #28	ENSMFAG00000060607	CRTAC1 (ENSMFAG00000007568) #29	GOLGA7B (ENSMFAG00000002194) #30	SFRP5 (ENSMFAG00000037089) #31	ZFYVE27 (ENSMFAG00000031815) #32	AVPI1 (ENSMFAG00000043548) #34	PI4K2A (ENSMFAG00000003191) #35	MORN4 (ENSMFAG00000000472) #36	HOGA1 (ENSMFAG00000061572)
Rhesus	MODERN SPECIES	19	CWF19L1 (ENSMMUG00000018472) #11	CHUK (ENSMMUG00000018476) #12	ENSMMUG00000064203	ERLIN1 (ENSMMUG00000018470) #13	BLOC1S2 (ENSMMUG00000061808) #10	CPN1 (ENSMMUG00000018755) #14	DNMBP (ENSMMUG00000023765) #15	ENSMMUG00000030508	ABCC2 (ENSMMUG00000023764) #16	CUTC (ENSMMUG00000061918) #18	COX15 (ENSMMUG00000023762) #17	ENTPD7 (ENSMMUG00000023761) #19	SLC25A28 (ENSMMUG00000023760) #20	NKX2-3 (ENSMMUG00000018270) #21	ENSMMUG00000056041	GOT1 (ENSMMUG00000010356) #22	CNNM1 (ENSMMUG00000010357) #23	ENSMMUG00000059304	HPSE2 (ENSMMUG00000020605) #24	HPS1 (ENSMMUG00000020604) #25	PYROXD2 (ENSMMUG00000020603) #26	LOXL4 (ENSMMUG00000051439) #27	R3HCC1L (ENSMMUG00000010281) #28	ENSMMUG00000052648	GOLGA7B (ENSMMUG00000056243) #30	CRTAC1 (ENSMMUG00000018154) #29	SFRP5 (ENSMMUG00000064002) #31	ZFYVE27 (ENSMMUG00000015503) #32	MARVELD1 (ENSMMUG00000064106) #33	AVPI1 (ENSMMUG00000052153) #34	MORN4 (ENSMMUG00000020034) #36
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000160584 #7	ENSGT00940000154908.g #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000.o.a #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Olive baboon	MODERN SPECIES	2	SCD (ENSPANG00000050775) #8	PKD2L1 (ENSPANG00000021208) #9	BLOC1S2 (ENSPANG00000041274) #10	ENSPANG00000021205 #11	CHUK (ENSPANG00000021197) #12	ERLIN1 (ENSPANG00000021228) #13	CPN1 (ENSPANG00000039263) #14	DNMBP (ENSPANG00000021232) #15	ABCC2 (ENSPANG00000021230) #16	CUTC (ENSPANG00000021229) #18	COX15 (ENSPANG00000021260) #17	ENTPD7 (ENSPANG00000021258) #19	SLC25A28 (ENSPANG00000033003) #20	NKX2-3 (ENSPANG00000021255) #21	ENSPANG00000042572	GOT1 (ENSPANG00000021288) #22	CNNM1 (ENSPANG00000021286) #23	HPSE2 (ENSPANG00000021283) #24	HPS1 (ENSPANG00000021281) #25	LOXL4 (ENSPANG00000021302) #27	R3HCC1L (ENSPANG00000021301) #28	CRTAC1 (ENSPANG00000021299) #29	GOLGA7B (ENSPANG00000021297) #30	SFRP5 (ENSPANG00000021296) #31	ZFYVE27 (ENSPANG00000021295) #32	MARVELD1 (ENSPANG00000021294) #33	AVPI1 (ENSPANG00000021293) #34	PI4K2A (ENSPANG00000021292) #35	MORN4 (ENSPANG00000021290) #36	HOGA1 (ENSPANG00000040105)	ANKRD2 (ENSPANG00000021351)
Cercopithecinae_d	ANCESTRAL SPECIES	57	ENSGT00940000160584 #7	ENSGT00940000154908.g #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000.o.a #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00730000111173 #36	ENSGT00390000010434.b #35	ENSGT00940000153956.b
Drill	MODERN SPECIES	660	ENSMLEG00000038669 #8	PKD2L1 (ENSMLEG00000033807) #9	BLOC1S2 (ENSMLEG00000044004) #10	CWF19L1 (ENSMLEG00000036355) #11	CHUK (ENSMLEG00000035776) #12	ERLIN1 (ENSMLEG00000029926) #13	CPN1 (ENSMLEG00000038257) #14	DNMBP (ENSMLEG00000043828) #15	ABCC2 (ENSMLEG00000037629) #16	CUTC (ENSMLEG00000043325) #18	COX15 (ENSMLEG00000030859) #17	ENTPD7 (ENSMLEG00000031087) #19	SLC25A28 (ENSMLEG00000034576) #20	NKX2-3 (ENSMLEG00000006314) #21	ENSMLEG00000014598	GOT1 (ENSMLEG00000028411) #22	CNNM1 (ENSMLEG00000038123) #23	ENSMLEG00000029234 #24
Sooty mangabey	MODERN SPECIES	598	WNT8B (ENSCATG00000037399) #7	ENSCATG00000034068 #8	PKD2L1 (ENSCATG00000037422) #9	BLOC1S2 (ENSCATG00000033676) #10	ENSCATG00000043079 #11	CHUK (ENSCATG00000043885) #12	ERLIN1 (ENSCATG00000034416) #13	CPN1 (ENSCATG00000040918) #14	DNMBP (ENSCATG00000030424) #15	ABCC2 (ENSCATG00000028971) #16	CUTC (ENSCATG00000012209) #18	COX15 (ENSCATG00000043600) #17	ENTPD7 (ENSCATG00000001677) #19	SLC25A28 (ENSCATG00000018619) #20	NKX2-3 (ENSCATG00000037715) #21	GOT1 (ENSCATG00000036970) #22	CNNM1 (ENSCATG00000032684) #23	HPSE2 (ENSCATG00000035827) #24	HPS1 (ENSCATG00000035195) #25	PYROXD2 (ENSCATG00000038164) #26	LOXL4 (ENSCATG00000038999) #27	R3HCC1L (ENSCATG00000034502) #28	ENSCATG00000039731	CRTAC1 (ENSCATG00000033100) #29	GOLGA7B (ENSCATG00000039684) #30	SFRP5 (ENSCATG00000041752) #31	ZFYVE27 (ENSCATG00000039847) #32	MARVELD1 (ENSCATG00000010571) #33	AVPI1 (ENSCATG00000036178) #34	MORN4 (ENSCATG00000037202) #36	PI4K2A (ENSCATG00000036094) #35
Rhinopithecus	ANCESTRAL SPECIES	11	ENSGT00910000147853	ENSGT00940000154908.g #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298.c #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00730000111173 #36	ENSGT00390000010434.b #35	ENSGT00940000153956.b
Black snub-nosed monkey	MODERN SPECIES	78	ENSRBIG00000022602	SCD (ENSRBIG00000036699) #8	PKD2L1 (ENSRBIG00000019139) #9	BLOC1S2 (ENSRBIG00000039928) #10	CWF19L1 (ENSRBIG00000033458) #11	CHUK (ENSRBIG00000035878) #12	ERLIN1 (ENSRBIG00000040949) #13	CPN1 (ENSRBIG00000043396) #14	DNMBP (ENSRBIG00000033786) #15	ABCC2 (ENSRBIG00000036097) #16	CUTC (ENSRBIG00000006906) #18	COX15 (ENSRBIG00000038567) #17	ENTPD7 (ENSRBIG00000036449) #19	SLC25A28 (ENSRBIG00000041178) #20	NKX2-3 (ENSRBIG00000038776) #21	GOT1 (ENSRBIG00000020502) #22	CNNM1 (ENSRBIG00000003156) #23	HPSE2 (ENSRBIG00000038333) #24	HPS1 (ENSRBIG00000036336) #25	PYROXD2 (ENSRBIG00000029292) #26	LOXL4 (ENSRBIG00000029695) #27	R3HCC1L (ENSRBIG00000031918) #28	CRTAC1 (ENSRBIG00000032795) #29	GOLGA7B (ENSRBIG00000035613) #30	SFRP5 (ENSRBIG00000033947) #31	ZFYVE27 (ENSRBIG00000031505) #32	AVPI1 (ENSRBIG00000028956) #34	MORN4 (ENSRBIG00000017424) #36	PI4K2A (ENSRBIG00000037559) #35	ANKRD2 (ENSRBIG00000039282)	UBTD1 (ENSRBIG00000044391)
Golden snub-nosed monkey	MODERN SPECIES	3053	ENSRROG00000036106	ENSRROG00000039965 #8	PKD2L1 (ENSRROG00000041606) #9	BLOC1S2 (ENSRROG00000044178) #10	CWF19L1 (ENSRROG00000043660) #11	CHUK (ENSRROG00000042382) #12	ERLIN1 (ENSRROG00000042519) #13	CPN1 (ENSRROG00000031375) #14	DNMBP (ENSRROG00000025406) #15	ABCC2 (ENSRROG00000042002) #16	CUTC (ENSRROG00000039972) #18	COX15 (ENSRROG00000035980) #17	ENTPD7 (ENSRROG00000038161) #19	SLC25A28 (ENSRROG00000029759) #20	NKX2-3 (ENSRROG00000031581) #21	GOT1 (ENSRROG00000045130) #22	CNNM1 (ENSRROG00000041964) #23
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000160584 #7	ENSGT00940000154908.e #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Cebidae	ANCESTRAL SPECIES	17	ENSGT00940000160584 #7	ENSGT00940000154908.e #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a.ob #24	ENSGT00390000004874.a.a.nb.b #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00940000160584 #7	ENSGT00940000154908.e #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a.ob #24	ENSGT00390000004874.a.a.nb.b #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00730000111173 #36	ENSGT00390000010434.b #35
Bolivian squirrel monkey	MODERN SPECIES	47	ENSSBOG00000026797	BLOC1S2 (ENSSBOG00000020521) #10	CWF19L1 (ENSSBOG00000027396) #11	CHUK (ENSSBOG00000024074) #12	ERLIN1 (ENSSBOG00000033053) #13	ENSSBOG00000022350	CPN1 (ENSSBOG00000024485) #14	DNMBP (ENSSBOG00000021393) #15	ABCC2 (ENSSBOG00000034924) #16	CUTC (ENSSBOG00000029115) #18	COX15 (ENSSBOG00000020356) #17	ENTPD7 (ENSSBOG00000029450) #19	ENSSBOG00000029982	SLC25A28 (ENSSBOG00000024135) #20	NKX2-3 (ENSSBOG00000029445) #21	GOT1 (ENSSBOG00000029409) #22	CNNM1 (ENSSBOG00000023360) #23	HPSE2 (ENSSBOG00000035316) #24	ENSSBOG00000025135	HPS1 (ENSSBOG00000001543) #25	PYROXD2 (ENSSBOG00000029428) #26	LOXL4 (ENSSBOG00000029353) #27	R3HCC1L (ENSSBOG00000032433) #28	CRTAC1 (ENSSBOG00000028883) #29	GOLGA7B (ENSSBOG00000028559) #30	SFRP5 (ENSSBOG00000014737) #31	ZFYVE27 (ENSSBOG00000019948) #32	PI4K2A (ENSSBOG00000034802) #35	MORN4 (ENSSBOG00000033451) #36	ANKRD2 (ENSSBOG00000030371)	UBTD1 (ENSSBOG00000027361)
Capuchin	MODERN SPECIES	71	WNT8B (ENSCCAG00000027693) #7	SCD (ENSCCAG00000031776) #8	PKD2L1 (ENSCCAG00000033020) #9	ENSCCAG00000027065 #10	CWF19L1 (ENSCCAG00000031321) #11	CHUK (ENSCCAG00000033466) #12	ERLIN1 (ENSCCAG00000036463) #13	CPN1 (ENSCCAG00000031716) #14	DNMBP (ENSCCAG00000036319) #15	ABCC2 (ENSCCAG00000037977) #16	CUTC (ENSCCAG00000034368) #18	COX15 (ENSCCAG00000013919) #17	ENTPD7 (ENSCCAG00000031589) #19	SLC25A28 (ENSCCAG00000022364) #20	NKX2-3 (ENSCCAG00000028510) #21	GOT1 (ENSCCAG00000036234) #22	CNNM1 (ENSCCAG00000037324) #23	ENSCCAG00000020087	ENSCCAG00000023659 #24	CAMK2A (ENSCCAG00000029738)	SLC6A7 (ENSCCAG00000033881)	CDX1 (ENSCCAG00000029914)	PDGFRB (ENSCCAG00000031575)	ENSCCAG00000026641	CSF1R (ENSCCAG00000033803)	HMGXB3 (ENSCCAG00000023989)	ENSCCAG00000030622	SLC26A2 (ENSCCAG00000020161)	PDE6A (ENSCCAG00000037978)	PPARGC1B (ENSCCAG00000026909)	ARHGEF37 (ENSCCAG00000035607) ##15
Marmoset	MODERN SPECIES	3	BLOC1S2 (ENSCJAG00000017269) #10	CWF19L1 (ENSCJAG00000017176) #11	CHUK (ENSCJAG00000017244) #12	ERLIN1 (ENSCJAG00000017211) #13	ENSCJAG00000072049	CPN1 (ENSCJAG00000017197) #14	DNMBP (ENSCJAG00000017162) #15	ENSCJAG00000085790	ABCC2 (ENSCJAG00000017142) #16	CUTC (ENSCJAG00000017121) #18	COX15 (ENSCJAG00000017107) #17	ENTPD7 (ENSCJAG00000017079) #19	SLC25A28 (ENSCJAG00000042303) #20	NKX2-3 (ENSCJAG00000017049) #21	ENSCJAG00000086661	GOT1 (ENSCJAG00000017037) #22	CNNM1 (ENSCJAG00000016989) #23	ENSCJAG00000083271	ENSCJAG00000084878	HPSE2 (ENSCJAG00000016974) #24	HPS1 (ENSCJAG00000016915) #25	LOXL4 (ENSCJAG00000016875) #27	R3HCC1L (ENSCJAG00000016839) #28	CRTAC1 (ENSCJAG00000016821) #29	ENSCJAG00000087255 #30	SFRP5 (ENSCJAG00000016808) #31	ZFYVE27 (ENSCJAG00000016783) #32	MARVELD1 (ENSCJAG00000016782) #33	AVPI1 (ENSCJAG00000062664) #34	PI4K2A (ENSCJAG00000016755) #35	MORN4 (ENSCJAG00000016744) #36
Mas night monkey	MODERN SPECIES	658	ENSANAG00000015086 #8	ENSANAG00000004992	PKD2L1 (ENSANAG00000034186) #9	BLOC1S2 (ENSANAG00000020045) #10	CWF19L1 (ENSANAG00000023190) #11	CHUK (ENSANAG00000038072) #12	ERLIN1 (ENSANAG00000022217) #13	CPN1 (ENSANAG00000025971) #14	DNMBP (ENSANAG00000026014) #15	ABCC2 (ENSANAG00000021520) #16	CUTC (ENSANAG00000027988) #18	COX15 (ENSANAG00000036238) #17	ENTPD7 (ENSANAG00000033075) #19	SLC25A28 (ENSANAG00000032477) #20	NKX2-3 (ENSANAG00000021481) #21	GOT1 (ENSANAG00000000029) #22	CNNM1 (ENSANAG00000021328) #23	ENSANAG00000003679	ENSANAG00000037434	HPSE2 (ENSANAG00000031117) #24	HPS1 (ENSANAG00000033853) #25	PYROXD2 (ENSANAG00000023225) #26	LOXL4 (ENSANAG00000028977) #27	R3HCC1L (ENSANAG00000035504) #28	CRTAC1 (ENSANAG00000035892) #29	GOLGA7B (ENSANAG00000026383) #30	SFRP5 (ENSANAG00000020345) #31	ZFYVE27 (ENSANAG00000038112) #32	MARVELD1 (ENSANAG00000031120) #33	AVPI1 (ENSANAG00000029881) #34	MORN4 (ENSANAG00000023217) #36
Tarsier	MODERN SPECIES	3606																GOT1 (ENSTSYG00000006005) #22	CNNM1 (ENSTSYG00000026483) #23
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Mouse lemur	MODERN SPECIES	6	SCD (ENSMICG00000044298) #8	PKD2L1 (ENSMICG00000015366) #9	BLOC1S2 (ENSMICG00000046700) #10	CWF19L1 (ENSMICG00000034162) #11	ENSMICG00000036445 #12	ERLIN1 (ENSMICG00000038590) #13	CYP2C23 (ENSMICG00000045388)	CPN1 (ENSMICG00000006739) #14	DNMBP (ENSMICG00000006721) #15	ABCC2 (ENSMICG00000006689) #16	CUTC (ENSMICG00000042705) #18	COX15 (ENSMICG00000010505) #17	ENTPD7 (ENSMICG00000010496) #19	SLC25A28 (ENSMICG00000010489) #20	NKX2-3 (ENSMICG00000002913) #21	GOT1 (ENSMICG00000010482) #22	CNNM1 (ENSMICG00000010474) #23	ENSMICG00000034050	HPSE2 (ENSMICG00000000214) #24	HPS1 (ENSMICG00000000212) #25	PYROXD2 (ENSMICG00000000210) #26	LOXL4 (ENSMICG00000000209) #27	R3HCC1L (ENSMICG00000000208) #28	CRTAC1 (ENSMICG00000000201) #29	GOLGA7B (ENSMICG00000000199) #30	SFRP5 (ENSMICG00000044070) #31	ZFYVE27 (ENSMICG00000000197) #32	AVPI1 (ENSMICG00000030042) #34	MORN4 (ENSMICG00000047547) #36	C10orf62 (ENSMICG00000007711) #37	PI4K2A (ENSMICG00000007703) #35
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Coquerels sifaka	MODERN SPECIES	870	WNT8B (ENSPCOG00000027043) #7	SCD (ENSPCOG00000026946) #8	PKD2L1 (ENSPCOG00000001148) #9	BLOC1S2 (ENSPCOG00000024329) #10	CWF19L1 (ENSPCOG00000019363) #11	CHUK (ENSPCOG00000027527) #12	ERLIN1 (ENSPCOG00000018487) #13	CPN1 (ENSPCOG00000020726) #14	DNMBP (ENSPCOG00000025825) #15	ABCC2 (ENSPCOG00000025440) #16	CUTC (ENSPCOG00000002916) #18	COX15 (ENSPCOG00000013672) #17	ENTPD7 (ENSPCOG00000018900) #19	SLC25A28 (ENSPCOG00000014616) #20	NKX2-3 (ENSPCOG00000018687) #21	GOT1 (ENSPCOG00000027796) #22	CNNM1 (ENSPCOG00000028638) #23	HPSE2 (ENSPCOG00000022122) #24	HPS1 (ENSPCOG00000017215) #25	PYROXD2 (ENSPCOG00000018342) #26	LOXL4 (ENSPCOG00000015110) #27	R3HCC1L (ENSPCOG00000025907) #28
Greater bamboo lemur	MODERN SPECIES	968	PKD2L1 (ENSPSMG00000012616) #9	ENSPSMG00000012584 #10	CWF19L1 (ENSPSMG00000012541) #11	CHUK (ENSPSMG00000012497) #12	ERLIN1 (ENSPSMG00000012426) #13	ENSPSMG00000011438	CPN1 (ENSPSMG00000010767) #14	ENSPSMG00000010760	DNMBP (ENSPSMG00000010675) #15	ABCC2 (ENSPSMG00000010528) #16	CUTC (ENSPSMG00000010417) #18	COX15 (ENSPSMG00000010383) #17	ENTPD7 (ENSPSMG00000010334) #19	SLC25A28 (ENSPSMG00000010302) #20	NKX2-3 (ENSPSMG00000010298) #21	GOT1 (ENSPSMG00000010275) #22	CNNM1 (ENSPSMG00000010230) #23	ENSPSMG00000010211	HPSE2 (ENSPSMG00000010143) #24	HPS1 (ENSPSMG00000009889) #25	PYROXD2 (ENSPSMG00000009714) #26	LOXL4 (ENSPSMG00000009688) #27	R3HCC1L (ENSPSMG00000009613) #28	CRTAC1 (ENSPSMG00000009508) #29	GOLGA7B (ENSPSMG00000009462) #30	SFRP5 (ENSPSMG00000009435) #31	ZFYVE27 (ENSPSMG00000009295) #32	MARVELD1 (ENSPSMG00000009082) #33	AVPI1 (ENSPSMG00000009076) #34	PI4K2A (ENSPSMG00000009062) #35	MORN4 (ENSPSMG00000009044) #36
Bushbaby	MODERN SPECIES	136	WNT8B (ENSOGAG00000029889) #7	SCD (ENSOGAG00000002486) #8	PKD2L1 (ENSOGAG00000013430) #9	BLOC1S2 (ENSOGAG00000001395) #10	CWF19L1 (ENSOGAG00000013425) #11	CHUK (ENSOGAG00000013415) #12	ERLIN1 (ENSOGAG00000026651) #13	CPN1 (ENSOGAG00000008493) #14	DNMBP (ENSOGAG00000001589) #15	ABCC2 (ENSOGAG00000001587) #16	CUTC (ENSOGAG00000001584) #18	COX15 (ENSOGAG00000001582) #17	ENTPD7 (ENSOGAG00000001579) #19	SLC25A28 (ENSOGAG00000005668) #20	NKX2-3 (ENSOGAG00000013370) #21	GOT1 (ENSOGAG00000005666) #22	CNNM1 (ENSOGAG00000027397) #23	HPSE2 (ENSOGAG00000013186) #24	HPS1 (ENSOGAG00000013179) #25	PYROXD2 (ENSOGAG00000013175) #26	LOXL4 (ENSOGAG00000013165) #27	R3HCC1L (ENSOGAG00000013152) #28	CRTAC1 (ENSOGAG00000014055) #29	GOLGA7B (ENSOGAG00000017079) #30	SFRP5 (ENSOGAG00000017076) #31	ZFYVE27 (ENSOGAG00000033211) #32	MARVELD1 (ENSOGAG00000024985) #33	AVPI1 (ENSOGAG00000024961) #34	PI4K2A (ENSOGAG00000009957) #35	MORN4 (ENSOGAG00000008789) #36	HOGA1 (ENSOGAG00000008783)
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Tree shrew	MODERN SPECIES	844																GOT1 (ENSTBEG00000015886) #22	ENSTBEG00000015777 #23
Glires	ANCESTRAL SPECIES	16	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000154908.s.a #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000154908.s.a #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000154908.s.a #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000162971.c.b	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000162971.c.b	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000162971.c.b	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Northern American deer mouse	MODERN SPECIES		Pkd2l1 (ENSPEMG00000003667) #9	Bloc1s2 (ENSPEMG00000015678) #10	ENSPEMG00000028291	Cwf19l1 (ENSPEMG00000013069) #11	Chuk (ENSPEMG00000003607) #12	Erlin1 (ENSPEMG00000018538) #13	Cyp2c23 (ENSPEMG00000009996)	Cpn1 (ENSPEMG00000017111) #14	Dnmbp (ENSPEMG00000004169) #15	Abcc2 (ENSPEMG00000011249) #16	Cutc (ENSPEMG00000008839) #18	Cox15 (ENSPEMG00000014240) #17	Entpd7 (ENSPEMG00000010179) #19	Slc25a28 (ENSPEMG00000012732) #20	Nkx2-3 (ENSPEMG00000030266) #21	Got1 (ENSPEMG00000010376) #22	Cnnm1 (ENSPEMG00000007501) #23	Hpse2 (ENSPEMG00000009236) #24	Hps1 (ENSPEMG00000016367) #25	Pyroxd2 (ENSPEMG00000008189) #26	Loxl4 (ENSPEMG00000013107) #27	R3hcc1l (ENSPEMG00000009290) #28	Crtac1 (ENSPEMG00000018527) #29	Golga7b (ENSPEMG00000019018) #30	Sfrp5 (ENSPEMG00000018114) #31	Zfyve27 (ENSPEMG00000000658) #32	Marveld1 (ENSPEMG00000000505) #33	Avpi1 (ENSPEMG00000011234) #34	Pi4k2a (ENSPEMG00000016260) #35	Morn4 (ENSPEMG00000027726) #36	Hoga1 (ENSPEMG00000014860)
Prairie vole	MODERN SPECIES	16	Scd3 (ENSMOCG00000001880)	Pkd2l1 (ENSMOCG00000006800) #9	Bloc1s2 (ENSMOCG00000003511) #10	Cwf19l1 (ENSMOCG00000021513) #11	Chuk (ENSMOCG00000020869) #12	Erlin1 (ENSMOCG00000017984) #13	ENSMOCG00000022931	Cpn1 (ENSMOCG00000020512) #14	Dnmbp (ENSMOCG00000015535) #15	Abcc2 (ENSMOCG00000008644) #16	Cutc (ENSMOCG00000002743) #18	Cox15 (ENSMOCG00000001780) #17	Entpd7 (ENSMOCG00000020235) #19	Slc25a28 (ENSMOCG00000015560) #20	Nkx2-3 (ENSMOCG00000013130) #21	Got1 (ENSMOCG00000022592) #22	Cnnm1 (ENSMOCG00000006772) #23	ENSMOCG00000002567	Hpse2 (ENSMOCG00000002351) #24	Hps1 (ENSMOCG00000002839) #25	Pyroxd2 (ENSMOCG00000003523) #26	Loxl4 (ENSMOCG00000018615) #27	ENSMOCG00000019358 #28	Crtac1 (ENSMOCG00000021947) #29	Golga7b (ENSMOCG00000018394) #30	Sfrp5 (ENSMOCG00000017190) #31	Zfyve27 (ENSMOCG00000014672) #32	Marveld1 (ENSMOCG00000013119) #33	Avpi1 (ENSMOCG00000012593) #34	Pi4k2a (ENSMOCG00000012623) #35	Morn4 (ENSMOCG00000011013) #36
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000162971.c.b	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Golden Hamster	MODERN SPECIES	617	ENSMAUG00000016232 #8	ENSMAUG00000018775	Scd3 (ENSMAUG00000019555)	Pkd2l1 (ENSMAUG00000017374) #9	Cwf19l1 (ENSMAUG00000016480) #11	Chuk (ENSMAUG00000017206) #12	Erlin1 (ENSMAUG00000019313) #13	Cpn1 (ENSMAUG00000020473) #14	Dnmbp (ENSMAUG00000021363) #15	Abcc2 (ENSMAUG00000017544) #16	Cutc (ENSMAUG00000017160) #18	Cox15 (ENSMAUG00000019550) #17	Entpd7 (ENSMAUG00000018067) #19	Slc25a28 (ENSMAUG00000016762) #20	Nkx2-3 (ENSMAUG00000019421) #21	Got1 (ENSMAUG00000017853) #22	Cnnm1 (ENSMAUG00000018739) #23	Hpse2 (ENSMAUG00000020448) #24	Hps1 (ENSMAUG00000019246) #25	Pyroxd2 (ENSMAUG00000017820) #26	Loxl4 (ENSMAUG00000019599) #27	ENSMAUG00000018764 #28	Crtac1 (ENSMAUG00000019399) #29	Golga7b (ENSMAUG00000019120) #30	Sfrp5 (ENSMAUG00000019322) #31	Zfyve27 (ENSMAUG00000020339) #32	Marveld1 (ENSMAUG00000020397) #33	Avpi1 (ENSMAUG00000020844) #34	Pi4k2a (ENSMAUG00000018850) #35	Morn4 (ENSMAUG00000019301) #36	Hoga1 (ENSMAUG00000021216)
Chinese hamster chok1gshd	MODERN SPECIES	263	Pkd2l1 (ENSCGRG00001014175) #9	Bloc1s2 (ENSCGRG00001015011) #10	Cwf19l1 (ENSCGRG00001015704) #11	Chuk (ENSCGRG00001016974) #12	Erlin1 (ENSCGRG00001018321) #13	Cyp2c23 (ENSCGRG00001019601)	Cpn1 (ENSCGRG00001020231) #14	Dnmbp (ENSCGRG00001002955) #15	Abcc2 (ENSCGRG00001011487) #16	Cutc (ENSCGRG00001013542) #18	Cox15 (ENSCGRG00001014605) #17	Entpd7 (ENSCGRG00001015434) #19	Slc25a28 (ENSCGRG00001016289) #20	ENSCGRG00001011590	Nkx2-3 (ENSCGRG00001011819) #21	Got1 (ENSCGRG00001012066) #22	Cnnm1 (ENSCGRG00001012560) #23	Hpse2 (ENSCGRG00001015117) #24	Hps1 (ENSCGRG00001017475) #25	Pyroxd2 (ENSCGRG00001020681) #26	Loxl4 (ENSCGRG00001021180) #27	R3hcc1l (ENSCGRG00001022500) #28	Crtac1 (ENSCGRG00001023131) #29	Golga7b (ENSCGRG00001000198) #30	Sfrp5 (ENSCGRG00001000510) #31	Zfyve27 (ENSCGRG00001001467) #32	Marveld1 (ENSCGRG00001015304) #33	Avpi1 (ENSCGRG00001003238) #34	Pi4k2a (ENSCGRG00001006184) #35	Morn4 (ENSCGRG00001008672) #36	Hoga1 (ENSCGRG00001010186)
Murinae	ANCESTRAL SPECIES		ENSGT00940000162971.c.b	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Mus	ANCESTRAL SPECIES		ENSGT00940000162971.c.b	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000162971.c.b	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000162971.c.b	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Mus_C	ANCESTRAL SPECIES	24	ENSGT00940000162971.c.b	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3317	ENSMSIG00000013578	ENSMSIG00000013604 #8	Pkd2l1 (ENSMSIG00000013623) #9	ENSMSIG00000013690 #10	Cwf19l1 (ENSMSIG00000013717) #11	Chuk (ENSMSIG00000013784) #12	ENSMSIG00000013896	Cpn1 (ENSMSIG00000013970) #14	Dnmbp (ENSMSIG00000013995) #15	Abcc2 (ENSMSIG00000014396) #16	Cutc (ENSMSIG00000014461) #18	Cox15 (ENSMSIG00000014488) #17	Entpd7 (ENSMSIG00000014516) #19	Slc25a28 (ENSMSIG00000014549) #20	Nkx2-3 (ENSMSIG00000014564) #21	ENSMSIG00000014579 #22	Cnnm1 (ENSMSIG00000014602) #23	ENSMSIG00000014652 #24	ENSMSIG00000014659
Steppe mouse	MODERN SPECIES	2895														Trmt11 (ENSMSIG00000000873)	ENSMSIG00000000946	ENSMSIG00000000980 #22	Cenpw (ENSMSIG00000000994)	ENSMSIG00000001019	ENSMSIG00000001036	Rspo3 (ENSMSIG00000001044)	Rnf146 (ENSMSIG00000001088)	ENSMSIG00000001121	9330159F19Rik (ENSMSIG00000001137)	Soga3 (ENSMSIG00000001173)	ENSMSIG00000001198
spretus	MODERN SPECIES	10	Scd3 (MGP_SPRETEiJ_G0023916)	Pkd2l1 (MGP_SPRETEiJ_G0023915) #9	Bloc1s2 (MGP_SPRETEiJ_G0023914) #10	Cwf19l1 (MGP_SPRETEiJ_G0023913) #11	Chuk (MGP_SPRETEiJ_G0023912) #12	Erlin1 (MGP_SPRETEiJ_G0023911) #13	Cyp2c23 (MGP_SPRETEiJ_G0023910)	Cpn1 (MGP_SPRETEiJ_G0023909) #14	Dnmbp (MGP_SPRETEiJ_G0023908) #15	Abcc2 (MGP_SPRETEiJ_G0023907) #16	Cutc (MGP_SPRETEiJ_G0023906) #18	Cox15 (MGP_SPRETEiJ_G0023905) #17	Entpd7 (MGP_SPRETEiJ_G0023904) #19	Slc25a28 (MGP_SPRETEiJ_G0023903) #20	Nkx2-3 (MGP_SPRETEiJ_G0023902) #21	Got1 (MGP_SPRETEiJ_G0023901) #22	Cnnm1 (MGP_SPRETEiJ_G0023900) #23	Hpse2 (MGP_SPRETEiJ_G0023899) #24	Hps1 (MGP_SPRETEiJ_G0023898) #25	Pyroxd2 (MGP_SPRETEiJ_G0023897) #26	Loxl4 (MGP_SPRETEiJ_G0023896) #27	R3hcc1l (MGP_SPRETEiJ_G0023895) #28	Crtac1 (MGP_SPRETEiJ_G0023894) #29	Golga7b (MGP_SPRETEiJ_G0023893) #30	Sfrp5 (MGP_SPRETEiJ_G0023892) #31	Zfyve27 (MGP_SPRETEiJ_G0023891) #32	Marveld1 (MGP_SPRETEiJ_G0023890) #33	Avpi1 (MGP_SPRETEiJ_G0023889) #34	Pi4k2a (MGP_SPRETEiJ_G0023888) #35	Morn4 (MGP_SPRETEiJ_G0023887) #36	4933411K16Rik (MGP_SPRETEiJ_G0023886) #37
Mouse	MODERN SPECIES	10	Scd3 (ENSMUSG00000025202)	Pkd2l1 (ENSMUSG00000037578) #9	Bloc1s2 (ENSMUSG00000057506) #10	Cwf19l1 (ENSMUSG00000025200) #11	Chuk (ENSMUSG00000025199) #12	Erlin1 (ENSMUSG00000025198) #13	Cyp2c23 (ENSMUSG00000025197)	Cpn1 (ENSMUSG00000025196) #14	Dnmbp (ENSMUSG00000025195) #15	Abcc2 (ENSMUSG00000025194) #16	Cutc (ENSMUSG00000025193) #18	Cox15 (ENSMUSG00000040018) #17	Entpd7 (ENSMUSG00000025192) #19	Slc25a28 (ENSMUSG00000040414) #20	Nkx2-3 (ENSMUSG00000044220) #21	Got1 (ENSMUSG00000025190) #22	Cnnm1 (ENSMUSG00000025189) #23	Hpse2 (ENSMUSG00000074852) #24	Hps1 (ENSMUSG00000025188) #25	Pyroxd2 (ENSMUSG00000060224) #26	Loxl4 (ENSMUSG00000025185) #27	R3hcc1l (ENSMUSG00000025184) #28	Crtac1 (ENSMUSG00000042401) #29	Golga7b (ENSMUSG00000042532) #30	Sfrp5 (ENSMUSG00000018822) #31	Zfyve27 (ENSMUSG00000018820) #32	Marveld1 (ENSMUSG00000044345) #33	Avpi1 (ENSMUSG00000018821) #34	Pi4k2a (ENSMUSG00000025178) #35	Morn4 (ENSMUSG00000049670) #36	4933411K16Rik (ENSMUSG00000090369) #37
Ryukyu mouse	MODERN SPECIES	10	Scd3 (MGP_CAROLIEiJ_G0022995)	Pkd2l1 (MGP_CAROLIEiJ_G0022994) #9	Bloc1s2 (MGP_CAROLIEiJ_G0022993) #10	Cwf19l1 (MGP_CAROLIEiJ_G0022992) #11	Chuk (MGP_CAROLIEiJ_G0022991) #12	Erlin1 (MGP_CAROLIEiJ_G0022990) #13	Cyp2c23 (MGP_CAROLIEiJ_G0022989)	Cpn1 (MGP_CAROLIEiJ_G0022988) #14	Dnmbp (MGP_CAROLIEiJ_G0022987) #15	Abcc2 (MGP_CAROLIEiJ_G0022986) #16	Cutc (MGP_CAROLIEiJ_G0022985) #18	Cox15 (MGP_CAROLIEiJ_G0022984) #17	Entpd7 (MGP_CAROLIEiJ_G0022983) #19	Slc25a28 (MGP_CAROLIEiJ_G0022982) #20	Nkx2-3 (MGP_CAROLIEiJ_G0022981) #21	Got1 (MGP_CAROLIEiJ_G0022980) #22	Cnnm1 (MGP_CAROLIEiJ_G0022979) #23	Hpse2 (MGP_CAROLIEiJ_G0022978) #24	Hps1 (MGP_CAROLIEiJ_G0022977) #25	Pyroxd2 (MGP_CAROLIEiJ_G0022976) #26	Loxl4 (MGP_CAROLIEiJ_G0022975) #27	R3hcc1l (MGP_CAROLIEiJ_G0022974) #28	Crtac1 (MGP_CAROLIEiJ_G0022973) #29	Golga7b (MGP_CAROLIEiJ_G0022972) #30	Sfrp5 (MGP_CAROLIEiJ_G0022971) #31	Zfyve27 (MGP_CAROLIEiJ_G0022970) #32	Marveld1 (MGP_CAROLIEiJ_G0022969) #33	Avpi1 (MGP_CAROLIEiJ_G0022968) #34	Pi4k2a (MGP_CAROLIEiJ_G0022967) #35	Morn4 (MGP_CAROLIEiJ_G0022966) #36	4933411K16Rik (MGP_CAROLIEiJ_G0022965) #37
Shrew mouse	MODERN SPECIES		Scd3 (MGP_PahariEiJ_G0014485)	Pkd2l1 (MGP_PahariEiJ_G0014484) #9	Bloc1s2 (MGP_PahariEiJ_G0014483) #10	Cwf19l1 (MGP_PahariEiJ_G0014482) #11	Chuk (MGP_PahariEiJ_G0014481) #12	Erlin1 (MGP_PahariEiJ_G0014480) #13	Cyp2c23 (MGP_PahariEiJ_G0014479)	Cpn1 (MGP_PahariEiJ_G0014478) #14	Dnmbp (MGP_PahariEiJ_G0014477) #15	Abcc2 (MGP_PahariEiJ_G0014476) #16	Cutc (MGP_PahariEiJ_G0014475) #18	Cox15 (MGP_PahariEiJ_G0014474) #17	Entpd7 (MGP_PahariEiJ_G0014473) #19	Slc25a28 (MGP_PahariEiJ_G0014472) #20	Nkx2-3 (MGP_PahariEiJ_G0014471) #21	Got1 (MGP_PahariEiJ_G0014470) #22	Cnnm1 (MGP_PahariEiJ_G0014469) #23	Hpse2 (MGP_PahariEiJ_G0014468) #24	Hps1 (MGP_PahariEiJ_G0014467) #25	Pyroxd2 (MGP_PahariEiJ_G0014466) #26	Loxl4 (MGP_PahariEiJ_G0014465) #27	R3hcc1l (MGP_PahariEiJ_G0014464) #28	Crtac1 (MGP_PahariEiJ_G0014463) #29	Golga7b (MGP_PahariEiJ_G0014462) #30	Sfrp5 (MGP_PahariEiJ_G0014461) #31	Zfyve27 (MGP_PahariEiJ_G0014460) #32	Marveld1 (MGP_PahariEiJ_G0014459) #33	Avpi1 (MGP_PahariEiJ_G0014458) #34	Pi4k2a (MGP_PahariEiJ_G0014457) #35	Morn4 (MGP_PahariEiJ_G0014456) #36	4933411K16Rik (MGP_PahariEiJ_G0014455) #37
Rat	MODERN SPECIES		LOC681458 (ENSRNOG00000013279)	Pkd2l1 (ENSRNOG00000012591) #9	Bloc1s2 (ENSRNOG00000012684) #10	Cwf19l1 (ENSRNOG00000012763) #11	Chuk (ENSRNOG00000022485) #12	Erlin1 (ENSRNOG00000012911) #13	Cyp2c23 (ENSRNOG00000013291)	Cpn1 (ENSRNOG00000013439) #14	Dnmbp (ENSRNOG00000050742) #15	Abcc2 (ENSRNOG00000046727) #16	Cutc (ENSRNOG00000017298) #18	Cox15 (ENSRNOG00000017230) #17	Entpd7 (ENSRNOG00000016883) #19	Slc25a28 (ENSRNOG00000016751) #20	Nkx2-3 (ENSRNOG00000016656) #21	Got1 (ENSRNOG00000016356) #22	Cnnm1 (ENSRNOG00000016302) #23	ENSRNOG00000065211	Hpse2 (ENSRNOG00000064037) #24	Hps1 (ENSRNOG00000045838) #25	Pyroxd2 (ENSRNOG00000015807) #26	Loxl4 (ENSRNOG00000015727) #27	R3hcc1l (ENSRNOG00000051256) #28	Crtac1 (ENSRNOG00000015220) #29	Golga7b (ENSRNOG00000015051) #30	AABR07006871.1 (ENSRNOG00000053536)	Sfrp5 (ENSRNOG00000014940) #31	Zfyve27 (ENSRNOG00000014903) #32	Marveld1 (ENSRNOG00000042620)	Avpi1 (ENSRNOG00000014828) #34	Pi4k2a (ENSRNOG00000014675) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	771									Dnmbp (ENSNGAG00000011513) #15	Abcc2 (ENSNGAG00000017615) #16	Cutc (ENSNGAG00000024190) #18	Cox15 (ENSNGAG00000023623) #17	Entpd7 (ENSNGAG00000012372) #19	Slc25a28 (ENSNGAG00000023260) #20	Nkx2-3 (ENSNGAG00000021093) #21	Got1 (ENSNGAG00000005165) #22	Cnnm1 (ENSNGAG00000016351) #23	Hpse2 (ENSNGAG00000021159) #24	Hps1 (ENSNGAG00000013601) #25	Pyroxd2 (ENSNGAG00000021947) #26	Loxl4 (ENSNGAG00000014165) #27	ENSNGAG00000017124 #28	Crtac1 (ENSNGAG00000021345) #29	Golga7b (ENSNGAG00000001605) #30	Sfrp5 (ENSNGAG00000022581) #31	Zfyve27 (ENSNGAG00000012854) #32	Marveld1 (ENSNGAG00000006309) #33	Avpi1 (ENSNGAG00000020134) #34	Pi4k2a (ENSNGAG00000022396) #35	Morn4 (ENSNGAG00000018405) #36	Hoga1 (ENSNGAG00000023929)
Lesser Egyptian jerboa	MODERN SPECIES	179	Pkd2l1 (ENSJJAG00000013834) #9	ENSJJAG00000015079 #10	Cwf19l1 (ENSJJAG00000015368) #11	ENSJJAG00000016093 #12	Erlin1 (ENSJJAG00000016685) #13	Cpn1 (ENSJJAG00000016862) #14	Dnmbp (ENSJJAG00000017540) #15	Abcc2 (ENSJJAG00000020088) #16	ENSJJAG00000010550 #18	Cox15 (ENSJJAG00000011715) #17	ENSJJAG00000012745	Entpd7 (ENSJJAG00000015308) #19	ENSJJAG00000015832	Slc25a28 (ENSJJAG00000016611) #20	Nkx2-3 (ENSJJAG00000017127) #21	Got1 (ENSJJAG00000019106) #22	Cnnm1 (ENSJJAG00000013432) #23	Hpse2 (ENSJJAG00000015190) #24	Hps1 (ENSJJAG00000017073) #25	Pyroxd2 (ENSJJAG00000022532) #26	Loxl4 (ENSJJAG00000013296) #27	ENSJJAG00000020251 #28	Crtac1 (ENSJJAG00000020645) #29	Golga7b (ENSJJAG00000021511) #30	Sfrp5 (ENSJJAG00000022836) #31	Zfyve27 (ENSJJAG00000005638) #32	Marveld1 (ENSJJAG00000012601) #33	Avpi1 (ENSJJAG00000021703) #34	Pi4k2a (ENSJJAG00000021991) #35	Morn4 (ENSJJAG00000013030) #36	Hoga1 (ENSJJAG00000013267)
Kangaroo rat	MODERN SPECIES	355	Pkd2l1 (ENSDORG00000006223) #9	Bloc1s2 (ENSDORG00000028226) #10	Cwf19l1 (ENSDORG00000011967) #11	Chuk (ENSDORG00000011965) #12	Erlin1 (ENSDORG00000026468) #13	ENSDORG00000027804	Cpn1 (ENSDORG00000011960) #14	ENSDORG00000011072 #15	Abcc2 (ENSDORG00000009085) #16	ENSDORG00000028853	Cutc (ENSDORG00000005428) #18	Cox15 (ENSDORG00000005427) #17	Entpd7 (ENSDORG00000005426) #19	Slc25a28 (ENSDORG00000003647) #20	Nkx2-3 (ENSDORG00000003645) #21	Got1 (ENSDORG00000014708) #22	Cnnm1 (ENSDORG00000014706) #23	Hpse2 (ENSDORG00000003807) #24	Hps1 (ENSDORG00000003804) #25	Pyroxd2 (ENSDORG00000003802) #26	Loxl4 (ENSDORG00000015733) #27	ENSDORG00000024055 #28	Crtac1 (ENSDORG00000015477) #29	Golga7b (ENSDORG00000015475) #30	Sfrp5 (ENSDORG00000008180) #31	Zfyve27 (ENSDORG00000008178) #32	Marveld1 (ENSDORG00000002279) #33	Avpi1 (ENSDORG00000028399) #34	Pi4k2a (ENSDORG00000002269) #35	Morn4 (ENSDORG00000016540) #36	Hoga1 (ENSDORG00000016537)
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00940000154908.q.a.b #8	ENSGT00940000154908.q.b #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Marmotini	ANCESTRAL SPECIES	16	ENSGT01030000234637.a.b.b.j.a	ENSGT00940000154908.q.b #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Marmotini_b	ANCESTRAL SPECIES	97					ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Arctic ground squirrel	MODERN SPECIES	145				CWF19L1 (ENSUPAG00010018584) #11	CHUK (ENSUPAG00010018536) #12	ERLIN1 (ENSUPAG00010018524) #13	CPN1 (ENSUPAG00010018515) #14	DNMBP (ENSUPAG00010018385) #15	ABCC2 (ENSUPAG00010018333) #16	CUTC (ENSUPAG00010018317) #18	COX15 (ENSUPAG00010018308) #17	ENTPD7 (ENSUPAG00010018296) #19	SLC25A28 (ENSUPAG00010018285) #20	NKX2-3 (ENSUPAG00010018277) #21	ENSUPAG00010018264	GOT1 (ENSUPAG00010018253) #22	CNNM1 (ENSUPAG00010018225) #23	HPSE2 (ENSUPAG00010018211) #24	HPS1 (ENSUPAG00010015101) #25	PYROXD2 (ENSUPAG00010015034) #26	LOXL4 (ENSUPAG00010014949) #27	R3HCC1L (ENSUPAG00010014922) #28	CRTAC1 (ENSUPAG00010014843) #29	GOLGA7B (ENSUPAG00010014804) #30	SFRP5 (ENSUPAG00010014793) #31	ZFYVE27 (ENSUPAG00010014758) #32	MARVELD1 (ENSUPAG00010014753) #33	AVPI1 (ENSUPAG00010014745) #34	PI4K2A (ENSUPAG00010014721) #35	MORN4 (ENSUPAG00010014704) #36	ENSUPAG00010014696 #37
Squirrel	MODERN SPECIES	236					CWF19L1 (ENSSTOG00000005784) #11	CHUK (ENSSTOG00000016412) #12	ERLIN1 (ENSSTOG00000028018) #13	CPN1 (ENSSTOG00000008870) #14	DNMBP (ENSSTOG00000008832) #15	ABCC2 (ENSSTOG00000009688) #16	CUTC (ENSSTOG00000010467) #18	COX15 (ENSSTOG00000010459) #17	ENTPD7 (ENSSTOG00000010447) #19	SLC25A28 (ENSSTOG00000027786) #20	NKX2-3 (ENSSTOG00000010439) #21	GOT1 (ENSSTOG00000007527) #22	CNNM1 (ENSSTOG00000019801) #23	HPSE2 (ENSSTOG00000003713) #24	HPS1 (ENSSTOG00000003686) #25	PYROXD2 (ENSSTOG00000003659) #26	LOXL4 (ENSSTOG00000026677) #27	R3HCC1L (ENSSTOG00000021571) #28	CRTAC1 (ENSSTOG00000012122) #29	GOLGA7B (ENSSTOG00000012116) #30	SFRP5 (ENSSTOG00000012113) #31	ZFYVE27 (ENSSTOG00000012103) #32	MARVELD1 (ENSSTOG00000006756) #33	AVPI1 (ENSSTOG00000029293) #34	PI4K2A (ENSSTOG00000006737) #35	MORN4 (ENSSTOG00000026926) #36	HOGA1 (ENSSTOG00000011929)
Alpin marmot	MODERN SPECIES	39	ENSMMMG00000022981	ENSMMMG00000022972 #8	PKD2L1 (ENSMMMG00000022963) #9	BLOC1S2 (ENSMMMG00000022960) #10	CWF19L1 (ENSMMMG00000022947) #11	CHUK (ENSMMMG00000022931) #12	ERLIN1 (ENSMMMG00000022928) #13	CPN1 (ENSMMMG00000022921) #14	DNMBP (ENSMMMG00000022849) #15	ABCC2 (ENSMMMG00000022832) #16	ENSMMMG00000022829 #18	COX15 (ENSMMMG00000022826) #17	ENTPD7 (ENSMMMG00000022820) #19	SLC25A28 (ENSMMMG00000022817) #20	NKX2-3 (ENSMMMG00000022815) #21	GOT1 (ENSMMMG00000022811) #22	CNNM1 (ENSMMMG00000022793) #23	HPSE2 (ENSMMMG00000022778) #24	HPS1 (ENSMMMG00000021856) #25	PYROXD2 (ENSMMMG00000021833) #26	LOXL4 (ENSMMMG00000021798) #27	R3HCC1L (ENSMMMG00000021780) #28	CRTAC1 (ENSMMMG00000021757) #29	GOLGA7B (ENSMMMG00000021751) #30	SFRP5 (ENSMMMG00000021743) #31	ZFYVE27 (ENSMMMG00000021729) #32	AVPI1 (ENSMMMG00000021725) #34	PI4K2A (ENSMMMG00000021697) #35	ENSMMMG00000021693 #36	C10orf62 (ENSMMMG00000021691) #37	HOGA1 (ENSMMMG00000021688)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005011263 #8	PKD2L1 (ENSSVLG00005011378) #9	BLOC1S2 (ENSSVLG00005011909) #10	CWF19L1 (ENSSVLG00005012058) #11	CHUK (ENSSVLG00005012127) #12	ERLIN1 (ENSSVLG00005012186) #13	ENSSVLG00005012246	CPN1 (ENSSVLG00005012310) #14	DNMBP (ENSSVLG00005012459) #15	ABCC2 (ENSSVLG00005012720) #16	CUTC (ENSSVLG00005013175) #18	COX15 (ENSSVLG00005013263) #17	ENTPD7 (ENSSVLG00005013324) #19	SLC25A28 (ENSSVLG00005013360) #20	NKX2-3 (ENSSVLG00005013448) #21	GOT1 (ENSSVLG00005013505) #22	CNNM1 (ENSSVLG00005013611) #23	HPSE2 (ENSSVLG00005014098) #24	HPS1 (ENSSVLG00005014775) #25	PYROXD2 (ENSSVLG00005015178) #26	LOXL4 (ENSSVLG00005015215) #27	R3HCC1L (ENSSVLG00005015247) #28	CRTAC1 (ENSSVLG00005015382) #29	GOLGA7B (ENSSVLG00005015799) #30	SFRP5 (ENSSVLG00005015909) #31	ZFYVE27 (ENSSVLG00005015995) #32	MARVELD1 (ENSSVLG00005016317) #33	AVPI1 (ENSSVLG00005016336) #34	PI4K2A (ENSSVLG00005016376) #35	MORN4 (ENSSVLG00005016417) #36	HOGA1 (ENSSVLG00005016513)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000154908.o #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Long-tailed chinchilla	MODERN SPECIES	214	SCD (ENSCLAG00000002366) #8	PKD2L1 (ENSCLAG00000012878) #9	BLOC1S2 (ENSCLAG00000012543) #10	CWF19L1 (ENSCLAG00000007821) #11	CHUK (ENSCLAG00000003896) #12	ERLIN1 (ENSCLAG00000003770) #13	ENSCLAG00000003725	CPN1 (ENSCLAG00000003686) #14	DNMBP (ENSCLAG00000003323) #15	ABCC2 (ENSCLAG00000003041) #16	CUTC (ENSCLAG00000004139) #18	COX15 (ENSCLAG00000004070) #17	ENTPD7 (ENSCLAG00000004017) #19	SLC25A28 (ENSCLAG00000002948) #20	NKX2-3 (ENSCLAG00000002178) #21	GOT1 (ENSCLAG00000002152) #22	CNNM1 (ENSCLAG00000002026) #23	HPSE2 (ENSCLAG00000001979) #24	HPS1 (ENSCLAG00000003379) #25	PYROXD2 (ENSCLAG00000003225) #26	LOXL4 (ENSCLAG00000002846) #27	R3HCC1L (ENSCLAG00000002695) #28	CRTAC1 (ENSCLAG00000002601) #29	GOLGA7B (ENSCLAG00000002560) #30	SFRP5 (ENSCLAG00000002118) #31	ZFYVE27 (ENSCLAG00000002084) #32	MARVELD1 (ENSCLAG00000002008) #33	AVPI1 (ENSCLAG00000001993) #34	PI4K2A (ENSCLAG00000001867) #35	MORN4 (ENSCLAG00000001852) #36	HOGA1 (ENSCLAG00000002513)
Degu	MODERN SPECIES	51	CWF19L1 (ENSODEG00000017213) #11	CHUK (ENSODEG00000016580) #12	ERLIN1 (ENSODEG00000016587) #13	ENSODEG00000020374	ENSODEG00000016389	ENSODEG00000020402	CPN1 (ENSODEG00000016323) #14	DNMBP (ENSODEG00000017308) #15	ABCC2 (ENSODEG00000016634) #16	CUTC (ENSODEG00000016369) #18	ENSODEG00000016221 #17	ENSODEG00000016548	ENTPD7 (ENSODEG00000016776) #19	ENSODEG00000016497 #20	NKX2-3 (ENSODEG00000016861) #21	GOT1 (ENSODEG00000016726) #22	CNNM1 (ENSODEG00000016538) #23	ENSODEG00000016599	HPSE2 (ENSODEG00000016711) #24	HPS1 (ENSODEG00000016655) #25	PYROXD2 (ENSODEG00000016020) #26	LOXL4 (ENSODEG00000016342) #27	ENSODEG00000016477	ENSODEG00000016256 #28	CRTAC1 (ENSODEG00000015999) #29	GOLGA7B (ENSODEG00000016294) #30	SFRP5 (ENSODEG00000016215) #31	ZFYVE27 (ENSODEG00000016383) #32	MARVELD1 (ENSODEG00000016451) #33	AVPI1 (ENSODEG00000016690) #34	PI4K2A (ENSODEG00000016781) #35
Guinea pig	MODERN SPECIES	1	ENSCPOG00000011758 #8	PKD2L1 (ENSCPOG00000010906) #9	BLOC1S2 (ENSCPOG00000039806) #10	CWF19L1 (ENSCPOG00000010890) #11	CHUK (ENSCPOG00000022931) #12	ERLIN1 (ENSCPOG00000026732) #13	ENSCPOG00000026359	CPN1 (ENSCPOG00000000190) #14	DNMBP (ENSCPOG00000005939) #15	ABCC2 (ENSCPOG00000010942) #16	CUTC (ENSCPOG00000010941) #18	COX15 (ENSCPOG00000009783) #17	ENTPD7 (ENSCPOG00000009780) #19	SLC25A28 (ENSCPOG00000036710) #20	NKX2-3 (ENSCPOG00000009772) #21	GOT1 (ENSCPOG00000008633) #22	CNNM1 (ENSCPOG00000008627) #23	ENSCPOG00000020409	HPSE2 (ENSCPOG00000007040) #24	HPS1 (ENSCPOG00000007029) #25	PYROXD2 (ENSCPOG00000007018) #26	LOXL4 (ENSCPOG00000007010) #27	R3HCC1L (ENSCPOG00000007004) #28	CRTAC1 (ENSCPOG00000007832) #29	GOLGA7B (ENSCPOG00000031966) #30	SFRP5 (ENSCPOG00000021880) #31	ENSCPOG00000013283 #32	MARVELD1 (ENSCPOG00000024434) #33	AVPI1 (ENSCPOG00000024508) #34	PI4K2A (ENSCPOG00000004558) #35	MORN4 (ENSCPOG00000031641) #36
Naked mole-rat female	MODERN SPECIES	4	CWF19L1 (ENSHGLG00000018918) #11	CHUK (ENSHGLG00000019084) #12	ERLIN1 (ENSHGLG00000047763) #13	CPN1 (ENSHGLG00000012757) #14	ENSHGLG00000031990	ENSHGLG00000037421	ENSHGLG00000040272	DNMBP (ENSHGLG00000010974) #15	ABCC2 (ENSHGLG00000014313) #16	CUTC (ENSHGLG00000019050) #18	COX15 (ENSHGLG00000041126) #17	ENTPD7 (ENSHGLG00000017820) #19	SLC25A28 (ENSHGLG00000034471) #20	ENSHGLG00000020927	NKX2-3 (ENSHGLG00000042373) #21	GOT1 (ENSHGLG00000010094) #22	CNNM1 (ENSHGLG00000009827) #23	ENSHGLG00000014473 #24	ENSHGLG00000009626	ENSHGLG00000045765	ENSHGLG00000012447	ENSHGLG00000013798 #25	ENSHGLG00000009871 #26	ENSHGLG00000020899	ENSHGLG00000042684 #28	ENSHGLG00000010600 #27	ENSHGLG00000035976	ENSHGLG00000014093	ENSHGLG00000038381	LRRTM3 (ENSHGLG00000016164)	ENSHGLG00000043450
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049709	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37	ENSGT00530000063604.A
Rabbit	MODERN SPECIES	9	ENSOCUG00000014801 #8	ENSOCUG00000037667	ENSOCUG00000001375 #8	PKD2L1 (ENSOCUG00000013146) #9	BLOC1S2 (ENSOCUG00000013141) #10	CHUK (ENSOCUG00000013114) #12	ERLIN1 (ENSOCUG00000026715) #13	ENSOCUG00000024354	CPN1 (ENSOCUG00000002261) #14	DNMBP (ENSOCUG00000002254) #15	ABCC2 (ENSOCUG00000008164) #16	CUTC (ENSOCUG00000003148) #18	COX15 (ENSOCUG00000003143) #17	ENTPD7 (ENSOCUG00000011679) #19	SLC25A28 (ENSOCUG00000011690) #20	GOT1 (ENSOCUG00000012333) #22	CNNM1 (ENSOCUG00000012318) #23	HPSE2 (ENSOCUG00000001638) #24	HPS1 (ENSOCUG00000001633) #25	ENSOCUG00000038615	PYROXD2 (ENSOCUG00000004995) #26	LOXL4 (ENSOCUG00000004988) #27	R3HCC1L (ENSOCUG00000004983) #28	CRTAC1 (ENSOCUG00000004978) #29	GOLGA7B (ENSOCUG00000017860) #30	SFRP5 (ENSOCUG00000021137) #31	ZFYVE27 (ENSOCUG00000001352) #32	MARVELD1 (ENSOCUG00000025329) #33	AVPI1 (ENSOCUG00000007821) #34	PI4K2A (ENSOCUG00000007814) #35	MORN4 (ENSOCUG00000007810) #36
Pika	MODERN SPECIES	606															ENSOPRG00000002368 #21	ENSOPRG00000002345 #22	ENSOPRG00000002329 #23
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Suina	ANCESTRAL SPECIES	6	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Chacoan peccary	MODERN SPECIES	955	SCD (ENSCWAG00000018554) #8	PKD2L1 (ENSCWAG00000018585) #9	BLOC1S2 (ENSCWAG00000018677) #10	CWF19L1 (ENSCWAG00000018713) #11	CHUK (ENSCWAG00000018766) #12	ERLIN1 (ENSCWAG00000018810) #13	ENSCWAG00000018841	CPN1 (ENSCWAG00000018888) #14	DNMBP (ENSCWAG00000018951) #15	ABCC2 (ENSCWAG00000019120) #16	CUTC (ENSCWAG00000019263) #18	COX15 (ENSCWAG00000019302) #17	ENTPD7 (ENSCWAG00000019327) #19	SLC25A28 (ENSCWAG00000019343) #20	NKX2-3 (ENSCWAG00000019366) #21	GOT1 (ENSCWAG00000019394) #22	CNNM1 (ENSCWAG00000019424) #23	HPSE2 (ENSCWAG00000019523) #24	HPS1 (ENSCWAG00000020101) #25	PYROXD2 (ENSCWAG00000020183) #26	LOXL4 (ENSCWAG00000020224) #27	R3HCC1L (ENSCWAG00000020239) #28	CRTAC1 (ENSCWAG00000020281) #29	GOLGA7B (ENSCWAG00000011885) #30	SFRP5 (ENSCWAG00000011979) #31	ZFYVE27 (ENSCWAG00000012082) #32	MARVELD1 (ENSCWAG00000012717) #33	AVPI1 (ENSCWAG00000012736) #34	PI4K2A (ENSCWAG00000012772) #35	MORN4 (ENSCWAG00000012823) #36	HOGA1 (ENSCWAG00000012895)
Pig	MODERN SPECIES	5	SCD (ENSSSCG00000010554) #8	PKD2L1 (ENSSSCG00000010552) #9	BLOC1S2 (ENSSSCG00000010551) #10	CWF19L1 (ENSSSCG00000010550) #11	CHUK (ENSSSCG00000010548) #12	ENSSSCG00000010546	ENSSSCG00000058016	CPN1 (ENSSSCG00000010545) #14	DNMBP (ENSSSCG00000010544) #15	ABCC2 (ENSSSCG00000010543) #16	CUTC (ENSSSCG00000010542) #18	COX15 (ENSSSCG00000010541) #17	ENTPD7 (ENSSSCG00000010540) #19	SLC25A28 (ENSSSCG00000037536) #20	NKX2-3 (ENSSSCG00000010538) #21	GOT1 (ENSSSCG00000010537) #22	CNNM1 (ENSSSCG00000010536) #23	HPSE2 (ENSSSCG00000010535) #24	HPS1 (ENSSSCG00000010534) #25	PYROXD2 (ENSSSCG00000010533) #26	LOXL4 (ENSSSCG00000010532) #27	ENSSSCG00000010531 #28	CRTAC1 (ENSSSCG00000010530) #29	GOLGA7B (ENSSSCG00000040359) #30	SFRP5 (ENSSSCG00000010529) #31	ZFYVE27 (ENSSSCG00000010528) #32	MARVELD1 (ENSSSCG00000010527) #33	AVPI1 (ENSSSCG00000036824) #34	PI4K2A (ENSSSCG00000010525) #35	MORN4 (ENSSSCG00000036954) #36	HOGA1 (ENSSSCG00000010523)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Cetacea	ANCESTRAL SPECIES	15	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00950000182965.b.ab	ENSGT00940000158235 #14	ENSGT00950000183178.b.a.kb	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00950000182965.b.ab	ENSGT00940000158235 #14	ENSGT00950000183178.b.a.kb	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00950000182965.b.ab	ENSGT00940000158235 #14	ENSGT00950000183178.b.a.kb	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00950000182922.a.b.e.b	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00950000182965.b.`b.a	ENSGT00940000158235 #14	ENSGT00950000183178.b.a.kb	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00950000182922.a.b.e.b	ENSGT00940000157556 #21	ENSGT00390000005254.i.a.b.d.a.a.b	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Beluga whale	MODERN SPECIES	65	CHUK (ENSDLEG00000016724) #12	ERLIN1 (ENSDLEG00000016752) #13	ENSDLEG00000016762	ENSDLEG00000016781	CPN1 (ENSDLEG00000016805) #14	DNMBP (ENSDLEG00000016839) #15	ENSDLEG00000016877	ABCC2 (ENSDLEG00000017009) #16	CUTC (ENSDLEG00000018572) #18	COX15 (ENSDLEG00000018589) #17	ENTPD7 (ENSDLEG00000018599) #19	SLC25A28 (ENSDLEG00000018615) #20	ENSDLEG00000018620	NKX2-3 (ENSDLEG00000018624) #21	ENSDLEG00000018627	GOT1 (ENSDLEG00000018631) #22	CNNM1 (ENSDLEG00000018642) #23	ENSDLEG00000018658 #24	HPSE2 (ENSDLEG00000018666) #24	HPS1 (ENSDLEG00000018728) #25	PYROXD2 (ENSDLEG00000019317) #26	LOXL4 (ENSDLEG00000019384) #27	R3HCC1L (ENSDLEG00000019396) #28	CRTAC1 (ENSDLEG00000015410) #29	GOLGA7B (ENSDLEG00000015445) #30	ENSDLEG00000015480	SFRP5 (ENSDLEG00000015488) #31	ZFYVE27 (ENSDLEG00000015495) #32	MARVELD1 (ENSDLEG00000015515) #33	AVPI1 (ENSDLEG00000015521) #34	PI4K2A (ENSDLEG00000015532) #35
Narwhal	MODERN SPECIES	311	CHUK (ENSMMNG00015021819) #12	ERLIN1 (ENSMMNG00015021807) #13	ENSMMNG00015021772	ENSMMNG00015021751	CPN1 (ENSMMNG00015021745) #14	ENSMMNG00015021741	DNMBP (ENSMMNG00015021703) #15	ABCC2 (ENSMMNG00015021666) #16	CUTC (ENSMMNG00015021646) #18	COX15 (ENSMMNG00015021631) #17	ENTPD7 (ENSMMNG00015021616) #19	SLC25A28 (ENSMMNG00015021609) #20	ENSMMNG00015021602	NKX2-3 (ENSMMNG00015021590) #21	ENSMMNG00015021579	GOT1 (ENSMMNG00015021565) #22	CNNM1 (ENSMMNG00015021551) #23	HPSE2 (ENSMMNG00015021406) #24	HPS1 (ENSMMNG00015021292) #25	PYROXD2 (ENSMMNG00015021259) #26	LOXL4 (ENSMMNG00015021234) #27	R3HCC1L (ENSMMNG00015021199) #28	CRTAC1 (ENSMMNG00015021140) #29	GOLGA7B (ENSMMNG00015021091) #30	ENSMMNG00015021065	SFRP5 (ENSMMNG00015021053) #31	ZFYVE27 (ENSMMNG00015020926) #32	MARVELD1 (ENSMMNG00015020866) #33	AVPI1 (ENSMMNG00015020853) #34	PI4K2A (ENSMMNG00015020825) #35	MORN4 (ENSMMNG00015020795) #36
Vaquita	MODERN SPECIES	7	CWF19L1 (ENSPSNG00000011631) #11	CHUK (ENSPSNG00000011567) #12	ERLIN1 (ENSPSNG00000011494) #13	ENSPSNG00000011395	ENSPSNG00000011294	CPN1 (ENSPSNG00000011204) #14	ENSPSNG00000011167	DNMBP (ENSPSNG00000010680) #15	ABCC2 (ENSPSNG00000010279) #16	CUTC (ENSPSNG00000010192) #18	COX15 (ENSPSNG00000021978) #17	ENTPD7 (ENSPSNG00000021961) #19	SLC25A28 (ENSPSNG00000021946) #20	ENSPSNG00000021934	NKX2-3 (ENSPSNG00000021922) #21	GOT1 (ENSPSNG00000021906) #22	CNNM1 (ENSPSNG00000021881) #23	HPSE2 (ENSPSNG00000021752) #24	HPS1 (ENSPSNG00000021605) #25	LOXL4 (ENSPSNG00000021534) #27	R3HCC1L (ENSPSNG00000021458) #28	CRTAC1 (ENSPSNG00000021304) #29	GOLGA7B (ENSPSNG00000021258) #30	SFRP5 (ENSPSNG00000021235) #31	ZFYVE27 (ENSPSNG00000021039) #32	MARVELD1 (ENSPSNG00000020968) #33	AVPI1 (ENSPSNG00000020938) #34	PI4K2A (ENSPSNG00000020904) #35	MORN4 (ENSPSNG00000020862) #36	HOGA1 (ENSPSNG00000020786)	ANKRD2 (ENSPSNG00000020585)
Dolphin	MODERN SPECIES	41															NKX2-3 (ENSTTRG00000002171) #21	GOT1 (ENSTTRG00000002165) #22	CNNM1 (ENSTTRG00000002161) #23
Sperm whale	MODERN SPECIES	12	ERLIN1 (ENSPCTG00005017152) #13	ENSPCTG00005017133	ENSPCTG00005017035	ENSPCTG00005016969	ENSPCTG00005016952	CPN1 (ENSPCTG00005016823) #14	ENSPCTG00005016793	DNMBP (ENSPCTG00005016252) #15	ABCC2 (ENSPCTG00005015837) #16	CUTC (ENSPCTG00005015684) #18	COX15 (ENSPCTG00005015651) #17	ENTPD7 (ENSPCTG00005015609) #19	SLC25A28 (ENSPCTG00005015533) #20	ENSPCTG00005015512	NKX2-3 (ENSPCTG00005015458) #21	GOT1 (ENSPCTG00005015383) #22	CNNM1 (ENSPCTG00005015224) #23	HPSE2 (ENSPCTG00005014453) #24	ENSPCTG00005014329 #25	R3HCC1L (ENSPCTG00005014293) #28	SFRP5 (ENSPCTG00005014239) #31	ZFYVE27 (ENSPCTG00005013655) #32	MARVELD1 (ENSPCTG00005013584) #33	AVPI1 (ENSPCTG00005013541) #34	PI4K2A (ENSPCTG00005013487) #35	ENSPCTG00005013431	PGAM1 (ENSPCTG00005013367)	EXOSC1 (ENSPCTG00005013217)	ZDHHC16 (ENSPCTG00005012891)	MMS19 (ENSPCTG00005012756)	RRP12 (ENSPCTG00005011281)
Blue whale	MODERN SPECIES	7	CWF19L1 (ENSBMSG00010020350) #11	CHUK (ENSBMSG00010020396) #12	ERLIN1 (ENSBMSG00010020428) #13	ENSBMSG00010020464	ENSBMSG00010020488	CPN1 (ENSBMSG00010020507) #14	DNMBP (ENSBMSG00010020572) #15	ENSBMSG00010020666	ENSBMSG00010020695 #16	ENSBMSG00010020724 #16	CUTC (ENSBMSG00010020742) #18	COX15 (ENSBMSG00010020776) #17	ENTPD7 (ENSBMSG00010020812) #19	SLC25A28 (ENSBMSG00010020858) #20	NKX2-3 (ENSBMSG00010020878) #21	GOT1 (ENSBMSG00010020897) #22	CNNM1 (ENSBMSG00010020911) #23	HPSE2 (ENSBMSG00010020945) #24	ENSBMSG00010020978	HPS1 (ENSBMSG00010021004) #25	PYROXD2 (ENSBMSG00010021039) #26	LOXL4 (ENSBMSG00010021080) #27	R3HCC1L (ENSBMSG00010021112) #28	CRTAC1 (ENSBMSG00010021195) #29	ZFYVE27 (ENSBMSG00010021315) #32	ENSBMSG00010021433	SFRP5 (ENSBMSG00010021454) #31	MARVELD1 (ENSBMSG00010021463) #33	AVPI1 (ENSBMSG00010021470) #34	PI4K2A (ENSBMSG00010021477) #35	ENSBMSG00010021499 #36
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889.j #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889.j #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889.j #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Caprinae	ANCESTRAL SPECIES	19	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889.j #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Rambouillet Sheep	MODERN SPECIES	14	PKD2L1 (ENSOARG00020023638) #9	ENSOARG00020023608 #10	CWF19L1 (ENSOARG00020023576) #11	CHUK (ENSOARG00020023504) #12	ERLIN1 (ENSOARG00020023462) #13	ENSOARG00020023442	ENSOARG00020023363	CPN1 (ENSOARG00020023321) #14	DNMBP (ENSOARG00020023124) #15	ABCC2 (ENSOARG00020023009) #16	CUTC (ENSOARG00020022982) #18	COX15 (ENSOARG00020022953) #17	ENTPD7 (ENSOARG00020022923) #19	SLC25A28 (ENSOARG00020022896) #20	NKX2-3 (ENSOARG00020022879) #21	GOT1 (ENSOARG00020022840) #22	CNNM1 (ENSOARG00020022788) #23	HPSE2 (ENSOARG00020022137) #24	HPS1 (ENSOARG00020021926) #25	PYROXD2 (ENSOARG00020021749) #26	LOXL4 (ENSOARG00020021636) #27	CRTAC1 (ENSOARG00020020932) #29	GOLGA7B (ENSOARG00020020851) #30	SFRP5 (ENSOARG00020020728) #31	ZFYVE27 (ENSOARG00020019673) #32	ENSOARG00020019627	MARVELD1 (ENSOARG00020019607) #33	AVPI1 (ENSOARG00020019577) #34	PI4K2A (ENSOARG00020019502) #35	MORN4 (ENSOARG00020019435) #36	HOGA1 (ENSOARG00020019351)
Goat	MODERN SPECIES	18	PKD2L1 (ENSCHIG00000011550) #9	BLOC1S2 (ENSCHIG00000012162) #10	CWF19L1 (ENSCHIG00000022368) #11	CHUK (ENSCHIG00000017053) #12	ERLIN1 (ENSCHIG00000021174) #13	ENSCHIG00000024200	ENSCHIG00000002220	CPN1 (ENSCHIG00000006379) #14	DNMBP (ENSCHIG00000012404) #15	ABCC2 (ENSCHIG00000023862) #16	CUTC (ENSCHIG00000003099) #18	COX15 (ENSCHIG00000020850) #17	ENTPD7 (ENSCHIG00000010544) #19	SLC25A28 (ENSCHIG00000012444) #20	NKX2-3 (ENSCHIG00000017672) #21	GOT1 (ENSCHIG00000024327) #22	CNNM1 (ENSCHIG00000021440) #23	HPSE2 (ENSCHIG00000007017) #24	HPS1 (ENSCHIG00000015465) #25	PYROXD2 (ENSCHIG00000012022) #26	LOXL4 (ENSCHIG00000023220) #27	R3HCC1L (ENSCHIG00000015278) #28	CRTAC1 (ENSCHIG00000021520) #29	GOLGA7B (ENSCHIG00000020686) #30	SFRP5 (ENSCHIG00000024678) #31	ZFYVE27 (ENSCHIG00000015749) #32	MARVELD1 (ENSCHIG00000019321) #33	AVPI1 (ENSCHIG00000014474) #34	PI4K2A (ENSCHIG00000019481) #35	MORN4 (ENSCHIG00000015248) #36	HOGA1 (ENSCHIG00000018410)
Bovinae	ANCESTRAL SPECIES	22	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889.j #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Bos	ANCESTRAL SPECIES	23	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889.j #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741.d #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889.j #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741.d #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Domestic yak	MODERN SPECIES	17	ENSBGRG00000024209	PKD2L1 (ENSBGRG00000024114) #9	BLOC1S2 (ENSBGRG00000024074) #10	CWF19L1 (ENSBGRG00000023954) #11	CHUK (ENSBGRG00000023732) #12	ERLIN1 (ENSBGRG00000023679) #13	ENSBGRG00000023587	CPN1 (ENSBGRG00000023508) #14	DNMBP (ENSBGRG00000023150) #15	ABCC2 (ENSBGRG00000022859) #16	CUTC (ENSBGRG00000022756) #18	COX15 (ENSBGRG00000022480) #17	ENTPD7 (ENSBGRG00000022394) #19	SLC25A28 (ENSBGRG00000022344) #20	NKX2-3 (ENSBGRG00000022317) #21	GOT1 (ENSBGRG00000022227) #22	CNNM1 (ENSBGRG00000021985) #23	ENSBGRG00000021941	HPSE2 (ENSBGRG00000021306) #24	HPS1 (ENSBGRG00000020843) #25	PYROXD2 (ENSBGRG00000020702) #26	LOXL4 (ENSBGRG00000020559) #27	ENSBGRG00000020536	ENSBGRG00000020483 #28	CRTAC1 (ENSBGRG00000020315) #29	GOLGA7B (ENSBGRG00000020042) #30	SFRP5 (ENSBGRG00000019974) #31	ZFYVE27 (ENSBGRG00000019044) #32	MARVELD1 (ENSBGRG00000018953) #33	AVPI1 (ENSBGRG00000018935) #34	PI4K2A (ENSBGRG00000018890) #35
Wild yak	MODERN SPECIES	459	SCD (ENSBMUG00000017541) #8	PKD2L1 (ENSBMUG00000017631) #9	BLOC1S2 (ENSBMUG00000017651) #10	CWF19L1 (ENSBMUG00000017670) #11	CHUK (ENSBMUG00000017775) #12	ERLIN1 (ENSBMUG00000017806) #13	ENSBMUG00000017924	CPN1 (ENSBMUG00000018051) #14	DNMBP (ENSBMUG00000018089) #15	ABCC2 (ENSBMUG00000018169) #16	CUTC (ENSBMUG00000018195) #18	COX15 (ENSBMUG00000018209) #17	ENTPD7 (ENSBMUG00000018228) #19	SLC25A28 (ENSBMUG00000018239) #20	NKX2-3 (ENSBMUG00000018255) #21	GOT1 (ENSBMUG00000018263) #22	CNNM1 (ENSBMUG00000018287) #23	ENSBMUG00000018304 #24
Bos_b	ANCESTRAL SPECIES	23	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889.j #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741.d #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Cow	MODERN SPECIES	18	ENSBTAG00000027715	PKD2L1 (ENSBTAG00000010742) #9	BLOC1S2 (ENSBTAG00000010739) #10	CWF19L1 (ENSBTAG00000007594) #11	CHUK (ENSBTAG00000007591) #12	ERLIN1 (ENSBTAG00000007588) #13	CYP2C23 (ENSBTAG00000023939)	CPN1 (ENSBTAG00000023941) #14	DNMBP (ENSBTAG00000008939) #15	ABCC2 (ENSBTAG00000008936) #16	CUTC (ENSBTAG00000002971) #18	COX15 (ENSBTAG00000045703) #17	ENTPD7 (ENSBTAG00000047077) #19	SLC25A28 (ENSBTAG00000012107) #20	NKX2-3 (ENSBTAG00000021397) #21	GOT1 (ENSBTAG00000011960) #22	CNNM1 (ENSBTAG00000011956) #23	ENSBTAG00000050951 #24	ENSBTAG00000052639	HPSE2 (ENSBTAG00000054120) #24	HPS1 (ENSBTAG00000014314) #25	PYROXD2 (ENSBTAG00000014313) #26	LOXL4 (ENSBTAG00000020895) #27	R3HCC1L (ENSBTAG00000021856) #28	CRTAC1 (ENSBTAG00000008102) #29	GOLGA7B (ENSBTAG00000008100) #30	SFRP5 (ENSBTAG00000018566) #31	ZFYVE27 (ENSBTAG00000018564) #32	MARVELD1 (ENSBTAG00000013478) #33	AVPI1 (ENSBTAG00000023947) #34	PI4K2A (ENSBTAG00000002010) #35
Hybrid Bos Indicus	MODERN SPECIES	18	ENSBIXG00005011185	ENSBIXG00005001032	ENSBIXG00005011167 #10	CWF19L1 (ENSBIXG00005001023) #11	CHUK (ENSBIXG00005011090) #12	ERLIN1 (ENSBIXG00005001006) #13	ENSBIXG00005010965	CPN1 (ENSBIXG00005000570) #14	DNMBP (ENSBIXG00005010920) #15	ABCC2 (ENSBIXG00005000623) #16	CUTC (ENSBIXG00005000919) #18	COX15 (ENSBIXG00005010651) #17	ENTPD7 (ENSBIXG00005010635) #19	SLC25A28 (ENSBIXG00005010613) #20	NKX2-3 (ENSBIXG00005010599) #21	GOT1 (ENSBIXG00005000692) #22	CNNM1 (ENSBIXG00005006993) #23	HPSE2 (ENSBIXG00005010419) #24	HPS1 (ENSBIXG00005000811) #25	PYROXD2 (ENSBIXG00005010212) #26	LOXL4 (ENSBIXG00005010186) #27	R3HCC1L (ENSBIXG00005010153) #28	ENSBIXG00005010106	CRTAC1 (ENSBIXG00005010075) #29	ZFYVE27 (ENSBIXG00005000645) #32	SFRP5 (ENSBIXG00005009770) #31	PI4K2A (ENSBIXG00005006986) #35	AVPI1 (ENSBIXG00005009706) #34	MORN4 (ENSBIXG00005000550) #36	HOGA1 (ENSBIXG00005009628)	ANKRD2 (ENSBIXG00005009522)
American bison	MODERN SPECIES	3316	SCD (ENSBBBG00000020991) #8	PKD2L1 (ENSBBBG00000020976) #9	BLOC1S2 (ENSBBBG00000006915) #10	CWF19L1 (ENSBBBG00000020870) #11	CHUK (ENSBBBG00000005609) #12	ERLIN1 (ENSBBBG00000020806) #13	ENSBBBG00000020764	CPN1 (ENSBBBG00000020710) #14	DNMBP (ENSBBBG00000008616) #15	ABCC2 (ENSBBBG00000020631) #16	CUTC (ENSBBBG00000020570) #18	COX15 (ENSBBBG00000020431) #17	ENTPD7 (ENSBBBG00000007516) #19	SLC25A28 (ENSBBBG00000000522) #20	NKX2-3 (ENSBBBG00000000532) #21	GOT1 (ENSBBBG00000000537) #22	CNNM1 (ENSBBBG00000000548) #23	ENSBBBG00000000558 #24
Siberian musk deer	MODERN SPECIES	1162	SCD (ENSMMSG00000018540) #8	PKD2L1 (ENSMMSG00000018586) #9	ENSMMSG00000018776 #10	CWF19L1 (ENSMMSG00000018813) #11	ENSMMSG00000018864 #12	ERLIN1 (ENSMMSG00000018996) #13	ENSMMSG00000019076	CPN1 (ENSMMSG00000019165) #14	DNMBP (ENSMMSG00000019235) #15	ABCC2 (ENSMMSG00000019363) #16	CUTC (ENSMMSG00000019530) #18	COX15 (ENSMMSG00000019557) #17	ENTPD7 (ENSMMSG00000019589) #19	SLC25A28 (ENSMMSG00000019614) #20	NKX2-3 (ENSMMSG00000019646) #21	GOT1 (ENSMMSG00000019669) #22	CNNM1 (ENSMMSG00000019701) #23	ENSMMSG00000019749 #24
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	6	BLOC1S2 (ENSCHYG00000006943) #10	CWF19L1 (ENSCHYG00000006851) #11	ENSCHYG00000006832	CHUK (ENSCHYG00000006784) #12	ERLIN1 (ENSCHYG00000006724) #13	ENSCHYG00000006656	CPN1 (ENSCHYG00000006610) #14	DNMBP (ENSCHYG00000006445) #15	ABCC2 (ENSCHYG00000006324) #16	ENSCHYG00000006294	CUTC (ENSCHYG00000006242) #18	COX15 (ENSCHYG00000006179) #17	ENTPD7 (ENSCHYG00000006056) #19	SLC25A28 (ENSCHYG00000006008) #20	NKX2-3 (ENSCHYG00000005991) #21	ENSCHYG00000005946 #22	CNNM1 (ENSCHYG00000005721) #23	HPSE2 (ENSCHYG00000005569) #24	HPS1 (ENSCHYG00000005361) #25	PYROXD2 (ENSCHYG00000005123) #26	ENSCHYG00000005075	LOXL4 (ENSCHYG00000005041) #27	R3HCC1L (ENSCHYG00000004994) #28	CRTAC1 (ENSCHYG00000004903) #29	ENSCHYG00000004880	SFRP5 (ENSCHYG00000004868) #31	ZFYVE27 (ENSCHYG00000004712) #32	MARVELD1 (ENSCHYG00000004459) #33	AVPI1 (ENSCHYG00000004424) #34	PI4K2A (ENSCHYG00000021371) #35	MORN4 (ENSCHYG00000021303) #36
Yarkand deer	MODERN SPECIES	6	ENSCHYG00000006068	TET1 (ENSCHYG00000005993)	SLC25A16 (ENSCHYG00000005961)	DNA2 (ENSCHYG00000005873)	ENSCHYG00000005831	RUFY2 (ENSCHYG00000005352)	HNRNPH3 (ENSCHYG00000005187)	PBLD (ENSCHYG00000026547)	ATOH7 (ENSCHYG00000026539)	MYPN (ENSCHYG00000026483)	HERC4 (ENSCHYG00000026123)	SIRT1 (ENSCHYG00000026011)	DNAJC12 (ENSCHYG00000025961)	LRRTM3 (ENSCHYG00000025928)	CTNNA3 (ENSCHYG00000025898)	ENSCHYG00000025886 #22	REEP3 (ENSCHYG00000025849)	JMJD1C (ENSCHYG00000025503)	ENSCHYG00000025450	EGR2 (ENSCHYG00000025433)	ADO (ENSCHYG00000025417)	ZNF365 (ENSCHYG00000025396)	ENSCHYG00000025380	RTKN2 (ENSCHYG00000025340)	ARID5B (ENSCHYG00000025278)	ENSCHYG00000025249	ENSCHYG00000025219	ENSCHYG00000025136	ENSCHYG00000025085	ENSCHYG00000025062	ENSCHYG00000023912
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Alpaca	MODERN SPECIES	3455										CPN1 (ENSVPAG00000005013) #14	DNMBP (ENSVPAG00000005006) #15	ABCC2 (ENSVPAG00000005004) #16	CUTC (ENSVPAG00000005003) #18	COX15 (ENSVPAG00000005001) #17	ENTPD7 (ENSVPAG00000005000) #19	GOT1 (ENSVPAG00000004999) #22	CNNM1 (ENSVPAG00000004998) #23	HPSE2 (ENSVPAG00000004997) #24	ENSVPAG00000004996 #25
Arabian camel	MODERN SPECIES	2	SCD (ENSCDRG00005019165) #8	PKD2L1 (ENSCDRG00005019183) #9	BLOC1S2 (ENSCDRG00005019254) #10	CWF19L1 (ENSCDRG00005019282) #11	CHUK (ENSCDRG00005019321) #12	ERLIN1 (ENSCDRG00005019412) #13	ENSCDRG00005019453	CPN1 (ENSCDRG00005003276) #14	DNMBP (ENSCDRG00005003309) #15	ABCC2 (ENSCDRG00005003408) #16	CUTC (ENSCDRG00005003453) #18	COX15 (ENSCDRG00005003507) #17	ENTPD7 (ENSCDRG00005003625) #19	SLC25A28 (ENSCDRG00005003655) #20	NKX2-3 (ENSCDRG00005003725) #21	GOT1 (ENSCDRG00005003760) #22	CNNM1 (ENSCDRG00005003816) #23	HPSE2 (ENSCDRG00005003939) #24	HPS1 (ENSCDRG00005004078) #25	PYROXD2 (ENSCDRG00005004408) #26	LOXL4 (ENSCDRG00005004555) #27	R3HCC1L (ENSCDRG00005004585) #28	CRTAC1 (ENSCDRG00005004684) #29	GOLGA7B (ENSCDRG00005004929) #30	SFRP5 (ENSCDRG00005004990) #31	ZFYVE27 (ENSCDRG00005005050) #32	MARVELD1 (ENSCDRG00005005688) #33	AVPI1 (ENSCDRG00005005710) #34	PI4K2A (ENSCDRG00005005722) #35	MORN4 (ENSCDRG00005005757) #36	HOGA1 (ENSCDRG00005005801)
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Microbat	MODERN SPECIES	1003							DNMBP (ENSMLUG00000012676) #15	ABCC2 (ENSMLUG00000013008) #16	ENSMLUG00000010337	ENSMLUG00000023141	CUTC (ENSMLUG00000013004) #18	COX15 (ENSMLUG00000012997) #17	ENTPD7 (ENSMLUG00000012990) #19	SLC25A28 (ENSMLUG00000003248) #20	NKX2-3 (ENSMLUG00000012413) #21	GOT1 (ENSMLUG00000007333) #22	CNNM1 (ENSMLUG00000007307) #23	ENSMLUG00000026702 #24	ENSMLUG00000007302	ENSMLUG00000007280 #24	HPS1 (ENSMLUG00000007252) #25	PYROXD2 (ENSMLUG00000007227) #26	LOXL4 (ENSMLUG00000000434) #27	R3HCC1L (ENSMLUG00000000430) #28	ENSMLUG00000023911	CRTAC1 (ENSMLUG00000015981) #29	GOLGA7B (ENSMLUG00000015977) #30	SFRP5 (ENSMLUG00000025702) #31	ZFYVE27 (ENSMLUG00000009377) #32	AVPI1 (ENSMLUG00000028157) #34	PI4K2A (ENSMLUG00000028240) #35
Greater horseshoe bat	MODERN SPECIES	7	PKD2L1 (ENSRFEG00010008124) #9	BLOC1S2 (ENSRFEG00010008151) #10	CWF19L1 (ENSRFEG00010008209) #11	CHUK (ENSRFEG00010008270) #12	ERLIN1 (ENSRFEG00010008321) #13	ENSRFEG00010008364	CPN1 (ENSRFEG00010008391) #14	DNMBP (ENSRFEG00010008477) #15	ABCC2 (ENSRFEG00010008701) #16	CUTC (ENSRFEG00010008821) #18	COX15 (ENSRFEG00010008880) #17	ENTPD7 (ENSRFEG00010008932) #19	ENSRFEG00010008955	SLC25A28 (ENSRFEG00010008966) #20	NKX2-3 (ENSRFEG00010009017) #21	GOT1 (ENSRFEG00010009053) #22	CNNM1 (ENSRFEG00010009120) #23	HPSE2 (ENSRFEG00010009250) #24	HPS1 (ENSRFEG00010009844) #25	PYROXD2 (ENSRFEG00010009945) #26	LOXL4 (ENSRFEG00010010101) #27	R3HCC1L (ENSRFEG00010010169) #28	CRTAC1 (ENSRFEG00010010283) #29	ENSRFEG00010010438	GOLGA7B (ENSRFEG00010010476) #30	SFRP5 (ENSRFEG00010010565) #31	ZFYVE27 (ENSRFEG00010010662) #32	MARVELD1 (ENSRFEG00010011202) #33	AVPI1 (ENSRFEG00010011224) #34	PI4K2A (ENSRFEG00010011240) #35	MORN4 (ENSRFEG00010011280) #36
Megabat	MODERN SPECIES	193															NKX2-3 (ENSPVAG00000008891) #21	GOT1 (ENSPVAG00000008890) #22	CNNM1 (ENSPVAG00000008889) #23
Equus	ANCESTRAL SPECIES	9	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Donkey	MODERN SPECIES	11	BLOC1S2 (ENSEASG00005035216) #10	CWF19L1 (ENSEASG00005009032) #11	CHUK (ENSEASG00005009284) #12	ERLIN1 (ENSEASG00005009396) #13	ENSEASG00005026076	ENSEASG00005009611	CPN1 (ENSEASG00005009613) #14	DNMBP (ENSEASG00005009614) #15	ABCC2 (ENSEASG00005009680) #16	CUTC (ENSEASG00005010008) #18	COX15 (ENSEASG00005010011) #17	ENTPD7 (ENSEASG00005010015) #19	SLC25A28 (ENSEASG00005036136) #20	ENSEASG00005010107	NKX2-3 (ENSEASG00005010109) #21	GOT1 (ENSEASG00005010111) #22	CNNM1 (ENSEASG00005010116) #23	HPSE2 (ENSEASG00005008341) #24	ENSEASG00005007924	HPS1 (ENSEASG00005008377) #25	PYROXD2 (ENSEASG00005008622) #26	LOXL4 (ENSEASG00005008627) #27	R3HCC1L (ENSEASG00005008634) #28	CRTAC1 (ENSEASG00005008642) #29	GOLGA7B (ENSEASG00005008652) #30	SFRP5 (ENSEASG00005027560) #31	ZFYVE27 (ENSEASG00005008657) #32	MARVELD1 (ENSEASG00005008661) #33	AVPI1 (ENSEASG00005008664) #34	PI4K2A (ENSEASG00005008665) #35	MORN4 (ENSEASG00005034389) #36
Horse	MODERN SPECIES		PKD2L1 (ENSECAG00000023606) #9	BLOC1S2 (ENSECAG00000013421) #10	CWF19L1 (ENSECAG00000016333) #11	CHUK (ENSECAG00000006588) #12	ERLIN1 (ENSECAG00000043715) #13	CYP2C23 (ENSECAG00000024865)	ENSECAG00000049976	CPN1 (ENSECAG00000024087) #14	DNMBP (ENSECAG00000010813) #15	ABCC2 (ENSECAG00000019828) #16	CUTC (ENSECAG00000006891) #18	COX15 (ENSECAG00000014039) #17	ENTPD7 (ENSECAG00000020147) #19	SLC25A28 (ENSECAG00000009356) #20	NKX2-3 (ENSECAG00000000092) #21	GOT1 (ENSECAG00000000095) #22	CNNM1 (ENSECAG00000000257) #23	HPSE2 (ENSECAG00000000353) #24	ENSECAG00000009538	ENSECAG00000058422	HPS1 (ENSECAG00000000393) #25	PYROXD2 (ENSECAG00000003748) #26	R3HCC1L (ENSECAG00000006861) #28	LOXL4 (ENSECAG00000005573) #27	CRTAC1 (ENSECAG00000007097) #29	GOLGA7B (ENSECAG00000007985) #30	SFRP5 (ENSECAG00000026876) #31	ZFYVE27 (ENSECAG00000008070) #32	MARVELD1 (ENSECAG00000035735) #33	AVPI1 (ENSECAG00000008293) #34	PI4K2A (ENSECAG00000008327) #35
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000160584 #7	ENSGT00940000154908.d #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000015060.e.b.a	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Ursus	ANCESTRAL SPECIES	7	ENSGT00940000160584 #7	ENSGT00940000154908.d #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000015060.e.b.a	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Polar bear	MODERN SPECIES	92	SEC31B (ENSUMAG00000022806)	SCD (ENSUMAG00000022802) #8	PKD2L1 (ENSUMAG00000022795) #9	BLOC1S2 (ENSUMAG00000022792) #10	CWF19L1 (ENSUMAG00000022786) #11	CHUK (ENSUMAG00000022784) #12	ERLIN1 (ENSUMAG00000022782) #13	CPN1 (ENSUMAG00000022776) #14	DNMBP (ENSUMAG00000022748) #15	ENSUMAG00000022738	ABCC2 (ENSUMAG00000022691) #16	CUTC (ENSUMAG00000022679) #18	COX15 (ENSUMAG00000022676) #17	ENTPD7 (ENSUMAG00000022662) #19	SLC25A28 (ENSUMAG00000022646) #20	GOT1 (ENSUMAG00000022640) #22	ENSUMAG00000022637 #23	ENSUMAG00000022634 #24	ENSUMAG00000022632	ENSUMAG00000022628	ENSUMAG00000022623 #24	HPS1 (ENSUMAG00000022592) #25	PYROXD2 (ENSUMAG00000022551) #26	LOXL4 (ENSUMAG00000022540) #27	R3HCC1L (ENSUMAG00000022536) #28	CRTAC1 (ENSUMAG00000022534) #29	GOLGA7B (ENSUMAG00000022532) #30	ZFYVE27 (ENSUMAG00000022526) #32	AVPI1 (ENSUMAG00000022522) #34	PI4K2A (ENSUMAG00000022461) #35	MORN4 (ENSUMAG00000022435) #36
American black bear	MODERN SPECIES	953								DNMBP (ENSUAMG00000024205) #15	ENSUAMG00000024203	ABCC2 (ENSUAMG00000024202) #16	CUTC (ENSUAMG00000024201) #18	COX15 (ENSUAMG00000024200) #17	ENTPD7 (ENSUAMG00000024199) #19	SLC25A28 (ENSUAMG00000024196) #20	NKX2-3 (ENSUAMG00000024195) #21	GOT1 (ENSUAMG00000024194) #22	ENSUAMG00000024193 #23
Giant Panda	MODERN SPECIES	16	SCD (ENSAMEG00000006735) #8	PKD2L1 (ENSAMEG00000006758) #9	BLOC1S2 (ENSAMEG00000006802) #10	CWF19L1 (ENSAMEG00000006811) #11	CHUK (ENSAMEG00000006839) #12	ENSAMEG00000006951 #13	ENSAMEG00000029309	DNMBP (ENSAMEG00000006999) #15	ENSAMEG00000024466	ABCC2 (ENSAMEG00000007018) #16	CUTC (ENSAMEG00000007211) #18	COX15 (ENSAMEG00000007219) #17	ENTPD7 (ENSAMEG00000007233) #19	SLC25A28 (ENSAMEG00000007268) #20	NKX2-3 (ENSAMEG00000029439) #21	GOT1 (ENSAMEG00000003623) #22	CNNM1 (ENSAMEG00000025498) #23	ENSAMEG00000030373	HPSE2 (ENSAMEG00000000060) #24	HPS1 (ENSAMEG00000000061) #25	PYROXD2 (ENSAMEG00000000072) #26	LOXL4 (ENSAMEG00000000074) #27	R3HCC1L (ENSAMEG00000000078) #28	GOLGA7B (ENSAMEG00000000088) #30	CRTAC1 (ENSAMEG00000000081) #29	SFRP5 (ENSAMEG00000000089) #31	ZFYVE27 (ENSAMEG00000000090) #32	MARVELD1 (ENSAMEG00000000095) #33	ENSAMEG00000000096 #34	PI4K2A (ENSAMEG00000000097) #35	MORN4 (ENSAMEG00000000101) #36
Mustelinae	ANCESTRAL SPECIES	29	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
American mink	MODERN SPECIES	25	SCD (ENSNVIG00000018947) #8	PKD2L1 (ENSNVIG00000018963) #9	BLOC1S2 (ENSNVIG00000018993) #10	CWF19L1 (ENSNVIG00000019007) #11	CHUK (ENSNVIG00000019034) #12	ERLIN1 (ENSNVIG00000019050) #13	CPN1 (ENSNVIG00000019110) #14	DNMBP (ENSNVIG00000019147) #15	ABCC2 (ENSNVIG00000019248) #16	ENSNVIG00000019358	CUTC (ENSNVIG00000019369) #18	COX15 (ENSNVIG00000019404) #17	ENTP7 (ENSNVIG00000019452) #19	SLC25A28 (ENSNVIG00000019475) #20	NKX2-3 (ENSNVIG00000019485) #21	GOT1 (ENSNVIG00000019493) #22	CNNM1 (ENSNVIG00000019501) #23	HPSE2 (ENSNVIG00000019528) #24	ENSNVIG00000019609	HPS1 (ENSNVIG00000019617) #25	PYROXD2 (ENSNVIG00000019708) #26	LOXL4 (ENSNVIG00000019721) #27	R3HCC1L (ENSNVIG00000019732) #28	CRTAC1 (ENSNVIG00000019780) #29	GOLGA7B (ENSNVIG00000019876) #30	SFRP5 (ENSNVIG00000019893) #31	ZFYVE27 (ENSNVIG00000019905) #32	MARVELD1 (ENSNVIG00000019972) #33	AVPI1 (ENSNVIG00000019986) #34	PI4K2A (ENSNVIG00000020017) #35	MORN4 (ENSNVIG00000020040) #36
Ferret	MODERN SPECIES	187	ENSMPUG00000016974	BLOC1S2 (ENSMPUG00000016975) #10	CWF19L1 (ENSMPUG00000016977) #11	CHUK (ENSMPUG00000016978) #12	ERLIN1 (ENSMPUG00000016979) #13	CPN1 (ENSMPUG00000016982) #14	DNMBP (ENSMPUG00000016984) #15	ABCC2 (ENSMPUG00000016985) #16	CUTC (ENSMPUG00000016986) #18	COX15 (ENSMPUG00000016987) #17	ENTPD7 (ENSMPUG00000016988) #19	SLC25A28 (ENSMPUG00000016989) #20	ENSMPUG00000016991	NKX2-3 (ENSMPUG00000016992) #21	ENSMPUG00000016995	GOT1 (ENSMPUG00000016996) #22	CNNM1 (ENSMPUG00000016997) #23	ENSMPUG00000016998 #24	HPSE2 (ENSMPUG00000016999) #24	HPS1 (ENSMPUG00000017000) #25	PYROXD2 (ENSMPUG00000017020) #26	LOXL4 (ENSMPUG00000017023) #27	R3HCC1L (ENSMPUG00000017025) #28	CRTAC1 (ENSMPUG00000017026) #29	GOLGA7B (ENSMPUG00000017027) #30	ENSMPUG00000017031	ZFYVE27 (ENSMPUG00000017032) #32	SFRP5 (ENSMPUG00000017033) #31	AVPI1 (ENSMPUG00000017034) #34	PI4K2A (ENSMPUG00000017036) #35	MORN4 (ENSMPUG00000017037) #36
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872.b #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00940000162741.j.l.b.b	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049.i #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872.b #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Dog	MODERN SPECIES	20	PKD2L1 (ENSCAFG00845016477) #9	BLOC1S2 (ENSCAFG00845016389) #10	CWF19L1 (ENSCAFG00845016322) #11	CHUK (ENSCAFG00845016257) #12	ERLIN1 (ENSCAFG00845016181) #13	CPN1 (ENSCAFG00845016127) #14	ENSCAFG00845016095	DNMBP (ENSCAFG00845030948) #15	ABCC2 (ENSCAFG00845030901) #16	ENSCAFG00845030866	CUTC (ENSCAFG00845030834) #18	COX15 (ENSCAFG00845030808) #17	ENTPD7 (ENSCAFG00845030797) #19	SLC25A28 (ENSCAFG00845030792) #20	NKX2-3 (ENSCAFG00845030787) #21	GOT1 (ENSCAFG00845030772) #22	CNNM1 (ENSCAFG00845030755) #23	HPSE2 (ENSCAFG00845030674) #24	HPS1 (ENSCAFG00845030620) #25	ENSCAFG00845030609	PYROXD2 (ENSCAFG00845030554) #26	LOXL4 (ENSCAFG00845030491) #27	R3HCC1L (ENSCAFG00845030456) #28	GOLGA7B (ENSCAFG00845030415) #30	CRTAC1 (ENSCAFG00845030290) #29	SFRP5 (ENSCAFG00845030226) #31	ZFYVE27 (ENSCAFG00845030149) #32	MARVELD1 (ENSCAFG00845030060) #33	ENSCAFG00845030048 #34	PI4K2A (ENSCAFG00845029994) #35	MORN4 (ENSCAFG00845029947) #36
Dingo	MODERN SPECIES	165	PKD2L1 (ENSCAFG00020008288) #9	BLOC1S2 (ENSCAFG00020008279) #10	CWF19L1 (ENSCAFG00020008275) #11	CHUK (ENSCAFG00020007624) #12	ERLIN1 (ENSCAFG00020007585) #13	CPN1 (ENSCAFG00020007578) #14	ENSCAFG00020007576	DNMBP (ENSCAFG00020007574) #15	ABCC2 (ENSCAFG00020007504) #16	ENSCAFG00020007494	CUTC (ENSCAFG00020007478) #18	COX15 (ENSCAFG00020007471) #17	ENTPD7 (ENSCAFG00020007458) #19	SLC25A28 (ENSCAFG00020007452) #20	NKX2-3 (ENSCAFG00020007443) #21	GOT1 (ENSCAFG00020007440) #22	CNNM1 (ENSCAFG00020007396) #23	ENSCAFG00020007369 #24	HPSE2 (ENSCAFG00020007338) #24	HPS1 (ENSCAFG00020006365) #25	PYROXD2 (ENSCAFG00020006321) #26	LOXL4 (ENSCAFG00020006249) #27	R3HCC1L (ENSCAFG00020006245) #28	CRTAC1 (ENSCAFG00020006114) #29	GOLGA7B (ENSCAFG00020006112) #30	SFRP5 (ENSCAFG00020006107) #31	ZFYVE27 (ENSCAFG00020006105) #32	MARVELD1 (ENSCAFG00020006102) #33	ENSCAFG00020006100 #34	PI4K2A (ENSCAFG00020006060) #35	MORN4 (ENSCAFG00020006048) #36
Red fox	MODERN SPECIES		BLOC1S2 (ENSVVUG00000024915) #10	CWF19L1 (ENSVVUG00000024848) #11	CHUK (ENSVVUG00000024844) #12	ERLIN1 (ENSVVUG00000024839) #13	ENSVVUG00000024837	CPN1 (ENSVVUG00000024833) #14	ENSVVUG00000024832	DNMBP (ENSVVUG00000024611) #15	ABCC2 (ENSVVUG00000023522) #16	ENSVVUG00000023442	CUTC (ENSVVUG00000023417) #18	COX15 (ENSVVUG00000023414) #17	ENTPD7 (ENSVVUG00000023409) #19	SLC25A28 (ENSVVUG00000023405) #20	NKX2-3 (ENSVVUG00000023404) #21	GOT1 (ENSVVUG00000023396) #22	CNNM1 (ENSVVUG00000023380) #23	ENSVVUG00000023377 #24	HPSE2 (ENSVVUG00000023366) #24	HPS1 (ENSVVUG00000023341) #25	PYROXD2 (ENSVVUG00000023335) #26	LOXL4 (ENSVVUG00000023322) #27	R3HCC1L (ENSVVUG00000023317) #28	CRTAC1 (ENSVVUG00000023277) #29	SFRP5 (ENSVVUG00000023267) #31	ZFYVE27 (ENSVVUG00000023261) #32	MARVELD1 (ENSVVUG00000023256) #33	AVPI1 (ENSVVUG00000023255) #34	PI4K2A (ENSVVUG00000023252) #35	MORN4 (ENSVVUG00000023247) #36	C10orf62 (ENSVVUG00000023240) #37
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Tiger	MODERN SPECIES	136	SEC31B (ENSPTIG00000012634)	SCD (ENSPTIG00000012317) #8	PKD2L1 (ENSPTIG00000011355) #9	BLOC1S2 (ENSPTIG00000010062) #10	CWF19L1 (ENSPTIG00000009695) #11	CHUK (ENSPTIG00000007746) #12	ERLIN1 (ENSPTIG00000006952) #13	CPN1 (ENSPTIG00000006187) #14	DNMBP (ENSPTIG00000000911) #15	ABCC2 (ENSPTIG00000021926) #16	CUTC (ENSPTIG00000021839) #18	COX15 (ENSPTIG00000021530) #17	ENTPD7 (ENSPTIG00000021486) #19	SLC25A28 (ENSPTIG00000020921) #20	NKX2-3 (ENSPTIG00000020694) #21	GOT1 (ENSPTIG00000020444) #22	CNNM1 (ENSPTIG00000018523) #23	HPSE2 (ENSPTIG00000013671) #24	HPS1 (ENSPTIG00000008067) #25	PYROXD2 (ENSPTIG00000007293) #26	LOXL4 (ENSPTIG00000006871) #27	ENSPTIG00000005720 #28	CRTAC1 (ENSPTIG00000021313) #29	GOLGA7B (ENSPTIG00000020956) #30	ZFYVE27 (ENSPTIG00000018038) #32	AVPI1 (ENSPTIG00000017197) #34	PI4K2A (ENSPTIG00000016813) #35	MORN4 (ENSPTIG00000015742) #36	C10orf62 (ENSPTIG00000015070) #37	HOGA1 (ENSPTIG00000014480)	ANKRD2 (ENSPTIG00000012729)
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000160584 #7	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
lion	MODERN SPECIES	11	WNT8B (ENSPLOG00000006038) #7	SCD (ENSPLOG00000006063) #8	PKD2L1 (ENSPLOG00000006098) #9	BLOC1S2 (ENSPLOG00000006186) #10	CWF19L1 (ENSPLOG00000006219) #11	CHUK (ENSPLOG00000006290) #12	ERLIN1 (ENSPLOG00000006354) #13	CPN1 (ENSPLOG00000006378) #14	DNMBP (ENSPLOG00000006463) #15	ABCC2 (ENSPLOG00000006642) #16	CUTC (ENSPLOG00000006732) #18	COX15 (ENSPLOG00000006773) #17	ENTPD7 (ENSPLOG00000006821) #19	SLC25A28 (ENSPLOG00000006856) #20	NKX2-3 (ENSPLOG00000006875) #21	GOT1 (ENSPLOG00000006894) #22	CNNM1 (ENSPLOG00000006934) #23	HPSE2 (ENSPLOG00000007079) #24	HPS1 (ENSPLOG00000007321) #25	PYROXD2 (ENSPLOG00000007348) #26	LOXL4 (ENSPLOG00000007390) #27	R3HCC1L (ENSPLOG00000007438) #28	CRTAC1 (ENSPLOG00000007504) #29	GOLGA7B (ENSPLOG00000007655) #30	SFRP5 (ENSPLOG00000007685) #31	ZFYVE27 (ENSPLOG00000007744) #32	MARVELD1 (ENSPLOG00000007915) #33	AVPI1 (ENSPLOG00000007926) #34	PI4K2A (ENSPLOG00000007948) #35	MORN4 (ENSPLOG00000007986) #36	HOGA1 (ENSPLOG00000008038)
leopard	MODERN SPECIES	33	WNT8B (ENSPPRG00000001818) #7	SCD (ENSPPRG00000001976) #8	PKD2L1 (ENSPPRG00000003539) #9	BLOC1S2 (ENSPPRG00000005194) #10	CWF19L1 (ENSPPRG00000005516) #11	CHUK (ENSPPRG00000005992) #12	ERLIN1 (ENSPPRG00000006192) #13	CPN1 (ENSPPRG00000008460) #14	DNMBP (ENSPPRG00000009541) #15	ABCC2 (ENSPPRG00000010266) #16	CUTC (ENSPPRG00000016037) #18	COX15 (ENSPPRG00000018767) #17	ENTPD7 (ENSPPRG00000024664) #19	SLC25A28 (ENSPPRG00000024601) #20	NKX2-3 (ENSPPRG00000024447) #21	GOT1 (ENSPPRG00000024393) #22	CNNM1 (ENSPPRG00000024142) #23	HPSE2 (ENSPPRG00000000250) #24	HPS1 (ENSPPRG00000000907) #25	PYROXD2 (ENSPPRG00000001210) #26	LOXL4 (ENSPPRG00000001920) #27	ENSPPRG00000002263 #28	CRTAC1 (ENSPPRG00000003319) #29	GOLGA7B (ENSPPRG00000003605) #30	SFRP5 (ENSPPRG00000004042) #31	ZFYVE27 (ENSPPRG00000006534) #32	MARVELD1 (ENSPPRG00000021353) #33	AVPI1 (ENSPPRG00000007713) #34	PI4K2A (ENSPPRG00000007831) #35	MORN4 (ENSPPRG00000008387) #36	HOGA1 (ENSPPRG00000008700)
Cat	MODERN SPECIES	242	NDUFB8 (ENSFCAG00000041098)	SEC31B (ENSFCAG00000006452)	WNT8B (ENSFCAG00000006451) #7	SCD (ENSFCAG00000031590) #8	PKD2L1 (ENSFCAG00000006445) #9	BLOC1S2 (ENSFCAG00000032495) #10	CWF19L1 (ENSFCAG00000010585) #11	CHUK (ENSFCAG00000004930) #12	ERLIN1 (ENSFCAG00000029825) #14	DNMBP (ENSFCAG00000014383) #15	ABCC2 (ENSFCAG00000014380) #16	COX15 (ENSFCAG00000014378) #17	ENTPD7 (ENSFCAG00000014376) #19	SLC25A28 (ENSFCAG00000045981) #20	NKX2-3 (ENSFCAG00000042789) #21	GOT1 (ENSFCAG00000028066) #22	CNNM1 (ENSFCAG00000014375) #23	HPSE2 (ENSFCAG00000046015) #24	HPS1 (ENSFCAG00000009348) #25	PYROXD2 (ENSFCAG00000009346) #26	LOXL4 (ENSFCAG00000009345) #27	R3HCC1L (ENSFCAG00000030301) #28	CRTAC1 (ENSFCAG00000013435) #29	SFRP5 (ENSFCAG00000038195) #31	ZFYVE27 (ENSFCAG00000013433) #32	MARVELD1 (ENSFCAG00000041291) #33	AVPI1 (ENSFCAG00000027156) #34	PI4K2A (ENSFCAG00000013431) #35	MORN4 (ENSFCAG00000028227) #36	HOGA1 (ENSFCAG00000024587)	ANKRD2 (ENSFCAG00000013428)
Eulipotyphla	ANCESTRAL SPECIES	1310																ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23
Hedgehog	MODERN SPECIES	2081																GOT1 (ENSEEUG00000011356) #22	ENSEEUG00000011285 #23
Common shrew	MODERN SPECIES	1488																GOT1 (ENSSARG00000012890) #22
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37	ENSGT00530000063604.A
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00940000154908 #8	ENSGT00940000157274 #9	ENSGT00390000005889 #10	ENSGT00940000156000 #11	ENSGT00950000182937.A.a #12	ENSGT00390000014666.b #13	ENSGT00940000163402	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00390000015820 #37	ENSGT00530000063604.A
Elephant	MODERN SPECIES	3	SCD (ENSLAFG00000017790) #8	PKD2L1 (ENSLAFG00000014984) #9	BLOC1S2 (ENSLAFG00000014979) #10	CWF19L1 (ENSLAFG00000014975) #11	CHUK (ENSLAFG00000014964) #12	ERLIN1 (ENSLAFG00000020642) #13	ENSLAFG00000021818	CPN1 (ENSLAFG00000009332) #14	DNMBP (ENSLAFG00000030951) #15	ABCC2 (ENSLAFG00000014342) #16	CUTC (ENSLAFG00000005938) #18	COX15 (ENSLAFG00000005937) #17	ENTPD7 (ENSLAFG00000005933) #19	SLC25A28 (ENSLAFG00000005821) #20	NKX2-3 (ENSLAFG00000014664) #21	GOT1 (ENSLAFG00000000163) #22	CNNM1 (ENSLAFG00000000165) #23	HPSE2 (ENSLAFG00000015101) #24	HPS1 (ENSLAFG00000000437) #25	PYROXD2 (ENSLAFG00000000434) #26	LOXL4 (ENSLAFG00000001421) #27	R3HCC1L (ENSLAFG00000001419) #28	CRTAC1 (ENSLAFG00000003369) #29	GOLGA7B (ENSLAFG00000003367) #30	SFRP5 (ENSLAFG00000013658) #31	ZFYVE27 (ENSLAFG00000013655) #32	AVPI1 (ENSLAFG00000022434) #34	PI4K2A (ENSLAFG00000010665) #35	MORN4 (ENSLAFG00000022767) #36	HOGA1 (ENSLAFG00000010660)	ANKRD2 (ENSLAFG00000010658)
Hyrax	MODERN SPECIES	1608																GOT1 (ENSPCAG00000004280) #22
Tenrec	DUPLICATION
Tenrec	MODERN SPECIES	1985																ENSETEG00000012333 #22	ENSETEG00000012330 #23
Tenrec	MODERN SPECIES	12898																ENSETEG00000003903 #22
Xenarthra	ANCESTRAL SPECIES	825											ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22
Armadillo	MODERN SPECIES	2387										ENSDNOG00000033119	CUTC (ENSDNOG00000015690) #18	COX15 (ENSDNOG00000000855) #17	ENTPD7 (ENSDNOG00000000852) #19	SLC25A28 (ENSDNOG00000045994) #20	NKX2-3 (ENSDNOG00000040342) #21	GOT1 (ENSDNOG00000033715) #22
Sloth	MODERN SPECIES	1798																GOT1 (ENSCHOG00000002242) #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00570000079168.b.a	ENSGT00940000160819	ENSGT00390000003133	ENSGT00390000000854.c.b	ENSGT00390000000786	ENSGT00940000170293	ENSGT00940000163402.b.b	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT01000000220768	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00570000079168.b.a	ENSGT00940000160819	ENSGT00390000003133	ENSGT00390000000854.c.b	ENSGT00390000000786	ENSGT00940000170293	ENSGT00940000163402.b.b	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT01020000233779	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT01000000220768	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT01030000234528.A.a.b	ENSGT00570000079168.b.a	ENSGT00940000160819	ENSGT00390000003133	ENSGT00390000000854.c.b	ENSGT00390000000786	ENSGT00940000170293	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT01020000233779	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT01000000220768	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT01030000234528.A.a.b	ENSGT00570000079168.b.a	ENSGT00940000160819	ENSGT00390000003133	ENSGT00390000000854.c.b	ENSGT00390000000786	ENSGT00940000170293	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000161741 #16	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT01020000233779	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT01000000220768	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35
Common wonbat	MODERN SPECIES	39	ENSVURG00010016262	ENSVURG00010016268	SHLD2 (ENSVURG00010016292)	ENSVURG00010016326	ENSVURG00010016343	ADIRF (ENSVURG00010016356)	ENSVURG00010016364	CPN1 (ENSVURG00010016373) #14	DNMBP (ENSVURG00010016403) #15	ENSVURG00010016480 #16	CUTC (ENSVURG00010016519) #18	COX15 (ENSVURG00010016544) #17	ENTPD7 (ENSVURG00010016570) #19	SLC25A28 (ENSVURG00010016582) #20	NKX2-3 (ENSVURG00010016593) #21	GOT1 (ENSVURG00010016606) #22	CNNM1 (ENSVURG00010016618) #23	ENSVURG00010016643 #24	ENSVURG00010016657 #24	HPS1 (ENSVURG00010016677) #25	PYROXD2 (ENSVURG00010016717) #26	ENSVURG00010016743	LOXL4 (ENSVURG00010016749) #27	ENSVURG00010016755 #28	CRTAC1 (ENSVURG00010016779) #29	GOLGA7B (ENSVURG00010016801) #30	SFRP5 (ENSVURG00010016815) #31	ZFYVE27 (ENSVURG00010016841) #32	MARVELD1 (ENSVURG00010016976) #33	AVPI1 (ENSVURG00010016980) #34	PI4K2A (ENSVURG00010016985) #35
koala	MODERN SPECIES	65	ENSPCIG00000007961	ENSPCIG00000007964	ENSPCIG00000028408	SHLD2 (ENSPCIG00000028413)	ENSPCIG00000007968	ENSPCIG00000007973	ENSPCIG00000037354	ENSPCIG00000007979 #14	DNMBP (ENSPCIG00000014360) #15	ENSPCIG00000033203 #16	CUTC (ENSPCIG00000028280) #18	COX15 (ENSPCIG00000028278) #17	ENTPD7 (ENSPCIG00000028276) #19	SLC25A28 (ENSPCIG00000028275) #20	NKX2-3 (ENSPCIG00000032194) #21	GOT1 (ENSPCIG00000028267) #22	CNNM1 (ENSPCIG00000028265) #23	ENSPCIG00000028264 #24	ENSPCIG00000035242 #24	HPS1 (ENSPCIG00000021283) #25	PYROXD2 (ENSPCIG00000021262) #26	ENSPCIG00000021258	LOXL4 (ENSPCIG00000021256) #27	ENSPCIG00000035873 #28	ENSPCIG00000021252	CRTAC1 (ENSPCIG00000021225) #29	GOLGA7B (ENSPCIG00000036348) #30	SFRP5 (ENSPCIG00000034993) #31	ZFYVE27 (ENSPCIG00000002380) #32	MARVELD1 (ENSPCIG00000002363) #33	AVPI1 (ENSPCIG00000033102) #34
Wallaby	MODERN SPECIES	14130																ENSMEUG00000002994 #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000030087	ENSSHAG00000008523	ENSSHAG00000008667	ENSSHAG00000009424	ENSSHAG00000022709	ENSSHAG00000030063	ENSSHAG00000000782	ENSSHAG00000010622 #14	DNMBP (ENSSHAG00000011335) #15	ENSSHAG00000011765 #16	CUTC (ENSSHAG00000021965) #18	COX15 (ENSSHAG00000012385) #17	ENTPD7 (ENSSHAG00000012533) #19	SLC25A28 (ENSSHAG00000012792) #20	NKX2-3 (ENSSHAG00000013355) #21	GOT1 (ENSSHAG00000013995) #22	CNNM1 (ENSSHAG00000014170) #23	ENSSHAG00000014646 #24	ENSSHAG00000022698 #24	HPS1 (ENSSHAG00000016600) #25	PYROXD2 (ENSSHAG00000016671) #26	ENSSHAG00000023437	LOXL4 (ENSSHAG00000017119) #27	ENSSHAG00000026322 #28	CRTAC1 (ENSSHAG00000017544) #29	GOLGA7B (ENSSHAG00000028342) #30	SFRP5 (ENSSHAG00000017924) #31	ZFYVE27 (ENSSHAG00000017946) #32	MARVELD1 (ENSSHAG00000030010) #33	AVPI1 (ENSSHAG00000021027) #34	PI4K2A (ENSSHAG00000018035) #35
Opossum	MODERN SPECIES		ENSMODG00000002691	ENSMODG00000002697	ENSMODG00000002716	SHLD2 (ENSMODG00000002724)	ENSMODG00000002756	ENSMODG00000002759	ENSMODG00000002772	CPN1 (ENSMODG00000003251) #14	DNMBP (ENSMODG00000003273) #15	ENSMODG00000003389 #16	CUTC (ENSMODG00000048417) #18	COX15 (ENSMODG00000003487) #17	ENTPD7 (ENSMODG00000003505) #19	SLC25A28 (ENSMODG00000003519) #20	NKX2-3 (ENSMODG00000043640) #21	GOT1 (ENSMODG00000003558) #22	CNNM1 (ENSMODG00000003576) #23	ENSMODG00000028699 #24	ENSMODG00000003602 #24	HPS1 (ENSMODG00000003664) #25	ENSMODG00000003692 #26	LOXL4 (ENSMODG00000003726) #27	ENSMODG00000039006 #28	ENSMODG00000003748 #28	ENSMODG00000050795	CRTAC1 (ENSMODG00000003807) #29	GOLGA7B (ENSMODG00000028192) #30	SFRP5 (ENSMODG00000003859) #31	ZFYVE27 (ENSMODG00000003907) #32	MARVELD1 (ENSMODG00000003911) #33	ENSMODG00000003917 #34
Platypus	MODERN SPECIES	14	DNTT (ENSOANG00000005141)	HELLS (ENSOANG00000005139)	PDLIM1 (ENSOANG00000005138)	SORBS1 (ENSOANG00000005136)	ALDH18A1 (ENSOANG00000007159)	TCTN3 (ENSOANG00000019944)	ENTPD1 (ENSOANG00000037893)	CPN1 (ENSOANG00000043726) #14	DNMBP (ENSOANG00000044119) #15	ENSOANG00000005819 #16	CUTC (ENSOANG00000011762) #18	COX15 (ENSOANG00000010125) #17	ENTPD7 (ENSOANG00000041336) #19	SLC25A28 (ENSOANG00000006335) #20	NKX2-3 (ENSOANG00000042302) #21	GOT1 (ENSOANG00000006868) #22	CNNM1 (ENSOANG00000044842) #23	ENSOANG00000047769 #24	ENSOANG00000039488 #24	HPS1 (ENSOANG00000003472) #25	PYROXD2 (ENSOANG00000003471) #26	ENSOANG00000019825	LOXL4 (ENSOANG00000000515) #27	ENSOANG00000037303 #28	ENSOANG00000045727	CRTAC1 (ENSOANG00000010461) #29	GOLGA7B (ENSOANG00000047632) #30	SFRP5 (ENSOANG00000043234) #31	ZFYVE27 (ENSOANG00000006007) #32	MARVELD1 (ENSOANG00000009255) #33	AVPI1 (ENSOANG00000040881) #34
Sauria	ANCESTRAL SPECIES	8			ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Archelosauria	ANCESTRAL SPECIES	10			ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Archosauria	ANCESTRAL SPECIES	7	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Aves	ANCESTRAL SPECIES	6	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Neognathae	ANCESTRAL SPECIES	7	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00940000165097.b	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000177979	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Golden eagle	MODERN SPECIES	2	ENSACCG00020002760	ENSACCG00020002690	ADGRA1 (ENSACCG00020002556)	ENSACCG00020002536	ENTPD1 (ENSACCG00020002506)	CPN1 (ENSACCG00020002478) #14	DNMBP (ENSACCG00020002424) #15	ENSACCG00020002084	CUTC (ENSACCG00020001448) #18	COX15 (ENSACCG00020001426) #17	ATP6V0E2 (ENSACCG00020001403)	ENTPD7 (ENSACCG00020001384) #19	SLC25A28 (ENSACCG00020001364) #20	NKX2-3 (ENSACCG00020001343) #21	ENSACCG00020001328	GOT1 (ENSACCG00020001316) #22	CNNM1 (ENSACCG00020001275) #23	HPSE2 (ENSACCG00020001239) #24	HPS1 (ENSACCG00020001192) #25	PYROXD2 (ENSACCG00020001152) #26	LOXL4 (ENSACCG00020001067) #27	R3HCC1L (ENSACCG00020000919) #28	CRTAC1 (ENSACCG00020000882) #29	GOLGA7B (ENSACCG00020000849) #30	SFRP5 (ENSACCG00020000820) #31	ZFYVE27 (ENSACCG00020000789) #32	AVPI1 (ENSACCG00020000729) #34	PI4K2A (ENSACCG00020000698) #35	MORN4 (ENSACCG00020000670) #36	HOGA1 (ENSACCG00020000638)	ANKRD2 (ENSACCG00020000618)
Kakapo	MODERN SPECIES	22	ENSSHBG00005020686	ENSSHBG00005020690	ENSSHBG00005020698	ADGRA1 (ENSSHBG00005020702)	ENSSHBG00005020708	ENTPD1 (ENSSHBG00005020713)	CPN1 (ENSSHBG00005020718) #14	DNMBP (ENSSHBG00005020724) #15	ENSSHBG00005020733	CUTC (ENSSHBG00005020740) #18	COX15 (ENSSHBG00005020758) #17	ATP6V0E2 (ENSSHBG00005020762)	ENTPD7 (ENSSHBG00005020766) #19	SLC25A28 (ENSSHBG00005020773) #20	NKX2-3 (ENSSHBG00005020777) #21	GOT1 (ENSSHBG00005020787) #22	CNNM1 (ENSSHBG00005020808) #23	HPSE2 (ENSSHBG00005020827) #24	HPS1 (ENSSHBG00005020839) #25	PYROXD2 (ENSSHBG00005020847) #26	LOXL4 (ENSSHBG00005020859) #27	R3HCC1L (ENSSHBG00005020866) #28	CRTAC1 (ENSSHBG00005020869) #29	GOLGA7B (ENSSHBG00005020876) #30	SFRP5 (ENSSHBG00005020880) #31	ZFYVE27 (ENSSHBG00005020886) #32	MARVELD1 (ENSSHBG00005020893) #33	AVPI1 (ENSSHBG00005020896) #34	PI4K2A (ENSSHBG00005020904) #35	HOGA1 (ENSSHBG00005020914)	ANKRD2 (ENSSHBG00005020924)
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000165097.b	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000177979	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00960000193282	ENSGT00510000049872 #34	ENSGT00390000010434.b #35
Great tit	MODERN SPECIES	26	PPIF (ENSPMJG00000003782)	ZMIZ1 (ENSPMJG00000003792)	ENSPMJG00000003823	POLR3A (ENSPMJG00000003830)	DLG5 (ENSPMJG00000003837)	ENSPMJG00000003870	ENTPD1 (ENSPMJG00000003877)	CPN1 (ENSPMJG00000003883) #14	DNMBP (ENSPMJG00000003884) #15	ENSPMJG00000003890	CUTC (ENSPMJG00000003894) #18	COX15 (ENSPMJG00000003900) #17	SLC25A28 (ENSPMJG00000003901) #20	ENTPD7 (ENSPMJG00000003905) #19	NKX2-3 (ENSPMJG00000003959) #21	GOT1 (ENSPMJG00000003964) #22	ENSPMJG00000003969	CNNM1 (ENSPMJG00000003971) #23	HPSE2 (ENSPMJG00000003974) #24	HPS1 (ENSPMJG00000003977) #25	PYROXD2 (ENSPMJG00000003978) #26	LOXL4 (ENSPMJG00000003995) #27	R3HCC1L (ENSPMJG00000003997) #28	CRTAC1 (ENSPMJG00000004009) #29	GOLGA7B (ENSPMJG00000004029) #30	SFRP5 (ENSPMJG00000004031) #31	ZFYVE27 (ENSPMJG00000004057) #32	MARVELD1 (ENSPMJG00000004062) #33	ENSPMJG00000004065	PI4K2A (ENSPMJG00000004066) #35	MORN4 (ENSPMJG00000004071) #36
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000165097.b	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000177979	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000165097.b	ENSGT00960000190513	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000177979	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Medium ground finch	MODERN SPECIES	3	CCNJ (ENSGFOG00000000124)	ZNF518A (ENSGFOG00000000121)	DNTT (ENSGFOG00000000117)	KNDC1 (ENSGFOG00000000102)	ADGRA1 (ENSGFOG00000000091)	ENSGFOG00000000084	ENTPD1 (ENSGFOG00000000077)	CPN1 (ENSGFOG00000000074) #14	DNMBP (ENSGFOG00000000068) #15	ENSGFOG00000000030	CUTC (ENSGFOG00000000007) #18	COX15 (ENSGFOG00000008262) #17	ENTPD7 (ENSGFOG00000008227) #19	SLC25A28 (ENSGFOG00000008217) #20	ENSGFOG00000008213	GOT1 (ENSGFOG00000008200) #22	ENSGFOG00000008192 #23	HPS1 (ENSGFOG00000008180) #25	PYROXD2 (ENSGFOG00000008141) #26	LOXL4 (ENSGFOG00000008104) #27	R3HCC1L (ENSGFOG00000008093) #28	CRTAC1 (ENSGFOG00000008070) #29	GOLGA7B (ENSGFOG00000008054) #30	SFRP5 (ENSGFOG00000008046) #31	ZFYVE27 (ENSGFOG00000008036) #32	PI4K2A (ENSGFOG00000007984) #35	MORN4 (ENSGFOG00000007960) #36	HOGA1 (ENSGFOG00000007950)	ANKRD2 (ENSGFOG00000007941)	UBTD1 (ENSGFOG00000007936)	MMS19 (ENSGFOG00000007914)
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000165097.b	ENSGT00960000190513	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000177979	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Zebra finch	MODERN SPECIES	28	ENSTGUG00000009093	ENSTGUG00000028139	KNDC1 (ENSTGUG00000009094)	ADGRA1 (ENSTGUG00000009101)	ENSTGUG00000009131	ENTPD1 (ENSTGUG00000009148)	CPN1 (ENSTGUG00000009169) #14	DNMBP (ENSTGUG00000009180) #15	ENSTGUG00000009186	CUTC (ENSTGUG00000009354) #18	COX15 (ENSTGUG00000009368) #17	ATP6V0E2 (ENSTGUG00000009386)	ENTPD7 (ENSTGUG00000009398) #19	SLC25A28 (ENSTGUG00000009410) #20	NKX2-3 (ENSTGUG00000009415) #21	GOT1 (ENSTGUG00000009418) #22	ENSTGUG00000027229	CNNM1 (ENSTGUG00000009430) #23	HPSE2 (ENSTGUG00000009462) #24	PYROXD2 (ENSTGUG00000009444) #26	LOXL4 (ENSTGUG00000009546) #27	R3HCC1L (ENSTGUG00000009574) #28	CRTAC1 (ENSTGUG00000009582) #29	GOLGA7B (ENSTGUG00000026467) #30	SFRP5 (ENSTGUG00000023601) #31	ZFYVE27 (ENSTGUG00000009586) #32	AVPI1 (ENSTGUG00000025747) #34	PI4K2A (ENSTGUG00000009606) #35	MORN4 (ENSTGUG00000009616) #36	HOGA1 (ENSTGUG00000009624)	ANKRD2 (ENSTGUG00000022547)
Common canary	MODERN SPECIES	7	ENSSCAG00000016801	ENSSCAG00000016797	KNDC1 (ENSSCAG00000016790)	ADGRA1 (ENSSCAG00000016784)	ENSSCAG00000016775	ENTPD1 (ENSSCAG00000016768)	CPN1 (ENSSCAG00000016764) #14	DNMBP (ENSSCAG00000016756) #15	ENSSCAG00000016744	CUTC (ENSSCAG00000016738) #18	COX15 (ENSSCAG00000016735) #17	ATP6V0E2 (ENSSCAG00000016732)	ENTPD7 (ENSSCAG00000016728) #19	SLC25A28 (ENSSCAG00000016727) #20	ENSSCAG00000016725	GOT1 (ENSSCAG00000016723) #22	CNNM1 (ENSSCAG00000016720) #23	ENSSCAG00000016717	HPSE2 (ENSSCAG00000016715) #24	HPS1 (ENSSCAG00000016709) #25	PYROXD2 (ENSSCAG00000016694) #26	LOXL4 (ENSSCAG00000016687) #27	ENSSCAG00000016682 #28	CRTAC1 (ENSSCAG00000016674) #29	GOLGA7B (ENSSCAG00000016669) #30	SFRP5 (ENSSCAG00000016665) #31	ZFYVE27 (ENSSCAG00000016659) #32	MORN4 (ENSSCAG00000016656) #36	HOGA1 (ENSSCAG00000016653)	ANKRD2 (ENSSCAG00000016650)	UBTD1 (ENSSCAG00000016648)
Flycatcher	MODERN SPECIES	25	ENSFALG00000007963	CCNJ (ENSFALG00000028478)	ZNF518A (ENSFALG00000007969)	ENSFALG00000007971	DNTT (ENSFALG00000007979)	ENSFALG00000015104	ENSFALG00000025354	ENSFALG00000008006	ADGRA1 (ENSFALG00000008023)	ENSFALG00000008026	ENSFALG00000008031	ENSFALG00000008040 #14	DNMBP (ENSFALG00000008054) #15	ENSFALG00000008090	ENSFALG00000008185 #18	ENSFALG00000008257 #22	ENSFALG00000026409 #17	ENSFALG00000023969	ENTPD7 (ENSFALG00000008221) #19	ENSFALG00000008240 #20	ENSFALG00000025597	CNNM1 (ENSFALG00000008277) #23	HPSE2 (ENSFALG00000008281) #24	HPS1 (ENSFALG00000008293) #25	PYROXD2 (ENSFALG00000008323) #26	LOXL4 (ENSFALG00000008346) #27	R3HCC1L (ENSFALG00000008355) #28	CRTAC1 (ENSFALG00000008358) #29	GOLGA7B (ENSFALG00000008361) #30	SFRP5 (ENSFALG00000008364) #31	ZFYVE27 (ENSFALG00000008374) #32
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000165097.b	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000177979	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000164861	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Japanese quail	MODERN SPECIES	24	ENSCJPG00005019512	VENTX (ENSCJPG00005019513)	ENSCJPG00005019514	ADGRA1 (ENSCJPG00005019517)	ENSCJPG00005019518	ENTPD1 (ENSCJPG00005019520)	CPN1 (ENSCJPG00005019521) #14	DNMBP (ENSCJPG00005019522) #15	ENSCJPG00005019523	COX15 (ENSCJPG00005019524) #17	CUTC (ENSCJPG00005019525) #18	ATP6V0E2 (ENSCJPG00005019526)	ENTPD7 (ENSCJPG00005019527) #19	SLC25A28 (ENSCJPG00005019528) #20	NKX2-3 (ENSCJPG00005019530) #21	GOT1 (ENSCJPG00005019532) #22	ENSCJPG00005019533	CNNM1 (ENSCJPG00005019534) #23	HPSE2 (ENSCJPG00005019535) #24	HPS1 (ENSCJPG00005019536) #25	ENSCJPG00005019537	LOXL4 (ENSCJPG00005019538) #27	ENSCJPG00005019540 #28	CRTAC1 (ENSCJPG00005019542) #29	GOLGA7B (ENSCJPG00005019543) #30	SFRP5 (ENSCJPG00005019544) #31	ZFYVE27 (ENSCJPG00005019545) #32	MARVELD1 (ENSCJPG00005019546) #33	ENSCJPG00005019547	PI4K2A (ENSCJPG00005019548) #35	MORN4 (ENSCJPG00005019551) #36
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00940000165097.a	ENSGT00940000165097.b	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000177979	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000164861	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Chicken	MODERN SPECIES	35	VENTX (ENSGALG00010021787)	VENTX (ENSGALG00010021796)	ENSGALG00010021842	ADGRA1 (ENSGALG00010021966)	ENSGALG00010021994	ENTPD1 (ENSGALG00010022100)	CPN1 (ENSGALG00010022154) #14	DNMBP (ENSGALG00010022200) #15	ENSGALG00010022211	CUTC (ENSGALG00010022221) #18	COX15 (ENSGALG00010022234) #17	ENTPD7 (ENSGALG00010022244) #19	SLC25A28 (ENSGALG00010022250) #20	NKX2-3 (ENSGALG00010018311) #21	ENSGALG00010018318	GOT1 (ENSGALG00010018323) #22	ENSGALG00010018328	CNNM1 (ENSGALG00010018350) #23	HPSE2 (ENSGALG00010018365) #24	HPS1 (ENSGALG00010018374) #25	PYROXD2 (ENSGALG00010018430) #27	R3HCC1L (ENSGALG00010017790) #28	CRTAC1 (ENSGALG00010023163) #29	GOLGA7B (ENSGALG00010017891) #30	SFRP5 (ENSGALG00010017808) #31	ZFYVE27 (ENSGALG00010020595) #32	MARVELD1 (ENSGALG00010022840) #33	AVPI1 (ENSGALG00010020609) #34	PI4K2A (ENSGALG00010020616) #35	MORN4 (ENSGALG00010020626) #36	HOGA1 (ENSGALG00010020633)
Turkey	MODERN SPECIES	28	ENSMGAG00000015334	ENSMGAG00000022311	ENSMGAG00000020680	ENSMGAG00000009303	ENSMGAG00000021605	ADGRA1 (ENSMGAG00000009318)	ENSMGAG00000009328	ENSMGAG00000009343	ENSMGAG00000009366 #14	DNMBP (ENSMGAG00000009389) #15	ENSMGAG00000009405	ENSMGAG00000009482 #18	COX15 (ENSMGAG00000009501) #17	ENSMGAG00000020994	SLC25A28 (ENSMGAG00000019966) #20	GOT1 (ENSMGAG00000009531) #22	ENSMGAG00000022276	CNNM1 (ENSMGAG00000009551) #23	HPSE2 (ENSMGAG00000009567) #24	HPS1 (ENSMGAG00000009581) #25	ENSMGAG00000009576	LOXL4 (ENSMGAG00000009627) #27	R3HCC1L (ENSMGAG00000009654) #28	CRTAC1 (ENSMGAG00000009664) #29	GOLGA7B (ENSMGAG00000009694) #30	SFRP5 (ENSMGAG00000009698) #31	ZFYVE27 (ENSMGAG00000009699) #32	PI4K2A (ENSMGAG00000009723) #35	MORN4 (ENSMGAG00000009733) #36	HOGA1 (ENSMGAG00000009750)	ANKRD2 (ENSMGAG00000009758)
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000165097.a	ENSGT00940000165097.b	ENSGT00940000163757	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00950000183082.b.b.b #22	ENSGT00940000177979	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00390000010434.b #35	ENSGT00530000063604.A	ENSGT00940000153956.b
Pink-footed goose	MODERN SPECIES	11		KNDC1 (ENSABRG00000005820)	ADGRA1 (ENSABRG00000005791)	ENSABRG00000005753	ENTPD1 (ENSABRG00000005680)	CPN1 (ENSABRG00000005662) #14	DNMBP (ENSABRG00000005624) #15	ENSABRG00000002986	CUTC (ENSABRG00000002672) #18	COX15 (ENSABRG00000002294) #17	ATP6V0E2 (ENSABRG00000002230)	ENTPD7 (ENSABRG00000002225) #19	SLC25A28 (ENSABRG00000002210) #20	NKX2-3 (ENSABRG00000002204) #21	ENSABRG00000002196	GOT1 (ENSABRG00000000737) #22	CNNM1 (ENSABRG00000000684) #23	HPSE2 (ENSABRG00000008559) #24	HPS1 (ENSABRG00000008515) #25	PYROXD2 (ENSABRG00000008449) #26	LOXL4 (ENSABRG00000008428) #27	R3HCC1L (ENSABRG00000008410) #28	CRTAC1 (ENSABRG00000008392) #29	GOLGA7B (ENSABRG00000008376) #30	SFRP5 (ENSABRG00000008364) #31	ZFYVE27 (ENSABRG00000008327) #32	MARVELD1 (ENSABRG00000008311) #33	PI4K2A (ENSABRG00000008151) #35	HOGA1 (ENSABRG00000008109)	ANKRD2 (ENSABRG00000008091)	UBTD1 (ENSABRG00000008082)
Duck	MODERN SPECIES	24	ENSAPLG00000006466	ZNF518A (ENSAPLG00000030969)	BLNK (ENSAPLG00000006563)	DNTT (ENSAPLG00000012429)	ENSAPLG00000018699	ENSAPLG00000024228	ENSAPLG00000017553	KNDC1 (ENSAPLG00000012166)	ENSAPLG00000012029	ENSAPLG00000012001	ENTPD1 (ENSAPLG00000011301)	CPN1 (ENSAPLG00000011182) #14	DNMBP (ENSAPLG00000010732) #15	ENSAPLG00000008620	CUTC (ENSAPLG00000029466) #18	GOT1 (ENSAPLG00000008121) #22	ENSAPLG00000023058	CNNM1 (ENSAPLG00000007945) #23	HPSE2 (ENSAPLG00000027024) #24	ENSAPLG00000019744	CRTAC1 (ENSAPLG00000011099) #29	GOLGA7B (ENSAPLG00000018711) #30	SFRP5 (ENSAPLG00000021384) #31	ZFYVE27 (ENSAPLG00000028815) #32	ENSAPLG00000015404	ZDHHC16 (ENSAPLG00000012896)	SLIT1 (ENSAPLG00000013620)	ARHGAP19 (ENSAPLG00000014166)	RRP12 (ENSAPLG00000014387)	LCOR (ENSAPLG00000013561)	ENSAPLG00000019156
African ostrich	MODERN SPECIES	720	BLNK (ENSSCUG00000016866)	DNTT (ENSSCUG00000016857)	ENSSCUG00000016850	KNDC1 (ENSSCUG00000016841)	ADGRA1 (ENSSCUG00000016835)	ENSSCUG00000016833	ENTPD1 (ENSSCUG00000016826)	CPN1 (ENSSCUG00000016820) #14	DNMBP (ENSSCUG00000016813) #15	ENSSCUG00000016802	CUTC (ENSSCUG00000016780) #18	COX15 (ENSSCUG00000016774) #17	ENTPD7 (ENSSCUG00000016769) #19	SLC25A28 (ENSSCUG00000016765) #20	ENSSCUG00000016763	GOT1 (ENSSCUG00000016759) #22	ENSSCUG00000016758 #23	HPSE2 (ENSSCUG00000016749) #24
Australian saltwater crocodile	MODERN SPECIES	68	MARCHF5 (ENSCPRG00005014701)	CPEB3 (ENSCPRG00005014698)	BTAF1 (ENSCPRG00005013956)	ENSCPRG00005013876	ENSCPRG00005013875	ENSCPRG00005013869	ENSCPRG00005013866	CCNJ (ENSCPRG00005013862)	ZNF518A (ENSCPRG00005013859)	BLNK (ENSCPRG00005013845)	DNTT (ENSCPRG00005013837)	ENSCPRG00005013820	ENSCPRG00005013814	KNDC1 (ENSCPRG00005013776)	ADGRA1 (ENSCPRG00005013764)	GOT1 (ENSCPRG00005013741) #22	ENSCPRG00005013735 #23	HPSE2 (ENSCPRG00005013713) #24	HPS1 (ENSCPRG00005013698) #25	LOXL4 (ENSCPRG00005013693) #27	ENSCPRG00005013691 #28	CRTAC1 (ENSCPRG00005013685) #29	SFRP5 (ENSCPRG00005013682) #31	GOLGA7B (ENSCPRG00005013674) #30	ZFYVE27 (ENSCPRG00005013662) #32	MARVELD1 (ENSCPRG00005013655) #33	PI4K2A (ENSCPRG00005013650) #35	MORN4 (ENSCPRG00005013645) #36	HOGA1 (ENSCPRG00005013640)	ANKRD2 (ENSCPRG00005013635)	EXOSC1 (ENSCPRG00005013566)
Cryptodira	ANCESTRAL SPECIES	6				ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Testudinoidea	ANCESTRAL SPECIES	2				ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a.d #24	ENSGT00390000015298.f #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A	ENSGT00940000153956.b	ENSGT00940000158630
Testudinidae	ANCESTRAL SPECIES	9					ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a.c #24	ENSGT00390000004874.a.a.d #24	ENSGT00390000015298.f #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A	ENSGT00940000153956.b
Goode s thornscrub tortoise	MODERN SPECIES	21				TCTN3 (ENSGEVG00005002176)	ENSGEVG00005002315	ENTPD1 (ENSGEVG00005002324)	CPN1 (ENSGEVG00005002356) #14	DNMBP (ENSGEVG00005002430) #15	ENSGEVG00005002479	CUTC (ENSGEVG00005002589) #18	COX15 (ENSGEVG00005002611) #17	ATP6V0E2 (ENSGEVG00005002649)	ENTPD7 (ENSGEVG00005002666) #19	SLC25A28 (ENSGEVG00005002739) #20	NKX2-3 (ENSGEVG00005002751) #21	GOT1 (ENSGEVG00005002776) #22	CNNM1 (ENSGEVG00005002795) #23	HPSE2 (ENSGEVG00005002820) #24	HPS1 (ENSGEVG00005002869) #25	ENSGEVG00005002944 #26	ENSGEVG00005002965 #26	LOXL4 (ENSGEVG00005003041) #27	R3HCC1L (ENSGEVG00005003179) #28	ENSGEVG00005003202 #29	ENSGEVG00005003240 #30	ENSGEVG00005003246 #31	ZFYVE27 (ENSGEVG00005003269) #32	MARVELD1 (ENSGEVG00005003317) #33	AVPI1 (ENSGEVG00005003324) #34	PI4K2A (ENSGEVG00005003337) #35	MORN4 (ENSGEVG00005003350) #36
Abingdon island giant tortoise	MODERN SPECIES	2461							ENSCABG00000001964	ENSCABG00000001916	ENSCABG00000001833	USP18 (ENSCABG00000001776)	ENSCABG00000001766	ENSCABG00000001764	PEX26 (ENSCABG00000001761)	ENSCABG00000001758	NKX2-3 (ENSCABG00000001757) #21	GOT1 (ENSCABG00000000614) #22	CNNM1 (ENSCABG00000000554) #23	ENSCABG00000000541 #24
Emydidae	ANCESTRAL SPECIES	6				ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a.d #24	ENSGT00390000015298.f #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A	ENSGT00940000153956.b
Three-toed box turtle	MODERN SPECIES	39				ALDH18A1 (ENSTMTG00000006775)	TCTN3 (ENSTMTG00000006805)	ENTPD1 (ENSTMTG00000006868)	CPN1 (ENSTMTG00000000069) #14	DNMBP (ENSTMTG00000000118) #15	ENSTMTG00000000173	CUTC (ENSTMTG00000000254) #18	COX15 (ENSTMTG00000000300) #17	ATP6V0E2 (ENSTMTG00000000315)	ENTPD7 (ENSTMTG00000000338) #19	SLC25A28 (ENSTMTG00000000367) #20	NKX2-3 (ENSTMTG00000000388) #21	GOT1 (ENSTMTG00000000402) #22	CNNM1 (ENSTMTG00000000418) #23	HPSE2 (ENSTMTG00000000452) #24	HPS1 (ENSTMTG00000000563) #25	PYROXD2 (ENSTMTG00000000830) #26	ENSTMTG00000000900 #28	ZFYVE27 (ENSTMTG00000000937) #32	MARVELD1 (ENSTMTG00000001012) #33	AVPI1 (ENSTMTG00000001017) #34	PI4K2A (ENSTMTG00000001025) #35	ENSTMTG00000001035	MMS19 (ENSTMTG00000001309)	ZDHHC16 (ENSTMTG00000002566)	ARHGAP19 (ENSTMTG00000002583)	ENSTMTG00000002590	LCOR (ENSTMTG00000002602)
painted turtle	MODERN SPECIES	2388			ALDH18A1 (ENSCPBG00000012393)	TCTN3 (ENSCPBG00000012391)	ENTPD1 (ENSCPBG00000012386)	CPN1 (ENSCPBG00000012381) #14	DNMBP (ENSCPBG00000012299) #15	ENSCPBG00000012273	CUTC (ENSCPBG00000012259) #18	COX15 (ENSCPBG00000012256) #17	ENTPD7 (ENSCPBG00000012247) #19	ATP6V0E2 (ENSCPBG00000012242)	SLC25A28 (ENSCPBG00000012244) #20	ENSCPBG00000012240	NKX2-3 (ENSCPBG00000012238) #21	GOT1 (ENSCPBG00000012232) #22	CNNM1 (ENSCPBG00000012222) #23	ENSCPBG00000012218 #24	ENSCPBG00000012214 #24	ENSCPBG00000012212 #25	ENSCPBG00000012208 #25	PYROXD2 (ENSCPBG00000012204) #26	LOXL4 (ENSCPBG00000012198) #27	ENSCPBG00000012195 #28	CRTAC1 (ENSCPBG00000012190) #29	GOLGA7B (ENSCPBG00000012188) #30	ZFYVE27 (ENSCPBG00000012184) #32	MARVELD1 (ENSCPBG00000012178) #33	AVPI1 (ENSCPBG00000012176) #34	PI4K2A (ENSCPBG00000012171) #35	MORN4 (ENSCPBG00000012166) #36
Chinese turtle	MODERN SPECIES	1293																GOT1 (ENSPSIG00000005685) #22
Lepidosauria	ANCESTRAL SPECIES	8			ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000013063	ENSGT00940000161528	ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Laterata	ANCESTRAL SPECIES		ENSGT00390000013063	ENSGT00940000161528	ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00940000177979	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	13	ENSPMRG00000003455	DUSP28 (ENSPMRG00000003450)	ALDH18A1 (ENSPMRG00000003436)	TCTN3 (ENSPMRG00000003398)	ENTPD1 (ENSPMRG00000003388)	CPN1 (ENSPMRG00000003351) #14	DNMBP (ENSPMRG00000003333) #15	ENSPMRG00000003312	CUTC (ENSPMRG00000003293) #18	COX15 (ENSPMRG00000003281) #17	ATP6V0E2 (ENSPMRG00000003272)	ENTPD7 (ENSPMRG00000003262) #19	SLC25A28 (ENSPMRG00000003256) #20	NKX2-3 (ENSPMRG00000003244) #21	ENSPMRG00000003236	ENSPMRG00000003228 #22	CNNM1 (ENSPMRG00000003219) #23	HPSE2 (ENSPMRG00000003207) #24	HPS1 (ENSPMRG00000003174) #25	ENSPMRG00000003158	PYROXD2 (ENSPMRG00000003147) #26	LOXL4 (ENSPMRG00000003119) #27	R3HCC1L (ENSPMRG00000003100) #28	CRTAC1 (ENSPMRG00000003081) #29	GOLGA7B (ENSPMRG00000003064) #30	SFRP5 (ENSPMRG00000003057) #31	ZFYVE27 (ENSPMRG00000003032) #32	MARVELD1 (ENSPMRG00000003018) #33	AVPI1 (ENSPMRG00000003011) #34	PI4K2A (ENSPMRG00000002999) #35	MORN4 (ENSPMRG00000002981) #36
Common wall lizard	MODERN SPECIES	306																ENSPMRG00000019215 #22
Argentine black and white tegu	MODERN SPECIES	19	ENSSMRG00000021958	DUSP28 (ENSSMRG00000021957)	ALDH18A1 (ENSSMRG00000021956)	TCTN3 (ENSSMRG00000021955)	ENTPD1 (ENSSMRG00000021954)	CPN1 (ENSSMRG00000021953) #14	DNMBP (ENSSMRG00000021711) #15	ENSSMRG00000021710	CUTC (ENSSMRG00000021709) #18	COX15 (ENSSMRG00000021708) #17	ATP6V0E2 (ENSSMRG00000021707)	ENTPD7 (ENSSMRG00000021706) #19	SLC25A28 (ENSSMRG00000021705) #20	NKX2-3 (ENSSMRG00000021704) #21	ENSSMRG00000021703	GOT1 (ENSSMRG00000021702) #22	CNNM1 (ENSSMRG00000021701) #23	HPSE2 (ENSSMRG00000021700) #24	HPS1 (ENSSMRG00000021699) #25	PYROXD2 (ENSSMRG00000021698) #26	LOXL4 (ENSSMRG00000021697) #27	R3HCC1L (ENSSMRG00000021696) #28	CRTAC1 (ENSSMRG00000021695) #29	GOLGA7B (ENSSMRG00000021693) #30	SFRP5 (ENSSMRG00000021692) #31	ZFYVE27 (ENSSMRG00000021691) #32	MARVELD1 (ENSSMRG00000021690) #33	AVPI1 (ENSSMRG00000021689) #34	PI4K2A (ENSSMRG00000021688) #35	MORN4 (ENSSMRG00000021687) #36	HOGA1 (ENSSMRG00000021686)
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00530000063947.B	ENSGT00390000013063	ENSGT00940000161528	ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Elapidae	ANCESTRAL SPECIES	4	ENSGT00530000063947.B	ENSGT00390000013063	ENSGT00940000161528	ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Elapidae_a	ANCESTRAL SPECIES		ENSGT00530000063947.B	ENSGT00390000013063	ENSGT00940000161528	ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000164861	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00530000063947.B	ENSGT00390000013063	ENSGT00940000161528	ENSGT00500000044903	ENSGT00570000079101.a.a	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000164861	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36	ENSGT00530000063604.A
Eastern brown snake	MODERN SPECIES	16	MAP6D1 (ENSPTXG00000018043)	PARL (ENSPTXG00000018042)	ENSPTXG00000018041	DUSP28 (ENSPTXG00000018040)	ALDH18A1 (ENSPTXG00000018039)	TCTN3 (ENSPTXG00000018038)	ENTPD1 (ENSPTXG00000018037)	CPN1 (ENSPTXG00000018036) #14	ENSPTXG00000018035 #15	DNMBP (ENSPTXG00000018034) #15	ENSPTXG00000013275	CUTC (ENSPTXG00000013237) #18	ATP6V0E2 (ENSPTXG00000013236)	ENTPD7 (ENSPTXG00000018586) #19	SLC25A28 (ENSPTXG00000018585) #20	GOT1 (ENSPTXG00000018584) #22	CNNM1 (ENSPTXG00000018566) #23	HPSE2 (ENSPTXG00000018561) #24	HPS1 (ENSPTXG00000018557) #25	ENSPTXG00000018513	LOXL4 (ENSPTXG00000018477) #27	R3HCC1L (ENSPTXG00000018476) #28	CRTAC1 (ENSPTXG00000018473) #29	GOLGA7B (ENSPTXG00000018471) #30	SFRP5 (ENSPTXG00000018469) #31	ZFYVE27 (ENSPTXG00000018467) #32	MARVELD1 (ENSPTXG00000018465) #33	AVPI1 (ENSPTXG00000018464) #34	PI4K2A (ENSPTXG00000018462) #35	MORN4 (ENSPTXG00000018460) #36	HOGA1 (ENSPTXG00000018458)
Mainland tiger snake	MODERN SPECIES		PARL (ENSNSUG00000010889)	ENSNSUG00000010887	DUSP28 (ENSNSUG00000010886)	ALDH18A1 (ENSNSUG00000010719)	TCTN3 (ENSNSUG00000010698)	ENTPD1 (ENSNSUG00000010696)	CPN1 (ENSNSUG00000010695) #14	DNMBP (ENSNSUG00000010693) #15	ENSNSUG00000007693	CUTC (ENSNSUG00000007671) #18	COX15 (ENSNSUG00000007670) #17	ATP6V0E2 (ENSNSUG00000007665)	ENTPD7 (ENSNSUG00000007636) #19	SLC25A28 (ENSNSUG00000007635) #20	NKX2-3 (ENSNSUG00000007632) #21	GOT1 (ENSNSUG00000007630) #22	CNNM1 (ENSNSUG00000007490) #23	HPSE2 (ENSNSUG00000007487) #24	HPS1 (ENSNSUG00000007471) #25	ENSNSUG00000007463	LOXL4 (ENSNSUG00000007419) #27	R3HCC1L (ENSNSUG00000007415) #28	CRTAC1 (ENSNSUG00000007402) #29	GOLGA7B (ENSNSUG00000007400) #30	SFRP5 (ENSNSUG00000007389) #31	ZFYVE27 (ENSNSUG00000007388) #32	MARVELD1 (ENSNSUG00000007387) #33	AVPI1 (ENSNSUG00000007386) #34	PI4K2A (ENSNSUG00000007385) #35	MORN4 (ENSNSUG00000007384) #36	HOGA1 (ENSNSUG00000007381)
Blue-lipped sea krait	MODERN SPECIES	9700																GOT1 (ENSLLTG00000012539) #22	CNNM1 (ENSLLTG00000011520) #23
Indian cobra	MODERN SPECIES	3	PARL (ENSNNAG00000007735)	ENSNNAG00000007711	DUSP28 (ENSNNAG00000007679)	ALDH18A1 (ENSNNAG00000005661)	TCTN3 (ENSNNAG00000005494)	ENTPD1 (ENSNNAG00000005470)	CPN1 (ENSNNAG00000005446) #14	DNMBP (ENSNNAG00000005362) #15	ENSNNAG00000004263	CUTC (ENSNNAG00000004119) #18	COX15 (ENSNNAG00000004090) #17	ATP6V0E2 (ENSNNAG00000004073)	ENTPD7 (ENSNNAG00000004035) #19	SLC25A28 (ENSNNAG00000004021) #20	NKX2-3 (ENSNNAG00000004007) #21	GOT1 (ENSNNAG00000003975) #22	CNNM1 (ENSNNAG00000003938) #23	ENSNNAG00000003927 #24	ENSNNAG00000003872 #24	HPS1 (ENSNNAG00000003839) #25	PYROXD2 (ENSNNAG00000003519) #26	ENSNNAG00000003322 #27	R3HCC1L (ENSNNAG00000003273) #28	CRTAC1 (ENSNNAG00000003254) #29	GOLGA7B (ENSNNAG00000003241) #30	SFRP5 (ENSNNAG00000003224) #31	ZFYVE27 (ENSNNAG00000003209) #32	MARVELD1 (ENSNNAG00000003201) #33	ENSNNAG00000003189 #34	PI4K2A (ENSNNAG00000003173) #35	MORN4 (ENSNNAG00000003159) #36
Lizard	MODERN SPECIES	2	PARL (ENSACAG00000004648)	ENSACAG00000028796	DUSP28 (ENSACAG00000045538)	ALDH18A1 (ENSACAG00000004480)	ENSACAG00000004453	ENTPD1 (ENSACAG00000004301)	ENSACAG00000004193 #14	DNMBP (ENSACAG00000004166) #15	ENSACAG00000003972	ENSACAG00000003797 #18	COX15 (ENSACAG00000003767) #17	ENSACAG00000026586	ENTPD7 (ENSACAG00000003702) #19	SLC25A28 (ENSACAG00000003687) #20	NKX2-3 (ENSACAG00000034886) #21	GOT1 (ENSACAG00000003583) #22	CNNM1 (ENSACAG00000003524) #23	HPSE2 (ENSACAG00000003429) #24	ENSACAG00000039564	HPS1 (ENSACAG00000002534) #25	ENSACAG00000042996	PYROXD2 (ENSACAG00000003367) #26	LOXL4 (ENSACAG00000003263) #27	R3HCC1L (ENSACAG00000003217) #28	CRTAC1 (ENSACAG00000003141) #29	GOLGA7B (ENSACAG00000028949) #30	SFRP5 (ENSACAG00000003105) #31	ZFYVE27 (ENSACAG00000003048) #32	MARVELD1 (ENSACAG00000003046) #33	AVPI1 (ENSACAG00000027657) #34	PI4K2A (ENSACAG00000002964) #35
tuatara	MODERN SPECIES	1056								CPN1 (ENSSPUG00000014172) #14	DNMBP (ENSSPUG00000014122) #15	ENSSPUG00000013623	CUTC (ENSSPUG00000013469) #18	COX15 (ENSSPUG00000013395) #17	ENSSPUG00000013368	SLC25A28 (ENSSPUG00000013238) #20	NKX2-3 (ENSSPUG00000013168) #21	GOT1 (ENSSPUG00000013156) #22	CNNM1 (ENSSPUG00000013124) #23	HPSE2 (ENSSPUG00000013059) #24	HPS1 (ENSSPUG00000013028) #25	ENSSPUG00000012961 #28	CRTAC1 (ENSSPUG00000012944) #29	GOLGA7B (ENSSPUG00000012927) #30	SFRP5 (ENSSPUG00000012919) #31	ZFYVE27 (ENSSPUG00000012905) #32	MARVELD1 (ENSSPUG00000012901) #33	AVPI1 (ENSSPUG00000012899) #34	PI4K2A (ENSSPUG00000012888) #35	MORN4 (ENSSPUG00000012878) #36	HOGA1 (ENSSPUG00000012791)	ANKRD2 (ENSSPUG00000012723)	UBTD1 (ENSSPUG00000012702)
Anura	ANCESTRAL SPECIES	25					ENSGT00500000044903	ENSGT01100000263542.C	ENSGT00940000158235 #14	ENSGT00950000183088.a.b.a #15	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00390000011684 #26	ENSGT00940000161036.B	ENSGT00940000157042 #27	ENSGT00530000063711.b #28	ENSGT00390000013726 #29	ENSGT00390000000134.a #30	ENSGT00940000160608 #31	ENSGT00390000013298 #32	ENSGT00510000049375 #33	ENSGT00510000049872 #34	ENSGT00390000010434.b #35	ENSGT00730000111173 #36
Frog	MODERN SPECIES	7	cep55 (ENSXETG00000035829)	myof.1 (ENSXETG00000003734)	pcdh8l (ENSXETG00000003735)	entpd1 (ENSXETG00000003736)	cpn1 (ENSXETG00000003737) #14	dnmbp (ENSXETG00000003739) #15	abcc2 (ENSXETG00000003740)	cox15 (ENSXETG00000003745) #17	cutc (ENSXETG00000003744) #18	entpd7 (ENSXETG00000003746) #19	slc25a28 (ENSXETG00000035534) #20	nkx3-3 (ENSXETG00000018432)	nkx2-3 (ENSXETG00000036831) #21	ENSXETG00000043602	ENSXETG00000048822	got1 (ENSXETG00000018428) #22	ENSXETG00000043400	cnnm1 (ENSXETG00000018427) #23	hpse2 (ENSXETG00000018422) #24	hps1 (ENSXETG00000036836) #25	pyroxd2 (ENSXETG00000018402) #26	ENSXETG00000033896	loxl4 (ENSXETG00000015828) #27	r3hcc1l (ENSXETG00000038254) #28	ENSXETG00000042342	crtac1 (ENSXETG00000030508) #29	golga7b (ENSXETG00000039738) #30	sfrp5 (ENSXETG00000024699) #31	zfyve27 (ENSXETG00000013529) #32	ENSXETG00000043898	marveld1 (ENSXETG00000042369) #33
Leishan spiny toad	MODERN SPECIES	9	TEX36 (ENSLLEG00000016765)	ALDH18A1 (ENSLLEG00000016471)	ENTPD1 (ENSLLEG00000016172)	CPN1 (ENSLLEG00000016076) #14	DNMBP (ENSLLEG00000015304) #15	ENSLLEG00000015069	CUTC (ENSLLEG00000024824) #18	COX15 (ENSLLEG00000024720) #17	ATP6V0E2 (ENSLLEG00000024672)	ENSLLEG00000024655	ENTPD7 (ENSLLEG00000024551) #19	SLC25A28 (ENSLLEG00000024415) #20	ENSLLEG00000024359	ENSLLEG00000024314	ENSLLEG00000024278 #21	GOT1 (ENSLLEG00000024001) #22	CNNM1 (ENSLLEG00000023809) #23	HPSE2 (ENSLLEG00000023742) #24	HPS1 (ENSLLEG00000023369) #25	ENSLLEG00000023225	LOXL4 (ENSLLEG00000023007) #27	R3HCC1L (ENSLLEG00000022943) #28	CRTAC1 (ENSLLEG00000021817) #29	SFRP5 (ENSLLEG00000021734) #31	GOLGA7B (ENSLLEG00000021577) #30	ENSLLEG00000021541	ENSLLEG00000021410 #32	ENSLLEG00000021381	ENSLLEG00000021312	ENSLLEG00000021261	MARVELD1 (ENSLLEG00000021232) #33
Coelacanth	MODERN SPECIES	956				ENTPD1 (ENSLACG00000003524)	CPN1 (ENSLACG00000004583) #14	DNMBP (ENSLACG00000005565) #15	ENSLACG00000008348	CUTC (ENSLACG00000009503) #18	ENSLACG00000010566	ENTPD7 (ENSLACG00000010971) #19	SLC25A28 (ENSLACG00000011624) #20	ENSLACG00000012533	nkx3.3 (ENSLACG00000012763)	ENSLACG00000013129 #21	PI4K2A (ENSLACG00000013641) #35	GOT1 (ENSLACG00000013959) #22	CNNM1 (ENSLACG00000014142) #23
Actinopterygii	ANCESTRAL SPECIES	47	ENSGT00510000049872 #34	ENSGT00390000013298 #32	ENSGT00940000160608 #31	ENSGT00390000000134.a #30	ENSGT00390000013726 #29	ENSGT00530000063711.b #28	ENSGT00940000157042 #27	ENSGT00940000161036.B	ENSGT00940000164861	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00530000063604.A	ENSGT00730000111173 #36	ENSGT00940000175336	ENSGT00940000162611.b	ENSGT00940000162611.a	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331	ENSGT01100000263518.A.b	ENSGT00940000164383
Neopterygii	ANCESTRAL SPECIES	18	ENSGT00510000049872 #34	ENSGT00390000013298 #32	ENSGT00940000160608 #31	ENSGT00390000000134.a #30	ENSGT00390000013726 #29	ENSGT00530000063711.b #28	ENSGT00940000157042 #27	ENSGT00940000161036.B	ENSGT00940000164861	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556 #21	ENSGT00950000183082.b.b.b #22	ENSGT00940000157525 #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00530000063604.A	ENSGT00730000111173 #36	ENSGT00940000175336	ENSGT00940000162611.b	ENSGT00940000162611.a	ENSGT00940000154965.A	ENSGT00940000170319	ENSGT00940000157322.b.a	ENSGT00940000157331	ENSGT01100000263518.A.b
Spotted gar	MODERN SPECIES	671	zgc:171482 (ENSLOCG00000008863)	zfyve27 (ENSLOCG00000008885) #32	sfrp5 (ENSLOCG00000008904) #31	golga7ba (ENSLOCG00000008912) #30	crtac1a (ENSLOCG00000008921) #29	ENSLOCG00000008944 #28	LOXL4 (ENSLOCG00000008953) #27	zgc:123010 (ENSLOCG00000008967)	PYROXD2 (ENSLOCG00000008976) #26	atpv0e2 (ENSLOCG00000008982)	ENSLOCG00000008992	ENTPD7 (ENSLOCG00000009002) #19	slc25a28 (ENSLOCG00000009024) #20	nkx3.3 (ENSLOCG00000009031)	nkx2.3 (ENSLOCG00000009050) #21	got1 (ENSLOCG00000009054) #22	CNNM1 (ENSLOCG00000009070) #23	HPSE2 (ENSLOCG00000009078) #24	hps1 (ENSLOCG00000009087) #25	st3gal7 (ENSLOCG00000009100)	ENSLOCG00000009110	ddx21 (ENSLOCG00000009123)	irf1a (ENSLOCG00000009136)	kifbp (ENSLOCG00000009142)	vps26a (ENSLOCG00000009150)	supv3l1 (ENSLOCG00000009159)	hkdc1 (ENSLOCG00000009177)	hk1 (ENSLOCG00000009187)	tacr2 (ENSLOCG00000009218)	tspan15 (ENSLOCG00000009224)	rufy2 (ENSLOCG00000009235)
Reedfish	MODERN SPECIES	10	golga7ba (ENSECRG00000000836) #30	crtac1a (ENSECRG00000000875) #29	ENSECRG00000000944 #28	LOXL4 (ENSECRG00000000973) #27	zgc:123010 (ENSECRG00000001005)	pyroxd2 (ENSECRG00000001046)	ATP6V0E2 (ENSECRG00000001091)	ENSECRG00000001109	ENTPD7 (ENSECRG00000001134) #19	slc25a28 (ENSECRG00000001160) #20	slc25a28 (ENSECRG00000001191) #20	ENSECRG00000001202	nkx3.3 (ENSECRG00000001214)	ENSECRG00000001225 #21	ENSECRG00000001228	got1 (ENSECRG00000001233) #22	CNNM1 (ENSECRG00000001361) #23	HPSE2 (ENSECRG00000001676) #24	hps1 (ENSECRG00000001819) #25	st3gal7 (ENSECRG00000001866)	ANKRD2 (ENSECRG00000001895)	hoga1 (ENSECRG00000001937)	morn4 (ENSECRG00000001966) #36	ENSECRG00000001980	ENSECRG00000001987	ENSECRG00000001996	slit1a (ENSECRG00000002016)	ARHGAP19 (ENSECRG00000002058)	ENSECRG00000002079	ENSECRG00000002106	ENSECRG00000002141
Euteleostomi	DUPLICATION
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.a ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.a ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES	213	ENSGT00510000049872 #34	ENSGT00730000112219	ENSGT00970000193827	ENSGT00510000049375 #33	ENSGT00940000165757	ENSGT00390000013298 #32	ENSGT00940000160608 #31	ENSGT00390000000134.a #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B	ENSGT00940000164861	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b
Osteoglossiformes	ANCESTRAL SPECIES	177	ENSGT00510000049375.b #33	ENSGT00940000165757.b	ENSGT00940000165757.a.b	ENSGT00390000013298 #32	ENSGT00940000160608.d #31	ENSGT00390000000134.a #30	ENSGT00390000013726.d #29	ENSGT00530000063711.b #28	ENSGT00940000157042.c.b #27	ENSGT00940000161036.B	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.b #20	ENSGT00940000157556.a.a.a #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00940000162611.b	ENSGT00940000162611.a	ENSGT00940000154965.A	ENSGT00940000157322.b.a.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.b.i.a	ENSGT00390000002554.ab	ENSGT00390000001546.e	ENSGT00530000063586.a	ENSGT00390000005639.a.b.b.b
P. kingsleyae	MODERN SPECIES	18	cdc25d (ENSPKIG00000015992)	ENSPKIG00000015982	pi4k2a (ENSPKIG00000015941) #35	marveld1 (ENSPKIG00000015922) #33	ENSPKIG00000015911	zfyve27 (ENSPKIG00000015847) #32	sfrp5 (ENSPKIG00000015815) #31	golga7ba (ENSPKIG00000015794) #30	ENSPKIG00000015770 #28	LOXL4 (ENSPKIG00000015645) #27	zgc:123010 (ENSPKIG00000015521)	atpv0e2 (ENSPKIG00000015481)	ENSPKIG00000015431	ENTPD7 (ENSPKIG00000015335) #19	ENSPKIG00000015279 #21	got1 (ENSPKIG00000015231) ##22	CNNM1 (ENSPKIG00000015185) #23	hoga1 (ENSPKIG00000015141)	ENSPKIG00000015112	ENSPKIG00000015096	slit1a (ENSPKIG00000014953)	ARHGAP19 (ENSPKIG00000014888)	ENSPKIG00000014871	KCNIP2 (ENSPKIG00000014808)	armh3 (ENSPKIG00000014676)	HPS6 (ENSPKIG00000014625)	ldb1a (ENSPKIG00000014537)	map2k6 (ENSPKIG00000014459)	kcnj2a (ENSPKIG00000014425)	KCNJ16 (ENSPKIG00000014415)	galr2a (ENSPKIG00000014369)
Asian bonytongue	MODERN SPECIES	23	exosc1 (ENSSFOG00015016289)	ENSSFOG00015016277	pi4k2a (ENSSFOG00015016255) #35	ENSSFOG00015016242	marveld1 (ENSSFOG00015016233) #33	ENSSFOG00015029493	ENSSFOG00015016149	sfrp5 (ENSSFOG00015016130) #31	CRTAC1 (ENSSFOG00015016089) #29	ENSSFOG00015016044 #27	pyroxd2 (ENSSFOG00015015984)	ENSSFOG00015015940	slc25a28 (ENSSFOG00015015925) #20	nkx3.3 (ENSSFOG00015032059)	ENSSFOG00015032867 #21	got1 (ENSSFOG00015015891) ##22	HPSE2 (ENSSFOG00015015866) #24	hps1 (ENSSFOG00015015808) #25	ENSSFOG00015015789	ENSSFOG00015029523	ENSSFOG00015031827	ENSSFOG00015015746	slit1a (ENSSFOG00015015642)	ENSSFOG00015015619	ENSSFOG00015015558	cutc (ENSSFOG00015025714) #18	cox15 (ENSSFOG00015015485) #17	KCNIP2 (ENSSFOG00015015460)	ENSSFOG00015032288	ARMH3 (ENSSFOG00015015360)	HPS6 (ENSSFOG00015026018)
Clupeocephala	ANCESTRAL SPECIES	91	ENSGT00940000155032.k	ENSGT00390000000464	ENSGT00970000193827	ENSGT00510000049375 #33	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	68	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00730000112219	ENSGT00510000049375 #33	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000170319	ENSGT00940000162611.a.b	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00940000179277
Acanthomorphata	ANCESTRAL SPECIES	16					ENSGT00940000175215.a.a	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000170319	ENSGT00940000162611.a.b	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18
Euacanthomorphacea	ANCESTRAL SPECIES	6	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000175336.a	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000175336.a	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18
Tiger tail seahorse	MODERN SPECIES	108	BFSP1 (ENSHCOG00000018001)	prokr1b (ENSHCOG00000018020)	plek (ENSHCOG00000018052)	ENSHCOG00000018066	zgc:171482 (ENSHCOG00000018086)	ENSHCOG00000018091	sfrp5 (ENSHCOG00000018105) #31	GOLGA7B (ENSHCOG00000018123) #30	CRTAC1 (ENSHCOG00000018161) #29	ENSHCOG00000018186 #27	ENSHCOG00000018200 #27	zgc:123010 (ENSHCOG00000018210)	pyroxd2 (ENSHCOG00000018248)	slc25a28 (ENSHCOG00000018276) #20	nkx2.3 (ENSHCOG00000018280) #21	got1 (ENSHCOG00000018316) ##22	CNNM1 (ENSHCOG00000018366) #23	HPSE2 (ENSHCOG00000018471) #24	hps1 (ENSHCOG00000018534) #25	st3gal7 (ENSHCOG00000018649)	st3gal7 (ENSHCOG00000000764)	ENSHCOG00000018725	ENSHCOG00000018739	ENSHCOG00000018769	slit1a (ENSHCOG00000018867)	ARHGAP19 (ENSHCOG00000018882)	ENSHCOG00000018973	cutc (ENSHCOG00000019004) #18	cox15 (ENSHCOG00000019028) #17	KCNIP2 (ENSHCOG00000019056)	HPS6 (ENSHCOG00000019085)
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000175336.a	ENSGT00940000168493	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000175336.a	ENSGT00940000168493	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383.g	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT00940000164383.h	ENSGT00940000179277	ENSGT00940000164383.g	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b.i.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT00940000164383.h.a	ENSGT00940000179277	ENSGT00940000164383.g	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b.i.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT00940000164383.h.a	ENSGT00940000179277	ENSGT00940000164383.g	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b.i.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT00940000164383.h.a	ENSGT00940000179277	ENSGT00940000164383.g	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Zebra mbuna	MODERN SPECIES	1095	ENSMZEG00005027709	ENSMZEG00005027714	pgam1a (ENSMZEG00005027718)	marveld1 (ENSMZEG00005027719) #33	ENSMZEG00005027720	zgc:171482 (ENSMZEG00005027721)	sfrp5 (ENSMZEG00005027723) #31	golga7ba (ENSMZEG00005027725) #30	CRTAC1 (ENSMZEG00005027727) #29	LOXL4 (ENSMZEG00005027731) #27	zgc:123010 (ENSMZEG00005027733)	pyroxd2 (ENSMZEG00005027734)	slc25a28 (ENSMZEG00005027738) #20	nkx3.3 (ENSMZEG00005027739)	nkx2.3 (ENSMZEG00005027740) #21	got1 (ENSMZEG00005027741) ##22	CNNM1 (ENSMZEG00005027743) #23	HPSE2 (ENSMZEG00005027745) #24	hps1 (ENSMZEG00005027746) #25	st3gal7 (ENSMZEG00005027749)	ENSMZEG00005027751	morn4 (ENSMZEG00005027754) #36	ENSMZEG00005027756	ENSMZEG00005000159	slit1a (ENSMZEG00005000186)	ARHGAP19 (ENSMZEG00005000419)	ENSMZEG00005000431	ENSMZEG00005000570	ENSMZEG00005000717	cutc (ENSMZEG00005000833) #18	cox15 (ENSMZEG00005000858) #17
Eastern happy	MODERN SPECIES	4	ENSACLG00000010571	pgam1a (ENSACLG00000010556)	marveld1 (ENSACLG00000010546) #33	ENSACLG00000010535	ENSACLG00000010524	zgc:171482 (ENSACLG00000010511)	sfrp5 (ENSACLG00000010486) #31	golga7ba (ENSACLG00000010439) #30	CRTAC1 (ENSACLG00000010222) #29	LOXL4 (ENSACLG00000010205) #27	zgc:123010 (ENSACLG00000010188)	pyroxd2 (ENSACLG00000010143)	slc25a28 (ENSACLG00000010128) #20	nkx3.3 (ENSACLG00000010124)	nkx2.3 (ENSACLG00000010118) #21	got1 (ENSACLG00000010095) ##22	CNNM1 (ENSACLG00000010047) #23	HPSE2 (ENSACLG00000009957) #24	hps1 (ENSACLG00000009914) #25	st3gal7 (ENSACLG00000009905)	ENSACLG00000009554	morn4 (ENSACLG00000009540) #36	ENSACLG00000009527	ENSACLG00000009523	slit1a (ENSACLG00000009382)	ARHGAP19 (ENSACLG00000009372)	ENSACLG00000008907	ENSACLG00000008892	ENSACLG00000008876 #16	ENSACLG00000008527	cutc (ENSACLG00000008109) #18
P. nyererei	MODERN SPECIES	431	zfand4 (ENSPNYG00000007604)	ENSPNYG00000007646	ENSPNYG00000007729	pgam1a (ENSPNYG00000007741)	ENSPNYG00000007749	marveld1 (ENSPNYG00000007758) #33	zgc:171482 (ENSPNYG00000007773)	sfrp5 (ENSPNYG00000007783) #31	golga7ba (ENSPNYG00000007803) #30	CRTAC1 (ENSPNYG00000007818) #29	LOXL4 (ENSPNYG00000007859) #27	zgc:123010 (ENSPNYG00000007893)	pyroxd2 (ENSPNYG00000007911)	slc25a28 (ENSPNYG00000007955) #20	nkx3.3 (ENSPNYG00000008015)	got1 (ENSPNYG00000008027) ##22	CNNM1 (ENSPNYG00000008062) #23	HPSE2 (ENSPNYG00000008110) #24	hps1 (ENSPNYG00000008230) #25	st3gal7 (ENSPNYG00000008303)	ENSPNYG00000008397	morn4 (ENSPNYG00000008589) #36	ENSPNYG00000008602	ENSPNYG00000008611	slit1a (ENSPNYG00000008647)	ARHGAP19 (ENSPNYG00000008747)	ENSPNYG00000008765	ENSPNYG00000008805	cutc (ENSPNYG00000008909) #18	cox15 (ENSPNYG00000009012) #17	KCNIP2 (ENSPNYG00000009028)
Burton s mouthbrooder	MODERN SPECIES	275	ENSHBUG00000023180	ENSHBUG00000023217	pgam1a (ENSHBUG00000023233)	marveld1 (ENSHBUG00000023250) #33	ENSHBUG00000000713	zgc:171482 (ENSHBUG00000023289)	sfrp5 (ENSHBUG00000023302) #31	golga7ba (ENSHBUG00000023337) #30	CRTAC1 (ENSHBUG00000023382) #29	LOXL4 (ENSHBUG00000023431) #27	zgc:123010 (ENSHBUG00000023501)	pyroxd2 (ENSHBUG00000023594)	slc25a28 (ENSHBUG00000023629) #20	nkx3.3 (ENSHBUG00000023635)	nkx2.3 (ENSHBUG00000023642) #21	got1 (ENSHBUG00000023679) ##22	CNNM1 (ENSHBUG00000023711) #23	HPSE2 (ENSHBUG00000023726) #24	hps1 (ENSHBUG00000023838) #25	st3gal7 (ENSHBUG00000002137)	ENSHBUG00000002190	morn4 (ENSHBUG00000002213) #36	ENSHBUG00000002221	ENSHBUG00000002232	slit1a (ENSHBUG00000000037)	ARHGAP19 (ENSHBUG00000002367)	ENSHBUG00000002385
Lyretail cichlid	MODERN SPECIES	295	ENSNBRG00000020995	pgam1a (ENSNBRG00000021002)	ENSNBRG00000021015	marveld1 (ENSNBRG00000021023) #33	zgc:171482 (ENSNBRG00000021035)	sfrp5 (ENSNBRG00000021056) #31	golga7ba (ENSNBRG00000021066) #30	CRTAC1 (ENSNBRG00000021083) #29	ENSNBRG00000021101 #27	ENSNBRG00000021119 #27	ENSNBRG00000021137 #27	zgc:123010 (ENSNBRG00000021157)	pyroxd2 (ENSNBRG00000021183)	slc25a28 (ENSNBRG00000021206) #20	nkx3.3 (ENSNBRG00000021221)	got1 (ENSNBRG00000021229) ##22	CNNM1 (ENSNBRG00000021257) #23	HPSE2 (ENSNBRG00000021291) #24	hps1 (ENSNBRG00000021417) #25	st3gal7 (ENSNBRG00000021500)	ENSNBRG00000021512	morn4 (ENSNBRG00000021528) #36	ENSNBRG00000021544	slit1a (ENSNBRG00000021572)	ENSNBRG00000021644
Nile tilapia	MODERN SPECIES	4	zfand4 (ENSONIG00000018374)	ENSONIG00000018368	pgam1a (ENSONIG00000018366)	marveld1 (ENSONIG00000033243) #33	ENSONIG00000033910	zgc:171482 (ENSONIG00000018365)	sfrp5 (ENSONIG00000018364) #31	golga7ba (ENSONIG00000018362) #30	CRTAC1 (ENSONIG00000018358) #29	LOXL4 (ENSONIG00000018355) #27	zgc:123010 (ENSONIG00000018353)	pyroxd2 (ENSONIG00000018349)	slc25a28 (ENSONIG00000034190) #20	nkx3.3 (ENSONIG00000018347)	nkx2-3 (ENSONIG00000034563) #21	got1 (ENSONIG00000018342) ##22	ENSONIG00000030907	CNNM1 (ENSONIG00000018340) #23	HPSE2 (ENSONIG00000018339) #24	hps1 (ENSONIG00000018337) #25	st3gal7 (ENSONIG00000018336)	ENSONIG00000018333	morn4 (ENSONIG00000018332) #36	ENSONIG00000030690	ENSONIG00000018331	ENSONIG00000039949	slit1a (ENSONIG00000018325)	ARHGAP19 (ENSONIG00000018324)	ENSONIG00000018323	ENSONIG00000030995	ENSONIG00000030255
Midas cichlid	MODERN SPECIES	452	zfand4 (ENSACIG00000021402)	ENSACIG00000021418	ENSACIG00000021475	ENSACIG00000021489	marveld1 (ENSACIG00000021493) #33	ENSACIG00000021502	zgc:171482 (ENSACIG00000021512)	sfrp5 (ENSACIG00000021531) #31	golga7ba (ENSACIG00000021626) #30	CRTAC1 (ENSACIG00000021638) #29	LOXL4 (ENSACIG00000021656) #27	zgc:123010 (ENSACIG00000021684)	pyroxd2 (ENSACIG00000021717)	slc25a28 (ENSACIG00000021745) #20	nkx3.3 (ENSACIG00000021761)	got1 (ENSACIG00000021770) ##22	CNNM1 (ENSACIG00000021793) #23	HPSE2 (ENSACIG00000021851) #24	hps1 (ENSACIG00000021933) #25	st3gal7 (ENSACIG00000021971)	ENSACIG00000022013	ENSACIG00000022140	ENSACIG00000022148	ENSACIG00000022157	slit1a (ENSACIG00000022168)	ARHGAP19 (ENSACIG00000022216)	ENSACIG00000022233	ENSACIG00000022241	ENSACIG00000022277	cutc (ENSACIG00000022346) #18	cox15 (ENSACIG00000022369) #17
Pomacentridae	ANCESTRAL SPECIES	9	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000170319	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18
Pomacentridae_A	ANCESTRAL SPECIES	7	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Amphiprion	ANCESTRAL SPECIES	13	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Clown anemonefish	MODERN SPECIES	1706							sfrp5 (ENSAOCG00000006022) #31	golga7ba (ENSAOCG00000006018) #30	CRTAC1 (ENSAOCG00000000280) #29	LOXL4 (ENSAOCG00000005959) #27	zgc:123010 (ENSAOCG00000005910)	pyroxd2 (ENSAOCG00000005899)	slc25a28 (ENSAOCG00000002502) #20	nkx3.3 (ENSAOCG00000005851)	nkx2.3 (ENSAOCG00000005843) #21	got1 (ENSAOCG00000005822) ##22	CNNM1 (ENSAOCG00000005791) #23	HPSE2 (ENSAOCG00000005770) #24	hps1 (ENSAOCG00000005652) #25	st3gal7 (ENSAOCG00000005559)	ANKRD2 (ENSAOCG00000005542)	morn4 (ENSAOCG00000005518) #36	ENSAOCG00000005501	ENSAOCG00000005488
Orange clownfish	MODERN SPECIES	12	ENSAPEG00000013906	ENSAPEG00000014065	pgam1a (ENSAPEG00000014092)	marveld1 (ENSAPEG00000014120) #33	ENSAPEG00000014131	zgc:171482 (ENSAPEG00000014154)	sfrp5 (ENSAPEG00000014169) #31	golga7ba (ENSAPEG00000014181) #30	CRTAC1 (ENSAPEG00000014202) #29	LOXL4 (ENSAPEG00000014247) #27	zgc:123010 (ENSAPEG00000014305)	pyroxd2 (ENSAPEG00000014336)	slc25a28 (ENSAPEG00000014360) #20	nkx3.3 (ENSAPEG00000014379)	nkx2.3 (ENSAPEG00000014383) #21	got1 (ENSAPEG00000014394) ##22	ENSAPEG00000014414	CNNM1 (ENSAPEG00000014434) #23	HPSE2 (ENSAPEG00000014449) #24	hps1 (ENSAPEG00000014624) #25	st3gal7 (ENSAPEG00000014662)	ANKRD2 (ENSAPEG00000014682)	morn4 (ENSAPEG00000014710) #36	ENSAPEG00000014735	ENSAPEG00000014749	slit1a (ENSAPEG00000014782)	ARHGAP19 (ENSAPEG00000014919)	ENSAPEG00000014964	ENSAPEG00000014998	cutc (ENSAPEG00000015138) #18	cox15 (ENSAPEG00000015197) #17
Spiny chromis	MODERN SPECIES	279									CRTAC1 (ENSAPOG00000019545) #29	LOXL4 (ENSAPOG00000000560) #27	zgc:123010 (ENSAPOG00000019633)	pyroxd2 (ENSAPOG00000019643)	slc25a28 (ENSAPOG00000019664) #20	nkx3.3 (ENSAPOG00000019669)	nkx2.3 (ENSAPOG00000019713) #21	got1 (ENSAPOG00000019764) ##22	CNNM1 (ENSAPOG00000019783) #23	HPSE2 (ENSAPOG00000020015) #24	hps1 (ENSAPOG00000020112) #25	st3gal7 (ENSAPOG00000020131)	ANKRD2 (ENSAPOG00000020286)	morn4 (ENSAPOG00000020325) #36	ENSAPOG00000020337	ENSAPOG00000020357	slit1a (ENSAPOG00000020593)	ARHGAP19 (ENSAPOG00000020600)	ENSAPOG00000020777	cutc (ENSAPOG00000020837) #18	cox15 (ENSAPOG00000020881) #17	KCNIP2 (ENSAPOG00000020916)
Bicolor damselfish	MODERN SPECIES	405	ENSSPAG00000013847	ENSSPAG00000013802	pgam1a (ENSSPAG00000013780)	marveld1 (ENSSPAG00000013765) #33	ENSSPAG00000013756	zgc:171482 (ENSSPAG00000013724)	sfrp5 (ENSSPAG00000013711) #31	golga7ba (ENSSPAG00000013700) #30	CRTAC1 (ENSSPAG00000013676) #29	LOXL4 (ENSSPAG00000013636) #27	zgc:123010 (ENSSPAG00000013621)	pyroxd2 (ENSSPAG00000013568)	slc25a28 (ENSSPAG00000013538) #20	nkx3.3 (ENSSPAG00000013532)	nkx2.3 (ENSSPAG00000013515) #21	got1 (ENSSPAG00000013469) ##22	CNNM1 (ENSSPAG00000013414) #23	HPSE2 (ENSSPAG00000013299) #24	hps1 (ENSSPAG00000013226) #25	st3gal7 (ENSSPAG00000013210)	ENSSPAG00000013147	morn4 (ENSSPAG00000013126) #36	ENSSPAG00000013113	ENSSPAG00000013103	ENSSPAG00000013092
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000175336.a	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000175336.a	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Aplocheiloidei	ANCESTRAL SPECIES	43	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT00940000180462	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a	ENSGT00390000001546
Mangrove rivulus	MODERN SPECIES	23							sfrp5 (ENSKMAG00000021414) #31	golga7ba (ENSKMAG00000021404) #30	CRTAC1 (ENSKMAG00000021378) #29	ENSKMAG00000021365 #27	zgc:123010 (ENSKMAG00000021350)	pyroxd2 (ENSKMAG00000021330)	slc25a28 (ENSKMAG00000021320) #20	nkx3.3 (ENSKMAG00000021316)	nkx2.3 (ENSKMAG00000021312) #21	got1 (ENSKMAG00000021303) ##22	CNNM1 (ENSKMAG00000021292) #23	HPSE2 (ENSKMAG00000021280) #24	hps1 (ENSKMAG00000021266) #25	st3gal7 (ENSKMAG00000021261)	morn4 (ENSKMAG00000021255) #36	ENSKMAG00000021243	ENSKMAG00000021239	slit1a (ENSKMAG00000021147)	ARHGAP19 (ENSKMAG00000021113)	ENSKMAG00000021103	ENSKMAG00000021067	cutc (ENSKMAG00000021035) #18	cox15 (ENSKMAG00000021015) #17	KCNIP2 (ENSKMAG00000020980)	HPS6 (ENSKMAG00000020955)
Turquoise killifish	MODERN SPECIES	1612	PGAM1B (ENSNFUG00015018538)	MARVELD1 (ENSNFUG00015018535) #33	ENSNFUG00015018533	ENSNFUG00015018529	zgc:171482 (ENSNFUG00015018528)	SFRP5 (ENSNFUG00015018523) #31	GOLGA7BB (ENSNFUG00015018520) #30	CRTAC1 (ENSNFUG00015018504) #29	ENSNFUG00015018502	LOXL4 (ENSNFUG00015018470) #27	TTC31 (ENSNFUG00015018453)	pyroxd2 (ENSNFUG00015018415)	SLC25A28 (ENSNFUG00015018407) #20	nkx3.3 (ENSNFUG00015018405)	nkx2.3 (ENSNFUG00015018403) #21	got1 (ENSNFUG00015018375) ##22	CNNM1 (ENSNFUG00015018360) #23	HPSE2 (ENSNFUG00015018350) #24	hps1 (ENSNFUG00015018344) #25	st3gal7 (ENSNFUG00015018341)	morn4 (ENSNFUG00015018340) #36	SLIT1A (ENSNFUG00015015720)	ARHGAP19 (ENSNFUG00015015367)	LCOR (ENSNFUG00015015325)	ABCC2 (ENSNFUG00015005526)	cutc (ENSNFUG00015004545) #18	cox15 (ENSNFUG00015004495) #17	ENSNFUG00015004484	ENSNFUG00015004481	KCNIP2 (ENSNFUG00015004462)	ENSNFUG00015004450
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000164383.b	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383.a	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a	ENSGT00390000001546
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000164383.b	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383.a	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a	ENSGT00390000001546
Poecilia	ANCESTRAL SPECIES	11	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000164383.b	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383.a	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a	ENSGT00390000001546
NAME_6	ANCESTRAL SPECIES	25	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000164383.b	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383.a	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a	ENSGT00390000001546
Amazon molly	MODERN SPECIES	555												pyroxd2 (ENSPFOG00000012391)	slc25a28 (ENSPFOG00000012507) #20	nkx3.3 (ENSPFOG00000020885)	nkx2.3 (ENSPFOG00000012537) #21	got1 (ENSPFOG00000012559) ##22	CNNM1 (ENSPFOG00000012597) #23	HPSE2 (ENSPFOG00000012702) #24	hps1 (ENSPFOG00000012875) #25	st3gal7 (ENSPFOG00000012974)	morn4 (ENSPFOG00000013001) #36	ENSPFOG00000013017	ENSPFOG00000013051	slit1a (ENSPFOG00000013298)	ARHGAP19 (ENSPFOG00000013841)	ENSPFOG00000013897	ENSPFOG00000013938	cox15 (ENSPFOG00000014173) #17	KCNIP2 (ENSPFOG00000014204)	HPS6 (ENSPFOG00000014237)	ENSPFOG00000014261
Sailfin molly	MODERN SPECIES	231								CRTAC1 (ENSPLAG00000007804) #29	ENSPLAG00000007770 #27	ENSPLAG00000007732 #27	zgc:123010 (ENSPLAG00000007711)	pyroxd2 (ENSPLAG00000007698)	slc25a28 (ENSPLAG00000007647) #20	nkx3.3 (ENSPLAG00000007630)	nkx2.3 (ENSPLAG00000000159) #21	got1 (ENSPLAG00000007600) ##22	CNNM1 (ENSPLAG00000007571) #23	HPSE2 (ENSPLAG00000007551) #24	hps1 (ENSPLAG00000007450) #25	st3gal7 (ENSPLAG00000007373)	morn4 (ENSPLAG00000007296) #36	ENSPLAG00000007279	ENSPLAG00000007213	slit1a (ENSPLAG00000006837)	ENSPLAG00000006725	ARHGAP19 (ENSPLAG00000006706)	ENSPLAG00000006694	ENSPLAG00000006652	cutc (ENSPLAG00000006581) #18	cox15 (ENSPLAG00000006546) #17	KCNIP2 (ENSPLAG00000006537)
Guppy	MODERN SPECIES	445	ENSPREG00000019207	ENSPREG00000019215	marveld1 (ENSPREG00000019221) #33	ENSPREG00000019229	zgc:171482 (ENSPREG00000019241)	sfrp5 (ENSPREG00000019287) #31	golga7ba (ENSPREG00000019525) #30	CRTAC1 (ENSPREG00000019532) #29	ENSPREG00000019565 #27	ENSPREG00000019578 #27	zgc:123010 (ENSPREG00000019587)	pyroxd2 (ENSPREG00000019619)	slc25a28 (ENSPREG00000019641) #20	nkx3.3 (ENSPREG00000019662)	nkx2.3 (ENSPREG00000019670) #21	got1 (ENSPREG00000019685) ##22	CNNM1 (ENSPREG00000019717) #23	HPSE2 (ENSPREG00000019796) #24	hps1 (ENSPREG00000019883) #25	st3gal7 (ENSPREG00000019927)	morn4 (ENSPREG00000019999) #36	ENSPREG00000020007	ENSPREG00000020012	ENSPREG00000020025	ENSPREG00000020066	slit1a (ENSPREG00000020253)	ARHGAP19 (ENSPREG00000020307)	ENSPREG00000020339	ENSPREG00000020351	cutc (ENSPREG00000020392) #18	cox15 (ENSPREG00000020424) #17
Platyfish	MODERN SPECIES	14	ENSXMAG00000002647	pgam1a (ENSXMAG00000002644)	marveld1 (ENSXMAG00000020099) #33	ENSXMAG00000020097	zgc:171482 (ENSXMAG00000002641)	sfrp5 (ENSXMAG00000002638) #31	golga7ba (ENSXMAG00000002635) #30	CRTAC1 (ENSXMAG00000002622) #29	ENSXMAG00000029052 #27	ENSXMAG00000024239 #27	zgc:123010 (ENSXMAG00000002598)	pyroxd2 (ENSXMAG00000002582)	slc25a28 (ENSXMAG00000002580) #20	nkx3.3 (ENSXMAG00000023050)	nkx2.3 (ENSXMAG00000027829) #21	got1 (ENSXMAG00000022048) ##22	CNNM1 (ENSXMAG00000002566) #23	HPSE2 (ENSXMAG00000002558) #24	hps1 (ENSXMAG00000002534) #25	st3gal7 (ENSXMAG00000002526)	morn4 (ENSXMAG00000027912) #36	ENSXMAG00000021674	ENSXMAG00000002515	ENSXMAG00000002481	slit1a (ENSXMAG00000002408)	ARHGAP19 (ENSXMAG00000013379)	ENSXMAG00000024016	ENSXMAG00000013392	cutc (ENSXMAG00000013437) #18	cox15 (ENSXMAG00000013440) #17	KCNIP2 (ENSXMAG00000013446)
NAME_4	ANCESTRAL SPECIES	2	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000164383.b	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383.a	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a	ENSGT00390000001546
Mummichog	MODERN SPECIES	2448	ENSFHEG00000002187	ENSFHEG00000002203	pgam1a (ENSFHEG00000002210)	marveld1 (ENSFHEG00000002216) #33	ENSFHEG00000002220	zgc:171482 (ENSFHEG00000002233)	sfrp5 (ENSFHEG00000002237) #31	golga7ba (ENSFHEG00000002244) #30	CRTAC1 (ENSFHEG00000002264) #29	LOXL4 (ENSFHEG00000002295) #27	zgc:123010 (ENSFHEG00000002306)	pyroxd2 (ENSFHEG00000002338)	slc25a28 (ENSFHEG00000002348) #20	nkx3.3 (ENSFHEG00000002355)	nkx2.3 (ENSFHEG00000002367) #21	got1 (ENSFHEG00000002387) ##22	CNNM1 (ENSFHEG00000002420) #23	HPSE2 (ENSFHEG00000002433) #24	hps1 (ENSFHEG00000002446) #25	st3gal7 (ENSFHEG00000002456)	morn4 (ENSFHEG00000002479) #36	ENSFHEG00000000080	ENSFHEG00000002961	slit1a (ENSFHEG00000003102)	ARHGAP19 (ENSFHEG00000003120)	ENSFHEG00000003139	ENSFHEG00000003665	cutc (ENSFHEG00000003722) #18	cox15 (ENSFHEG00000003750) #17	KCNIP2 (ENSFHEG00000003779)	HPS6 (ENSFHEG00000003801)
Sheepshead minnow	MODERN SPECIES	113	ENSCVAG00000013659	pgam1a (ENSCVAG00000013643)	marveld1 (ENSCVAG00000013627) #33	ENSCVAG00000013617	zgc:171482 (ENSCVAG00000013606)	sfrp5 (ENSCVAG00000013587) #31	golga7ba (ENSCVAG00000013553) #30	CRTAC1 (ENSCVAG00000013370) #29	LOXL4 (ENSCVAG00000013336) #27	ENSCVAG00000013303 #27	zgc:123010 (ENSCVAG00000013288)	pyroxd2 (ENSCVAG00000013275)	slc25a28 (ENSCVAG00000013208) #20	nkx3.3 (ENSCVAG00000000340)	nkx2.3 (ENSCVAG00000013182) #21	got1 (ENSCVAG00000013174) ##22	CNNM1 (ENSCVAG00000013139) #23	HPSE2 (ENSCVAG00000013108) #24
Oryzias	ANCESTRAL SPECIES	6	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00970000193827	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT01100000265163	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000162611.b	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383.c	ENSGT00940000164383.d
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00970000193827	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT01100000265163	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000162611.b	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383.c	ENSGT00940000164383.d
Indian medaka	MODERN SPECIES	27	ENSOMEG00000003742	ENSOMEG00000003591	pgam1a (ENSOMEG00000003552)	marveld1 (ENSOMEG00000003543) #33	ENSOMEG00000003536	zgc:171482 (ENSOMEG00000003526)	sfrp5 (ENSOMEG00000003509) #31	golga7ba (ENSOMEG00000003486) #30	CRTAC1 (ENSOMEG00000003461) #29	LOXL4 (ENSOMEG00000003421) #27	zgc:123010 (ENSOMEG00000003408)	pyroxd2 (ENSOMEG00000003379)	slc25a28 (ENSOMEG00000003332) #20	nkx3.3 (ENSOMEG00000003321)	nkx2.3 (ENSOMEG00000003316) #21	got1 (ENSOMEG00000003293) ##22	CNNM1 (ENSOMEG00000003230) #23	HPSE2 (ENSOMEG00000003198) #24	hps1 (ENSOMEG00000003177) #25	st3gal7 (ENSOMEG00000003156)	morn4 (ENSOMEG00000003130) #36	ENSOMEG00000003116	slit1a (ENSOMEG00000003088)	ARHGAP19 (ENSOMEG00000003047)	ENSOMEG00000003032	ENSOMEG00000003010	ENSOMEG00000002962	cutc (ENSOMEG00000002943) #18	cox15 (ENSOMEG00000002912) #17	KCNIP2 (ENSOMEG00000002878)	HPS6 (ENSOMEG00000000730)
Javanese ricefish	MODERN SPECIES	6	ENSOJAG00000012919	ENSOJAG00000012965	pgam1a (ENSOJAG00000012978)	marveld1 (ENSOJAG00000013004) #33	ENSOJAG00000013022	zgc:171482 (ENSOJAG00000013050)	sfrp5 (ENSOJAG00000013058) #31	golga7ba (ENSOJAG00000013072) #30	CRTAC1 (ENSOJAG00000013109) #29	LOXL4 (ENSOJAG00000013309) #27	zgc:123010 (ENSOJAG00000013423)	pyroxd2 (ENSOJAG00000013451)	slc25a28 (ENSOJAG00000013902) #20	nkx3.3 (ENSOJAG00000013915)	nkx2.3 (ENSOJAG00000013921) #21	got1 (ENSOJAG00000013930) ##22	ENSOJAG00000013960	CNNM1 (ENSOJAG00000013995) #23	HPSE2 (ENSOJAG00000014022) #24	hps1 (ENSOJAG00000014107) #25	st3gal7 (ENSOJAG00000014117)	morn4 (ENSOJAG00000014128) #36	ENSOJAG00000014149	ENSOJAG00000014178	ENSOJAG00000014226	slit1a (ENSOJAG00000014244)	ARHGAP19 (ENSOJAG00000014586)	ENSOJAG00000014655	ENSOJAG00000014772	ENSOJAG00000016036	cutc (ENSOJAG00000017954) #18
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT01100000265163	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383.c	ENSGT00940000164383.d	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Chinese medaka	MODERN SPECIES	557	ENSOSIG00000005055	pgam1a (ENSOSIG00000005056)	marveld1 (ENSOSIG00000005057) #33	ENSOSIG00000005059	ENSOSIG00000005060	zgc:171482 (ENSOSIG00000005061)	sfrp5 (ENSOSIG00000005063) #31	golga7ba (ENSOSIG00000005065) #30	CRTAC1 (ENSOSIG00000005087) #29	LOXL4 (ENSOSIG00000006771) #27	zgc:123010 (ENSOSIG00000007189)	pyroxd2 (ENSOSIG00000007194)	slc25a28 (ENSOSIG00000007272) #20	nkx3.3 (ENSOSIG00000007274)	nkx2.3 (ENSOSIG00000007275) #21	got1 (ENSOSIG00000007277) ##22	ENSOSIG00000007278	CNNM1 (ENSOSIG00000007279) #23	HPSE2 (ENSOSIG00000007281) #24	hps1 (ENSOSIG00000007284) #25	st3gal7 (ENSOSIG00000007303)	morn4 (ENSOSIG00000007305) #36	ENSOSIG00000007306	ENSOSIG00000007308	slit1a (ENSOSIG00000007375)	ENSOSIG00000015354
Japanese Medaka HdrR	MODERN SPECIES	6	ENSORLG00000026750	pgam1a (ENSORLG00000007592)	marveld1 (ENSORLG00000027726) #33	ENSORLG00000007598	zgc:171482 (ENSORLG00000007607)	sfrp5 (ENSORLG00000007621) #31	GOLGA7B (ENSORLG00000023120) #30	CRTAC1 (ENSORLG00000007646) #29	ENSORLG00000025258 #27	ENSORLG00000007662 #27	zgc:123010 (ENSORLG00000007675)	pyroxd2 (ENSORLG00000007699)	slc25a28 (ENSORLG00000007710) #20	nkx3.3 (ENSORLG00000007716)	nkx2.3 (ENSORLG00000007722) #21	got1 (ENSORLG00000007741) ##22	ENSORLG00000021808	CNNM1 (ENSORLG00000007759) #23	HPSE2 (ENSORLG00000028285) #24	hps1 (ENSORLG00000007785) #25	st3gal7 (ENSORLG00000007799)	morn4 (ENSORLG00000023611) #36	ENSORLG00000030348	slit1a (ENSORLG00000007918)	ENSORLG00000007936	ENSORLG00000030131	ENSORLG00000027419	ENSORLG00000008249	cutc (ENSORLG00000008290) #18	cox15 (ENSORLG00000008304) #17	KCNIP2 (ENSORLG00000008321)
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000168493	ENSGT00940000162611.b	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005010450	pgam1a (ENSLCRG00005010445)	marveld1 (ENSLCRG00005010443) #33	ENSLCRG00005010442	ENSLCRG00005010441	zgc:171482 (ENSLCRG00005010440)	sfrp5 (ENSLCRG00005010438) #31	golga7ba (ENSLCRG00005010435) #30	CRTAC1 (ENSLCRG00005010413) #29	LOXL4 (ENSLCRG00005010408) #27	zgc:123010 (ENSLCRG00005010405)	pyroxd2 (ENSLCRG00005010402)	slc25a28 (ENSLCRG00005010400) #20	nkx3.3 (ENSLCRG00005010398)	nkx2.3 (ENSLCRG00005010397) #21	got1 (ENSLCRG00005010334) ##22	CNNM1 (ENSLCRG00005010328) #23	HPSE2 (ENSLCRG00005010325) #24	hps1 (ENSLCRG00005010318) #25	st3gal7 (ENSLCRG00005010316)	ANKRD2 (ENSLCRG00005010315)	ENSLCRG00005010313	ENSLCRG00005010312	ENSLCRG00005010311	slit1a (ENSLCRG00005004050)	ARHGAP19 (ENSLCRG00005004020)	ENSLCRG00005004016	ENSLCRG00005000488	cutc (ENSLCRG00005000471) #18	cox15 (ENSLCRG00005000306) #17	KCNIP2 (ENSLCRG00005000223)
European seabass	MODERN SPECIES	1	ZFAND4 (ENSDLAG00005014148)	ENSDLAG00005014064	ENSDLAG00005014016	ENSDLAG00005013994 #33	ENSDLAG00005013980	zgc:171482 (ENSDLAG00005013971)	sfrp5 (ENSDLAG00005013957) #31	GOLGA7B (ENSDLAG00005013948) #30	CRTAC1 (ENSDLAG00005013859) #29	LOXL4 (ENSDLAG00005013817) #27	zgc:123010 (ENSDLAG00005013793)	pyroxd2 (ENSDLAG00005013653)	slc25a28 (ENSDLAG00005013638) #20	ENSDLAG00005031106	nkx2.3 (ENSDLAG00005013631) #21	got1 (ENSDLAG00005013544) ##22	CNNM1 (ENSDLAG00005013527) #23	HPSE2 (ENSDLAG00005013466) #24	hps1 (ENSDLAG00005013448) #25	st3gal7 (ENSDLAG00005013432)	ENSDLAG00005013417	morn4 (ENSDLAG00005033230) #36	ENSDLAG00005033715	ENSDLAG00005028742	ENSDLAG00005010818	ARHGAP19 (ENSDLAG00005010615)	ENSDLAG00005009623	ENSDLAG00005009461 #18	ENSDLAG00005009452 #17	ENSDLAG00005009376	HPS6 (ENSDLAG00005026518)
Gilthead seabream	MODERN SPECIES	6	pgam1a (ENSSAUG00010026018)	marveld1 (ENSSAUG00010026020) #33	ENSSAUG00010026021	ENSSAUG00010026022	ENSSAUG00010026023	zgc:171482 (ENSSAUG00010026024)	sfrp5 (ENSSAUG00010013011) #31	golga7ba (ENSSAUG00010013014) #30	CRTAC1 (ENSSAUG00010013019) #29	LOXL4 (ENSSAUG00010013108) #27	zgc:123010 (ENSSAUG00010013149)	pyroxd2 (ENSSAUG00010013150)	slc25a28 (ENSSAUG00010013405) #20	nkx3.3 (ENSSAUG00010013410)	nkx2.3 (ENSSAUG00010013411) #21	got1 (ENSSAUG00010013416) ##22	CNNM1 (ENSSAUG00010013427) #23	HPSE2 (ENSSAUG00010013432) #24	hps1 (ENSSAUG00010013439) #25	st3gal7 (ENSSAUG00010013443)	ANKRD2 (ENSSAUG00010013445)	ENSSAUG00010013448	ENSSAUG00010013450	ENSSAUG00010013452	ENSSAUG00010013456	slit1a (ENSSAUG00010013534)	ARHGAP19 (ENSSAUG00010020061)	ENSSAUG00010020066	ENSSAUG00010020216	cutc (ENSSAUG00010024734) #18	cox15 (ENSSAUG00010024736) #17
Perciformes	ANCESTRAL SPECIES	17	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00970000193827	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00940000168493	ENSGT00940000162611.b	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Lumpfish	MODERN SPECIES	6	ENSCLMG00005013432	ENSCLMG00005013431	ENSCLMG00005013430	marveld1 (ENSCLMG00005013429) #33	ENSCLMG00005013428	zgc:171482 (ENSCLMG00005013427)	sfrp5 (ENSCLMG00005013426) #31	GOLGA7B (ENSCLMG00005013410) #30	CRTAC1 (ENSCLMG00005013409) #29	LOXL4 (ENSCLMG00005013408) #27	zgc:123010 (ENSCLMG00005013407)	pyroxd2 (ENSCLMG00005013386)	slc25a28 (ENSCLMG00005013383) #20	nkx3.3 (ENSCLMG00005013382)	ENSCLMG00005013381	got1 (ENSCLMG00005013379) ##22	CNNM1 (ENSCLMG00005013377) #23	HPSE2 (ENSCLMG00005013376) #24	hps1 (ENSCLMG00005013374) #25	st3gal7 (ENSCLMG00005013372)	ENSCLMG00005013370	ENSCLMG00005013368	ENSCLMG00005013366	ENSCLMG00005013364	ENSCLMG00005013363	slit1a (ENSCLMG00005011125)	ARHGAP19 (ENSCLMG00005011089)	ENSCLMG00005011087	ENSCLMG00005005991	cutc (ENSCLMG00005005944) #18	cox15 (ENSCLMG00005005940) #17
Stickleback	MODERN SPECIES	6	ENSGACG00000007709	ENSGACG00000007703	pgam1a (ENSGACG00000007692)	marveld1 (ENSGACG00000007690) #33	ENSGACG00000007685	zgc:171482 (ENSGACG00000007680)	sfrp5 (ENSGACG00000007665) #31	golga7ba (ENSGACG00000007656) #30	CRTAC1 (ENSGACG00000007647) #29	LOXL4 (ENSGACG00000007635) #27	zgc:123010 (ENSGACG00000007620)	pyroxd2 (ENSGACG00000007586)	slc25a28 (ENSGACG00000007574) #20	nkx3.3 (ENSGACG00000007573)	nkx2.3 (ENSGACG00000007568) #21	got1 (ENSGACG00000007534) ##22	CNNM1 (ENSGACG00000007529) #23	HPSE2 (ENSGACG00000007523) #24	hps1 (ENSGACG00000007506) #25	st3gal7 (ENSGACG00000007489)	ENSGACG00000007479	ENSGACG00000007469	slit1a (ENSGACG00000007441)	ARHGAP19 (ENSGACG00000007432)	ENSGACG00000007419	cutc (ENSGACG00000007400) #18	cox15 (ENSGACG00000007381) #17	KCNIP2 (ENSGACG00000007366)	HPS6 (ENSGACG00000007363)	ENSGACG00000007331	ldb1a (ENSGACG00000007317)
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00970000193827	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a
Pike perch	MODERN SPECIES	10	ENSSLUG00000021496	ENSSLUG00000021479	ENSSLUG00000021474	marveld1 (ENSSLUG00000021471) #33	ENSSLUG00000021470	zgc:171482 (ENSSLUG00000021467)	sfrp5 (ENSSLUG00000021464) #31	golga7ba (ENSSLUG00000021452) #30	CRTAC1 (ENSSLUG00000021425) #29	LOXL4 (ENSSLUG00000021403) #27	zgc:123010 (ENSSLUG00000021394)	pyroxd2 (ENSSLUG00000021277)	slc25a28 (ENSSLUG00000021260) #20	nkx3.3 (ENSSLUG00000021257)	nkx2.3 (ENSSLUG00000021254) #21	got1 (ENSSLUG00000021245) ##22	CNNM1 (ENSSLUG00000021240) #23	HPSE2 (ENSSLUG00000021232) #24	hps1 (ENSSLUG00000021216) #25	st3gal7 (ENSSLUG00000021200)	ENSSLUG00000021193	morn4 (ENSSLUG00000021185) #36	ENSSLUG00000021182	ENSSLUG00000021178	slit1a (ENSSLUG00000021011)	ARHGAP19 (ENSSLUG00000020919)	ENSSLUG00000020904	ENSSLUG00000009434	cutc (ENSSLUG00000008760) #18	cox15 (ENSSLUG00000008671) #17	KCNIP2 (ENSSLUG00000008653)
Channel bull blenny	MODERN SPECIES	6	ENSCGOG00000015373	ENSCGOG00000015371	pgam1a (ENSCGOG00000015347)	marveld1 (ENSCGOG00000015344) #33	ENSCGOG00000015336	zgc:171482 (ENSCGOG00000015332)	sfrp5 (ENSCGOG00000015328) #31	golga7ba (ENSCGOG00000015325) #30	CRTAC1 (ENSCGOG00000015313) #29	LOXL4 (ENSCGOG00000015110) #27	zgc:123010 (ENSCGOG00000015095)	pyroxd2 (ENSCGOG00000014876)	slc25a28 (ENSCGOG00000014869) #20	nkx3.3 (ENSCGOG00000014866)	nkx2.3 (ENSCGOG00000014865) #21	got1 (ENSCGOG00000014821) ##22	CNNM1 (ENSCGOG00000014819) #23	HPSE2 (ENSCGOG00000014794) #24	hps1 (ENSCGOG00000014792) #25	st3gal7 (ENSCGOG00000014779)	ANKRD2 (ENSCGOG00000014778)	ENSCGOG00000014776	ENSCGOG00000014773	ENSCGOG00000014770	ENSCGOG00000014769	slit1a (ENSCGOG00000012624)	ARHGAP19 (ENSCGOG00000012563)	ENSCGOG00000012557	ENSCGOG00000012388	cutc (ENSCGOG00000012293) #18	cox15 (ENSCGOG00000012179) #17
Ballan wrasse	MODERN SPECIES	380							zgc:171482 (ENSLBEG00000023823)	sfrp5 (ENSLBEG00000023832) #31	golga7ba (ENSLBEG00000023858) #30	CRTAC1 (ENSLBEG00000023893) #29	ENSLBEG00000023931 #27	ENSLBEG00000023958 #27	zgc:123010 (ENSLBEG00000023984)	pyroxd2 (ENSLBEG00000024045)	slc25a28 (ENSLBEG00000024105) #20	got1 (ENSLBEG00000024148) ##22	nkx3.3 (ENSLBEG00000024201)	nkx2.3 (ENSLBEG00000024213) #21	ENSLBEG00000024221	CNNM1 (ENSLBEG00000024249) #23	HPSE2 (ENSLBEG00000024286) #24	hps1 (ENSLBEG00000024384) #25	st3gal7 (ENSLBEG00000024440)	ANKRD2 (ENSLBEG00000024460)	morn4 (ENSLBEG00000024479) #36	ENSLBEG00000024501	slit1a (ENSLBEG00000024535)
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00730000111173.g #36	ENSGT00940000168493	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.a
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	9	zfand4 (ENSTNIG00000008675)	ENSTNIG00000008676	ENSTNIG00000008677	pgam1a (ENSTNIG00000008678)	marveld1 (ENSTNIG00000000905) #33	zgc:171482 (ENSTNIG00000008679)	ENSTNIG00000008680	sfrp5 (ENSTNIG00000008681) #31	golga7ba (ENSTNIG00000008682) #30	CRTAC1 (ENSTNIG00000008683) #29	LOXL4 (ENSTNIG00000008684) #27	zgc:123010 (ENSTNIG00000001303)	pyroxd2 (ENSTNIG00000008685)	slc25a28 (ENSTNIG00000008686) #20	nkx2.3 (ENSTNIG00000005826) #21	got1 (ENSTNIG00000005827) ##22	got1 (ENSTNIG00000002758) ##22	CNNM1 (ENSTNIG00000002757) #23	HPSE2 (ENSTNIG00000002756) #24	hps1 (ENSTNIG00000002755) #25	st3gal7 (ENSTNIG00000002754)	morn4 (ENSTNIG00000002753) #36	slit1a (ENSTNIG00000005554)	ARHGAP19 (ENSTNIG00000016511)	ENSTNIG00000016512	cutc (ENSTNIG00000016513) #18	cox15 (ENSTNIG00000016514) #17	KCNIP2 (ENSTNIG00000016515)	ENSTNIG00000001347	ENSTNIG00000016516	oga (ENSTNIG00000016517)
Tetraodon	MODERN SPECIES	9	ENSTNIG00000008676	ENSTNIG00000008677	pgam1a (ENSTNIG00000008678)	marveld1 (ENSTNIG00000000905) #33	zgc:171482 (ENSTNIG00000008679)	ENSTNIG00000008680	sfrp5 (ENSTNIG00000008681) #31	golga7ba (ENSTNIG00000008682) #30	CRTAC1 (ENSTNIG00000008683) #29	LOXL4 (ENSTNIG00000008684) #27	zgc:123010 (ENSTNIG00000001303)	pyroxd2 (ENSTNIG00000008685)	slc25a28 (ENSTNIG00000008686) #20	nkx2.3 (ENSTNIG00000005826) #21	got1 (ENSTNIG00000005827) ##22	got1 (ENSTNIG00000002758) ##22	CNNM1 (ENSTNIG00000002757) #23	HPSE2 (ENSTNIG00000002756) #24	hps1 (ENSTNIG00000002755) #25	st3gal7 (ENSTNIG00000002754)	morn4 (ENSTNIG00000002753) #36	slit1a (ENSTNIG00000005554)	ARHGAP19 (ENSTNIG00000016511)	ENSTNIG00000016512	cutc (ENSTNIG00000016513) #18	cox15 (ENSTNIG00000016514) #17	KCNIP2 (ENSTNIG00000016515)	ENSTNIG00000001347	ENSTNIG00000016516	oga (ENSTNIG00000016517)	npm3 (ENSTNIG00000016518)
Fugu	MODERN SPECIES	16	zfand4 (ENSTRUG00000004042)	ENSTRUG00000004311	ENSTRUG00000005455	pgam1a (ENSTRUG00000022599)	marveld1 (ENSTRUG00000005698) #33	ENSTRUG00000022628	ENSTRUG00000032921	zgc:171482 (ENSTRUG00000005705)	sfrp5 (ENSTRUG00000021491) #31	crtac1 (ENSTRUG00000006008) #29	LOXL4 (ENSTRUG00000006359) #27	pyroxd2 (ENSTRUG00000006805)	slc25a28 (ENSTRUG00000007096) #20	nkx3.3 (ENSTRUG00000020172)	nkx2.3 (ENSTRUG00000024381) #21	got1 (ENSTRUG00000007276) ##22	cnnm1 (ENSTRUG00000007603) #23	HPSE2 (ENSTRUG00000007806) #24	hps1 (ENSTRUG00000008073) #25	ENSTRUG00000030291	ENSTRUG00000032843	ENSTRUG00000008704	slit1a (ENSTRUG00000008791)	ARHGAP19 (ENSTRUG00000009178)	ENSTRUG00000024980	abcc2 (ENSTRUG00000009329)	cutc (ENSTRUG00000010646) #18	cox15 (ENSTRUG00000024846) #17	KCNIP2 (ENSTRUG00000025958)	ENSTRUG00000028008	HPS6 (ENSTRUG00000010666)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00970000193827	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000168493	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000000703	ENSMAMG00000000839	ENSMAMG00000000913	ENSMAMG00000000923 #33	ENSMAMG00000001014	zgc:171482 (ENSMAMG00000001031)	sfrp5 (ENSMAMG00000001048) #31	GOLGA7B (ENSMAMG00000024613) #30	CRTAC1 (ENSMAMG00000001076) #29	LOXL4 (ENSMAMG00000001127) #27	zgc:123010 (ENSMAMG00000001145)	pyroxd2 (ENSMAMG00000001200)	slc25a28 (ENSMAMG00000001280) #20	nkx3.3 (ENSMAMG00000001296)	nkx2.3 (ENSMAMG00000001312) #21	got1 (ENSMAMG00000001359) ##22	CNNM1 (ENSMAMG00000001389) #23	HPSE2 (ENSMAMG00000001454) #24	hps1 (ENSMAMG00000001615) #25	st3gal7 (ENSMAMG00000001658)	ENSMAMG00000001686	morn4 (ENSMAMG00000001711) #36	ENSMAMG00000027836	ENSMAMG00000028573	ENSMAMG00000001729	ENSMAMG00000001778	ARHGAP19 (ENSMAMG00000001865)	ENSMAMG00000001887	ENSMAMG00000001950	ENSMAMG00000002346 #18	ENSMAMG00000002386 #17
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00970000193827	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00940000168493	ENSGT00940000162611.b	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Climbing perch	MODERN SPECIES	6	ENSATEG00000001472	ENSATEG00000001446	ENSATEG00000001419 #33	ENSATEG00000001393	zgc:171482 (ENSATEG00000001371)	ENSATEG00000025382	sfrp5 (ENSATEG00000001362) #31	GOLGA7B (ENSATEG00000027423) #30	CRTAC1 (ENSATEG00000001284) #29	LOXL4 (ENSATEG00000001230) #27	zgc:123010 (ENSATEG00000001220)	pyroxd2 (ENSATEG00000001168)	slc25a28 (ENSATEG00000001143) #20	nkx3.3 (ENSATEG00000028419)	nkx2.3 (ENSATEG00000001133) #21	got1 (ENSATEG00000001085) ##22	CNNM1 (ENSATEG00000000944) #23	HPSE2 (ENSATEG00000000880) #24	hps1 (ENSATEG00000000728) #25	st3gal7 (ENSATEG00000000723)	ENSATEG00000000577	ENSATEG00000029114	ENSATEG00000000532	ENSATEG00000000527	ENSATEG00000000357	ARHGAP19 (ENSATEG00000000347)	ENSATEG00000000291	ENSATEG00000000283	ENSATEG00000000242 #18	ENSATEG00000000233 #17	ENSATEG00000000183
Siamese fighting fish	MODERN SPECIES	6	sfrp5 (ENSBSLG00000022037) #31	golga7ba (ENSBSLG00000022031) #30	CRTAC1 (ENSBSLG00000021687) #29	LOXL4 (ENSBSLG00000021670) #27	pyroxd2 (ENSBSLG00000021658)	slc25a28 (ENSBSLG00000021642) #20	nkx3.3 (ENSBSLG00000021640)	nkx2.3 (ENSBSLG00000021639) #21	ENSBSLG00000021637	zgc:123010 (ENSBSLG00000021603)	pyroxd2 (ENSBSLG00000021593)	slc25a28 (ENSBSLG00000021560) #20	nkx3.3 (ENSBSLG00000021543)	nkx2.3 (ENSBSLG00000021528) #21	ENSBSLG00000021518	got1 (ENSBSLG00000021411) ##22	CNNM1 (ENSBSLG00000021316) #23	HPSE2 (ENSBSLG00000021110) #24	hps1 (ENSBSLG00000020826) #25	st3gal7 (ENSBSLG00000020817)	ANKRD2 (ENSBSLG00000020811)	ENSBSLG00000020808	ENSBSLG00000020803	ENSBSLG00000020797	ENSBSLG00000020796	slit1a (ENSBSLG00000020170)	ARHGAP19 (ENSBSLG00000020038)	ENSBSLG00000020035	ENSBSLG00000017804	cutc (ENSBSLG00000017567) #18	cox15 (ENSBSLG00000017325) #17
Carangaria	ANCESTRAL SPECIES	19	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18
Carangaria_A	ANCESTRAL SPECIES	25	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A
Seriola	ANCESTRAL SPECIES	17	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A
Yellowtail amberjack	MODERN SPECIES	2713	ENSSLDG00000019544	pgam1a (ENSSLDG00000019539)	marveld1 (ENSSLDG00000019528) #33	ENSSLDG00000019520	zgc:171482 (ENSSLDG00000019510)	sfrp5 (ENSSLDG00000019498) #31	golga7ba (ENSSLDG00000019486) #30	CRTAC1 (ENSSLDG00000019460) #29	ENSSLDG00000019436 #27	ENSSLDG00000019427 #27	zgc:123010 (ENSSLDG00000019386)	pyroxd2 (ENSSLDG00000019341)	slc25a28 (ENSSLDG00000019324) #20	nkx3.3 (ENSSLDG00000019317)	nkx2.3 (ENSSLDG00000019312) #21	got1 (ENSSLDG00000019291) ##22	CNNM1 (ENSSLDG00000019278) #23	HPSE2 (ENSSLDG00000019240) #24	hps1 (ENSSLDG00000019199) #25	st3gal7 (ENSSLDG00000019183)	ENSSLDG00000019138	morn4 (ENSSLDG00000019122) #36	ENSSLDG00000019112
Greater amberjack	MODERN SPECIES	147	ENSSDUG00000008825	pgam1a (ENSSDUG00000008810)	marveld1 (ENSSDUG00000008794) #33	ENSSDUG00000008786	zgc:171482 (ENSSDUG00000008773)	sfrp5 (ENSSDUG00000008758) #31	golga7ba (ENSSDUG00000008742) #30	CRTAC1 (ENSSDUG00000008706) #29	ENSSDUG00000008685 #27	ENSSDUG00000008672 #27	zgc:123010 (ENSSDUG00000008651)	pyroxd2 (ENSSDUG00000008623)	slc25a28 (ENSSDUG00000008608) #20	nkx3.3 (ENSSDUG00000008602)	nkx2.3 (ENSSDUG00000008599) #21	got1 (ENSSDUG00000008579) ##22	CNNM1 (ENSSDUG00000008497) #23	HPSE2 (ENSSDUG00000008325) #24	hps1 (ENSSDUG00000008227) #25	st3gal7 (ENSSDUG00000008206)	ENSSDUG00000008145	morn4 (ENSSDUG00000008122) #36	ENSSDUG00000008112	ENSSDUG00000008108
Barramundi perch	MODERN SPECIES	14	ENSLCAG00010004244	ENSLCAG00010004237	pgam1a (ENSLCAG00010004235)	marveld1 (ENSLCAG00010004234) #33	ENSLCAG00010004232	zgc:171482 (ENSLCAG00010004228)	sfrp5 (ENSLCAG00010004224) #31	golga7ba (ENSLCAG00010004221) #30	CRTAC1 (ENSLCAG00010004209) #29	LOXL4 (ENSLCAG00010004189) #27	zgc:123010 (ENSLCAG00010004184)	pyroxd2 (ENSLCAG00010004145)	slc25a28 (ENSLCAG00010004135) #20	nkx3.3 (ENSLCAG00010004133)	nkx2.3 (ENSLCAG00010004130) #21	got1 (ENSLCAG00010004125) ##22	CNNM1 (ENSLCAG00010004120) #23	HPSE2 (ENSLCAG00010004113) #24	hps1 (ENSLCAG00010004110) #25	st3gal7 (ENSLCAG00010004103)	ENSLCAG00010004098	morn4 (ENSLCAG00010004090) #36	ENSLCAG00010004086	ENSLCAG00010004083	map7d1b (ENSLCAG00010004081)	ENSLCAG00010004074	LSM10 (ENSLCAG00010004071)	oscp1a (ENSLCAG00010004068)	ENSLCAG00010004066	zc3h12ab (ENSLCAG00010004058)	smim13 (ENSLCAG00010004056)
Pleuronectoidei	ANCESTRAL SPECIES	25	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.d #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000177979	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17
Tongue sole	MODERN SPECIES	3	ENSCSEG00000006553	ENSCSEG00000006534	PGAM1 (ENSCSEG00000006519)	marveld1 (ENSCSEG00000006515) #33	ENSCSEG00000006514	zgc:171482 (ENSCSEG00000006509)	sfrp5 (ENSCSEG00000006506) #31	golga7ba (ENSCSEG00000006502) #30	CRTAC1 (ENSCSEG00000006493) #29	LOXL4 (ENSCSEG00000006478) #27	zgc:123010 (ENSCSEG00000006468)	pyroxd2 (ENSCSEG00000006444)	slc25a28 (ENSCSEG00000006441) #20	nkx3.3 (ENSCSEG00000006437)	nkx2.3 (ENSCSEG00000006432) #21	got1 (ENSCSEG00000006415) ##22	CNNM1 (ENSCSEG00000006403) #23	HPSE2 (ENSCSEG00000006339) #24	hps1 (ENSCSEG00000006320) #25	st3gal7 (ENSCSEG00000006314)	ANKRD2 (ENSCSEG00000006304)	morn4 (ENSCSEG00000006299) #36	ENSCSEG00000006294	gtf2a1l (ENSCSEG00000006290)	ENSCSEG00000006282	ENSCSEG00000006279	ENSCSEG00000006277	nrxn1b (ENSCSEG00000006156)	erlec1 (ENSCSEG00000006132)	GPR75 (ENSCSEG00000006128)	PSME4 (ENSCSEG00000006059)
Turbot	MODERN SPECIES	6	ENSSMAG00000002635	ENSSMAG00000024696	ENSSMAG00000002692	ENSSMAG00000002697 #33	ENSSMAG00000002708	zgc:171482 (ENSSMAG00000002715)	sfrp5 (ENSSMAG00000002734) #31	GOLGA7B (ENSSMAG00000030452) #30	CRTAC1 (ENSSMAG00000002780) #29	LOXL4 (ENSSMAG00000002844) #27	zgc:123010 (ENSSMAG00000002904)	pyroxd2 (ENSSMAG00000002980)	slc25a28 (ENSSMAG00000003030) #20	nkx3.3 (ENSSMAG00000027149)	nkx2.3 (ENSSMAG00000003048) #21	got1 (ENSSMAG00000003052) ##22	ENSSMAG00000003068	CNNM1 (ENSSMAG00000003081) #23	HPSE2 (ENSSMAG00000003124) #24	hps1 (ENSSMAG00000003230) #25	st3gal7 (ENSSMAG00000003246)	ENSSMAG00000003260	morn4 (ENSSMAG00000003311) #36	ENSSMAG00000003337	ENSSMAG00000003340	ENSSMAG00000003352	ARHGAP19 (ENSSMAG00000003538)	ENSSMAG00000003547	ENSSMAG00000003582 #18	ENSSMAG00000003608 #17	ENSSMAG00000003627
Pinecone sodierfish	MODERN SPECIES	6	ENSMMDG00005008337	ENSMMDG00005008342	pi4k2a (ENSMMDG00005008344) #35	marveld1 (ENSMMDG00005008346) #33	ENSMMDG00005008349	zgc:171482 (ENSMMDG00005008352)	sfrp5 (ENSMMDG00005008355) #31	golga7ba (ENSMMDG00005008357) #30	CRTAC1 (ENSMMDG00005008370) #29	LOXL4 (ENSMMDG00005008634) #27	zgc:123010 (ENSMMDG00005009376)	pyroxd2 (ENSMMDG00005009398)	slc25a28 (ENSMMDG00005009667) #20	nkx3.3 (ENSMMDG00005009687)	nkx2.3 (ENSMMDG00005009689) #21	got1 (ENSMMDG00005009694) ##22	CNNM1 (ENSMMDG00005009709) #23	HPSE2 (ENSMMDG00005009712) #24	hps1 (ENSMMDG00005009716) #25	st3gal7 (ENSMMDG00005009720)	ENSMMDG00005009745	morn4 (ENSMMDG00005009747) #36	ENSMMDG00005009749	ENSMMDG00005009752	ENSMMDG00005009753	slit1a (ENSMMDG00005009763)	ARHGAP19 (ENSMMDG00005009773)	ENSMMDG00005009779	ENSMMDG00005009844	cutc (ENSMMDG00005011130) #18	cox15 (ENSMMDG00005011167) #17
Cod	MODERN SPECIES	6								ENSGMOG00000030430	zgc:171482 (ENSGMOG00000010508)	ENSGMOG00000030895 #27	zgc:123010 (ENSGMOG00000018473)	pyroxd2 (ENSGMOG00000018441)	slc25a28 (ENSGMOG00000011952) #20	nkx3.3 (ENSGMOG00000031636)	nkx2.3 (ENSGMOG00000035037) #21	got1 (ENSGMOG00000018387) ##22	ENSGMOG00000025126 #23	HPSE2 (ENSGMOG00000018343) #24	hps1 (ENSGMOG00000018315) #25	st3gal7 (ENSGMOG00000026694)	ENSGMOG00000022190	morn4 (ENSGMOG00000033836) #36	ENSGMOG00000027846	ENSGMOG00000027692	ENSGMOG00000018219	ENSGMOG00000018205	ENSGMOG00000025467	ENSGMOG00000018157	ENSGMOG00000018146 #18	ENSGMOG00000018132 #17	ENSGMOG00000018120
Protacanthopterygii	ANCESTRAL SPECIES	9	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a.w #27	ENSGT00940000157042.c.a.x #27	ENSGT00390000013726.c #29	ENSGT00390000000134.a.d.b.a.b.a #30	ENSGT00940000160608 #31	ENSGT00940000165757.c.a	ENSGT00940000165757.d.m.b	ENSGT00510000049375 #33	ENSGT00730000112219	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000157049.c #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a.tb #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT00940000153408.A	ENSGT00950000183045.A.a.b	ENSGT00940000157134	ENSGT00390000009790	ENSGT00940000155064
Northern pike	MODERN SPECIES	5	LOXL4 (ENSELUG00000021966) #27	CRTAC1 (ENSELUG00000021908) #29	golga7ba (ENSELUG00000021864) #30	sfrp5 (ENSELUG00000021837) #31	zgc:171482 (ENSELUG00000021817)	ENSELUG00000030584	ENSELUG00000021778	marveld1 (ENSELUG00000021766) #33	ENSELUG00000021760	pi4k2a (ENSELUG00000021744) #35	ENSELUG00000021705	ENSELUG00000021674	slc25a28 (ENSELUG00000021579) #20	nkx3.3 (ENSELUG00000021562)	nkx2.3 (ENSELUG00000021555) #21	got1 (ENSELUG00000021545) ##22	CNNM1 (ENSELUG00000021501) #23	HPSE2 (ENSELUG00000021468) #24	hps1 (ENSELUG00000021455) #25	morn4 (ENSELUG00000021411) #36	ENSELUG00000021368	slit1a (ENSELUG00000021342)	ARHGAP19 (ENSELUG00000021067)	XPO5 (ENSELUG00000021008)	khdrbs2 (ENSELUG00000020898)	prim2 (ENSELUG00000020852)	rab23 (ENSELUG00000020788)	bag2 (ENSELUG00000031955)	ENSELUG00000020757	ENSELUG00000031724	ENSELUG00000028331
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.a.c ##22
Huchen	MODERN SPECIES	8097																ENSHHUG00000000995 ##22	ENSHHUG00000000980 ##22
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	235	ENSGT00940000161036.B.a.c	ENSGT00940000157042.c.a.x #27	ENSGT00390000013726.c #29	ENSGT00390000000134.a.d.b.a.b.a #30	ENSGT00940000160608.e #31	ENSGT00940000165757.c.a	ENSGT00940000165757.d.m.b	ENSGT00510000049375.h #33	ENSGT00730000112219	ENSGT00390000010434.b.d.a #35	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00530000064017.a.e	ENSGT00940000157049.c.a #20	ENSGT00940000165452.a.g	ENSGT00940000157556.a.b.e #21	ENSGT00950000183082.b.b.a.a.d.a ##22	ENSGT00940000157525.b.c #23	ENSGT00390000004874.a.a.tb #24	ENSGT00390000015298 #25	ENSGT00940000163723.A.f.a	ENSGT00510000049375.g #33	ENSGT00390000010434.b.d.b #35	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00530000064017.a.f	ENSGT00940000157049.c.b.b #20	ENSGT00940000165452.a.h	ENSGT00940000157556.a.b.f #21	ENSGT00950000183082.b.b.a.a.d.b ##22	ENSGT00940000157525.b.d #23	ENSGT00390000004874.a.a.ub #24	ENSGT00940000165889
Huchen	MODERN SPECIES	1252													ENSHHUG00000023326	nkx3.3 (ENSHHUG00000023327)	nkx2.3 (ENSHHUG00000023329) #21	got1 (ENSHHUG00000023333) ##22	ENSHHUG00000023347	CNNM1 (ENSHHUG00000023364) #23	HPSE2 (ENSHHUG00000023373) #24	hps1 (ENSHHUG00000023384) #25	morn4 (ENSHHUG00000023402) #36	ENSHHUG00000023406	slit1a (ENSHHUG00000023415)
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00940000161036.B.a.c	ENSGT00940000157042.c.a.x #27	ENSGT00390000013726.c #29	ENSGT00390000000134.a.d.b.a.b.a #30	ENSGT00940000160608.e #31	ENSGT00940000165757.c.a.a	ENSGT00940000165757.d.m.b	ENSGT00510000049375.h #33	ENSGT00730000112219	ENSGT00390000010434.b.d.a #35	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00530000064017.a.e	ENSGT00940000157049.c.a #20	ENSGT00940000165452.a.g	ENSGT00940000157556.a.b.e #21	ENSGT00950000183082.b.b.a.a.d.a ##22	ENSGT00940000157525.b.c #23	ENSGT00390000004874.a.a.tb #24	ENSGT00390000015298 #25	ENSGT00940000162611.a.a.b.a	ENSGT00940000154965.A.b	ENSGT00940000157322.b.a.e.a.b	ENSGT00940000157331.b.b	ENSGT00940000153408.A.ab.b	ENSGT00950000183045.A.a.b	ENSGT00940000157134.g	ENSGT00390000009790.c	ENSGT00940000155064.m	ENSGT00390000017590.c	ENSGT00940000166866.c	ENSGT00940000155008.C.pc
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00940000161036.B.a.c	ENSGT00940000157042.c.a.x #27	ENSGT00390000013726.c #29	ENSGT00390000000134.a.d.b.a.b.a #30	ENSGT00940000160608.e #31	ENSGT00940000165757.c.a.a	ENSGT00940000165757.d.m.b	ENSGT00510000049375.h #33	ENSGT00730000112219	ENSGT00390000010434.b.d.a #35	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00530000064017.a.e	ENSGT00940000157049.c.a #20	ENSGT00940000165452.a.g	ENSGT00940000157556.a.b.e #21	ENSGT00950000183082.b.b.a.a.d.a ##22	ENSGT00940000157525.b.c #23	ENSGT00390000004874.a.a.tb #24	ENSGT00390000015298 #25	ENSGT00940000162611.a.a.b.a	ENSGT00940000154965.A.b	ENSGT00940000157322.b.a.e.a.a.a	ENSGT00940000157331.b.b	ENSGT00940000153408.A.ab.b	ENSGT00950000183045.A.a.b	ENSGT00940000157134.g	ENSGT00390000009790.c	ENSGT00940000155064.m	ENSGT00390000017590.c	ENSGT00940000166866.c	ENSGT00940000155008.C.pc
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00940000164861	ENSGT00940000161036.B.a.c	ENSGT00940000157042.c.a.x #27	ENSGT00390000013726.c #29	ENSGT00390000000134.a.d.b.a.b.a #30	ENSGT00940000160608.e #31	ENSGT00940000165757.c.a.a	ENSGT00940000165757.d.m.b	ENSGT00510000049375.h #33	ENSGT00390000010434.b.d.a #35	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00530000064017.a.e	ENSGT00940000157049.c.a #20	ENSGT00940000165452.a.g	ENSGT00940000157556.a.b.e #21	ENSGT00950000183082.b.b.a.a.d.a ##22	ENSGT00940000157525.b.c #23	ENSGT00390000004874.a.a.tb #24	ENSGT00390000015298 #25	ENSGT00940000162611.a.a.b.a	ENSGT00940000154965.A.b	ENSGT00940000157322.b.a.e.a.a.a	ENSGT00940000157331.b.b	ENSGT00940000153408.A.ab.b	ENSGT00950000183045.A.a.b	ENSGT00940000157134.g	ENSGT00390000009790.c	ENSGT00940000155064.m	ENSGT00390000017590.c	ENSGT00940000166866.c	ENSGT00940000155008.C.pc
Chinook salmon	MODERN SPECIES		pyroxd2 (ENSOTSG00005034694)	zgc:123010 (ENSOTSG00005034718)	LOXL4 (ENSOTSG00005034720) #27	CRTAC1 (ENSOTSG00005034724) #29	golga7ba (ENSOTSG00005034732) #30	sfrp5 (ENSOTSG00005034735) #31	zgc:171482 (ENSOTSG00005034736)	ENSOTSG00005034738	marveld1 (ENSOTSG00005034739) #33	pi4k2a (ENSOTSG00005034743) #35	ENSOTSG00005034757	ENSOTSG00005034758	slc25a28 (ENSOTSG00005034771) #20	nkx3.3 (ENSOTSG00005034773)	nkx2.3 (ENSOTSG00005034778) #21	got1 (ENSOTSG00005034780) ##22	CNNM1 (ENSOTSG00005034781) #23	HPSE2 (ENSOTSG00005034782) #24	hps1 (ENSOTSG00005005581) #25	ENSOTSG00005005582	ENSOTSG00005005583	ENSOTSG00005005584	ARHGAP19 (ENSOTSG00005005585)	XPO5 (ENSOTSG00005005617)	ENSOTSG00005007655	khdrbs2 (ENSOTSG00005007669)	prim2 (ENSOTSG00005007670)	rab23 (ENSOTSG00005007673)	bag2 (ENSOTSG00005007675)	ENSOTSG00005007677	DST (ENSOTSG00005007761)
Rainbow trout	MODERN SPECIES	15	GOLGA7B (ENSOMYG00000051786) #30	ENSOMYG00000069969	ENSOMYG00000062644	sfrp5 (ENSOMYG00000021969) #31	zgc:171482 (ENSOMYG00000021987)	ENSOMYG00000050779	ENSOMYG00000062940	marveld1 (ENSOMYG00000021995) #33	ENSOMYG00000055216	ENSOMYG00000022064 #35	ENSOMYG00000022339	ENSOMYG00000022351	slc25a28 (ENSOMYG00000022375) #20	nkx3.3 (ENSOMYG00000022398)	nkx2.3 (ENSOMYG00000022417) #21	got1 (ENSOMYG00000022428) ##22	CNNM1 (ENSOMYG00000022440) #23	HPSE2 (ENSOMYG00000022482) #24	hps1 (ENSOMYG00000022522) #25	ENSOMYG00000022546	ENSOMYG00000022554	ENSOMYG00000024345	ENSOMYG00000054411	ARHGAP19 (ENSOMYG00000034469)	ENSOMYG00000034753	ENSOMYG00000056476	KHDRBS2 (ENSOMYG00000035964)	ENSOMYG00000063102	prim2 (ENSOMYG00000036018)	ENSOMYG00000051765	rab23 (ENSOMYG00000036101)
Salmo	ANCESTRAL SPECIES	23	ENSGT00940000164861	ENSGT00940000161036.B.a.c	ENSGT00940000157042.c.a.x #27	ENSGT00390000013726.c #29	ENSGT00390000000134.a.d.b.a.b.a #30	ENSGT00940000160608.e #31	ENSGT00940000165757.c.a.a	ENSGT00940000165757.d.m.b	ENSGT00510000049375.h #33	ENSGT00390000010434.b.d.a #35	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00530000064017.a.e	ENSGT00940000157049.c.a #20	ENSGT00940000165452.a.g	ENSGT00940000157556.a.b.e #21	ENSGT00950000183082.b.b.a.a.d.a ##22	ENSGT00940000157525.b.c #23	ENSGT00390000004874.a.a.tb #24	ENSGT00390000015298 #25	ENSGT00940000162611.a.a.b.a	ENSGT00940000154965.A.b	ENSGT00940000157322.b.a.e.a.b	ENSGT00940000157331.b.b	ENSGT00940000153408.A.ab.a.a	ENSGT00950000183045.A.a.b	ENSGT00940000157134.g	ENSGT00390000009790.c	ENSGT00940000155064.m	ENSGT00390000017590.c	ENSGT00940000166866.c	ENSGT00940000155008.C.pc
River trout	MODERN SPECIES	9	pyroxd2 (ENSSTUG00000029431)	zgc:123010 (ENSSTUG00000029719)	LOXL4 (ENSSTUG00000029733) #27	CRTAC1 (ENSSTUG00000029788) #29	golga7ba (ENSSTUG00000030070) #30	sfrp5 (ENSSTUG00000030084) #31	zgc:171482 (ENSSTUG00000030120)	ENSSTUG00000030137	marveld1 (ENSSTUG00000030144) #33	pi4k2a (ENSSTUG00000030160) #35	ENSSTUG00000030263	ENSSTUG00000030279	slc25a28 (ENSSTUG00000030300) #20	nkx3.3 (ENSSTUG00000030314)	nkx2.3 (ENSSTUG00000030317) #21	got1 (ENSSTUG00000030324) ##22	CNNM1 (ENSSTUG00000030339) #23	HPSE2 (ENSSTUG00000033415) #24	hps1 (ENSSTUG00000033428) #25	ENSSTUG00000033539	ENSSTUG00000033530	slit1a (ENSSTUG00000033922)	ARHGAP19 (ENSSTUG00000045255)	XPO5 (ENSSTUG00000045278)	ENSSTUG00000045608	khdrbs2 (ENSSTUG00000045622)	prim2 (ENSSTUG00000045651)	rab23 (ENSSTUG00000045730)	ENSSTUG00000045744	bag2 (ENSSTUG00000045751)	ENSSTUG00000045759
Atlantic salmon	MODERN SPECIES		LOXL4 (ENSSSAG00000000522) #27	crtac1 (ENSSSAG00000000725) #29	ENSSSAG00000113491	ENSSSAG00000116855	ENSSSAG00000000967 #30	ENSSSAG00000085188	sfrp5 (ENSSSAG00000122261) #31	zgc:171482 (ENSSSAG00000000977)	ENSSSAG00000120201	ENSSSAG00000075457 #35	pgam1 (ENSSSAG00000001006)	ENSSSAG00000001009	slc25a28 (ENSSSAG00000096756) #20	nkx3.3 (ENSSSAG00000001020)	nkx2-3 (ENSSSAG00000001022) #21	got1 (ENSSSAG00000075564) ##22	CNNM1 (ENSSSAG00000075572) #23	HPSE2 (ENSSSAG00000114675) #24	hps1 (ENSSSAG00000001071) #25	ENSSSAG00000093017	ENSSSAG00000113366	ENSSSAG00000088082	ENSSSAG00000001168	ARHGAP19 (ENSSSAG00000001541)	ENSSSAG00000077679	ENSSSAG00000001853	KHDRBS2 (ENSSSAG00000001861)	prim2 (ENSSSAG00000001875)	rab23 (ENSSSAG00000092471)	bag2 (ENSSSAG00000001893)	ENSSSAG00000001900
Salmoninae	ANCESTRAL SPECIES	235	ENSGT00940000157049.c.a #20	ENSGT00940000165452.a.g	ENSGT00940000157556.a.b.e #21	ENSGT00950000183082.b.b.a.a.d.a ##22	ENSGT00940000157525.b.c #23	ENSGT00390000004874.a.a.tb #24	ENSGT00390000015298 #25	ENSGT00940000163723.A.f.a	ENSGT00510000049375.g #33	ENSGT00390000010434.b.d.b #35	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00530000064017.a.f	ENSGT00940000157049.c.b.b #20	ENSGT00940000165452.a.h	ENSGT00940000157556.a.b.f #21	ENSGT00950000183082.b.b.a.a.d.b ##22	ENSGT00940000157525.b.d #23	ENSGT00390000004874.a.a.ub #24	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b.b	ENSGT00940000154965.A.a	ENSGT00940000157322.b.a.e.b	ENSGT00940000162611.a.a.b.a	ENSGT00940000154965.A.b	ENSGT00940000157322.b.a.e.a.b	ENSGT00940000157331.b.b	ENSGT00940000153408.A.ab.a.a
Huchen	MODERN SPECIES	1163													ENSHHUG00000003480	nkx3.3 (ENSHHUG00000003474)	nkx2.3 (ENSHHUG00000003468) #21	got1 (ENSHHUG00000003443) ##22	ENSHHUG00000003432	ENSHHUG00000003429 #24
Salmoninae_a	DUPLICATION
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.a.d.b.a.a ##22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.a.d.b.a.a ##22
Rainbow trout	MODERN SPECIES	12	ENSOMYG00000036954	ENSOMYG00000037387	ENSOMYG00000037486	agpat4 (ENSOMYG00000037674)	ENSOMYG00000038592	kcnk1b (ENSOMYG00000043033)	ENSOMYG00000048427	ENSOMYG00000071543	ENSOMYG00000043047 #33	ENSOMYG00000043052 #35	ENSOMYG00000043076	ENSOMYG00000055904	slc25a28 (ENSOMYG00000043085) #20	nkx3.3 (ENSOMYG00000043095)	nkx2.3 (ENSOMYG00000043096) #21	got1 (ENSOMYG00000043106) ##22	ENSOMYG00000043114	CNNM1 (ENSOMYG00000043115) #23	HPSE2 (ENSOMYG00000043124) #24	ENSOMYG00000050654	st3gal7 (ENSOMYG00000043139)	ENSOMYG00000043152 #36	ENSOMYG00000043163	ENSOMYG00000049940	ENSOMYG00000043157	ENSOMYG00000043182	ENSOMYG00000054489	ENSOMYG00000056488	ENSOMYG00000043343	ENSOMYG00000057240	ENSOMYG00000043263
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.a.d.b.a.a ##22
Coho salmon	MODERN SPECIES	2	ENSOKIG00005002606	pyroxd2 (ENSOKIG00005002542)	zgc:123010 (ENSOKIG00005002515)	LOXL4 (ENSOKIG00005002470) #27	CRTAC1 (ENSOKIG00005002299) #29	golga7ba (ENSOKIG00005002166) #30	sfrp5 (ENSOKIG00005002138) #31	zgc:171482 (ENSOKIG00005002110)	marveld1 (ENSOKIG00005002094) #33	PI4K2A (ENSOKIG00005002051) #35	ENSOKIG00005002018	ENSOKIG00005001992	slc25a28 (ENSOKIG00005001976) #20	nkx3.3 (ENSOKIG00005001963)	nkx2.3 (ENSOKIG00005001956) #21	got1 (ENSOKIG00005046953) ##22	CNNM1 (ENSOKIG00005046942) #23	HPSE2 (ENSOKIG00005046923) #24	hps1 (ENSOKIG00005046906) #25	ENSOKIG00005046894	ENSOKIG00005046888	slit1a (ENSOKIG00005046443)	ARHGAP19 (ENSOKIG00005046354)	XPO5 (ENSOKIG00005046247)	ENSOKIG00005046187	khdrbs2 (ENSOKIG00005046157)	prim2 (ENSOKIG00005046100)	rab23 (ENSOKIG00005046082)	bag2 (ENSOKIG00005046067)	ENSOKIG00005046062	ENSOKIG00005046036
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00390000012017	ENSGT00940000157846.c.c	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000165701.g	ENSGT00990000204854.d	ENSGT00940000155293.a.a.i	ENSGT00940000165757.c.b.b	ENSGT00940000163723.A.f.a	ENSGT00510000049375.g #33	ENSGT00390000010434.b.d.b #35	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00530000064017.a.f	ENSGT00940000157049.c.b.b #20	ENSGT00940000165452.a.h	ENSGT00940000157556.a.b.f #21	ENSGT00950000183082.b.b.a.a.d.b.a.b ##22	ENSGT00950000183082.b.b.a.a.d.b.b ##22	ENSGT00940000157525.b.d #23	ENSGT00390000004874.a.a.ub #24	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b.b	ENSGT00940000154965.A.a	ENSGT00940000157322.b.a.e.b	ENSGT00970000193390.c.a.b.a.a.a	ENSGT00940000153408.A.`b	ENSGT00940000157134.h.a	ENSGT00390000009790.d	ENSGT00940000155064.n	ENSGT00390000017590.d
Salmo	ANCESTRAL SPECIES	38	ENSGT00390000012017	ENSGT00940000157846.c.c	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000165701.g	ENSGT00990000204854.d	ENSGT00940000155293.a.a.i	ENSGT00940000165757.c.b.b	ENSGT00940000163723.A.f.a	ENSGT00510000049375.g #33	ENSGT00390000010434.b.d.b #35	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00530000064017.a.f	ENSGT00940000157049.c.b.a.a #20	ENSGT00940000165452.a.h	ENSGT00940000157556.a.b.f #21	ENSGT00950000183082.b.b.a.a.d.b.a.b ##22	ENSGT00950000183082.b.b.a.a.d.b.b ##22	ENSGT00940000157525.b.d #23	ENSGT00390000004874.a.a.ub #24	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b.b	ENSGT00940000154965.A.a	ENSGT00940000157322.b.a.e.b	ENSGT00970000193390.c.a.b.a.a.a	ENSGT00940000153408.A.`b	ENSGT00940000157134.h.a	ENSGT00390000009790.d	ENSGT00940000155064.n	ENSGT00390000017590.d
River trout	MODERN SPECIES	1	ENSSTUG00000018109	agpat4 (ENSSTUG00000018116)	ENSSTUG00000018149	ENSSTUG00000018776	kcnk1b (ENSSTUG00000018792)	zgc:171482 (ENSSTUG00000018804)	ENSSTUG00000018821	ENSSTUG00000018828	marveld1 (ENSSTUG00000018853) #33	pi4k2a (ENSSTUG00000018858) #35	ENSSTUG00000018882	ENSSTUG00000018905	slc25a28 (ENSSTUG00000018986) #20	nkx3.3 (ENSSTUG00000019026)	nkx2.3 (ENSSTUG00000019037) #21	got1 (ENSSTUG00000019061) ##22	CNNM1 (ENSSTUG00000019181) #23	HPSE2 (ENSSTUG00000019224) #24	st3gal7 (ENSSTUG00000019350)	ENSSTUG00000030526	morn4 (ENSSTUG00000030530) #36	ENSSTUG00000030543	ENSSTUG00000030548	slit1a (ENSSTUG00000030646)	ENSSTUG00000033390	XPO5 (ENSSTUG00000033420)	ENSSTUG00000033953	khdrbs2 (ENSSTUG00000033974)	rab23 (ENSSTUG00000033997)	bag2 (ENSSTUG00000034015)	ENSSTUG00000034022
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.a.d.b.a.b ##22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.a.d.b.a.b ##22
Coho salmon	MODERN SPECIES	17	ENSOKIG00005012263	THBS2 (ENSOKIG00005012323)	agpat4 (ENSOKIG00005012600)	ENSOKIG00005012935	ENSOKIG00005018075	kcnk1b (ENSOKIG00005018080)	ENSOKIG00005018083	ENSOKIG00005018091	MARVELD1 (ENSOKIG00005018097) #33	ENSOKIG00005018101 #35	ENSOKIG00005018154	ENSOKIG00005018168	slc25a28 (ENSOKIG00005018176) #20	nkx3.3 (ENSOKIG00005018199)	nkx2.3 (ENSOKIG00005018206) #21	got1 (ENSOKIG00005018218) ##22	CNNM1 (ENSOKIG00005018273) #23	HPSE2 (ENSOKIG00005018314) #24	ENSOKIG00005018361	st3gal7 (ENSOKIG00005018367)	ENSOKIG00005018379	morn4 (ENSOKIG00005018386) #36	ENSOKIG00005018396	ENSOKIG00005018414	SLIT1 (ENSOKIG00005018648)	ENSOKIG00005023662	XPO5 (ENSOKIG00005023684)	ENSOKIG00005023791	ENSOKIG00005023811	ENSOKIG00005023848	ENSOKIG00005023920
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00940000157846.c.c	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000165701.g	ENSGT00990000204854.d	ENSGT00940000155293.a.a.i	ENSGT00940000165757.c.b.b	ENSGT00940000163723.A.f.a	ENSGT00510000049375.g #33	ENSGT00390000010434.b.d.b #35	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00530000064017.a.f	ENSGT00940000157049.c.b.b #20	ENSGT00940000165452.a.h	ENSGT00940000157556.a.b.f #21	ENSGT00950000183082.b.b.a.a.d.b.a.b ##22	ENSGT00950000183082.b.b.a.a.d.b.b ##22	ENSGT00940000157525.b.d #23	ENSGT00390000004874.a.a.ub #24	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b.b	ENSGT00940000154965.A.a	ENSGT00940000157322.b.a.e.b	ENSGT00970000193390.c.a.b.a.a.a	ENSGT00940000153408.A.`b	ENSGT00940000157134.h.a	ENSGT00390000009790.d	ENSGT00940000155064.n	ENSGT00390000017590.d	ENSGT00940000166866.d
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00390000011433.s.a.f	ENSGT00390000012017	ENSGT00940000157846.c.c	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000165701.g	ENSGT00940000155293.a.a.i	ENSGT00940000165757.c.a.b	ENSGT01060000253683	ENSGT00510000049375.g #33	ENSGT00390000010434.b.d.b #35	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00530000064017.a.f	ENSGT00940000157049.c.b.b #20	ENSGT00940000165452.a.h	ENSGT00940000157556.a.b.f #21	ENSGT00950000183082.b.b.a.a.d.b.b ##22	ENSGT00940000157525.b.d #23	ENSGT00390000004874.a.a.ub #24	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b.b	ENSGT00940000154965.A.a	ENSGT00940000157322.b.a.e.b	ENSGT00970000193390.c.a.b.a.a.a.b	ENSGT00970000193390.c.a.b.a.a.a.a.a	ENSGT00940000153408.A.`b	ENSGT00940000157134.h.a	ENSGT00390000009790.d	ENSGT00940000155064.n	ENSGT00390000017590.d
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00390000011433.s.a.f	ENSGT00390000012017	ENSGT00940000157846.c.c	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000165701.g	ENSGT00940000155293.a.a.i	ENSGT00940000165757.c.a.b	ENSGT01060000253683	ENSGT00510000049375.g #33	ENSGT00390000010434.b.d.b #35	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00530000064017.a.f	ENSGT00940000157049.c.b.b #20	ENSGT00940000165452.a.h	ENSGT00940000157556.a.b.f #21	ENSGT00950000183082.b.b.a.a.d.b.b ##22	ENSGT00940000157525.b.d #23	ENSGT00390000004874.a.a.ub #24	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b.b	ENSGT00940000154965.A.a	ENSGT00940000157322.b.a.e.b	ENSGT00970000193390.c.a.b.a.a.a.b	ENSGT00970000193390.c.a.b.a.a.a.a.a	ENSGT00940000153408.A.`b	ENSGT00940000157134.h.a	ENSGT00390000009790.d	ENSGT00940000155064.n	ENSGT00390000017590.d
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	17	STON1 (ENSOTSG00005023892)	LHCGR (ENSOTSG00005023894)	NRXN1 (ENSOTSG00005023915)	ENSOTSG00005025370	ENSOTSG00005025372	erlec1 (ENSOTSG00005025375)	PSME4 (ENSOTSG00005026777)	ENSOTSG00005027450	ENSOTSG00005027451	THBS2 (ENSOTSG00005027465)	agpat4 (ENSOTSG00005029064)	ENSOTSG00005029107	kcnk1b (ENSOTSG00005034403)	nkx3.3 (ENSOTSG00005034405)	nkx2.3 (ENSOTSG00005034407) #21	got1 (ENSOTSG00005034411) ##22	CNNM1 (ENSOTSG00005034416) #23	HPSE2 (ENSOTSG00005034422) #24	ENSOTSG00005034426	st3gal7 (ENSOTSG00005034429)	morn4 (ENSOTSG00005034430) #36	ENSOTSG00005034432	slit1a (ENSOTSG00005034436)	XPO5 (ENSOTSG00005034518)	ENSOTSG00005034611	cpn1 (ENSOTSG00005034612) #14	rab23 (ENSOTSG00005002619)	bag2 (ENSOTSG00005002622)	ENSOTSG00005002625	DST (ENSOTSG00005002828)	ENSOTSG00005011804
Chinook salmon	MODERN SPECIES	3005		slc25a28 (ENSOTSG00005039703) #20	ENSOTSG00005039705	ENSOTSG00005039707	pi4k2a (ENSOTSG00005039727) #35	marveld1 (ENSOTSG00005039801) #33	ENSOTSG00005039803	ENSOTSG00005039814	ENSOTSG00005039818	pi4k2a (ENSOTSG00005039829) #35	ENSOTSG00005039941	ENSOTSG00005039943	slc25a28 (ENSOTSG00005039947) #20	nkx3.3 (ENSOTSG00005039949)	nkx2.3 (ENSOTSG00005039950) #21	got1 (ENSOTSG00005039951) ##22	CNNM1 (ENSOTSG00005039953) #23	HPSE2 (ENSOTSG00005039955) #24	ENSOTSG00005039960	st3gal7 (ENSOTSG00005039961)	morn4 (ENSOTSG00005039963) #36	ENSOTSG00005039967	ENSOTSG00005039966	slit1a (ENSOTSG00005039978)
Salmo	ANCESTRAL SPECIES	38	ENSGT00940000157846.c.c	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000165701.g	ENSGT00990000204854.d	ENSGT00940000155293.a.a.i	ENSGT00940000165757.c.b.b	ENSGT00940000163723.A.f.a	ENSGT00510000049375.g #33	ENSGT00390000010434.b.d.b #35	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00530000064017.a.f	ENSGT00940000157049.c.b.a.a #20	ENSGT00940000165452.a.h	ENSGT00940000157556.a.b.f #21	ENSGT00950000183082.b.b.a.a.d.b.a.b ##22	ENSGT00950000183082.b.b.a.a.d.b.b ##22	ENSGT00940000157525.b.d #23	ENSGT00390000004874.a.a.ub #24	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.a.b.b	ENSGT00940000154965.A.a	ENSGT00940000157322.b.a.e.b	ENSGT00970000193390.c.a.b.a.a.a	ENSGT00940000153408.A.`b	ENSGT00940000157134.h.a	ENSGT00390000009790.d	ENSGT00940000155064.n	ENSGT00390000017590.d	ENSGT00940000166866.d
Atlantic salmon	MODERN SPECIES	20	ENSSSAG00000075436	kcnk1b (ENSSSAG00000075442)	ENSSSAG00000110104	ENSSSAG00000099101	ENSSSAG00000088446 #33	ENSSSAG00000083955	ENSSSAG00000075553	ENSSSAG00000101173	ENSSSAG00000122151 #35	ENSSSAG00000105715	slc25a28 (ENSSSAG00000075557) #20	ENSSSAG00000090773	nkx3.3 (ENSSSAG00000111355)	nkx2.3 (ENSSSAG00000091368) #21	ENSSSAG00000090388	got1 (ENSSSAG00000117439) ##22	CNNM1 (ENSSSAG00000001038) #23	HPSE2 (ENSSSAG00000001058) #24	ENSSSAG00000115096	st3gal7 (ENSSSAG00000075576)	ENSSSAG00000075577	morn4 (ENSSSAG00000075578) #36	ENSSSAG00000088434	ENSSSAG00000121541	ENSSSAG00000075660	ENSSSAG00000001603	KHDRBS2 (ENSSSAG00000077738)	PRIM2 (ENSSSAG00000077752)	rab23 (ENSSSAG00000083099)	ENSSSAG00000109425	bag2 (ENSSSAG00000077777)
Otomorpha	ANCESTRAL SPECIES	55	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.e #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00940000177979	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162611.a.b	ENSGT00940000162611.b	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18
Otophysi	ANCESTRAL SPECIES	26	ENSGT00390000013106	ENSGT00940000155032.k	ENSGT00390000000464	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00510000049375 #33	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.e #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162535	ENSGT00390000004632	ENSGT00940000154704.d.b	ENSGT00940000165723.b	ENSGT00440000038232	ENSGT00940000156675.c	ENSGT00940000155309.o	ENSGT00940000154445.a
Characiphysae	ANCESTRAL SPECIES	13	ENSGT00390000013106	ENSGT00940000155032.k	ENSGT00390000000464	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00510000049375 #33	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.e #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162535	ENSGT00390000004632	ENSGT00940000154704.d.b	ENSGT00940000165723.b	ENSGT00940000156675.c	ENSGT00940000155309.o	ENSGT00940000154445.a	ENSGT00940000156883	ENSGT00510000047589
Characiphysae_b	ANCESTRAL SPECIES	10	ENSGT00390000013106	ENSGT00940000155032.k	ENSGT00390000000464	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00510000049375 #33	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.e #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162535	ENSGT00390000004632	ENSGT00940000154704.d.b	ENSGT00940000165723.b	ENSGT00940000156675.c	ENSGT00940000155309.o	ENSGT00940000154445.a	ENSGT00940000156883	ENSGT00510000047589
Characoidei	ANCESTRAL SPECIES	5	ENSGT00390000013106	ENSGT00940000155032.k	ENSGT00390000000464	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00510000049375 #33	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.e #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162535	ENSGT00390000004632	ENSGT00940000154704.d.b	ENSGT00940000165723.b	ENSGT00940000156675.c	ENSGT00940000155309.o	ENSGT00940000154445.a	ENSGT00940000156883	ENSGT00510000047589
Red-bellied piranha	MODERN SPECIES	10	mettl18 (ENSPNAG00000000356)	pgam1a (ENSPNAG00000007625)	marveld1 (ENSPNAG00000000351) #33	zgc:171482 (ENSPNAG00000007619)	sfrp5 (ENSPNAG00000000343) #31	ENSPNAG00000000340	ENSPNAG00000000338	GOLGA7B (ENSPNAG00000007606) #30	CRTAC1 (ENSPNAG00000000329) #29	LOXL4 (ENSPNAG00000000318) #27	zgc:123010 (ENSPNAG00000007579)	pyroxd2 (ENSPNAG00000000311)	slc25a28 (ENSPNAG00000000304) #20	nkx3.3 (ENSPNAG00000005540)	nkx2.3 (ENSPNAG00000005006) #21	got1 (ENSPNAG00000000299) ##22	CNNM1 (ENSPNAG00000030104) #23	HPSE2 (ENSPNAG00000030103) #24	hps1 (ENSPNAG00000030102) #25	st3gal7 (ENSPNAG00000030096)	ENSPNAG00000030093	morn4 (ENSPNAG00000030091) #36	nkx1.2la (ENSPNAG00000030090)	prkg1a (ENSPNAG00000030089)	dkk1a (ENSPNAG00000030084)	pcdh15a (ENSPNAG00000030069)	ENSPNAG00000030016	cisd1 (ENSPNAG00000030012)	DHX57 (ENSPNAG00000030009)	galm (ENSPNAG00000030001)	atl2 (ENSPNAG00000029989)
Mexicana tetra	MODERN SPECIES	17	ubtd1a (ENSAMXG00000043652)	zdhhc16a (ENSAMXG00000002308)	pgam1a (ENSAMXG00000032198)	mettl18 (ENSAMXG00000041233)	marveld1 (ENSAMXG00000002301) #33	zgc:171482 (ENSAMXG00000002299)	sfrp5 (ENSAMXG00000035696) #31	GOLGA7B (ENSAMXG00000034309) #30	CRTAC1 (ENSAMXG00000042122) #29	LOXL4 (ENSAMXG00000002265) #27	zgc:123010 (ENSAMXG00000041967)	pyroxd2 (ENSAMXG00000002255)	slc25a28 (ENSAMXG00000035752) #20	nkx3.3 (ENSAMXG00000032822)	nkx2.3 (ENSAMXG00000032911) #21	got1 (ENSAMXG00000002245) ##22	CNNM1 (ENSAMXG00000002241) #23	HPSE2 (ENSAMXG00000002240) #24	ENSAMXG00000030747	hps1 (ENSAMXG00000002227) #25	st3gal7 (ENSAMXG00000037674)	ANKRD2 (ENSAMXG00000002218)	morn4 (ENSAMXG00000029923) #36	nkx1.2la (ENSAMXG00000034353)	ENSAMXG00000031664	prkg1a (ENSAMXG00000002208)	dkk1a (ENSAMXG00000036955)	pcdh15a (ENSAMXG00000002174)	ENSAMXG00000043287	ENSAMXG00000037132	ENSAMXG00000035834
Electric eel	MODERN SPECIES	1	mettl18 (ENSEEEG00000003005)	ENSEEEG00000003008	ENSEEEG00000003014	marveld1 (ENSEEEG00000003037) #33	ENSEEEG00000003040	zgc:171482 (ENSEEEG00000003042)	sfrp5 (ENSEEEG00000003044) #31	GOLGA7B (ENSEEEG00000003050) #30	CRTAC1 (ENSEEEG00000003086) #29	LOXL4 (ENSEEEG00000003102) #27	ENSEEEG00000003295	pyroxd2 (ENSEEEG00000003301)	slc25a28 (ENSEEEG00000003354) #20	nkx3.3 (ENSEEEG00000003355)	nkx2.3 (ENSEEEG00000003356) #21	got1 (ENSEEEG00000003358) ##22	CNNM1 (ENSEEEG00000003359) #23	HPSE2 (ENSEEEG00000003368) #24	hps1 (ENSEEEG00000003372) #25	st3gal7 (ENSEEEG00000003373)	morn4 (ENSEEEG00000003374) #36	nkx1.2la (ENSEEEG00000003375)	prkg1a (ENSEEEG00000003379)	dkk1a (ENSEEEG00000003389)	pcdh15a (ENSEEEG00000003396)	ENSEEEG00000003400	cisd1 (ENSEEEG00000003401)	DHX57 (ENSEEEG00000003403)	galm (ENSEEEG00000003433)	atl2 (ENSEEEG00000003481)	hells (ENSEEEG00000004554)
Channel catfish	MODERN SPECIES	22	ZDHHC16 (ENSIPUG00000000333)	mettl18 (ENSIPUG00000000340)	pgam1a (ENSIPUG00000000343)	marveld1 (ENSIPUG00000000351) #33	ENSIPUG00000000356	zgc:171482 (ENSIPUG00000000361)	sfrp5 (ENSIPUG00000000363) #31	GOLGA7B (ENSIPUG00000000366) #30	crtac1 (ENSIPUG00000000369) #29	LOXL4 (ENSIPUG00000000704) #27	ENSIPUG00000000715	pyroxd2 (ENSIPUG00000000727)	slc25a28 (ENSIPUG00000000758) #20	nkx3.3 (ENSIPUG00000000771)	Nkx2-3 (ENSIPUG00000000774) #21	got1 (ENSIPUG00000000781) ##22	cnnm1 (ENSIPUG00000000793) #23	hpse2 (ENSIPUG00000000802) #24	hps1 (ENSIPUG00000000808) #25	st3gal7 (ENSIPUG00000000817)	ENSIPUG00000000831	morn4 (ENSIPUG00000000904)	nkx1.2la (ENSIPUG00000000917)	PRKG1 (ENSIPUG00000000923)	dkk1a (ENSIPUG00000001048)	pcdh15a (ENSIPUG00000001088)	ENSIPUG00000002311	ckba (ENSIPUG00000002321)	ENSIPUG00000002368	ENSIPUG00000002379	Cisd1 (ENSIPUG00000002387)
Cyprinoidei	ANCESTRAL SPECIES	38	ENSGT00390000003939.c	ENSGT00390000003939.d	ENSGT00940000166602.B	ENSGT00390000008727.a.a.d.j	ENSGT00510000049375.c #33	ENSGT00940000165757.d	ENSGT00940000160608 #31	ENSGT00390000000134.a.e #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g #36	ENSGT00940000162535	ENSGT00390000004632	ENSGT00940000154704.d.b	ENSGT00940000165723.b	ENSGT00440000038232	ENSGT00940000156675.c	ENSGT00940000155309.o	ENSGT00940000154445.a	ENSGT00950000183132.B
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	166	ENSGT00940000157565.n	ENSGT00940000162787.c.a	ENSGT00390000003939.c	ENSGT00390000008727.a.a.d.j.b	ENSGT00510000049375.c.a.b #33	ENSGT00940000165757.d.s.b	ENSGT00940000160608.h #31	ENSGT00390000000134.a.e.b #30	ENSGT00390000013726.c.a #29	ENSGT00940000157042.c.a.b #27	ENSGT00940000161036.B.a.a	ENSGT00940000164861.b	ENSGT00940000157049.e.a #20	ENSGT00940000165452.a.e.a	ENSGT00940000157556.a.b.a #21	ENSGT00950000183082.b.b.a.a.e ##22	ENSGT00940000157525.b.b #23	ENSGT00390000004874.a.a.sb #24	ENSGT00390000015298.h #25	ENSGT00730000111173.g.a.b #36	ENSGT00940000162535.a	ENSGT00940000154704.d.b.d.a.b	ENSGT00940000165723.b.c	ENSGT00940000156675.c.d	ENSGT00940000155309.o.a	ENSGT00940000154445.a.a	ENSGT00390000003094.eb	ENSGT00950000183037.B.a.m	ENSGT00950000182992.a.b.a.a.d	ENSGT00940000157736.r	ENSGT01100000263502.A.a.b.c
Cyprininae_a	ANCESTRAL SPECIES	29	ENSGT00940000157565.n	ENSGT00940000162787.c.a	ENSGT00390000003939.c	ENSGT00390000008727.a.a.d.j.b	ENSGT00510000049375.c.a.b #33	ENSGT00940000165757.d.s.b	ENSGT00940000160608.h #31	ENSGT00390000000134.a.e.b #30	ENSGT00390000013726.c.a #29	ENSGT00940000157042.c.a.b #27	ENSGT00940000161036.B.a.a	ENSGT00940000164861.b	ENSGT00940000157049.e.a #20	ENSGT00940000165452.a.e.a	ENSGT00940000157556.a.b.a #21	ENSGT00950000183082.b.b.a.a.e ##22	ENSGT00940000157525.b.b #23	ENSGT00390000004874.a.a.sb #24	ENSGT00390000015298.h #25	ENSGT00730000111173.g.a.b #36	ENSGT00940000162535.a	ENSGT00940000154704.d.b.d.a.b	ENSGT00940000165723.b.c	ENSGT00940000156675.c.d	ENSGT00940000155309.o.a	ENSGT00940000154445.a.a	ENSGT01030000236031	ENSGT00390000003094.eb	ENSGT00950000183037.B.a.m	ENSGT00950000182992.a.b.a.a.d	ENSGT00940000157736.r
Common carp reference	MODERN SPECIES	18	col9a1b (ENSCCRG00000056439)	fam135a (ENSCCRG00000032867)	zgc:172136 (ENSCCRG00000032840)	ENSCCRG00000032856	ENSCCRG00000067128	ENSCCRG00000064721 #33	zgc:171482 (ENSCCRG00000077809)	sfrp5 (ENSCCRG00000061041) #31	GOLGA7B (ENSCCRG00000057182) #30	CRTAC1 (ENSCCRG00000081317) #29	LOXL4 (ENSCCRG00000002090) #27	zgc:123010 (ENSCCRG00000076868)	pyroxd2 (ENSCCRG00000051963)	slc25a28 (ENSCCRG00000068571) #20	nkx3.3 (ENSCCRG00000035993)	got1 (ENSCCRG00000036001) ##22	nkx2.3 (ENSCCRG00000035995) #21	CNNM1 (ENSCCRG00000080110) #23	ENSCCRG00000067066	HPSE2 (ENSCCRG00000001819) #24	hps1 (ENSCCRG00000072134) #25	ENSCCRG00000075057	morn4 (ENSCCRG00000001790) #36	nkx1.2la (ENSCCRG00000056769)	prkg1a (ENSCCRG00000029561)	prkg1a (ENSCCRG00000013414)	dkk1a (ENSCCRG00000013419)	pcdh15a (ENSCCRG00000021498)	ENSCCRG00000057618	ENSCCRG00000044967	cisd1 (ENSCCRG00000064079)
Golden-line barbel	MODERN SPECIES	76			pcdh10b (ENSSGRG00000039441)	ENSSGRG00000039455	adra1bb (ENSSGRG00000039456)	adh5 (ENSSGRG00000039460)	eif4ea (ENSSGRG00000039472)	gar1 (ENSSGRG00000039477)	CRTAC1 (ENSSGRG00000039483) #29	LOXL4 (ENSSGRG00000039488) #27	zgc:123010 (ENSSGRG00000039496)	pyroxd2 (ENSSGRG00000039502)	slc25a28 (ENSSGRG00000039505) #20	nkx3.3 (ENSSGRG00000039506)	nkx2.3 (ENSSGRG00000039508) #21	got1 (ENSSGRG00000039513) ##22	ENSSGRG00000039534 #23	HPSE2 (ENSSGRG00000039537) #24	hps1 (ENSSGRG00000039548) #25	st3gal7 (ENSSGRG00000039553)	ANKRD2 (ENSSGRG00000039555)	ENSSGRG00000039556	nkx1.2la (ENSSGRG00000039560)	prkg1a (ENSSGRG00000039565)	dkk1a (ENSSGRG00000039601)	pcdh15a (ENSSGRG00000039622)	ENSSGRG00000039711	ENSSGRG00000039716	cisd1 (ENSSGRG00000039719)	ENSSGRG00000039723	nanp (ENSSGRG00000039728)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	4	eif3s6ip (ENSCARG00000020859)	SMOC2 (ENSCARG00000020807)	dact2 (ENSCARG00000020795)	ablim1a (ENSCARG00000020260)	ENSCARG00000020216	fhip2a (ENSCARG00000019575)	zfyve21 (ENSCARG00000019523)	MDGA1 (ENSCARG00000019162)	ENSCARG00000019133	LOXL4 (ENSCARG00000019129) #27	zgc:123010 (ENSCARG00000019115)	pyroxd2 (ENSCARG00000019047)	slc25a28 (ENSCARG00000019023) #20	nkx3.3 (ENSCARG00000019016)	nkx2.3 (ENSCARG00000019008) #21	got1 (ENSCARG00000018955) ##22	CNNM1 (ENSCARG00000018945) #23	ENSCARG00000018939 #24	dkk1a (ENSCARG00000018928)	nkx1.2la (ENSCARG00000018921)	prkg1a (ENSCARG00000018840)	utp25 (ENSCARG00000018801)	SYT14 (ENSCARG00000018786)	SERTAD4 (ENSCARG00000018781)	hif1aa (ENSCARG00000018698)	ENSCARG00000018683	dhrs7 (ENSCARG00000018673)	ppm1aa (ENSCARG00000018657)	ly6pge (ENSCARG00000018652)	ENSCARG00000018615	MYOF (ENSCARG00000015344)
Goldfish	MODERN SPECIES	4	NIN (ENSCARG00000002423)	pygl (ENSCARG00000002133)	trim9 (ENSCARG00000001975)	tmx1 (ENSCARG00000001934)	frmd6 (ENSCARG00000036946)	esr2b (ENSCARG00000036798)	ENSCARG00000036761	gphb5 (ENSCARG00000036755)	KCNH5 (ENSCARG00000036613)	ppp2r5eb (ENSCARG00000036391)	SGPP1 (ENSCARG00000036371)	SYT16 (ENSCARG00000036358)	ENSCARG00000036334	ENSCARG00000036328	ENSCARG00000036315	got1 (ENSCARG00000036264) ##22	ENSCARG00000036246 #23	HPSE2 (ENSCARG00000036161) #24	ENSCARG00000036144	morn4 (ENSCARG00000036134) #36	nkx1.2la (ENSCARG00000036120)	prkg1a (ENSCARG00000035973)	dkk1a (ENSCARG00000035957)	ENSCARG00000035947	pcdh15a (ENSCARG00000027824)	cisd1 (ENSCARG00000027451)	nanp (ENSCARG00000027436)	cyp1b1 (ENSCARG00000027420)	ENSCARG00000027398	cdc42ep3 (ENSCARG00000027386)	opn3 (ENSCARG00000027367)
Cyprininae	ANCESTRAL SPECIES	4	ENSGT00940000162787.c.b	ENSGT00940000166602.B	ENSGT00390000008727.a.a.d.j.a	ENSGT00510000049375.c.a.a #33	ENSGT00510000049375.c.b #33	ENSGT00940000165757.d.s.a	ENSGT00940000160608.g #31	ENSGT00390000000134.a.e.a #30	ENSGT00390000013726.c.b #29	ENSGT00940000157042.c.a.a #27	ENSGT00940000161036.B.a.b	ENSGT00940000164861.a	ENSGT00940000157049.f #20	ENSGT00940000165452.a.e.b	ENSGT00940000157556.a.b.b #21	ENSGT00950000183082.b.b.a.a.f ##22	ENSGT00940000157525.b.a #23	ENSGT00390000004874.a.a.rb.a #24	ENSGT00390000015298.g #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g.a.a #36	ENSGT00940000162535.b	ENSGT00940000154704.d.b.d.a.a	ENSGT00390000004632	ENSGT00940000154704.d.b.c	ENSGT00940000165723.b.d	ENSGT00940000156675.c.c	ENSGT00940000155309.o.b	ENSGT00940000154445.a.b	ENSGT00950000183132.B
Cyprininae_a	ANCESTRAL SPECIES	202	ENSGT00940000162787.c.b	ENSGT00940000166602.B	ENSGT00390000008727.a.a.d.j.a	ENSGT00510000049375.c.a.a #33	ENSGT00510000049375.c.b #33	ENSGT00940000165757.d.s.a	ENSGT00940000160608.g #31	ENSGT00390000000134.a.e.a #30	ENSGT00390000013726.c.b #29	ENSGT00940000157042.c.a.a #27	ENSGT00940000161036.B.a.b	ENSGT00940000164861.a	ENSGT00940000157049.f #20	ENSGT00940000165452.a.e.b	ENSGT00940000157556.a.b.b #21	ENSGT00950000183082.b.b.a.a.f ##22	ENSGT00940000157525.b.a #23	ENSGT00390000004874.a.a.rb.a #24	ENSGT00390000015298.g #25	ENSGT00940000165889	ENSGT00940000153956.b	ENSGT00730000111173.g.a.a #36	ENSGT00940000162535.b	ENSGT00940000154704.d.b.d.a.a	ENSGT00390000004632	ENSGT00940000154704.d.b.c	ENSGT00940000165723.b.d	ENSGT00940000156675.c.c	ENSGT00940000155309.o.b	ENSGT00940000154445.a.b	ENSGT00950000183132.B
Golden-line barbel	MODERN SPECIES	296		col9a1b (ENSSGRG00000025991)	ENSSGRG00000025989	zgc:172136 (ENSSGRG00000025987)	SLC35F3 (ENSSGRG00000025982)	marveld1 (ENSSGRG00000025981) #33	ENSSGRG00000025978	sfrp5 (ENSSGRG00000025975) #31	GOLGA7B (ENSSGRG00000025971) #30	CRTAC1 (ENSSGRG00000025970) #29	LOXL4 (ENSSGRG00000025837) #27	zgc:123010 (ENSSGRG00000025836)	pyroxd2 (ENSSGRG00000025778)	slc25a28 (ENSSGRG00000025777) #20	nkx2.3 (ENSSGRG00000025775) #21	got1 (ENSSGRG00000025773) ##22	CNNM1 (ENSSGRG00000025771) #23	HPSE2 (ENSSGRG00000025762) #24	hps1 (ENSSGRG00000025761) #25	st3gal7 (ENSSGRG00000025760)	morn4 (ENSSGRG00000025759) #36	nkx1.2la (ENSSGRG00000025758)	ENSSGRG00000025757	ENSSGRG00000025754	dkk1a (ENSSGRG00000025751)	pcdh15a (ENSSGRG00000025496)
Common carp reference	MODERN SPECIES	48	fam135a (ENSCCRG00000032891)	zgc:172136 (ENSCCRG00000024428)	ENSCCRG00000002885	ENSCCRG00000082523	marveld1 (ENSCCRG00000061224) #33	zgc:171482 (ENSCCRG00000054354)	sfrp5 (ENSCCRG00000059427) #31	CRTAC1 (ENSCCRG00000038325) #29	GOLGA7B (ENSCCRG00000023763) #30	ENSCCRG00000042003 #27	zgc:123010 (ENSCCRG00000051966)	pyroxd2 (ENSCCRG00000024966)	slc25a28 (ENSCCRG00000024950) #20	nkx3.3 (ENSCCRG00000048165)	nkx2.3 (ENSCCRG00000051959) #21	got1 (ENSCCRG00000016069) ##22	CNNM1 (ENSCCRG00000051557) #23	HPSE2 (ENSCCRG00000020309) #24	hps1 (ENSCCRG00000031229) #25	st3gal7 (ENSCCRG00000030262)	ENSCCRG00000030260	morn4 (ENSCCRG00000074100) #36	nkx1.2la (ENSCCRG00000039674)	ENSCCRG00000077794	prkg1a (ENSCCRG00000068391)	dkk1a (ENSCCRG00000031556)	pcdh15a (ENSCCRG00000068216)	ENSCCRG00000058992	cisd1 (ENSCCRG00000066341)	polr1b (ENSCCRG00000045007)	ENSCCRG00000080158
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	343	fam135a (ENSCARG00000052542)	zgc:172136 (ENSCARG00000052471)	ENSCARG00000052450	SLC35F3 (ENSCARG00000052425)	marveld1 (ENSCARG00000052412) #33	zgc:171482 (ENSCARG00000052388)	sfrp5 (ENSCARG00000052367) #31	GOLGA7B (ENSCARG00000052355) #30	CRTAC1 (ENSCARG00000051270) #29	LOXL4 (ENSCARG00000051164) #27	zgc:123010 (ENSCARG00000051020)	pyroxd2 (ENSCARG00000050386)	slc25a28 (ENSCARG00000050350) #20	nkx3.3 (ENSCARG00000050342)	nkx2.3 (ENSCARG00000050323) #21	got1 (ENSCARG00000050305) ##22	CNNM1 (ENSCARG00000050265) #23	HPSE2 (ENSCARG00000050182) #24	hps1 (ENSCARG00000049925) #25	st3gal7 (ENSCARG00000049890)	ANKRD2 (ENSCARG00000049819)	morn4 (ENSCARG00000049795) #36	nkx1.2la (ENSCARG00000049782)	prkg1a (ENSCARG00000049740)	dkk1a (ENSCARG00000049720)	pcdh15a (ENSCARG00000048883)	ENSCARG00000048787	cisd1 (ENSCARG00000048752)	polr1b (ENSCARG00000048483)	nanp (ENSCARG00000048443)	cyp1b1 (ENSCARG00000048427)
Goldfish	MODERN SPECIES	31	SDHAF4 (ENSCARG00000068213)	smap1 (ENSCARG00000068232)	b3gat2 (ENSCARG00000068307)	OGFRL1 (ENSCARG00000068324)	asrgl1 (ENSCARG00000068335)	sfrp5 (ENSCARG00000068349) #31	GOLGA7B (ENSCARG00000068356) #30	CRTAC1 (ENSCARG00000068383) #29	ENSCARG00000068689	LOXL4 (ENSCARG00000068696) #27	zgc:123010 (ENSCARG00000068708)	pyroxd2 (ENSCARG00000068734)	slc25a28 (ENSCARG00000068831) #20	nkx3.3 (ENSCARG00000068839)	nkx2.3 (ENSCARG00000068846) #21	got1 (ENSCARG00000068854) ##22	CNNM1 (ENSCARG00000068864) #23	HPSE2 (ENSCARG00000068866) #24	cxcl12a (ENSCARG00000068871)	drgx (ENSCARG00000068874)	ENSCARG00000068877	vstm4a (ENSCARG00000068878)	LRRC18 (ENSCARG00000068886)	ENSCARG00000068894	ENSCARG00000068915	ARHGAP22 (ENSCARG00000068922)	mapk8a (ENSCARG00000068974)	ENSCARG00000069249	ENSCARG00000069261	GDF10 (ENSCARG00000069266)	prdm8 (ENSCARG00000069269)
Zebrafish	MODERN SPECIES	4	ENSDARG00000079055	ENSDARG00000092550	ENSDARG00000075970	SLC35F3 (ENSDARG00000059850)	marveld1 (ENSDARG00000011724) #33	zgc:171482 (ENSDARG00000074415)	sfrp5 (ENSDARG00000039041) #31	GOLGA7B (ENSDARG00000105099) #30	CRTAC1 (ENSDARG00000102517) #29	LOXL4 (ENSDARG00000025089) #27	zgc:123010 (ENSDARG00000039082)	pyroxd2 (ENSDARG00000014101)	slc25a28 (ENSDARG00000052994) #20	nkx3.3 (ENSDARG00000069327)	nkx2.3 (ENSDARG00000039095) #21	got1 (ENSDARG00000039093) ##22	CNNM1 (ENSDARG00000078087) #23	HPSE2 (ENSDARG00000078163) #24	hps1 (ENSDARG00000026170) #25	st3gal7 (ENSDARG00000039064)	ANKRD2 (ENSDARG00000002722)	morn4 (ENSDARG00000039062) #36	nkx1.2la (ENSDARG00000006350)	prkg1a (ENSDARG00000020656)	dkk1a (ENSDARG00000014103)	ENSDARG00000101911	pcdh15a (ENSDARG00000098257)	ENSDARG00000109618	ENSDARG00000076699	cisd1 (ENSDARG00000079516)	polr1b (ENSDARG00000077469)
Clupeiformes	ANCESTRAL SPECIES	146	ENSGT00940000165757.c.b.b	ENSGT00940000160608 #31	ENSGT00390000000134.a.e #30	ENSGT00390000013726.c #29	ENSGT00940000157042.c.a #27	ENSGT00940000161036.B.a	ENSGT00940000164861	ENSGT00940000157049 #20	ENSGT00940000165452.a	ENSGT00940000157556.a.b #21	ENSGT00940000177979	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.a ##22	ENSGT00940000157525.b #23	ENSGT00390000004874.a.a #24	ENSGT00390000015298 #25	ENSGT00940000165889	ENSGT00940000153956.b
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	4	ENSCHAG00000009123	PI4K2A (ENSCHAG00000009115) #35	marveld1 (ENSCHAG00000009102) #33	zgc:171482 (ENSCHAG00000009081)	sfrp5 (ENSCHAG00000009066) #31	GOLGA7B (ENSCHAG00000008889) #30	CRTAC1 (ENSCHAG00000008481) #29	LOXL4 (ENSCHAG00000008097) #27	zgc:123010 (ENSCHAG00000008078)	pyroxd2 (ENSCHAG00000007272)	slc25a28 (ENSCHAG00000007238) #20	ENSCHAG00000007211	got1 (ENSCHAG00000007159) ##22	nkx2.3 (ENSCHAG00000007059) #21	ENSCHAG00000007034	got1 (ENSCHAG00000006994) ##22	CNNM1 (ENSCHAG00000006990) #23	HPSE2 (ENSCHAG00000006872) #24	hps1 (ENSCHAG00000006731) #25	st3gal7 (ENSCHAG00000006723)	ENSCHAG00000006713	ENSCHAG00000003211	ENSCHAG00000003045	ENSCHAG00000003010	ENSCHAG00000002982	smndc1 (ENSCHAG00000002928)	ADD3 (ENSCHAG00000002808)	ENSCHAG00000002762	ENSCHAG00000002359	ENSCHAG00000024852	ENSCHAG00000024846
Atlantic herring	MODERN SPECIES	4	ubtd1b (ENSCHAG00000009204)	zdhhc16a (ENSCHAG00000009157)	mettl18 (ENSCHAG00000009147)	ENSCHAG00000009123	PI4K2A (ENSCHAG00000009115) #35	marveld1 (ENSCHAG00000009102) #33	zgc:171482 (ENSCHAG00000009081)	sfrp5 (ENSCHAG00000009066) #31	GOLGA7B (ENSCHAG00000008889) #30	CRTAC1 (ENSCHAG00000008481) #29	LOXL4 (ENSCHAG00000008097) #27	zgc:123010 (ENSCHAG00000008078)	pyroxd2 (ENSCHAG00000007272)	slc25a28 (ENSCHAG00000007238) #20	ENSCHAG00000007211	got1 (ENSCHAG00000007159) ##22	nkx2.3 (ENSCHAG00000007059) #21	ENSCHAG00000007034	got1 (ENSCHAG00000006994) ##22	CNNM1 (ENSCHAG00000006990) #23	HPSE2 (ENSCHAG00000006872) #24	hps1 (ENSCHAG00000006731) #25	st3gal7 (ENSCHAG00000006723)	ENSCHAG00000006713	ENSCHAG00000003211	ENSCHAG00000003045	ENSCHAG00000003010	ENSCHAG00000002982	smndc1 (ENSCHAG00000002928)	ADD3 (ENSCHAG00000002808)	ENSCHAG00000002762
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	13	baiap2l2b (ENSDCDG00000002350)	ncf4 (ENSDCDG00000002348)	IFT27 (ENSDCDG00000002346)	slc25a38b (ENSDCDG00000002345)	rpsa (ENSDCDG00000002337)	ttc26 (ENSDCDG00000002306)	ubn2a (ENSDCDG00000002299)	ENSDCDG00000002295	nptxrb (ENSDCDG00000002289)	ENSDCDG00000002287	ENSDCDG00000002188	atpv0e2 (ENSDCDG00000002173)	ENSDCDG00000002170	ENTPD7 (ENSDCDG00000002163) #19	ENSDCDG00000002154 #21	GOT1 (ENSDCDG00000002146) ##22	ENSDCDG00000002139 #23	ENSDCDG00000002133	hoga1 (ENSDCDG00000002126)	MORN4 (ENSDCDG00000002121) #36	ENSDCDG00000002115	ENSDCDG00000002106	slit1b (ENSDCDG00000001399)	ARHGAP19 (ENSDCDG00000001323)	KCNIP2 (ENSDCDG00000001316)	armh3 (ENSDCDG00000001301)	ldb1b (ENSDCDG00000001084)	si:dkey-93h22.8 (ENSDCDG00000001043)	ENSDCDG00000001004	cant1b (ENSDCDG00000000981)	afmid (ENSDCDG00000000971)
Denticle herring	MODERN SPECIES	11	pgam1a (ENSDCDG00000016692)	marveld1 (ENSDCDG00000016694) #33	ENSDCDG00000016695	zgc:171482 (ENSDCDG00000016698)	sfrp5 (ENSDCDG00000016702) #31	GOLGA7B (ENSDCDG00000016703) #30	CRTAC1 (ENSDCDG00000016710) #29	LOXL4 (ENSDCDG00000016723) #27	zgc:123010 (ENSDCDG00000017041)	pyroxd2 (ENSDCDG00000017052)	ENSDCDG00000017497	ENSDCDG00000017503	slc25a28 (ENSDCDG00000017509) #20	nkx3.3 (ENSDCDG00000017510)	ENSDCDG00000017511	got1 (ENSDCDG00000017514) ##22	CNNM1 (ENSDCDG00000017527) #23	HPSE2 (ENSDCDG00000017533) #24	hps1 (ENSDCDG00000017544) #25	st3gal7 (ENSDCDG00000017558)	ENSDCDG00000017570	FDXR (ENSDCDG00000017618)	ENSDCDG00000019083	unk (ENSDCDG00000019093)	TNNT1 (ENSDCDG00000019119)	ENSDCDG00000019207	ENSDCDG00000020798	st6galnac1.1 (ENSDCDG00000020799)	CASKIN2 (ENSDCDG00000020802)	nme2a (ENSDCDG00000020812)	ca10a (ENSDCDG00000020817)
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Amniota	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Mammalia	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Theria	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Eutheria	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Euarchontoglires	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Primates	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Mouse lemur	MODERN SPECIES	12	TM2D2 (ENSMICG00000003590)	ENSMICG00000045541	PLEKHA2 (ENSMICG00000003578)	TACC1 (ENSMICG00000003570)	FGFR1 (ENSMICG00000009166)	LETM2 (ENSMICG00000009157)	NSD3 (ENSMICG00000009144)	ENSMICG00000042115	DDHD2 (ENSMICG00000030736)	BAG4 (ENSMICG00000046026)	LSM1 (ENSMICG00000030726)	STAR (ENSMICG00000014671)	ASH2L (ENSMICG00000014641)	EIF4EBP1 (ENSMICG00000014636)	ADRB3 (ENSMICG00000027016)	ENSMICG00000047959 ##22	RAB11FIP1 (ENSMICG00000010174)	BRF2 (ENSMICG00000029960)	ADGRA2 (ENSMICG00000010161)	PLPBP (ENSMICG00000042505)	ERLIN2 (ENSMICG00000010152) ##13	ZNF703 (ENSMICG00000010151)	KCNU1 (ENSMICG00000031005)	UNC5D (ENSMICG00000003083)	DUSP26 (ENSMICG00000026693)	RNF122 (ENSMICG00000013127)	TTI2 (ENSMICG00000013113)	MAK16 (ENSMICG00000013106)	FUT10 (ENSMICG00000013099)	NRG1 (ENSMICG00000015565)	WRN (ENSMICG00000010630)
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b ##22
Osteoglossocephalai	ANCESTRAL SPECIES	108									ENSGT00390000013726.d #29	ENSGT00530000063711.b #28	ENSGT00940000157042.c.b #27	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173 #36	ENSGT00940000175336	ENSGT00940000162611.b	ENSGT00940000162611.a	ENSGT00940000154965.A	ENSGT00940000170319	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.b
Clupeocephala	ANCESTRAL SPECIES	97											ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000175336	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000170319	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454 #18	ENSGT00390000002223 #17	ENSGT00940000157798.b	ENSGT00390000002554
Euteleosteomorpha	ANCESTRAL SPECIES	79	ENSGT00390000008221.a	ENSGT00940000167614	ENSGT00940000160104	ENSGT00510000049239.a.d	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00530000063801.a.a	ENSGT00940000178559	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.b
Acanthomorphata	ANCESTRAL SPECIES	89	ENSGT00390000008221.a	ENSGT00940000167614	ENSGT00940000160104	ENSGT00510000049239.a.d	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00530000063801.a.a	ENSGT00940000178559	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	47	ENSGT00900000141021.b.b	ENSGT00940000156518.A	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT00940000176087	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.b
Pinecone sodierfish	MODERN SPECIES		gtf3aa (ENSMMDG00005000618)	yju2b (ENSMMDG00005000612)	c3b.2 (ENSMMDG00005000596)	ENSMMDG00005000586	ENSMMDG00005000584	ENSMMDG00005000581	ENSMMDG00005000578	ENSMMDG00005000571	ENSMMDG00005000566	atpv0e2 (ENSMMDG00005000559)	ENSMMDG00005000554	ENSMMDG00005000550	ENTPD7 (ENSMMDG00005000226) #19	slc25a28 (ENSMMDG00005000099) #20	ENSMMDG00005000092 #21	GOT1 (ENSMMDG00005000079) ##22	CNNM1 (ENSMMDG00005000075) #23	hoga1 (ENSMMDG00005000074)	ENSMMDG00005000073	ENSMMDG00005000072	ENSMMDG00005000070	slit1b (ENSMMDG00005021592)	ARHGAP19 (ENSMMDG00005021496)	ENSMMDG00005021493	ENSMMDG00005021491	ENSMMDG00005021489	ENSMMDG00005021488	ENSMMDG00005021486	ENSMMDG00005021484	ENSMMDG00005021483	ENSMMDG00005021482
Percomorphaceae	ANCESTRAL SPECIES	17	ENSGT00900000141021.b.b	ENSGT00940000156518.A	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT00940000176087	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.b
Tiger tail seahorse	MODERN SPECIES	518	ENSHCOG00000008470	ENSHCOG00000008485	ufl1 (ENSHCOG00000008493)	ENSHCOG00000008556	ENSHCOG00000008567	AXIN1 (ENSHCOG00000008602)	thumpd1 (ENSHCOG00000008618)	ENSHCOG00000008639	REXO5 (ENSHCOG00000008648)	parn (ENSHCOG00000008683)	atpv0e2 (ENSHCOG00000008699)	ENSHCOG00000008711	ENTPD7 (ENSHCOG00000008762) #19	slc25a28 (ENSHCOG00000008780) #20	NKX2-3 (ENSHCOG00000008804) #21	GOT1 (ENSHCOG00000008823) ##22	CNNM1 (ENSHCOG00000008889) #23	hoga1 (ENSHCOG00000008912)	MORN4 (ENSHCOG00000008931) #36	ENSHCOG00000008944	ENSHCOG00000008968	slit1b (ENSHCOG00000009025)	ARHGAP19 (ENSHCOG00000009054)	ENSHCOG00000009071	c3b.2 (ENSHCOG00000009152)	yju2b (ENSHCOG00000009176)	ENSHCOG00000009260	wdr83 (ENSHCOG00000009279)	wdr83os (ENSHCOG00000009291)	stx10 (ENSHCOG00000009302)	ier2b (ENSHCOG00000009318)
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b	ENSGT00990000203852	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Ovalentaria	ANCESTRAL SPECIES		ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Atherinomorphae	ANCESTRAL SPECIES	46										ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Cyprinodontiformes	ANCESTRAL SPECIES	18	ENSGT00940000153408.B.s.b	ENSGT00940000157824.i.a	ENSGT00550000074956	ENSGT00390000007529	ENSGT00940000166495	ENSGT00530000067736	ENSGT00940000177040	ENSGT00390000002789	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b.d	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Aplocheiloidei	ANCESTRAL SPECIES	81	ENSGT00940000158659	ENSGT00940000153408.B.s.b	ENSGT00940000157824.i.a	ENSGT00550000074956	ENSGT00390000007529	ENSGT00940000166495	ENSGT00940000179314	ENSGT00530000067736	ENSGT00390000002789	ENSGT00940000177040	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000180052	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Mangrove rivulus	MODERN SPECIES	271																GOT1 (ENSKMAG00000006315) ##22	CNNM1 (ENSKMAG00000006290) #23	hoga1 (ENSKMAG00000006254)	MORN4 (ENSKMAG00000006240) #36	ENSKMAG00000006202	slit1b (ENSKMAG00000006097)
Turquoise killifish	MODERN SPECIES	1617	ENSNFUG00015012876	MRPL45 (ENSNFUG00015012866)	npepps (ENSNFUG00015012030)	C11H6ORF120 (ENSNFUG00015011970)	mrpl21 (ENSNFUG00015011963)	ENSNFUG00015011456	ZGMRPL4 (ENSNFUG00015011372)	ccdc3b (ENSNFUG00015011363)	HYLS1 (ENSNFUG00015011348)	atpv0e2 (ENSNFUG00015011330)	CREBRF (ENSNFUG00015011320)	ENTPD7 (ENSNFUG00015011274) #19	ENSNFUG00015011257	SLC25A28 (ENSNFUG00015011246) #20	NKX2-3 (ENSNFUG00015011235) #21	GOT1 (ENSNFUG00015011190) ##22	CNNM1 (ENSNFUG00015011166) #23	hoga1 (ENSNFUG00015010952)	ENSNFUG00015010928	ENSNFUG00015010919	ENSNFUG00015010916	ENSNFUG00015010906	slit1b (ENSNFUG00015010091)	ENSNFUG00015009984	DLA (ENSNFUG00015009959)	ZBTB45 (ENSNFUG00015009939)	hk1 (ENSNFUG00015005439)	myom2a (ENSNFUG00015004624)	ENSNFUG00015004602	lgsn (ENSNFUG00015004590)	PTP4A1 (ENSNFUG00015004583)
Cyprinodontoidei	ANCESTRAL SPECIES	41	ENSGT00940000153408.B.s.b	ENSGT00940000157824.i.a	ENSGT00550000074956	ENSGT00390000007529	ENSGT00940000166495	ENSGT00530000067736	ENSGT00940000177040	ENSGT00390000002789	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b.d	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
NAME_4	ANCESTRAL SPECIES	74	ENSGT00940000158659	ENSGT00940000153408.B.s.b	ENSGT00940000157824.i.a	ENSGT00550000074956	ENSGT00390000007529	ENSGT00940000166495	ENSGT00530000067736	ENSGT00940000177040	ENSGT00390000002789	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b.d	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00940000180052	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Mummichog	MODERN SPECIES	2270	commd1 (ENSFHEG00000002285)	USP34 (ENSFHEG00000002359)	XPO1 (ENSFHEG00000002412)	FAM161A (ENSFHEG00000002424)	cct4 (ENSFHEG00000002454)	pus10 (ENSFHEG00000002475)	ENSFHEG00000002501	ifngr1 (ENSFHEG00000002503)	ENSFHEG00000002510	ltv1 (ENSFHEG00000002538)	atpv0e2 (ENSFHEG00000002546)	ENSFHEG00000002561	ENTPD7 (ENSFHEG00000002586) #19	slc25a28 (ENSFHEG00000002603) #20	ENSFHEG00000002607 #21	GOT1 (ENSFHEG00000002621) ##22	CNNM1 (ENSFHEG00000002668) #23	hoga1 (ENSFHEG00000002680)	ENSFHEG00000002684	ENSFHEG00000002691	ENSFHEG00000002734	slit1b (ENSFHEG00000002796)	ARHGAP19 (ENSFHEG00000002810)	ENSFHEG00000002822	dla (ENSFHEG00000002839)	ENSFHEG00000002870	hk1 (ENSFHEG00000002913)	myom2a (ENSFHEG00000003011)	ENSFHEG00000003030	lgsn (ENSFHEG00000003054)	ptp4a1 (ENSFHEG00000003076)
Sheepshead minnow	MODERN SPECIES	157	ENSCVAG00000000101	ENSCVAG00000003169	ENSCVAG00000003149	ENSCVAG00000003099	XCR1 (ENSCVAG00000003080)	ENSCVAG00000003076	ENSCVAG00000003059	ENSCVAG00000000742	ENSCVAG00000003039	ENSCVAG00000003029	atpv0e2 (ENSCVAG00000003019)	ENSCVAG00000003007	ENTPD7 (ENSCVAG00000002999) #19	slc25a28 (ENSCVAG00000002979) #20	ENSCVAG00000002952 #21	GOT1 (ENSCVAG00000002950) ##22	CNNM1 (ENSCVAG00000002925) #23	hoga1 (ENSCVAG00000002898)	ENSCVAG00000002887	ENSCVAG00000002883	ENSCVAG00000002875	slit1b (ENSCVAG00000002864)
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00940000153408.B.s.b	ENSGT00940000157824.i.a	ENSGT00550000074956	ENSGT00390000007529	ENSGT00940000166495	ENSGT00940000179314	ENSGT00530000067736	ENSGT00940000177040	ENSGT00390000002789	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Poecilia	ANCESTRAL SPECIES	6	ENSGT00940000153408.B.s.b	ENSGT00940000157824.i.a	ENSGT00550000074956	ENSGT00390000007529	ENSGT00940000166495	ENSGT00940000179314	ENSGT00530000067736	ENSGT00390000002789	ENSGT00940000177040	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
NAME_6	ANCESTRAL SPECIES	278							ENSGT00530000067736	ENSGT00390000002789	ENSGT00940000177040	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b
Sailfin molly	MODERN SPECIES	304							ifngr1 (ENSPLAG00000022526)	ltv1 (ENSPLAG00000022522)	ENSPLAG00000000476	ENSPLAG00000022455	atpv0e2 (ENSPLAG00000022437)	ENSPLAG00000022424	ENTPD7 (ENSPLAG00000022413) #19	slc25a28 (ENSPLAG00000022373) #20	NKX2-3 (ENSPLAG00000022341) #21	GOT1 (ENSPLAG00000022323) ##22	CNNM1 (ENSPLAG00000022295) #23	hoga1 (ENSPLAG00000022226)	MORN4 (ENSPLAG00000022204) #36
Amazon molly	MODERN SPECIES	638								ENSPFOG00000024754	ifngr1 (ENSPFOG00000009105)	ltv1 (ENSPFOG00000009122)	ENSPFOG00000009234	ENSPFOG00000023708	ENTPD7 (ENSPFOG00000009283) #19	slc25a28 (ENSPFOG00000009401) #20	ENSPFOG00000009440 #21	GOT1 (ENSPFOG00000009462) ##22	CNNM1 (ENSPFOG00000009603) #23	hoga1 (ENSPFOG00000009760)	MORN4 (ENSPFOG00000009871) #36	ENSPFOG00000009902	slit1b (ENSPFOG00000010003)	ENSPFOG00000010443	RHOU (ENSPFOG00000010445)	dla (ENSPFOG00000010460)
Guppy	MODERN SPECIES	439	XPO1 (ENSPREG00000020796)	FAM161A (ENSPREG00000020846)	cct4 (ENSPREG00000020867)	pus10 (ENSPREG00000020908)	ENSPREG00000020952	ENSPREG00000020980	ifngr1 (ENSPREG00000020996)	ltv1 (ENSPREG00000021028)	ENSPREG00000021067	ENSPREG00000021081	atpv0e2 (ENSPREG00000021108)	ENSPREG00000021136	ENTPD7 (ENSPREG00000021157) #19	slc25a28 (ENSPREG00000021174) #20	ENSPREG00000021187 #21	GOT1 (ENSPREG00000021211) ##22	CNNM1 (ENSPREG00000021245) #23	hoga1 (ENSPREG00000021261)	MORN4 (ENSPREG00000021271) #36	ENSPREG00000021280	ENSPREG00000021295	slit1b (ENSPREG00000021322)	ARHGAP19 (ENSPREG00000021370)	ENSPREG00000021405	dla (ENSPREG00000021420)	ENSPREG00000021438	hk1 (ENSPREG00000021465)	myom2a (ENSPREG00000021506)	ENSPREG00000021538	lgsn (ENSPREG00000021552)	ptp4a1 (ENSPREG00000021559)
Platyfish	MODERN SPECIES	19	XPO1 (ENSXMAG00000005790)	FAM161A (ENSXMAG00000005787)	cct4 (ENSXMAG00000005750)	pus10 (ENSXMAG00000005729)	ENSXMAG00000016020	ENSXMAG00000028107	ifngr1 (ENSXMAG00000005709)	ENSXMAG00000029535	ltv1 (ENSXMAG00000029822)	ENSXMAG00000005708	atpv0e2 (ENSXMAG00000027815)	ENSXMAG00000021763	ENTPD7 (ENSXMAG00000005683) #19	slc25a28 (ENSXMAG00000005681) #20	NKX2-3 (ENSXMAG00000022448) #21	GOT1 (ENSXMAG00000005669) ##22	CNNM1 (ENSXMAG00000005657) #23	hoga1 (ENSXMAG00000005650)	MORN4 (ENSXMAG00000005648) #36	ENSXMAG00000027531	slit1b (ENSXMAG00000014475)	ENSXMAG00000014472	ENSXMAG00000030012	dla (ENSXMAG00000014461)	ENSXMAG00000014452	hk1 (ENSXMAG00000008211)	myom2a (ENSXMAG00000014415)	ENSXMAG00000014414	lgsn (ENSXMAG00000014412)	ptp4a1 (ENSXMAG00000014405)	col9a1a (ENSXMAG00000014357)
Oryzias	ANCESTRAL SPECIES	34	ENSGT00390000008711.h	ENSGT01100000263483.E.b.b	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT01070000253760.b.a.a.a.b.a.a.a.b.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Oryzias_b	ANCESTRAL SPECIES	36	ENSGT00390000008711.h	ENSGT01100000263483.E.b.b.u	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT01070000253760.b.a.a.a.b.a.a.a.b.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406	ENSGT00940000157935.a	ENSGT01030000237709
Indian medaka	MODERN SPECIES	21	ENSOMEG00000012007	ENSOMEG00000011970	ENSOMEG00000011938	tmx2b (ENSOMEG00000011893)	zdhhc5a (ENSOMEG00000011842)	slc43a1b (ENSOMEG00000000831)	ENSOMEG00000011794	ENSOMEG00000011745	p2rx3b (ENSOMEG00000011735)	ENSOMEG00000011724	atpv0e2 (ENSOMEG00000011709)	ENSOMEG00000011680	ENTPD7 (ENSOMEG00000011604) #19	slc25a28 (ENSOMEG00000011564) #20	NKX2-3 (ENSOMEG00000011553) #21	GOT1 (ENSOMEG00000011541) ##22	CNNM1 (ENSOMEG00000011514) #23	hoga1 (ENSOMEG00000011497)	MORN4 (ENSOMEG00000011473) #36	ENSOMEG00000011452	ENSOMEG00000011408	ARHGAP19 (ENSOMEG00000011381)	ENSOMEG00000011304	dla (ENSOMEG00000011280)	ENSOMEG00000011246	hk1 (ENSOMEG00000011203)	myom2a (ENSOMEG00000000267)	ENSOMEG00000010956	lgsn (ENSOMEG00000010937)	ptp4a1 (ENSOMEG00000010915)	ENSOMEG00000010888
Javanese ricefish	MODERN SPECIES		ENSOJAG00000003437	ENSOJAG00000003385	TESK1 (ENSOJAG00000003257)	tmx2b (ENSOJAG00000003235)	slc43a1b (ENSOJAG00000003198)	ENSOJAG00000002651	pold4 (ENSOJAG00000002520)	p2rx3b (ENSOJAG00000002428)	ENSOJAG00000002411	atpv0e2 (ENSOJAG00000002403)	ENSOJAG00000002391	ENSOJAG00000002382	ENTPD7 (ENSOJAG00000002194) #19	slc25a28 (ENSOJAG00000002173) #20	NKX2-3 (ENSOJAG00000002162) #21	GOT1 (ENSOJAG00000002129) ##22	CNNM1 (ENSOJAG00000002100) #23	hoga1 (ENSOJAG00000002081)	ENSOJAG00000002057	ENSOJAG00000002037	ARHGAP19 (ENSOJAG00000001434)	ENSOJAG00000001428	dla (ENSOJAG00000001417)	ENSOJAG00000001408	ENSOJAG00000001402	hk1 (ENSOJAG00000000858)	ENSOJAG00000000571	lgsn (ENSOJAG00000000560)	ptp4a1 (ENSOJAG00000000548)	ENSOJAG00000000536	EOLA1 (ENSOJAG00000000510)
Oryzias_a	ANCESTRAL SPECIES	59	ENSGT00390000013973.A.a.c.b.a	ENSGT00390000008711.h	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT01070000253760.b.a.a.a.b.a.a.a.b.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Chinese medaka	MODERN SPECIES	1299															NKX2-3 (ENSOSIG00000023633) #21	GOT1 (ENSOSIG00000023631) ##22
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000023088	ENSORLG00000028506	ENSORLG00000000870	ENSORLG00000028817	ENSORLG00000022956	ENSORLG00000025490	ENSORLG00000028345	ENSORLG00000023024	ENSORLG00000000170	ENSORLG00000026321	atpv0e2 (ENSORLG00000021962)	ENSORLG00000027950	ENTPD7 (ENSORLG00000000027) #19	SLC25A28 (ENSORLG00000023276) #20	NKX2-3 (ENSORLG00000024332) #21	GOT1 (ENSORLG00000000031) ##22	CNNM1 (ENSORLG00000000036) #23	hoga1 (ENSORLG00000000039)	ENSORLG00000000043 #36	ENSORLG00000000044	ENSORLG00000027792	ENSORLG00000027690	ENSORLG00000000055	ARHGAP19 (ENSORLG00000000062)	ENSORLG00000000064	dla (ENSORLG00000027625)	ENSORLG00000026423	HK1 (ENSORLG00000000069)	myom2a (ENSORLG00000000075)	ENSORLG00000000078	lgsn (ENSORLG00000000080)
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Pomacentridae	ANCESTRAL SPECIES	67									ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Pomacentridae_A	ANCESTRAL SPECIES	151									ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a.c	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	790									ENSAPOG00000008424	ENSAPOG00000001034	atpv0e2 (ENSAPOG00000008459)	ENSAPOG00000008503	ENTPD7 (ENSAPOG00000008613) #19	slc25a28 (ENSAPOG00000008627) #20	NKX2-3 (ENSAPOG00000008652) #21	GOT1 (ENSAPOG00000008700) ##22	CNNM1 (ENSAPOG00000008709) #23
Spiny chromis	MODERN SPECIES	4153																ENSAPOG00000018261 ##22
Amphiprion	ANCESTRAL SPECIES										ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.b.b.a	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a.c	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.a.b	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Clown anemonefish	MODERN SPECIES	1931																GOT1 (ENSAOCG00000019381) ##22	CNNM1 (ENSAOCG00000001402) #23	hoga1 (ENSAOCG00000001398)	gldc (ENSAOCG00000002175)	MBOAT4 (ENSAOCG00000019156)	coq2 (ENSAOCG00000019116)	ENSAOCG00000019079	mfsd10 (ENSAOCG00000019068)	ENSAOCG00000019052	prlrb (ENSAOCG00000019008)	MALT1 (ENSAOCG00000018977)	emb (ENSAOCG00000018936)	mrps30 (ENSAOCG00000018917)	hint2 (ENSAOCG00000018892)	ENSAOCG00000018833	ENSAOCG00000018805
Orange clownfish	MODERN SPECIES	17	ENSAPEG00000008978	ENSAPEG00000009117	ENSAPEG00000009288	ENSAPEG00000009324	ENSAPEG00000009448	ENSAPEG00000009594	ENSAPEG00000009706	ENSAPEG00000009727	ENSAPEG00000009860	ENSAPEG00000009897	atpv0e2 (ENSAPEG00000009922)	ENSAPEG00000009939	ENTPD7 (ENSAPEG00000009967) #19	slc25a28 (ENSAPEG00000010021) #20	NKX2-3 (ENSAPEG00000010041) #21	GOT1 (ENSAPEG00000010068) ##22	CNNM1 (ENSAPEG00000010118) #23	hoga1 (ENSAPEG00000010201)	MORN4 (ENSAPEG00000010232) #36	ENSAPEG00000010248	ENSAPEG00000010271	slit1b (ENSAPEG00000010303)	ARHGAP19 (ENSAPEG00000010451)	ENSAPEG00000010539	RHOU (ENSAPEG00000010570)	dla (ENSAPEG00000010614)	ENSAPEG00000010678	hk1 (ENSAPEG00000010727)	myom2a (ENSAPEG00000010774)	ENSAPEG00000010819	lgsn (ENSAPEG00000010837)
Bicolor damselfish	MODERN SPECIES	2239													ENTPD7 (ENSSPAG00000020024) #19	slc25a28 (ENSSPAG00000020016) #20	NKX2-3 (ENSSPAG00000020008) #21	GOT1 (ENSSPAG00000019993) ##22
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a.a.a.a.b	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a.a.a.a.b	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a.a.a.a.a.a	ENSGT00990000203852.a.a.b	ENSGT00990000203852.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	33	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Haplochromini	ANCESTRAL SPECIES	45	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e.c	ENSGT00940000157889.g.b	ENSGT00390000013639
Burton s mouthbrooder	MODERN SPECIES	546					ENSHBUG00000016894	ENSHBUG00000016855	ENSHBUG00000016827	ENSHBUG00000016759	ENSHBUG00000016738	ENSHBUG00000016720	atpv0e2 (ENSHBUG00000016705)	ENSHBUG00000016686	ENTPD7 (ENSHBUG00000001004) #19	slc25a28 (ENSHBUG00000016611) #20	ENSHBUG00000016604 #21	GOT1 (ENSHBUG00000016598) ##22	CNNM1 (ENSHBUG00000001140) #23	hoga1 (ENSHBUG00000016549)	ENSHBUG00000016469	MORN4 (ENSHBUG00000016465) #36	ENSHBUG00000016442	slit1b (ENSHBUG00000016427)	ARHGAP19 (ENSHBUG00000016400)	ENSHBUG00000016386	dla (ENSHBUG00000016370)	ENSHBUG00000016325	hk1 (ENSHBUG00000016275)	myom2a (ENSHBUG00000016197)	lgsn (ENSHBUG00000016181)	ptp4a1 (ENSHBUG00000016172)	col9a1a (ENSHBUG00000016144)
Haplochromini_A	ANCESTRAL SPECIES	50	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000170319	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e.c	ENSGT00940000157889.g.b	ENSGT00390000013639
Haplochromini_B	ANCESTRAL SPECIES	93		ENSGT00390000013764.ab.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.a.b.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT00980000198884.e.a	ENSGT01030000234576.D.a.b.a.a.a.b.c.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e.c	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406	ENSGT00940000157935.a
Zebra mbuna	MODERN SPECIES	1109	ENSMZEG00005014843	ENSMZEG00005014834	ENSMZEG00005014819	ENSMZEG00005014815	ENSMZEG00005014782	ENSMZEG00005014776	ENSMZEG00005014770	ENSMZEG00005014762	ENSMZEG00005014750	ENSMZEG00005014740	atpv0e2 (ENSMZEG00005014731)	ENSMZEG00005014712	ENTPD7 (ENSMZEG00005014689) #19	slc25a28 (ENSMZEG00005014676) #20	ENSMZEG00005014660 #21	GOT1 (ENSMZEG00005014631) ##22	CNNM1 (ENSMZEG00005014619) #23	ENSMZEG00005014604	hoga1 (ENSMZEG00005014595)	MORN4 (ENSMZEG00005014565) #36	ENSMZEG00005014560	slit1b (ENSMZEG00005014549)	ENSMZEG00005014534	man2b1 (ENSMZEG00005014523)	TRMT1 (ENSMZEG00005014510)	NACC1 (ENSMZEG00005014477)	stx10 (ENSMZEG00005014469)	ier2b (ENSMZEG00005014461)	cacna1ab (ENSMZEG00005014424)	wdr83os (ENSMZEG00005014409)	wdr83 (ENSMZEG00005014388)
Eastern happy	MODERN SPECIES	18	ENSACLG00000012526	ENSACLG00000012490	ENSACLG00000012482	ENSACLG00000012475	ENSACLG00000012471	ENSACLG00000012449	ENSACLG00000012421	ENSACLG00000012414	ENSACLG00000012384	ENSACLG00000012346	atpv0e2 (ENSACLG00000012310)	ENSACLG00000012247	ENTPD7 (ENSACLG00000012169) #19	slc25a28 (ENSACLG00000012120) #20	ENSACLG00000012108 #21	GOT1 (ENSACLG00000012047) ##22	CNNM1 (ENSACLG00000012030) #23	ENSACLG00000012019	hoga1 (ENSACLG00000011903)	MORN4 (ENSACLG00000011891) #36	ENSACLG00000011857	slit1b (ENSACLG00000011523)	ARHGAP19 (ENSACLG00000011516)	ENSACLG00000011506	dla (ENSACLG00000011496)	ENSACLG00000011491	hk1 (ENSACLG00000011311)	myom2a (ENSACLG00000011219)	ENSACLG00000011207	lgsn (ENSACLG00000011199)	ptp4a1 (ENSACLG00000011171)
P. nyererei	MODERN SPECIES	545						ENSPNYG00000023286	ENSPNYG00000023292	ENSPNYG00000023297	ENSPNYG00000023300	ENSPNYG00000023304	atpv0e2 (ENSPNYG00000023307)	ENSPNYG00000023311	ENTPD7 (ENSPNYG00000023316) #19	slc25a28 (ENSPNYG00000023323) #20	ENSPNYG00000023327 #21	GOT1 (ENSPNYG00000000824) ##22	CNNM1 (ENSPNYG00000000875) #23	hoga1 (ENSPNYG00000000964)	MORN4 (ENSPNYG00000000991) #36	ENSPNYG00000001023	ENSPNYG00000001040	ENSPNYG00000001049	ENSPNYG00000001078	ARHGAP19 (ENSPNYG00000001117)	ENSPNYG00000001159	dla (ENSPNYG00000001178)	ENSPNYG00000001220	hk1 (ENSPNYG00000001261)	myom2a (ENSPNYG00000001345)	lgsn (ENSPNYG00000001618)	ptp4a1 (ENSPNYG00000001652)
Lyretail cichlid	MODERN SPECIES	443									ENSNBRG00000006833	ENSNBRG00000006809	atpv0e2 (ENSNBRG00000006796)	ENSNBRG00000006788	ENTPD7 (ENSNBRG00000006756) #19	slc25a28 (ENSNBRG00000006726) #20	NKX2-3 (ENSNBRG00000006711) #21	GOT1 (ENSNBRG00000006678) ##22	CNNM1 (ENSNBRG00000006620) #23	hoga1 (ENSNBRG00000006578)	ENSNBRG00000006555	ENSNBRG00000006539	slit1b (ENSNBRG00000005548)	ARHGAP19 (ENSNBRG00000005483)	RHOU (ENSNBRG00000005470)	dla (ENSNBRG00000005342)	ENSNBRG00000005305	hk1 (ENSNBRG00000005272)	myom2a (ENSNBRG00000004940)	ENSNBRG00000004865	lgsn (ENSNBRG00000004858)	ptp4a1 (ENSNBRG00000004831)	ENSNBRG00000004814
Nile tilapia	MODERN SPECIES	18	ENSONIG00000030067	ENSONIG00000031539	ENSONIG00000034419	ENSONIG00000029800	ENSONIG00000035635	ENSONIG00000035631	ENSONIG00000033100	ENSONIG00000040357	ENSONIG00000000299	ENSONIG00000000297	atpv0e2 (ENSONIG00000038259)	ENSONIG00000000294	ENTPD7 (ENSONIG00000000286) #19	slc25a28 (ENSONIG00000000285) #20	ENSONIG00000033805 #21	GOT1 (ENSONIG00000000268) ##22	CNNM1 (ENSONIG00000000264) #23	ENSONIG00000040013	hoga1 (ENSONIG00000000262)	MORN4 (ENSONIG00000000257) #36	ENSONIG00000037769	ENSONIG00000000255	ENSONIG00000035807	slit1b (ENSONIG00000000202)	ARHGAP19 (ENSONIG00000032271)	ENSONIG00000000197	dla (ENSONIG00000000194)	ENSONIG00000031890	ENSONIG00000036388	hk1 (ENSONIG00000000186)	myom2a (ENSONIG00000000159)
Midas cichlid	MODERN SPECIES	119												atpv0e2 (ENSACIG00000020077)	ENTPD7 (ENSACIG00000020089) #19	slc25a28 (ENSACIG00000020125) #20	ENSACIG00000020288 #21	GOT1 (ENSACIG00000020304) ##22	CNNM1 (ENSACIG00000020322) #23	hoga1 (ENSACIG00000020356)	ENSACIG00000020373	ENSACIG00000020394	ENSACIG00000020408	slit1b (ENSACIG00000020470)
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a	ENSGT00990000203852	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000168493	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a	ENSGT00990000203852	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000168493	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Ballan wrasse	MODERN SPECIES	465						ENSLBEG00000013793	ENSLBEG00000013720	crb3b (ENSLBEG00000013699)	c3b.2 (ENSLBEG00000013581)	ENSLBEG00000013518	atpv0e2 (ENSLBEG00000013498)	ENSLBEG00000013442	ENTPD7 (ENSLBEG00000013358) #19	slc25a28 (ENSLBEG00000013312) #20	NKX2-3 (ENSLBEG00000013270) #21	GOT1 (ENSLBEG00000013202) ##22	CNNM1 (ENSLBEG00000013164) #23	hoga1 (ENSLBEG00000013133)	MORN4 (ENSLBEG00000013102) #36
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b.c.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a.f	ENSGT00990000203852	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000168493	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b
Perciformes	ANCESTRAL SPECIES	2	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00940000168493	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00980000198884	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b
Cottioidei	ANCESTRAL SPECIES	40	ENSGT00940000159327.u.b	ENSGT00940000166436	ENSGT00900000141021.b.b.f	ENSGT00940000156518.A	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00940000177979	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00940000156644.e.a	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406	ENSGT00940000157935.a	ENSGT00390000014512	ENSGT00940000164531
Lumpfish	MODERN SPECIES		yju2b (ENSCLMG00005010376)	ENSCLMG00005010375	c3b.2 (ENSCLMG00005010374)	ENSCLMG00005010373	ENSCLMG00005010372	ENSCLMG00005010371	ENSCLMG00005010370	ENSCLMG00005010367	ENSCLMG00005010363	ENSCLMG00005010360	atpv0e2 (ENSCLMG00005010358)	ENTPD7 (ENSCLMG00005009896) #19	SLC25A28 (ENSCLMG00005009893) #20	NKX2-3 (ENSCLMG00005009891) #21	ENSCLMG00005009890	GOT1 (ENSCLMG00005009878) ##22	CNNM1 (ENSCLMG00005009877) #23	hoga1 (ENSCLMG00005009876)	ENSCLMG00005009875	ENSCLMG00005009871	slit1b (ENSCLMG00005007864)	ARHGAP19 (ENSCLMG00005007827)	ENSCLMG00005007826	ENSCLMG00005007822	ENSCLMG00005003322	myom2a (ENSCLMG00005002326)	ENSCLMG00005002321	lgsn (ENSCLMG00005002320)	ENSCLMG00005002319	ENSCLMG00005002317	ENSCLMG00005002316
Stickleback	MODERN SPECIES	360																GOT1 (ENSGACG00000000254) ##22	CNNM1 (ENSGACG00000000245) #23
Perciformes_a	ANCESTRAL SPECIES		ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b.d	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00940000168493	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Pike perch	MODERN SPECIES	151						ENSSLUG00000018665	ENSSLUG00000018656	ENSSLUG00000018636	ENSSLUG00000018630	ENSSLUG00000018624	atpv0e2 (ENSSLUG00000018619)	ENSSLUG00000018615	ENTPD7 (ENSSLUG00000018103) #19	slc25a28 (ENSSLUG00000018068) #20	ENSSLUG00000018067 #21	GOT1 (ENSSLUG00000018061) ##22	CNNM1 (ENSSLUG00000018055) #23	hoga1 (ENSSLUG00000018050)	ENSSLUG00000018044	ENSSLUG00000018040	ENSSLUG00000018035	slit1b (ENSSLUG00000017676)	ARHGAP19 (ENSSLUG00000017387)	ENSSLUG00000017371	ENSSLUG00000017362	ENSSLUG00000017356	ENSSLUG00000017349	dla (ENSSLUG00000017336)	ENSSLUG00000017331	hk1 (ENSSLUG00000017014)	myom2a (ENSSLUG00000014845)
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00940000156518.A	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.b	ENSGT00990000203852	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406	ENSGT00940000157935.a
European seabass	MODERN SPECIES	20	ENSDLAG00005028918	ENSDLAG00005029267	ENSDLAG00005006861	ugp2a (ENSDLAG00005006357)	VPS54 (ENSDLAG00005006511)	ENSDLAG00005006165	otx2a (ENSDLAG00005006154)	ENSDLAG00005034687	ENSDLAG00005030008	ENSDLAG00005011667	b3gnt2a (ENSDLAG00005032538)	commd1 (ENSDLAG00005033691)	ENSDLAG00005005654	ENSDLAG00005005184	ENSDLAG00005004960	ENSDLAG00005004902 ##22	ENSDLAG00005004880 #23	hoga1 (ENSDLAG00005004866)	ENSDLAG00005031665 #36	ENSDLAG00005032028	slit1b (ENSDLAG00005001600)	ENSDLAG00005001355	ENSDLAG00005017832	ENSDLAG00005020174	ENSDLAG00005017662	ENSDLAG00005022238	ENSDLAG00005022146	ENSDLAG00005022130	myom2a (ENSDLAG00005020729)	ENSDLAG00005020677	lgsn (ENSDLAG00005020670)
Large yellow croaker	MODERN SPECIES	481	yju2b (ENSLCRG00005023112)	c3b.2 (ENSLCRG00005023115)	ENSLCRG00005023117	ENSLCRG00005023121	ENSLCRG00005023123	ENSLCRG00005023127	ENSLCRG00005023129	ENSLCRG00005023133	ENSLCRG00005023134	ENSLCRG00005023137	atpv0e2 (ENSLCRG00005023138)	ENSLCRG00005023140	ENTPD7 (ENSLCRG00005023168) #19	slc25a28 (ENSLCRG00005023325) #20	ENSLCRG00005023326 #21	GOT1 (ENSLCRG00005023329) ##22	CNNM1 (ENSLCRG00005023342) #23	hoga1 (ENSLCRG00005023344)	MORN4 (ENSLCRG00005023346) #36	ENSLCRG00005023347	slit1b (ENSLCRG00005002787)	ARHGAP19 (ENSLCRG00005010166)	ENSLCRG00005010172	RHOU (ENSLCRG00005010174)	dla (ENSLCRG00005010176)	ENSLCRG00005010180	myom2a (ENSLCRG00005010193)	hk1 (ENSLCRG00005010263)	ENSLCRG00005014303	ENSLCRG00005014304	lgsn (ENSLCRG00005014305)
Gilthead seabream	MODERN SPECIES		ENSSAUG00010000045	ENSSAUG00010000044	ENSSAUG00010000042	ENSSAUG00010000040	ENSSAUG00010000038	ENSSAUG00010017926	ENSSAUG00010017923	ENSSAUG00010017920	ENSSAUG00010017917	ENSSAUG00010017914	ENSSAUG00010017906	atpv0e2 (ENSSAUG00010017902)	ENSSAUG00010017898	ENTPD7 (ENSSAUG00010017741) #19	NKX2-3 (ENSSAUG00010017737) #21	GOT1 (ENSSAUG00010017731) ##22	CNNM1 (ENSSAUG00010017726) #23	hoga1 (ENSSAUG00010017723)	ENSSAUG00010017720	ENSSAUG00010017717	MORN4 (ENSSAUG00010017715) #36	slit1b (ENSSAUG00010013502)	ARHGAP19 (ENSSAUG00010013459)	nipal4 (ENSSAUG00010013441)	ENSSAUG00010013438	ENSSAUG00010013436	ENSSAUG00010013435	ENSSAUG00010013433	ENSSAUG00010013428	ENSSAUG00010013426	ENSSAUG00010013424
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00900000141021.b.b.f	ENSGT00940000156518.A	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639
Anabantoidei	ANCESTRAL SPECIES		ENSGT00940000166436	ENSGT00900000141021.b.b.f	ENSGT00940000156518.A	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406	ENSGT00940000157935.a
Climbing perch	MODERN SPECIES		ENSATEG00000000348	ENSATEG00000000209	ENSATEG00000000771	ENSATEG00000025955	ENSATEG00000000188	ENSATEG00000000027	ENSATEG00000000496	ENSATEG00000001122	ENSATEG00000022174	ENSATEG00000022160	atpv0e2 (ENSATEG00000022155)	ENSATEG00000022142	ENTPD7 (ENSATEG00000025313) #19	SLC25A28 (ENSATEG00000022106) #20	NKX2-3 (ENSATEG00000022096) #21	GOT1 (ENSATEG00000022085) ##22	CNNM1 (ENSATEG00000022052) #23	hoga1 (ENSATEG00000022037)	ENSATEG00000022028 #36	ENSATEG00000022021	slit1b (ENSATEG00000021971)	ENSATEG00000021938	ENSATEG00000021914	ENSATEG00000021898	ENSATEG00000021885	ENSATEG00000021862	ENSATEG00000021839	myom2a (ENSATEG00000021776)	ENSATEG00000021763	lgsn (ENSATEG00000021753)	ptp4a1 (ENSATEG00000021743)
Siamese fighting fish	MODERN SPECIES		ENSBSLG00000008202	wdr83 (ENSBSLG00000008143)	ENSBSLG00000008135	ENSBSLG00000008132	yju2b (ENSBSLG00000008118)	c3b.2 (ENSBSLG00000007904)	ENSBSLG00000007848	ENSBSLG00000007863	ENSBSLG00000007772	ENSBSLG00000007733	atpv0e2 (ENSBSLG00000007148)	ENSBSLG00000007135	ENTPD7 (ENSBSLG00000007064) #19	slc25a28 (ENSBSLG00000007054) #20	NKX2-3 (ENSBSLG00000007044) #21	GOT1 (ENSBSLG00000006808) ##22	CNNM1 (ENSBSLG00000006707) #23	hoga1 (ENSBSLG00000006434)	MORN4 (ENSBSLG00000006339) #36	ENSBSLG00000006317	slit1b (ENSBSLG00000005052)	ENSBSLG00000004956	ENSBSLG00000007551	dla (ENSBSLG00000007537)	ENSBSLG00000007532	hk1 (ENSBSLG00000006755)	myom2a (ENSBSLG00000005201)	ENSBSLG00000005104	lgsn (ENSBSLG00000005047)	ptp4a1 (ENSBSLG00000004953)	ENSBSLG00000004910
Zig-zag eel	MODERN SPECIES		ENSMAMG00000026924	ENSMAMG00000002198	ENSMAMG00000024926	ENSMAMG00000002332	ENSMAMG00000002242	ENSMAMG00000002345	ENSMAMG00000002278	ENSMAMG00000003537	ENSMAMG00000002460	ENSMAMG00000025764	ENSMAMG00000002408	atpv0e2 (ENSMAMG00000027104)	ENSMAMG00000002778	ENSMAMG00000002678 #19	ENSMAMG00000002819 #21	ENSMAMG00000002834 ##22	ENSMAMG00000002885 #23	hoga1 (ENSMAMG00000002982)	ENSMAMG00000003013 #36	ENSMAMG00000003048	ENSMAMG00000003066	slit1b (ENSMAMG00000003079)	ENSMAMG00000003158	ENSMAMG00000003461	ENSMAMG00000026370	ENSMAMG00000003346	ENSMAMG00000026171	ENSMAMG00000003468	ENSMAMG00000003394	ENSMAMG00000003221	ENSMAMG00000025111
Carangaria	ANCESTRAL SPECIES		ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00990000203852	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Carangaria_A	ANCESTRAL SPECIES	14	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00990000203852	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Seriola	ANCESTRAL SPECIES	154									ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c.a #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #36	ENSGT00530000063604.A	ENSGT00940000157525.a #23
Greater amberjack	MODERN SPECIES	156									ENSSDUG00000014045	ENSSDUG00000014026	atpv0e2 (ENSSDUG00000014014)	ENSSDUG00000014002	ENTPD7 (ENSSDUG00000013958) #19	slc25a28 (ENSSDUG00000013940) #20	ENSSDUG00000013901 #21	GOT1 (ENSSDUG00000013881) ##22	ARHGAP19 (ENSSDUG00000013857)	slit1b (ENSSDUG00000013813)	ENSSDUG00000013796	ENSSDUG00000013787	MORN4 (ENSSDUG00000013760) #36	hoga1 (ENSSDUG00000013736)	CNNM1 (ENSSDUG00000013708) #23	ENSSDUG00000013687	ENSSDUG00000013679	ENSSDUG00000013671	ptp4a1 (ENSSDUG00000013652)	lgsn (ENSSDUG00000013633)	ENSSDUG00000013627	myom2a (ENSSDUG00000013571)	hk1 (ENSSDUG00000013507)
Yellowtail amberjack	MODERN SPECIES	2775													ENTPD7 (ENSSLDG00000012644) #19	slc25a28 (ENSSLDG00000012721) #20	ENSSLDG00000012749 #21	GOT1 (ENSSLDG00000012764) ##22
Barramundi perch	MODERN SPECIES	167	gtf3aa (ENSLCAG00010017366)	yju2b (ENSLCAG00010017369)	c3b.2 (ENSLCAG00010017407)	ENSLCAG00010017505	ENSLCAG00010017524	ENSLCAG00010017537	ENSLCAG00010017543	ENSLCAG00010017553	ENSLCAG00010017571	ENSLCAG00010017594	atpv0e2 (ENSLCAG00010017603)	ENSLCAG00010017607	ENTPD7 (ENSLCAG00010017632) #19	slc25a28 (ENSLCAG00010017778) #20	NKX2-3 (ENSLCAG00010017780) #21	GOT1 (ENSLCAG00010017785) ##22	CNNM1 (ENSLCAG00010017811) #23	hoga1 (ENSLCAG00010017823)	MORN4 (ENSLCAG00010017826) #36	ENSLCAG00010017832	slit1b (ENSLCAG00010017878)	ARHGAP19 (ENSLCAG00010017975)	ENSLCAG00010017979	ENSLCAG00010017981	dla (ENSLCAG00010017982)	ENSLCAG00010017985	hk1 (ENSLCAG00010018183)	myom2a (ENSLCAG00010019470)	ENSLCAG00010019958	lgsn (ENSLCAG00010019964)	ptp4a1 (ENSLCAG00010019972)
Pleuronectoidei	ANCESTRAL SPECIES	26	ENSGT00900000141021.b.b.f	ENSGT00940000156518.A	ENSGT00390000002121	ENSGT00940000159016	ENSGT00950000182993.B.b	ENSGT00940000155647.bb	ENSGT00530000063615.b	ENSGT00940000154063.C.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00940000156644.e.a	ENSGT00940000159781.b	ENSGT00940000160859	ENSGT00950000182787.A.a	ENSGT00940000157057.e	ENSGT00940000157889.g.b	ENSGT00390000013639	ENSGT00940000154406
Tongue sole	MODERN SPECIES	19	ier2b (ENSCSEG00000020767)	cacna1ab (ENSCSEG00000020769)	wdr83os (ENSCSEG00000020788)	wdr83 (ENSCSEG00000020790)	ENSCSEG00000020795	GTF3A (ENSCSEG00000020796)	c3b.2 (ENSCSEG00000020797)	ENSCSEG00000020803	ENSCSEG00000020807	atpv0e2 (ENSCSEG00000020814)	ENSCSEG00000020816	ENTPD7 (ENSCSEG00000020819) #19	slc25a28 (ENSCSEG00000020821) #20	NKX2-3 (ENSCSEG00000020822) #21	ENSCSEG00000020823	GOT1 (ENSCSEG00000020824) ##22	ENSCSEG00000020826	CNNM1 (ENSCSEG00000020827) #23	hoga1 (ENSCSEG00000020828)	MORN4 (ENSCSEG00000020829) #36	ENSCSEG00000020830	ENSCSEG00000020831	ENSCSEG00000020832	ncf4 (ENSCSEG00000020833)	pvalb7 (ENSCSEG00000020834)	baiap2l2b (ENSCSEG00000020835)	ENSCSEG00000020836	dnal4b (ENSCSEG00000020837)	nptxrb (ENSCSEG00000020838)	pla2g6 (ENSCSEG00000020839)	cbx6a (ENSCSEG00000020840)
Turbot	MODERN SPECIES	20	wdr83 (ENSSMAG00000021130)	ENSSMAG00000025695	ENSSMAG00000021129	yju2b (ENSSMAG00000021128)	c3b.2 (ENSSMAG00000021126)	ENSSMAG00000035482	ENSSMAG00000033985	ENSSMAG00000021125	ENSSMAG00000021124	ENSSMAG00000021096	ENSSMAG00000037881	ENSSMAG00000021098	ENTPD7 (ENSSMAG00000021099) #19	SLC25A28 (ENSSMAG00000021100) #20	NKX2-3 (ENSSMAG00000021102) #21	GOT1 (ENSSMAG00000021101) ##22	CNNM1 (ENSSMAG00000021103) #23	hoga1 (ENSSMAG00000035315)	ENSSMAG00000032297	ENSSMAG00000035022	ENSSMAG00000021106	slit1b (ENSSMAG00000021107)	ENSSMAG00000021108	ENSSMAG00000030106	ENSSMAG00000021110	ENSSMAG00000021111	ENSSMAG00000021112	myom2a (ENSSMAG00000021113)	ENSSMAG00000021114	lgsn (ENSSMAG00000021115)	ptp4a1 (ENSSMAG00000021116)
Cod	MODERN SPECIES	16	ENSGMOG00000034303	SYNGR1 (ENSGMOG00000023049)	ENSGMOG00000034653	MGAT3 (ENSGMOG00000031946)	ENSGMOG00000018034	ENSGMOG00000029587	ENSGMOG00000018077	ENSGMOG00000026993	ENSGMOG00000018057	atf4a (ENSGMOG00000026369)	atpv0e2 (ENSGMOG00000024703)	ENSGMOG00000011963	ENTPD7 (ENSGMOG00000011954) #19	SLC25A28 (ENSGMOG00000028850) #20	NKX2-3 (ENSGMOG00000023385) #21	GOT1 (ENSGMOG00000011935) ##22	CNNM1 (ENSGMOG00000018366) #23	hoga1 (ENSGMOG00000024220)	ENSGMOG00000034450	ENSGMOG00000011889	ENSGMOG00000031324	ENSGMOG00000027132	slit1b (ENSGMOG00000024684)	ENSGMOG00000000581	ENSGMOG00000027990	ENSGMOG00000030643	tacr3l (ENSGMOG00000007290)	ENSGMOG00000007281	cldnd1b (ENSGMOG00000024776)	TBC1D9 (ENSGMOG00000003147)	ENSGMOG00000033809
Protacanthopterygii	ANCESTRAL SPECIES	59	ENSGT00950000182935.B.b.c.g	ENSGT00870000136549	ENSGT01050000244893.c.a.b.j	ENSGT00510000048276	ENSGT00390000008221.a	ENSGT00940000160104	ENSGT00510000049239.a.d	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00530000063801.a.a	ENSGT00940000178559	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b ##22	ENSGT00940000157525.a #23	ENSGT00530000063604.A.d	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a
Northern pike	MODERN SPECIES	8	cyth4b (ENSELUG00000020237)	fam83fb (ENSELUG00000020195)	grap2b (ENSELUG00000020181)	ENSELUG00000028891	CACNA1I (ENSELUG00000020162)	ADAP1 (ENSELUG00000020107)	ENSELUG00000020053	lgals2b (ENSELUG00000020035)	GTPBP1 (ENSELUG00000019995)	ELFN2 (ENSELUG00000019794)	mfng (ENSELUG00000019752)	ENSELUG00000027644	ENSELUG00000019716	ENSELUG00000019705	ENSELUG00000019668	GOT1 (ENSELUG00000019698) ##22	CNNM1 (ENSELUG00000019656) #23	hoga1 (ENSELUG00000019626)	MORN4 (ENSELUG00000000862) #36	ENSELUG00000019575	slit1b (ENSELUG00000019549)	ARHGAP19 (ENSELUG00000019458)	ENSELUG00000000834	ENSELUG00000019395	ENSELUG00000026960	ENSELUG00000019362	ENSELUG00000026563	ENSELUG00000027249	ENSELUG00000029138	ENSELUG00000019312	ENSELUG00000024756
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1377																ENSGT00950000183082.b.b.a.b.c ##22	ENSGT00940000157525.a.c #23	ENSGT00530000063604.A.d.b
Salmoninae_a	ANCESTRAL SPECIES	581																ENSGT00950000183082.b.b.a.b.c ##22	ENSGT00940000157525.a.c #23
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	217																ENSGT00950000183082.b.b.a.b.c.a ##22	ENSGT00940000157525.a.d #23	ENSGT00530000063604.A.d.a	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a.b	ENSGT00940000157322.b.b.m	ENSGT00940000157322.b.b.n	ENSGT00940000157331.b.a.g.a	ENSGT01010000222294.c.b.b.b.c.a.a.a.b	ENSGT01010000222294.c.b.b.b.c.a.b.b.a.a.b.a	ENSGT00970000194718.b.b.a.a.a.a
River trout	MODERN SPECIES	31	ENSSTUG00000026651	ENSSTUG00000026634	ENSSTUG00000026619	ENSSTUG00000026604	ENSSTUG00000026596	ENSSTUG00000026592	ENSSTUG00000026518	ENSSTUG00000026500	ENSSTUG00000026473	atpv0e2 (ENSSTUG00000026458)	ENSSTUG00000026439	ENTPD7 (ENSSTUG00000025076) #19	slc25a28 (ENSSTUG00000025021) #20	NKX2-3 (ENSSTUG00000025013) #21	ENSSTUG00000025006	GOT1 (ENSSTUG00000024918) ##22	CNNM1 (ENSSTUG00000024844) #23	hoga1 (ENSSTUG00000024816)	MORN4 (ENSSTUG00000024798) #36	ENSSTUG00000024787	slit1b (ENSSTUG00000023377)	slit1b (ENSSTUG00000023316)	ARHGAP19 (ENSSTUG00000023301)	ENSSTUG00000023292	ENSSTUG00000023250	ENSSTUG00000023226	ENSSTUG00000023166	ENSSTUG00000023149	ENSSTUG00000023136	ENSSTUG00000023116	ENSSTUG00000023100
Atlantic salmon	MODERN SPECIES	28	pdcd10a (ENSSSAG00000068498)	ENSSSAG00000100476	ENSSSAG00000085561	ENSSSAG00000115384	ENSSSAG00000057876	ENSSSAG00000083043	ENSSSAG00000064152	ENSSSAG00000100135	ENSSSAG00000097274	ENSSSAG00000054738	ENSSSAG00000083628	ENSSSAG00000091296	ENSSSAG00000098092	ENSSSAG00000112578	ENSSSAG00000001886	ENSSSAG00000008959 ##22	ENSSSAG00000001468 #23	hoga1 (ENSSSAG00000110686)	slit1b (ENSSSAG00000092807)	ENSSSAG00000112556	ENSSSAG00000000233	ENSSSAG00000082949	P2RY6 (ENSSSAG00000094627)	ENSSSAG00000117227	ENSSSAG00000068440	relt (ENSSSAG00000056241)	ENSSSAG00000056253	ENSSSAG00000068429	ENSSSAG00000068432	ENSSSAG00000108106	PDE2A (ENSSSAG00000118822)
Salmo	ANCESTRAL SPECIES	244								ENSGT00940000157367.a.b.c	ENSGT01010000222294.c.b.b.b.c.a.b.b.a.a.a.b.b.a	ENSGT01010000222294.c.b.b.b.c.a.b.b.a.a.a.b.a	ENSGT00940000162476.d.a.b	ENSGT00390000007125.a.d.c	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d.c #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b.c.b ##22	ENSGT00940000157525.a.c #23
Atlantic salmon	MODERN SPECIES	3	ncf4 (ENSSSAG00000001947)	ENSSSAG00000092591	ENSSSAG00000001943	ENSSSAG00000106934	ENSSSAG00000086889	ENSSSAG00000098351	ENSSSAG00000121712	ENSSSAG00000091144	ENSSSAG00000001428	ENSSSAG00000008855	ENSSSAG00000008837	ENSSSAG00000001850	ENTPD7 (ENSSSAG00000001550) #19	SLC25A28 (ENSSSAG00000088969) #20	nkx23 (ENSSSAG00000008986) #21	GOT1 (ENSSSAG00000001473) ##22	CNNM1 (ENSSSAG00000106882) #23	ENSSSAG00000085811	ENSSSAG00000084650 #36	ENSSSAG00000001073	ENSSSAG00000087263	ENSSSAG00000101980	ENSSSAG00000101021	ENSSSAG00000112597	ENSSSAG00000118680	ENSSSAG00000113084	ENSSSAG00000103983	ENSSSAG00000095336	ENSSSAG00000001426	ARMH3 (ENSSSAG00000009412)	ENSSSAG00000109291
River trout	MODERN SPECIES	5	ENSSTUG00000036950	ENSSTUG00000037034	ENSSTUG00000037067	ENSSTUG00000037077	ENSSTUG00000037092	ENSSTUG00000037116	ENSSTUG00000037160	ENSSTUG00000037171	ENSSTUG00000037179	ENSSTUG00000037189	ATP6V0E2 (ENSSTUG00000037198)	ENSSTUG00000037216	ENTPD7 (ENSSTUG00000037239) #19	slc25a28 (ENSSTUG00000037398) #20	NKX2-3 (ENSSTUG00000037406) #21	GOT1 (ENSSTUG00000037417) ##22	ENSSTUG00000037495	ENSSTUG00000037506 #36	ENSSTUG00000037509	ENSSTUG00000037522	ARHGAP19 (ENSSTUG00000037598)	ENSSTUG00000037618	KCNIP2 (ENSSTUG00000037663)	ldb1b (ENSSTUG00000037683)	ENSSTUG00000037824	ENSSTUG00000037834	ENSSTUG00000037845	si:dkey-93h22.8 (ENSSTUG00000037850)	ENSSTUG00000037856	cant1b (ENSSTUG00000037894)	afmid (ENSSTUG00000037919)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	14	ENSGT00510000048276.j	ENSGT00390000008221.a	ENSGT00940000167614.e.a	ENSGT00900000142364	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774.f	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00530000063801.a.a	ENSGT00940000178559	ENSGT00940000161036.B.b.a	ENSGT00940000162476.d	ENSGT00390000007125.a.d	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d.c #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b.d.a.a ##22	ENSGT00940000157525.a.d #23	ENSGT00530000063604.A.d.a	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a.b	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00970000194718.b.b.a.b.b	ENSGT00940000157798.b.e	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183127.c.b.d.a.a.a.f	ENSGT00940000161847.b.a.e.a.b.b	ENSGT00950000183127.c.b.d.a.a.a.e.a	ENSGT00950000183137.a.l
Salmoninae_a	ANCESTRAL SPECIES	33	ENSGT00510000048276.i	ENSGT00390000008221.a	ENSGT00940000167614.e.a	ENSGT00940000160104.u.b	ENSGT00510000049239.a.d.b	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774.f	ENSGT01030000234599.a.b.d.b.b.a.a	ENSGT00530000063801.a.a	ENSGT00940000178559	ENSGT00940000162476.d.a.a	ENSGT00390000007125.a.d	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d.c #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b.d.a.a ##22	ENSGT00940000157525.a.d #23	ENSGT00530000063604.A.d.a	ENSGT00730000111173.h #36	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a.b	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.b.c.a.a.a.b	ENSGT00970000194718.b.b.a.b.b	ENSGT00940000157798.b.e	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183127.c.b.d.a.a.a.f	ENSGT00940000161847.b.a.e.a.b.b	ENSGT00950000183127.c.b.d.a.a.a.e.a
Oncorhynchus	ANCESTRAL SPECIES	78	ENSGT00940000167614.e.a	ENSGT00940000160104.u.b	ENSGT00510000049239.a.d.a	ENSGT00510000049239.a.d.b	ENSGT00510000046773.a.b.c.b.c.b	ENSGT00390000016774.f	ENSGT01030000234599.a.b.d.b.b.a.a	ENSGT00530000063801.a.a	ENSGT00940000178559	ENSGT00940000161036.B.b.b.b.b	ENSGT00940000162476.d.a.a	ENSGT00390000007125.a.d	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d.c #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b.d.a.a ##22	ENSGT00940000157525.a.d #23	ENSGT00530000063604.A.d.a	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a.a	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a.b	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.b.c.a.a.a.b	ENSGT00970000194718.b.b.a.b.b	ENSGT00940000157798.b.e	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00390000012872.b.e.a	ENSGT00390000011093.d.b.a
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000074609	ENSOMYG00000076182	ENSOMYG00000061457	ENSOMYG00000072675	ENSOMYG00000005207	ENSOMYG00000069513	ENSOMYG00000050715	ENSOMYG00000069678	ENSOMYG00000005358	ENSOMYG00000004973	ENSOMYG00000066880	ENTPD7 (ENSOMYG00000004811) #19	ENSOMYG00000053079	SLC25A28 (ENSOMYG00000004708) #20	NKX2-3 (ENSOMYG00000004459) #21	GOT1 (ENSOMYG00000077120) ##22	CNNM1 (ENSOMYG00000006207) #23	hoga1 (ENSOMYG00000006249)	ENSOMYG00000049220	ENSOMYG00000006456	ENSOMYG00000006387	slit1b (ENSOMYG00000006609)	ENSOMYG00000076614	ENSOMYG00000049087	ENSOMYG00000061918	ENSOMYG00000064780	ENSOMYG00000050183	ENSOMYG00000032612	ENSOMYG00000072319	ENSOMYG00000058375	ENSOMYG00000064079
Rainbow trout	MODERN SPECIES	8	ncf4 (ENSOMYG00000069276)	ENSOMYG00000050939	ENSOMYG00000071710	ENSOMYG00000005276	ENSOMYG00000050440	ENSOMYG00000069090	ENSOMYG00000052865	ENSOMYG00000055470	ENSOMYG00000064677	ENSOMYG00000056337	ENSOMYG00000065313	ENSOMYG00000075318	ENTPD7 (ENSOMYG00000004886) #19	SLC25A28 (ENSOMYG00000004834) #20	NKX2-3 (ENSOMYG00000036947) #21	GOT1 (ENSOMYG00000062775) ##22	CNNM1 (ENSOMYG00000059734) #23	hoga1 (ENSOMYG00000076754)	ENSOMYG00000071228 #36	ENSOMYG00000057804	ENSOMYG00000062698	slit1b (ENSOMYG00000056877)	ENSOMYG00000007516	ENSOMYG00000009498	ENSOMYG00000068527	ENSOMYG00000009538	ENSOMYG00000055249	ENSOMYG00000061892	ENSOMYG00000051447	ENSOMYG00000060200	ENSOMYG00000068272
Oncorhynchus_a	ANCESTRAL SPECIES	199												ENSGT00390000007125.a.d	ENSGT01100000263540.B.c #19	ENSGT00940000157049.d.c #20	ENSGT00940000157556.a.a #21	ENSGT00950000183082.b.b.a.b.d.a.a ##22	ENSGT00940000157525.a.d #23	ENSGT00530000063604.A.d.a	ENSGT00730000111173.h #36	ENSGT00940000162611.a.a.a.b	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.b.c.a.a.a.b
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	30	sult3st4 (ENSOKIG00005047919)	ENSOKIG00005047910	ELFN2 (ENSOKIG00005047897)	GTPBP1 (ENSOKIG00005047855)	lgals2b (ENSOKIG00005047829)	ENSOKIG00005047820	ENSOKIG00005047817	ADAP1 (ENSOKIG00005047571)	CACNA1I (ENSOKIG00005047375)	atpv0e2 (ENSOKIG00005047354)	ENSOKIG00005047349	ENSOKIG00005047341	ENTPD7 (ENSOKIG00005046983) #19	SLC25A28 (ENSOKIG00005046952) #20	NKX2-3 (ENSOKIG00005046944) #21	GOT1 (ENSOKIG00005046930) ##22	CNNM1 (ENSOKIG00005046908) #23	hoga1 (ENSOKIG00005046891)	ENSOKIG00005046887	ENSOKIG00005046882 #36	ENSOKIG00005046877	ENSOKIG00005046873	slit1b (ENSOKIG00005038800)	ARHGAP19 (ENSOKIG00005038309)	ENSOKIG00005038256	ENSOKIG00005038221	ENSOKIG00005038212	ENSOKIG00005038140	ENSOKIG00005038091	ENSOKIG00005038025	KCNIP2 (ENSOKIG00005038004)
Coho salmon	MODERN SPECIES	362																GOT1 (ENSOKIG00005040228) ##22	ENSOKIG00005040022
Chinook salmon	MODERN SPECIES	25	ENSOTSG00005044939	ENSOTSG00005044941	zfyve27 (ENSOTSG00005044942) #32	golga7ba (ENSOTSG00005044944) #30	crtac1a (ENSOTSG00005044946) #29	ENSOTSG00005044954	ENSOTSG00005044955	vasna (ENSOTSG00005044956)	baiap2l2b (ENSOTSG00005044957)	pla2g6 (ENSOTSG00005044959)	cbx6a (ENSOTSG00005044971)	nptxrb (ENSOTSG00005044972)	ENSOTSG00005044973	ENSOTSG00005044975	ENSOTSG00005044977	GOT1 (ENSOTSG00005044978) ##22	CNNM1 (ENSOTSG00005044980) #23	hoga1 (ENSOTSG00005044985)	NKX2-3 (ENSOTSG00005044988) #21	slc25a28 (ENSOTSG00005044989) #20	ENSOTSG00005044991 #19	ENSOTSG00005044992	ENSOTSG00005044993	ENSOTSG00005045011	ap1m2 (ENSOTSG00005046503)	CDKN2D (ENSOTSG00005036322)	ENSOTSG00005036339	keap1b (ENSOTSG00005036359)	KCNJ4 (ENSOTSG00005036361)	SOX10 (ENSOTSG00005036362)	si:dkey-43k4.3 (ENSOTSG00005036363)
Huchen	MODERN SPECIES	8097																ENSHHUG00000000980 ##22	ENSHHUG00000000995 ##22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b.d.a.b ##22
Huchen	DUPLICATION
Huchen	MODERN SPECIES	6472																GOT1 (ENSHHUG00000001250) ##22	ENSHHUG00000001242	GOT1 (ENSHHUG00000001231) ##22	ENSHHUG00000001212 #23	hoga1 (ENSHHUG00000001175)
Huchen	MODERN SPECIES	6472														GOT1 (ENSHHUG00000001250) ##22	ENSHHUG00000001242	GOT1 (ENSHHUG00000001231) ##22	ENSHHUG00000001212 #23	hoga1 (ENSHHUG00000001175)
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183082.b.b.a.b.d.b ##22
Huchen	MODERN SPECIES	11444																ENSHHUG00000015722 ##22
Elephant shark	MODERN SPECIES	1723										ENSCMIG00000015126	ENTPD7 (ENSCMIG00000015142) #19	slc25a28 (ENSCMIG00000015179) #20	ENSCMIG00000015182	ENSCMIG00000015185	nkx2.3 (ENSCMIG00000015187) #21	got1 (ENSCMIG00000015190) #22	ENSCMIG00000015216 #23	HPSE2 (ENSCMIG00000015220) #24	cnnm2a (ENSCMIG00000015232)
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183082.b.a ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183082.b.a ##22
Euteleostomi	ANCESTRAL SPECIES	488														ENSGT00940000158663	ENSGT00940000161418	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928
Sarcopterygii	ANCESTRAL SPECIES	183			ENSGT00950000183167.a.b.b.a	ENSGT00650000094724	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b
Tetrapoda	ANCESTRAL SPECIES	123		ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00650000094724	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00940000159152.c.b
Amniota	ANCESTRAL SPECIES	33	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00650000094724	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Sauria	ANCESTRAL SPECIES	27	ENSGT00950000183167.a.b.b.a	ENSGT00650000094724	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199378	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Archelosauria	ANCESTRAL SPECIES	29	ENSGT00940000155860.d	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199378	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Cryptodira	ANCESTRAL SPECIES	30	ENSGT01030000236496	ENSGT00940000155860.d	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Testudinoidea	ANCESTRAL SPECIES		ENSGT00940000155860.d	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000154715.b.k.a	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Emydidae	ANCESTRAL SPECIES		ENSGT00940000155860.d	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000154715.b.k.a	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
painted turtle	MODERN SPECIES	7	FGFR1 (ENSCPBG00000006675)	LETM2 (ENSCPBG00000006662)	NSD3 (ENSCPBG00000006622)	PLPP5 (ENSCPBG00000006595)	DDHD2 (ENSCPBG00000006582)	ENSCPBG00000006578	BAG4 (ENSCPBG00000006574)	LSM1 (ENSCPBG00000006569)	ENSCPBG00000006554	STAR (ENSCPBG00000006539)	ASH2L (ENSCPBG00000005867)	ENSCPBG00000005783	EIF4EBP1 (ENSCPBG00000005778)	ENSCPBG00000005775	ADRB3 (ENSCPBG00000005773)	GOT1L1 (ENSCPBG00000005759) ##22	ENSCPBG00000005747	RAB11FIP1 (ENSCPBG00000005742)	BRF2 (ENSCPBG00000005736)	ADGRA2 (ENSCPBG00000005726)	PLPBP (ENSCPBG00000005714)	ERLIN2 (ENSCPBG00000005704) ##13	ZNF703 (ENSCPBG00000005696)	KCNU1 (ENSCPBG00000005671)	ENSCPBG00000005652	UNC5D (ENSCPBG00000005616)	SLC4A5 (ENSCPBG00000005547)	MTHFD2 (ENSCPBG00000005523)	MOB1A (ENSCPBG00000004967)	BOLA3 (ENSCPBG00000004944)	TET3 (ENSCPBG00000004930)
Three-toed box turtle	MODERN SPECIES	20	FGFR1 (ENSTMTG00000001727)	ENSTMTG00000001719	NSD3 (ENSTMTG00000001698)	PLPP5 (ENSTMTG00000001690)	DDHD2 (ENSTMTG00000001671)	ENSTMTG00000001660	BAG4 (ENSTMTG00000001649)	LSM1 (ENSTMTG00000001636)	ENSTMTG00000001607	STAR (ENSTMTG00000001599)	ASH2L (ENSTMTG00000001526)	ENSTMTG00000001510	EIF4EBP1 (ENSTMTG00000001506)	ENSTMTG00000001481	ADRB3 (ENSTMTG00000001465)	GOT1L1 (ENSTMTG00000001448) ##22	ENSTMTG00000001435	RAB11FIP1 (ENSTMTG00000001426)	BRF2 (ENSTMTG00000001419)	ADGRA2 (ENSTMTG00000001353)	PLPBP (ENSTMTG00000001314)	ERLIN2 (ENSTMTG00000001303) ##13	ZNF703 (ENSTMTG00000001295)	KCNU1 (ENSTMTG00000001247)	UNC5D (ENSTMTG00000001187)	DUSP26 (ENSTMTG00000001154)	RNF122 (ENSTMTG00000001140)	TTI2 (ENSTMTG00000001115)	MAK16 (ENSTMTG00000001096)	SLC18A1 (ENSTMTG00000001018)	ATP6V1B2 (ENSTMTG00000000992)
Testudinidae	ANCESTRAL SPECIES	31	ENSGT00940000155860.d	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000154715.b.k.a	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Goode s thornscrub tortoise	MODERN SPECIES	11	LETM2 (ENSGEVG00005001375)	NSD3 (ENSGEVG00005001323)	PLPP5 (ENSGEVG00005001286)	DDHD2 (ENSGEVG00005001239)	ENSGEVG00005001215	BAG4 (ENSGEVG00005001203)	LSM1 (ENSGEVG00005001190)	ENSGEVG00005001166	STAR (ENSGEVG00005001143)	ASH2L (ENSGEVG00005001087)	ENSGEVG00005001070	ENSGEVG00005001050	ENSGEVG00005001036	ENSGEVG00005001018	ADRB3 (ENSGEVG00005001001)	GOT1L1 (ENSGEVG00005000956) ##22	ENSGEVG00005000924	RAB11FIP1 (ENSGEVG00005000899)	BRF2 (ENSGEVG00005000872)	ENSGEVG00005000859	PLPBP (ENSGEVG00005000833)	ERLIN2 (ENSGEVG00005000806) ##13	ZNF703 (ENSGEVG00005000791)	KCNU1 (ENSGEVG00005000762)	UNC5D (ENSGEVG00005000704)	DUSP26 (ENSGEVG00005000631)	RNF122 (ENSGEVG00005000577)	TTI2 (ENSGEVG00005000553)	MAK16 (ENSGEVG00005000537)	SLC18A1 (ENSGEVG00005000492)	ATP6V1B2 (ENSGEVG00005000461)
Abingdon island giant tortoise	MODERN SPECIES	1193															ADRB3 (ENSCABG00000007776)	ENSCABG00000007778 ##22
Chinese turtle	MODERN SPECIES	1928			FGFR1 (ENSPSIG00000006400)	LETM2 (ENSPSIG00000009394)	NSD3 (ENSPSIG00000010362)	PLPP5 (ENSPSIG00000010633)	DDHD2 (ENSPSIG00000011144)	BAG4 (ENSPSIG00000012400)	LSM1 (ENSPSIG00000012563)	ENSPSIG00000012626	STAR (ENSPSIG00000012823)	ASH2L (ENSPSIG00000013417)	ENSPSIG00000013969	ENSPSIG00000013981	ADRB3 (ENSPSIG00000014019)	GOT1L1 (ENSPSIG00000014051) ##22	ENSPSIG00000014512	RAB11FIP1 (ENSPSIG00000014732)	BRF2 (ENSPSIG00000014794)
Lepidosauria	ANCESTRAL SPECIES	59	ENSGT00950000183167.a.b.b.a	ENSGT00650000094724	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199378	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Episquamata	ANCESTRAL SPECIES	12	ENSGT00510000049083.a.b	ENSGT00510000049083.a.a	ENSGT00950000185671	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199378	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Toxicofera	ANCESTRAL SPECIES	20	ENSGT00940000154909	ENSGT00510000049083.a.b	ENSGT00510000049083.a.a	ENSGT00950000185671	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Elapidae	ANCESTRAL SPECIES	15	ENSGT00940000154909	ENSGT01090000262429	ENSGT00510000049083.a.b	ENSGT00510000049083.a.a	ENSGT00950000185671	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928.b	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b.c	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Elapidae_a	ANCESTRAL SPECIES	42	ENSGT00940000154909	ENSGT01090000262429	ENSGT00510000049083.a.b	ENSGT00510000049083.a.a	ENSGT00950000185671	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928.b	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b.c	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Blue-lipped sea krait	MODERN SPECIES	7753																ENSLLTG00000005460 ##22
Acanthophiinae	ANCESTRAL SPECIES	54	ENSGT01090000262429	ENSGT00510000049083.a.b	ENSGT00510000049083.a.a	ENSGT00950000185671	ENSGT00940000159772.b	ENSGT00940000159772.a	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928.b	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b.c	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Mainland tiger snake	MODERN SPECIES	37	ENSNSUG00000000366	ENSNSUG00000000367	ENSNSUG00000000368	ENSNSUG00000000370	ENSNSUG00000000376	DDHD2 (ENSNSUG00000000387)	BAG4 (ENSNSUG00000000839)	LSM1 (ENSNSUG00000000840)	ENSNSUG00000000843	ENSNSUG00000000852	STAR (ENSNSUG00000000853)	ASH2L (ENSNSUG00000000871)	ENSNSUG00000001230	EIF4EBP1 (ENSNSUG00000001233)	ADRB3 (ENSNSUG00000001234)	GOT1L1 (ENSNSUG00000001236) ##22	ENSNSUG00000001252	ENSNSUG00000001256	BRF2 (ENSNSUG00000001267)	ADGRA2 (ENSNSUG00000001272)	PLPBP (ENSNSUG00000002082)	ERLIN2 (ENSNSUG00000002103) ##13	ZNF703 (ENSNSUG00000002212)	ENSNSUG00000002230	KCNU1 (ENSNSUG00000002231)	UNC5D (ENSNSUG00000002236)	DUSP26 (ENSNSUG00000002247)	RNF122 (ENSNSUG00000002252)	TTI2 (ENSNSUG00000002256)	MAK16 (ENSNSUG00000002288)	SLC18A1 (ENSNSUG00000002290)
Eastern brown snake	MODERN SPECIES	92		ENSPTXG00000014634	ENSPTXG00000014635	ENSPTXG00000014636	ENSPTXG00000014637	PLPP5 (ENSPTXG00000014638)	DDHD2 (ENSPTXG00000014639)	BAG4 (ENSPTXG00000014641)	LSM1 (ENSPTXG00000014642)	ENSPTXG00000014643	STAR (ENSPTXG00000014644)	ASH2L (ENSPTXG00000014645)	ENSPTXG00000014646	EIF4EBP1 (ENSPTXG00000014647)	ENSPTXG00000014648	GOT1L1 (ENSPTXG00000014649) ##22	ENSPTXG00000014650	RAB11FIP1 (ENSPTXG00000014651)	BRF2 (ENSPTXG00000014652)	ADGRA2 (ENSPTXG00000014653)	PLPBP (ENSPTXG00000014658)	ERLIN2 (ENSPTXG00000014660) ##13	ZNF703 (ENSPTXG00000014662)	KCNU1 (ENSPTXG00000014664)	UNC5D (ENSPTXG00000014670)
Indian cobra	MODERN SPECIES	7	LRRTM4 (ENSNNAG00000003671)	ENSNNAG00000003681	ENSNNAG00000003697	ENSNNAG00000003717	PLPP5 (ENSNNAG00000003729)	DDHD2 (ENSNNAG00000003793)	ENSNNAG00000003865	LSM1 (ENSNNAG00000003883)	ENSNNAG00000003917	ENSNNAG00000003952	STAR (ENSNNAG00000003969)	ASH2L (ENSNNAG00000003990)	ENSNNAG00000004040	EIF4EBP1 (ENSNNAG00000004069)	ADRB3 (ENSNNAG00000004083)	GOT1L1 (ENSNNAG00000004109) ##22	ENSNNAG00000004140	RAB11FIP1 (ENSNNAG00000004160)	BRF2 (ENSNNAG00000004177)	ADGRA2 (ENSNNAG00000004212)	PLPBP (ENSNNAG00000004333)	ERLIN2 (ENSNNAG00000004403) ##13	ZNF703 (ENSNNAG00000004463)	ENSNNAG00000004476	ENSNNAG00000004492	ENSNNAG00000004515	ENSNNAG00000004533	ENSNNAG00000004553	DUSP26 (ENSNNAG00000004573)	RNF122 (ENSNNAG00000004587)	TTI2 (ENSNNAG00000004632)
Lizard	MODERN SPECIES	1019	ENSACAG00000002160	ENSACAG00000035344	ENSACAG00000038136	ENSACAG00000044596	ENSACAG00000038749	ENSACAG00000034697	PLPP5 (ENSACAG00000002081)	ENSACAG00000002046	BAG4 (ENSACAG00000043558)	LSM1 (ENSACAG00000040457)	ENSACAG00000000567	ASH2L (ENSACAG00000000295)	EIF4EBP1 (ENSACAG00000038546)	ENSACAG00000000273	ADRB3 (ENSACAG00000000272)	GOT1L1 (ENSACAG00000000241) ##22	ENSACAG00000035837	ENSACAG00000043247	ENSACAG00000024240	ENSACAG00000039559	ENSACAG00000040380	RAB11FIP1 (ENSACAG00000000233)	BRF2 (ENSACAG00000000225)	ENSACAG00000010337	ADGRA2 (ENSACAG00000000195)	ENSACAG00000000193	PLPBP (ENSACAG00000000181)	ERLIN2 (ENSACAG00000043431) ##13	ZNF703 (ENSACAG00000022262)
Laterata	ANCESTRAL SPECIES	15	ENSGT00510000049083.a.b	ENSGT00510000049083.a.a	ENSGT00950000185671	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199378	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000163919	ENSGT00940000159932	ENSGT01070000253744.b.a.a.a	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b
Common wall lizard	MODERN SPECIES	6	ENSPMRG00000014267	ENSPMRG00000014229	ENSPMRG00000014224	PLPP5 (ENSPMRG00000014218)	DDHD2 (ENSPMRG00000014189)	ENSPMRG00000014176	BAG4 (ENSPMRG00000014172)	LSM1 (ENSPMRG00000014167)	ENSPMRG00000014143	STAR (ENSPMRG00000014126)	ASH2L (ENSPMRG00000014115)	ENSPMRG00000014105	EIF4EBP1 (ENSPMRG00000018654)	ENSPMRG00000018641	ADRB3 (ENSPMRG00000018633)	GOT1L1 (ENSPMRG00000018613) ##22	ENSPMRG00000018598	ENSPMRG00000018592	ENSPMRG00000018590	ENSPMRG00000018583	ENSPMRG00000018572	ENSPMRG00000018564	RAB11FIP1 (ENSPMRG00000018553)	ENSPMRG00000018543	ENSPMRG00000018538	ENSPMRG00000018533	LZTS1 (ENSPMRG00000018526)	ATP6V1B2 (ENSPMRG00000018515)	ENSPMRG00000018493	ENSPMRG00000018480	SLC18A1 (ENSPMRG00000018465)
Argentine black and white tegu	MODERN SPECIES	42	DDX6 (ENSSMRG00000021727)	ENSSMRG00000021728	ENSSMRG00000021729	ENSSMRG00000021730	PLPP5 (ENSSMRG00000021747)	DDHD2 (ENSSMRG00000021748)	BAG4 (ENSSMRG00000021751)	LSM1 (ENSSMRG00000021753)	ENSSMRG00000021754	STAR (ENSSMRG00000021757)	ASH2L (ENSSMRG00000021759)	ENSSMRG00000021760	EIF4EBP1 (ENSSMRG00000021761)	ENSSMRG00000021763	ADRB3 (ENSSMRG00000021797)	GOT1L1 (ENSSMRG00000021799) ##22	MYL7 (ENSSMRG00000021804)	GCK (ENSSMRG00000021806)	YKT6 (ENSSMRG00000021811)	CAMK2B (ENSSMRG00000021813)	NUDCD3 (ENSSMRG00000021815)	PGAM2 (ENSSMRG00000021816)	ENSSMRG00000021817	ZMIZ2 (ENSSMRG00000021818)	OGDH (ENSSMRG00000021819)	ENSSMRG00000021820	ENSSMRG00000021821	ENSSMRG00000021822	CEP164 (ENSSMRG00000021823)	DSCAML1 (ENSSMRG00000021825)	ENSSMRG00000021859
Mammalia	ANCESTRAL SPECIES	27	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b
Theria	ANCESTRAL SPECIES	38	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859
Marsupialia	ANCESTRAL SPECIES	19	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000155734.b	ENSGT00940000155734.a.b	ENSGT00940000155734.a.a
Opossum	MODERN SPECIES		ENSMODG00000010545	TM2D2 (ENSMODG00000010554)	HTRA4 (ENSMODG00000010581)	PLEKHA2 (ENSMODG00000010593)	TACC1 (ENSMODG00000010620)	FGFR1 (ENSMODG00000010647)	LETM2 (ENSMODG00000010654)	NSD3 (ENSMODG00000010691)	PLPP5 (ENSMODG00000010705)	DDHD2 (ENSMODG00000010714)	BAG4 (ENSMODG00000010723)	STAR (ENSMODG00000010748)	ASH2L (ENSMODG00000010761)	ENSMODG00000039657	ADRB3 (ENSMODG00000010778)	GOT1L1 (ENSMODG00000010800) ##22	ENSMODG00000010813	BRF2 (ENSMODG00000010822)	ADGRA2 (ENSMODG00000010848)	ERLIN2 (ENSMODG00000010889) ##13	ZNF703 (ENSMODG00000010894)	ENSMODG00000047823	ENSMODG00000045103	ENSMODG00000050376	UNC5D (ENSMODG00000010980)	ENSMODG00000028692	ENSMODG00000046726	ENSMODG00000023184	ENSMODG00000023186	DUSP26 (ENSMODG00000011051)	RNF122 (ENSMODG00000011059)
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000155734.b	ENSGT00940000155734.a.b	ENSGT00940000155734.a.a
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000155734.a.b	ENSGT00940000155734.a.a	ENSGT00390000008041.C	ENSGT00940000153745.a
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000155734.a.b	ENSGT00940000155734.a.a	ENSGT00390000008041.C	ENSGT00940000153745.a
koala	MODERN SPECIES	20	ENSPCIG00000014191	ENSPCIG00000035827	PLEKHA2 (ENSPCIG00000014194)	TACC1 (ENSPCIG00000014200)	FGFR1 (ENSPCIG00000003718)	LETM2 (ENSPCIG00000008865)	NSD3 (ENSPCIG00000008870)	PLPP5 (ENSPCIG00000008877)	DDHD2 (ENSPCIG00000008878)	BAG4 (ENSPCIG00000008879)	LSM1 (ENSPCIG00000008880)	STAR (ENSPCIG00000008881)	ASH2L (ENSPCIG00000008882)	EIF4EBP1 (ENSPCIG00000036451)	ADRB3 (ENSPCIG00000008885)	GOT1L1 (ENSPCIG00000008886) ##22	RAB11FIP1 (ENSPCIG00000008888)	BRF2 (ENSPCIG00000008891)	ADGRA2 (ENSPCIG00000008895)	PLPBP (ENSPCIG00000008908)	ERLIN2 (ENSPCIG00000008913) ##13	ZNF703 (ENSPCIG00000035170)	ENSPCIG00000007142	ENSPCIG00000033834	UNC5D (ENSPCIG00000011973)	ENSPCIG00000015650	DUSP26 (ENSPCIG00000028181)	RNF122 (ENSPCIG00000034986)	TTI2 (ENSPCIG00000028006)	MAK16 (ENSPCIG00000028005)	ENSPCIG00000028003
Common wonbat	MODERN SPECIES	1017	TM2D2 (ENSVURG00010009921)	ENSVURG00010009936	ENSVURG00010009947	TACC1 (ENSVURG00010009968)	FGFR1 (ENSVURG00010010009)	ENSVURG00010010093	NSD3 (ENSVURG00010010113)	PLPP5 (ENSVURG00010010146)	DDHD2 (ENSVURG00010010168)	BAG4 (ENSVURG00010010211)	LSM1 (ENSVURG00010010225)	STAR (ENSVURG00010010240)	ASH2L (ENSVURG00010010263)	EIF4EBP1 (ENSVURG00010010388)	ADRB3 (ENSVURG00010010393)	GOT1L1 (ENSVURG00010010404) ##22	ENSVURG00010010416	ENSVURG00010010429	BRF2 (ENSVURG00010010438)	ADGRA2 (ENSVURG00010010473)	PLPBP (ENSVURG00010011165)	ERLIN2 (ENSVURG00010011180) ##13	ZNF703 (ENSVURG00010011201)	ENSVURG00010011215	ENSVURG00010011221	ENSVURG00010011231	UNC5D (ENSVURG00010011273)	ENSVURG00010011635	DUSP26 (ENSVURG00010011646)	RNF122 (ENSVURG00010011653)	TTI2 (ENSVURG00010011659)
Wallaby	MODERN SPECIES	7745																GOT1L1 (ENSMEUG00000007248) ##22	ENSMEUG00000007215
Tasmanian devil	MODERN SPECIES	1	ADAM18 (ENSSHAG00000018599)	ADAM9 (ENSSHAG00000018539)	TM2D2 (ENSSHAG00000018534)	HTRA4 (ENSSHAG00000018514)	PLEKHA2 (ENSSHAG00000018393)	TACC1 (ENSSHAG00000027622)	FGFR1 (ENSSHAG00000017666)	LETM2 (ENSSHAG00000017634)	NSD3 (ENSSHAG00000017411)	DDHD2 (ENSSHAG00000017364)	BAG4 (ENSSHAG00000017318)	LSM1 (ENSSHAG00000022000)	STAR (ENSSHAG00000017190)	ASH2L (ENSSHAG00000024946)	ADRB3 (ENSSHAG00000025094)	ENSSHAG00000016864 ##22	ENSSHAG00000030221	BRF2 (ENSSHAG00000011928)	ADGRA2 (ENSSHAG00000016544)	PLPBP (ENSSHAG00000016447)	ERLIN2 (ENSSHAG00000016369) ##13	ZNF703 (ENSSHAG00000027883)	KCNU1 (ENSSHAG00000011303)	UNC5D (ENSSHAG00000012207)	ENSSHAG00000023368	DUSP26 (ENSSHAG00000023682)	RNF122 (ENSSHAG00000008057)	TTI2 (ENSSHAG00000007730)	MAK16 (ENSSHAG00000007593)	ENSSHAG00000030276	ENSSHAG00000007275
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00980000201429
Atlantogenata	ANCESTRAL SPECIES	23	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Afrotheria	ANCESTRAL SPECIES	19	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Afrotheria_a	ANCESTRAL SPECIES	18	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Elephant	MODERN SPECIES	225	ADAM9 (ENSLAFG00000004709)	TM2D2 (ENSLAFG00000002554)	PLEKHA2 (ENSLAFG00000001876)	TACC1 (ENSLAFG00000008457)	FGFR1 (ENSLAFG00000018249)	LETM2 (ENSLAFG00000018239)	NSD3 (ENSLAFG00000014727)	PLPP5 (ENSLAFG00000028988)	DDHD2 (ENSLAFG00000002167)	BAG4 (ENSLAFG00000018299)	LSM1 (ENSLAFG00000003534)	STAR (ENSLAFG00000002087)	ASH2L (ENSLAFG00000002084)	EIF4EBP1 (ENSLAFG00000026054)	ADRB3 (ENSLAFG00000004252)	GOT1L1 (ENSLAFG00000031242) ##22	ENSLAFG00000004250	BRF2 (ENSLAFG00000004248)	ADGRA2 (ENSLAFG00000022291)	PLPBP (ENSLAFG00000023084)	ERLIN2 (ENSLAFG00000011421) ##13	ZNF703 (ENSLAFG00000032676)	KCNU1 (ENSLAFG00000020552)	UNC5D (ENSLAFG00000004948)	DUSP26 (ENSLAFG00000000679)	RNF122 (ENSLAFG00000000678)	TTI2 (ENSLAFG00000027910)	MAK16 (ENSLAFG00000026404)	FUT10 (ENSLAFG00000014889)	NRG1 (ENSLAFG00000016872)	WRN (ENSLAFG00000004434)
Hyrax	MODERN SPECIES	12121															ADRB3 (ENSPCAG00000012859)	GOT1L1 (ENSPCAG00000012885) ##22
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000158064	ENSGT00940000156991	ENSGT00960000193286	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326
Glires	ANCESTRAL SPECIES	8	ENSGT00940000158064	ENSGT00940000156991	ENSGT00960000193286	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326
Rodentia	ANCESTRAL SPECIES	21	ENSGT00940000158064	ENSGT00940000156991	ENSGT00960000193286	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326
Rodentia_A	ANCESTRAL SPECIES	21	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Hystricomorpha	ANCESTRAL SPECIES	21	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Naked mole-rat female	MODERN SPECIES	25	FGFR1 (ENSHGLG00000009134)	ENSHGLG00000047222	ENSHGLG00000047845	ENSHGLG00000039564	ENSHGLG00000003334	NSD3 (ENSHGLG00000003037)	PLPP5 (ENSHGLG00000003435)	DDHD2 (ENSHGLG00000003583)	ENSHGLG00000020025	BAG4 (ENSHGLG00000004123)	LSM1 (ENSHGLG00000048140)	STAR (ENSHGLG00000040613)	ASH2L (ENSHGLG00000002367)	EIF4EBP1 (ENSHGLG00000002957)	ADRB3 (ENSHGLG00000002989)	GOT1L1 (ENSHGLG00000045726) ##22	ENSHGLG00000003171	BRF2 (ENSHGLG00000003639)	ADGRA2 (ENSHGLG00000003938)	PROSC (ENSHGLG00000041569)	ERLIN2 (ENSHGLG00000035041) ##13	ZNF703 (ENSHGLG00000010999)	ENSHGLG00000007555	KCNU1 (ENSHGLG00000015824)	ENSHGLG00000037018	UNC5D (ENSHGLG00000009719)	ENSHGLG00000036058	DUSP26 (ENSHGLG00000012175)	RNF122 (ENSHGLG00000035559)	TTI2 (ENSHGLG00000002506)	MAK16 (ENSHGLG00000002981)
Hystricomorpha_a	ANCESTRAL SPECIES	20	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Hystricomorpha_b	ANCESTRAL SPECIES	86	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Long-tailed chinchilla	MODERN SPECIES	170	HTRA4 (ENSCLAG00000001919)	PLEKHA2 (ENSCLAG00000001808)	TACC1 (ENSCLAG00000001653)	ENSCLAG00000001595	FGFR1 (ENSCLAG00000002395)	LETM2 (ENSCLAG00000001771)	NSD3 (ENSCLAG00000001493)	PLPP5 (ENSCLAG00000001265)	DDHD2 (ENSCLAG00000001288)	BAG4 (ENSCLAG00000001230)	LSM1 (ENSCLAG00000001137)	STAR (ENSCLAG00000006577)	ASH2L (ENSCLAG00000005615)	EIF4EBP1 (ENSCLAG00000005481)	ADRB3 (ENSCLAG00000005285)	GOT1L1 (ENSCLAG00000004452) ##22	RAB11FIP1 (ENSCLAG00000003452)	BRF2 (ENSCLAG00000003351)	ADGRA2 (ENSCLAG00000002684)	PLPBP (ENSCLAG00000001126)	ERLIN2 (ENSCLAG00000001013) ##13	ZNF703 (ENSCLAG00000000911)	ENSCLAG00000000890	UNC5D (ENSCLAG00000002344)	DUSP26 (ENSCLAG00000003277)	RNF122 (ENSCLAG00000003028)	TTI2 (ENSCLAG00000002873)	MAK16 (ENSCLAG00000002726)	FUT10 (ENSCLAG00000001573)	NRG1 (ENSCLAG00000001108)	WRN (ENSCLAG00000000817)
Degu	MODERN SPECIES	129	PLEKHA2 (ENSODEG00000005331)	TACC1 (ENSODEG00000005391)	ENSODEG00000005233	FGFR1 (ENSODEG00000006923)	LETM2 (ENSODEG00000004263)	NSD3 (ENSODEG00000007623)	PLPP5 (ENSODEG00000008151)	ENSODEG00000005536	ENSODEG00000019078	BAG4 (ENSODEG00000004593)	LSM1 (ENSODEG00000004834)	STAR (ENSODEG00000004988)	ASH2L (ENSODEG00000004985)	EIF4EBP1 (ENSODEG00000005774)	ADRB3 (ENSODEG00000019478)	GOT1L1 (ENSODEG00000004934) ##22	ENSODEG00000005421	BRF2 (ENSODEG00000004728)	ADGRA2 (ENSODEG00000005680)	PLPBP (ENSODEG00000004371)	ERLIN2 (ENSODEG00000005686) ##13	ZNF703 (ENSODEG00000005833)	KCNU1 (ENSODEG00000005868)	ENSODEG00000006802	UNC5D (ENSODEG00000005959)	DUSP26 (ENSODEG00000005243)	RNF122 (ENSODEG00000005757)	TTI2 (ENSODEG00000005419)	ENSODEG00000005524	FUT10 (ENSODEG00000005799)	ENSODEG00000005646
Guinea pig	MODERN SPECIES	117	ADAM9 (ENSCPOG00000007755)	TM2D2 (ENSCPOG00000031981)	ENSCPOG00000002695	PLEKHA2 (ENSCPOG00000035018)	TACC1 (ENSCPOG00000020618)	FGFR1 (ENSCPOG00000006553)	ENSCPOG00000040742	NSD3 (ENSCPOG00000014573)	PLPP5 (ENSCPOG00000021526)	DDHD2 (ENSCPOG00000014566)	BAG4 (ENSCPOG00000012592)	LSM1 (ENSCPOG00000032671)	STAR (ENSCPOG00000003330)	ASH2L (ENSCPOG00000003327)	EIF4EBP1 (ENSCPOG00000039903)	GOT1L1 (ENSCPOG00000024746) ##22	ENSCPOG00000033083	BRF2 (ENSCPOG00000032038)	ADGRA2 (ENSCPOG00000006231)	PLPBP (ENSCPOG00000012671)	ERLIN2 (ENSCPOG00000036298) ##13	KCNU1 (ENSCPOG00000023207)	UNC5D (ENSCPOG00000013033)
Sciuridae	ANCESTRAL SPECIES	47	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Marmotini	ANCESTRAL SPECIES	82	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Marmotini_b	ANCESTRAL SPECIES	173	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817
Squirrel	MODERN SPECIES	310	TM2D2 (ENSSTOG00000033768)	HTRA4 (ENSSTOG00000015021)	PLEKHA2 (ENSSTOG00000015015)	ENSSTOG00000015010	FGFR1 (ENSSTOG00000001175)	LETM2 (ENSSTOG00000001161)	NSD3 (ENSSTOG00000001140)	PLPP5 (ENSSTOG00000001131)	DDHD2 (ENSSTOG00000001105)	BAG4 (ENSSTOG00000006867)	LSM1 (ENSSTOG00000026870)	STAR (ENSSTOG00000006855)	ASH2L (ENSSTOG00000006825)	ENSSTOG00000006816	ADRB3 (ENSSTOG00000024747)	GOT1L1 (ENSSTOG00000019449) ##22	ENSSTOG00000005565	BRF2 (ENSSTOG00000027742)	ADGRA2 (ENSSTOG00000027934)	PLPBP (ENSSTOG00000005543)	ERLIN2 (ENSSTOG00000024581) ##13	ZNF703 (ENSSTOG00000005512)	KCNU1 (ENSSTOG00000023181)
Arctic ground squirrel	MODERN SPECIES	307	TM2D2 (ENSUPAG00010023898)	HTRA4 (ENSUPAG00010023899)	PLEKHA2 (ENSUPAG00010023900)	TACC1 (ENSUPAG00010023902)	FGFR1 (ENSUPAG00010023903)	ENSUPAG00010023905	NSD3 (ENSUPAG00010023907)	PLPP5 (ENSUPAG00010023929)	DDHD2 (ENSUPAG00010023930)	BAG4 (ENSUPAG00010023931)	LSM1 (ENSUPAG00010023933)	STAR (ENSUPAG00010023936)	ASH2L (ENSUPAG00010023941)	ENSUPAG00010023945	ADRB3 (ENSUPAG00010023946)	GOT1L1 (ENSUPAG00010023948) ##22	ENSUPAG00010023950	BRF2 (ENSUPAG00010023951)	ADGRA2 (ENSUPAG00010023953)	PLPBP (ENSUPAG00010023957)	ERLIN2 (ENSUPAG00010023958) ##13	ZNF703 (ENSUPAG00010023959)	KCNU1 (ENSUPAG00010023963)
Alpin marmot	MODERN SPECIES	72	PLEKHA2 (ENSMMMG00000016171)	TACC1 (ENSMMMG00000016159)	ENSMMMG00000016143	FGFR1 (ENSMMMG00000015932)	LETM2 (ENSMMMG00000015901)	NSD3 (ENSMMMG00000015647)	PLPP5 (ENSMMMG00000015628)	DDHD2 (ENSMMMG00000015566)	BAG4 (ENSMMMG00000015557)	LSM1 (ENSMMMG00000015551)	STAR (ENSMMMG00000015545)	ASH2L (ENSMMMG00000015337)	ENSMMMG00000015332	ENSMMMG00000015330	ADRB3 (ENSMMMG00000015315)	GOT1L1 (ENSMMMG00000015310) ##22	ENSMMMG00000015299	BRF2 (ENSMMMG00000015291)	ENSMMMG00000015282	PLPBP (ENSMMMG00000015271)	ERLIN2 (ENSMMMG00000015144) ##13	KCNU1 (ENSMMMG00000015009)	UNC5D (ENSMMMG00000014851)	ENSMMMG00000014835	ENSMMMG00000014827	DUSP26 (ENSMMMG00000014814)	RNF122 (ENSMMMG00000014800)	TTI2 (ENSMMMG00000014782)	ENSMMMG00000014771	ENSMMMG00000014767	ENSMMMG00000014764
Eurasian red squirrel	MODERN SPECIES	14	PLEKHA2 (ENSSVLG00005011303)	TACC1 (ENSSVLG00005011491)	FGFR1 (ENSSVLG00005011874)	LETM2 (ENSSVLG00005012521)	NSD3 (ENSSVLG00005013101)	ENSSVLG00005013154	PLPP5 (ENSSVLG00005013468)	DDHD2 (ENSSVLG00005013607)	BAG4 (ENSSVLG00005013686)	LSM1 (ENSSVLG00005013791)	STAR (ENSSVLG00005013903)	ASH2L (ENSSVLG00005014040)	EIF4EBP1 (ENSSVLG00005014183)	ENSSVLG00005014228	ADRB3 (ENSSVLG00005014273)	GOT1L1 (ENSSVLG00005014325) ##22	ENSSVLG00005014501	BRF2 (ENSSVLG00005014567)	ADGRA2 (ENSSVLG00005014696)	ENSSVLG00005014866	ENSSVLG00005014990	ENSSVLG00005015041 ##13	ENSSVLG00005015167 ##13	ZNF703 (ENSSVLG00005015279)	KCNU1 (ENSSVLG00005015391)	UNC5D (ENSSVLG00005015920)	ENSSVLG00005016560	DUSP26 (ENSSVLG00005016592)	RNF122 (ENSSVLG00005016614)	TTI2 (ENSSVLG00005016661)	MAK16 (ENSSVLG00005016730)
Rodentia_B	ANCESTRAL SPECIES	24	ENSGT00940000158064	ENSGT00940000156991	ENSGT00960000193286	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326
Myomorpha	ANCESTRAL SPECIES	53												ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474
Muroidea	ANCESTRAL SPECIES	63												ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474
Muroidea_A	ANCESTRAL SPECIES	26	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT01060000253534	ENSGT00940000157326	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00950000182815.a.a.b	ENSGT00940000153661.a.b.a.b.a.b.b.a	ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474
Cricetidae	ANCESTRAL SPECIES	23	ENSGT00390000006260	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT00940000157326	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00950000182815.a.a.b	ENSGT00940000153661.a.b.a.b.a.b.b.a	ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474	ENSGT00940000155477
Cricetinae	ANCESTRAL SPECIES	25	ENSGT00390000006260	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT00940000157326	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00950000182815.a.a.b	ENSGT00940000153661.a.b.a.b.a.b.b.a	ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474	ENSGT00940000155477
Chinese hamster chok1gshd	MODERN SPECIES	1	Wrn (ENSCGRG00001016491)	ENSCGRG00001022694	Nrg1 (ENSCGRG00001024689)	ENSCGRG00001014339	Fut10 (ENSCGRG00001014936)	Mak16 (ENSCGRG00001016542)	Tti2 (ENSCGRG00001014541)	Rnf122 (ENSCGRG00001015247)	Dusp26 (ENSCGRG00001016001)	Unc5d (ENSCGRG00001016022)	ENSCGRG00001024660	Chrna6 (ENSCGRG00001024796)	Chrnb3 (ENSCGRG00001024861)	Eif4ebp1 (ENSCGRG00001012311)	Adrb3 (ENSCGRG00001013361)	Got1l1 (ENSCGRG00001008254) ##22	ENSCGRG00001009456	Brf2 (ENSCGRG00001016656)	Adgra2 (ENSCGRG00001017775)	Plpbp (ENSCGRG00001019368)	Erlin2 (ENSCGRG00001015168) ##13	Zfp703 (ENSCGRG00001015865)	Thap1 (ENSCGRG00001018657)	Rnf170 (ENSCGRG00001019532)	Hook3 (ENSCGRG00001010796)	Fnta (ENSCGRG00001016225)	Pomk (ENSCGRG00001016606)	Hgsnat (ENSCGRG00001024858)	Kcnu1 (ENSCGRG00001023216)	Ash2l (ENSCGRG00001023804)	Star (ENSCGRG00001024286)
Golden Hamster	MODERN SPECIES	624	Tex15 (ENSMAUG00000013992)	Purg (ENSMAUG00000010214)	Wrn (ENSMAUG00000016235)	Nrg1 (ENSMAUG00000022160)	Fut10 (ENSMAUG00000021420)	Mak16 (ENSMAUG00000008496)	Tti2 (ENSMAUG00000016364)	Rnf122 (ENSMAUG00000009969)	Dusp26 (ENSMAUG00000016795)	Unc5d (ENSMAUG00000021906)	ENSMAUG00000009343	Chrna6 (ENSMAUG00000006256)	Chrnb3 (ENSMAUG00000016686)	Eif4ebp1 (ENSMAUG00000013038)	Adrb3 (ENSMAUG00000019598)	Got1l1 (ENSMAUG00000008211) ##22	ENSMAUG00000016631	ENSMAUG00000008611	Brf2 (ENSMAUG00000016444)	Adgra2 (ENSMAUG00000013860)	Plpbp (ENSMAUG00000015319)	Erlin2 (ENSMAUG00000014258) ##13	Zfp703 (ENSMAUG00000019300)	Thap1 (ENSMAUG00000012936)	Rnf170 (ENSMAUG00000022149)	Hook3 (ENSMAUG00000014850)	Fnta (ENSMAUG00000003294)	Pomk (ENSMAUG00000011326)	Hgsnat (ENSMAUG00000021909)	Kcnu1 (ENSMAUG00000017852)	ENSMAUG00000014290
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00390000006260	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT00940000157326	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00950000182815.a.a.b	ENSGT00940000153661.a.b.a.b.a.b.b.a	ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474	ENSGT00940000155477
Northern American deer mouse	MODERN SPECIES	8	Nrg1 (ENSPEMG00000022891)	ENSPEMG00000022149	Fut10 (ENSPEMG00000008967)	Mak16 (ENSPEMG00000015171)	Tti2 (ENSPEMG00000015846)	Rnf122 (ENSPEMG00000026194)	Dusp26 (ENSPEMG00000000437)	Unc5d (ENSPEMG00000004417)	ENSPEMG00000024747	ENSPEMG00000026138	ENSPEMG00000006195	Chrna6 (ENSPEMG00000023132)	Chrnb3 (ENSPEMG00000023805)	Eif4ebp1 (ENSPEMG00000009917)	Adrb3 (ENSPEMG00000007552)	Got1l1 (ENSPEMG00000013690) ##22	ENSPEMG00000011100	Brf2 (ENSPEMG00000011029)	Adgra2 (ENSPEMG00000012668)	Plpbp (ENSPEMG00000008629)	Erlin2 (ENSPEMG00000017888) ##13	Zfp703 (ENSPEMG00000016632)	Thap1 (ENSPEMG00000030463)	Rnf170 (ENSPEMG00000025666)	Hook3 (ENSPEMG00000008689)	Fnta (ENSPEMG00000016669)	Pomk (ENSPEMG00000030208)	Hgsnat (ENSPEMG00000009369)	Kcnu1 (ENSPEMG00000013411)	Ash2l (ENSPEMG00000000261)	Star (ENSPEMG00000011282)
Prairie vole	MODERN SPECIES	356	Tex15 (ENSMOCG00000020732)	Purg (ENSMOCG00000008083)	Wrn (ENSMOCG00000013972)	Nrg1 (ENSMOCG00000014264)	Fut10 (ENSMOCG00000016849)	Mak16 (ENSMOCG00000007445)	Tti2 (ENSMOCG00000005440)	Rnf122 (ENSMOCG00000001095)	Dusp26 (ENSMOCG00000021310)	Unc5d (ENSMOCG00000014254)	ENSMOCG00000000492	Chrna6 (ENSMOCG00000011405)	Chrnb3 (ENSMOCG00000019407)	Eif4ebp1 (ENSMOCG00000001602)	Adrb3 (ENSMOCG00000022956)	Got1l1 (ENSMOCG00000016805) ##22	F8a (ENSMOCG00000007539)	ENSMOCG00000015989	Brf2 (ENSMOCG00000014610)	Adgra2 (ENSMOCG00000003017)	Plpbp (ENSMOCG00000019777)	Erlin2 (ENSMOCG00000022836) ##13	Zfp703 (ENSMOCG00000013821)	Thap1 (ENSMOCG00000011649)	Rnf170 (ENSMOCG00000010808)	Hook3 (ENSMOCG00000001847)	Fnta (ENSMOCG00000020550)	Pomk (ENSMOCG00000019550)	Hgsnat (ENSMOCG00000000088)	Kcnu1 (ENSMOCG00000000959)	Ash2l (ENSMOCG00000001027)
Murinae	ANCESTRAL SPECIES	23	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT01060000253534	ENSGT00940000157326	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00950000182815.a.a.b	ENSGT00940000153661.a.b.a.b.a.b.b.a	ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474
Mus	ANCESTRAL SPECIES	6	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT01060000253534	ENSGT00940000157326	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00950000182815.a.a.b	ENSGT00940000153661.a.b.a.b.a.b.b.a	ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474
Mus_A	ANCESTRAL SPECIES	8	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT01060000253534	ENSGT00940000157326	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00950000182815.a.a.b	ENSGT00940000153661.a.b.a.b.a.b.b.a	ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474
Mus_B	ANCESTRAL SPECIES	6	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT01060000253534	ENSGT00940000157326	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00950000182815.a.a.b	ENSGT00940000153661.a.b.a.b.a.b.b.a	ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474
Mouse	MODERN SPECIES	17	Wrn (ENSMUSG00000031583)	Nrg1 (ENSMUSG00000118541)	Nrg1 (ENSMUSG00000062991)	Fut10 (ENSMUSG00000046152)	Mak16 (ENSMUSG00000031578)	Tti2 (ENSMUSG00000031577)	Rnf122 (ENSMUSG00000039328)	Dusp26 (ENSMUSG00000039661)	Unc5d (ENSMUSG00000063626)	Poteg (ENSMUSG00000063932)	Gm45861 (ENSMUSG00000110333)	Chrna6 (ENSMUSG00000031491)	Chrnb3 (ENSMUSG00000031492)	Eif4ebp1 (ENSMUSG00000031490)	Adrb3 (ENSMUSG00000031489)	Got1l1 (ENSMUSG00000039720) ##22	Rab11fip1 (ENSMUSG00000031488)	Brf2 (ENSMUSG00000031487)	Adgra2 (ENSMUSG00000031486)	Plpbp (ENSMUSG00000031485)	Erlin2 (ENSMUSG00000031483) ##13	Zfp703 (ENSMUSG00000085795)	Thap1 (ENSMUSG00000037214)	Gm45692 (ENSMUSG00000109850)	Rnf170 (ENSMUSG00000013878)	Hook3 (ENSMUSG00000037234)	Fnta (ENSMUSG00000015994)	Pomk (ENSMUSG00000037251)	Hgsnat (ENSMUSG00000037260)	Kcnu1 (ENSMUSG00000031576)	Ash2l (ENSMUSG00000031575)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000006260	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT00940000157326	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00950000182815.a.a.b	ENSGT00940000153661.a.b.a.b.a.b.b.a	ENSGT00940000158062	ENSGT00940000156892	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00550000074935	ENSGT00390000004945	ENSGT00390000001491.a	ENSGT00940000161817	ENSGT00390000010474
Steppe mouse	MODERN SPECIES	276				ENSMSIG00000030103	ENSMSIG00000030101	ENSMSIG00000030091	ENSMSIG00000030090	Fut10 (ENSMSIG00000030089)	Mak16 (ENSMSIG00000030085)	Tti2 (ENSMSIG00000030083)	Rnf122 (ENSMSIG00000030078)	Dusp26 (ENSMSIG00000030077)	ENSMSIG00000030072	Eif4ebp1 (ENSMSIG00000030071)	Adrb3 (ENSMSIG00000030070)	Got1l1 (ENSMSIG00000030066) ##22	Rab11fip1 (ENSMSIG00000030062)	Brf2 (ENSMSIG00000030061)	Adgra2 (ENSMSIG00000030051)	Plpbp (ENSMSIG00000030040)	ENSMSIG00000030037	Erlin2 (ENSMSIG00000030036) ##13	Zfp703 (ENSMSIG00000030035)	ENSMSIG00000030028	Thap1 (ENSMSIG00000030026)	Rnf170 (ENSMSIG00000030010)	Hook3 (ENSMSIG00000029994)	Fnta (ENSMSIG00000029987)	Pomk (ENSMSIG00000029984)	Hgsnat (ENSMSIG00000029980)	Kcnu1 (ENSMSIG00000029849)
spretus	MODERN SPECIES	17	Purg (MGP_SPRETEiJ_G0032080)	Wrn (MGP_SPRETEiJ_G0032079)	MGP_SPRETEiJ_G0032078	MGP_SPRETEiJ_G0032077	Fut10 (MGP_SPRETEiJ_G0032076)	Mak16 (MGP_SPRETEiJ_G0032075)	Tti2 (MGP_SPRETEiJ_G0032074)	Rnf122 (MGP_SPRETEiJ_G0032073)	Dusp26 (MGP_SPRETEiJ_G0032072)	Unc5d (MGP_SPRETEiJ_G0032071)	Poteg (MGP_SPRETEiJ_G0032070)	Chrna6 (MGP_SPRETEiJ_G0032069)	Chrnb3 (MGP_SPRETEiJ_G0032068)	Eif4ebp1 (MGP_SPRETEiJ_G0032067)	Adrb3 (MGP_SPRETEiJ_G0032066)	Got1l1 (MGP_SPRETEiJ_G0032065) ##22	MGP_SPRETEiJ_G0032064	Brf2 (MGP_SPRETEiJ_G0032063)	Adgra2 (MGP_SPRETEiJ_G0032062)	Plpbp (MGP_SPRETEiJ_G0032061)	Erlin2 (MGP_SPRETEiJ_G0032060) ##13	Zfp703 (MGP_SPRETEiJ_G0032059)	Thap1 (MGP_SPRETEiJ_G0032058)	Rnf170 (MGP_SPRETEiJ_G0032057)	Hook3 (MGP_SPRETEiJ_G0032056)	Fnta (MGP_SPRETEiJ_G0032055)	Pomk (MGP_SPRETEiJ_G0032054)	Hgsnat (MGP_SPRETEiJ_G0032053)	Kcnu1 (MGP_SPRETEiJ_G0032052)	Ash2l (MGP_SPRETEiJ_G0032051)	Star (MGP_SPRETEiJ_G0032050)
Ryukyu mouse	MODERN SPECIES	17	Wrn (MGP_CAROLIEiJ_G0030961)	MGP_CAROLIEiJ_G0030960	MGP_CAROLIEiJ_G0030959	Fut10 (MGP_CAROLIEiJ_G0030958)	Mak16 (MGP_CAROLIEiJ_G0030957)	Tti2 (MGP_CAROLIEiJ_G0030956)	Rnf122 (MGP_CAROLIEiJ_G0030955)	Dusp26 (MGP_CAROLIEiJ_G0030954)	Unc5d (MGP_CAROLIEiJ_G0030953)	Poteg (MGP_CAROLIEiJ_G0030952)	Chrna6 (MGP_CAROLIEiJ_G0030951)	Chrnb3 (MGP_CAROLIEiJ_G0030950)	MGP_CAROLIEiJ_G0030949	Eif4ebp1 (MGP_CAROLIEiJ_G0030948)	Adrb3 (MGP_CAROLIEiJ_G0030947)	Got1l1 (MGP_CAROLIEiJ_G0030946) ##22	Rab11fip1 (MGP_CAROLIEiJ_G0030945)	Brf2 (MGP_CAROLIEiJ_G0030944)	Adgra2 (MGP_CAROLIEiJ_G0030943)	Plpbp (MGP_CAROLIEiJ_G0030942)	Erlin2 (MGP_CAROLIEiJ_G0030941) ##13	Zfp703 (MGP_CAROLIEiJ_G0030940)	Thap1 (MGP_CAROLIEiJ_G0030939)	Rnf170 (MGP_CAROLIEiJ_G0030938)	Hook3 (MGP_CAROLIEiJ_G0030937)	Fnta (MGP_CAROLIEiJ_G0030936)	Pomk (MGP_CAROLIEiJ_G0030935)	Hgsnat (MGP_CAROLIEiJ_G0030934)	MGP_CAROLIEiJ_G0030933	Ash2l (MGP_CAROLIEiJ_G0030932)	Star (MGP_CAROLIEiJ_G0030931)
Shrew mouse	MODERN SPECIES	10	Purg (MGP_PahariEiJ_G0021431)	Wrn (MGP_PahariEiJ_G0021430)	MGP_PahariEiJ_G0021429	MGP_PahariEiJ_G0021428	Fut10 (MGP_PahariEiJ_G0021427)	Mak16 (MGP_PahariEiJ_G0021426)	Tti2 (MGP_PahariEiJ_G0021425)	Rnf122 (MGP_PahariEiJ_G0021424)	Dusp26 (MGP_PahariEiJ_G0021423)	Unc5d (MGP_PahariEiJ_G0021422)	Poteg (MGP_PahariEiJ_G0021421)	Chrna6 (MGP_PahariEiJ_G0021420)	Chrnb3 (MGP_PahariEiJ_G0021419)	Eif4ebp1 (MGP_PahariEiJ_G0021418)	Adrb3 (MGP_PahariEiJ_G0021417)	Got1l1 (MGP_PahariEiJ_G0021416) ##22	MGP_PahariEiJ_G0021415	Brf2 (MGP_PahariEiJ_G0021414)	Adgra2 (MGP_PahariEiJ_G0021413)	Plpbp (MGP_PahariEiJ_G0021412)	Erlin2 (MGP_PahariEiJ_G0021411) ##13	Zfp703 (MGP_PahariEiJ_G0021410)	Thap1 (MGP_PahariEiJ_G0021409)	Rnf170 (MGP_PahariEiJ_G0021408)	Hook3 (MGP_PahariEiJ_G0021407)	Fnta (MGP_PahariEiJ_G0021406)	Pomk (MGP_PahariEiJ_G0021405)	Hgsnat (MGP_PahariEiJ_G0021404)	Kcnu1 (MGP_PahariEiJ_G0021403)	Ash2l (MGP_PahariEiJ_G0021402)	Star (MGP_PahariEiJ_G0021401)
Rat	MODERN SPECIES	7	Fut10 (ENSRNOG00000050857)	Mak16 (ENSRNOG00000010783)	Tti2 (ENSRNOG00000023494)	Rnf122 (ENSRNOG00000023473)	Dusp26 (ENSRNOG00000011518)	Unc5d (ENSRNOG00000011858)	LOC120093063 (ENSRNOG00000063991)	LOC100911229 (ENSRNOG00000055604)	Smok (ENSRNOG00000022181)	Poteg (ENSRNOG00000012218)	Chrna6 (ENSRNOG00000012283)	Chrnb3 (ENSRNOG00000012448)	ENSRNOG00000065146	Eif4ebp1 (ENSRNOG00000012582)	Adrb3 (ENSRNOG00000012674)	Got1l1 (ENSRNOG00000038473) ##22	Rab11fip1 (ENSRNOG00000058940)	Brf2 (ENSRNOG00000012739)	Adgra2 (ENSRNOG00000012991)	Plpbp (ENSRNOG00000013751)	Erlin2 (ENSRNOG00000013763) ##13	Zfp703 (ENSRNOG00000014199)	LOC120097397 (ENSRNOG00000061711)	LOC108348409 (ENSRNOG00000038458)	Rps28-ps3 (ENSRNOG00000046342)	Thap1 (ENSRNOG00000056956)	Rnf170 (ENSRNOG00000069749)	AABR07026291.1 (ENSRNOG00000014275)	Fnta (ENSRNOG00000014462)	Pomk (ENSRNOG00000014628)	Hgsnat (ENSRNOG00000069796)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1770																Got1l1 (ENSNGAG00000013124) ##22
Lesser Egyptian jerboa	MODERN SPECIES	210											ENSJJAG00000010650	ENSJJAG00000010820	Chrnb3 (ENSJJAG00000011154)	Eif4ebp1 (ENSJJAG00000011773)	Adrb3 (ENSJJAG00000012860)	Got1l1 (ENSJJAG00000012944) ##22	ENSJJAG00000013090	ENSJJAG00000013958	ENSJJAG00000014054	Adgra2 (ENSJJAG00000014426)	ENSJJAG00000015194	Erlin2 (ENSJJAG00000015945) ##13	Zfp703 (ENSJJAG00000000098)	Thap1 (ENSJJAG00000000174)	ENSJJAG00000000335	Hook3 (ENSJJAG00000001521)	Fnta (ENSJJAG00000010498)	Pomk (ENSJJAG00000010616)	Hgsnat (ENSJJAG00000010840)	ENSJJAG00000011267	ENSJJAG00000012080
Kangaroo rat	MODERN SPECIES	323	Plekha2 (ENSDORG00000001523)	ENSDORG00000027298	Tacc1 (ENSDORG00000005743)	Fgfr1 (ENSDORG00000002210)	Letm2 (ENSDORG00000002201)	Nsd3 (ENSDORG00000007224)	Plpp5 (ENSDORG00000007223)	ENSDORG00000007219	Bag4 (ENSDORG00000024210)	Lsm1 (ENSDORG00000028172)	Star (ENSDORG00000003631)	Ash2l (ENSDORG00000003629)	Eif4ebp1 (ENSDORG00000024200)	ENSDORG00000028067	Adrb3 (ENSDORG00000010152)	Got1l1 (ENSDORG00000010150) ##22	ENSDORG00000023370	ENSDORG00000023243	ENSDORG00000014420	Adgra2 (ENSDORG00000014414)	Plpbp (ENSDORG00000004142)	ENSDORG00000024157	Erlin2 (ENSDORG00000028806) ##13	ENSDORG00000024529	ENSDORG00000027914	Unc5d (ENSDORG00000010421)	ENSDORG00000025809	Dusp26 (ENSDORG00000027180)	Rnf122 (ENSDORG00000015725)	Tti2 (ENSDORG00000024219)	ENSDORG00000015722
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00950000183082.b.a ##22
Pika	MODERN SPECIES	3208																ENSOPRG00000014372 ##22
Primates	ANCESTRAL SPECIES	25	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT01060000253534
Haplorrhini	ANCESTRAL SPECIES	27	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT01060000253534
Simiiformes	ANCESTRAL SPECIES	25	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01010000222693	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000163468
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164415	ENSGT00940000161817	ENSGT00940000164467	ENSGT00910000147475	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00940000158107	ENSGT00940000159152.d
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936.g	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164415	ENSGT00940000161817	ENSGT00910000147475	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01010000222693
Hominidae	ANCESTRAL SPECIES	15	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00910000148814	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936.g	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164415	ENSGT00940000161817	ENSGT00910000147475	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01010000222693	ENSGT00390000003878
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936.g	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00910000147475	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00390000009405.b.c.a.a.b.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01010000222693	ENSGT00390000003878
Gorilla	MODERN SPECIES	21	HTRA4 (ENSGGOG00000006044)	PLEKHA2 (ENSGGOG00000006037)	TACC1 (ENSGGOG00000011078)	ENSGGOG00000013992	FGFR1 (ENSGGOG00000013080)	LETM2 (ENSGGOG00000013075)	NSD3 (ENSGGOG00000011894)	PLPP5 (ENSGGOG00000026288)	DDHD2 (ENSGGOG00000004008)	BAG4 (ENSGGOG00000000933)	LSM1 (ENSGGOG00000022658)	STAR (ENSGGOG00000005787)	ASH2L (ENSGGOG00000005777)	ENSGGOG00000024560	ADRB3 (ENSGGOG00000007578)	GOT1L1 (ENSGGOG00000014222) ##22	RAB11FIP1 (ENSGGOG00000007027)	BRF2 (ENSGGOG00000012892)	ADGRA2 (ENSGGOG00000012872)	PROSC (ENSGGOG00000012865)	ERLIN2 (ENSGGOG00000012855) ##13	ZNF703 (ENSGGOG00000011795)	KCNU1 (ENSGGOG00000011534)	ENSGGOG00000039034	UNC5D (ENSGGOG00000006788)	ENSGGOG00000025416	ENSGGOG00000037844	ENSGGOG00000039494	ENSGGOG00000028062	DUSP26 (ENSGGOG00000014340)	ENSGGOG00000013394
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a.bb	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936.g	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00910000147475	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00390000009405.b.c.a.a.b.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01010000222693	ENSGT00390000003878
Human	MODERN SPECIES	20	HTRA4 (ENSG00000169495)	PLEKHA2 (ENSG00000169499)	TACC1 (ENSG00000147526)	FGFR1 (ENSG00000077782)	LETM2 (ENSG00000165046)	NSD3 (ENSG00000147548)	PLPP5 (ENSG00000147535)	DDHD2 (ENSG00000085788)	BAG4 (ENSG00000156735)	LSM1 (ENSG00000175324)	STAR (ENSG00000147465)	ASH2L (ENSG00000129691)	EIF4EBP1 (ENSG00000187840)	ADRB3 (ENSG00000188778)	ENSG00000285880	GOT1L1 (ENSG00000169154) ##22	RAB11FIP1 (ENSG00000156675)	BRF2 (ENSG00000104221)	ADGRA2 (ENSG00000020181)	PLPBP (ENSG00000147471)	ERLIN2 (ENSG00000147475) ##13	ZNF703 (ENSG00000183779)	KCNU1 (ENSG00000215262)	UNC5D (ENSG00000156687)	DUSP26 (ENSG00000133878)	RNF122 (ENSG00000133874)	MAK16 (ENSG00000198042)	TTI2 (ENSG00000129696)	FUT10 (ENSG00000172728)	ENSG00000286131	NRG1 (ENSG00000157168)
Pan	ANCESTRAL SPECIES	30			ENSGT00390000014107.a.b.x	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a.bb	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936.g	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00910000147475	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00390000009405.b.c.a.a.b.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01010000222693	ENSGT00390000003878
Bonobo	MODERN SPECIES	21	PLEKHA2 (ENSPPAG00000038502)	TACC1 (ENSPPAG00000024009)	ENSPPAG00000034773	ENSPPAG00000031316	FGFR1 (ENSPPAG00000031305)	LETM2 (ENSPPAG00000018862)	NSD3 (ENSPPAG00000010979)	PLPP5 (ENSPPAG00000027872)	DDHD2 (ENSPPAG00000027729)	BAG4 (ENSPPAG00000041761)	LSM1 (ENSPPAG00000032279)	STAR (ENSPPAG00000011074)	ASH2L (ENSPPAG00000042076)	EIF4EBP1 (ENSPPAG00000036659)	ADRB3 (ENSPPAG00000033560)	GOT1L1 (ENSPPAG00000036644) ##22	RAB11FIP1 (ENSPPAG00000040181)	BRF2 (ENSPPAG00000032845)	ADGRA2 (ENSPPAG00000041460)	PLPBP (ENSPPAG00000037503)	ERLIN2 (ENSPPAG00000034728) ##13	ZNF703 (ENSPPAG00000016835)	KCNU1 (ENSPPAG00000037711)	ENSPPAG00000033059	UNC5D (ENSPPAG00000042090)	ENSPPAG00000033684	ENSPPAG00000002988	DUSP26 (ENSPPAG00000039450)	RNF122 (ENSPPAG00000039012)	TTI2 (ENSPPAG00000033190)	MAK16 (ENSPPAG00000035102)
Chimpanzee	MODERN SPECIES	21	TACC1 (ENSPTRG00000020178)	ENSPTRG00000031009	LINC03042 (ENSPTRG00000023971)	FGFR1 (ENSPTRG00000020176)	ENSPTRG00000046606	LETM2 (ENSPTRG00000020174)	NSD3 (ENSPTRG00000020173)	PLPP5 (ENSPTRG00000020172)	DDHD2 (ENSPTRG00000020171)	BAG4 (ENSPTRG00000020170)	LSM1 (ENSPTRG00000020169)	STAR (ENSPTRG00000020168)	ASH2L (ENSPTRG00000020167)	EIF4EBP1 (ENSPTRG00000022700)	ADRB3 (ENSPTRG00000024086)	GOT1L1 (ENSPTRG00000049157) ##22	RAB11FIP1 (ENSPTRG00000020164)	BRF2 (ENSPTRG00000020163)	ADGRA2 (ENSPTRG00000020161)	PLPBP (ENSPTRG00000020160)	ERLIN2 (ENSPTRG00000020158) ##13	ZNF703 (ENSPTRG00000020156)	KCNU1 (ENSPTRG00000033774)	UNC5D (ENSPTRG00000020154)	ENSPTRG00000049285	ENSPTRG00000048545	DUSP26 (ENSPTRG00000020152)	RNF122 (ENSPTRG00000020151)	ENSPTRG00000045131	TTI2 (ENSPTRG00000020150)	MAK16 (ENSPTRG00000020149)
Orangutan	MODERN SPECIES	21	TACC1 (ENSPPYG00000018528)	ENSPPYG00000018527	FGFR1 (ENSPPYG00000018526)	ENSPPYG00000033888	LETM2 (ENSPPYG00000018525)	NSD3 (ENSPPYG00000018524)	ENSPPYG00000031672	ENSPPYG00000018523	DDHD2 (ENSPPYG00000029398)	BAG4 (ENSPPYG00000018522)	ENSPPYG00000018521	STAR (ENSPPYG00000018520)	ASH2L (ENSPPYG00000018519)	ENSPPYG00000018518	ADRB3 (ENSPPYG00000018517)	GOT1L1 (ENSPPYG00000018516) ##22	RAB11FIP1 (ENSPPYG00000018515)	BRF2 (ENSPPYG00000018514)	ADGRA2 (ENSPPYG00000018513)	PLPBP (ENSPPYG00000018512)	ENSPPYG00000018511	ERLIN2 (ENSPPYG00000018510) ##13	ENSPPYG00000038829	ZNF703 (ENSPPYG00000039446)	ENSPPYG00000036181	KCNU1 (ENSPPYG00000018507)	ENSPPYG00000032867	UNC5D (ENSPPYG00000018506)	ENSPPYG00000033233	DUSP26 (ENSPPYG00000018499)	RNF122 (ENSPPYG00000040815)
Gibbon	MODERN SPECIES	23	ENSNLEG00000012330	FGFR1 (ENSNLEG00000012322)	ENSNLEG00000032942	LETM2 (ENSNLEG00000012312)	NSD3 (ENSNLEG00000012273)	PLPP5 (ENSNLEG00000012268)	ENSNLEG00000033548	ENSNLEG00000012254	BAG4 (ENSNLEG00000012246)	LSM1 (ENSNLEG00000029390)	STAR (ENSNLEG00000012221)	ASH2L (ENSNLEG00000012198)	ENSNLEG00000029385	ENSNLEG00000031037	ADRB3 (ENSNLEG00000019123)	ENSNLEG00000012197 ##22	RAB11FIP1 (ENSNLEG00000012194)	BRF2 (ENSNLEG00000012188)	ADGRA2 (ENSNLEG00000012179)	ENSNLEG00000029110	PLPBP (ENSNLEG00000012176)	ENSNLEG00000019152	ERLIN2 (ENSNLEG00000035437) ##13	ZNF703 (ENSNLEG00000034021)	ENSNLEG00000031461	KCNU1 (ENSNLEG00000012134)	ENSNLEG00000012133	UNC5D (ENSNLEG00000012128)	ENSNLEG00000031873	DUSP26 (ENSNLEG00000028790)	RNF122 (ENSNLEG00000012113)
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164415	ENSGT00940000161817	ENSGT00940000164467	ENSGT00910000147475	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00940000158107	ENSGT00940000159152.d
Rhinopithecus	ANCESTRAL SPECIES	200	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164415	ENSGT00940000161817	ENSGT00950000182815.a.a.b
Black snub-nosed monkey	MODERN SPECIES	1461						ENSRBIG00000028798	PLPP5 (ENSRBIG00000037208)	ENSRBIG00000025751	ENSRBIG00000042396	BAG4 (ENSRBIG00000041251)	LSM1 (ENSRBIG00000027449)	STAR (ENSRBIG00000032155)	ASH2L (ENSRBIG00000042585)	ENSRBIG00000029887	ADRB3 (ENSRBIG00000024958)	GOT1L1 (ENSRBIG00000019279) ##22	RAB11FIP1 (ENSRBIG00000037446)	BRF2 (ENSRBIG00000028771)	ADGRA2 (ENSRBIG00000034856)	PLPBP (ENSRBIG00000034575)	ERLIN2 (ENSRBIG00000036630) ##13	ZNF703 (ENSRBIG00000034050)	ENSRBIG00000043127	KCNU1 (ENSRBIG00000042719)
Golden snub-nosed monkey	MODERN SPECIES	2522	HTRA4 (ENSRROG00000038661)	PLEKHA2 (ENSRROG00000042975)	TACC1 (ENSRROG00000037986)	ENSRROG00000013360	FGFR1 (ENSRROG00000036369)	LETM2 (ENSRROG00000041615)	NSD3 (ENSRROG00000011900)	PLPP5 (ENSRROG00000044623)	DDHD2 (ENSRROG00000040399)	BAG4 (ENSRROG00000041100)	LSM1 (ENSRROG00000036074)	STAR (ENSRROG00000000053)	ASH2L (ENSRROG00000030250)	EIF4EBP1 (ENSRROG00000045656)	ADRB3 (ENSRROG00000009579)	GOT1L1 (ENSRROG00000034572) ##22	RAB11FIP1 (ENSRROG00000035596)	BRF2 (ENSRROG00000028838)	ADGRA2 (ENSRROG00000030508)	PLPBP (ENSRROG00000024765)	ERLIN2 (ENSRROG00000005102) ##13	ZNF703 (ENSRROG00000044359)
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932.h	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164415	ENSGT00940000161817	ENSGT00940000164467	ENSGT00910000147475	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00940000158107	ENSGT00940000159152.d
Vervet Monkey	MODERN SPECIES	27	TM2D2 (ENSCSAG00000015378)	HTRA4 (ENSCSAG00000015386)	PLEKHA2 (ENSCSAG00000015396)	TACC1 (ENSCSAG00000015401)	FGFR1 (ENSCSAG00000015409)	LETM2 (ENSCSAG00000015415)	NSD3 (ENSCSAG00000015427)	PLPP5 (ENSCSAG00000015437)	DDHD2 (ENSCSAG00000015470)	BAG4 (ENSCSAG00000015482)	LSM1 (ENSCSAG00000015485)	STAR (ENSCSAG00000015488)	ASH2L (ENSCSAG00000015493)	ENSCSAG00000015504	ADRB3 (ENSCSAG00000015507)	GOT1L1 (ENSCSAG00000015519) ##22	RAB11FIP1 (ENSCSAG00000015528)	BRF2 (ENSCSAG00000015533)	ADGRA2 (ENSCSAG00000015581)	PLPBP (ENSCSAG00000015619)	ENSCSAG00000018532	ERLIN2 (ENSCSAG00000015667) ##13	ZNF703 (ENSCSAG00000015685)	ENSCSAG00000015693	KCNU1 (ENSCSAG00000015733)	ENSCSAG00000015761	UNC5D (ENSCSAG00000015773)	DUSP26 (ENSCSAG00000015780)	RNF122 (ENSCSAG00000015784)	TTI2 (ENSCSAG00000015786)	FUT10 (ENSCSAG00000015793)
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932.h	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164415	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859
Macaca	ANCESTRAL SPECIES	14	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00940000168967	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932.h	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00390000003628.b.c.b.a.a.b	ENSGT01100000263494.a.b.b.a	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878
Macaca_a	ANCESTRAL SPECIES	16	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00940000161627.a.a.a.b.b.b.b.a.b.b.a.b.a	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932.h	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT01100000263539.b.a.a.a.a.a.a.b.a.d	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164709.a.b.b.a.a.b.b.a.a.a.a.a.a	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.b.b.a.a.b.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000164709.a.b.b.a.b.a.a.a.a.a.b.a.b	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.b.b.b.a.a.a	ENSGT00940000158107	ENSGT00940000159152.d
Rhesus	MODERN SPECIES	18	ENSMMUG00000051162	TACC1 (ENSMMUG00000010152)	FGFR1 (ENSMMUG00000022478)	ENSMMUG00000050518	LETM2 (ENSMMUG00000022476)	ENSMMUG00000064844	NSD3 (ENSMMUG00000001091)	PLPP5 (ENSMMUG00000019958)	DDHD2 (ENSMMUG00000013777)	BAG4 (ENSMMUG00000013775)	STAR (ENSMMUG00000013676)	ASH2L (ENSMMUG00000013675)	EIF4EBP1 (ENSMMUG00000060575)	ADRB3 (ENSMMUG00000005876)	ENSMMUG00000061014	GOT1L1 (ENSMMUG00000047166) ##22	ENSMMUG00000052821	RAB11FIP1 (ENSMMUG00000063888)	ENSMMUG00000062392	BRF2 (ENSMMUG00000003212)	ADGRA2 (ENSMMUG00000003204)	ENSMMUG00000039223	ERLIN2 (ENSMMUG00000000943) ##13	ZNF703 (ENSMMUG00000001635)	ENSMMUG00000057375	ENSMMUG00000051867	KCNU1 (ENSMMUG00000000200)	ENSMMUG00000050940	UNC5D (ENSMMUG00000010638)	ENSMMUG00000050508	ENSMMUG00000060856
Crab-eating macaque	MODERN SPECIES	18	ENSMFAG00000049714	TACC1 (ENSMFAG00000031600)	FGFR1 (ENSMFAG00000034537)	ENSMFAG00000063640	LETM2 (ENSMFAG00000043712)	NSD3 (ENSMFAG00000034989)	PLPP5 (ENSMFAG00000003982)	DDHD2 (ENSMFAG00000032613)	ENSMFAG00000061961	BAG4 (ENSMFAG00000032088)	ENSMFAG00000064254	STAR (ENSMFAG00000031135)	ASH2L (ENSMFAG00000001965)	EIF4EBP1 (ENSMFAG00000000356)	ADRB3 (ENSMFAG00000039383)	GOT1L1 (ENSMFAG00000003470) ##22	RAB11FIP1 (ENSMFAG00000059688)	ENSMFAG00000042170	BRF2 (ENSMFAG00000044757)	ADGRA2 (ENSMFAG00000042939)	ENSMFAG00000048781	ENSMFAG00000040242	ERLIN2 (ENSMFAG00000030735) ##13	ENSMFAG00000049404	ENSMFAG00000023544	ENSMFAG00000047705	KCNU1 (ENSMFAG00000014847)	UNC5D (ENSMFAG00000039158)	ENSMFAG00000057219	ENSMFAG00000064543	ENSMFAG00000061278
Pig-tailed macaque	MODERN SPECIES	539	TM2D2 (ENSMNEG00000040380)	HTRA4 (ENSMNEG00000005256)	PLEKHA2 (ENSMNEG00000029799)	TACC1 (ENSMNEG00000027975)	FGFR1 (ENSMNEG00000033546)	LETM2 (ENSMNEG00000020896)	NSD3 (ENSMNEG00000034169)	PLPP5 (ENSMNEG00000011089)	DDHD2 (ENSMNEG00000036810)	BAG4 (ENSMNEG00000035342)	ENSMNEG00000029302	STAR (ENSMNEG00000040234)	ASH2L (ENSMNEG00000034548)	EIF4EBP1 (ENSMNEG00000032437)	ADRB3 (ENSMNEG00000036727)	GOT1L1 (ENSMNEG00000039148) ##22	RAB11FIP1 (ENSMNEG00000032675)	BRF2 (ENSMNEG00000043480)	ADGRA2 (ENSMNEG00000033077)	PLPBP (ENSMNEG00000033436)	ERLIN2 (ENSMNEG00000040921) ##13	ENSMNEG00000025939	ZNF703 (ENSMNEG00000034137)	ENSMNEG00000031758	KCNU1 (ENSMNEG00000031911)	ENSMNEG00000039919	UNC5D (ENSMNEG00000037206)	ENSMNEG00000036397	DUSP26 (ENSMNEG00000042910)	RNF122 (ENSMNEG00000010426)	TTI2 (ENSMNEG00000041704)
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932.h	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164415	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00390000008767.a.a.a.a.h	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859
Olive baboon	MODERN SPECIES	18	PLEKHA2 (ENSPANG00000014536)	ENSPANG00000019847	ENSPANG00000048310	FGFR1 (ENSPANG00000012485)	LETM2 (ENSPANG00000005869)	NSD3 (ENSPANG00000009526)	PLPP5 (ENSPANG00000005870)	DDHD2 (ENSPANG00000019041)	BAG4 (ENSPANG00000018593)	LSM1 (ENSPANG00000008814)	STAR (ENSPANG00000007579)	ASH2L (ENSPANG00000001037)	EIF4EBP1 (ENSPANG00000024757)	ADRB3 (ENSPANG00000000535)	ENSPANG00000037065	GOT1L1 (ENSPANG00000032594) ##22	RAB11FIP1 (ENSPANG00000000534)	BRF2 (ENSPANG00000006699)	ADGRA2 (ENSPANG00000004191)	ENSPANG00000039746	PLPBP (ENSPANG00000018508)	ERLIN2 (ENSPANG00000006700) ##13	ZNF703 (ENSPANG00000009528)	ENSPANG00000032942	KCNU1 (ENSPANG00000016902)	UNC5D (ENSPANG00000011907)	ENSPANG00000046556	DUSP26 (ENSPANG00000039103)	RNF122 (ENSPANG00000024478)	TTI2 (ENSPANG00000009003)	MAK16 (ENSPANG00000010420)
Cercopithecinae_d	ANCESTRAL SPECIES	137	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.k	ENSGT00390000010474	ENSGT00940000159932.h	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000164415	ENSGT00940000161817
Sooty mangabey	MODERN SPECIES	164	TM2D2 (ENSCATG00000044110)	HTRA4 (ENSCATG00000043700)	PLEKHA2 (ENSCATG00000043759)	TACC1 (ENSCATG00000035857)	FGFR1 (ENSCATG00000043191)	LETM2 (ENSCATG00000032897)	NSD3 (ENSCATG00000034947)	PLPP5 (ENSCATG00000040560)	DDHD2 (ENSCATG00000034586)	BAG4 (ENSCATG00000021878)	LSM1 (ENSCATG00000020377)	STAR (ENSCATG00000000828)	ASH2L (ENSCATG00000030295)	EIF4EBP1 (ENSCATG00000044432)	ADRB3 (ENSCATG00000042740)	GOT1L1 (ENSCATG00000040567) ##22	RAB11FIP1 (ENSCATG00000033278)	BRF2 (ENSCATG00000029274)	ADGRA2 (ENSCATG00000044839)	PLPBP (ENSCATG00000035226)	ENSCATG00000023295	ERLIN2 (ENSCATG00000044574) ##13	ZNF703 (ENSCATG00000034395)	ENSCATG00000030688	KCNU1 (ENSCATG00000033641)
Drill	MODERN SPECIES	172	TM2D2 (ENSMLEG00000000064)	HTRA4 (ENSMLEG00000032158)	PLEKHA2 (ENSMLEG00000007869)	TACC1 (ENSMLEG00000006911)	FGFR1 (ENSMLEG00000029758)	LETM2 (ENSMLEG00000032198)	NSD3 (ENSMLEG00000029132)	PLPP5 (ENSMLEG00000038958)	DDHD2 (ENSMLEG00000043014)	BAG4 (ENSMLEG00000005970)	LSM1 (ENSMLEG00000034535)	STAR (ENSMLEG00000032519)	ASH2L (ENSMLEG00000036471)	EIF4EBP1 (ENSMLEG00000002855)	ADRB3 (ENSMLEG00000028954)	GOT1L1 (ENSMLEG00000008772) ##22	ENSMLEG00000039773	BRF2 (ENSMLEG00000043202)	ADGRA2 (ENSMLEG00000039846)	PLPBP (ENSMLEG00000037006)	ERLIN2 (ENSMLEG00000032265) ##13	KCNU1 (ENSMLEG00000030957)	LRMDA (ENSMLEG00000043196)
Platyrrhini	ANCESTRAL SPECIES	29	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o.a	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01010000222693	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000163468.l.a
Cebidae	ANCESTRAL SPECIES	30	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000002197.o.a	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000163468.l.a	ENSGT00940000160287
Marmoset	MODERN SPECIES	4	TM2D2 (ENSCJAG00000043754)	HTRA4 (ENSCJAG00000002329)	PLEKHA2 (ENSCJAG00000002336)	TACC1 (ENSCJAG00000002356)	FGFR1 (ENSCJAG00000002394)	LETM2 (ENSCJAG00000002468)	NSD3 (ENSCJAG00000002489)	PLPP5 (ENSCJAG00000002560)	DDHD2 (ENSCJAG00000002575)	BAG4 (ENSCJAG00000002619)	LSM1 (ENSCJAG00000048015)	STAR (ENSCJAG00000002634)	ASH2L (ENSCJAG00000002642)	EIF4EBP1 (ENSCJAG00000077730)	ADRB3 (ENSCJAG00000002674)	GOT1L1 (ENSCJAG00000002687) ##22	RAB11FIP1 (ENSCJAG00000002706)	BRF2 (ENSCJAG00000084614)	ADGRA2 (ENSCJAG00000002733)	PLPBP (ENSCJAG00000002756)	ENSCJAG00000077348	ERLIN2 (ENSCJAG00000002768) ##13	ZNF703 (ENSCJAG00000002785)	KCNU1 (ENSCJAG00000002801)	UNC5D (ENSCJAG00000002818)	ENSCJAG00000062072	ENSCJAG00000074530	ENSCJAG00000072236	DUSP26 (ENSCJAG00000007554)	RNF122 (ENSCJAG00000040195)	TTI2 (ENSCJAG00000007580)
Cebidae_a	ANCESTRAL SPECIES	53	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00390000010799.u.b.a.b.a.b.b.b	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000163468.l.a	ENSGT00940000160287	ENSGT00940000157326
Bolivian squirrel monkey	MODERN SPECIES	138	HTRA4 (ENSSBOG00000022865)	PLEKHA2 (ENSSBOG00000022273)	TACC1 (ENSSBOG00000011637)	FGFR1 (ENSSBOG00000029785)	LETM2 (ENSSBOG00000022934)	NSD3 (ENSSBOG00000006899)	PLPP5 (ENSSBOG00000023364)	ENSSBOG00000025662	DDHD2 (ENSSBOG00000025531)	BAG4 (ENSSBOG00000029106)	ENSSBOG00000023572	STAR (ENSSBOG00000021082)	ASH2L (ENSSBOG00000020507)	EIF4EBP1 (ENSSBOG00000000833)	ADRB3 (ENSSBOG00000032593)	GOT1L1 (ENSSBOG00000028741) ##22	RAB11FIP1 (ENSSBOG00000025908)	BRF2 (ENSSBOG00000019054)	ADGRA2 (ENSSBOG00000019697)	PLPBP (ENSSBOG00000028049)	ERLIN2 (ENSSBOG00000023196) ##13	ZNF703 (ENSSBOG00000016100)	KCNU1 (ENSSBOG00000028528)	UNC5D (ENSSBOG00000008965)	DUSP26 (ENSSBOG00000023011)	RNF122 (ENSSBOG00000009425)	TTI2 (ENSSBOG00000028473)	MAK16 (ENSSBOG00000030325)	ENSSBOG00000025871	FUT10 (ENSSBOG00000027017)	NRG1 (ENSSBOG00000024083)
Capuchin	MODERN SPECIES	5	HTRA4 (ENSCCAG00000008963)	PLEKHA2 (ENSCCAG00000033235)	TACC1 (ENSCCAG00000036680)	FGFR1 (ENSCCAG00000026012)	LETM2 (ENSCCAG00000016799)	NSD3 (ENSCCAG00000026700)	PLPP5 (ENSCCAG00000023804)	ENSCCAG00000037183	DDHD2 (ENSCCAG00000022393)	BAG4 (ENSCCAG00000022538)	LSM1 (ENSCCAG00000037171)	STAR (ENSCCAG00000019087)	ASH2L (ENSCCAG00000023270)	EIF4EBP1 (ENSCCAG00000036139)	ADRB3 (ENSCCAG00000024671)	GOT1L1 (ENSCCAG00000017099) ##22	RAB11FIP1 (ENSCCAG00000036294)	BRF2 (ENSCCAG00000028995)	ADGRA2 (ENSCCAG00000031406)	PLPBP (ENSCCAG00000030336)	ERLIN2 (ENSCCAG00000034425) ##13	ZNF703 (ENSCCAG00000029427)	KCNU1 (ENSCCAG00000036196)	UNC5D (ENSCCAG00000020858)	DUSP26 (ENSCCAG00000027044)	ENSCCAG00000034508	TTI2 (ENSCCAG00000030166)	MAK16 (ENSCCAG00000025382)	ENSCCAG00000024345	FUT10 (ENSCCAG00000030510)	NRG1 (ENSCCAG00000035317)
Mas night monkey	MODERN SPECIES	866	PLEKHA2 (ENSANAG00000033902)	TACC1 (ENSANAG00000028289)	FGFR1 (ENSANAG00000021095)	LETM2 (ENSANAG00000023708)	ENSANAG00000024784	NSD3 (ENSANAG00000027966)	PLPP5 (ENSANAG00000031794)	DDHD2 (ENSANAG00000026112)	BAG4 (ENSANAG00000037921)	LSM1 (ENSANAG00000027785)	STAR (ENSANAG00000038385)	ASH2L (ENSANAG00000027393)	ENSANAG00000031508	ENSANAG00000028425	ADRB3 (ENSANAG00000034143)	GOT1L1 (ENSANAG00000034735) ##22	ENSANAG00000022141	BRF2 (ENSANAG00000029346)	ADGRA2 (ENSANAG00000020778)	PLPBP (ENSANAG00000028406)	ERLIN2 (ENSANAG00000025720) ##13	ENSANAG00000019514	ZNF703 (ENSANAG00000025164)	ENSANAG00000026059	KCNU1 (ENSANAG00000037568)	UNC5D (ENSANAG00000030465)	DUSP26 (ENSANAG00000016438)	RNF122 (ENSANAG00000022008)	ENSANAG00000005930	TTI2 (ENSANAG00000020405)	MAK16 (ENSANAG00000030954)
Tarsier	MODERN SPECIES	6961	TM2D2 (ENSTSYG00000013690)	ENSTSYG00000029669	PLEKHA2 (ENSTSYG00000009829)	TACC1 (ENSTSYG00000001623)	FGFR1 (ENSTSYG00000013976)	LETM2 (ENSTSYG00000013971)	NSD3 (ENSTSYG00000000534)	PLPP5 (ENSTSYG00000000533)	DDHD2 (ENSTSYG00000000530)	BAG4 (ENSTSYG00000010429)	LSM1 (ENSTSYG00000010394)	STAR (ENSTSYG00000005424)	ENSTSYG00000005358	EIF4EBP1 (ENSTSYG00000029045)	ADRB3 (ENSTSYG00000027215)	GOT1L1 (ENSTSYG00000029726) ##22	RAB11FIP1 (ENSTSYG00000001057)	BRF2 (ENSTSYG00000036604)	ADGRA2 (ENSTSYG00000013625)	PROSC (ENSTSYG00000014228)	ERLIN2 (ENSTSYG00000034534) ##13
Strepsirrhini	ANCESTRAL SPECIES	25	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Lemuriformes	ANCESTRAL SPECIES	32	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326	ENSGT00940000159168
Lemuriformes_a	ANCESTRAL SPECIES	168	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b
Coquerels sifaka	MODERN SPECIES	491	PLEKHA2 (ENSPCOG00000023226)	TACC1 (ENSPCOG00000021240)	FGFR1 (ENSPCOG00000006878)	LETM2 (ENSPCOG00000020969)	NSD3 (ENSPCOG00000015898)	ENSPCOG00000009273	ENSPCOG00000015374	PLPP5 (ENSPCOG00000027973)	DDHD2 (ENSPCOG00000022497)	BAG4 (ENSPCOG00000028269)	ENSPCOG00000020901	STAR (ENSPCOG00000020381)	ASH2L (ENSPCOG00000024571)	ENSPCOG00000021010	ADRB3 (ENSPCOG00000018496)	GOT1L1 (ENSPCOG00000027367) ##22	ENSPCOG00000021023	BRF2 (ENSPCOG00000017719)	ADGRA2 (ENSPCOG00000019310)	PLPBP (ENSPCOG00000009357)	ERLIN2 (ENSPCOG00000016064) ##13	ZNF703 (ENSPCOG00000024266)	KCNU1 (ENSPCOG00000019016)
Greater bamboo lemur	MODERN SPECIES	1360				FGFR1 (ENSPSMG00000013787)	LETM2 (ENSPSMG00000013383)	NSD3 (ENSPSMG00000013238)	PLPP5 (ENSPSMG00000013150)	DDHD2 (ENSPSMG00000013088)	ENSPSMG00000013053	BAG4 (ENSPSMG00000013045)	LSM1 (ENSPSMG00000013032)	STAR (ENSPSMG00000013025)	ASH2L (ENSPSMG00000012978)	EIF4EBP1 (ENSPSMG00000012914)	ADRB3 (ENSPSMG00000012903)	GOT1L1 (ENSPSMG00000012901) ##22
Bushbaby	MODERN SPECIES	217	ADAM9 (ENSOGAG00000015343)	TM2D2 (ENSOGAG00000015341)	HTRA4 (ENSOGAG00000015334)	PLEKHA2 (ENSOGAG00000015330)	TACC1 (ENSOGAG00000031281)	FGFR1 (ENSOGAG00000014695)	LETM2 (ENSOGAG00000014686)	NSD3 (ENSOGAG00000014670)	DDHD2 (ENSOGAG00000014663)	BAG4 (ENSOGAG00000015162)	LSM1 (ENSOGAG00000015161)	STAR (ENSOGAG00000015158)	ASH2L (ENSOGAG00000015154)	EIF4EBP1 (ENSOGAG00000032329)	ADRB3 (ENSOGAG00000028016)	GOT1L1 (ENSOGAG00000007060) ##22	ENSOGAG00000028363	BRF2 (ENSOGAG00000005734)	ADGRA2 (ENSOGAG00000005727)	PLPBP (ENSOGAG00000005725)	ERLIN2 (ENSOGAG00000000966) ##13	ZNF703 (ENSOGAG00000029076)	KCNU1 (ENSOGAG00000025257)	ENSOGAG00000026306	UNC5D (ENSOGAG00000000753)	ENSOGAG00000030365	DUSP26 (ENSOGAG00000006065)	RNF122 (ENSOGAG00000003902)	TTI2 (ENSOGAG00000003393)	MAK16 (ENSOGAG00000024416)	FUT10 (ENSOGAG00000027030)
Laurasiatheria	ANCESTRAL SPECIES	24	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326
Eulipotyphla	ANCESTRAL SPECIES	1881															ENSGT00940000158663	ENSGT00950000183082.b.a ##22
Common shrew	MODERN SPECIES	11594															ADRB3 (ENSSARG00000004970)	GOT1L1 (ENSSARG00000004981) ##22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h
Artiodactyla	ANCESTRAL SPECIES	24	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000157326.g.a
Suina	ANCESTRAL SPECIES	3	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00940000164579	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h
Pig	MODERN SPECIES	6	ENSSSCG00000045902	ENSSSCG00000059411	ENSSSCG00000042802	ENSSSCG00000015814	FGFR1 (ENSSSCG00000015815)	LETM2 (ENSSSCG00000015816)	NSD3 (ENSSSCG00000015820)	PLPP5 (ENSSSCG00000015819)	DDHD2 (ENSSSCG00000015818)	BAG4 (ENSSSCG00000034468)	LSM1 (ENSSSCG00000057499)	STAR (ENSSSCG00000034942)	ASH2L (ENSSSCG00000021898)	EIF4EBP1 (ENSSSCG00000022301)	ADRB3 (ENSSSCG00000015821)	GOT1L1 (ENSSSCG00000038325) ##22	ENSSSCG00000015823	BRF2 (ENSSSCG00000040833)	ADGRA2 (ENSSSCG00000015825)	ENSSSCG00000015826	ERLIN2 (ENSSSCG00000039480) ##13	ZNF703 (ENSSSCG00000015828)	KCNU1 (ENSSSCG00000029131)	ENSSSCG00000036361	UNC5D (ENSSSCG00000015830)	ENSSSCG00000054605	ENSSSCG00000042616	ENSSSCG00000036767	NRG1 (ENSSSCG00000015839)	ENSSSCG00000059617	ENSSSCG00000062031
Chacoan peccary	MODERN SPECIES	87	PLEKHA2 (ENSCWAG00000005082)	TACC1 (ENSCWAG00000005224)	FGFR1 (ENSCWAG00000005457)	ENSCWAG00000005840	ENSCWAG00000007739	NSD3 (ENSCWAG00000007807)	PLPP5 (ENSCWAG00000007975)	DDHD2 (ENSCWAG00000008068)	BAG4 (ENSCWAG00000008178)	LSM1 (ENSCWAG00000008264)	STAR (ENSCWAG00000008337)	ASH2L (ENSCWAG00000008424)	EIF4EBP1 (ENSCWAG00000008577)	ADRB3 (ENSCWAG00000008614)	ENSCWAG00000008656	GOT1L1 (ENSCWAG00000008696) ##22	ENSCWAG00000008777	ENSCWAG00000008874	BRF2 (ENSCWAG00000008908)	ADGRA2 (ENSCWAG00000008950)	PLPBP (ENSCWAG00000009039)	ERLIN2 (ENSCWAG00000009091) ##13	ZNF703 (ENSCWAG00000009220)	KCNU1 (ENSCWAG00000009297)	ENSCWAG00000009850	UNC5D (ENSCWAG00000009952)	ENSCWAG00000011251	DUSP26 (ENSCWAG00000011282)	RNF122 (ENSCWAG00000011329)	TTI2 (ENSCWAG00000011378)	MAK16 (ENSCWAG00000011452)
Artiodactyla_a	ANCESTRAL SPECIES	25	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000157326.g.a
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000157326.g.a
Cetacea	ANCESTRAL SPECIES	22	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d.c	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168
Odontoceti	ANCESTRAL SPECIES	23	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d.c	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168
Odontoceti_a	ANCESTRAL SPECIES	25	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00410000029246	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d.c	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168
Odontoceti_b	ANCESTRAL SPECIES	23	ENSGT00940000156239	ENSGT00730000111181	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928.l	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d.c	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168
Monodontidae	ANCESTRAL SPECIES	24	ENSGT00940000156239	ENSGT00730000111181	ENSGT00940000158064	ENSGT00390000004856.w.a.a.b.b.a.b.a	ENSGT00940000156991	ENSGT00940000155860	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928.l	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00550000074801.g.a.h.a	ENSGT00530000063666.a.a.b	ENSGT01000000222158	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d.c	ENSGT00390000003878	ENSGT00390000012859
Narwhal	MODERN SPECIES	303	ADAM9 (ENSMMNG00015003464)	TM2D2 (ENSMMNG00015003515)	PLEKHA2 (ENSMMNG00015003553)	ENSMMNG00015003625	TACC1 (ENSMMNG00015003670)	FGFR1 (ENSMMNG00015003878)	NSD3 (ENSMMNG00015004172)	DDHD2 (ENSMMNG00015004229)	PLPP5 (ENSMMNG00015004279)	LSM1 (ENSMMNG00015004311)	STAR (ENSMMNG00015004326)	ASH2L (ENSMMNG00015004349)	EIF4EBP1 (ENSMMNG00015004370)	ENSMMNG00015004379	ENSMMNG00015004398	GOT1L1 (ENSMMNG00015004409) ##22	RAB11FIP1 (ENSMMNG00015004435)	BRF2 (ENSMMNG00015004455)	ADGRA2 (ENSMMNG00015004469)	PROSC (ENSMMNG00015009319)	ERLIN2 (ENSMMNG00015009325) ##13	ZNF703 (ENSMMNG00015009328)	ENSMMNG00015009335	ENSMMNG00015009339	ENSMMNG00015009345	KCNU1 (ENSMMNG00015009357)	UNC5D (ENSMMNG00015009411)	DUSP26 (ENSMMNG00015009481)	ENSMMNG00015009493	TTI2 (ENSMMNG00015009516)	MAK16 (ENSMMNG00015009532)
Beluga whale	MODERN SPECIES	30	PLEKHA2 (ENSDLEG00000007021)	ENSDLEG00000007009	TACC1 (ENSDLEG00000006959)	FGFR1 (ENSDLEG00000006950)	NSD3 (ENSDLEG00000006893)	ENSDLEG00000006883	ENSDLEG00000006879	DDHD2 (ENSDLEG00000006831)	BAG4 (ENSDLEG00000006809)	LSM1 (ENSDLEG00000006800)	STAR (ENSDLEG00000006783)	ASH2L (ENSDLEG00000006756)	EIF4EBP1 (ENSDLEG00000006741)	ENSDLEG00000006739	ADRB3 (ENSDLEG00000006726)	GOT1L1 (ENSDLEG00000006714) ##22	RAB11FIP1 (ENSDLEG00000006703)	BRF2 (ENSDLEG00000006699)	ADGRA2 (ENSDLEG00000006683)	ENSDLEG00000006669	ENSDLEG00000006662 ##13	ENSDLEG00000006649	ERLIN2 (ENSDLEG00000006637) ##13	ZNF703 (ENSDLEG00000006630)	ENSDLEG00000006625	ENSDLEG00000006623	ENSDLEG00000006621	KCNU1 (ENSDLEG00000006530)	ENSDLEG00000006512	UNC5D (ENSDLEG00000006491)	DUSP26 (ENSDLEG00000006471)
Vaquita	MODERN SPECIES	13	TM2D2 (ENSPSNG00000013491)	PLEKHA2 (ENSPSNG00000013373)	TACC1 (ENSPSNG00000021744)	ENSPSNG00000021721	ENSPSNG00000021703	FGFR1 (ENSPSNG00000021573)	ENSPSNG00000021526	NSD3 (ENSPSNG00000021464)	PLPP5 (ENSPSNG00000021393)	DDHD2 (ENSPSNG00000021344)	BAG4 (ENSPSNG00000021310)	LSM1 (ENSPSNG00000021283)	STAR (ENSPSNG00000021245)	ASH2L (ENSPSNG00000021194)	EIF4EBP1 (ENSPSNG00000021157)	GOT1L1 (ENSPSNG00000021108) ##22	RAB11FIP1 (ENSPSNG00000021048)	BRF2 (ENSPSNG00000021020)	ADGRA2 (ENSPSNG00000020959)	ENSPSNG00000020923	ERLIN2 (ENSPSNG00000020819) ##13	ZNF703 (ENSPSNG00000020787)	KCNU1 (ENSPSNG00000020641)	UNC5D (ENSPSNG00000020089)	DUSP26 (ENSPSNG00000020003)	ENSPSNG00000019973	TTI2 (ENSPSNG00000019937)	MAK16 (ENSPSNG00000019895)	FUT10 (ENSPSNG00000019854)	NRG1 (ENSPSNG00000019274)	WRN (ENSPSNG00000019114)
Dolphin	MODERN SPECIES	2308																GOT1L1 (ENSTTRG00000016944) ##22	RAB11FIP1 (ENSTTRG00000016943)	BRF2 (ENSTTRG00000016942)	ADGRA2 (ENSTTRG00000016941)	PROSC (ENSTTRG00000016940)	ERLIN2 (ENSTTRG00000016939) ##13	ZNF703 (ENSTTRG00000016938)
Blue whale	MODERN SPECIES	13	ENSBMSG00010017351	ADAM18 (ENSBMSG00010017105)	IDO1 (ENSBMSG00010017035)	IDO2 (ENSBMSG00010016916)	TCIM (ENSBMSG00010016902)	ZMAT4 (ENSBMSG00010016846)	ENSBMSG00010016790	ENSBMSG00010016765	ENSBMSG00010016749	ENSBMSG00010016720	ENSBMSG00010016638	ENSBMSG00010016606	ENSBMSG00010016541	EIF4EBP1 (ENSBMSG00010016512)	ADRB3 (ENSBMSG00010016494)	GOT1L1 (ENSBMSG00010016452) ##22	ENSBMSG00010016415	BRF2 (ENSBMSG00010016388)	ADGRA2 (ENSBMSG00010016355)	PLPBP (ENSBMSG00010016317)	ERLIN2 (ENSBMSG00010016263) ##13	ZNF703 (ENSBMSG00010016237)	ENSBMSG00010016207	ENSBMSG00010016178	KCNU1 (ENSBMSG00010016059)	ENSBMSG00010016024	ENSBMSG00010016002	ENSBMSG00010015995	UNC5D (ENSBMSG00010015617)	ENSBMSG00010015521	DUSP26 (ENSBMSG00010015488)
Pecora	ANCESTRAL SPECIES	31	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000157326.g.a
Percora_a	ANCESTRAL SPECIES	31	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000157326.g.a
Bovidae	ANCESTRAL SPECIES	30	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000157326.g.a
Caprinae	ANCESTRAL SPECIES	31	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936.i	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859.c	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168
Rambouillet Sheep	MODERN SPECIES	18	ENSOARG00020022534	ADAM9 (ENSOARG00020022343)	TM2D2 (ENSOARG00020022306)	HTRA4 (ENSOARG00020022248)	PLEKHA2 (ENSOARG00020022148)	FGFR1 (ENSOARG00020021552)	NSD3 (ENSOARG00020021051)	PLPP5 (ENSOARG00020020908)	DDHD2 (ENSOARG00020020772)	BAG4 (ENSOARG00020020671)	LSM1 (ENSOARG00020020588)	STAR (ENSOARG00020020539)	ASH2L (ENSOARG00020020322)	EIF4EBP1 (ENSOARG00020020286)	ADRB3 (ENSOARG00020020243)	GOT1L1 (ENSOARG00020020184) ##22	BRF2 (ENSOARG00020019985)	ADGRA2 (ENSOARG00020019544)	PLPBP (ENSOARG00020019471)	ERLIN2 (ENSOARG00020019361) ##13	ZNF703 (ENSOARG00020019326)	KCNU1 (ENSOARG00020014695)	UNC5D (ENSOARG00020011472)	DUSP26 (ENSOARG00020011341)	RNF122 (ENSOARG00020011268)	TTI2 (ENSOARG00020010997)	MAK16 (ENSOARG00020010915)	FUT10 (ENSOARG00020010547)	NRG1 (ENSOARG00020007228)	PURG (ENSOARG00020006924)	TEX15 (ENSOARG00020006861)
Goat	MODERN SPECIES	19	HTRA4 (ENSCHIG00000014811)	PLEKHA2 (ENSCHIG00000025414)	TACC1 (ENSCHIG00000024372)	FGFR1 (ENSCHIG00000011006)	LETM2 (ENSCHIG00000015288)	NSD3 (ENSCHIG00000025553)	ENSCHIG00000015709	DDHD2 (ENSCHIG00000011925)	ENSCHIG00000020428	ENSCHIG00000003073	LSM1 (ENSCHIG00000013194)	STAR (ENSCHIG00000017362)	ASH2L (ENSCHIG00000021355)	EIF4EBP1 (ENSCHIG00000019087)	ADRB3 (ENSCHIG00000013874)	GOT1L1 (ENSCHIG00000015182) ##22	RAB11FIP1 (ENSCHIG00000024656)	BRF2 (ENSCHIG00000005511)	ADGRA2 (ENSCHIG00000017052)	PLPBP (ENSCHIG00000023647)	ERLIN2 (ENSCHIG00000026177) ##13	ZNF703 (ENSCHIG00000021954)	KCNU1 (ENSCHIG00000010549)	ENSCHIG00000015679	UNC5D (ENSCHIG00000023904)	ENSCHIG00000021604	ENSCHIG00000010271	DUSP26 (ENSCHIG00000019000)	RNF122 (ENSCHIG00000007153)	TTI2 (ENSCHIG00000027034)	ENSCHIG00000017057
Bovinae	ANCESTRAL SPECIES	36	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.m	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00930000152728.a	ENSGT00390000014618.b	ENSGT00390000015655.a.h	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287
Bos	ANCESTRAL SPECIES	33	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.m	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00930000152728.a	ENSGT00390000014618.b	ENSGT00390000015655.a.h	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287
Bos_b	ANCESTRAL SPECIES	35	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00390000018141.i.a.b.b.b.a.b.a.b.a.a.b.a	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.m	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00930000152728.a	ENSGT00390000014618.b	ENSGT00390000015655.a.h	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287
Hybrid Bos Indicus	MODERN SPECIES	19	HTRA4 (ENSBIXG00005008659)	PLEKHA2 (ENSBIXG00005008709)	ENSBIXG00005008728	TACC1 (ENSBIXG00005005790)	FGFR1 (ENSBIXG00005009047)	LETM2 (ENSBIXG00005009166)	NSD3 (ENSBIXG00005000470)	PLPP5 (ENSBIXG00005009350)	DDHD2 (ENSBIXG00005000492)	BAG4 (ENSBIXG00005000497)	LSM1 (ENSBIXG00005009477)	ENSBIXG00005000511	ASH2L (ENSBIXG00005009534)	EIF4EBP1 (ENSBIXG00005009563)	ADRB3 (ENSBIXG00005009584)	GOT1L1 (ENSBIXG00005009605) ##22	RAB11FIP1 (ENSBIXG00005009676)	BRF2 (ENSBIXG00005000552)	ADGRA2 (ENSBIXG00005000601)	PLPBP (ENSBIXG00005007420)	ZNF703 (ENSBIXG00005009907)	ENSBIXG00005009948	ENSBIXG00005006988	KCNU1 (ENSBIXG00005000755)	UNC5D (ENSBIXG00005010252)	DUSP26 (ENSBIXG00005000848)	RNF122 (ENSBIXG00005000855)	TTI2 (ENSBIXG00005000873)	MAK16 (ENSBIXG00005010420)	FUT10 (ENSBIXG00005000890)	ENSBIXG00005010504
Cow	MODERN SPECIES	19	HTRA4 (ENSBTAG00000019532)	PLEKHA2 (ENSBTAG00000003509)	ENSBTAG00000050567	TACC1 (ENSBTAG00000004238)	FGFR1 (ENSBTAG00000015457)	LETM2 (ENSBTAG00000015444)	NSD3 (ENSBTAG00000001529)	PLPP5 (ENSBTAG00000027635)	DDHD2 (ENSBTAG00000013145)	BAG4 (ENSBTAG00000013143)	LSM1 (ENSBTAG00000001612)	STAR (ENSBTAG00000033345)	ASH2L (ENSBTAG00000000978)	EIF4EBP1 (ENSBTAG00000027654)	ADRB3 (ENSBTAG00000017981)	GOT1L1 (ENSBTAG00000016446) ##22	RAB11FIP1 (ENSBTAG00000011684)	BRF2 (ENSBTAG00000027665)	ADGRA2 (ENSBTAG00000008814)	PLPBP (ENSBTAG00000011075)	ERLIN2 (ENSBTAG00000017831) ##13	ENSBTAG00000053673	ZNF703 (ENSBTAG00000013943)	ENSBTAG00000033381	KCNU1 (ENSBTAG00000027118)	ENSBTAG00000005639	UNC5D (ENSBTAG00000010241)	DUSP26 (ENSBTAG00000016413)	RNF122 (ENSBTAG00000016411)	TTI2 (ENSBTAG00000015463)	MAK16 (ENSBTAG00000033504)
Bos_a	ANCESTRAL SPECIES	31	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477.m	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00930000152728.a	ENSGT00390000014618.b	ENSGT00390000015655.a.h	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287
Domestic yak	MODERN SPECIES	20	HTRA4 (ENSBGRG00000014990)	PLEKHA2 (ENSBGRG00000015187)	TACC1 (ENSBGRG00000015345)	ENSBGRG00000015777	FGFR1 (ENSBGRG00000015839)	ENSBGRG00000016869	NSD3 (ENSBGRG00000016971)	PLPP5 (ENSBGRG00000017327)	DDHD2 (ENSBGRG00000017720)	BAG4 (ENSBGRG00000017856)	LSM1 (ENSBGRG00000017979)	STAR (ENSBGRG00000018086)	ASH2L (ENSBGRG00000018247)	EIF4EBP1 (ENSBGRG00000018704)	ADRB3 (ENSBGRG00000018794)	GOT1L1 (ENSBGRG00000018830) ##22	RAB11FIP1 (ENSBGRG00000018911)	BRF2 (ENSBGRG00000019012)	ADGRA2 (ENSBGRG00000019095)	PLPBP (ENSBGRG00000019740)	ZNF703 (ENSBGRG00000019985)	ENSBGRG00000020413	ENSBGRG00000020449	KCNU1 (ENSBGRG00000020595)	UNC5D (ENSBGRG00000021584)	DUSP26 (ENSBGRG00000023452)	RNF122 (ENSBGRG00000023501)	TTI2 (ENSBGRG00000023566)	MAK16 (ENSBGRG00000023705)	FUT10 (ENSBGRG00000023882)	NRG1 (ENSBGRG00000024055)
Wild yak	MODERN SPECIES	1866											LSM1 (ENSBMUG00000006252)	STAR (ENSBMUG00000006256)	ASH2L (ENSBMUG00000006301)	EIF4EBP1 (ENSBMUG00000006339)	ADRB3 (ENSBMUG00000006349)	GOT1L1 (ENSBMUG00000006355) ##22	ENSBMUG00000006378	BRF2 (ENSBMUG00000006390)	ADGRA2 (ENSBMUG00000006441)	PLPBP (ENSBMUG00000006476)	ERLIN2 (ENSBMUG00000006500) ##13	ENSBMUG00000006515	ENSBMUG00000006522	KCNU1 (ENSBMUG00000006546)
American bison	MODERN SPECIES	3033	ENSBBBG00000000457	PLEKHA2 (ENSBBBG00000000476)	ENSBBBG00000023127	ENSBBBG00000023054	FGFR1 (ENSBBBG00000023016)	ENSBBBG00000022744	ENSBBBG00000022733	NSD3 (ENSBBBG00000022712)	PLPP5 (ENSBBBG00000005955)	DDHD2 (ENSBBBG00000022520)	BAG4 (ENSBBBG00000022475)	LSM1 (ENSBBBG00000022447)	ENSBBBG00000022430	ASH2L (ENSBBBG00000022400)	EIF4EBP1 (ENSBBBG00000022321)	GOT1L1 (ENSBBBG00000007203) ##22	ENSBBBG00000022298	BRF2 (ENSBBBG00000007474)	ADGRA2 (ENSBBBG00000022242)	PLPBP (ENSBBBG00000022164)	ERLIN2 (ENSBBBG00000022150) ##13	ENSBBBG00000022093	ZNF703 (ENSBBBG00000022089)	ENSBBBG00000022075	KCNU1 (ENSBBBG00000022052)	UNC5D (ENSBBBG00000022009)	DUSP26 (ENSBBBG00000021760)	RNF122 (ENSBBBG00000021747)	ENSBBBG00000006919	TTI2 (ENSBBBG00000021704)	MAK16 (ENSBBBG00000005754)
Siberian musk deer	MODERN SPECIES	142	PLEKHA2 (ENSMMSG00000004313)	TACC1 (ENSMMSG00000004195)	ENSMMSG00000004179	FGFR1 (ENSMMSG00000004064)	ENSMMSG00000003990	ENSMMSG00000003973	NSD3 (ENSMMSG00000003925)	PLPP5 (ENSMMSG00000003906)	DDHD2 (ENSMMSG00000003864)	BAG4 (ENSMMSG00000003835)	LSM1 (ENSMMSG00000003818)	STAR (ENSMMSG00000003794)	ASH2L (ENSMMSG00000003750)	ENSMMSG00000003731	ADRB3 (ENSMMSG00000003717)	GOT1L1 (ENSMMSG00000003694) ##22	RAB11FIP1 (ENSMMSG00000003663)	BRF2 (ENSMMSG00000003642)	ADGRA2 (ENSMMSG00000003606)	PLPBP (ENSMMSG00000003580)	ERLIN2 (ENSMMSG00000003553) ##13	ZNF703 (ENSMMSG00000003532)	KCNU1 (ENSMMSG00000003481)	UNC5D (ENSMMSG00000003053)	ENSMMSG00000002966	DUSP26 (ENSMMSG00000002953)	RNF122 (ENSMMSG00000002937)	TTI2 (ENSMMSG00000002910)	MAK16 (ENSMMSG00000002887)	ENSMMSG00000002873	FUT10 (ENSMMSG00000002866)
Yarkand deer	MODERN SPECIES	25	HTRA4 (ENSCHYG00000024394)	PLEKHA2 (ENSCHYG00000024297)	TACC1 (ENSCHYG00000024013)	ENSCHYG00000023973	FGFR1 (ENSCHYG00000023184)	LETM2 (ENSCHYG00000023062)	NSD3 (ENSCHYG00000022872)	PLPP5 (ENSCHYG00000022838)	DDHD2 (ENSCHYG00000022769)	BAG4 (ENSCHYG00000022682)	LSM1 (ENSCHYG00000022614)	STAR (ENSCHYG00000022561)	ASH2L (ENSCHYG00000022353)	EIF4EBP1 (ENSCHYG00000022296)	ADRB3 (ENSCHYG00000022213)	GOT1L1 (ENSCHYG00000022122) ##22	RAB11FIP1 (ENSCHYG00000022023)	BRF2 (ENSCHYG00000021983)	ADGRA2 (ENSCHYG00000021519)	ENSCHYG00000021435	ERLIN2 (ENSCHYG00000021368) ##13	ZNF703 (ENSCHYG00000021337)	KCNU1 (ENSCHYG00000021033)	UNC5D (ENSCHYG00000018964)	ENSCHYG00000018822	ENSCHYG00000018760	ENSCHYG00000018716	DUSP26 (ENSCHYG00000018592)	ENSCHYG00000018522	TTI2 (ENSCHYG00000018334)	MAK16 (ENSCHYG00000018167)
Camelidae	ANCESTRAL SPECIES	35	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168	ENSGT00950000183162.b
Arabian camel	MODERN SPECIES	18	ENSCDRG00005011288	PLEKHA2 (ENSCDRG00005011341)	TACC1 (ENSCDRG00005011845)	ENSCDRG00005013185	FGFR1 (ENSCDRG00005013254)	LETM2 (ENSCDRG00005014040)	NSD3 (ENSCDRG00005014137)	PLPP5 (ENSCDRG00005014397)	DDHD2 (ENSCDRG00005014500)	BAG4 (ENSCDRG00005014600)	LSM1 (ENSCDRG00005014675)	STAR (ENSCDRG00005014766)	ASH2L (ENSCDRG00005014868)	EIF4EBP1 (ENSCDRG00005015372)	ADRB3 (ENSCDRG00005015401)	GOT1L1 (ENSCDRG00005015427) ##22	RAB11FIP1 (ENSCDRG00005015503)	BRF2 (ENSCDRG00005015581)	ADGRA2 (ENSCDRG00005015621)	PROSC (ENSCDRG00005015675)	ERLIN2 (ENSCDRG00005015749) ##13	ENSCDRG00005015843	KCNU1 (ENSCDRG00005015886)	UNC5D (ENSCDRG00005016132)	DUSP26 (ENSCDRG00005017276)	RNF122 (ENSCDRG00005017324)	TTI2 (ENSCDRG00005017367)	MAK16 (ENSCDRG00005017434)	FUT10 (ENSCDRG00005017483)	ENSCDRG00005017518	NRG1 (ENSCDRG00005017594)
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h
Caniformia	ANCESTRAL SPECIES	28	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h
Caniformia_b	ANCESTRAL SPECIES	30	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h
Ursidae	ANCESTRAL SPECIES	38	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168
Ursus	ANCESTRAL SPECIES	173	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b
Polar bear	MODERN SPECIES	136	TM2D2 (ENSUMAG00000009293)	ENSUMAG00000009289	PLEKHA2 (ENSUMAG00000009277)	TACC1 (ENSUMAG00000009265)	FGFR1 (ENSUMAG00000009245)	LETM2 (ENSUMAG00000009233)	NSD3 (ENSUMAG00000009213)	PLPP5 (ENSUMAG00000009200)	DDHD2 (ENSUMAG00000009162)	ENSUMAG00000009150	BAG4 (ENSUMAG00000009138)	LSM1 (ENSUMAG00000009132)	STAR (ENSUMAG00000009128)	ASH2L (ENSUMAG00000009123)	EIF4EBP1 (ENSUMAG00000009121)	GOT1L1 (ENSUMAG00000009116) ##22	ENSUMAG00000009114	ENSUMAG00000009112	BRF2 (ENSUMAG00000009108)	ADGRA2 (ENSUMAG00000009075)	PLPBP (ENSUMAG00000009071)	ERLIN2 (ENSUMAG00000009068) ##13	KCNU1 (ENSUMAG00000009025)	ENSUMAG00000009014	UNC5D (ENSUMAG00000008925)
American black bear	MODERN SPECIES	673														EIF4EBP1 (ENSUAMG00000023500)	ADRB3 (ENSUAMG00000023503)	GOT1L1 (ENSUAMG00000023506) ##22	RAB11FIP1 (ENSUAMG00000023508)	BRF2 (ENSUAMG00000023512)	ADGRA2 (ENSUAMG00000023526)	PLPBP (ENSUAMG00000023757)	ERLIN2 (ENSUAMG00000023758) ##13	ZNF703 (ENSUAMG00000023759)
Giant Panda	MODERN SPECIES	9	HTRA4 (ENSAMEG00000015441)	PLEKHA2 (ENSAMEG00000015457)	TACC1 (ENSAMEG00000015472)	FGFR1 (ENSAMEG00000015496)	LETM2 (ENSAMEG00000015583)	NSD3 (ENSAMEG00000015590)	PLPP5 (ENSAMEG00000011236)	DDHD2 (ENSAMEG00000011159)	ENSAMEG00000026335	BAG4 (ENSAMEG00000011149)	LSM1 (ENSAMEG00000011141)	STAR (ENSAMEG00000011108)	ASH2L (ENSAMEG00000011076)	ENSAMEG00000024475	ADRB3 (ENSAMEG00000011054)	ENSAMEG00000025090 ##22	ENSAMEG00000029032	BRF2 (ENSAMEG00000027854)	ADGRA2 (ENSAMEG00000010973)	PLPBP (ENSAMEG00000010965)	ERLIN2 (ENSAMEG00000010922) ##13	ZNF703 (ENSAMEG00000030395)	KCNU1 (ENSAMEG00000010781)	ENSAMEG00000019204	UNC5D (ENSAMEG00000010697)	ENSAMEG00000008481	ENSAMEG00000008472
Mustelinae	ANCESTRAL SPECIES	80	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474.l	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00960000189849	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h
Ferret	MODERN SPECIES	226	ENSMPUG00000009618	PLEKHA2 (ENSMPUG00000009622)	TACC1 (ENSMPUG00000009634)	FGFR1 (ENSMPUG00000009649)	ENSMPUG00000009663	ENSMPUG00000009668	NSD3 (ENSMPUG00000009674)	PLPP5 (ENSMPUG00000009690)	DDHD2 (ENSMPUG00000009748)	BAG4 (ENSMPUG00000009858)	LSM1 (ENSMPUG00000009883)	STAR (ENSMPUG00000009903)	ASH2L (ENSMPUG00000009911)	EIF4EBP1 (ENSMPUG00000009919)	ADRB3 (ENSMPUG00000009926)	GOT1L1 (ENSMPUG00000009929) ##22	RAB11FIP1 (ENSMPUG00000010000)	BRF2 (ENSMPUG00000010006)	ADGRA2 (ENSMPUG00000010013)	PLPBP (ENSMPUG00000010028)	ERLIN2 (ENSMPUG00000010035) ##13	ENSMPUG00000010044	ZNF703 (ENSMPUG00000010048)	ENSMPUG00000010051	ENSMPUG00000010067	ENSMPUG00000010076	KCNU1 (ENSMPUG00000010081)	ENSMPUG00000019078	UNC5D (ENSMPUG00000010096)	ENSMPUG00000010113	DUSP26 (ENSMPUG00000010124)
American mink	MODERN SPECIES	86	TM2D2 (ENSNVIG00000010391)	HTRA4 (ENSNVIG00000010418)	PLEKHA2 (ENSNVIG00000010446)	TACC1 (ENSNVIG00000010549)	FGFR1 (ENSNVIG00000010667)	LETM2 (ENSNVIG00000010875)	NSD3 (ENSNVIG00000010953)	PLPP5 (ENSNVIG00000011102)	DDHD2 (ENSNVIG00000011111)	BAG4 (ENSNVIG00000011180)	LSM1 (ENSNVIG00000011204)	STAR (ENSNVIG00000011221)	ENSNVIG00000011231	EIF4EBP1 (ENSNVIG00000011273)	ADRB3 (ENSNVIG00000011289)	GOT1L1 (ENSNVIG00000011304) ##22	RAB11FIP1 (ENSNVIG00000011334)	BRF2 (ENSNVIG00000011361)	ADGRA2 (ENSNVIG00000011390)	PROSC (ENSNVIG00000011453)	ENSNVIG00000011469	ERLIN2 (ENSNVIG00000011488) ##13	ZNF703 (ENSNVIG00000011581)	KCNU1 (ENSNVIG00000011599)	UNC5D (ENSNVIG00000011709)
Canidae	ANCESTRAL SPECIES	1	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155078.a.b.b.d	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168
Red fox	MODERN SPECIES	14	PLEKHA2 (ENSVVUG00000020237)	TACC1 (ENSVVUG00000020234)	ENSVVUG00000020232	FGFR1 (ENSVVUG00000020230)	LETM2 (ENSVVUG00000020223)	NSD3 (ENSVVUG00000020207)	PLPP5 (ENSVVUG00000020205)	DDHD2 (ENSVVUG00000020202)	ENSVVUG00000020199	BAG4 (ENSVVUG00000020194)	LSM1 (ENSVVUG00000020191)	STAR (ENSVVUG00000020188)	ASH2L (ENSVVUG00000020177)	EIF4EBP1 (ENSVVUG00000020168)	ADRB3 (ENSVVUG00000020166)	GOT1L1 (ENSVVUG00000020155) ##22	RAB11FIP1 (ENSVVUG00000020146)	BRF2 (ENSVVUG00000020139)	ADGRA2 (ENSVVUG00000020113)	PLPBP (ENSVVUG00000020083)	ERLIN2 (ENSVVUG00000020079) ##13	ZNF703 (ENSVVUG00000020077)	KCNU1 (ENSVVUG00000020067)	UNC5D (ENSVVUG00000020005)	ENSVVUG00000019971	ENSVVUG00000019968	DUSP26 (ENSVVUG00000019952)	RNF122 (ENSVVUG00000019943)	TTI2 (ENSVVUG00000019939)	MAK16 (ENSVVUG00000019933)	FUT10 (ENSVVUG00000019925)
Canis_lupus	ANCESTRAL SPECIES	29	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155078.a.b.b.d	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00980000199075	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168
Dingo	MODERN SPECIES	77	TACC1 (ENSCAFG00020002213)	ENSCAFG00020002185	FGFR1 (ENSCAFG00020002151)	LETM2 (ENSCAFG00020002133)	ENSCAFG00020002119	ENSCAFG00020002105	PLPP5 (ENSCAFG00020002099)	DDHD2 (ENSCAFG00020001880)	ENSCAFG00020001843	BAG4 (ENSCAFG00020001828)	LSM1 (ENSCAFG00020001822)	STAR (ENSCAFG00020001792)	ASH2L (ENSCAFG00020001781)	EIF4EBP1 (ENSCAFG00020001769)	ADRB3 (ENSCAFG00020001758)	GOT1L1 (ENSCAFG00020001729) ##22	ENSCAFG00020001706	BRF2 (ENSCAFG00020001701)	ADGRA2 (ENSCAFG00020001681)	PLPBP (ENSCAFG00020001617)	ERLIN2 (ENSCAFG00020001582) ##13	ZNF703 (ENSCAFG00020001578)	KCNU1 (ENSCAFG00020001467)	UNC5D (ENSCAFG00020001366)	ENSCAFG00020001353	DUSP26 (ENSCAFG00020001350)	RNF122 (ENSCAFG00020001343)	TTI2 (ENSCAFG00020001331)	MAK16 (ENSCAFG00020001324)	ENSCAFG00020001316	FUT10 (ENSCAFG00020001315)
Felidae	ANCESTRAL SPECIES	4	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00390000015489.q.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299
Panthera	ANCESTRAL SPECIES	5	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00390000015489.q.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00390000015489.q.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299
leopard	MODERN SPECIES	6	PLEKHA2 (ENSPPRG00000003475)	TACC1 (ENSPPRG00000002334)	FGFR1 (ENSPPRG00000012278)	LETM2 (ENSPPRG00000001610)	NSD3 (ENSPPRG00000022736)	PLPP5 (ENSPPRG00000022214)	DDHD2 (ENSPPRG00000018105)	ENSPPRG00000015083	BAG4 (ENSPPRG00000014488)	ENSPPRG00000014172	STAR (ENSPPRG00000013471)	ASH2L (ENSPPRG00000013177)	EIF4EBP1 (ENSPPRG00000008612)	ENSPPRG00000008494	ADRB3 (ENSPPRG00000008424)	GOT1L1 (ENSPPRG00000008235) ##22	ENSPPRG00000007377	BRF2 (ENSPPRG00000007107)	ADGRA2 (ENSPPRG00000006526)	PLPBP (ENSPPRG00000004434)	ERLIN2 (ENSPPRG00000004127) ##13	ZNF703 (ENSPPRG00000003092)	KCNU1 (ENSPPRG00000001511)	ENSPPRG00000022282	UNC5D (ENSPPRG00000021671)	ENSPPRG00000016166	DUSP26 (ENSPPRG00000009759)	RNF122 (ENSPPRG00000009660)	STMN4 (ENSPPRG00000009329)	TRIM35 (ENSPPRG00000008006)	PTK2B (ENSPPRG00000007277)
lion	MODERN SPECIES	4	TM2D2 (ENSPLOG00000003493)	HTRA4 (ENSPLOG00000003516)	PLEKHA2 (ENSPLOG00000003546)	TACC1 (ENSPLOG00000003599)	FGFR1 (ENSPLOG00000003738)	LETM2 (ENSPLOG00000003937)	NSD3 (ENSPLOG00000004012)	PLPP5 (ENSPLOG00000004125)	DDHD2 (ENSPLOG00000004150)	BAG4 (ENSPLOG00000004179)	LSM1 (ENSPLOG00000004194)	STAR (ENSPLOG00000004204)	ASH2L (ENSPLOG00000004233)	EIF4EBP1 (ENSPLOG00000004264)	ADRB3 (ENSPLOG00000004273)	GOT1L1 (ENSPLOG00000004290) ##22	RAB11FIP1 (ENSPLOG00000004304)	BRF2 (ENSPLOG00000004325)	ADGRA2 (ENSPLOG00000004358)	PLPBP (ENSPLOG00000004386)	ERLIN2 (ENSPLOG00000004395) ##13	ZNF703 (ENSPLOG00000004412)	KCNU1 (ENSPLOG00000004463)	ENSPLOG00000004508	UNC5D (ENSPLOG00000004558)	ENSPLOG00000004619	DUSP26 (ENSPLOG00000004624)	RNF122 (ENSPLOG00000004628)	STMN4 (ENSPLOG00000004643)	TRIM35 (ENSPLOG00000004657)	PTK2B (ENSPLOG00000004681)
Tiger	MODERN SPECIES	550	TM2D2 (ENSPTIG00000004094)	ENSPTIG00000004912	PLEKHA2 (ENSPTIG00000005707)	TACC1 (ENSPTIG00000008016)	FGFR1 (ENSPTIG00000016849)	LETM2 (ENSPTIG00000020741)	NSD3 (ENSPTIG00000021659)	PLPP5 (ENSPTIG00000007238)	DDHD2 (ENSPTIG00000008298)	BAG4 (ENSPTIG00000009307)	LSM1 (ENSPTIG00000010289)	STAR (ENSPTIG00000011689)	ASH2L (ENSPTIG00000012651)	EIF4EBP1 (ENSPTIG00000016464)	ADRB3 (ENSPTIG00000016724)	GOT1L1 (ENSPTIG00000017432) ##22	ENSPTIG00000018552	BRF2 (ENSPTIG00000019006)	ADGRA2 (ENSPTIG00000020237)	PLPBP (ENSPTIG00000007553)	ERLIN2 (ENSPTIG00000009337) ##13	KCNU1 (ENSPTIG00000012045)	ENSPTIG00000006279	UNC5D (ENSPTIG00000015078)	ENSPTIG00000006393	DUSP26 (ENSPTIG00000000562)	RNF122 (ENSPTIG00000003477)	STMN4 (ENSPTIG00000006056)	TRIM35 (ENSPTIG00000008311)	PTK2B (ENSPTIG00000009077)	CHRNA2 (ENSPTIG00000018878)
Cat	MODERN SPECIES	235	TM2D2 (ENSFCAG00000002593)	HTRA4 (ENSFCAG00000002591)	PLEKHA2 (ENSFCAG00000030276)	TACC1 (ENSFCAG00000024992)	FGFR1 (ENSFCAG00000013612)	LETM2 (ENSFCAG00000013610)	NSD3 (ENSFCAG00000013609)	PLPP5 (ENSFCAG00000043841)	DDHD2 (ENSFCAG00000013607)	BAG4 (ENSFCAG00000039640)	LSM1 (ENSFCAG00000039335)	STAR (ENSFCAG00000013604)	ASH2L (ENSFCAG00000013603)	EIF4EBP1 (ENSFCAG00000010425)	ADRB3 (ENSFCAG00000010422)	GOT1L1 (ENSFCAG00000015538) ##22	RAB11FIP1 (ENSFCAG00000028568)	BRF2 (ENSFCAG00000025130)	ADGRA2 (ENSFCAG00000015536)	PLPBP (ENSFCAG00000040705)	ERLIN2 (ENSFCAG00000015534) ##13	ZNF703 (ENSFCAG00000043801)	KCNU1 (ENSFCAG00000018954)	ENSFCAG00000038093	UNC5D (ENSFCAG00000005095)	ENSFCAG00000034993	DUSP26 (ENSFCAG00000040176)	RNF122 (ENSFCAG00000025628)	STMN4 (ENSFCAG00000014418)	TRIM35 (ENSFCAG00000025046)	PTK2B (ENSFCAG00000014420)
Laurasiatheria_c	ANCESTRAL SPECIES	26	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000157326.g.a
Chiroptera	ANCESTRAL SPECIES	32	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000157326.g.a
Microchiroptera	ANCESTRAL SPECIES	33	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000157326.g.a
Microbat	MODERN SPECIES	963	PLEKHA2 (ENSMLUG00000011191)	TACC1 (ENSMLUG00000001640)	FGFR1 (ENSMLUG00000001759)	LETM2 (ENSMLUG00000001740)	ENSMLUG00000028977	ENSMLUG00000010561	PLPP5 (ENSMLUG00000010530)	DDHD2 (ENSMLUG00000013445)	ENSMLUG00000028904	BAG4 (ENSMLUG00000025574)	LSM1 (ENSMLUG00000003734)	STAR (ENSMLUG00000003732)	ASH2L (ENSMLUG00000003723)	EIF4EBP1 (ENSMLUG00000007526)	ADRB3 (ENSMLUG00000007514)	GOT1L1 (ENSMLUG00000007485) ##22	RAB11FIP1 (ENSMLUG00000007472)	BRF2 (ENSMLUG00000030280)	ADGRA2 (ENSMLUG00000022283)	PLPBP (ENSMLUG00000007448)	ERLIN2 (ENSMLUG00000011778) ##13	ZNF703 (ENSMLUG00000011770)	ENSMLUG00000025710	ENSMLUG00000026031	ENSMLUG00000028845	UNC5D (ENSMLUG00000005073)	ENSMLUG00000024514	ENSMLUG00000027529	DUSP26 (ENSMLUG00000002772)	RNF122 (ENSMLUG00000012520)	TTI2 (ENSMLUG00000002764)
Greater horseshoe bat	MODERN SPECIES	22	HTRA4 (ENSRFEG00010001474)	PLEKHA2 (ENSRFEG00010001508)	TACC1 (ENSRFEG00010001569)	FGFR1 (ENSRFEG00010001714)	LETM2 (ENSRFEG00010001818)	NSD3 (ENSRFEG00010001897)	PLPP5 (ENSRFEG00010001960)	DDHD2 (ENSRFEG00010002002)	BAG4 (ENSRFEG00010002051)	LSM1 (ENSRFEG00010002086)	STAR (ENSRFEG00010002121)	ASH2L (ENSRFEG00010002223)	EIF4EBP1 (ENSRFEG00010002320)	ENSRFEG00010002335	ADRB3 (ENSRFEG00010002348)	GOT1L1 (ENSRFEG00010002367) ##22	RAB11FIP1 (ENSRFEG00010002395)	BRF2 (ENSRFEG00010002432)	ADGRA2 (ENSRFEG00010002481)	PLPBP (ENSRFEG00010002573)	ERLIN2 (ENSRFEG00010002625) ##13	ZNF703 (ENSRFEG00010002677)	KCNU1 (ENSRFEG00010002708)	UNC5D (ENSRFEG00010002856)	DUSP26 (ENSRFEG00010003012)	RNF122 (ENSRFEG00010003024)	TTI2 (ENSRFEG00010003057)	MAK16 (ENSRFEG00010003077)	FUT10 (ENSRFEG00010003099)	ENSRFEG00010003113	ENSRFEG00010003122
Megabat	MODERN SPECIES	2724							NSD3 (ENSPVAG00000006027)	PLPP5 (ENSPVAG00000006025)	DDHD2 (ENSPVAG00000006019)	BAG4 (ENSPVAG00000006018)	LSM1 (ENSPVAG00000006016)	STAR (ENSPVAG00000006015)	ASH2L (ENSPVAG00000006014)	EIF4EBP1 (ENSPVAG00000006013)	ADRB3 (ENSPVAG00000006012)	GOT1L1 (ENSPVAG00000006011) ##22	RAB11FIP1 (ENSPVAG00000006010)	BRF2 (ENSPVAG00000006008)	ADGRA2 (ENSPVAG00000006005)	PLPBP (ENSPVAG00000006004)	ERLIN2 (ENSPVAG00000006001) ##13	ZNF703 (ENSPVAG00000005996)
Equus	ANCESTRAL SPECIES	59	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064	ENSGT00940000156991	ENSGT00940000155860	ENSGT00950000183167.a.b.b.a	ENSGT00940000155355	ENSGT00940000159772	ENSGT00940000156808	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000155477	ENSGT00390000010474	ENSGT00940000159932	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00390000014666.a ##13	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h	ENSGT00940000159168
Donkey	MODERN SPECIES	11	PLEKHA2 (ENSEASG00005016636)	ENSEASG00005017900	TACC1 (ENSEASG00005016641)	FGFR1 (ENSEASG00005016646)	LETM2 (ENSEASG00005016656)	NSD3 (ENSEASG00005016657)	PLPP5 (ENSEASG00005031485)	DDHD2 (ENSEASG00005016672)	BAG4 (ENSEASG00005016675)	LSM1 (ENSEASG00005016677)	STAR (ENSEASG00005016681)	ENSEASG00005038661	ASH2L (ENSEASG00005016686)	EIF4EBP1 (ENSEASG00005032680)	ADRB3 (ENSEASG00005016692)	GOT1L1 (ENSEASG00005016694) ##22	RAB11FIP1 (ENSEASG00005016696)	BRF2 (ENSEASG00005016697)	ADGRA2 (ENSEASG00005016700)	PLPBP (ENSEASG00005016704)	ENSEASG00005016707 ##13	ENSEASG00005016710	ENSEASG00005031313	CHD2 (ENSEASG00005015526)	ENSEASG00005023664	FAM174B (ENSEASG00005033885)	ST8SIA2 (ENSEASG00005015432)	ENSEASG00005015429	ENSEASG00005015427	ENSEASG00005015400	KLHL25 (ENSEASG00005027542)
Horse	MODERN SPECIES	19	HTRA4 (ENSECAG00000012377)	PLEKHA2 (ENSECAG00000013320)	TACC1 (ENSECAG00000014842)	ENSECAG00000044496	FGFR1 (ENSECAG00000015006)	LETM2 (ENSECAG00000023758)	NSD3 (ENSECAG00000024114)	PLPP5 (ENSECAG00000001080)	DDHD2 (ENSECAG00000008062)	BAG4 (ENSECAG00000010407)	STAR (ENSECAG00000012746)	ASH2L (ENSECAG00000013970)	ENSECAG00000046093	EIF4EBP1 (ENSECAG00000015719)	ADRB3 (ENSECAG00000015780)	GOT1L1 (ENSECAG00000015852) ##22	RAB11FIP1 (ENSECAG00000016134)	BRF2 (ENSECAG00000052126)	ADGRA2 (ENSECAG00000000011)	PLPBP (ENSECAG00000009000)	ERLIN2 (ENSECAG00000009999) ##13	ZNF703 (ENSECAG00000011475)	KCNU1 (ENSECAG00000026836)	UNC5D (ENSECAG00000011901)	DUSP26 (ENSECAG00000015233)	RNF122 (ENSECAG00000015301)	TTI2 (ENSECAG00000016076)	MAK16 (ENSECAG00000016532)	FUT10 (ENSECAG00000020319)	NRG1 (ENSECAG00000021343)	WRN (ENSECAG00000000110)
Platypus	MODERN SPECIES	16	PLEKHA2 (ENSOANG00000043447)	TACC1 (ENSOANG00000007613)	FGFR1 (ENSOANG00000003252)	LETM2 (ENSOANG00000006864)	NSD3 (ENSOANG00000003253)	PLPP5 (ENSOANG00000046164)	DDHD2 (ENSOANG00000003255)	BAG4 (ENSOANG00000003257)	LSM1 (ENSOANG00000050496)	STAR (ENSOANG00000013099)	ASH2L (ENSOANG00000013100)	ENSOANG00000031908	ENSOANG00000007344	ADRB3 (ENSOANG00000038393)	ENSOANG00000049421	ENSOANG00000010241 ##22	ENSOANG00000003030	BRF2 (ENSOANG00000048233)	ADGRA2 (ENSOANG00000043495)	ERLIN2 (ENSOANG00000007861) ##13	PLPBP (ENSOANG00000042072)	ZNF703 (ENSOANG00000042203)	KCNU1 (ENSOANG00000001328)	UNC5D (ENSOANG00000009393)	DUSP26 (ENSOANG00000002390)	ENSOANG00000002393	MAK16 (ENSOANG00000002395)	SLC18A1 (ENSOANG00000010571)	ATP6V1B2 (ENSOANG00000010576)	LZTS1 (ENSOANG00000010581)	GFRA2 (ENSOANG00000013182)
Anura	ANCESTRAL SPECIES	30	ENSGT00390000017162	ENSGT00940000161674	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161418	ENSGT00390000016333	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000158603.f	ENSGT00940000155068.b	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000158663	ENSGT00950000183082.b.a ##22	ENSGT00940000161454.i.b.b	ENSGT01060000248581.E.d.b.a.b.a.a	ENSGT01030000234527.A.a.b.a.a.n	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.b.b	ENSGT00950000182859.A.a.a.b	ENSGT00960000187172	ENSGT00940000154314	ENSGT00390000008225	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000156716.a.a	ENSGT00940000156716.b	ENSGT00940000156716.a.b
Leishan spiny toad	MODERN SPECIES	6	DMTN (ENSLLEG00000020614)	NPM2 (ENSLLEG00000020477)	PBDC1 (ENSLLEG00000020403)	XPO7 (ENSLLEG00000019200)	DOK2 (ENSLLEG00000019038)	ENSLLEG00000018974	GFRA2 (ENSLLEG00000018714)	ENSLLEG00000018659	ATP6V1B2 (ENSLLEG00000018413)	SLC18A1 (ENSLLEG00000018264)	TTI2 (ENSLLEG00000018148)	ENSLLEG00000018128	MAK16 (ENSLLEG00000018049)	ENSLLEG00000018021	ENSLLEG00000017890	ENSLLEG00000017794 ##22	ENSLLEG00000017768	ENSLLEG00000017680	ENSLLEG00000017607	ENSLLEG00000017558	ENSLLEG00000017530	ENSLLEG00000016642	ENSLLEG00000016564	ENSLLEG00000016538	BNIP3L (ENSLLEG00000016427)	ENSLLEG00000015793	EBF2 (ENSLLEG00000015288)	ENSLLEG00000015043	KCTD9 (ENSLLEG00000014581)	DOCK5 (ENSLLEG00000014183)	NEFL (ENSLLEG00000014130)
Coelacanth	MODERN SPECIES	816																GOT1L1 (ENSLACG00000014513) ##22	prlhr2b (ENSLACG00000013902)	RAB11FIP1 (ENSLACG00000013576)	BRF2 (ENSLACG00000013380)	ADGRA2 (ENSLACG00000011492)	PLPBP (ENSLACG00000011067)	ERLIN2 (ENSLACG00000010499) ##13
Actinopterygii	ANCESTRAL SPECIES	272									ENSGT00940000156522	ENSGT00940000158488	ENSGT00940000164785	ENSGT00940000155968	ENSGT00940000156575	ENSGT00940000158663	ENSGT00940000161418	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000159649	ENSGT00390000002288	ENSGT00940000158941	ENSGT00390000004928	ENSGT00930000150969.A
Neopterygii	ANCESTRAL SPECIES	132	ENSGT00940000160930	ENSGT00390000005989.b	ENSGT00940000164380.a	ENSGT01030000237754	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00940000156522	ENSGT00940000158488	ENSGT00940000164785	ENSGT00940000155968.d.b	ENSGT00940000155968.d.a	ENSGT00940000156575	ENSGT00940000158663.d	ENSGT00940000158663.c	ENSGT00940000161418	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000165511	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000158918	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246
Osteoglossocephalai	ANCESTRAL SPECIES	292							ENSGT00940000167013	ENSGT00940000157176.b	ENSGT01070000253744.b.a.a.b	ENSGT00390000007636	ENSGT00940000156522.c.b	ENSGT00940000155968.d.a	ENSGT00940000156575	ENSGT00940000158663.d	ENSGT00970000196970	ENSGT00950000183082.b.a ##22	ENSGT00940000164214	ENSGT00940000165511.a	ENSGT00390000002288	ENSGT00940000159649
Clupeocephala	ANCESTRAL SPECIES	67	ENSGT00940000166050	ENSGT00940000166710	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000155864.b.c.b	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00970000196970	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246
Otomorpha	ANCESTRAL SPECIES	376													ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00970000196970	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649.q.a	ENSGT00940000159649.q.b	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m
Clupeiformes	ANCESTRAL SPECIES	57	ENSGT00950000182966.A.a.a	ENSGT00940000156763.b.b	ENSGT00390000013158	ENSGT00390000018644	ENSGT00390000000543	ENSGT00940000158560	ENSGT00940000161618	ENSGT00940000179831	ENSGT00440000038604.j	ENSGT00940000154149.a.b	ENSGT00940000155127.a.b	ENSGT00950000183002.B.a.a	ENSGT00530000063843.a.a	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558
Denticle herring	MODERN SPECIES	2	zgc:194202 (ENSDCDG00000019479)	PNPLA7 (ENSDCDG00000018222)	mrpl41 (ENSDCDG00000018171)	dph7 (ENSDCDG00000018162)	paxx (ENSDCDG00000018157)	ABCA2 (ENSDCDG00000014681)	ENSDCDG00000014521	niban2b (ENSDCDG00000010871)	stxbp1b (ENSDCDG00000005138)	ENSDCDG00000005016	WHRN (ENSDCDG00000005010)	noxa1 (ENSDCDG00000005009)	ENSDCDG00000005007	AAK1 (ENSDCDG00000004680)	adrb3a (ENSDCDG00000004645)	got1l1 (ENSDCDG00000004642) ##22	prlhr2a (ENSDCDG00000004637)	ENSDCDG00000004634	sorbs3 (ENSDCDG00000004628)	pdlim2 (ENSDCDG00000004621)	adgra2 (ENSDCDG00000004474)	ENSDCDG00000004462	nkx6.3 (ENSDCDG00000004454)	inpp5l (ENSDCDG00000004449)	GPAT4 (ENSDCDG00000004418)	RNF122 (ENSDCDG00000004407)	ENSDCDG00000004401	zgc:154046 (ENSDCDG00000003549)	ENSDCDG00000003434	ENSDCDG00000003429	ENSDCDG00000003421
Atlantic herring	MODERN SPECIES	23	cldn26 (ENSCHAG00000007622)	PNPLA7 (ENSCHAG00000007722)	mrpl41 (ENSCHAG00000010473)	dph7 (ENSCHAG00000010485)	ENSCHAG00000010498	ABCA2 (ENSCHAG00000010529)	FUT7 (ENSCHAG00000012363)	ENSCHAG00000012372	niban2b (ENSCHAG00000012455)	stxbp1b (ENSCHAG00000012760)	ENSCHAG00000016840	noxa1 (ENSCHAG00000016859)	ENSCHAG00000016877	adrb3a (ENSCHAG00000016998)	npm2a (ENSCHAG00000017006)	got1l1 (ENSCHAG00000017021) ##22	ENSCHAG00000017082	prlhr2a (ENSCHAG00000017087)	ENSCHAG00000017130	ENSCHAG00000017140	adgra2 (ENSCHAG00000017179)	pdlim2 (ENSCHAG00000018351)	sorbs3 (ENSCHAG00000018358)	sytl1 (ENSCHAG00000018364)	zgc:110239 (ENSCHAG00000018378)	ENSCHAG00000018465	ENSCHAG00000018514	ENSCHAG00000018687	mthfd2l (ENSCHAG00000018748)	lipg (ENSCHAG00000018787)	slc20a2 (ENSCHAG00000018853)
Otophysi	ANCESTRAL SPECIES	255														ENSGT00940000158663.c	ENSGT00970000196970	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649.q.a	ENSGT00940000159649.q.b	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00940000161259.A	ENSGT00940000161970.z	ENSGT00940000161348
Characiphysae	ANCESTRAL SPECIES	71	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a.e	ENSGT00940000160547	ENSGT00940000181688	ENSGT00940000154314.b	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529	ENSGT00390000013287	ENSGT00940000158510	ENSGT00950000183083.a.d.b	ENSGT00940000158663.c	ENSGT00970000196970	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00950000182865.b.a.b.b.a.a.a	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00940000161259.A	ENSGT00940000159331.a	ENSGT00390000015537	ENSGT00940000155770.b.a.c	ENSGT00390000003453.a.c
Channel catfish	MODERN SPECIES	24	kdm5c (ENSIPUG00000011859)	ENSIPUG00000011840	ENSIPUG00000011790	ENSIPUG00000011736	KCTD9 (ENSIPUG00000011636)	Npy1r (ENSIPUG00000011623)	klhl22 (ENSIPUG00000011577)	tbx16 (ENSIPUG00000011441)	asb4 (ENSIPUG00000011415)	cabin1 (ENSIPUG00000011197)	cep78 (ENSIPUG00000011146)	gna14 (ENSIPUG00000011128)	vps13a (ENSIPUG00000010219)	adrb3a (ENSIPUG00000010110)	npm2a (ENSIPUG00000010101)	got1l1 (ENSIPUG00000010086) ##22	prlhr2a (ENSIPUG00000010082)	ENSIPUG00000010070	adgra2 (ENSIPUG00000009932)	Pdlim2 (ENSIPUG00000009855)	sorbs3 (ENSIPUG00000009782)	ENSIPUG00000009773	ENSIPUG00000009748	nkx6-3 (ENSIPUG00000009736)	inpp5l (ENSIPUG00000009715)	ENSIPUG00000009699	GPAT4 (ENSIPUG00000009607)	ENSIPUG00000009588	gcnt1 (ENSIPUG00000009570)	rfk (ENSIPUG00000009549)	pcsk5 (ENSIPUG00000009447)
Characiphysae_b	ANCESTRAL SPECIES	75	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a.e	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529.d	ENSGT00390000008529.c	ENSGT00390000013287	ENSGT00940000158510	ENSGT00950000183083.a.d.b	ENSGT00940000158663.c	ENSGT00970000196970	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00950000182865.b.a.b.b.a.a.a	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00940000161259.A	ENSGT00940000159331.a	ENSGT00390000015537	ENSGT00940000155770.b.a.c	ENSGT00390000003453.a.c
Electric eel	MODERN SPECIES	181	ENSEEEG00000001995	ENSEEEG00000001994	ENSEEEG00000001991	ENSEEEG00000001990	FRMD3 (ENSEEEG00000001989)	gkap1 (ENSEEEG00000001987)	zgc:136564 (ENSEEEG00000001984)	hnrnpk (ENSEEEG00000001982)	rmi1 (ENSEEEG00000001981)	NTRK2 (ENSEEEG00000001980)	agtpbp1 (ENSEEEG00000001795)	naa35 (ENSEEEG00000001786)	ENSEEEG00000001784	adrb3a (ENSEEEG00000001782)	ENSEEEG00000001781	got1l1 (ENSEEEG00000001779) ##22
Characoidei	ANCESTRAL SPECIES	72	ENSGT01100000263540.B.d ##19	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a.e	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529.d	ENSGT00390000008529.c	ENSGT00390000013287	ENSGT00940000158510	ENSGT00950000183083.a.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00950000182865.b.a.b.b.a.a.a	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00940000159331.a	ENSGT00390000015537	ENSGT00940000155770.b.a.c	ENSGT00390000003453.a.c	ENSGT00940000158379
Red-bellied piranha	MODERN SPECIES	44	fgfr1a (ENSPNAG00000020161)	ENSPNAG00000020122	ankrd39 (ENSPNAG00000003624)	ENSPNAG00000020086	kctd9a (ENSPNAG00000020060)	npy8br (ENSPNAG00000006422)	KLHL22 (ENSPNAG00000019987)	tbx16 (ENSPNAG00000019971)	ENSPNAG00000019831	CABIN1 (ENSPNAG00000019814)	CEP78 (ENSPNAG00000019733)	GNA14 (ENSPNAG00000019726)	vps13a (ENSPNAG00000019644)	adrb3a (ENSPNAG00000018201)	npm2a (ENSPNAG00000018186)	got1l1 (ENSPNAG00000003509) ##22	prlhr2a (ENSPNAG00000018165)	ENSPNAG00000018143	adgra2 (ENSPNAG00000018110)	pdlim2 (ENSPNAG00000018080)	sorbs3 (ENSPNAG00000018023)	ENSPNAG00000018001	ENSPNAG00000017995	nkx6.3 (ENSPNAG00000017980)	inpp5l (ENSPNAG00000017965)	GPAT4 (ENSPNAG00000017911)	ENSPNAG00000017815	FOXB2 (ENSPNAG00000017810)	GCNT1 (ENSPNAG00000017799)	rfk (ENSPNAG00000017787)	pcsk5b (ENSPNAG00000017754)
Mexicana tetra	MODERN SPECIES	1345								tbx16 (ENSAMXG00000001195)	CABIN1 (ENSAMXG00000001215)	CEP78 (ENSAMXG00000032851)	GNA14 (ENSAMXG00000001059)	vps13a (ENSAMXG00000001062)	ENSAMXG00000029944	adrb3a (ENSAMXG00000001079)	npm2a (ENSAMXG00000001084)	got1l1 (ENSAMXG00000029051) ##22	prlhr2a (ENSAMXG00000001098)	ENSAMXG00000001107	adgra2 (ENSAMXG00000001112)	ENSAMXG00000038956
Cyprinoidei	ANCESTRAL SPECIES	47	ENSGT00940000164196.d	ENSGT00390000013740	ENSGT00390000011228.b.a.f	ENSGT00940000154471.a.a	ENSGT00940000157898	ENSGT00390000015805.b	ENSGT00940000154468.tb.b.b	ENSGT00950000182844.a.a.b	ENSGT00940000165387.a	ENSGT00550000074865	ENSGT00940000157261.k.b	ENSGT00940000157007.i.a	ENSGT00940000161337.a.a.a.b	ENSGT00940000161337.a.a.b.b.h	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649.q.a.a	ENSGT00940000159649.q.b	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00940000161259.A	ENSGT00940000161970.z	ENSGT00390000015537
Cyprininae	ANCESTRAL SPECIES	109	ENSGT00940000159667.b.b	ENSGT00940000164196.d.b	ENSGT00390000013740.i	ENSGT00940000154471.a.a.f	ENSGT00940000157898.k	ENSGT00390000015805.b.b	ENSGT00940000154468.tb.b.b.d	ENSGT00950000182844.a.a.b.d	ENSGT00940000165387.a.b	ENSGT00550000074865.l	ENSGT00940000157261.k.b.a	ENSGT00940000157007.i.a.a.b	ENSGT00940000158663.c.b	ENSGT00940000161418.r	ENSGT00940000158663.c.a	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a.b	ENSGT00940000159649.q.b	ENSGT00940000165511.a	ENSGT00940000158941.d	ENSGT00940000160418.i.b	ENSGT00940000160558.o	ENSGT00940000162540	ENSGT00950000182865.b.a.b.b.a.a.a.j.b.a	ENSGT00940000166233.d.a.b	ENSGT00940000160545.g	ENSGT00390000015226.c.b	ENSGT01030000234574.B.c.b.b.m.b	ENSGT00940000162206.kb	ENSGT00940000161970.z.a	ENSGT00390000015537.d
Goldfish	MODERN SPECIES	2832	si:busm1-266f07.1 (ENSCARG00000047626)	mhc2daa (ENSCARG00000047604)	ENSCARG00000047575	IQSEC2 (ENSCARG00000047406)	kdm5c (ENSCARG00000046843)	zgc:162200 (ENSCARG00000046805)	ren (ENSCARG00000045687)	csf1b (ENSCARG00000045570)	rbm39b (ENSCARG00000057373)	rh50 (ENSCARG00000057285)	ENSCARG00000057033	eif2d (ENSCARG00000056839)	FMOD (ENSCARG00000056776)	adrb3a (ENSCARG00000056749)	adrb3a (ENSCARG00000056738)	got1l1 (ENSCARG00000056730) ##22	prlhr2a (ENSCARG00000056707)	adgra2 (ENSCARG00000056401)	pdlim2 (ENSCARG00000056378)	sorbs3 (ENSCARG00000056357)	ENSCARG00000056341	ENSCARG00000056326	ENSCARG00000056303	nkx6.3 (ENSCARG00000056298)	inpp5l (ENSCARG00000056222)	GPAT4 (ENSCARG00000055959)	ENSCARG00000055930	FOXB2 (ENSCARG00000055924)	ENSCARG00000055907	rfk (ENSCARG00000055899)	pcsk5b (ENSCARG00000051874)
Cyprininae_a	ANCESTRAL SPECIES	103	ENSGT00390000013740.i	ENSGT00940000154471.a.a.f	ENSGT00940000157898.k	ENSGT00390000015805.b.b	ENSGT00940000154468.tb.b.b.d	ENSGT00950000182844.a.a.b.d	ENSGT00940000165387.a.b	ENSGT00550000074865.l	ENSGT00940000157261.k.b.a	ENSGT00940000157007.i.a.a.b	ENSGT00940000161337.a.a.b.a	ENSGT00940000161337.a.a.a.b	ENSGT00940000161337.a.a.b.b.h	ENSGT00940000158663.c.b	ENSGT00940000161418.r	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a.b	ENSGT00940000159649.q.b	ENSGT00940000165511.a	ENSGT00940000158941.d	ENSGT00940000160418.i.b	ENSGT00940000160558.o	ENSGT00940000162540	ENSGT00940000160545.h	ENSGT00390000015226.c.b	ENSGT01030000234574.B.c.b.b.m.b	ENSGT00940000162206.kb	ENSGT00940000161970.z.a	ENSGT00390000015537.d	ENSGT00940000155770.b.a.e	ENSGT00390000003453.a.c.a
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	17	ENSCCRG00000068943	ENSCCRG00000066249	kdm5c (ENSCCRG00000009638)	renbp (ENSCCRG00000082003)	ENSCCRG00000006463	zgc:162200 (ENSCCRG00000006450)	ren (ENSCCRG00000006032)	csf1b (ENSCCRG00000006018)	rbm39b (ENSCCRG00000013332)	ENSCCRG00000057168	ENSCCRG00000034400	eif2d (ENSCCRG00000039430)	ENSCCRG00000044295	adrb3a (ENSCCRG00000072214)	ENSCCRG00000080944	got1l1 (ENSCCRG00000028186) ##22	prlhr2a (ENSCCRG00000071317)	ENSCCRG00000033836	adgra2 (ENSCCRG00000079204)	pdlim2 (ENSCCRG00000036420)	sorbs3 (ENSCCRG00000033667)	ENSCCRG00000071055	ENSCCRG00000062248	ENSCCRG00000036605	nkx6.3 (ENSCCRG00000043222)	inpp5l (ENSCCRG00000036802)	ENSCCRG00000062228	ENSCCRG00000056804	pcsk5b (ENSCCRG00000040985)	ENSCCRG00000079954	rfk (ENSCCRG00000082040)
Common carp reference	MODERN SPECIES	23	pqbp1 (ENSCCRG00000072986)	gpkow (ENSCCRG00000051337)	ENSCCRG00000071360	ENSCCRG00000009497	kdm5c (ENSCCRG00000006485)	renbp (ENSCCRG00000059948)	zgc:162200 (ENSCCRG00000046642)	ren (ENSCCRG00000046653)	csf1b (ENSCCRG00000046754)	rbm39b (ENSCCRG00000005995)	ENSCCRG00000023391	ENSCCRG00000079606	mapkapk2b (ENSCCRG00000038472)	adrb3a (ENSCCRG00000001815)	npm2a (ENSCCRG00000001828)	got1l1 (ENSCCRG00000081094) ##22	prlhr2a (ENSCCRG00000012088)	ENSCCRG00000012098	adgra2 (ENSCCRG00000035395)	pdlim2 (ENSCCRG00000059710)	sorbs3 (ENSCCRG00000015701)	ENSCCRG00000013760	ENSCCRG00000058025	nkx6.3 (ENSCCRG00000036611)	inpp5l (ENSCCRG00000043224)	rfk (ENSCCRG00000004989)	ENSCCRG00000004978	pcsk5b (ENSCCRG00000004996)	ubap2b (ENSCCRG00000064935)	ENSCCRG00000046702	zgc:154046 (ENSCCRG00000046719)
Golden-line barbel	MODERN SPECIES	1357														adrb3a (ENSSGRG00000011242)	npm2a (ENSSGRG00000011249)	got1l1 (ENSSGRG00000011251) ##22	prlhr2a (ENSSGRG00000011252)	ENSSGRG00000011255	ENSSGRG00000011257	adgra2 (ENSSGRG00000011269)
Zebrafish	MODERN SPECIES	23	kdm5c (ENSDARG00000006124)	renbp (ENSDARG00000008931)	ENSDARG00000079869	zgc:162200 (ENSDARG00000079934)	ren (ENSDARG00000041858)	csf1b (ENSDARG00000068263)	rbm39b (ENSDARG00000041853)	rh50 (ENSDARG00000041848)	ENSDARG00000078187	eif2d (ENSDARG00000012929)	mapkapk2b (ENSDARG00000018530)	FMOD (ENSDARG00000010294)	or90j1 (ENSDARG00000053648)	adrb3a (ENSDARG00000053646)	npm2a (ENSDARG00000076391)	got1l1 (ENSDARG00000053644) ##22	prlhr2a (ENSDARG00000044900)	ENSDARG00000046124	adgra2 (ENSDARG00000076994)	pdlim2 (ENSDARG00000069956)	sorbs3 (ENSDARG00000037476)	nkx6.3 (ENSDARG00000060529)	inpp5l (ENSDARG00000053878)	FOXB2 (ENSDARG00000037475)	rfk (ENSDARG00000060522)	ENSDARG00000092574	pcsk5b (ENSDARG00000060518)	ENSDARG00000117159	LZTS1 (ENSDARG00000075565)	msi1b (ENSDARG00000010710)	ENSDARG00000075480
Euteleosteomorpha	ANCESTRAL SPECIES	14	ENSGT00950000182882.B	ENSGT00940000166050	ENSGT00940000166710	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000155864.b.c.b	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00390000003246	ENSGT00940000163584.b.b
Acanthomorphata	ANCESTRAL SPECIES	27	ENSGT00940000166050	ENSGT00940000166710	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	22	ENSGT00940000166710	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00940000166710	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00990000214347	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00990000214347	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000166233	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Pomacentridae	ANCESTRAL SPECIES		ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Amphiprion	ANCESTRAL SPECIES	18						ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Orange clownfish	MODERN SPECIES	19	zgc:103692 (ENSAPEG00000015013)	nfu1 (ENSAPEG00000014977)	gfpt1 (ENSAPEG00000014907)	med22 (ENSAPEG00000014886)	med22 (ENSAPEG00000014864)	zgc:103692 (ENSAPEG00000014833)	nfu1 (ENSAPEG00000014807)	ENSAPEG00000014756	gfpt1 (ENSAPEG00000014718)	ANTXR1 (ENSAPEG00000014659)	ENSAPEG00000014642	kansl3 (ENSAPEG00000014495)	bmp1a (ENSAPEG00000014430)	AAK1 (ENSAPEG00000014378)	adrb3a (ENSAPEG00000014371)	got1l1 (ENSAPEG00000014258) ##22	prlhr2a (ENSAPEG00000014225)	ENSAPEG00000014216	adgra2 (ENSAPEG00000014134)	pdlim2 (ENSAPEG00000014081)	sorbs3 (ENSAPEG00000014028)	ENSAPEG00000013992	ENSAPEG00000013968	ENSAPEG00000013929	nkx6.3 (ENSAPEG00000013913)	inpp5l (ENSAPEG00000013854)	GPAT4 (ENSAPEG00000013759)	POLR3D (ENSAPEG00000013751)	PHYHIP (ENSAPEG00000013727)	ppp1r3c2b (ENSAPEG00000013715)	gins4 (ENSAPEG00000013685)
Clown anemonefish	MODERN SPECIES	1863						bmp1a (ENSAOCG00000015691)	kansl3 (ENSAOCG00000015598)	ENSAOCG00000015515	ANTXR1 (ENSAOCG00000015470)	gfpt1 (ENSAOCG00000015421)	nfu1 (ENSAOCG00000015354)	zgc:103692 (ENSAOCG00000015341)	med22 (ENSAOCG00000001063)	AAK1 (ENSAOCG00000015277)	adrb3a (ENSAOCG00000015216)	got1l1 (ENSAOCG00000015203) ##22	prlhr2a (ENSAOCG00000015120)	ENSAOCG00000015107	ENSAOCG00000001050
Spiny chromis	MODERN SPECIES	385	ENSAPOG00000010928	ENSAPOG00000010954	zgc:56596 (ENSAPOG00000010964)	ENSAPOG00000011027	DISP3 (ENSAPOG00000011051)	bmp1a (ENSAPOG00000011143)	kansl3 (ENSAPOG00000011455)	ENSAPOG00000011498	ANTXR1 (ENSAPOG00000011550)	gfpt1 (ENSAPOG00000011647)	nfu1 (ENSAPOG00000011671)	zgc:103692 (ENSAPOG00000000325)	med22 (ENSAPOG00000011747)	AAK1 (ENSAPOG00000011837)	adrb3a (ENSAPOG00000011866)	got1l1 (ENSAPOG00000011875) ##22	prlhr2a (ENSAPOG00000011884)	ENSAPOG00000011892	adgra2 (ENSAPOG00000011983)	pdlim2 (ENSAPOG00000012013)	sorbs3 (ENSAPOG00000012057)	ENSAPOG00000012085	nkx6.3 (ENSAPOG00000012105)	inpp5l (ENSAPOG00000012131)	GPAT4 (ENSAPOG00000012182)	POLR3D (ENSAPOG00000012197)	PHYHIP (ENSAPOG00000012222)	ppp1r3c2b (ENSAPOG00000012233)	gins4 (ENSAPOG00000012260)	arid5a (ENSAPOG00000012295)
Bicolor damselfish	MODERN SPECIES	502														ENSSPAG00000000180	adrb3a (ENSSPAG00000000131)	got1l1 (ENSSPAG00000000062) ##22	prlhr2a (ENSSPAG00000000038)	ENSSPAG00000000036	adgra2 (ENSSPAG00000023348)	pdlim2 (ENSSPAG00000023344)	ENSSPAG00000023343	sorbs3 (ENSSPAG00000023342)	ENSSPAG00000023339	nkx6.3 (ENSSPAG00000023335)	inpp5l (ENSSPAG00000023333)	GPAT4 (ENSSPAG00000023329)	POLR3D (ENSSPAG00000023326)	PHYHIP (ENSSPAG00000023325)	ppp1r3c2b (ENSSPAG00000023321)	gins4 (ENSSPAG00000023314)	arid5a (ENSSPAG00000023311)
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT01060000250581	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b.h	ENSGT00940000157079.b.g.b	ENSGT00940000157079.b.g.a.a	ENSGT00940000157079.b.g.a.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b.h	ENSGT00940000157079.b.g.b	ENSGT00940000157079.b.g.a.a	ENSGT00940000157079.b.g.a.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b.h	ENSGT00940000157079.b.g.b	ENSGT00940000157079.b.g.a.a	ENSGT00940000157079.b.g.a.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b.h	ENSGT00940000157079.b.g.b	ENSGT00940000157079.b.g.a.a	ENSGT00940000157079.b.g.a.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000169772.B	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b.h	ENSGT00940000157079.b.g.b	ENSGT00940000157079.b.g.a.a	ENSGT00940000157079.b.g.a.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b
Zebra mbuna	MODERN SPECIES	1094	ENSMZEG00005012663	ENSMZEG00005012568	zgc:56596 (ENSMZEG00005012521)	ENSMZEG00005012464	DISP3 (ENSMZEG00005012438)	bmp1a (ENSMZEG00005012403)	kansl3 (ENSMZEG00005012365)	ENSMZEG00005012349	ANTXR1 (ENSMZEG00005012321)	gfpt1 (ENSMZEG00005012263)	nfu1 (ENSMZEG00005012240)	zgc:103692 (ENSMZEG00005012229)	med22 (ENSMZEG00005012219)	AAK1 (ENSMZEG00005012175)	adrb3a (ENSMZEG00005012148)	got1l1 (ENSMZEG00005012133) ##22	prlhr2a (ENSMZEG00005011712)	ENSMZEG00005011696	ENSMZEG00005011681	adgra2 (ENSMZEG00005011663)	pdlim2 (ENSMZEG00005011631)	sorbs3 (ENSMZEG00005011614)	ENSMZEG00005011595	ENSMZEG00005011572	ENSMZEG00005011563	ENSMZEG00005011550	nkx6.3 (ENSMZEG00005011544)	inpp5l (ENSMZEG00005011498)	GPAT4 (ENSMZEG00005011459)	POLR3D (ENSMZEG00005011442)	PHYHIP (ENSMZEG00005011428)
Eastern happy	MODERN SPECIES	3	ENSACLG00000008246	zgc:56596 (ENSACLG00000008264)	ENSACLG00000008271	DISP3 (ENSACLG00000008305)	bmp1a (ENSACLG00000008321)	kansl3 (ENSACLG00000008354)	ENSACLG00000008445	ANTXR1 (ENSACLG00000009087)	gfpt1 (ENSACLG00000009162)	nfu1 (ENSACLG00000009266)	zgc:103692 (ENSACLG00000009279)	med22 (ENSACLG00000009301)	AAK1 (ENSACLG00000009314)	ENSACLG00000009381	adrb3a (ENSACLG00000009393)	got1l1 (ENSACLG00000009412) ##22	prlhr2a (ENSACLG00000009429)	ENSACLG00000009433	ENSACLG00000009434	adgra2 (ENSACLG00000009436)	pdlim2 (ENSACLG00000009455)	sorbs3 (ENSACLG00000009477)	ENSACLG00000010001	inpp5l (ENSACLG00000010016)	ENSACLG00000010062	ENSACLG00000010081	ENSACLG00000010088	nkx6.3 (ENSACLG00000010091)	GPAT4 (ENSACLG00000010105)	POLR3D (ENSACLG00000010147)	PHYHIP (ENSACLG00000010172)
P. nyererei	MODERN SPECIES	328	ENSPNYG00000014876	ENSPNYG00000014960	zgc:56596 (ENSPNYG00000015142)	ENSPNYG00000015162	DISP3 (ENSPNYG00000015205)	bmp1a (ENSPNYG00000015293)	kansl3 (ENSPNYG00000015342)	ENSPNYG00000015378	ANTXR1 (ENSPNYG00000015395)	gfpt1 (ENSPNYG00000015439)	nfu1 (ENSPNYG00000015492)	zgc:103692 (ENSPNYG00000015509)	med22 (ENSPNYG00000015537)	AAK1 (ENSPNYG00000015552)	adrb3a (ENSPNYG00000015659)	got1l1 (ENSPNYG00000015677) ##22	prlhr2a (ENSPNYG00000015762)	ENSPNYG00000015775	ENSPNYG00000015790	adgra2 (ENSPNYG00000015829)	pdlim2 (ENSPNYG00000016014)	sorbs3 (ENSPNYG00000016117)	ENSPNYG00000016150	ENSPNYG00000016164	ENSPNYG00000016174	nkx6.3 (ENSPNYG00000016191)	inpp5l (ENSPNYG00000016213)	GPAT4 (ENSPNYG00000016255)	POLR3D (ENSPNYG00000016306)	PHYHIP (ENSPNYG00000016322)	ppp1r3c2b (ENSPNYG00000016340)
Lyretail cichlid	MODERN SPECIES	296	ENSNBRG00000022575	ENSNBRG00000022470	zgc:56596 (ENSNBRG00000022441)	ENSNBRG00000022415	DISP3 (ENSNBRG00000022383)	bmp1a (ENSNBRG00000022340)	kansl3 (ENSNBRG00000022309)	ENSNBRG00000022290	ANTXR1 (ENSNBRG00000022264)	gfpt1 (ENSNBRG00000022179)	nfu1 (ENSNBRG00000022151)	zgc:103692 (ENSNBRG00000022139)	med22 (ENSNBRG00000022126)	AAK1 (ENSNBRG00000022059)	adrb3a (ENSNBRG00000022047)	got1l1 (ENSNBRG00000022002) ##22	prlhr2a (ENSNBRG00000021977)	ENSNBRG00000021963	adgra2 (ENSNBRG00000021920)	pdlim2 (ENSNBRG00000021827)	sorbs3 (ENSNBRG00000021787)	ENSNBRG00000021752	ENSNBRG00000021731
Nile tilapia	MODERN SPECIES	3	ENSONIG00000034956	zgc:56596 (ENSONIG00000030145)	ENSONIG00000011714	DISP3 (ENSONIG00000011711)	bmp1a (ENSONIG00000011697)	kansl3 (ENSONIG00000011688)	ENSONIG00000039909	ENSONIG00000042098	ANTXR1 (ENSONIG00000011684)	gfpt1 (ENSONIG00000011678)	nfu1 (ENSONIG00000038332)	lg12h9orf78 (ENSONIG00000028983)	med22 (ENSONIG00000029750)	AAK1 (ENSONIG00000011669)	adrb3a (ENSONIG00000020532)	got1l1 (ENSONIG00000011667) ##22	prlhr2a (ENSONIG00000041076)	ENSONIG00000036672	adgra2 (ENSONIG00000011658)	ENSONIG00000040593	pdlim2 (ENSONIG00000011656)	sorbs3 (ENSONIG00000011654)	ENSONIG00000039596	ENSONIG00000038624	ENSONIG00000011652	ENSONIG00000011653	ENSONIG00000042819	nkx6-3 (ENSONIG00000032042)	inpp5l (ENSONIG00000011646)	GPAT4 (ENSONIG00000011641)	ENSONIG00000010289
Midas cichlid	MODERN SPECIES	525								ENSACIG00000006757	ANTXR1 (ENSACIG00000006720)	gfpt1 (ENSACIG00000006666)	nfu1 (ENSACIG00000006607)	zgc:103692 (ENSACIG00000006580)	med22 (ENSACIG00000006567)	AAK1 (ENSACIG00000006539)	adrb3a (ENSACIG00000006513)	got1l1 (ENSACIG00000006448) ##22	prlhr2a (ENSACIG00000006386)	ENSACIG00000006380	ENSACIG00000006366	adgra2 (ENSACIG00000006265)	pdlim2 (ENSACIG00000006231)	sorbs3 (ENSACIG00000006206)
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00990000214347	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000166710	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00940000166710	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Zig-zag eel	MODERN SPECIES	23	ENSMAMG00000010106	zgc:56596 (ENSMAMG00000010092)	ENSMAMG00000010003	ENSMAMG00000009854	bmp1a (ENSMAMG00000009794)	kansl3 (ENSMAMG00000009712)	ENSMAMG00000024607	ENSMAMG00000009653	ENSMAMG00000009585	ENSMAMG00000009470	ENSMAMG00000009447	C9orf78 (ENSMAMG00000026708)	ENSMAMG00000027082	ENSMAMG00000009319	adrb3a (ENSMAMG00000009284)	got1l1 (ENSMAMG00000009253) ##22	prlhr2a (ENSMAMG00000009209)	ENSMAMG00000009189	adgra2 (ENSMAMG00000009167)	pdlim2 (ENSMAMG00000009137)	sorbs3 (ENSMAMG00000009106)	ENSMAMG00000009096	nkx6.3 (ENSMAMG00000009087)	inpp5l (ENSMAMG00000009026)	GPAT4 (ENSMAMG00000008956)	ENSMAMG00000008914	ENSMAMG00000008900	ppp1r3c2b (ENSMAMG00000008895)	gins4 (ENSMAMG00000008863)	arid5a (ENSMAMG00000008849)	dbnlb (ENSMAMG00000008772)
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00940000166710	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Siamese fighting fish	MODERN SPECIES	20	ENSBSLG00000011089	ENSBSLG00000011082	ENSBSLG00000011072	zgc:56596 (ENSBSLG00000011058)	ENSBSLG00000010719	DISP3 (ENSBSLG00000010305)	bmp1a (ENSBSLG00000006272)	kansl3 (ENSBSLG00000006146)	ANTXR1 (ENSBSLG00000005187)	gfpt1 (ENSBSLG00000004388)	nfu1 (ENSBSLG00000004345)	zgc:103692 (ENSBSLG00000004331)	med22 (ENSBSLG00000004329)	AAK1 (ENSBSLG00000003953)	adrb3a (ENSBSLG00000003710)	got1l1 (ENSBSLG00000003685) ##22	prlhr2a (ENSBSLG00000003627)	ENSBSLG00000003606	adgra2 (ENSBSLG00000002792)	pdlim2 (ENSBSLG00000002745)	sorbs3 (ENSBSLG00000002712)	nkx6.3 (ENSBSLG00000002696)	inpp5l (ENSBSLG00000002666)	GPAT4 (ENSBSLG00000002321)	POLR3D (ENSBSLG00000001955)	PHYHIP (ENSBSLG00000001949)	ppp1r3c2b (ENSBSLG00000001944)	gins4 (ENSBSLG00000001936)	arid5a (ENSBSLG00000001932)	dbnlb (ENSBSLG00000001878)	ube2d4 (ENSBSLG00000001838)
Climbing perch	MODERN SPECIES	22	ENSATEG00000000819	ENSATEG00000026852	zgc:56596 (ENSATEG00000026546)	ENSATEG00000000721	ENSATEG00000000522	bmp1a (ENSATEG00000000432)	kansl3 (ENSATEG00000000386)	ENSATEG00000000258	ENSATEG00000000174	ENSATEG00000000048	ENSATEG00000023325	ENSATEG00000023312	ENSATEG00000028141	ENSATEG00000023282	adrb3a (ENSATEG00000023273)	got1l1 (ENSATEG00000023267) ##22	prlhr2a (ENSATEG00000023254)	ENSATEG00000023246	adgra2 (ENSATEG00000023233)	pdlim2 (ENSATEG00000023207)	sorbs3 (ENSATEG00000029115)	ENSATEG00000023181	nkx6.3 (ENSATEG00000023173)	inpp5l (ENSATEG00000023149)	ENSATEG00000023136	ENSATEG00000023119	ENSATEG00000023111	ppp1r3c2b (ENSATEG00000027914)	gins4 (ENSATEG00000023090)	arid5a (ENSATEG00000028528)	dbnlb (ENSATEG00000023057)
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Seriola	ANCESTRAL SPECIES	7	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Yellowtail amberjack	MODERN SPECIES	3232	galnt11 (ENSSLDG00000008146)	ENSSLDG00000008182	ENSSLDG00000008200	sugct (ENSSLDG00000008218)	bmp1a (ENSSLDG00000008249)	kansl3 (ENSSLDG00000008347)	ENSSLDG00000008460	ANTXR1 (ENSSLDG00000008468)	gfpt1 (ENSSLDG00000008529)	nfu1 (ENSSLDG00000008611)	zgc:103692 (ENSSLDG00000008661)	med22 (ENSSLDG00000008713)	AAK1 (ENSSLDG00000008786)	ENSSLDG00000008938	adrb3a (ENSSLDG00000008951)	got1l1 (ENSSLDG00000008990) ##22	prlhr2a (ENSSLDG00000009114)	ENSSLDG00000009125	adgra2 (ENSSLDG00000009189)	pdlim2 (ENSSLDG00000009399)	sorbs3 (ENSSLDG00000009434)	ENSSLDG00000009482	nkx6.3 (ENSSLDG00000009506)	inpp5l (ENSSLDG00000009526)	GPAT4 (ENSSLDG00000009583)	POLR3D (ENSSLDG00000009643)	ppp1r3c2b (ENSSLDG00000009665)	PHYHIP (ENSSLDG00000009676)	gins4 (ENSSLDG00000009702)	arid5a (ENSSLDG00000009730)	dbnlb (ENSSLDG00000009793)
Greater amberjack	MODERN SPECIES	6	ENSSDUG00000019693	zgc:56596 (ENSSDUG00000019732)	ENSSDUG00000019756	DISP3 (ENSSDUG00000019844)	bmp1a (ENSSDUG00000019883)	kansl3 (ENSSDUG00000019942)	ENSSDUG00000020049	ENSSDUG00000020055	ANTXR1 (ENSSDUG00000020074)	gfpt1 (ENSSDUG00000020181)	nfu1 (ENSSDUG00000020227)	zgc:103692 (ENSSDUG00000020237)	med22 (ENSSDUG00000020257)	AAK1 (ENSSDUG00000020275)	adrb3a (ENSSDUG00000020306)	got1l1 (ENSSDUG00000020328) ##22	prlhr2a (ENSSDUG00000020474)	ENSSDUG00000020482	adgra2 (ENSSDUG00000020499)	pdlim2 (ENSSDUG00000020532)	sorbs3 (ENSSDUG00000020560)	ENSSDUG00000020611	nkx6.3 (ENSSDUG00000020641)	inpp5l (ENSSDUG00000020644)	GPAT4 (ENSSDUG00000020674)	POLR3D (ENSSDUG00000020718)	PHYHIP (ENSSDUG00000020740)	ppp1r3c2b (ENSSDUG00000020750)	gins4 (ENSSDUG00000020754)	arid5a (ENSSDUG00000020776)	dbnlb (ENSSDUG00000020796)
Barramundi perch	MODERN SPECIES	95	zgc:56596 (ENSLCAG00010027760)	ENSLCAG00010027759	DISP3 (ENSLCAG00010027756)	bmp1a (ENSLCAG00010027713)	kansl3 (ENSLCAG00010027694)	ENSLCAG00010027691	ENSLCAG00010027689	ENSLCAG00010027687	ANTXR1 (ENSLCAG00010027684)	gfpt1 (ENSLCAG00010027672)	nfu1 (ENSLCAG00010027643)	zgc:103692 (ENSLCAG00010027639)	med22 (ENSLCAG00010027637)	ENSLCAG00010027635	adrb3a (ENSLCAG00010027634)	got1l1 (ENSLCAG00010027633) ##22	prlhr2a (ENSLCAG00010027632)	ENSLCAG00010027631	adgra2 (ENSLCAG00010027592)	pdlim2 (ENSLCAG00010027561)	sorbs3 (ENSLCAG00010027555)	ENSLCAG00010027551	nkx6.3 (ENSLCAG00010027549)	inpp5l (ENSLCAG00010027544)	GPAT4 (ENSLCAG00010027538)	POLR3D (ENSLCAG00010027531)	PHYHIP (ENSLCAG00010027530)	ppp1r3c2b (ENSLCAG00010027528)	gins4 (ENSLCAG00010027523)	arid5a (ENSLCAG00010027520)	dbnlb (ENSLCAG00010027514)
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488.f	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Tongue sole	MODERN SPECIES	398	ENSCSEG00000012048	ssbp2a (ENSCSEG00000012055)	ENSCSEG00000012080	ENSCSEG00000012086	ENSCSEG00000012099	ENSCSEG00000012108	ENSCSEG00000012114	tmem167a (ENSCSEG00000012117)	ENSCSEG00000012123	ENSCSEG00000012133	ENSCSEG00000012143	klf9 (ENSCSEG00000012162)	fam219ab (ENSCSEG00000012169)	ENSCSEG00000012181	adrb3a (ENSCSEG00000012194)	ENSCSEG00000012202 ##22	prlhr2a (ENSCSEG00000012209)	ENSCSEG00000012220	adgra2 (ENSCSEG00000012254)	pdlim2 (ENSCSEG00000012328)	sorbs3 (ENSCSEG00000012353)	neurl3 (ENSCSEG00000012380)	ENSCSEG00000012394	FRMD3 (ENSCSEG00000012406)	IDNK (ENSCSEG00000012415)	UBQLN1 (ENSCSEG00000012422)	gkap1 (ENSCSEG00000012428)	ENSCSEG00000012431	pex11g (ENSCSEG00000012441)	ENSCSEG00000012452	zgc:136564 (ENSCSEG00000012454)
Turbot	MODERN SPECIES	21	ENSSMAG00000029066	ENSSMAG00000007205	zgc:56596 (ENSSMAG00000038055)	ENSSMAG00000007121	ENSSMAG00000007089	bmp1a (ENSSMAG00000007022)	ENSSMAG00000026867	kansl3 (ENSSMAG00000006885)	ENSSMAG00000006808	ENSSMAG00000006736	ENSSMAG00000006720	ENSSMAG00000038036	ENSSMAG00000006704	ENSSMAG00000006655	adrb3a (ENSSMAG00000006649)	got1l1 (ENSSMAG00000006629) ##22	prlhr2a (ENSSMAG00000006618)	ENSSMAG00000006606	adgra2 (ENSSMAG00000006530)	ENSSMAG00000025613	pdlim2 (ENSSMAG00000029378)	sorbs3 (ENSSMAG00000006458)	ENSSMAG00000006425	nkx6.3 (ENSSMAG00000006415)	inpp5l (ENSSMAG00000006387)	ENSSMAG00000006317	ENSSMAG00000006271	ENSSMAG00000006249	ppp1r3c2b (ENSSMAG00000006234)	gins4 (ENSSMAG00000006219)	ENSSMAG00000023243
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00990000214347	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00990000214347	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Ballan wrasse	MODERN SPECIES	14	ENSLBEG00000004978	ENSLBEG00000004944	zgc:56596 (ENSLBEG00000004933)	ENSLBEG00000004848	DISP3 (ENSLBEG00000004745)	bmp1a (ENSLBEG00000004615)	kansl3 (ENSLBEG00000004541)	ENSLBEG00000004517	ANTXR1 (ENSLBEG00000004448)	gfpt1 (ENSLBEG00000004367)	nfu1 (ENSLBEG00000004179)	zgc:103692 (ENSLBEG00000004116)	med22 (ENSLBEG00000004097)	ENSLBEG00000004055	adrb3a (ENSLBEG00000004043)	got1l1 (ENSLBEG00000004031) ##22	prlhr2a (ENSLBEG00000004016)	ENSLBEG00000003987	adgra2 (ENSLBEG00000003747)	pdlim2 (ENSLBEG00000003656)	sorbs3 (ENSLBEG00000003612)	ENSLBEG00000003587	nkx6.3 (ENSLBEG00000003576)	inpp5l (ENSLBEG00000003528)	GPAT4 (ENSLBEG00000003460)	POLR3D (ENSLBEG00000003430)	PHYHIP (ENSLBEG00000003407)	ppp1r3c2b (ENSLBEG00000003390)	gins4 (ENSLBEG00000003355)	arid5a (ENSLBEG00000003312)	dbnlb (ENSLBEG00000003230)
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00990000214347	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00990000214347	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	28	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
European seabass	MODERN SPECIES	13	ENSDLAG00005017881	ENSDLAG00005019412	ENSDLAG00005019508	ENSDLAG00005019667	bmp1a (ENSDLAG00005019871)	kansl3 (ENSDLAG00005020631)	ENSDLAG00005020804	ENSDLAG00005020809	ENSDLAG00005020812	ANTXR1 (ENSDLAG00005020825)	ENSDLAG00005021044	ENSDLAG00005021205	ENSDLAG00005034100	AAK1 (ENSDLAG00005021224)	adrb3a (ENSDLAG00005021477)	got1l1 (ENSDLAG00005030252) ##22	prlhr2a (ENSDLAG00005026604)	ENSDLAG00005021501	adgra2 (ENSDLAG00005021520)	pdlim2 (ENSDLAG00005028058)	sorbs3 (ENSDLAG00005021985)	limk2 (ENSDLAG00005022033)	ENSDLAG00005035122	ENSDLAG00005022817	TCTN2 (ENSDLAG00005022842)	ENSDLAG00005022874	DNAH10 (ENSDLAG00005023275)	ENSDLAG00005023395	rhbdd3 (ENSDLAG00005023399)	ewsr1b (ENSDLAG00005023400)	ENSDLAG00005029080
Large yellow croaker	MODERN SPECIES	2	ELMOD3 (ENSLCRG00005011156)	star (ENSLCRG00005011158)	ENSLCRG00005011183	lsm1 (ENSLCRG00005012883)	bag4 (ENSLCRG00005012885)	ENSLCRG00005012888	ENSLCRG00005012897	ANTXR1 (ENSLCRG00005012907)	gfpt1 (ENSLCRG00005013590)	nfu1 (ENSLCRG00005013593)	zgc:103692 (ENSLCRG00005013594)	med22 (ENSLCRG00005013599)	med22 (ENSLCRG00005013600)	AAK1 (ENSLCRG00005013604)	adrb3a (ENSLCRG00005013611)	got1l1 (ENSLCRG00005013613) ##22	ENSLCRG00005013617	prlhr2a (ENSLCRG00005013619)	adgra2 (ENSLCRG00005013627)	pdlim2 (ENSLCRG00005014133)	sorbs3 (ENSLCRG00005014134)	ENSLCRG00005014137	nkx6.3 (ENSLCRG00005014138)	inpp5l (ENSLCRG00005014141)	GPAT4 (ENSLCRG00005014144)	POLR3D (ENSLCRG00005014195)	ENSLCRG00005014201	PHYHIP (ENSLCRG00005014205)	ppp1r3c2b (ENSLCRG00005014207)	gins4 (ENSLCRG00005014210)	ENSLCRG00005001520
Gilthead seabream	MODERN SPECIES	19	ENSSAUG00010009979	zgc:56596 (ENSSAUG00010009964)	ENSSAUG00010009914	DISP3 (ENSSAUG00010009898)	bmp1a (ENSSAUG00010007433)	kansl3 (ENSSAUG00010006617)	ENSSAUG00010006588	ENSSAUG00010006586	gfpt1 (ENSSAUG00010006536)	nfu1 (ENSSAUG00010006527)	ANTXR1 (ENSSAUG00010005979)	med22 (ENSSAUG00010005973)	ENSSAUG00010005972	AAK1 (ENSSAUG00010005087)	adrb3a (ENSSAUG00010005073)	got1l1 (ENSSAUG00010005071) ##22	prlhr2a (ENSSAUG00010005068)	ENSSAUG00010005066	adgra2 (ENSSAUG00010004449)	pdlim2 (ENSSAUG00010004421)	sorbs3 (ENSSAUG00010004408)	ENSSAUG00010004399	nkx6.3 (ENSSAUG00010004397)	inpp5l (ENSSAUG00010004389)	GPAT4 (ENSSAUG00010004238)	POLR3D (ENSSAUG00010004192)	PHYHIP (ENSSAUG00010004174)	ppp1r3c2b (ENSSAUG00010004158)	gins4 (ENSSAUG00010004094)	arid5a (ENSSAUG00010024813)	dbnlb (ENSSAUG00010024767)
Perciformes	ANCESTRAL SPECIES	6	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b
Lumpfish	MODERN SPECIES	24	zgc:56596 (ENSCLMG00005018150)	ENSCLMG00005018130	DISP3 (ENSCLMG00005018129)	bmp1a (ENSCLMG00005012454)	ENSCLMG00005012393	ENSCLMG00005012392	ENSCLMG00005012390	ENSCLMG00005012389	ANTXR1 (ENSCLMG00005012386)	gfpt1 (ENSCLMG00005009082)	nfu1 (ENSCLMG00005009062)	zgc:103692 (ENSCLMG00005009061)	med22 (ENSCLMG00005009060)	AAK1 (ENSCLMG00005009057)	adrb3a (ENSCLMG00005009054)	got1l1 (ENSCLMG00005009052) ##22	prlhr2a (ENSCLMG00005009050)	ENSCLMG00005009047	adgra2 (ENSCLMG00005009043)	pdlim2 (ENSCLMG00005009040)	sorbs3 (ENSCLMG00005009039)	ENSCLMG00005009037	nkx6.3 (ENSCLMG00005009033)	inpp5l (ENSCLMG00005009030)	GPAT4 (ENSCLMG00005008772)	POLR3D (ENSCLMG00005008771)	PHYHIP (ENSCLMG00005008770)	ppp1r3c2b (ENSCLMG00005008768)	gins4 (ENSCLMG00005008766)	arid5a (ENSCLMG00005008765)	dbnlb (ENSCLMG00005008723)
Stickleback	MODERN SPECIES	12	ENSGACG00000010866	zgc:56596 (ENSGACG00000010872)	ENSGACG00000010881	DISP3 (ENSGACG00000010886)	bmp1a (ENSGACG00000010897)	kansl3 (ENSGACG00000010919)	ENSGACG00000010933	ANTXR1 (ENSGACG00000010935)	gfpt1 (ENSGACG00000010939)	nfu1 (ENSGACG00000010986)	zgc:103692 (ENSGACG00000010993)	med22 (ENSGACG00000011009)	AAK1 (ENSGACG00000011014)	adrb3a (ENSGACG00000011022)	ENSGACG00000011026	got1l1 (ENSGACG00000011027) ##22	prlhr2a (ENSGACG00000011038)	ENSGACG00000011041	adgra2 (ENSGACG00000011049)	pdlim2 (ENSGACG00000011056)	sorbs3 (ENSGACG00000011068)	nkx6.3 (ENSGACG00000011078)	ENSGACG00000011082	inpp5l (ENSGACG00000011085)	GPAT4 (ENSGACG00000011111)	POLR3D (ENSGACG00000011126)	PHYHIP (ENSGACG00000011140)	ppp1r3c2b (ENSGACG00000011154)	gins4 (ENSGACG00000011159)	dbnlb (ENSGACG00000011169)	ube2d4 (ENSGACG00000011172)
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000168891	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000159649	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00940000155648.A.a	ENSGT00390000003246	ENSGT00940000163584.b.b
Pike perch	MODERN SPECIES	2	ENSSLUG00000018590	ENSSLUG00000021047	zgc:56596 (ENSSLUG00000021055)	ENSSLUG00000003254	DISP3 (ENSSLUG00000003396)	bmp1a (ENSSLUG00000003682)	kansl3 (ENSSLUG00000006781)	ENSSLUG00000007749	ANTXR1 (ENSSLUG00000007786)	gfpt1 (ENSSLUG00000007913)	nfu1 (ENSSLUG00000008286)	zgc:103692 (ENSSLUG00000008294)	med22 (ENSSLUG00000008311)	ENSSLUG00000008329	adrb3a (ENSSLUG00000008393)	got1l1 (ENSSLUG00000008411) ##22	prlhr2a (ENSSLUG00000008417)	ENSSLUG00000008421	adgra2 (ENSSLUG00000008497)	pdlim2 (ENSSLUG00000009368)	sorbs3 (ENSSLUG00000009372)	SKIC3 (ENSSLUG00000009430)	arrdc3a (ENSSLUG00000009527)	adgrv1 (ENSSLUG00000009556)	lysmd3 (ENSSLUG00000009742)	ENSSLUG00000009746	mblac2 (ENSSLUG00000009749)	rtkna (ENSSLUG00000009754)	smn1 (ENSSLUG00000009765)	hspb11 (ENSSLUG00000009771)	LZTS1 (ENSSLUG00000009779)
Channel bull blenny	MODERN SPECIES	23	ENSCGOG00000003357	zgc:56596 (ENSCGOG00000003350)	ENSCGOG00000001704	DISP3 (ENSCGOG00000001575)	bmp1a (ENSCGOG00000000738)	kansl3 (ENSCGOG00000000382)	ENSCGOG00000000363	ENSCGOG00000000354	ANTXR1 (ENSCGOG00000000339)	gfpt1 (ENSCGOG00000000266)	nfu1 (ENSCGOG00000000187)	zgc:103692 (ENSCGOG00000000133)	med22 (ENSCGOG00000000114)	AAK1 (ENSCGOG00000023301)	adrb3a (ENSCGOG00000023294)	got1l1 (ENSCGOG00000023210) ##22	prlhr2a (ENSCGOG00000023200)	ENSCGOG00000023199	ENSCGOG00000023198	adgra2 (ENSCGOG00000023148)	pdlim2 (ENSCGOG00000023134)	sorbs3 (ENSCGOG00000023132)	ENSCGOG00000023126	ENSCGOG00000023125	ENSCGOG00000023123	nkx6.3 (ENSCGOG00000023121)	inpp5l (ENSCGOG00000023057)	GPAT4 (ENSCGOG00000022681)	POLR3D (ENSCGOG00000022652)	PHYHIP (ENSCGOG00000022650)	ppp1r3c2b (ENSCGOG00000022648)
Pinecone sodierfish	MODERN SPECIES	23	ENSMMDG00005024630	ENSMMDG00005024631	zgc:56596 (ENSMMDG00005024632)	ENSMMDG00005024633	ENSMMDG00005024638	bmp1a (ENSMMDG00005024639)	kansl3 (ENSMMDG00005024794)	ENSMMDG00005024795	ANTXR1 (ENSMMDG00005024796)	gfpt1 (ENSMMDG00005024798)	nfu1 (ENSMMDG00005024799)	zgc:103692 (ENSMMDG00005024800)	med22 (ENSMMDG00005024801)	AAK1 (ENSMMDG00005024802)	adrb3a (ENSMMDG00005024803)	got1l1 (ENSMMDG00005024804) ##22	prlhr2a (ENSMMDG00005024805)	ENSMMDG00005024806	adgra2 (ENSMMDG00005024807)	pdlim2 (ENSMMDG00005024808)	sorbs3 (ENSMMDG00005024809)	ENSMMDG00005024811	nkx6.3 (ENSMMDG00005024812)	inpp5l (ENSMMDG00005024813)	GPAT4 (ENSMMDG00005024814)	POLR3D (ENSMMDG00005024825)	PHYHIP (ENSMMDG00005024826)	ppp1r3c2b (ENSMMDG00005024827)	gins4 (ENSMMDG00005024828)	arid5a (ENSMMDG00005024829)	dbnlb (ENSMMDG00005024830)
Cod	MODERN SPECIES	19	ENSGMOG00000005626	zgc:56596 (ENSGMOG00000005653)	ENSGMOG00000005670	ENSGMOG00000035172	ENSGMOG00000005702	bmp1a (ENSGMOG00000005763)	kansl3 (ENSGMOG00000005793)	ENSGMOG00000026364	ENSGMOG00000027558	ENSGMOG00000005888	ENSGMOG00000005919	ENSGMOG00000005956	ENSGMOG00000005974	ENSGMOG00000005990	adrb3a (ENSGMOG00000029564)	got1l1 (ENSGMOG00000006061) ##22	prlhr2a (ENSGMOG00000030188)	ENSGMOG00000006078	adgra2 (ENSGMOG00000006114)	pdlim2 (ENSGMOG00000006149)	sorbs3 (ENSGMOG00000024396)	ENSGMOG00000006210	nkx6.3 (ENSGMOG00000006238)	inpp5l (ENSGMOG00000006249)	ENSGMOG00000006267	ENSGMOG00000006293	ENSGMOG00000006308	ENSGMOG00000035627	gins4 (ENSGMOG00000001837)	slc20a1a (ENSGMOG00000006328)	ENSGMOG00000031403
Protacanthopterygii	ANCESTRAL SPECIES	21	ENSGT00940000160355	ENSGT00950000182882.B	ENSGT00940000166050	ENSGT00940000154704.c.d	ENSGT00730000111022	ENSGT00940000155864.b.c.b	ENSGT00940000165180	ENSGT00940000157931	ENSGT00940000157176.a	ENSGT00390000007636	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00940000155968.d.b	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000157079.b.y	ENSGT00940000160545	ENSGT00390000015226.c	ENSGT01030000234574.B.c.b.b.m	ENSGT00390000013948.a	ENSGT00390000014563.b	ENSGT00390000003246	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b.b	ENSGT00940000160915
Salmoninae	ANCESTRAL SPECIES	17	ENSGT00940000158918.b	ENSGT00940000160355.g	ENSGT00950000182882.B.d	ENSGT00940000166050.j	ENSGT00730000111022.u	ENSGT00940000155864.b.c.b	ENSGT00940000165180.e	ENSGT00940000157931.g	ENSGT00940000157176.a.b	ENSGT00390000007636.m	ENSGT00940000156522.c.a.c	ENSGT00940000158488.a	ENSGT00940000164785	ENSGT00940000155968.d.b.d	ENSGT00940000158663.c.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a.d	ENSGT00940000165511.a.c	ENSGT00940000158941.e	ENSGT00940000160418.f	ENSGT00940000160558.q.a	ENSGT00940000157079.b.y.b
Salmoninae_a	ANCESTRAL SPECIES	31	ENSGT00940000158918.b	ENSGT00940000160355.g	ENSGT00950000182882.B.d	ENSGT00940000166050.j	ENSGT00730000111022.u	ENSGT00940000155864.b.c.b	ENSGT00940000165180.e	ENSGT00940000157931.g	ENSGT00940000157176.a.b	ENSGT00390000007636.m	ENSGT00940000156522.c.a.c	ENSGT00940000158488.a	ENSGT00940000164785	ENSGT00940000155968.d.b.d	ENSGT00940000158663.c.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a.d	ENSGT00940000165511.a.c	ENSGT00940000158941.e	ENSGT00940000160418.f	ENSGT00940000160558.q.a	ENSGT00940000157079.b.y.b	ENSGT00940000160545.e	ENSGT00390000015226.c.d	ENSGT01030000234574.B.c.b.b.m.d	ENSGT00390000013948.a.j	ENSGT00390000014563.b.b	ENSGT00390000003246.g	ENSGT00940000161253.i	ENSGT00940000156732.a.b.b.b	ENSGT00940000160915.w.a
Salmo	ANCESTRAL SPECIES	19	ENSGT00940000158918.b	ENSGT00940000160355.g	ENSGT00950000182882.B.d	ENSGT00940000166050.j	ENSGT00730000111022.u	ENSGT00940000155864.b.c.b	ENSGT00940000165180.e	ENSGT00940000157931.g	ENSGT00940000157176.a.b	ENSGT00390000007636.m	ENSGT00940000156522.c.a.c	ENSGT00940000158488.a	ENSGT00940000164785	ENSGT00940000155968.d.b.d	ENSGT00940000158663.c.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a.d	ENSGT00940000165511.a.c	ENSGT00940000158941.e	ENSGT00940000160418.f	ENSGT00940000160558.q.a	ENSGT00940000157079.b.y.b	ENSGT00940000160545.e	ENSGT00390000015226.c.d	ENSGT01030000234574.B.c.b.b.m.d	ENSGT00390000013948.a.j	ENSGT00390000014563.b.b	ENSGT00390000003246.g	ENSGT00940000161253.i	ENSGT00940000156732.a.b.b.b	ENSGT00940000160915.w.a
River trout	MODERN SPECIES	39	egr3 (ENSSTUG00000023921)	BIN3 (ENSSTUG00000023941)	ENSSTUG00000024021	zgc:56596 (ENSSTUG00000025993)	rab7b (ENSSTUG00000026009)	ENSSTUG00000026142	DISP3 (ENSSTUG00000026505)	bmp1a (ENSSTUG00000026747)	kansl3 (ENSSTUG00000032704)	ANTXR1 (ENSSTUG00000033151)	gfpt1 (ENSSTUG00000034072)	nfu1 (ENSSTUG00000035112)	AAK1 (ENSSTUG00000035146)	ENSSTUG00000035285	adrb3a (ENSSTUG00000035292)	got1l1 (ENSSTUG00000035306) ##22	prlhr2a (ENSSTUG00000035325)	ENSSTUG00000035333	adgra2 (ENSSTUG00000035350)	pdlim2 (ENSSTUG00000035675)	sorbs3 (ENSSTUG00000035683)	ENSSTUG00000035703	nkx6.3 (ENSSTUG00000035729)	inpp5l (ENSSTUG00000035836)	GPAT4 (ENSSTUG00000035866)	POLR3D (ENSSTUG00000036064)	PHYHIP (ENSSTUG00000036083)	gins4 (ENSSTUG00000036113)	ENSSTUG00000036124	DBNL (ENSSTUG00000036136)	ENSSTUG00000036263
Atlantic salmon	MODERN SPECIES	12	egr3 (ENSSSAG00000045986)	ENSSSAG00000121733	ENSSSAG00000122136	ENSSSAG00000046101	ubl4ab (ENSSSAG00000049676)	rab7b (ENSSSAG00000049695)	ENSSSAG00000049837	ptchd2 (ENSSSAG00000050283)	bmp1a (ENSSSAG00000051412)	kansl3 (ENSSSAG00000067840)	ANTXR1 (ENSSSAG00000067942)	ENSSSAG00000068110	ENSSSAG00000077955	AAK1 (ENSSSAG00000070524)	adrb3a (ENSSSAG00000071522)	got1l1 (ENSSSAG00000071526) ##22	prlhr2a (ENSSSAG00000071547)	ENSSSAG00000071549	adgra2 (ENSSSAG00000071595)	pdlim2 (ENSSSAG00000072965)	sorbs3 (ENSSSAG00000095155)	ENSSSAG00000072977	nkx6.3 (ENSSSAG00000072983)	inpp5l (ENSSSAG00000106967)	ENSSSAG00000073020	rpc4 (ENSSSAG00000073198)	ENSSSAG00000073215	ENSSSAG00000073224	ENSSSAG00000073230	ENSSSAG00000073238	ENSSSAG00000073416
Oncorhynchus	ANCESTRAL SPECIES	12	ENSGT00940000158918.b	ENSGT00940000160355.g	ENSGT00950000182882.B.d	ENSGT00940000166050.j	ENSGT00730000111022.u	ENSGT00940000155864.b.c.b	ENSGT00940000165180.e	ENSGT00940000157931.g	ENSGT00940000157176.a.b	ENSGT00390000007636.m	ENSGT00940000156522.c.a.c	ENSGT00940000158488.a	ENSGT00940000164785	ENSGT00940000155968.d.b.d	ENSGT00940000158663.c.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a.d	ENSGT00940000165511.a.c	ENSGT00940000158941.e	ENSGT00940000160418.f	ENSGT00940000160558.q.a	ENSGT00940000157079.b.y.b	ENSGT00940000160545.e	ENSGT00390000015226.c.d	ENSGT01030000234574.B.c.b.b.m.d	ENSGT00390000013948.a.j	ENSGT00390000014563.b.b	ENSGT00390000003246.g	ENSGT00940000163584.b.b	ENSGT00940000161253.i	ENSGT00940000156732.a.b.b.b
Oncorhynchus_a	ANCESTRAL SPECIES	15	ENSGT00940000158918.b	ENSGT00940000160355.g	ENSGT00950000182882.B.d	ENSGT00940000166050.j	ENSGT00730000111022.u	ENSGT00940000155864.b.c.b	ENSGT00940000165180.e	ENSGT00940000157931.g	ENSGT00940000157176.a.b	ENSGT00390000007636.m	ENSGT00940000156522.c.a.c	ENSGT00940000158488.a	ENSGT00940000164785	ENSGT00940000155968.d.b.d	ENSGT00940000158663.c.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.k.a.d	ENSGT00940000165511.a.c	ENSGT00940000158941.e	ENSGT00940000160418.f	ENSGT00940000160558.q.a	ENSGT00940000157079.b.y.b	ENSGT00940000160545.e	ENSGT00390000015226.c.d	ENSGT01030000234574.B.c.b.b.m.d	ENSGT00390000013948.a.j	ENSGT00390000014563.b.b	ENSGT00390000003246.g	ENSGT00940000163584.b.b	ENSGT00940000161253.i	ENSGT00940000156732.a.b.b.b
Chinook salmon	MODERN SPECIES	3	RHOBTB2 (ENSOTSG00005043072)	egr3 (ENSOTSG00005043071)	BIN3 (ENSOTSG00005043068)	ENSOTSG00005042477	zgc:56596 (ENSOTSG00005042467)	zgc:100918 (ENSOTSG00005042466)	ENSOTSG00005042335	DISP3 (ENSOTSG00005042325)	bmp1a (ENSOTSG00005032574)	kansl3 (ENSOTSG00005032485)	ANTXR1 (ENSOTSG00005032116)	gfpt1 (ENSOTSG00005031905)	nfu1 (ENSOTSG00005031901)	AAK1 (ENSOTSG00005031882)	adrb3a (ENSOTSG00005031878)	got1l1 (ENSOTSG00005031877) ##22	prlhr2a (ENSOTSG00005031876)	ENSOTSG00005031874	adgra2 (ENSOTSG00005031766)	pdlim2 (ENSOTSG00005031765)	sorbs3 (ENSOTSG00005031764)	ENSOTSG00005031762	nkx6.3 (ENSOTSG00005031761)	inpp5l (ENSOTSG00005031760)	GPAT4 (ENSOTSG00005031564)	POLR3D (ENSOTSG00005031560)	PHYHIP (ENSOTSG00005031559)	gins4 (ENSOTSG00005031558)	ENSOTSG00005031556	DBNL (ENSOTSG00005031553)	ube2d4 (ENSOTSG00005031505)
Coho salmon	MODERN SPECIES	28	ENSOKIG00005018641	egr3 (ENSOKIG00005018633)	BIN3 (ENSOKIG00005018623)	ENSOKIG00005017952	zgc:56596 (ENSOKIG00005017876)	rab7b (ENSOKIG00005017868)	ENSOKIG00005017610	DISP3 (ENSOKIG00005017566)	bmp1a (ENSOKIG00005012309)	kansl3 (ENSOKIG00005011681)	ANTXR1 (ENSOKIG00005010508)	ENSOKIG00005009533	nfu1 (ENSOKIG00005009459)	AAK1 (ENSOKIG00005009333)	ENSOKIG00005009298	got1l1 (ENSOKIG00005009266) ##22	ENSOKIG00005009229	adgra2 (ENSOKIG00005008943)	pdlim2 (ENSOKIG00005008906)	sorbs3 (ENSOKIG00005008869)	ENSOKIG00005008842	nkx6.3 (ENSOKIG00005008832)	inpp5l (ENSOKIG00005008777)	GPAT4 (ENSOKIG00005008231)	POLR3D (ENSOKIG00005008161)	PHYHIP (ENSOKIG00005008144)	gins4 (ENSOKIG00005008128)	arid5a (ENSOKIG00005008103)	DBNL (ENSOKIG00005008007)	ENSOKIG00005007973	TCF7L1 (ENSOKIG00005007716)
Rainbow trout	MODERN SPECIES	2	zgc:56596 (ENSOMYG00000004190)	rab7b (ENSOMYG00000004240)	ENSOMYG00000004481	ENSOMYG00000004726	bmp1a (ENSOMYG00000006062)	kansl3 (ENSOMYG00000006865)	ENSOMYG00000073752	ANTXR1 (ENSOMYG00000007706)	ENSOMYG00000074527	ENSOMYG00000005451	ENSOMYG00000008481	nfu1 (ENSOMYG00000008850)	AAK1 (ENSOMYG00000008895)	ENSOMYG00000022141	adrb3a (ENSOMYG00000008954)	got1l1 (ENSOMYG00000075478) ##22	prlhr2a (ENSOMYG00000008990)	ENSOMYG00000009036	adgra2 (ENSOMYG00000009153)	pdlim2 (ENSOMYG00000009254)	sorbs3 (ENSOMYG00000009298)	nkx6.3 (ENSOMYG00000009353)	inpp5l (ENSOMYG00000009423)	ENSOMYG00000009769	ENSOMYG00000010317	ENSOMYG00000010373	ENSOMYG00000075147	ENSOMYG00000010384	ENSOMYG00000010414	ENSOMYG00000072024	ENSOMYG00000010491
Huchen	MODERN SPECIES	1066													ENSHHUG00000011306	AAK1 (ENSHHUG00000011312)	adrb3a (ENSHHUG00000011361)	got1l1 (ENSHHUG00000011367) ##22	prlhr2a (ENSHHUG00000011382)	ENSHHUG00000011388	adgra2 (ENSHHUG00000011402)	pdlim2 (ENSHHUG00000011469)	sorbs3 (ENSHHUG00000011480)
Osteoglossiformes	ANCESTRAL SPECIES	73	ENSGT00940000166050	ENSGT00940000154704.c.c	ENSGT00730000111022	ENSGT00940000155864.b.c.b.a	ENSGT00940000165180	ENSGT00940000157931	ENSGT00860000136310	ENSGT00940000157176.a	ENSGT01060000252224	ENSGT00940000156522.c.a	ENSGT00940000158488	ENSGT00940000164785	ENSGT00940000155968.d.b	ENSGT00940000156575.r	ENSGT00940000158663.c	ENSGT00950000183082.b.a ##22	ENSGT00940000164214.i	ENSGT00940000165511.a	ENSGT00940000158941	ENSGT00940000160418	ENSGT00940000160558.n	ENSGT00940000160545.d	ENSGT01030000234574.B.c.b.b.l	ENSGT00940000172064	ENSGT01010000222294.c.a.b
Asian bonytongue	MODERN SPECIES	3	BIN3 (ENSSFOG00015012059)	ENSSFOG00015011932	ENSSFOG00015011819	zgc:56596 (ENSSFOG00015011795)	zgc:100918 (ENSSFOG00015011771)	ENSSFOG00015011681	DISP3 (ENSSFOG00015011458)	bmp1a (ENSSFOG00015011381)	ENSSFOG00015011361	ANTXR1 (ENSSFOG00015011296)	gfpt1 (ENSSFOG00015011230)	nfu1 (ENSSFOG00015011214)	AAK1 (ENSSFOG00015011173)	ANXA4 (ENSSFOG00015011133)	adrb3a (ENSSFOG00015011100)	got1l1 (ENSSFOG00015010962) ##22	ENSSFOG00015010935	ENSSFOG00015010911	adgra2 (ENSSFOG00015010856)	pdlim2 (ENSSFOG00015010824)	ENSSFOG00015030383	sorbs3 (ENSSFOG00015010750)	ENSSFOG00015010724	nkx6.3 (ENSSFOG00015010705)	inpp5l (ENSSFOG00015031355)	gpat4 (ENSSFOG00015010642)	POLR3D (ENSSFOG00015010611)	PHYHIP (ENSSFOG00015010599)	ppp1r3c2b (ENSSFOG00015010591)	gins4 (ENSSFOG00015010555)	gatd3l (ENSSFOG00015010529)
P. kingsleyae	MODERN SPECIES	118	zgc:56596 (ENSPKIG00000007895)	zgc:100918 (ENSPKIG00000007864)	ENSPKIG00000007846	ENSPKIG00000007780	ENSPKIG00000007737	bmp1a (ENSPKIG00000007711)	ENSPKIG00000007684	ANTXR1 (ENSPKIG00000007651)	gfpt1 (ENSPKIG00000007583)	nfu1 (ENSPKIG00000007527)	AAK1 (ENSPKIG00000007442)	ENSPKIG00000007348	ANXA4 (ENSPKIG00000007293)	adrb3a (ENSPKIG00000007256)	npm2a (ENSPKIG00000007241)	got1l1 (ENSPKIG00000007224) ##22	ENSPKIG00000007214	ENSPKIG00000007198	ENSPKIG00000007173	adgra2 (ENSPKIG00000007126)	pdlim2 (ENSPKIG00000007068)	sorbs3 (ENSPKIG00000006928)	ENSPKIG00000006878	nkx6.3 (ENSPKIG00000006868)	inpp5l (ENSPKIG00000006809)	gpat4 (ENSPKIG00000006751)	POLR3D (ENSPKIG00000006727)	PHYHIP (ENSPKIG00000006704)	ppp1r3c2b (ENSPKIG00000006693)	gins4 (ENSPKIG00000006669)	MALT1 (ENSPKIG00000006637)
Spotted gar	MODERN SPECIES	647	slc25a37 (ENSLOCG00000015013)	entpd4 (ENSLOCG00000015008) ##19	chmp7 (ENSLOCG00000015005)	lgi3 (ENSLOCG00000014999)	fgfr1b (ENSLOCG00000014985)	ENSLOCG00000014983	kctd9b (ENSLOCG00000014981)	actr1b (ENSLOCG00000014980)	ANTXR1 (ENSLOCG00000014974)	gfpt1 (ENSLOCG00000014971)	nfu1 (ENSLOCG00000014968)	AAK1 (ENSLOCG00000014966)	anxa4 (ENSLOCG00000014962)	adrb3a (ENSLOCG00000014961)	ENSLOCG00000014960	got1l1 (ENSLOCG00000014957) ##22	prlhr2b (ENSLOCG00000014955)	ENSLOCG00000014952	adgra2 (ENSLOCG00000014947)	pdlim2 (ENSLOCG00000014946)	sorbs3 (ENSLOCG00000014940)	RHOBTB2 (ENSLOCG00000014937)	egr3 (ENSLOCG00000014936)	BIN3 (ENSLOCG00000014932)	kansl3 (ENSLOCG00000014926)	npffr1l1 (ENSLOCG00000014924)	bmp1b (ENSLOCG00000014917)	atp6v1b2 (ENSLOCG00000014912)	LZTS1 (ENSLOCG00000014910)	gfra2a (ENSLOCG00000014902)	DOK2 (ENSLOCG00000014900)
Reedfish	MODERN SPECIES		adam28 (ENSECRG00000000255)	ppp3ccb (ENSECRG00000000256)	slc39a14 (ENSECRG00000000257)	piwil2 (ENSECRG00000000258)	nkx6.3 (ENSECRG00000000259)	inpp5l (ENSECRG00000000260)	gpat4 (ENSECRG00000000261)	ENSECRG00000000262	ENSECRG00000000263	ANTXR1 (ENSECRG00000000264)	nfu1 (ENSECRG00000000265)	AAK1 (ENSECRG00000000266)	anxa4 (ENSECRG00000000267)	adrb3a (ENSECRG00000000268)	ENSECRG00000000269	got1l1 (ENSECRG00000000270) ##22	ENSECRG00000000271	ENSECRG00000000272	brf2 (ENSECRG00000000273)	adgra2 (ENSECRG00000000274)	plpbp (ENSECRG00000000275)	ENSECRG00000000276	entpd4 (ENSECRG00000000277) ##19	ENSECRG00000000278	ENSECRG00000000279	stambpa (ENSECRG00000000280)	ENSECRG00000000281	ENSECRG00000000282	ENSECRG00000000283	ENSECRG00000000284	tcf7l1a (ENSECRG00000000285)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183082.b.a ##22
Lamprey	MODERN SPECIES	2442											ENSPMAG00000002001	ENSPMAG00000002005	ENSPMAG00000002008	pi4k2a (ENSPMAG00000002013) #35	ENSPMAG00000002022	ENSPMAG00000002024 ##22
Hagfish	MODERN SPECIES	601														ENSEBUG00000014723	ENSEBUG00000004102	ENSEBUG00000001335 ##22	ENSEBUG00000007647	dct (ENSEBUG00000015773)	ENSEBUG00000013187	rcbtb1 (ENSEBUG00000012865)
Ciona	ANCESTRAL SPECIES																	ENSGT00950000183082.b #22
Ciona savignyi	MODERN SPECIES	20	ENSCSAVG00000005579	ENSCSAVG00000005576	ENSCSAVG00000005573	ENSCSAVG00000005540	ENSCSAVG00000005538	ENSCSAVG00000005503	ENSCSAVG00000005494	ENSCSAVG00000005450	ENSCSAVG00000005443	ENSCSAVG00000005433	ENSCSAVG00000005430	ENSCSAVG00000005427	ENSCSAVG00000005425	ENSCSAVG00000005404	ENSCSAVG00000005401	ENSCSAVG00000004712 #22	ENSCSAVG00000004698	ENSCSAVG00000004691	ENSCSAVG00000004682	ENSCSAVG00000004175	ENSCSAVG00000004169	ENSCSAVG00000004126	ENSCSAVG00000004096	ENSCSAVG00000004094	ENSCSAVG00000004059	ENSCSAVG00000004039	ENSCSAVG00000004029	ENSCSAVG00000004024	ENSCSAVG00000004019	ENSCSAVG00000004015	ENSCSAVG00000003153
Ciona intestinalis	MODERN SPECIES	12	ENSCING00000022868	ENSCING00000001988	ENSCING00000023672	ENSCING00000013107	ENSCING00000019358	ENSCING00000023725	ENSCING00000001998	ENSCING00000020995	ENSCING00000013110	ENSCING00000013109	ENSCING00000001997	ENSCING00000002005	ENSCING00000002004	ENSCING00000002002	ENSCING00000013119	ENSCING00000008364 #22	ENSCING00000008366	ENSCING00000013118	ENSCING00000013117	ENSCING00000018761	ENSCING00000013115	ENSCING00000009842	ENSCING00000021584	ENSCING00000008368	ENSCING00000008371	ENSCING00000013114	ENSCING00000008372	ENSCING00000013113	ENSCING00000008374	ENSCING00000008375	ENSCING00000008363
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00950000183082.b #22
Caenorhabditis elegans	MODERN SPECIES	6	F39F10.2 (WBGene00018202)	F39F10.3 (WBGene00018203)	Y13C8A.1 (WBGene00021188)	acs-9 (WBGene00020634)	T20F7.1 (WBGene00020630)	aakg-2 (WBGene00020633)	T20F7.3 (WBGene00020631)	F41G4.8 (WBGene00018311)	dyla-1 (WBGene00018307)	F41G4.7 (WBGene00018310)	F41G4.13 (WBGene00304806)	sto-5 (WBGene00006067)	cas-1 (WBGene00000294)	mec-4 (WBGene00003168)	aak-2 (WBGene00020142)	got-1.2 (WBGene00020146) #22	T01C8.2 (WBGene00020143)	T01C8.3 (WBGene00020144)	mct-6 (WBGene00015676)	C10E2.1 (WBGene00015672)	C10E2.5 (WBGene00015675)	C10E2.2 (WBGene00015673)	hda-4 (WBGene00001837)	lgc-53 (WBGene00020657)	F22H10.1 (WBGene00017725)	F22H10.6 (WBGene00017730)	F22H10.11 (WBGene00255607)	F22H10.2 (WBGene00017726)	F22H10.3 (WBGene00017727)	tag-343 (WBGene00018374)	F43B10.1 (WBGene00018373)
Fruitfly	MODERN SPECIES	17	CG8399 (FBgn0034067)	casp (FBgn0034068)	CG8401 (FBgn0034069)	SP2353 (FBgn0034070)	CG8405 (FBgn0034071)	Dg (FBgn0034072)	mRpL34 (FBgn0083983)	CG8414 (FBgn0034073)	Rho1 (FBgn0014020)	Ric (FBgn0265605)	Asph (FBgn0034075)	Jhedup (FBgn0034076)	Jhe (FBgn0010052)	CG30095 (FBgn0050095)	spin (FBgn0086676)	Got1 (FBgn0001124) #22	CG30094 (FBgn0050094)	CysRS (FBgn0027091)	sotv (FBgn0029175)	CG10731 (FBgn0034081)	lbk (FBgn0034083)	CG10734 (FBgn0034082)	CG8435 (FBgn0034084)	Ptp52F (FBgn0034085)	Lis-1 (FBgn0015754)	CG8441 (FBgn0034086)	clu (FBgn0034087)	calypso (FBgn0262166)	CG44242 (FBgn0265177)	CG42837 (FBgn0262026)	CG44243 (FBgn0265178)
Bilateria	ANCESTRAL SPECIES																	ENSGT00950000183082.a ##22
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00950000183082.a ##22
Caenorhabditis elegans	DUPLICATION
Caenorhabditis elegans	MODERN SPECIES	6	T13C5.7 (WBGene00020487)	T13C5.2 (WBGene00020483)	T13C5.10 (WBGene00206360)	T13C5.9 (WBGene00195168)	ceh-54 (WBGene00020485)	daf-9 (WBGene00000905)	bca-1 (WBGene00000245)	mtp-18 (WBGene00077690)	T13C5.6 (WBGene00020486)	C14F11.7 (WBGene00015782)	lrch-1 (WBGene00015779)	lite-1 (WBGene00001803)	C14F11.4 (WBGene00015780)	hsp-43 (WBGene00002024)	rml-3 (WBGene00015781)	got-2.2 (WBGene00015778) ##22	W05H9.4 (WBGene00021051)	W05H9.2 (WBGene00021049)	W05H9.1 (WBGene00021048)	col-166 (WBGene00000739)	lev-9 (WBGene00002976)	mom-1 (WBGene00003394)	cest-16 (WBGene00020330)	T10E10.3 (WBGene00020420)	T10E10.4 (WBGene00020421)	col-167 (WBGene00000740)	col-168 (WBGene00000741)	col-169 (WBGene00000742)	col-170 (WBGene00000743)	col-171 (WBGene00000744)	C03B1.13 (WBGene00015381)
Caenorhabditis elegans	MODERN SPECIES		W09C3.4 (WBGene00021112)	chd-7 (WBGene00007053)	T04D1.2 (WBGene00020212)	unc-57 (WBGene00006791)	xnp-1 (WBGene00006961)	B0041.1 (WBGene00015006)	B0041.11 (WBGene00206362)	ain-2 (WBGene00015007)	ptps-1 (WBGene00015010)	B0041.12 (WBGene00303032)	B0041.5 (WBGene00015009)	B0041.8 (WBGene00015011)	rpl-4 (WBGene00004415)	lmd-2 (WBGene00015008)	Y119C1A.1 (WBGene00022466)	got-2.1 (WBGene00016652) ##22	acbp-1 (WBGene00016655)	ssb-1 (WBGene00016653)	ubr-4 (WBGene00016650)	C44E4.5 (WBGene00016654)	D1007.8 (WBGene00017005)	eaf-1 (WBGene00017011)	nrd-1 (WBGene00017004)	D1007.19 (WBGene00045048)	D1007.10 (WBGene00017007)	rpl-24.1 (WBGene00004436)	rps-10 (WBGene00004479)	tmem-39 (WBGene00017003)	D1007.4 (WBGene00017002)	D1007.18 (WBGene00044421)	D1007.3 (WBGene00017001)
Fruitfly	MODERN SPECIES	16	GlyP (FBgn0004507)	CG4259 (FBgn0031389)	CG12674 (FBgn0031388)	dpr3 (FBgn0053516)	Or22c (FBgn0026396)	Kebab (FBgn0028952)	Su(dx) (FBgn0003557)	lectin-22C (FBgn0259230)	CG42296 (FBgn0259192)	CG4238 (FBgn0031384)	Nplp4 (FBgn0040717)	CG15353 (FBgn0040718)	CG33543 (FBgn0053543)	Obp22a (FBgn0043539)	Npc2a (FBgn0031381)	Got2 (FBgn0001125) ##22	CG7289 (FBgn0031379)	CG15362 (FBgn0031378)	CG15356 (FBgn0031377)	Der-1 (FBgn0267972)	erm (FBgn0031375)	CG33673 (FBgn0053673)	CG15357 (FBgn0040719)	Wdr62 (FBgn0031374)	CG15358 (FBgn0031373)	CG7295 (FBgn0031372)	CG31663 (FBgn0051663)	wry (FBgn0051665)	c-cup (FBgn0031367)	CG31664 (FBgn0051664)	CG31933 (FBgn0051933)
Chordata	ANCESTRAL SPECIES																	ENSGT00950000183082.a ##22
Ciona	ANCESTRAL SPECIES	5									ENSGT00940000158037	ENSGT00940000168361.a	ENSGT00940000168361.b	ENSGT00940000159304.b	ENSGT00390000008785	ENSGT00940000166812.D	ENSGT00390000013315	ENSGT00950000183082.a ##22	ENSGT00940000157267	ENSGT00390000011908.y	ENSGT00530000068157	ENSGT00940000155300.g	ENSGT00940000156853.u	ENSGT00940000169014	ENSGT00940000167023.a	ENSGT00730000114127	ENSGT00530000064808.A	ENSGT00940000167385	ENSGT00390000000984
Ciona intestinalis	MODERN SPECIES	6	ENSCING00000003628	ENSCING00000011410	ENSCING00000003629	ENSCING00000003634	ENSCING00000003651	ENSCING00000011409	ENSCING00000023527	ENSCING00000003654	ENSCING00000003657	ENSCING00000017969	ENSCING00000011408	ENSCING00000003659	ENSCING00000003662	ENSCING00000021901	ins-l1 (ENSCING00000003666)	ENSCING00000003669 ##22	ENSCING00000010098	ENSCING00000003707	ENSCING00000021808	ENSCING00000022357	ENSCING00000022065	ENSCING00000011406	ENSCING00000019630	ENSCING00000010099	ENSCING00000021165	ENSCING00000015877	ENSCING00000003738	ENSCING00000022840	ENSCING00000011404	ENSCING00000003762	ENSCING00000003777
Ciona savignyi	MODERN SPECIES	93	ENSCSAVG00000007003	ENSCSAVG00000007007	ENSCSAVG00000007241	ENSCSAVG00000007279	ENSCSAVG00000007281	ENSCSAVG00000007288	ENSCSAVG00000007310	ENSCSAVG00000007313	ENSCSAVG00000007322	ENSCSAVG00000007324	ENSCSAVG00000007326	ENSCSAVG00000007329	ENSCSAVG00000007331	ENSCSAVG00000007334	ENSCSAVG00000007338	ENSCSAVG00000007375 ##22	ENSCSAVG00000007452	ENSCSAVG00000007456	ENSCSAVG00000007459	ENSCSAVG00000007463	ENSCSAVG00000007625	ENSCSAVG00000007626	ENSCSAVG00000007631	ENSCSAVG00000007635	ENSCSAVG00000007638	ENSCSAVG00000007641	ENSCSAVG00000007647	ENSCSAVG00000007653	ENSCSAVG00000007662	ENSCSAVG00000007817	ENSCSAVG00000007849
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183082.a ##22
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183082.a ##22
Lamprey	MODERN SPECIES	2														MMP24 (ENSPMAG00000001746)	ENSPMAG00000001742	got2b (ENSPMAG00000001719) ##22	st3gal2 (ENSPMAG00000001703)	lonp2 (ENSPMAG00000001687)	siah1 (ENSPMAG00000001685)	mbtps1 (ENSPMAG00000001643)	ENSPMAG00000001642	hydin (ENSPMAG00000001615)	twsg1a (ENSPMAG00000001612)	ENSPMAG00000001607
Hagfish	MODERN SPECIES	90	GABBR1 (ENSEBUG00000003960)	aars1 (ENSEBUG00000004521)	ENSEBUG00000006208	ENSEBUG00000010892	ENSEBUG00000014407	cnot10 (ENSEBUG00000014450)	ENSEBUG00000016419	ENSEBUG00000008055	ELMO1 (ENSEBUG00000012797)	ENSEBUG00000013697	ENSEBUG00000011290	ENSEBUG00000015900	ENSEBUG00000012297	cog4 (ENSEBUG00000013243)	ENSEBUG00000004711	got2b (ENSEBUG00000005634) ##22	ENSEBUG00000005825	ENSEBUG00000014114	ENSEBUG00000006520	ENSEBUG00000012554	ENSEBUG00000010805	ENSEBUG00000006009	ENSEBUG00000015709	ENSEBUG00000008223	cox5aa (ENSEBUG00000007464)	ENSEBUG00000015319	ENSEBUG00000011645	ENSEBUG00000008746	ENSEBUG00000013962	ENSEBUG00000013127	ENSEBUG00000008526
Gnathostomata	ANCESTRAL SPECIES	1543																ENSGT00950000183082.a ##22	ENSGT00960000186694
Elephant shark	MODERN SPECIES	2387																got2a (ENSCMIG00000006377) ##22	ENSCMIG00000006384
Euteleostomi	ANCESTRAL SPECIES	365												ENSGT00940000161773	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00390000014869	ENSGT00940000153577.C
Actinopterygii	ANCESTRAL SPECIES	165	ENSGT00940000155112.A	ENSGT00390000004877	ENSGT00950000183211.a.a.b	ENSGT00510000047791	ENSGT00530000063853.a.b	ENSGT00940000157041.a	ENSGT00940000158494	ENSGT00490000043404	ENSGT00390000006658.b	ENSGT00940000157764	ENSGT00950000183131.b.b	ENSGT00940000161773	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00390000014869	ENSGT00940000153577.C
Reedfish	MODERN SPECIES	17	nutf2 (ENSECRG00000007864)	edc4 (ENSECRG00000007835)	NRN1L (ENSECRG00000007813)	pskh1 (ENSECRG00000007802)	ENSECRG00000007780	mbtps1 (ENSECRG00000007716)	OSGIN1 (ENSECRG00000007679)	SLC38A8 (ENSECRG00000007658)	necab2 (ENSECRG00000007640)	ENSECRG00000007632	hydin (ENSECRG00000007560)	hydin (ENSECRG00000007453)	cmtr2 (ENSECRG00000007412)	pnp6 (ENSECRG00000007405)	calb2a (ENSECRG00000007394)	got2a (ENSECRG00000007297) ##22	ENSECRG00000007269	slc38a7 (ENSECRG00000007252)	ENSECRG00000007230	si:ch211-122f10.4 (ENSECRG00000007208)	cnot1 (ENSECRG00000007184)	cnot1 (ENSECRG00000007161)	ENSECRG00000007148	setd6 (ENSECRG00000007134)	gfod2 (ENSECRG00000007128)	ENSECRG00000007124	ENSECRG00000007119	ENSECRG00000007109	pard6a (ENSECRG00000007097)	ENSECRG00000007086	carmil2 (ENSECRG00000007041)
Neopterygii	ANCESTRAL SPECIES	22	ENSGT00390000004877	ENSGT00950000183211.a.a.b	ENSGT00940000154285.b.b.d	ENSGT00510000047791	ENSGT00530000063853.a.b	ENSGT00940000157041.a	ENSGT00940000158494	ENSGT00490000043404	ENSGT00390000006658.b	ENSGT00940000157764	ENSGT00950000183131.b.b	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000154294	ENSGT00630000089910	ENSGT00940000158945	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000163301.c.a	ENSGT00940000163301.c.b	ENSGT00940000156252	ENSGT00940000159455	ENSGT00940000160637	ENSGT00390000008139	ENSGT00940000157918	ENSGT00940000154022.a.a
Spotted gar	MODERN SPECIES	662	ENSLOCG00000006761	tsnaxip1 (ENSLOCG00000006745)	thap11 (ENSLOCG00000017596)	nutf2 (ENSLOCG00000006733)	edc4 (ENSLOCG00000006715)	nrn1lb (ENSLOCG00000006700)	pskh1 (ENSLOCG00000006672)	DNAAF1 (ENSLOCG00000006656)	mbtps1 (ENSLOCG00000006637)	SLC38A8 (ENSLOCG00000006623)	necab2 (ENSLOCG00000006599)	hydin (ENSLOCG00000006542)	cmtr2 (ENSLOCG00000017595)	pnp6 (ENSLOCG00000006511)	calb2a (ENSLOCG00000006495)	got2a (ENSLOCG00000006474) ##22	ENSLOCG00000006435	slc38a7 (ENSLOCG00000006410)	ENSLOCG00000006377	si:ch211-122f10.4 (ENSLOCG00000006351)	cnot1 (ENSLOCG00000006324)	setd6 (ENSLOCG00000006305)	si:dkey-286h2.3 (ENSLOCG00000006287)	e2f4 (ENSLOCG00000006277)	ELMO3 (ENSLOCG00000006255)	ENSLOCG00000006224	tmem208 (ENSLOCG00000006204)	katnb1 (ENSLOCG00000006166)	KIFC3 (ENSLOCG00000006130)	ENSLOCG00000006113	MMP15 (ENSLOCG00000006100)
Osteoglossocephalai	ANCESTRAL SPECIES		ENSGT00950000183211.a.a.b	ENSGT00940000154285.b.b.d	ENSGT00510000047791	ENSGT00530000063853.a.b	ENSGT00940000157041.a	ENSGT00490000043404	ENSGT00940000157764.e.b	ENSGT00390000006658.b	ENSGT00940000157764.f	ENSGT00950000183131.b.b	ENSGT00940000163228	ENSGT00950000183108.b.a.a.i.a	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000163301.c.a	ENSGT00940000163301.c.b	ENSGT00940000156252	ENSGT00940000159455	ENSGT00940000160637	ENSGT00390000008139	ENSGT00940000157918	ENSGT00940000154022.a.a	ENSGT00940000162283.b	ENSGT00940000162283.a
Osteoglossiformes	ANCESTRAL SPECIES	26	ENSGT00940000158257	ENSGT00390000018598	ENSGT00390000006585.a	ENSGT00510000047030.d.c.a	ENSGT00510000047791.h	ENSGT00530000063853.a.b.b	ENSGT00940000157041.a	ENSGT00490000043404	ENSGT00390000006658.b	ENSGT00940000157764.f	ENSGT00950000183131.b.b.a	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b.c	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000154294	ENSGT00880000138014.a	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000163301.c.a	ENSGT00940000156252.ob.a	ENSGT00940000159455	ENSGT00940000160637	ENSGT00390000008139	ENSGT00940000157918	ENSGT00940000154022.a.a.n	ENSGT00940000162283.a	ENSGT00940000156939.g	ENSGT00940000158295
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	10	ENSPKIG00000002011	sec11a (ENSPKIG00000002027)	ENSPKIG00000002050	gfod2 (ENSPKIG00000002063)	ENSPKIG00000002084	thap11 (ENSPKIG00000002111)	ENSPKIG00000002135	edc4 (ENSPKIG00000002209)	NRN1L (ENSPKIG00000002345)	ENSPKIG00000002381	SLC38A8 (ENSPKIG00000002452)	NECAB2 (ENSPKIG00000002529)	ENSPKIG00000002557	pnp6 (ENSPKIG00000002570)	CALB2 (ENSPKIG00000002590)	GOT2 (ENSPKIG00000002625) ##22	ENSPKIG00000002676	slc38a7 (ENSPKIG00000002694)	ENSPKIG00000002753	si:ch211-122f10.4 (ENSPKIG00000002800)	cnot1 (ENSPKIG00000002914)	e2f4 (ENSPKIG00000003228)	ENSPKIG00000003274	ENSPKIG00000003285	ENSPKIG00000003295	KIFC3 (ENSPKIG00000003347)	ENSPKIG00000003461	MMP15 (ENSPKIG00000003509)	ENSPKIG00000003570	zpd (ENSPKIG00000003623)	slc7a6os (ENSPKIG00000003646)
P. kingsleyae	MODERN SPECIES	23	ENSPKIG00000001236	thap11 (ENSPKIG00000001208)	nutf2 (ENSPKIG00000001172)	edc4 (ENSPKIG00000001025)	NRN1L (ENSPKIG00000000954)	ENSPKIG00000000935	pskh1 (ENSPKIG00000000919)	mbtps1 (ENSPKIG00000000838)	OSGIN1 (ENSPKIG00000000797)	SLC38A8 (ENSPKIG00000000773)	necab2 (ENSPKIG00000000740)	hydin (ENSPKIG00000000601)	cmtr2 (ENSPKIG00000023749)	pnp6 (ENSPKIG00000023736)	calb2b (ENSPKIG00000023716)	ENSPKIG00000023683 ##22	ENSPKIG00000023666	cnot1 (ENSPKIG00000023538)	setd6 (ENSPKIG00000023460)	si:dkey-286h2.3 (ENSPKIG00000023336)	e2f4 (ENSPKIG00000023286)	ENSPKIG00000023273	ELMO3 (ENSPKIG00000023256)	ENSPKIG00000023243	tmem208 (ENSPKIG00000023228)	katnb1 (ENSPKIG00000023208)	KIFC3 (ENSPKIG00000023180)	ENSPKIG00000023155	MMP15 (ENSPKIG00000023125)	slc7a6 (ENSPKIG00000023084)	ccdc102a (ENSPKIG00000023041)
Asian bonytongue	MODERN SPECIES		pard6a (ENSSFOG00015011053)	ENSSFOG00015011029	ENSSFOG00015011008	gfod2 (ENSSFOG00015024924)	ENSSFOG00015010969	ENSSFOG00015010955	NUTF2 (ENSSFOG00015010919)	edc4 (ENSSFOG00015010819)	NRN1L (ENSSFOG00015028953)	ENSSFOG00015010776	ENSSFOG00015010754	SLC38A8 (ENSSFOG00015031580)	ENSSFOG00015010710	pnp6 (ENSSFOG00015010688)	calb2a (ENSSFOG00015010665)	got2a (ENSSFOG00015005990) ##22	slc38a7 (ENSSFOG00015016162)	ENSSFOG00015015676	si:ch211-122f10.4 (ENSSFOG00015015578)	e2f4 (ENSSFOG00015015554)	ENSSFOG00015015543	ENSSFOG00015030986	ENSSFOG00015032328	KIFC3 (ENSSFOG00015015376)	ENSSFOG00015015146	MMP15 (ENSSFOG00015015101)	ENSSFOG00015015088	zpd (ENSSFOG00015015067)	slc7a6os (ENSSFOG00015030815)	ENSSFOG00015030328	ENSSFOG00015015021
Clupeocephala	ANCESTRAL SPECIES	2	ENSGT00950000183211.a.a.b	ENSGT00940000158257	ENSGT00390000018598	ENSGT00940000165060	ENSGT00510000047030.d	ENSGT00510000047791	ENSGT00530000063853.a.b.c	ENSGT00940000157041.a	ENSGT00490000043404	ENSGT00940000157764.e.b	ENSGT00950000183131.b.b	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000165046.b	ENSGT00940000166578	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00390000013269	ENSGT00940000164605	ENSGT00530000064251	ENSGT00510000048902.b	ENSGT00940000156682.e.b	ENSGT00390000015368.a.b	ENSGT00940000159268	ENSGT00530000063847.a	ENSGT00940000156205.h	ENSGT00940000156291.f
Otomorpha	ANCESTRAL SPECIES		ENSGT00940000153717.b.g	ENSGT00940000166017	ENSGT00950000183211.a.a.b	ENSGT00940000158257	ENSGT00940000165060	ENSGT00510000047030.d	ENSGT00510000047791	ENSGT00530000063853.a.b.c	ENSGT00940000157041.a	ENSGT00490000043404	ENSGT00940000157764.e.b	ENSGT00950000183131.b.b	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000165046.b	ENSGT00940000166578	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00390000013269	ENSGT00940000164605.f	ENSGT00530000064251	ENSGT00510000048902.b	ENSGT00940000156682.e.b	ENSGT00390000015368.a.b	ENSGT00940000159268	ENSGT00530000063847.a	ENSGT00940000156205.h	ENSGT00940000156291.f
Otophysi	ANCESTRAL SPECIES	4	ENSGT00940000153717.b.g	ENSGT00940000166017	ENSGT00950000183211.a.a.b	ENSGT00940000158257	ENSGT00940000165060	ENSGT00510000047030.d	ENSGT00510000047791	ENSGT00530000063853.a.b.c	ENSGT00940000157041.a	ENSGT00490000043404	ENSGT00940000157764.e.b	ENSGT00950000183131.b.b	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00950000183082.a ##22	ENSGT00940000165046.b	ENSGT00940000166578	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00390000013269	ENSGT00940000164605.f	ENSGT00530000064251	ENSGT00510000048902.b	ENSGT00940000156682.e.b	ENSGT00390000015368.a.b	ENSGT00940000159268	ENSGT00530000063847.a	ENSGT00940000158293	ENSGT00940000158567	ENSGT00880000138051.a
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	131				ENSGT00390000004737.b.a	ENSGT00550000074828.a	ENSGT00940000157180.b	ENSGT00390000001149	ENSGT00730000110905.a	ENSGT00390000007087	ENSGT00940000171027	ENSGT00940000161192	ENSGT00530000062962.b.a.e	ENSGT00940000160694.g.b	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a.e ##22	ENSGT00940000158136	ENSGT00390000005535	ENSGT00940000164949	ENSGT00950000182838.A.a.b	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000163235.A.a.b	ENSGT01040000240607	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000163235.A.a.a.b	ENSGT00390000013104	ENSGT00390000013315	ENSGT00940000157089.B	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A
Characiphysae_b	ANCESTRAL SPECIES	4	ENSGT01090000260005.a.b.b	ENSGT00940000157398.i.a	ENSGT00950000182841.b.a.b.a.b	ENSGT00390000004737.b.a	ENSGT00550000074828.a	ENSGT00940000157180.b	ENSGT00390000001149	ENSGT00730000110905.a	ENSGT00390000007087	ENSGT00940000171027	ENSGT00940000161192	ENSGT00530000062962.b.a.e	ENSGT00940000160694.g.b	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a.e ##22	ENSGT00940000158136	ENSGT00390000005535	ENSGT00940000164949	ENSGT00950000182838.A.a.b	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000163235.A.a.b	ENSGT01040000240607	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000163235.A.a.a.b	ENSGT00390000013104	ENSGT00390000013315	ENSGT00940000157089.B	ENSGT00940000158287
Electric eel	MODERN SPECIES	475													ENSEEEG00000003879	cmtr2 (ENSEEEG00000003880)	calb2b (ENSEEEG00000003881)	ENSEEEG00000003887 ##22	slc38a7 (ENSEEEG00000003891)	mrpl21 (ENSEEEG00000003906)	ENSEEEG00000003908	AP2A2 (ENSEEEG00000003911)	ENSEEEG00000003924	ENSEEEG00000003926	ENSEEEG00000003927	ENSEEEG00000003928	ENSEEEG00000003929	ENSEEEG00000003930	ENSEEEG00000003931	tollip (ENSEEEG00000003932)	slc35c1 (ENSEEEG00000003933)	MAPK8IP1 (ENSEEEG00000003934)	ENSEEEG00000003942
Characiphysae	ANCESTRAL SPECIES	260													ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00990000203752	ENSGT00950000183082.a.f ##22	ENSGT00940000165046.b
Channel catfish	MODERN SPECIES	23	ENSIPUG00000000198	lmo2 (ENSIPUG00000000195)	ENSIPUG00000000179	ENSIPUG00000023478	ENSIPUG00000023465	prdm10 (ENSIPUG00000023413)	ENSIPUG00000023406	aplp2 (ENSIPUG00000023373)	st14a (ENSIPUG00000023361)	ENSIPUG00000023359	KCNJ1 (ENSIPUG00000023354)	ENSIPUG00000023351	PNP (ENSIPUG00000023340)	calb2a (ENSIPUG00000023316)	ENSIPUG00000023309	got2a (ENSIPUG00000023297) ##22	si:dkey-12e7.4 (ENSIPUG00000023296)	ENSIPUG00000023290	chka (ENSIPUG00000023272)	suv420h1 (ENSIPUG00000023257)	si:dkey-12e7.1 (ENSIPUG00000023255)	ANPEP (ENSIPUG00000023238)	arpin (ENSIPUG00000023229)	fam169b (ENSIPUG00000023226)	igf1r (ENSIPUG00000023195)	pgpep1l (ENSIPUG00000023192)	ENSIPUG00000023186	synm (ENSIPUG00000023183)	cttnbp2 (ENSIPUG00000023165)	cftr (ENSIPUG00000023141)	asz1 (ENSIPUG00000023130)
Characiphysae_b	ANCESTRAL SPECIES	289													ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00990000203752	ENSGT00950000183082.a.f ##22	ENSGT00940000165046.b
Characoidei	ANCESTRAL SPECIES	406													ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00990000203752	ENSGT00950000183082.a.f ##22	ENSGT00940000165046.b
Mexicana tetra	MODERN SPECIES	152													pnp6 (ENSAMXG00000020615)	calb2a (ENSAMXG00000020621)	ENSAMXG00000037514	got2a (ENSAMXG00000036798) ##22	si:dkey-12e7.4 (ENSAMXG00000020636)	ENSAMXG00000020638
Red-bellied piranha	MODERN SPECIES														pnp6 (ENSPNAG00000012442)	calb2a (ENSPNAG00000012479)	ENSPNAG00000012497	got2a (ENSPNAG00000012518) ##22	si:dkey-12e7.4 (ENSPNAG00000002286)	ENSPNAG00000012547	chka (ENSPNAG00000012588)	kmt5b (ENSPNAG00000006296)	si:dkey-12e7.1 (ENSPNAG00000002325)	anpeplb (ENSPNAG00000002353)	arpin (ENSPNAG00000002359)	ENSPNAG00000002366	igf1ra (ENSPNAG00000012748)	PGPEP1L (ENSPNAG00000012782)	synm (ENSPNAG00000002401)	CTTNBP2 (ENSPNAG00000012854)	cftr (ENSPNAG00000013628)	asz1 (ENSPNAG00000013667)	wnt2 (ENSPNAG00000002887)
Electric eel	MODERN SPECIES	74	pard6a (ENSEEEG00000022790)	ranbp10 (ENSEEEG00000022789)	tsnaxip1 (ENSEEEG00000022787)	nutf2 (ENSEEEG00000022785)	edc4 (ENSEEEG00000022615)	NRN1L (ENSEEEG00000022593)	pskh1 (ENSEEEG00000022590)	mbtps1 (ENSEEEG00000022180)	SLC38A8 (ENSEEEG00000022140)	necab2 (ENSEEEG00000022137)	ENSEEEG00000022129	ENSEEEG00000022128	pnp6 (ENSEEEG00000022125)	calb2a (ENSEEEG00000022119)	ENSEEEG00000022117	got2a (ENSEEEG00000021685) ##22	chka (ENSEEEG00000021639)	kmt5b (ENSEEEG00000021635)	si:dkey-12e7.1 (ENSEEEG00000021634)	anpeplb (ENSEEEG00000021598)	arpin (ENSEEEG00000021590)	ENSEEEG00000021587	igf1ra (ENSEEEG00000021572)	ENSEEEG00000021569	synm (ENSEEEG00000021567)	CTTNBP2 (ENSEEEG00000021553)	cftr (ENSEEEG00000021552)	ENSEEEG00000021551	wnt2 (ENSEEEG00000021550)	bcl2l13 (ENSEEEG00000021548)	bida (ENSEEEG00000021547)
Cyprinoidei	ANCESTRAL SPECIES	10	ENSGT00940000166017	ENSGT00950000183211.a.a.b	ENSGT00940000158257	ENSGT00940000165060	ENSGT00510000047030.d	ENSGT00510000047791	ENSGT00530000063853.a.b.c	ENSGT00940000157041.a	ENSGT00390000018637	ENSGT00490000043404	ENSGT00940000157764.e.b	ENSGT00950000183131.b.b	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00950000183082.a ##22	ENSGT00940000165046.b	ENSGT00940000166578	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00390000013269	ENSGT00940000164605.f	ENSGT00530000064251	ENSGT00510000048902.b	ENSGT00940000156682.e.b	ENSGT00390000015368.a.b	ENSGT00940000159268	ENSGT00530000063847.a	ENSGT00940000158293	ENSGT00940000158567	ENSGT00880000138051.a
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	9	zgc:158868 (ENSDARG00000069379)	pard6a (ENSDARG00000069378)	ranbp10 (ENSDARG00000062138)	tsnaxip1 (ENSDARG00000030512)	nutf2 (ENSDARG00000056531)	edc4 (ENSDARG00000062266)	nrn1la (ENSDARG00000069368)	pskh1 (ENSDARG00000056713)	fan1 (ENSDARG00000062269)	mbtps1 (ENSDARG00000014634)	slc38a8a (ENSDARG00000009482)	necab2 (ENSDARG00000056745)	hydin (ENSDARG00000056764)	pnp6 (ENSDARG00000040942)	calb2a (ENSDARG00000041062)	got2a (ENSDARG00000041068) ##22	si:dkey-12e7.4 (ENSDARG00000041073)	ENSDARG00000107077	chka (ENSDARG00000041078)	kmt5b (ENSDARG00000041081)	si:dkey-12e7.1 (ENSDARG00000069328)	anpeplb (ENSDARG00000041083)	arpin (ENSDARG00000041085)	ENSDARG00000069321	igf1ra (ENSDARG00000027423)	PGPEP1L (ENSDARG00000041092)	synm (ENSDARG00000062350)	TTC23 (ENSDARG00000022160)	CTTNBP2 (ENSDARG00000040991)	cftr (ENSDARG00000041107)	asz1 (ENSDARG00000004823)
Zebrafish	MODERN SPECIES	22	PAQR9 (ENSDARG00000052059)	ankrd46b (ENSDARG00000015780)	ENSDARG00000052061	col4a5 (ENSDARG00000052063)	gc2 (ENSDARG00000018329)	rasl11a (ENSDARG00000046013)	ENSDARG00000074367	arhgap36 (ENSDARG00000059672)	NHSL2 (ENSDARG00000089066)	rps4x (ENSDARG00000014690)	cited1 (ENSDARG00000077769)	hdac8 (ENSDARG00000003021)	PHKA1 (ENSDARG00000105159)	leap2 (ENSDARG00000104654)	bmp15 (ENSDARG00000037491)	got2b (ENSDARG00000005840) ##22	ENSDARG00000113187	slc38a7 (ENSDARG00000012002)	si:ch211-122f10.4 (ENSDARG00000052074)	cyp2x10.2 (ENSDARG00000006501)	ENSDARG00000068283	ENSDARG00000092091	si:dkey-286h2.3 (ENSDARG00000068290)	ENSDARG00000091514	tmem208 (ENSDARG00000068291)	katnb1 (ENSDARG00000005456)	SLCO3A1 (ENSDARG00000068296)	gnrhr2 (ENSDARG00000003553)	ENSDARG00000087191	MYZAP (ENSDARG00000075017)	CGNL1 (ENSDARG00000015805)
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	30	ENSGT00940000153717.b.g.g	ENSGT00940000166017.c	ENSGT00950000183211.a.a.b.j	ENSGT00940000158257.a	ENSGT00940000165060	ENSGT00510000047791.j	ENSGT00530000063853.a.b.c	ENSGT00940000157041.a.m.a	ENSGT00390000018637.c	ENSGT00490000043404.b	ENSGT00940000157764.e.b.d	ENSGT00950000183131.b.b.c	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b.f	ENSGT00950000183108.b.a.a.i.b.b	ENSGT00950000183082.a.i.a ##22	ENSGT00940000165046.b	ENSGT00940000166578.a	ENSGT00950000182939.a.b.b.c	ENSGT00940000156431.f	ENSGT00390000013269.c	ENSGT00940000164605.f.b	ENSGT00530000064251.a	ENSGT00940000156682.e.b.a	ENSGT00390000015368.a.b	ENSGT00940000159268.t	ENSGT00530000063847.a.d	ENSGT00940000158293.t	ENSGT00940000158567.c	ENSGT00880000138051.a.c	ENSGT00940000159231.b
Goldfish	MODERN SPECIES	9	tsnaxip1 (ENSCARG00000027094)	ranbp10 (ENSCARG00000026694)	pard6a (ENSCARG00000026658)	ENSCARG00000026387	ripor1 (ENSCARG00000026226)	ctcf (ENSCARG00000026127)	carmil2 (ENSCARG00000025958)	tmem170a (ENSCARG00000025935)	cfdp1 (ENSCARG00000025911)	bcar1 (ENSCARG00000025688)	nudt21 (ENSCARG00000025643)	hsf4 (ENSCARG00000025618)	ENSCARG00000025560	pnp6 (ENSCARG00000025526)	calb2a (ENSCARG00000025448)	got2a (ENSCARG00000024911) ##22	si:dkey-12e7.4 (ENSCARG00000024888)	ENSCARG00000024884	chka (ENSCARG00000024760)	kmt5b (ENSCARG00000024726)	si:dkey-12e7.1 (ENSCARG00000024715)	anpeplb (ENSCARG00000024667)	arpin (ENSCARG00000024639)	igf1ra (ENSCARG00000018479)	ENSCARG00000018260	CTTNBP2 (ENSCARG00000018245)	cftr (ENSCARG00000018002)	asz1 (ENSCARG00000017932)	wnt2 (ENSCARG00000017917)	bcl2l13 (ENSCARG00000017903)	bida (ENSCARG00000017898)
Cyprininae_a	ANCESTRAL SPECIES	209	ENSGT00940000153717.b.g.h	ENSGT00940000166017.d	ENSGT00950000183211.a.a.b.i	ENSGT00940000158257.b	ENSGT00940000165060	ENSGT00510000047791.j	ENSGT00940000157041.a.m.a	ENSGT00940000157041.a.n	ENSGT00390000018637.c	ENSGT00490000043404.b	ENSGT00940000157764.e.b.d	ENSGT00950000183131.b.b.c	ENSGT00940000163228.gc.a	ENSGT00950000182991.A.a.c.b.f	ENSGT00950000183108.b.a.a.i.b.b	ENSGT00950000183082.a.i.a ##22	ENSGT01070000255819	ENSGT00940000165046.b	ENSGT00940000166578.a	ENSGT00950000182939.a.b.b.c	ENSGT00940000156431.f	ENSGT00390000013269.c	ENSGT00940000164605.f.b	ENSGT00530000064251.a	ENSGT00940000156682.e.b.a	ENSGT00390000015368.a.b	ENSGT00940000159268.t	ENSGT00530000063847.a.d	ENSGT00940000158293.t	ENSGT00940000158567.c	ENSGT00880000138051.a.c
Common carp reference	MODERN SPECIES	19	ripor1 (ENSCCRG00000023685)	ENSCCRG00000076694	pard6a (ENSCCRG00000019893)	ranbp10 (ENSCCRG00000023756)	tsnaxip1 (ENSCCRG00000023782)	nutf2 (ENSCCRG00000080103)	edc4 (ENSCCRG00000069056)	pskh1 (ENSCCRG00000067737)	fan1 (ENSCCRG00000034584)	mbtps1 (ENSCCRG00000024572)	ENSCCRG00000045709	necab2 (ENSCCRG00000045718)	hydin (ENSCCRG00000074675)	pnp6 (ENSCCRG00000065951)	calb2a (ENSCCRG00000008759)	got2a (ENSCCRG00000009061) ##22	ENSCCRG00000081863	si:dkey-12e7.4 (ENSCCRG00000008891)	ENSCCRG00000008894	chka (ENSCCRG00000008909)	kmt5b (ENSCCRG00000025233)	si:dkey-12e7.1 (ENSCCRG00000063032)	anpeplb (ENSCCRG00000025257)	arpin (ENSCCRG00000025266)	igf1ra (ENSCCRG00000007453)	ENSCCRG00000007412	synm (ENSCCRG00000012024)	ENSCCRG00000065122	ENSCCRG00000024189	cftr (ENSCCRG00000024459)	ENSCCRG00000066992
Golden-line barbel	MODERN SPECIES	224	pard6a (ENSSGRG00000048543)	ranbp10 (ENSSGRG00000048546)	nutf2 (ENSSGRG00000048826)	edc4 (ENSSGRG00000048856)	NRN1L (ENSSGRG00000049739)	pskh1 (ENSSGRG00000049740)	fan1 (ENSSGRG00000049741)	mbtps1 (ENSSGRG00000049755)	SLC38A8 (ENSSGRG00000049883)	necab2 (ENSSGRG00000049884)	ENSSGRG00000049887	ENSSGRG00000049901	ENSSGRG00000049902	ENSSGRG00000049903	calb2a (ENSSGRG00000049910)	got2a (ENSSGRG00000050028) ##22	ENSSGRG00000050246	chka (ENSSGRG00000050248)	kmt5b (ENSSGRG00000050250)	si:dkey-12e7.1 (ENSSGRG00000050252)	anpeplb (ENSSGRG00000050272)	arpin (ENSSGRG00000050717)	igf1ra (ENSSGRG00000050736)	ENSSGRG00000051544	ENSSGRG00000051549	ENSSGRG00000051552	cftr (ENSSGRG00000051555)	asz1 (ENSSGRG00000051560)	wnt2 (ENSSGRG00000051561)	bcl2l13 (ENSSGRG00000051563)	bida (ENSSGRG00000051564)
Cyprininae	ANCESTRAL SPECIES	47	ENSGT00940000155112.A.b	ENSGT00940000156672.o.a.d	ENSGT00940000153717.b.g.h	ENSGT00940000166017.d	ENSGT00950000183211.a.a.b.i	ENSGT00940000158257.b	ENSGT00510000047030.d.r	ENSGT00510000047791.i	ENSGT00940000157041.a.m.b	ENSGT00390000018637.d	ENSGT00490000043404.a	ENSGT00940000157764.e.b.c.a	ENSGT00950000183131.b.b.d	ENSGT00950000182991.A.a.c.b.e	ENSGT00950000183108.b.a.a.i.b.a	ENSGT00950000183082.a.i.b ##22	ENSGT00940000166578.b	ENSGT00950000182939.a.b.b.d	ENSGT00940000156431.e	ENSGT00390000013269.d	ENSGT00940000164605.f.a	ENSGT00530000064251.b	ENSGT00510000048902.b	ENSGT00940000156682.e.b.b	ENSGT00940000159268.s	ENSGT00530000063847.a.c	ENSGT00940000158293.s	ENSGT00940000158567.d	ENSGT00880000138051.a.d	ENSGT00940000159231.a	ENSGT00390000015552.k.a
Goldfish	MODERN SPECIES	2689												mbtps1 (ENSCARG00000061508)	necab2 (ENSCARG00000061877)	pnp6 (ENSCARG00000061914)	calb2a (ENSCARG00000061953)	got2a (ENSCARG00000061988) ##22	ENSCARG00000062175	ENSCARG00000062211	chka (ENSCARG00000062250)	kmt5b (ENSCARG00000062745)	si:dkey-12e7.1 (ENSCARG00000062755)	anpeplb (ENSCARG00000062761)	arpin (ENSCARG00000062798)	ENSCARG00000062806	igf1ra (ENSCARG00000063122)	synm (ENSCARG00000067452)	TTC23 (ENSCARG00000067458)	CTTNBP2 (ENSCARG00000067470)	cftr (ENSCARG00000067902)
Cyprininae_a	ANCESTRAL SPECIES	15	ENSGT00940000153717.b.g.g	ENSGT00940000166017.c	ENSGT00950000183211.a.a.b.j	ENSGT00940000158257.a	ENSGT00510000047030.d.r	ENSGT00510000047791.i	ENSGT00530000063853.a.b.c	ENSGT00940000157041.a.m.b	ENSGT00390000018637.d	ENSGT00490000043404.a	ENSGT00940000157764.e.b.c.a	ENSGT00950000183131.b.b.d	ENSGT00940000163228.gc.b	ENSGT00950000182991.A.a.c.b.e	ENSGT00950000183108.b.a.a.i.b.a	ENSGT00950000183082.a.i.b ##22	ENSGT00940000166578.b	ENSGT00950000182939.a.b.b.d	ENSGT00940000156431.e	ENSGT00390000013269.d	ENSGT00940000164605.f.a	ENSGT00530000064251.b	ENSGT00510000048902.b	ENSGT00940000156682.e.b.b	ENSGT00940000159268.s	ENSGT00530000063847.a.c	ENSGT00940000158293.s	ENSGT00940000158567.d	ENSGT00880000138051.a.d	ENSGT00940000159231.a	ENSGT00390000015552.k.a
Common carp reference	MODERN SPECIES	9	ctcf (ENSCCRG00000066478)	ripor1 (ENSCCRG00000023740)	ENSCCRG00000082581	pard6a (ENSCCRG00000066494)	ranbp10 (ENSCCRG00000023834)	nutf2 (ENSCCRG00000024609)	edc4 (ENSCCRG00000024660)	NRN1L (ENSCCRG00000045927)	pskh1 (ENSCCRG00000071401)	fan1 (ENSCCRG00000045085)	mbtps1 (ENSCCRG00000035589)	necab2 (ENSCCRG00000045731)	ENSCCRG00000080755	pnp6 (ENSCCRG00000080406)	calb2a (ENSCCRG00000008980)	got2a (ENSCCRG00000061168) ##22	ENSCCRG00000009247	chka (ENSCCRG00000059423)	kmt5b (ENSCCRG00000053480)	si:dkey-12e7.1 (ENSCCRG00000065622)	anpeplb (ENSCCRG00000027581)	arpin (ENSCCRG00000071497)	ENSCCRG00000076095	igf1ra (ENSCCRG00000025283)	synm (ENSCCRG00000027604)	TTC23 (ENSCCRG00000073584)	cftr (ENSCCRG00000048940)	asz1 (ENSCCRG00000056469)	wnt2 (ENSCCRG00000079435)	bida (ENSCCRG00000061096)	bcl2l13 (ENSCCRG00000057754)
Golden-line barbel	MODERN SPECIES	54	ripor1 (ENSSGRG00000018597)	ENSSGRG00000018598	pard6a (ENSSGRG00000018599)	ranbp10 (ENSSGRG00000018601)	nutf2 (ENSSGRG00000018786)	edc4 (ENSSGRG00000018789)	ENSSGRG00000019557	NRN1L (ENSSGRG00000019559)	fan1 (ENSSGRG00000019566)	mbtps1 (ENSSGRG00000019921)	SLC38A8 (ENSSGRG00000020164)	necab2 (ENSSGRG00000020165)	ENSSGRG00000020167	pnp6 (ENSSGRG00000020168)	calb2a (ENSSGRG00000020169)	got2a (ENSSGRG00000020217) ##22	si:dkey-12e7.4 (ENSSGRG00000020552)	chka (ENSSGRG00000020553)	kmt5b (ENSSGRG00000020653)	si:dkey-12e7.1 (ENSSGRG00000020654)	anpeplb (ENSSGRG00000020656)	arpin (ENSSGRG00000020706)	igf1ra (ENSSGRG00000020715)	ENSSGRG00000020974	synm (ENSSGRG00000020977)	CTTNBP2 (ENSSGRG00000020980)	cftr (ENSSGRG00000020982)	asz1 (ENSSGRG00000020984)	wnt2 (ENSSGRG00000020985)	bcl2l13 (ENSSGRG00000020986)	bida (ENSSGRG00000020987)
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	399															ENSGT00990000203752.a	ENSGT00950000183082.a.j.a ##22	ENSGT00940000158136.f	ENSGT00880000138014.a.l	ENSGT00390000008139.a	ENSGT00940000157918.t	ENSGT01080000257410.A.f.l.f	ENSGT01050000244841.A.a.b.qb.a.c	ENSGT00950000183065.A.i	ENSGT00940000154489.A.c.b	ENSGT00940000155047.bc.f.a	ENSGT00940000163854.b.b	ENSGT00390000017828.c	ENSGT00390000009048.a.a.g.c	ENSGT00940000158701.a.c	ENSGT00390000011891.g	ENSGT00940000158376.q
Cyprininae_a	ANCESTRAL SPECIES	128	ENSGT00940000153991.a.a.ab	ENSGT00940000162034.a	ENSGT00940000160883.b.a	ENSGT00940000165991.r	ENSGT00940000164592.d	ENSGT00940000153284.a.mc.a.a	ENSGT00940000153904.b.a	ENSGT00950000182963.b.b.o.a	ENSGT00390000005569.j	ENSGT00530000063624.B.d	ENSGT00940000157843.m	ENSGT00950000183118.A.c.b.a.b	ENSGT00510000050937.n.a.a	ENSGT00940000160940.m	ENSGT00990000203752.a	ENSGT00950000183082.a.j.a ##22	ENSGT00940000158136.f	ENSGT00880000138014.a.l	ENSGT00390000008139.a	ENSGT00940000157918.t	ENSGT01080000257410.A.f.l.f	ENSGT01050000244841.A.a.b.qb.a.c	ENSGT00950000183065.A.i	ENSGT00940000154489.A.c.b	ENSGT00940000155047.bc.f.a	ENSGT00940000163854.b.b	ENSGT00390000017828.c	ENSGT00390000009048.a.a.g.c	ENSGT00940000158701.a.c	ENSGT00390000011891.g	ENSGT00940000156677.j
Golden-line barbel	MODERN SPECIES	218	COL4A5 (ENSSGRG00000053876)	IRS4 (ENSSGRG00000053874)	gc2 (ENSSGRG00000053841)	rasl11a (ENSSGRG00000053834)	rasl11a (ENSSGRG00000053832)	ENSSGRG00000053830	arhgap36 (ENSSGRG00000053829)	ENSSGRG00000053827	rps4x (ENSSGRG00000053824)	cited1 (ENSSGRG00000053823)	hdac8 (ENSSGRG00000053809)	PHKA1 (ENSSGRG00000052735)	leap2 (ENSSGRG00000052695)	bmp15 (ENSSGRG00000052694)	ENSSGRG00000052693	got2b (ENSSGRG00000052456) ##22	slc38a7 (ENSSGRG00000052432)	slc38a7 (ENSSGRG00000052427)	si:ch211-122f10.4 (ENSSGRG00000052424)	ENSSGRG00000052394	tmem208 (ENSSGRG00000052393)	katnb1 (ENSSGRG00000052373)	SLCO3A1 (ENSSGRG00000052372)	gnrhr2 (ENSSGRG00000052324)	MYZAP (ENSSGRG00000052320)	ENSSGRG00000052316	tcf12 (ENSSGRG00000052202)	ENSSGRG00000052194	mtfmt (ENSSGRG00000052188)	PPIP5K1 (ENSSGRG00000051613)	MAP1A (ENSSGRG00000051581)
Common carp reference	MODERN SPECIES		ENSCCRG00000061144	ENSCCRG00000054488	ENSCCRG00000073908	ENSCCRG00000024928	gc2 (ENSCCRG00000042447)	rasl11a (ENSCCRG00000065657)	ENSCCRG00000065649	arhgap36 (ENSCCRG00000014502)	ENSCCRG00000063739	rps4x (ENSCCRG00000026927)	cited1 (ENSCCRG00000056658)	hdac8 (ENSCCRG00000026960)	PHKA1 (ENSCCRG00000049375)	leap2 (ENSCCRG00000032625)	bmp15 (ENSCCRG00000077691)	got2b (ENSCCRG00000065897) ##22	slc38a7 (ENSCCRG00000066966)	si:ch211-122f10.4 (ENSCCRG00000026805)	katnb1 (ENSCCRG00000059520)	ENSCCRG00000010955	gnrhr2 (ENSCCRG00000041602)	MYZAP (ENSCCRG00000020691)	ENSCCRG00000020687	tcf12 (ENSCCRG00000020670)	ENSCCRG00000061281	ENSCCRG00000059617	mtfmt (ENSCCRG00000020025)	PPIP5K1 (ENSCCRG00000019405)	MAP1A (ENSCCRG00000040224)	tp53bp1 (ENSCCRG00000019255)	tubgcp4 (ENSCCRG00000044230)
Goldfish	MODERN SPECIES	47	camk2d1 (ENSCARG00000029535)	ANK2 (ENSCARG00000020228)	NSMAF (ENSCARG00000017224)	ggh (ENSCARG00000017078)	ASPH (ENSCARG00000016773)	ENSCARG00000016751	sdcbp (ENSCARG00000016730)	ENSCARG00000016725	rps4x (ENSCARG00000016641)	cited1 (ENSCARG00000016627)	hdac8 (ENSCARG00000016264)	PHKA1 (ENSCARG00000015395)	leap2 (ENSCARG00000015338)	bmp15 (ENSCARG00000015333)	ENSCARG00000015321	got2b (ENSCARG00000014368) ##22	slc38a7 (ENSCARG00000014315)	si:ch211-122f10.4 (ENSCARG00000014301)	tmem208 (ENSCARG00000014294)	katnb1 (ENSCARG00000014248)	SLCO3A1 (ENSCARG00000014218)	gnrhr2 (ENSCARG00000014205)	MYZAP (ENSCARG00000014192)	CGNL1 (ENSCARG00000014179)	tcf12 (ENSCARG00000013676)	ENSCARG00000013615	mtfmt (ENSCARG00000013599)	PPIP5K1 (ENSCARG00000013418)	MAP1A (ENSCARG00000013378)	PCDH7 (ENSCARG00000013375)	ENSCARG00000013008
Cyprininae	ANCESTRAL SPECIES	35	ENSGT00940000153991.a.a.ab	ENSGT00940000162034.a	ENSGT00940000160883.b.a	ENSGT00940000165991.r	ENSGT00940000164592.d	ENSGT00940000153284.a.mc.a.a	ENSGT00940000153904.b.a	ENSGT00950000182963.b.b.o.a	ENSGT00390000005569.j	ENSGT00530000063624.B.d	ENSGT00940000157843.m	ENSGT00950000183118.A.c.b.a.b	ENSGT00510000050937.n.a.a	ENSGT00940000160940	ENSGT00990000203752.b	ENSGT00950000183082.a.j.b ##22	ENSGT00940000158136.e	ENSGT00880000138014.a.k	ENSGT00940000163301.c.a.a.a	ENSGT00390000008139.b	ENSGT00940000157918.s	ENSGT01080000257410.A.f.l.e	ENSGT01050000244841.A.a.b.qb.a.d	ENSGT00390000009995	ENSGT00950000183065.A.j	ENSGT00940000154489.A.c.a	ENSGT00940000155047.bc.f.b	ENSGT00940000163854.b.a	ENSGT00390000017828.d	ENSGT00390000009048.a.a.g.d	ENSGT00940000158701.a.d
Goldfish	MODERN SPECIES	25	col4a5 (ENSCARG00000010842)	ENSCARG00000010835	ENSCARG00000010828	gc2 (ENSCARG00000007103)	rasl11a (ENSCARG00000006869)	ENSCARG00000006719	arhgap36 (ENSCARG00000006670)	NHSL2 (ENSCARG00000006635)	rps4x (ENSCARG00000006557)	cited1 (ENSCARG00000006545)	hdac8 (ENSCARG00000006419)	PHKA1 (ENSCARG00000005978)	leap2 (ENSCARG00000005864)	bmp15 (ENSCARG00000005845)	ENSCARG00000005831	got2b (ENSCARG00000036480) ##22	slc38a7 (ENSCARG00000036393)	si:ch211-122f10.4 (ENSCARG00000036314)	si:dkey-286h2.3 (ENSCARG00000036297)	tmem208 (ENSCARG00000036285)	katnb1 (ENSCARG00000036235)	SLCO3A1 (ENSCARG00000036124)	ENSCARG00000036075	MYZAP (ENSCARG00000036008)	CGNL1 (ENSCARG00000035688)	tcf12 (ENSCARG00000035412)	ENSCARG00000035350	PPIP5K1 (ENSCARG00000035133)	MAP1A (ENSCARG00000035025)	ENSCARG00000035013	tp53bp1 (ENSCARG00000034962)
Cyprininae_a	ANCESTRAL SPECIES	55	ENSGT00940000157094.y.a	ENSGT00940000164076.a.a.a	ENSGT00940000162034.b	ENSGT00940000160883.b.b	ENSGT00940000165991.q	ENSGT00940000164592.c	ENSGT00940000153284.a.mc.a.b	ENSGT00940000153904.b.b	ENSGT00950000182963.b.b.o.b	ENSGT00390000005569.i	ENSGT00530000063624.B.c	ENSGT00950000183118.A.c.b.a.a	ENSGT00510000050937.n.a.b	ENSGT00940000160940.n	ENSGT00990000203752.b	ENSGT00950000183082.a.j.b ##22	ENSGT00940000158136.e	ENSGT00880000138014.a.k	ENSGT00940000163301.c.a.a.a	ENSGT00390000008139.b	ENSGT00940000157918.s	ENSGT01080000257410.A.f.l.e	ENSGT01050000244841.A.a.b.qb.a.d	ENSGT00390000009995	ENSGT00950000183065.A.j	ENSGT00940000154489.A.c.a	ENSGT00940000155047.bc.f.b	ENSGT00940000163854.b.a	ENSGT00390000017828.d	ENSGT00390000009048.a.a.g.d	ENSGT00940000158701.a.d
Common carp reference	MODERN SPECIES	6	ankrd46b (ENSCCRG00000019651)	ENSCCRG00000022165	ENSCCRG00000057269	ENSCCRG00000024939	gc2 (ENSCCRG00000022788)	rasl11a (ENSCCRG00000042439)	ENSCCRG00000078793	ENSCCRG00000016697	ENSCCRG00000066774	rps4x (ENSCCRG00000069181)	cited1 (ENSCCRG00000076818)	hdac8 (ENSCCRG00000053840)	PHKA1 (ENSCCRG00000027034)	leap2 (ENSCCRG00000049935)	bmp15 (ENSCCRG00000032632)	got2b (ENSCCRG00000075394) ##22	slc38a7 (ENSCCRG00000026852)	si:ch211-122f10.4 (ENSCCRG00000026853)	ENSCCRG00000026857	tmem208 (ENSCCRG00000026861)	katnb1 (ENSCCRG00000026881)	ENSCCRG00000026913	ENSCCRG00000051160	MYZAP (ENSCCRG00000051158)	ENSCCRG00000022482	tcf12 (ENSCCRG00000020680)	ENSCCRG00000065458	ENSCCRG00000059836	ENSCCRG00000068619	PPIP5K1 (ENSCCRG00000051335)	tp53bp1 (ENSCCRG00000052375)
Golden-line barbel	MODERN SPECIES	604	PAQR9 (ENSSGRG00000054193)	ENSSGRG00000054186	ENSSGRG00000054183	col4a5 (ENSSGRG00000054182)	ENSSGRG00000054181	ENSSGRG00000054180	rasl11a (ENSSGRG00000054179)	ENSSGRG00000054136	arhgap36 (ENSSGRG00000054128)	ENSSGRG00000054127	rps4x (ENSSGRG00000054125)	hdac8 (ENSSGRG00000054124)	leap2 (ENSSGRG00000054121)	bmp15 (ENSSGRG00000054120)	ENSSGRG00000054119	got2b (ENSSGRG00000054048) ##22	ENSSGRG00000054033	slc38a7 (ENSSGRG00000054030)	si:ch211-122f10.4 (ENSSGRG00000054028)	ENSSGRG00000054027	tmem208 (ENSSGRG00000054025)	katnb1 (ENSSGRG00000053833)
Clupeiformes	ANCESTRAL SPECIES	4	ENSGT00940000166017	ENSGT00950000183211.a.a.b	ENSGT00940000158257	ENSGT00940000165060	ENSGT00390000006585.g	ENSGT00510000047030.d	ENSGT00510000047791	ENSGT00530000063853.a.b.c	ENSGT00940000157041.a	ENSGT00490000043404	ENSGT00940000157764.e.b	ENSGT00950000183131.b.b	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000165046.b	ENSGT00940000166578	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00390000013269	ENSGT00940000164605.f	ENSGT00530000064251	ENSGT00510000048902.b	ENSGT00940000156682.e.b	ENSGT00390000015368.a.b	ENSGT00940000159268	ENSGT00530000063847.a	ENSGT00940000156291.f	ENSGT00940000157540.A
Denticle herring	MODERN SPECIES	8	ripor1 (ENSDCDG00000033360)	zgc:158868 (ENSDCDG00000033698)	pard6a (ENSDCDG00000033701)	ranbp10 (ENSDCDG00000033715)	tsnaxip1 (ENSDCDG00000033823)	thap11 (ENSDCDG00000033825)	nutf2 (ENSDCDG00000033826)	edc4 (ENSDCDG00000033880)	NRN1L (ENSDCDG00000034473)	pskh1 (ENSDCDG00000034475)	mbtps1 (ENSDCDG00000034498)	SLC38A8 (ENSDCDG00000034861)	necab2 (ENSDCDG00000034862)	pnp6 (ENSDCDG00000034868)	calb2a (ENSDCDG00000034871)	got2a (ENSDCDG00000034903) ##22	ENSDCDG00000035095	si:dkey-12e7.4 (ENSDCDG00000035099)	ENSDCDG00000035100	chka (ENSDCDG00000035111)	kmt5b (ENSDCDG00000035127)	si:dkey-12e7.1 (ENSDCDG00000035130)	anpeplb (ENSDCDG00000035145)	arpin (ENSDCDG00000035189)	ENSDCDG00000035192	igf1ra (ENSDCDG00000035269)	ENSDCDG00000035514	PGPEP1L (ENSDCDG00000035518)	synm (ENSDCDG00000035519)	TTC23 (ENSDCDG00000035522)	mef2aa (ENSDCDG00000035527)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	19	zgc:158868 (ENSCHAG00000014261)	pard6a (ENSCHAG00000014274)	ranbp10 (ENSCHAG00000014310)	tsnaxip1 (ENSCHAG00000014871)	thap11 (ENSCHAG00000014885)	nutf2 (ENSCHAG00000014888)	edc4 (ENSCHAG00000014930)	NRN1L (ENSCHAG00000016148)	pskh1 (ENSCHAG00000016159)	mbtps1 (ENSCHAG00000016251)	SLC38A8 (ENSCHAG00000018203)	necab2 (ENSCHAG00000018236)	hydin (ENSCHAG00000018295)	pnp6 (ENSCHAG00000018654)	calb2a (ENSCHAG00000018707)	got2a (ENSCHAG00000018929) ##22	ENSCHAG00000019719	si:dkey-12e7.4 (ENSCHAG00000019749)	ENSCHAG00000019774	chka (ENSCHAG00000019794)	kmt5b (ENSCHAG00000019873)	si:dkey-12e7.1 (ENSCHAG00000019909)	anpeplb (ENSCHAG00000019919)	arpin (ENSCHAG00000020065)	ENSCHAG00000020084	igf1ra (ENSCHAG00000020214)	ENSCHAG00000023889	synm (ENSCHAG00000023897)	TTC23 (ENSCHAG00000023903)	mef2aa (ENSCHAG00000023932)	MCTP2 (ENSCHAG00000023968)
Atlantic herring	MODERN SPECIES	12	SLC16A2 (ENSCHAG00000009228)	ENSCHAG00000009234	SEC24B (ENSCHAG00000009286)	hopx (ENSCHAG00000012041)	arl9 (ENSCHAG00000012068)	SRP72 (ENSCHAG00000012091)	ENSCHAG00000012533	ENSCHAG00000012634	ENSCHAG00000012741	slc39a13 (ENSCHAG00000012769)	ENSCHAG00000012909	ano5b (ENSCHAG00000014778)	cmtr2 (ENSCHAG00000014993)	calb2b (ENSCHAG00000015003)	ENSCHAG00000015030	ENSCHAG00000015061 ##22	ENSCHAG00000015831	ENSCHAG00000015860	ENSCHAG00000015901	GCNT3 (ENSCHAG00000015917)	slc38a7 (ENSCHAG00000015947)	si:ch211-122f10.4 (ENSCHAG00000016098)	ENSCHAG00000016167	E2F4 (ENSCHAG00000016206)	tmem208 (ENSCHAG00000016264)	nucb2a (ENSCHAG00000016288)	ENSCHAG00000016449	ENSCHAG00000016528	E2F4 (ENSCHAG00000016867)	ENSCHAG00000016909	nucb2a (ENSCHAG00000016986)
Euteleosteomorpha	ANCESTRAL SPECIES	1	ENSGT00940000166017	ENSGT00950000183211.a.a.b	ENSGT00940000158257	ENSGT00390000018598	ENSGT00940000165060	ENSGT00510000047030.d	ENSGT00510000047791	ENSGT00530000063853.a.b.c	ENSGT00940000157041.a	ENSGT00490000043404	ENSGT00940000157764.e.b	ENSGT00950000183131.b.b	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a.i.b	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000165046.b	ENSGT00940000166578	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00390000013269	ENSGT00940000164605	ENSGT00940000154876.b	ENSGT00530000064251	ENSGT00510000048902.b	ENSGT00940000156682.e.b	ENSGT00390000015368.a.b	ENSGT00940000159268	ENSGT00530000063847.a	ENSGT00940000156205.h
Acanthomorphata	ANCESTRAL SPECIES	18	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085	ENSGT00390000015359
Euacanthomorphacea	ANCESTRAL SPECIES	23	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085	ENSGT00390000015359
Pinecone sodierfish	MODERN SPECIES	17	ENSMMDG00005000274	CTCF (ENSMMDG00005000260)	nudt21 (ENSMMDG00005000245)	ogfod1 (ENSMMDG00005000205)	tradd (ENSMMDG00005000176)	gnao1b (ENSMMDG00005000121)	cog4 (ENSMMDG00005000097)	ENSMMDG00005000084	gfod2 (ENSMMDG00005014640)	thap11 (ENSMMDG00005014636)	nrn1lb (ENSMMDG00005014633)	SLC38A8 (ENSMMDG00005014630)	cmtr2 (ENSMMDG00005014624)	calb2b (ENSMMDG00005014582)	ENSMMDG00005014579	got2b (ENSMMDG00005013999) ##22	slc38a7 (ENSMMDG00005013987)	si:ch211-122f10.4 (ENSMMDG00005013980)	E2F4 (ENSMMDG00005013978)	ENSMMDG00005013976	kif7 (ENSMMDG00005013975)	rhcgl1 (ENSMMDG00005013963)	fes (ENSMMDG00005013844)	furina (ENSMMDG00005009916)	ENSMMDG00005009843	cd82a (ENSMMDG00005009840)	kmt5b (ENSMMDG00005009834)	pole3 (ENSMMDG00005009828)	rpl12 (ENSMMDG00005009806)	KCNG4 (ENSMMDG00005009798)	zgc:194679 (ENSMMDG00005009794)
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085	ENSGT00390000015359
Tiger tail seahorse	MODERN SPECIES	348	ENSHCOG00000004324	CTCF (ENSHCOG00000004341)	nudt21 (ENSHCOG00000004360)	ogfod1 (ENSHCOG00000004366)	tradd (ENSHCOG00000004372)	gnao1b (ENSHCOG00000004392)	cog4 (ENSHCOG00000004456)	ENSHCOG00000004490	gfod2 (ENSHCOG00000004503)	thap11 (ENSHCOG00000004511)	nrn1lb (ENSHCOG00000004517)	SLC38A8 (ENSHCOG00000004541)	cmtr2 (ENSHCOG00000004551)	calb2b (ENSHCOG00000004572)	ENSHCOG00000004593	got2b (ENSHCOG00000004611) ##22	slc38a7 (ENSHCOG00000004628)	si:ch211-122f10.4 (ENSHCOG00000004639)	ENSHCOG00000004699	furina (ENSHCOG00000004770)	fes (ENSHCOG00000004878)	rhcga (ENSHCOG00000004914)	ENSHCOG00000004925	kif7 (ENSHCOG00000005029)	ENSHCOG00000005044	uraha (ENSHCOG00000005053)	PDCD5 (ENSHCOG00000005059)	mvda (ENSHCOG00000005086)	cyba (ENSHCOG00000005096)
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00940000155112.A.d	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000155112.A.d	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085
Ballan wrasse	MODERN SPECIES	17	ENSLBEG00000024589	CTCF (ENSLBEG00000024534)	nudt21 (ENSLBEG00000024494)	ogfod1 (ENSLBEG00000024421)	tradd (ENSLBEG00000024379)	gnao1b (ENSLBEG00000024351)	cog4 (ENSLBEG00000024250)	ENSLBEG00000024168	gfod2 (ENSLBEG00000024139)	thap11 (ENSLBEG00000024121)	nrn1lb (ENSLBEG00000024113)	SLC38A8 (ENSLBEG00000024093)	cmtr2 (ENSLBEG00000024048)	calb2b (ENSLBEG00000023988)	ENSLBEG00000023943	got2b (ENSLBEG00000023906) ##22	slc38a7 (ENSLBEG00000023860)	si:ch211-122f10.4 (ENSLBEG00000023831)	E2F4 (ENSLBEG00000023814)	ENSLBEG00000023796	furina (ENSLBEG00000023742)	fes (ENSLBEG00000023709)	rhcgl1 (ENSLBEG00000023675)	ENSLBEG00000023658	ENSLBEG00000023637	cnep1r1 (ENSLBEG00000023620)	kif7 (ENSLBEG00000023550)	heatr3 (ENSLBEG00000023484)	tent4b (ENSLBEG00000023462)	ENSLBEG00000023439	adcy7 (ENSLBEG00000023387)
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000153717.b.h	ENSGT00940000155112.A.d	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085
Perciformes	ANCESTRAL SPECIES	15	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00390000009477.s	ENSGT00950000182957.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b
Lumpfish	MODERN SPECIES	18	ENSCLMG00005022336	vrk3 (ENSCLMG00005022337)	CTCF (ENSCLMG00005022339)	nudt21 (ENSCLMG00005022340)	ogfod1 (ENSCLMG00005022342)	tradd (ENSCLMG00005022360)	gnao1b (ENSCLMG00005022362)	cog4 (ENSCLMG00005022363)	ENSCLMG00005022365	gfod2 (ENSCLMG00005022366)	thap11 (ENSCLMG00005022367)	nrn1lb (ENSCLMG00005022368)	SLC38A8 (ENSCLMG00005022369)	cmtr2 (ENSCLMG00005022370)	calb2b (ENSCLMG00005022372)	got2b (ENSCLMG00005022384) ##22	ENSCLMG00005022473	slc38a7 (ENSCLMG00005022474)	si:ch211-122f10.4 (ENSCLMG00005022475)	ENSCLMG00005022476	GAS8 (ENSCLMG00005022479)	ENSCLMG00005022483	furina (ENSCLMG00005022490)	fes (ENSCLMG00005022697)	rhcga (ENSCLMG00005022707)	kif7 (ENSCLMG00005022711)	ENSCLMG00005022726	ENSCLMG00005022727	ENSCLMG00005000003	ENSCLMG00005000013	ENSCLMG00005000016
Stickleback	MODERN SPECIES	1	ENSGACG00000015863	CTCF (ENSGACG00000015865)	ENSGACG00000015868	nudt21 (ENSGACG00000015869)	ogfod1 (ENSGACG00000015871)	tradd (ENSGACG00000015872)	gnao1b (ENSGACG00000015873)	cog4 (ENSGACG00000015875)	ENSGACG00000015876	ENSGACG00000015877	gfod2 (ENSGACG00000015878)	thap11 (ENSGACG00000015879)	SLC38A8 (ENSGACG00000015880)	cmtr2 (ENSGACG00000015882)	calb2b (ENSGACG00000015883)	got2b (ENSGACG00000015885) ##22	slc38a7 (ENSGACG00000015895)	si:ch211-122f10.4 (ENSGACG00000015897)	GAS8 (ENSGACG00000015906)	ENSGACG00000015908	ENSGACG00000015909	furina (ENSGACG00000015911)	fes (ENSGACG00000015919)	rhcga (ENSGACG00000015923)	kif7 (ENSGACG00000015929)	ENSGACG00000015931	CLEC18A (ENSGACG00000015933)	ENSGACG00000015935	uraha (ENSGACG00000015936)	pdcd5 (ENSGACG00000015937)	mvda (ENSGACG00000015940)
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b
Channel bull blenny	MODERN SPECIES	17	ENSCGOG00000016752	CTCF (ENSCGOG00000016758)	nudt21 (ENSCGOG00000017055)	ogfod1 (ENSCGOG00000017113)	tradd (ENSCGOG00000017203)	gnao1b (ENSCGOG00000017214)	cog4 (ENSCGOG00000018074)	ENSCGOG00000018219	gfod2 (ENSCGOG00000018222)	thap11 (ENSCGOG00000018223)	nrn1lb (ENSCGOG00000018224)	SLC38A8 (ENSCGOG00000018226)	cmtr2 (ENSCGOG00000018228)	calb2b (ENSCGOG00000018230)	ENSCGOG00000018263	got2b (ENSCGOG00000018271) ##22	slc38a7 (ENSCGOG00000018687)	si:ch211-122f10.4 (ENSCGOG00000018700)	E2F4 (ENSCGOG00000018733)	ENSCGOG00000018736	ENSCGOG00000018737	furina (ENSCGOG00000018765)	fes (ENSCGOG00000019657)	rhcga (ENSCGOG00000019805)	kif7 (ENSCGOG00000019829)	ENSCGOG00000019996	ENSCGOG00000019997	ENSCGOG00000020018	ENSCGOG00000020020	uraha (ENSCGOG00000020023)	fut7 (ENSCGOG00000020027)
Pike perch	MODERN SPECIES	29	ENSSLUG00000023831	nudt21 (ENSSLUG00000023837)	ogfod1 (ENSSLUG00000023880)	tradd (ENSSLUG00000024044)	gnao1b (ENSSLUG00000024057)	cog4 (ENSSLUG00000024125)	ENSSLUG00000024244	ENSSLUG00000005274	ENSSLUG00000005302	gfod2 (ENSSLUG00000005313)	thap11 (ENSSLUG00000005322)	nrn1lb (ENSSLUG00000005329)	SLC38A8 (ENSSLUG00000005342)	cmtr2 (ENSSLUG00000005355)	calb2b (ENSSLUG00000005373)	got2b (ENSSLUG00000005435) ##22	ENSSLUG00000005904	slc38a7 (ENSSLUG00000005926)	si:ch211-122f10.4 (ENSSLUG00000005952)	E2F4 (ENSSLUG00000006008)	gas8 (ENSSLUG00000006018)	ENSSLUG00000006025	ENSSLUG00000006032	ENSSLUG00000006039	furina (ENSSLUG00000006271)	fes (ENSSLUG00000009992)	rhcgl1 (ENSSLUG00000010124)	ENSSLUG00000010287	kif7 (ENSSLUG00000010329)	ENSSLUG00000010505	ENSSLUG00000010513
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000153717.b.h	ENSGT00940000155112.A.d	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085
Gilthead seabream	MODERN SPECIES	18	vrk3 (ENSSAUG00010025784)	ENSSAUG00010025785	CTCF (ENSSAUG00010025788)	nudt21 (ENSSAUG00010025792)	ogfod1 (ENSSAUG00010025796)	TRADD (ENSSAUG00010025820)	gnao1b (ENSSAUG00010025822)	cog4 (ENSSAUG00010004259)	ENSSAUG00010005062	gfod2 (ENSSAUG00010005063)	thap11 (ENSSAUG00010005064)	nrn1lb (ENSSAUG00010005065)	SLC38A8 (ENSSAUG00010005067)	cmtr2 (ENSSAUG00010005070)	calb2b (ENSSAUG00010005072)	got2b (ENSSAUG00010005082) ##22	slc38a7 (ENSSAUG00010005766)	si:ch211-122f10.4 (ENSSAUG00010005776)	ENSSAUG00010005804	gas8 (ENSSAUG00010005807)	ENSSAUG00010005810	furina (ENSSAUG00010005849)	ENSSAUG00010007432	rhcgl1 (ENSSAUG00010007547)	kif7 (ENSSAUG00010007666)	ENSSAUG00010008242	ENSSAUG00010008246	CLEC18A (ENSSAUG00010008252)	ENSSAUG00010008253	uraha (ENSSAUG00010008254)	pdcd5 (ENSSAUG00010008257)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000153717.b.h	ENSGT00940000155112.A.d	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085
European seabass	MODERN SPECIES	18	ENSDLAG00005012032	ENSDLAG00005012028	ENSDLAG00005011879	ENSDLAG00005011893	ENSDLAG00005027316	ogfod1 (ENSDLAG00005011582)	ENSDLAG00005011540	ENSDLAG00005011343	ENSDLAG00005011326	gfod2 (ENSDLAG00005011323)	thap11 (ENSDLAG00005011320)	nrn1lb (ENSDLAG00005034341)	ENSDLAG00005011305	ENSDLAG00005011301	ENSDLAG00005011175	ENSDLAG00005011031 ##22	ENSDLAG00005011170	ENSDLAG00005010993	ENSDLAG00005010980	ENSDLAG00005010964	ENSDLAG00005010955	furina (ENSDLAG00005009024)	ENSDLAG00005008980	fes (ENSDLAG00005008487)	rhcga (ENSDLAG00005008312)	kif7 (ENSDLAG00005002502)	ENSDLAG00005002865	ENSDLAG00005008298	ENSDLAG00005008284	ENSDLAG00005028912	ENSDLAG00005031861
Large yellow croaker	MODERN SPECIES	480	ENSLCRG00005016973	ENSLCRG00005016976	ENSLCRG00005016978	nudt21 (ENSLCRG00005016982)	ogfod1 (ENSLCRG00005016989)	tradd (ENSLCRG00005017016)	gnao1b (ENSLCRG00005017018)	cog4 (ENSLCRG00005017048)	ENSLCRG00005017051	gfod2 (ENSLCRG00005017054)	thap11 (ENSLCRG00005017055)	nrn1lb (ENSLCRG00005017057)	SLC38A8 (ENSLCRG00005017060)	cmtr2 (ENSLCRG00005017063)	calb2b (ENSLCRG00005017066)	got2b (ENSLCRG00005017070) ##22	ENSLCRG00005017098	slc38a7 (ENSLCRG00005017099)	si:ch211-122f10.4 (ENSLCRG00005017100)	E2F4 (ENSLCRG00005017101)	GAS8 (ENSLCRG00005017102)	ENSLCRG00005017104	furina (ENSLCRG00005017118)	ENSLCRG00005018732	ENSLCRG00005018768	rhcgl1 (ENSLCRG00005018787)	kif7 (ENSLCRG00005019682)	ENSLCRG00005019712	ENSLCRG00005019714	CLEC18A (ENSLCRG00005019716)	ENSLCRG00005019718
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00940000172336	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085	ENSGT00390000015359
Fugu	MODERN SPECIES	4	rab27a (ENSTRUG00000017930)	vrk3 (ENSTRUG00000017935)	ENSTRUG00000017941	CTCF (ENSTRUG00000017943)	nudt21 (ENSTRUG00000017953)	ogfod1 (ENSTRUG00000017959)	tradd (ENSTRUG00000017973)	gnao1b (ENSTRUG00000017975)	cog4 (ENSTRUG00000017982)	gfod2 (ENSTRUG00000020639)	thap11 (ENSTRUG00000018000)	nrn1lb (ENSTRUG00000026325)	SLC38A8 (ENSTRUG00000018006)	cmtr2 (ENSTRUG00000018008)	calb2b (ENSTRUG00000018012)	got2b (ENSTRUG00000018018) ##22	ENSTRUG00000023951	slc38a7 (ENSTRUG00000024491)	si:ch211-122f10.4 (ENSTRUG00000018036)	ENSTRUG00000027458	ENSTRUG00000018043	ENSTRUG00000026131	ENSTRUG00000021994	ENSTRUG00000018050	furina (ENSTRUG00000018061)	ENSTRUG00000018073	rhcg2 (ENSTRUG00000018092)	kif7 (ENSTRUG00000018115)	ENSTRUG00000018139	ENSTRUG00000018145	ENSTRUG00000029263
Tetraodon	MODERN SPECIES	20	rab27a (ENSTNIG00000009317)	vrk3 (ENSTNIG00000009316)	ENSTNIG00000009315	CTCF (ENSTNIG00000009314)	ENSTNIG00000009313	nudt21 (ENSTNIG00000009312)	ogfod1 (ENSTNIG00000009311)	tradd (ENSTNIG00000009310)	gnao1b (ENSTNIG00000009309)	cog4 (ENSTNIG00000009308)	gfod2 (ENSTNIG00000009307)	thap11 (ENSTNIG00000009306)	SLC38A8 (ENSTNIG00000009305)	cmtr2 (ENSTNIG00000009304)	calb2b (ENSTNIG00000009303)	got2b (ENSTNIG00000009302) ##22	slc38a7 (ENSTNIG00000009301)	si:ch211-122f10.4 (ENSTNIG00000009300)	ENSTNIG00000000100	ENSTNIG00000009299	ENSTNIG00000009298	furina (ENSTNIG00000009297)	ENSTNIG00000009296	RHCG (ENSTNIG00000009295)	kif7 (ENSTNIG00000009294)	ENSTNIG00000009293	uraha (ENSTNIG00000000957)	pdcd5 (ENSTNIG00000009292)	mvda (ENSTNIG00000009291)	cyba (ENSTNIG00000009290)	tcf25 (ENSTNIG00000009289)
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00940000153717.b.h	ENSGT00940000155112.A.d	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Carangaria	ANCESTRAL SPECIES	11	ENSGT00940000153717.b.h	ENSGT00940000155112.A.d	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Carangaria_A	ANCESTRAL SPECIES	20	ENSGT00940000153717.b.h	ENSGT00940000155112.A.d	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Barramundi perch	MODERN SPECIES	107	ENSLCAG00010002115	ENSLCAG00010002134	CTCF (ENSLCAG00010002143)	nudt21 (ENSLCAG00010002158)	ogfod1 (ENSLCAG00010002200)	tradd (ENSLCAG00010002223)	gnao1b (ENSLCAG00010002227)	cog4 (ENSLCAG00010002242)	ENSLCAG00010002258	gfod2 (ENSLCAG00010002260)	thap11 (ENSLCAG00010002261)	nrn1lb (ENSLCAG00010002264)	SLC38A8 (ENSLCAG00010002266)	cmtr2 (ENSLCAG00010002270)	calb2b (ENSLCAG00010002271)	got2b (ENSLCAG00010002302) ##22	ENSLCAG00010002340	slc38a7 (ENSLCAG00010002343)	si:ch211-122f10.4 (ENSLCAG00010002350)	ENSLCAG00010002354	ENSLCAG00010002356	gas8 (ENSLCAG00010002360)	ENSLCAG00010002365	furina (ENSLCAG00010002462)	fes (ENSLCAG00010002898)	rhcgl1 (ENSLCAG00010003057)	kif7 (ENSLCAG00010003113)	ENSLCAG00010003125	ENSLCAG00010003130	CLEC18A (ENSLCAG00010003135)	ENSLCAG00010003138
Seriola	ANCESTRAL SPECIES	13	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b
Yellowtail amberjack	MODERN SPECIES	3255	vrk3 (ENSSLDG00000018212)	ENSSLDG00000018243	CTCF (ENSSLDG00000018280)	nudt21 (ENSSLDG00000018315)	ogfod1 (ENSSLDG00000018335)	tradd (ENSSLDG00000018365)	gnao1b (ENSSLDG00000018383)	cog4 (ENSSLDG00000018416)	ENSSLDG00000018478	gfod2 (ENSSLDG00000018486)	thap11 (ENSSLDG00000018491)	nrn1lb (ENSSLDG00000018499)	SLC38A8 (ENSSLDG00000018508)	cmtr2 (ENSSLDG00000018543)	calb2b (ENSSLDG00000018561)	got2b (ENSSLDG00000018610) ##22	ENSSLDG00000018652	slc38a7 (ENSSLDG00000018665)	si:ch211-122f10.4 (ENSSLDG00000018684)	E2F4 (ENSSLDG00000018748)	gas8 (ENSSLDG00000018766)	ENSSLDG00000018796	furina (ENSSLDG00000018863)	fes (ENSSLDG00000018961)	rhcga (ENSSLDG00000019055)	kif7 (ENSSLDG00000019100)	ENSSLDG00000019198	ENSSLDG00000019203	CLEC18A (ENSSLDG00000019219)	ENSSLDG00000019235	uraha (ENSSLDG00000019249)
Greater amberjack	MODERN SPECIES	1	vrk3 (ENSSDUG00000018860)	CTCF (ENSSDUG00000018894)	ENSSDUG00000018954	nudt21 (ENSSDUG00000019001)	ogfod1 (ENSSDUG00000019024)	tradd (ENSSDUG00000019043)	gnao1b (ENSSDUG00000019056)	cog4 (ENSSDUG00000019109)	ENSSDUG00000019197	gfod2 (ENSSDUG00000019208)	thap11 (ENSSDUG00000019217)	nrn1lb (ENSSDUG00000019229)	SLC38A8 (ENSSDUG00000019245)	cmtr2 (ENSSDUG00000019312)	calb2b (ENSSDUG00000019322)	got2b (ENSSDUG00000019351) ##22	ENSSDUG00000019388	slc38a7 (ENSSDUG00000019407)	si:ch211-122f10.4 (ENSSDUG00000019425)	E2F4 (ENSSDUG00000019461)	gas8 (ENSSDUG00000019477)	ENSSDUG00000019513	furina (ENSSDUG00000019557)	fes (ENSSDUG00000019609)	rhcga (ENSSDUG00000019666)	kif7 (ENSSDUG00000019685)	ENSSDUG00000019747	ENSSDUG00000019757	CLEC18A (ENSSDUG00000019779)	ENSSDUG00000019797	uraha (ENSSDUG00000019806)
Pleuronectoidei	ANCESTRAL SPECIES	10	ENSGT00940000156218	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b
Tongue sole	MODERN SPECIES	15	ZNF319 (ENSCSEG00000005935)	csnk2a2a (ENSCSEG00000005937)	MATCAP1 (ENSCSEG00000005951)	zgc:194679 (ENSCSEG00000005955)	ENSCSEG00000005956	ENSCSEG00000005959	GABARAPL2 (ENSCSEG00000005965)	ENSCSEG00000005986	rpl12 (ENSCSEG00000005988)	pole3 (ENSCSEG00000005992)	thap11 (ENSCSEG00000006003)	nrn1lb (ENSCSEG00000006005)	SLC38A8 (ENSCSEG00000006010)	cmtr2 (ENSCSEG00000006021)	CALB2 (ENSCSEG00000006025)	got2b (ENSCSEG00000006050) ##22	ENSCSEG00000006056	slc38a7 (ENSCSEG00000006062)	si:ch211-122f10.4 (ENSCSEG00000006075)	ENSCSEG00000006076	furina (ENSCSEG00000006093)	fes (ENSCSEG00000006107)	rhcga (ENSCSEG00000006120)	METTL21C (ENSCSEG00000006133)	mettl21e (ENSCSEG00000006143)	ENSCSEG00000006148	blzf1 (ENSCSEG00000006155)	trmt10c (ENSCSEG00000006163)	txnl4b (ENSCSEG00000006165)	mrpl16 (ENSCSEG00000006169)	ENSCSEG00000006187
Turbot	MODERN SPECIES	17	RAB27A (ENSSMAG00000000607)	vrk3 (ENSSMAG00000000611)	ENSSMAG00000000626	ENSSMAG00000000644	ENSSMAG00000000646	ogfod1 (ENSSMAG00000000654)	tradd (ENSSMAG00000032874)	gnao1b (ENSSMAG00000000671)	ENSSMAG00000000682	gfod2 (ENSSMAG00000000698)	thap11 (ENSSMAG00000000701)	nrn1lb (ENSSMAG00000031080)	ENSSMAG00000000706	ENSSMAG00000000712	ENSSMAG00000000717	ENSSMAG00000000731 ##22	ENSSMAG00000000745	ENSSMAG00000000749	ENSSMAG00000000782	ENSSMAG00000031011	ENSSMAG00000000790	ENSSMAG00000000809	furina (ENSSMAG00000000895)	fes (ENSSMAG00000000911)	rhcga (ENSSMAG00000000926)	kif7 (ENSSMAG00000000961)	ENSSMAG00000000973	ENSSMAG00000000988	ENSSMAG00000000992	ENSSMAG00000001025	ENSSMAG00000001038
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Zig-zag eel	MODERN SPECIES	17	ENSMAMG00000027059	rab27a (ENSMAMG00000020948)	vrk3 (ENSMAMG00000020944)	ENSMAMG00000020940	ENSMAMG00000020936	ENSMAMG00000020931	ogfod1 (ENSMAMG00000020925)	gnao1b (ENSMAMG00000020918)	ENSMAMG00000020900	gfod2 (ENSMAMG00000027667)	thap11 (ENSMAMG00000020893)	nrn1lb (ENSMAMG00000027812)	ENSMAMG00000020870	ENSMAMG00000025153	ENSMAMG00000020857	ENSMAMG00000020843 ##22	ENSMAMG00000026055	ENSMAMG00000020832	ENSMAMG00000020822	ENSMAMG00000020818	ENSMAMG00000020796	furina (ENSMAMG00000020774)	fes (ENSMAMG00000020766)	rhcga (ENSMAMG00000020753)	kif7 (ENSMAMG00000020726)	ENSMAMG00000028160	ENSMAMG00000020711	ENSMAMG00000020705	ENSMAMG00000020701	ENSMAMG00000020696	ENSMAMG00000020694
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203851	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b
Climbing perch	MODERN SPECIES	16	ENSATEG00000002304	ogfod1 (ENSATEG00000002298)	ENSATEG00000002285	ENSATEG00000027323	ENSATEG00000025268	gnao1b (ENSATEG00000002226)	cog4 (ENSATEG00000002154)	ENSATEG00000002141	gfod2 (ENSATEG00000002128)	thap11 (ENSATEG00000002112)	nrn1lb (ENSATEG00000030066)	ENSATEG00000002036	ENSATEG00000002030	ENSATEG00000001992	ENSATEG00000001962	ENSATEG00000001907 ##22	ENSATEG00000001898	ENSATEG00000001839	ENSATEG00000025879	ENSATEG00000001783	ENSATEG00000001689	ENSATEG00000001566	furina (ENSATEG00000001463)	fes (ENSATEG00000001453)	rhcga (ENSATEG00000001327)	kif7 (ENSATEG00000001313)	ENSATEG00000001305	ENSATEG00000001269	ENSATEG00000001265	ENSATEG00000001250	ENSATEG00000001217
Siamese fighting fish	MODERN SPECIES	14	ENSBSLG00000006006	ENSBSLG00000006003	nudt21 (ENSBSLG00000005985)	ogfod1 (ENSBSLG00000005944)	tradd (ENSBSLG00000005932)	gnao1b (ENSBSLG00000005897)	cog4 (ENSBSLG00000005478)	ENSBSLG00000005409	gfod2 (ENSBSLG00000005397)	thap11 (ENSBSLG00000005387)	nrn1lb (ENSBSLG00000005338)	SLC38A8 (ENSBSLG00000004974)	cmtr2 (ENSBSLG00000004908)	calb2b (ENSBSLG00000004804)	ENSBSLG00000004729	got2b (ENSBSLG00000004640) ##22	slc38a7 (ENSBSLG00000004612)	si:ch211-122f10.4 (ENSBSLG00000004610)	E2F4 (ENSBSLG00000004608)	gas8 (ENSBSLG00000004602)	furina (ENSBSLG00000004110)	ENSBSLG00000002573	rhcga (ENSBSLG00000001610)	ENSBSLG00000001529	kif7 (ENSBSLG00000001372)	ENSBSLG00000001230	CLEC18A (ENSBSLG00000001211)	ENSBSLG00000000933	uraha (ENSBSLG00000000931)	pdcd5 (ENSBSLG00000000929)	mvda (ENSBSLG00000000906)
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Aplocheiloidei	ANCESTRAL SPECIES	16	ENSGT00940000153717.b.h	ENSGT00940000156672.o.a.e	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b
Mangrove rivulus	MODERN SPECIES	5	ENSKMAG00000008649	ENSKMAG00000008686	nudt21 (ENSKMAG00000008705)	ogfod1 (ENSKMAG00000008739)	tradd (ENSKMAG00000008755)	gnao1b (ENSKMAG00000008786)	cog4 (ENSKMAG00000008823)	ENSKMAG00000008854	gfod2 (ENSKMAG00000008866)	thap11 (ENSKMAG00000008880)	nrn1lb (ENSKMAG00000008895)	SLC38A8 (ENSKMAG00000008914)	cmtr2 (ENSKMAG00000008968)	calb2b (ENSKMAG00000008994)	ENSKMAG00000009046	got2b (ENSKMAG00000009073) ##22	ENSKMAG00000009125	slc38a7 (ENSKMAG00000009152)	si:ch211-122f10.4 (ENSKMAG00000009172)	ENSKMAG00000009194	ENSKMAG00000009215	ENSKMAG00000009233	ENSKMAG00000009289	furina (ENSKMAG00000009339)	ENSKMAG00000009416	rhcgl1 (ENSKMAG00000009447)	kif7 (ENSKMAG00000009565)	ENSKMAG00000009602	CLEC18A (ENSKMAG00000009641)	ENSKMAG00000009678	uraha (ENSKMAG00000009690)
Turquoise killifish	MODERN SPECIES	1616	RPL13 (ENSNFUG00015019590)	ENSNFUG00015019593	ENSNFUG00015019600	gcshb (ENSNFUG00015019605)	KARS (ENSNFUG00015019614)	ENSNFUG00015019662	bola3 (ENSNFUG00015019766)	VAT1L (ENSNFUG00015019775)	CLEC3A (ENSNFUG00015019792)	USP47 (ENSNFUG00015019860)	dkk3a (ENSNFUG00015021128)	thap11 (ENSNFUG00015021135)	NRN1L (ENSNFUG00015021137)	CALB2B (ENSNFUG00015021153)	cmtr2 (ENSNFUG00015021295)	GOT2 (ENSNFUG00015021299) ##22	ENSNFUG00015021619	SLC38A7 (ENSNFUG00015021625)	si:ch211-122f10.4 (ENSNFUG00015000604)	ENSNFUG00015000625	ENSNFUG00015000644	ENSNFUG00015000688	furina (ENSNFUG00015000750)	ENSNFUG00015000806	fes (ENSNFUG00015000842)	rhcgl1 (ENSNFUG00015001042)	KIF7 (ENSNFUG00015001234)	ENSNFUG00015001331	ENSNFUG00015001340	ENSNFUG00015001345	Nfu_g_1_003968 (ENSNFUG00015001352)
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Poecilia	ANCESTRAL SPECIES	4	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b.d
NAME_6	ANCESTRAL SPECIES	5	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00940000155112.A.d	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b.d	ENSGT00940000153229.A.a.a.b.c
Sailfin molly	MODERN SPECIES	316	vrk3 (ENSPLAG00000016329)	ENSPLAG00000016350	CTCF (ENSPLAG00000016406)	nudt21 (ENSPLAG00000016420)	ogfod1 (ENSPLAG00000016431)	tradd (ENSPLAG00000016454)	ENSPLAG00000016463	gnao1b (ENSPLAG00000016478)	cog4 (ENSPLAG00000016540)	ENSPLAG00000016570	gfod2 (ENSPLAG00000016595)	thap11 (ENSPLAG00000016610)	SLC38A8 (ENSPLAG00000016645)	cmtr2 (ENSPLAG00000016653)	CALB2 (ENSPLAG00000016681)	got2b (ENSPLAG00000016701) ##22	slc38a7 (ENSPLAG00000016737)	si:ch211-122f10.4 (ENSPLAG00000016743)	E2F4 (ENSPLAG00000016756)	ENSPLAG00000016785	ENSPLAG00000016837	furina (ENSPLAG00000000384)
Amazon molly	MODERN SPECIES	285										gfod2 (ENSPFOG00000018289)	thap11 (ENSPFOG00000020599)	nrn1lb (ENSPFOG00000018288)	SLC38A8 (ENSPFOG00000018259)	cmtr2 (ENSPFOG00000018254)	calb2b (ENSPFOG00000018227)	got2b (ENSPFOG00000021855) ##22	slc38a7 (ENSPFOG00000018191)	si:ch211-122f10.4 (ENSPFOG00000018149)	E2F4 (ENSPFOG00000022062)	ENSPFOG00000018132	ENSPFOG00000018070	furina (ENSPFOG00000018020)	ENSPFOG00000017969	rhcga (ENSPFOG00000017943)	kif7 (ENSPFOG00000017895)	ENSPFOG00000017863	CLEC18A (ENSPFOG00000017840)	ENSPFOG00000017836	uraha (ENSPFOG00000017833)	uraha (ENSPFOG00000017832)	pdcd5 (ENSPFOG00000017831)
Guppy	MODERN SPECIES	185																got2b (ENSPREG00000014848) ##22	ENSPREG00000014879	slc38a7 (ENSPREG00000014895)
Platyfish	MODERN SPECIES	18	vrk3 (ENSXMAG00000014232)	ENSXMAG00000024523	CTCF (ENSXMAG00000014187)	nudt21 (ENSXMAG00000014172)	ogfod1 (ENSXMAG00000014150)	tradd (ENSXMAG00000014149)	gnao1b (ENSXMAG00000014106)	cog4 (ENSXMAG00000014085)	ENSXMAG00000023314	gfod2 (ENSXMAG00000023804)	thap11 (ENSXMAG00000019795)	nrn1lb (ENSXMAG00000022055)	SLC38A8 (ENSXMAG00000014067)	cmtr2 (ENSXMAG00000014066)	calb2b (ENSXMAG00000010503)	got2b (ENSXMAG00000010511) ##22	slc38a7 (ENSXMAG00000010524)	si:ch211-122f10.4 (ENSXMAG00000010542)	ENSXMAG00000021092	ENSXMAG00000028836	ENSXMAG00000010554	ENSXMAG00000010564	furina (ENSXMAG00000014039)	fes (ENSXMAG00000014011)	rhcga (ENSXMAG00000013993)	ENSXMAG00000030017	kif7 (ENSXMAG00000013974)	ENSXMAG00000002983	ENSXMAG00000002987	ENSXMAG00000026606	uraha (ENSXMAG00000029933)
NAME_4	ANCESTRAL SPECIES	53															ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00940000169012	ENSGT00390000009477.s	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b.d	ENSGT00970000193948	ENSGT00940000153229.A.a.a.b.c
Mummichog	MODERN SPECIES	545															calb2b (ENSFHEG00000005491)	got2b (ENSFHEG00000005458) ##22	ENSFHEG00000005430	slc38a7 (ENSFHEG00000005415)	si:ch211-122f10.4 (ENSFHEG00000005384)	ENSFHEG00000005357	ENSFHEG00000005337	ENSFHEG00000005321	furina (ENSFHEG00000005306)	ENSFHEG00000005249	rhcgl1 (ENSFHEG00000005129)	kif7 (ENSFHEG00000005083)	ENSFHEG00000004995
Sheepshead minnow	MODERN SPECIES	2002																got2b (ENSCVAG00000001811) ##22	slc38a7 (ENSCVAG00000001819)	si:ch211-122f10.4 (ENSCVAG00000001835)	ENSCVAG00000001841	ENSCVAG00000001844
Oryzias	ANCESTRAL SPECIES	13	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085
Javanese ricefish	MODERN SPECIES	17	rab27a (ENSOJAG00000023994)	ENSOJAG00000023995	ENSOJAG00000023997	CTCF (ENSOJAG00000023999)	nudt21 (ENSOJAG00000024001)	ogfod1 (ENSOJAG00000024002)	tradd (ENSOJAG00000024004)	gnao1b (ENSOJAG00000024006)	cog4 (ENSOJAG00000024007)	gfod2 (ENSOJAG00000024009)	thap11 (ENSOJAG00000024011)	nrn1lb (ENSOJAG00000024014)	SLC38A8 (ENSOJAG00000024020)	cmtr2 (ENSOJAG00000024022)	calb2b (ENSOJAG00000024025)	got2b (ENSOJAG00000024034) ##22	ENSOJAG00000024047	slc38a7 (ENSOJAG00000024048)	si:ch211-122f10.4 (ENSOJAG00000024049)	ENSOJAG00000024051	ENSOJAG00000024052	ENSOJAG00000024053	furina (ENSOJAG00000004109)	fes (ENSOJAG00000005660)	rhcgl1 (ENSOJAG00000006079)	kif7 (ENSOJAG00000007070)	ENSOJAG00000007208	CLEC18A (ENSOJAG00000007233)	uraha (ENSOJAG00000007300)	pdcd5 (ENSOJAG00000007316)	mvda (ENSOJAG00000007438)
Indian medaka	MODERN SPECIES	26	kif3a (ENSOMEG00000002318)	rab27a (ENSOMEG00000002326)	vrk3 (ENSOMEG00000002338)	CTCF (ENSOMEG00000002356)	nudt21 (ENSOMEG00000002368)	ogfod1 (ENSOMEG00000002382)	tradd (ENSOMEG00000002387)	gnao1b (ENSOMEG00000002395)	cog4 (ENSOMEG00000002411)	gfod2 (ENSOMEG00000002422)	thap11 (ENSOMEG00000000040)	SLC38A8 (ENSOMEG00000002438)	cmtr2 (ENSOMEG00000002443)	calb2b (ENSOMEG00000002517)	ENSOMEG00000002542	got2b (ENSOMEG00000000798) ##22	slc38a7 (ENSOMEG00000002579)	si:ch211-122f10.4 (ENSOMEG00000002591)	ENSOMEG00000002597	ENSOMEG00000002607	ENSOMEG00000002636	furina (ENSOMEG00000002674)	fes (ENSOMEG00000002720)	rhcgl1 (ENSOMEG00000002745)	ENSOMEG00000002752	kif7 (ENSOMEG00000002772)	ENSOMEG00000002785	CLEC18A (ENSOMEG00000002795)	uraha (ENSOMEG00000002800)	pdcd5 (ENSOMEG00000002804)	mvda (ENSOMEG00000002813)
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00940000156218	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085	ENSGT00390000015359
Japanese Medaka HdrR	MODERN SPECIES	17	rab27a (ENSORLG00000008731)	vrk3 (ENSORLG00000008746)	ENSORLG00000008751	CTCF (ENSORLG00000008771)	nudt21 (ENSORLG00000008789)	ogfod1 (ENSORLG00000008816)	tradd (ENSORLG00000008824)	gnao1b (ENSORLG00000008848)	cog4 (ENSORLG00000008886)	gfod2 (ENSORLG00000008899)	thap11 (ENSORLG00000008903)	nrn1lb (ENSORLG00000008906)	ENSORLG00000008917	cmtr2 (ENSORLG00000008928)	calb2b (ENSORLG00000008959)	got2b (ENSORLG00000008985) ##22	ENSORLG00000027397	slc38a7 (ENSORLG00000009011)	si:ch211-122f10.4 (ENSORLG00000009032)	ENSORLG00000009041	ENSORLG00000027801	ENSORLG00000027338	furina (ENSORLG00000009133)	fes (ENSORLG00000009210)	rhcga (ENSORLG00000009256)	kif7 (ENSORLG00000009302)	ENSORLG00000009318	CLEC18A (ENSORLG00000028024)	uraha (ENSORLG00000009326)	pdcd5 (ENSORLG00000009342)	mvda (ENSORLG00000009351)
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203752	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b
Pomacentridae	ANCESTRAL SPECIES	48	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00950000182957.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a
Pomacentridae_A	ANCESTRAL SPECIES	45	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00950000182957.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a
Amphiprion	ANCESTRAL SPECIES	238										ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203851	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a
Orange clownfish	MODERN SPECIES		tradd (ENSAPEG00000013337)	ogfod1 (ENSAPEG00000013362)	nudt21 (ENSAPEG00000013434)	CTCF (ENSAPEG00000013457)	ENSAPEG00000013511	vrk3 (ENSAPEG00000013526)	rab27a (ENSAPEG00000013548)	pigb (ENSAPEG00000013580)	ENSAPEG00000013683	gfod2 (ENSAPEG00000013736)	thap11 (ENSAPEG00000013752)	nrn1lb (ENSAPEG00000013762)	SLC38A8 (ENSAPEG00000013782)	cmtr2 (ENSAPEG00000013930)	calb2b (ENSAPEG00000013952)	got2b (ENSAPEG00000014014) ##22	ENSAPEG00000014050	slc38a7 (ENSAPEG00000014082)	si:ch211-122f10.4 (ENSAPEG00000014145)	ENSAPEG00000014161	ENSAPEG00000014173	furina (ENSAPEG00000014251)	fes (ENSAPEG00000014314)	rhcgl1 (ENSAPEG00000014432)	emc8 (ENSAPEG00000014469)	cox4i1 (ENSAPEG00000014489)	dusp22a (ENSAPEG00000014506)	irf8 (ENSAPEG00000014533)	foxf1 (ENSAPEG00000014549)	mthfsd (ENSAPEG00000014567)	DBNDD1 (ENSAPEG00000014651)
Clown anemonefish	MODERN SPECIES	3254																got2b (ENSAOCG00000003360) ##22	ENSAOCG00000003350	slc38a7 (ENSAOCG00000003341)	si:ch211-122f10.4 (ENSAOCG00000003327)	ENSAOCG00000003308	ENSAOCG00000003297	furina (ENSAOCG00000003273)	fes (ENSAOCG00000003243)	rhcgl1 (ENSAOCG00000003203)
Spiny chromis	MODERN SPECIES	667							gnao1b (ENSAPOG00000012328)	cog4 (ENSAPOG00000012294)	ENSAPOG00000012215	gfod2 (ENSAPOG00000012207)	thap11 (ENSAPOG00000012195)	nrn1lb (ENSAPOG00000012183)	SLC38A8 (ENSAPOG00000012176)	cmtr2 (ENSAPOG00000012087)	calb2b (ENSAPOG00000012074)	got2b (ENSAPOG00000012031) ##22	ENSAPOG00000011993	slc38a7 (ENSAPOG00000011968)	si:ch211-122f10.4 (ENSAPOG00000011914)	E2F4 (ENSAPOG00000011855)	ENSAPOG00000011774	furina (ENSAPOG00000011734)	fes (ENSAPOG00000011641)	rhcgl1 (ENSAPOG00000011621)
Bicolor damselfish	MODERN SPECIES	1158												nrn1lb (ENSSPAG00000009254)	SLC38A8 (ENSSPAG00000009279)	cmtr2 (ENSSPAG00000009337)	calb2b (ENSSPAG00000009347)	got2b (ENSSPAG00000009373) ##22	ENSSPAG00000009407	slc38a7 (ENSSPAG00000009419)	si:ch211-122f10.4 (ENSSPAG00000009445)	ENSSPAG00000009468	ENSSPAG00000009479	ENSSPAG00000009499	furina (ENSSPAG00000009514)	fes (ENSSPAG00000009555)	rhcga (ENSSPAG00000009572)
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000156252.pb.b	ENSGT00390000009477.s	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT01000000216057	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085	ENSGT00390000015359
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT01000000216057	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085	ENSGT00390000015359
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT01000000216057	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000169012	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085	ENSGT00390000015359
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00940000158111	ENSGT00940000153717.b.h	ENSGT00940000156672.o.b	ENSGT00390000015814.jc	ENSGT00390000002349	ENSGT00390000002016	ENSGT00940000155883.a.b.a.b	ENSGT00940000154065.a	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a ##22	ENSGT00990000203752	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.b	ENSGT00390000011085	ENSGT00390000015359
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	291															ENSMZEG00005000181	GOT2 (ENSMZEG00005000097) ##22	slc38a7 (ENSMZEG00005023782)	si:ch211-122f10.4 (ENSMZEG00005023780)	E2F4 (ENSMZEG00005023779)	ENSMZEG00005023778	furina (ENSMZEG00005023777)
Zebra mbuna	MODERN SPECIES	1091	ENSMZEG00005012522	def8 (ENSMZEG00005012548)	mc1r (ENSMZEG00005012573)	tcf25 (ENSMZEG00005012587)	cyba (ENSMZEG00005012611)	mvda (ENSMZEG00005012684)	pdcd5 (ENSMZEG00005012704)	uraha (ENSMZEG00005012713)	ENSMZEG00005012726	CLEC18A (ENSMZEG00005012744)	ENSMZEG00005012761	kif7 (ENSMZEG00005012777)	ENSMZEG00005012795	rhcgl1 (ENSMZEG00005012822)	fes (ENSMZEG00005012855)	got2b (ENSMZEG00005012893) ##22	ENSMZEG00005012916	slc38a7 (ENSMZEG00005012941)	si:ch211-122f10.4 (ENSMZEG00005012979)	cmtr2 (ENSMZEG00005012998)	SLC38A8 (ENSMZEG00005013014)	nrn1lb (ENSMZEG00005013020)	thap11 (ENSMZEG00005013030)	gfod2 (ENSMZEG00005013035)	ENSMZEG00005013047	cog4 (ENSMZEG00005013065)	gnao1b (ENSMZEG00005013095)	tradd (ENSMZEG00005013123)	ogfod1 (ENSMZEG00005013137)	nudt21 (ENSMZEG00005013153)	CTCF (ENSMZEG00005013162)
Eastern happy	MODERN SPECIES		vrk3 (ENSACLG00000004194)	ENSACLG00000004232	ENSACLG00000004249	CTCF (ENSACLG00000004312)	nudt21 (ENSACLG00000004389)	ogfod1 (ENSACLG00000004413)	tradd (ENSACLG00000004420)	gnao1b (ENSACLG00000004434)	cog4 (ENSACLG00000004490)	ENSACLG00000004590	thap11 (ENSACLG00000004605)	nrn1lb (ENSACLG00000004612)	SLC38A8 (ENSACLG00000004627)	cmtr2 (ENSACLG00000004652)	calb2b (ENSACLG00000004659)	got2b (ENSACLG00000004703) ##22	ENSACLG00000004746	slc38a7 (ENSACLG00000004764)	si:ch211-122f10.4 (ENSACLG00000004786)	E2F4 (ENSACLG00000004828)	ENSACLG00000004862	gas8 (ENSACLG00000004871)	ENSACLG00000005092	furina (ENSACLG00000005106)	fes (ENSACLG00000005169)	rhcgl1 (ENSACLG00000005207)	kif7 (ENSACLG00000005235)	ENSACLG00000005272	ENSACLG00000005278	CLEC18A (ENSACLG00000005290)	ENSACLG00000005889
P. nyererei	MODERN SPECIES	407	ENSPNYG00000014735	ENSPNYG00000014752	nudt21 (ENSPNYG00000014773)	ogfod1 (ENSPNYG00000014789)	tradd (ENSPNYG00000014808)	ENSPNYG00000014819	gnao1b (ENSPNYG00000014836)	cog4 (ENSPNYG00000014881)	ENSPNYG00000014949	gfod2 (ENSPNYG00000014972)	thap11 (ENSPNYG00000014982)	nrn1lb (ENSPNYG00000014995)	SLC38A8 (ENSPNYG00000015014)	cmtr2 (ENSPNYG00000015043)	calb2b (ENSPNYG00000015056)	got2b (ENSPNYG00000015092) ##22	ENSPNYG00000015131	slc38a7 (ENSPNYG00000015145)	si:ch211-122f10.4 (ENSPNYG00000015165)	ENSPNYG00000015189	ENSPNYG00000015208	furina (ENSPNYG00000015245)	fes (ENSPNYG00000015286)	rhcga (ENSPNYG00000015319)
Burton s mouthbrooder	MODERN SPECIES	278	vrk3 (ENSHBUG00000000440)	ENSHBUG00000000441	CTCF (ENSHBUG00000014979)	nudt21 (ENSHBUG00000015015)	ogfod1 (ENSHBUG00000015026)	tradd (ENSHBUG00000015037)	cog4 (ENSHBUG00000015113)	gnao1b (ENSHBUG00000015127)	ENSHBUG00000015147	thap11 (ENSHBUG00000015163)	nrn1lb (ENSHBUG00000015168)	SLC38A8 (ENSHBUG00000015188)	cmtr2 (ENSHBUG00000015196)	CALB2 (ENSHBUG00000015230)	ENSHBUG00000015260	got2b (ENSHBUG00000015286) ##22	slc38a7 (ENSHBUG00000015320)	si:ch211-122f10.4 (ENSHBUG00000015374)	E2F4 (ENSHBUG00000015389)	gas8 (ENSHBUG00000015405)	ENSHBUG00000015483	furina (ENSHBUG00000015603)	fes (ENSHBUG00000015619)	rhcgl1 (ENSHBUG00000015655)	ENSHBUG00000015678	kif7 (ENSHBUG00000015697)	ENSHBUG00000015708	CLEC18A (ENSHBUG00000015722)	ENSHBUG00000015739	uraha (ENSHBUG00000015750)	pdcd5 (ENSHBUG00000015775)
Lyretail cichlid	MODERN SPECIES	290	CTCF (ENSNBRG00000009340)	nudt21 (ENSNBRG00000009313)	ogfod1 (ENSNBRG00000009298)	tradd (ENSNBRG00000009289)	ENSNBRG00000009278	gnao1b (ENSNBRG00000009253)	cog4 (ENSNBRG00000009207)	nrn1lb (ENSNBRG00000009183)	ENSNBRG00000009172	gfod2 (ENSNBRG00000009154)	SLC38A8 (ENSNBRG00000009124)	thap11 (ENSNBRG00000009112)	cmtr2 (ENSNBRG00000009088)	calb2b (ENSNBRG00000009041)	ENSNBRG00000009002	got2b (ENSNBRG00000008971) ##22	slc38a7 (ENSNBRG00000008900)	si:ch211-122f10.4 (ENSNBRG00000008865)	ENSNBRG00000008846	ENSNBRG00000008783	ENSNBRG00000008760	fes (ENSNBRG00000008719)	rhcgl1 (ENSNBRG00000008676)	ENSNBRG00000008615	kif7 (ENSNBRG00000008500)	ENSNBRG00000008448	CLEC18A (ENSNBRG00000008398)	uraha (ENSNBRG00000008385)	pdcd5 (ENSNBRG00000008360)	mvda (ENSNBRG00000008322)	cyba (ENSNBRG00000008290)
Nile tilapia	MODERN SPECIES		vrk3 (ENSONIG00000005739)	ENSONIG00000005738	CTCF (ENSONIG00000005736)	nudt21 (ENSONIG00000005734)	ogfod1 (ENSONIG00000030993)	tradd (ENSONIG00000005732)	gnao1b (ENSONIG00000010197)	cog4 (ENSONIG00000005726)	ENSONIG00000031523	gfod2 (ENSONIG00000005724)	thap11 (ENSONIG00000021394)	nrn1lb (ENSONIG00000027516)	SLC38A8 (ENSONIG00000005720)	cmtr2 (ENSONIG00000005719)	calb2b (ENSONIG00000005717)	got2b (ENSONIG00000005716) ##22	slc38a7 (ENSONIG00000005715)	si:ch211-122f10.4 (ENSONIG00000005712)	ENSONIG00000005710	ENSONIG00000042681	ENSONIG00000030749	furina (ENSONIG00000005696)	fes (ENSONIG00000005687)	rhcgl1 (ENSONIG00000005681)	kif7 (ENSONIG00000005673)	ENSONIG00000037743	ENSONIG00000005671	CLEC18A (ENSONIG00000005669)	ENSONIG00000041611	uraha (ENSONIG00000030759)	pdcd5 (ENSONIG00000005662)
Midas cichlid	MODERN SPECIES	313	CTCF (ENSACIG00000002794)	nudt21 (ENSACIG00000002809)	ogfod1 (ENSACIG00000002832)	tradd (ENSACIG00000002920)	gnao1b (ENSACIG00000002935)	cog4 (ENSACIG00000002962)	ENSACIG00000003007	ENSACIG00000003010	cbsa (ENSACIG00000003025)	gfod2 (ENSACIG00000003054)	thap11 (ENSACIG00000003074)	nrn1lb (ENSACIG00000003081)	SLC38A8 (ENSACIG00000003101)	cmtr2 (ENSACIG00000003129)	CALB2 (ENSACIG00000003179)	got2b (ENSACIG00000003442) ##22	ENSACIG00000003475	slc38a7 (ENSACIG00000003488)	si:ch211-122f10.4 (ENSACIG00000003555)	ENSACIG00000003575	gas8 (ENSACIG00000003588)	ENSACIG00000003642	furina (ENSACIG00000003739)	fes (ENSACIG00000003777)	rhcgl1 (ENSACIG00000003936)	kif7 (ENSACIG00000003978)	ENSACIG00000004092	ENSACIG00000004098	CLEC18A (ENSACIG00000004121)	uraha (ENSACIG00000004168)	pdcd5 (ENSACIG00000004205)
Cod	MODERN SPECIES	5	ENSGMOG00000029426	ENSGMOG00000024494	ENSGMOG00000002806	ENSGMOG00000025933	ENSGMOG00000002872	ogfod1 (ENSGMOG00000002891)	ENSGMOG00000002941	gnao1b (ENSGMOG00000002957)	ENSGMOG00000002976	gfod2 (ENSGMOG00000031970)	thap11 (ENSGMOG00000022603)	nrn1lb (ENSGMOG00000025675)	ENSGMOG00000003106	ENSGMOG00000003051	ENSGMOG00000003058	ENSGMOG00000003080 ##22	ENSGMOG00000030996	ENSGMOG00000003135	ENSGMOG00000034773	ENSGMOG00000022221	ENSGMOG00000033959	furina (ENSGMOG00000000699)	fes (ENSGMOG00000000712)	rhcga (ENSGMOG00000000775)	kif7 (ENSGMOG00000009645)	ENSGMOG00000027253	ENSGMOG00000033280	ENSGMOG00000017502	ENSGMOG00000017455	ENSGMOG00000017449	ENSGMOG00000002943
Protacanthopterygii	ANCESTRAL SPECIES	2	ENSGT00940000156672.o.b	ENSGT00940000153717.b.h	ENSGT00940000158111	ENSGT00940000161131.b.a.b	ENSGT00940000174693	ENSGT00940000156501	ENSGT00390000003044	ENSGT00390000006585	ENSGT00530000063853.a.b.d	ENSGT00940000158494	ENSGT00940000157764.e.a	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b.m	ENSGT00950000183108.b.a.a.i.a	ENSGT00990000203851.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000156252.pb.b	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.a	ENSGT00390000011085.d.a	ENSGT00390000015359	ENSGT00390000002290
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	223	ENSGT00940000156672.o.a.i	ENSGT00940000153717.b.g.c	ENSGT00950000183211.a.a.b.l	ENSGT00940000158257.h	ENSGT00940000165060	ENSGT00510000047030.d.f.b	ENSGT00510000047791.l	ENSGT00530000063853.a.b.c.b	ENSGT00940000157041.a.p	ENSGT00490000043404.e	ENSGT00950000183131.b.b.f.a	ENSGT00940000163228.p.a	ENSGT00950000182991.A.a.c.b.n.a	ENSGT00950000183108.b.a.a.i.b.c	ENSGT00990000203851.a.b	ENSGT00950000183082.a.o.a ##22	ENSGT00940000166578.c	ENSGT00950000182939.a.b.b.a	ENSGT00940000156431.t.b	ENSGT00390000013269.a	ENSGT00940000164605	ENSGT00530000064251.d	ENSGT00940000156682.e.b.c.b	ENSGT00940000156682.e.b.d	ENSGT00390000015368.a.b	ENSGT00940000159268.u	ENSGT00940000156205.h.b.b.b	ENSGT00940000156291.f.f	ENSGT00940000157540.A.d	ENSGT00940000160583.i	ENSGT00950000183112.a.f
Huchen	MODERN SPECIES	478				pard6a (ENSHHUG00000034656)	ranbp10 (ENSHHUG00000034658)	tsnaxip1 (ENSHHUG00000034766)	nutf2 (ENSHHUG00000034783)	edc4 (ENSHHUG00000034788)	NRN1L (ENSHHUG00000034846)	pskh1 (ENSHHUG00000034848)	mbtps1 (ENSHHUG00000034876)	necab2 (ENSHHUG00000034978)	ENSHHUG00000034991	pnp6 (ENSHHUG00000035002)	calb2a (ENSHHUG00000035008)	got2a (ENSHHUG00000035076) ##22	ENSHHUG00000035116	chka (ENSHHUG00000035133)	kmt5b (ENSHHUG00000035189)	si:dkey-12e7.1 (ENSHHUG00000035197)	ENSHHUG00000035208	ENSHHUG00000035483
Salmoninae_a	ANCESTRAL SPECIES	1	ENSGT00940000156672.o.a.i	ENSGT00940000153717.b.g.c	ENSGT00950000183211.a.a.b.l	ENSGT00940000158257.h	ENSGT00940000165060	ENSGT00510000047030.d.f.b	ENSGT00510000047791.l	ENSGT00530000063853.a.b.c.b	ENSGT00940000157041.a.p	ENSGT00490000043404.e	ENSGT00950000183131.b.b.f.a	ENSGT00940000163228.p.a	ENSGT00950000182991.A.a.c.b.n.a	ENSGT00950000183108.b.a.a.i.b.c	ENSGT00990000203851.a.b	ENSGT00950000183082.a.o.a ##22	ENSGT00940000166578.c	ENSGT00950000182939.a.b.b.a	ENSGT00940000156431.t.b	ENSGT00390000013269.a	ENSGT00940000164605	ENSGT00530000064251.d	ENSGT00940000156682.e.b.c.b	ENSGT00940000156682.e.b.d	ENSGT00390000015368.a.b	ENSGT00940000159268.u	ENSGT00940000156205.h.b.b.b	ENSGT00940000156291.f.f	ENSGT00940000157540.A.d	ENSGT00940000160583.i	ENSGT00950000183112.a.f
Salmo	ANCESTRAL SPECIES	9	ENSGT00940000156672.o.a.i	ENSGT00940000153717.b.g.c	ENSGT00950000183211.a.a.b.l	ENSGT00940000158257.h	ENSGT00940000165060	ENSGT00510000047030.d.f.b	ENSGT00510000047791.l	ENSGT00530000063853.a.b.c.b	ENSGT00940000157041.a.p	ENSGT00490000043404.e	ENSGT00950000183131.b.b.f.a	ENSGT00940000163228.p.a	ENSGT00950000182991.A.a.c.b.n.a	ENSGT00950000183108.b.a.a.i.b.c	ENSGT00990000203851.a.b	ENSGT00950000183082.a.o.a ##22	ENSGT00940000166578.c	ENSGT00950000182939.a.b.b.a	ENSGT00940000156431.t.b	ENSGT00390000013269.a	ENSGT00940000154876.b.d.b	ENSGT00530000064251.c.b	ENSGT00940000156682.e.b.d	ENSGT00390000015368.a.b	ENSGT00940000159268.u	ENSGT00940000156205.h.b.b.b	ENSGT00940000156291.f.f	ENSGT00940000157540.A.d	ENSGT00940000160583.i	ENSGT00950000183112.a.f	ENSGT00940000174630.b
River trout	MODERN SPECIES	8	ctcf (ENSSTUG00000027473)	ripor1 (ENSSTUG00000027556)	pard6a (ENSSTUG00000029375)	ranbp10 (ENSSTUG00000029409)	tsnaxip1 (ENSSTUG00000030349)	nutf2 (ENSSTUG00000030389)	edc4 (ENSSTUG00000030426)	NRN1L (ENSSTUG00000032432)	ENSSTUG00000032438	pskh1 (ENSSTUG00000032458)	mbtps1 (ENSSTUG00000032576)	necab2 (ENSSTUG00000035332)	ENSSTUG00000035420	pnp6 (ENSSTUG00000035484)	calb2a (ENSSTUG00000035518)	got2a (ENSSTUG00000035733) ##22	ENSSTUG00000035785	chka (ENSSTUG00000035829)	kmt5b (ENSSTUG00000036413)	si:dkey-12e7.1 (ENSSTUG00000036437)	ENSSTUG00000036459	ENSSTUG00000037340	igf1ra (ENSSTUG00000037414)	ENSSTUG00000039568	synm (ENSSTUG00000039617)	mef2aa (ENSSTUG00000039625)	MCTP2 (ENSSTUG00000039702)	nr2f2 (ENSSTUG00000039751)	ENSSTUG00000039838	lysmd4 (ENSSTUG00000039846)	rgma (ENSSTUG00000039853)
Atlantic salmon	MODERN SPECIES	7	pard6a (ENSSSAG00000105605)	ranbp10 (ENSSSAG00000066340)	ENSSSAG00000116269	tsnaxip1 (ENSSSAG00000067156)	nutf2 (ENSSSAG00000067143)	edc4 (ENSSSAG00000066938)	NRN1L (ENSSSAG00000066920)	pskh1 (ENSSSAG00000066917)	mbtps1 (ENSSSAG00000064826)	ENSSSAG00000064746	necab2 (ENSSSAG00000064724)	hydin (ENSSSAG00000064503)	pnp6 (ENSSSAG00000064474)	CALB2 (ENSSSAG00000064464)	ENSSSAG00000064460	got2a (ENSSSAG00000064442) ##22	ENSSSAG00000103740	ENSSSAG00000108041	chka (ENSSSAG00000064222)	si:dkey-12e7.1 (ENSSSAG00000064200)	kmt5b (ENSSSAG00000064203)	ENSSSAG00000064149	arpin (ENSSSAG00000064130)	ENSSSAG00000102910	igf1ra (ENSSSAG00000054714)	ENSSSAG00000054470	synm (ENSSSAG00000054454)	mef2aa (ENSSSAG00000053681)	ENSSSAG00000053609	nr2f2 (ENSSSAG00000053520)	lysmd4 (ENSSSAG00000053504)
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000153717.b.g.c	ENSGT01010000229925	ENSGT00950000183211.a.a.b.l	ENSGT00940000158257.h	ENSGT00940000165060	ENSGT00510000047030.d.f.b	ENSGT00510000047791.l	ENSGT00530000063853.a.b.c.b	ENSGT00940000157041.a.p	ENSGT00490000043404.e	ENSGT00940000157764.e.b.b	ENSGT00950000183131.b.b.f.a	ENSGT00940000164078.a.a.d	ENSGT00950000182991.A.a.c.b.n.a	ENSGT00950000183108.b.a.a.i.b.c	ENSGT00950000183082.a.o.a ##22	ENSGT00940000166578.c	ENSGT00950000182939.a.b.b.a	ENSGT00940000156431.t.b	ENSGT00390000013269.a	ENSGT00940000164605	ENSGT00530000064251.d	ENSGT00940000156682.e.b.c.b	ENSGT00940000156682.e.b.d	ENSGT00390000015368.a.b	ENSGT00940000159268.u	ENSGT00940000156205.h.b.b.b	ENSGT00940000156205.h.b.a	ENSGT00940000156291.f.f	ENSGT00940000157540.A.d	ENSGT00940000160583.i
Rainbow trout	MODERN SPECIES		ENSOMYG00000017264	pard6a (ENSOMYG00000053141)	ENSOMYG00000059097	ranbp10 (ENSOMYG00000017316)	tsnaxip1 (ENSOMYG00000017544)	nutf2 (ENSOMYG00000017568)	edc4 (ENSOMYG00000017907)	NRN1L (ENSOMYG00000055011)	pskh1 (ENSOMYG00000021176)	mbtps1 (ENSOMYG00000021669)	ENSOMYG00000024891	necab2 (ENSOMYG00000024912)	ENSOMYG00000024924	pnp6 (ENSOMYG00000025601)	calb2a (ENSOMYG00000025712)	got2a (ENSOMYG00000025990) ##22	chka (ENSOMYG00000026923)	ENSOMYG00000054299	kmt5b (ENSOMYG00000027166)	si:dkey-12e7.1 (ENSOMYG00000027177)	anpeplb (ENSOMYG00000027357)	arpin (ENSOMYG00000027740)	ENSOMYG00000057238	igf1ra (ENSOMYG00000028616)	ENSOMYG00000053818	ENSOMYG00000030698	synm (ENSOMYG00000030720)	ENSOMYG00000049766	mef2aa (ENSOMYG00000030795)	ENSOMYG00000031063	ENSOMYG00000048101
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000156672.o.a.i	ENSGT00940000153717.b.g.c	ENSGT01010000229925	ENSGT00950000183211.a.a.b.l	ENSGT00940000158257.h	ENSGT00940000165060	ENSGT00510000047030.d.f.b	ENSGT00510000047791.l	ENSGT00530000063853.a.b.c.b	ENSGT00940000157041.a.p	ENSGT00490000043404.e	ENSGT00950000183131.b.b.f.a	ENSGT00940000164078.a.a.d	ENSGT00950000182991.A.a.c.b.n.a	ENSGT00950000183108.b.a.a.i.b.c	ENSGT00950000183082.a.o.a ##22	ENSGT00940000166578.c	ENSGT00950000182939.a.b.b.a	ENSGT00940000156431.t.b	ENSGT00390000013269.a	ENSGT00940000164605	ENSGT00530000064251.d	ENSGT00940000156682.e.b.c.b	ENSGT00940000156682.e.b.d	ENSGT00390000015368.a.b	ENSGT00940000159268.u	ENSGT00940000156205.h.b.b.b	ENSGT00940000156291.f.f	ENSGT00940000157540.A.d	ENSGT00940000160583.i	ENSGT00950000183112.a.f
Coho salmon	MODERN SPECIES	24	ctcf (ENSOKIG00005001291)	ripor1 (ENSOKIG00005001376)	ENSOKIG00005001599	pard6a (ENSOKIG00005001604)	ranbp10 (ENSOKIG00005001654)	tsnaxip1 (ENSOKIG00005001707)	nutf2 (ENSOKIG00005001722)	edc4 (ENSOKIG00005002249)	NRN1L (ENSOKIG00005003958)	pskh1 (ENSOKIG00005003963)	mbtps1 (ENSOKIG00005004281)	necab2 (ENSOKIG00005008420)	ENSOKIG00005008453	pnp6 (ENSOKIG00005008548)	calb2a (ENSOKIG00005008645)	got2a (ENSOKIG00005008793) ##22	ENSOKIG00005008930	chka (ENSOKIG00005008946)	kmt5b (ENSOKIG00005009249)	si:dkey-12e7.1 (ENSOKIG00005009275)	anpeplb (ENSOKIG00005009291)	igf1ra (ENSOKIG00005009694)	ENSOKIG00005016636	synm (ENSOKIG00005016656)	mef2aa (ENSOKIG00005016671)	MCTP2 (ENSOKIG00005016791)	nr2f2 (ENSOKIG00005017956)	ENSOKIG00005018030	lysmd4 (ENSOKIG00005018033)	ENSOKIG00005018038	rgma (ENSOKIG00005018042)
Chinook salmon	MODERN SPECIES	30	cfdp1 (ENSOTSG00005028991)	tmem170a (ENSOTSG00005028994)	ctcf (ENSOTSG00005028995)	ripor1 (ENSOTSG00005029018)	pard6a (ENSOTSG00005029026)	ranbp10 (ENSOTSG00005029032)	tsnaxip1 (ENSOTSG00005029406)	nutf2 (ENSOTSG00005029408)	edc4 (ENSOTSG00005029432)	NRN1L (ENSOTSG00005030811)	pskh1 (ENSOTSG00005030812)	mbtps1 (ENSOTSG00005030833)	necab2 (ENSOTSG00005035531)	pnp6 (ENSOTSG00005035545)	calb2a (ENSOTSG00005035548)	got2a (ENSOTSG00005035551) ##22	ENSOTSG00005035620	chka (ENSOTSG00005035634)	kmt5b (ENSOTSG00005035977)	si:dkey-12e7.1 (ENSOTSG00005035981)	anpeplb (ENSOTSG00005035989)	ENSOTSG00005036783	igf1ra (ENSOTSG00005036789)	ENSOTSG00005040196	synm (ENSOTSG00005040197)	mef2aa (ENSOTSG00005040199)	MCTP2 (ENSOTSG00005040234)	ENSOTSG00005041013	nr2f2 (ENSOTSG00005041014)	ENSOTSG00005041015	lysmd4 (ENSOTSG00005041016)
Salmoninae	ANCESTRAL SPECIES	18	ENSGT00940000155191.a.a	ENSGT00940000153717.b.g.d	ENSGT00940000166017	ENSGT00950000183211.a.a.b.k	ENSGT00940000158257.g	ENSGT00510000047030.d.f.a	ENSGT00510000047791.k	ENSGT00530000063853.a.b.c.a	ENSGT00940000157041.a.o	ENSGT00490000043404.f	ENSGT00940000157764.e.b	ENSGT00950000183131.b.b.f.b	ENSGT00940000163228.p.b	ENSGT00950000182991.A.a.c.b.n.b	ENSGT00950000183108.b.a.a.i.b.d	ENSGT00950000183082.a.o.b ##22	ENSGT00990000203851.a.a	ENSGT00940000165046.b	ENSGT00940000166578.d	ENSGT00950000182939.a.b.b.b	ENSGT00940000156431.t.a	ENSGT00390000013269.b	ENSGT00940000154876.b.d.a	ENSGT00530000064251.c.a	ENSGT00510000048902.b	ENSGT00940000156682.e.b.c.a	ENSGT00940000159268.v	ENSGT00530000063847.a	ENSGT00940000156205.h.b.b.a	ENSGT00940000156291.f.e	ENSGT00940000157540.A.c
Huchen	MODERN SPECIES	350													ENSHHUG00000046489	pnp6 (ENSHHUG00000046490)	calb2a (ENSHHUG00000046520)	got2a (ENSHHUG00000046523) ##22	ENSHHUG00000046559	si:dkey-12e7.4 (ENSHHUG00000046566)	chka (ENSHHUG00000046585)	kmt5b (ENSHHUG00000046641)	ANPEP (ENSHHUG00000046650)	arpin (ENSHHUG00000047055)	ENSHHUG00000047066	igf1ra (ENSHHUG00000047085)	synm (ENSHHUG00000047423)	TTC23 (ENSHHUG00000047427)	mef2aa (ENSHHUG00000047432)	ENSHHUG00000047528	ENSHHUG00000047529	nr2f2 (ENSHHUG00000047554)
Salmoninae_a	ANCESTRAL SPECIES	13	ENSGT00940000155191.a.a	ENSGT00940000153717.b.g.d	ENSGT00940000166017	ENSGT00950000183211.a.a.b.k	ENSGT00940000158257.g	ENSGT00510000047030.d.f.a	ENSGT00510000047791.k	ENSGT00530000063853.a.b.c.a	ENSGT00940000157041.a.o	ENSGT00490000043404.f	ENSGT00940000157764.e.b	ENSGT00950000183131.b.b.f.b	ENSGT00940000163228.p.b	ENSGT00950000182991.A.a.c.b.n.b	ENSGT00950000183108.b.a.a.i.b.d	ENSGT00950000183082.a.o.b ##22	ENSGT00990000203851.a.a	ENSGT00940000165046.b	ENSGT00940000166578.d	ENSGT00950000182939.a.b.b.b	ENSGT00940000156431.t.a	ENSGT00390000013269.b	ENSGT00940000154876.b.d.a	ENSGT00530000064251.c.a	ENSGT00510000048902.b	ENSGT00940000156682.e.b.c.a	ENSGT00940000159268.v	ENSGT00530000063847.a	ENSGT00940000156205.h.b.b.a	ENSGT00940000156291.f.e	ENSGT00940000157540.A.c
Salmo	ANCESTRAL SPECIES	36	ENSGT00940000155191.a.a	ENSGT00940000153717.b.g.d	ENSGT00940000166017	ENSGT00950000183211.a.a.b.k	ENSGT00940000158257.g	ENSGT00510000047030.d.f.a	ENSGT00510000047791.k	ENSGT00530000063853.a.b.c.a	ENSGT00940000157041.a.o	ENSGT00490000043404.f	ENSGT00940000157764.e.b	ENSGT00950000183131.b.b.f.b	ENSGT00940000163228.p.b	ENSGT00950000182991.A.a.c.b.n.b	ENSGT00950000183108.b.a.a.i.b.d	ENSGT00950000183082.a.o.b ##22	ENSGT00990000203851.a.a	ENSGT00940000165046.b	ENSGT00940000166578.d	ENSGT00950000182939.a.b.b.b	ENSGT00940000156431.t.a	ENSGT00390000013269.b	ENSGT00940000154876.b.d.a	ENSGT00530000064251.c.a	ENSGT00510000048902.b	ENSGT00940000156682.e.b.c.a	ENSGT00940000159268.v	ENSGT00530000063847.a	ENSGT00940000156205.h.b.b.a	ENSGT00940000156291.f.e	ENSGT00940000157540.A.c
Atlantic salmon	MODERN SPECIES	1	ripor1 (ENSSSAG00000065167)	ENSSSAG00000094597	zgc:158868 (ENSSSAG00000066320)	pard6a (ENSSSAG00000066326)	ranbp10 (ENSSSAG00000067194)	nutf2 (ENSSSAG00000066405)	edc4 (ENSSSAG00000066446)	NRN1L (ENSSSAG00000066887)	ENSSSAG00000100071	pskh1 (ENSSSAG00000066890)	mbtps1 (ENSSSAG00000066932)	ENSSSAG00000108078	necab2 (ENSSSAG00000038205)	pnp6 (ENSSSAG00000098676)	CALB2 (ENSSSAG00000039328)	AATM (ENSSSAG00000039519) ##22	ENSSSAG00000040490	si:dkey-12e7.4 (ENSSSAG00000040527)	ENSSSAG00000040566	chka (ENSSSAG00000113965)	kmt5b (ENSSSAG00000121104)	si:dkey-12e7.1 (ENSSSAG00000040960)	ENSSSAG00000041193	arpin (ENSSSAG00000096742)	ENSSSAG00000047216	igf1r (ENSSSAG00000047729)	synm (ENSSSAG00000070243)	ttc23 (ENSSSAG00000070247)	mef2a (ENSSSAG00000070254)	ENSSSAG00000097542	mctp2 (ENSSSAG00000070338)
River trout	MODERN SPECIES	37	ripor1 (ENSSTUG00000006522)	zgc:158868 (ENSSTUG00000006413)	pard6a (ENSSTUG00000006401)	ranbp10 (ENSSTUG00000006239)	nutf2 (ENSSTUG00000006178)	edc4 (ENSSTUG00000002347)	NRN1L (ENSSTUG00000001981)	pskh1 (ENSSTUG00000001961)	ENSSTUG00000001945	SLC38A8 (ENSSTUG00000001934)	necab2 (ENSSTUG00000001890)	ENSSTUG00000001804	pnp6 (ENSSTUG00000001781)	calb2a (ENSSTUG00000001539)	ENSSTUG00000001321	got2a (ENSSTUG00000001079) ##22	si:dkey-12e7.4 (ENSSTUG00000000823)	ENSSTUG00000049695	chka (ENSSTUG00000049675)	kmt5b (ENSSTUG00000049668)	si:dkey-12e7.1 (ENSSTUG00000049666)	ENSSTUG00000049442	arpin (ENSSTUG00000049421)	ENSSTUG00000049414	igf1ra (ENSSTUG00000046953)	synm (ENSSTUG00000046811)	TTC23 (ENSSTUG00000046800)	mef2aa (ENSSTUG00000046760)	ENSSTUG00000046546	nr2f2 (ENSSTUG00000046497)	ARRDC4 (ENSSTUG00000046484)
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00390000014725.r.b	ENSGT00940000155191.a.a	ENSGT00940000153717.b.g.d	ENSGT00940000166017	ENSGT00950000183211.a.a.b.k	ENSGT00940000158257.g	ENSGT00510000047030.d.f.a	ENSGT00510000047791.k	ENSGT00530000063853.a.b.c.a	ENSGT00940000157041.a.o	ENSGT00960000190557	ENSGT00940000157764.e.b.a	ENSGT00950000183131.b.b.f.b	ENSGT00950000182991.A.a.c.b.n.b	ENSGT00950000183108.b.a.a.i.b.d	ENSGT00950000183082.a.o.b ##22	ENSGT00940000165046.b	ENSGT00940000166578.d	ENSGT00950000182939.a.b.b.b	ENSGT00940000156431.t.a	ENSGT00390000013269.b	ENSGT00940000154876.b.d.a	ENSGT00530000064251.c.a	ENSGT00510000048902.b	ENSGT00940000156682.e.b.c.a	ENSGT00940000159268.v	ENSGT00530000063847.a	ENSGT00940000156205.h.b.b.a	ENSGT00940000156291.f.e	ENSGT00940000157540.A.c	ENSGT00940000160523
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00390000014725.r.b	ENSGT00940000155191.a.a	ENSGT00940000153717.b.g.d	ENSGT00940000166017	ENSGT00950000183211.a.a.b.k	ENSGT00940000158257.g	ENSGT00510000047030.d.f.a	ENSGT00510000047791.k	ENSGT00530000063853.a.b.c.a	ENSGT00940000157041.a.o	ENSGT00960000190557	ENSGT00940000157764.e.b.a	ENSGT00950000183131.b.b.f.b	ENSGT00950000182991.A.a.c.b.n.b	ENSGT00950000183108.b.a.a.i.b.d	ENSGT00950000183082.a.o.b ##22	ENSGT00940000165046.b	ENSGT00940000166578.d	ENSGT00950000182939.a.b.b.b	ENSGT00940000156431.t.a	ENSGT00390000013269.b	ENSGT00940000154876.b.d.a	ENSGT00530000064251.c.a	ENSGT00510000048902.b	ENSGT00940000156682.e.b.c.a	ENSGT00940000159268.v	ENSGT00530000063847.a	ENSGT00940000156205.h.b.b.a	ENSGT00940000156291.f.e	ENSGT00940000157540.A.c	ENSGT00940000160523
Chinook salmon	MODERN SPECIES	10	TRAPPC14 (ENSOTSG00005015353)	zgc:152891 (ENSOTSG00005015373)	ripor1 (ENSOTSG00005015407)	zgc:158868 (ENSOTSG00005015518)	pard6a (ENSOTSG00005015520)	ranbp10 (ENSOTSG00005015527)	nutf2 (ENSOTSG00005015713)	edc4 (ENSOTSG00005015729)	NRN1L (ENSOTSG00005020164)	pskh1 (ENSOTSG00005020165)	ENSOTSG00005020166	SLC38A8 (ENSOTSG00005020168)	necab2 (ENSOTSG00005020169)	pnp6 (ENSOTSG00005020172)	calb2a (ENSOTSG00005020176)	got2a (ENSOTSG00005020287) ##22	si:dkey-12e7.4 (ENSOTSG00005021326)	ENSOTSG00005021328	chka (ENSOTSG00005021332)	kmt5b (ENSOTSG00005021734)	si:dkey-12e7.1 (ENSOTSG00005001707)	ENSOTSG00005002312	arpin (ENSOTSG00005011439)	ENSOTSG00005011440	igf1ra (ENSOTSG00005011441)	synm (ENSOTSG00005011468)	TTC23 (ENSOTSG00005011469)	mef2aa (ENSOTSG00005011472)	ENSOTSG00005011477	ENSOTSG00005011478	nr2f2 (ENSOTSG00005011480)
Coho salmon	MODERN SPECIES	14	TRAPPC14 (ENSOKIG00005031409)	zgc:152891 (ENSOKIG00005031530)	ENSOKIG00005031784	ripor1 (ENSOKIG00005031805)	zgc:158868 (ENSOKIG00005032039)	pard6a (ENSOKIG00005032051)	ranbp10 (ENSOKIG00005032141)	nutf2 (ENSOKIG00005032838)	edc4 (ENSOKIG00005032993)	NRN1L (ENSOKIG00005035603)	pskh1 (ENSOKIG00005035611)	SLC38A8 (ENSOKIG00005035822)	necab2 (ENSOKIG00005035870)	pnp6 (ENSOKIG00005035976)	calb2a (ENSOKIG00005035992)	got2a (ENSOKIG00005036098) ##22	si:dkey-12e7.4 (ENSOKIG00005036790)	ENSOKIG00005036802	chka (ENSOKIG00005036828)	kmt5b (ENSOKIG00005037177)	ENSOKIG00005037190	ENSOKIG00005037221	arpin (ENSOKIG00005037338)	ENSOKIG00005037381	igf1ra (ENSOKIG00005037663)	synm (ENSOKIG00005040808)	TTC23 (ENSOKIG00005040823)	mef2aa (ENSOKIG00005040853)	ENSOKIG00005041034	nr2f2 (ENSOKIG00005041302)	ARRDC4 (ENSOKIG00005041412)
Rainbow trout	MODERN SPECIES	11	ripor1 (ENSOMYG00000000974)	ENSOMYG00000066665	zgc:158868 (ENSOMYG00000001045)	pard6a (ENSOMYG00000001064)	ranbp10 (ENSOMYG00000001393)	nutf2 (ENSOMYG00000001598)	ENSOMYG00000074585	edc4 (ENSOMYG00000003102)	NRN1L (ENSOMYG00000005749)	pskh1 (ENSOMYG00000005780)	ENSOMYG00000054405	ENSOMYG00000005813	necab2 (ENSOMYG00000005880)	pnp6 (ENSOMYG00000005928)	calb2a (ENSOMYG00000006029)	got2a (ENSOMYG00000006495) ##22	si:dkey-12e7.4 (ENSOMYG00000006851)	chka (ENSOMYG00000007266)	kmt5b (ENSOMYG00000007624)	ENSOMYG00000064184	ENSOMYG00000009082	arpin (ENSOMYG00000012848)	ENSOMYG00000012853	igf1ra (ENSOMYG00000013731)	synm (ENSOMYG00000023468)	TTC23 (ENSOMYG00000023481)	mef2aa (ENSOMYG00000023562)	ENSOMYG00000068001	ENSOMYG00000023739	ENSOMYG00000061014	nr2f2 (ENSOMYG00000023839)
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	67	ENSGT00940000174693	ENSGT00940000156501.e.b	ENSGT00940000158494.l	ENSGT00940000157764.e.a	ENSGT00940000161773.a.a	ENSGT00950000182991.A.a.c.b.m.b.a	ENSGT00940000161773.b	ENSGT00950000183108.b.a.a.i.a.e	ENSGT00950000183082.a.p.b ##22	ENSGT00940000158136.j	ENSGT00880000138014.a.i	ENSGT00940000156252.pb.b.b	ENSGT00990000203851.b	ENSGT00940000161773.a.b	ENSGT00950000183108.b.a.a.i.a.f	ENSGT00950000183082.a.p.a ##22	ENSGT00940000158136.i	ENSGT00880000138014.a.j	ENSGT00940000156252.pb.b.a	ENSGT00940000163301.c.a.a.a.h	ENSGT00950000182957.a.a.b.tb.b.b	ENSGT00940000157220.a.g	ENSGT00940000158881.o	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000159749.e	ENSGT00940000165218.a.b	ENSGT00900000141128.g.b	ENSGT00940000168437.a	ENSGT00940000153229.A.a.a.a.o.a	ENSGT00390000011085.d.b	ENSGT00390000015359.d.a
Huchen	DUPLICATION
Huchen	MODERN SPECIES	134	CTCF (ENSHHUG00000021469)	RIPOR1 (ENSHHUG00000021394)	vrk3 (ENSHHUG00000021356)	ENSHHUG00000021349	gfod2 (ENSHHUG00000021343)	ENSHHUG00000021338	ENSHHUG00000021318	thap11 (ENSHHUG00000021315)	nrn1lb (ENSHHUG00000021304)	dnaaf1 (ENSHHUG00000021282)	SLC38A8 (ENSHHUG00000021231)	cmtr2 (ENSHHUG00000021228)	ENSHHUG00000021214	CALB2 (ENSHHUG00000021201)	ENSHHUG00000021184	got2b (ENSHHUG00000020997) ##22	slc38a7 (ENSHHUG00000020978)	si:ch211-122f10.4 (ENSHHUG00000020969)	E2F4 (ENSHHUG00000020958)	ENSHHUG00000020957	ENSHHUG00000020942	ENSHHUG00000020938	ENSHHUG00000020895	ENSHHUG00000020890	furina (ENSHHUG00000020820)	fes (ENSHHUG00000020551)	RHCG (ENSHHUG00000020275)	ENSHHUG00000020264	kif7 (ENSHHUG00000020259)	ENSHHUG00000020256	ENSHHUG00000020254
Huchen	MODERN SPECIES	2123														CALB2 (ENSHHUG00000024552)	ENSHHUG00000024547	got2b (ENSHHUG00000024523) ##22	slc38a7 (ENSHHUG00000024501)	si:ch211-122f10.4 (ENSHHUG00000024484)	ENSHHUG00000024480	ENSHHUG00000024465	ENSHHUG00000024449	ENSHHUG00000024435	ENSHHUG00000024433	furina (ENSHHUG00000024257)
Salmoninae_a	ANCESTRAL SPECIES	72	ENSGT00940000155112.A.d.b	ENSGT00940000156672.o.b.a	ENSGT00940000153717.b.h.a	ENSGT00940000158111.g	ENSGT00940000161131.b.a.b.a	ENSGT00940000174693	ENSGT00940000156501.e.b	ENSGT00390000003044.d	ENSGT00390000006585.c	ENSGT00530000063853.a.b.d.d	ENSGT00940000158494.l	ENSGT00940000157764.e.a	ENSGT00940000161773.a.a	ENSGT00950000182991.A.a.c.b.m.b.a	ENSGT00950000183108.b.a.a.i.a.e.b	ENSGT00950000183082.a.p.a ##22	ENSGT00940000158136.i	ENSGT00880000138014.a.j	ENSGT00950000182957.a.a.b.tb.b.b	ENSGT00940000157220.a.g	ENSGT00940000158881.o	ENSGT00950000182844.b.b.b.a.a.f	ENSGT00940000159749.e	ENSGT01010000223406.A	ENSGT00940000165218.a.b	ENSGT00900000141128.g.b	ENSGT00940000168437.a	ENSGT00940000153229.A.a.a.a.o.a	ENSGT00390000011085.d.b	ENSGT00390000015359.d.a	ENSGT00390000002290
Salmo	ANCESTRAL SPECIES	27	ENSGT00940000175365	ENSGT00940000155112.A.d.b	ENSGT00940000156672.o.b.a	ENSGT00940000153717.b.h.a	ENSGT00940000158111.g	ENSGT00940000174693	ENSGT00940000156501.e.b	ENSGT00390000003044.d	ENSGT00390000006585.c	ENSGT00530000063853.a.b.d.d	ENSGT00940000158494.l	ENSGT00940000157764.e.a	ENSGT00940000161773.a.a	ENSGT00950000182991.A.a.c.b.m.b.a	ENSGT00950000183108.b.a.a.i.a.e.b	ENSGT00950000183082.a.p.a ##22	ENSGT00940000158136.i	ENSGT00880000138014.a.j	ENSGT00940000156252.pb.b.a	ENSGT00940000156252.pb.b.b	ENSGT00940000163301.c.a.a.a.h	ENSGT00950000182957.a.b.s.a	ENSGT00940000157220.a.g	ENSGT00940000158881.o	ENSGT00950000182844.b.b.b.a.a.f	ENSGT00940000159749.e	ENSGT01010000223406.A	ENSGT00940000165218.a.b	ENSGT00900000141128.g.b	ENSGT00940000168437.a	ENSGT00940000153229.A.a.a.a.p
River trout	MODERN SPECIES	3	ENSSTUG00000050483	ENSSTUG00000050484	CTCF (ENSSTUG00000050486)	ENSSTUG00000050488	vrk3 (ENSSTUG00000050490)	ENSSTUG00000050494	gfod2 (ENSSTUG00000050496)	ENSSTUG00000050497	thap11 (ENSSTUG00000050500)	nrn1lb (ENSSTUG00000050503)	dnaaf1 (ENSSTUG00000050505)	SLC38A8 (ENSSTUG00000050509)	cmtr2 (ENSSTUG00000050516)	ENSSTUG00000050518	calb2b (ENSSTUG00000050525)	got2b (ENSSTUG00000050533) ##22	slc38a7 (ENSSTUG00000050541)	si:ch211-122f10.4 (ENSSTUG00000050544)	E2F4 (ENSSTUG00000050548)	ENSSTUG00000050549	furina (ENSSTUG00000050577)	fes (ENSSTUG00000050647)	RHCG (ENSSTUG00000050653)	kif7 (ENSSTUG00000019458)	ENSSTUG00000019465	ENSSTUG00000019473	ENSSTUG00000019492	ENSSTUG00000019515	ENSSTUG00000019520	pdcd5 (ENSSTUG00000019531)	mvda (ENSSTUG00000019621)
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000025098	ENSSSAG00000119732	ENSSSAG00000025312	ENSSSAG00000095207	ENSSSAG00000027004	vrk3 (ENSSSAG00000028164)	ENSSSAG00000117857	ENSSSAG00000028719	ENSSSAG00000028891	ENSSSAG00000029006	nrn1lb (ENSSSAG00000118447)	ENSSSAG00000029541	ENSSSAG00000029832	ENSSSAG00000029895	ENSSSAG00000030021	AATM (ENSSSAG00000030661) ##22	ENSSSAG00000039223	ENSSSAG00000039325	ENSSSAG00000039371	ENSSSAG00000042768	ENSSSAG00000039424	ENSSSAG00000082472	furina (ENSSSAG00000039603)	fes (ENSSSAG00000040885)	ENSSSAG00000039071	ENSSSAG00000105164	kif7 (ENSSSAG00000041141)	ENSSSAG00000043643	ENSSSAG00000043685	ENSSSAG00000041232	ENSSSAG00000049696
Oncorhynchus	ANCESTRAL SPECIES	32	ENSGT00940000175365	ENSGT00940000155112.A.d.b	ENSGT00940000156672.o.b.a	ENSGT00940000153717.b.h.a	ENSGT00940000158111.g	ENSGT00940000161131.b.a.b.a	ENSGT00940000156501.e.b	ENSGT00390000003044.d	ENSGT00390000006585.c.a	ENSGT00530000063853.a.b.d.d	ENSGT00940000158494.l	ENSGT00940000157764.e.a	ENSGT00940000161773.a.a	ENSGT00950000182991.A.a.c.b.m.a	ENSGT00950000183108.b.a.a.i.a.e.b	ENSGT00950000183082.a.p.a ##22	ENSGT00940000158136.i	ENSGT00880000138014.a.j.a	ENSGT00940000156252.pb.b.a	ENSGT00950000182957.a.a.b.tb.b.b	ENSGT00940000157220.a.g	ENSGT00940000158881.o	ENSGT00950000182844.b.b.b.a.a.f	ENSGT00940000159749.e	ENSGT01010000223406.A	ENSGT00940000165218.a.a.b	ENSGT00900000141128.g.b	ENSGT00940000168437.a	ENSGT00940000153229.A.a.a.a.o.a	ENSGT00390000011085.d.b	ENSGT00390000015359.d.a
Rainbow trout	MODERN SPECIES	18	ENSOMYG00000047101	vrk3 (ENSOMYG00000047102)	ENSOMYG00000073713	ENSOMYG00000047108	gfod2 (ENSOMYG00000074829)	ENSOMYG00000062264	ENSOMYG00000047121	thap11 (ENSOMYG00000047126)	ENSOMYG00000047127	dnaaf1 (ENSOMYG00000047128)	ENSOMYG00000036446	ENSOMYG00000036452	ENSOMYG00000072918	ENSOMYG00000036461	ENSOMYG00000036527	ENSOMYG00000036659 ##22	ENSOMYG00000036779	ENSOMYG00000036799	ENSOMYG00000036813	ENSOMYG00000021174	furina (ENSOMYG00000036937)	ENSOMYG00000037510	fes (ENSOMYG00000037634)	ENSOMYG00000038324	kif7 (ENSOMYG00000039027)	ENSOMYG00000039049	ENSOMYG00000039083	ENSOMYG00000039179	ENSOMYG00000039204	ENSOMYG00000039210	ENSOMYG00000039255
Oncorhynchus_a	ANCESTRAL SPECIES	28	ENSGT00940000175365	ENSGT00940000155112.A.d.b	ENSGT00940000156672.o.b.a	ENSGT00940000153717.b.h.a	ENSGT00940000158111.g	ENSGT00940000161131.b.a.b.a	ENSGT00940000156501.e.b	ENSGT00390000003044.d	ENSGT00390000006585.c.a	ENSGT00530000063853.a.b.d.d	ENSGT00940000158494.l	ENSGT00940000157764.e.a	ENSGT00940000161773.a.a	ENSGT00950000182991.A.a.c.b.m.a	ENSGT00950000183108.b.a.a.i.a.e.b	ENSGT00950000183082.a.p.a ##22	ENSGT00940000158136.i	ENSGT00880000138014.a.j.a	ENSGT00940000156252.pb.b.a	ENSGT00950000182957.a.a.b.tb.b.b	ENSGT00940000157220.a.g	ENSGT00940000158881.o	ENSGT00950000182844.b.b.b.a.a.f	ENSGT00940000159749.e	ENSGT01010000223406.A	ENSGT00940000165218.a.a.b	ENSGT00900000141128.g.b	ENSGT00940000168437.a	ENSGT00940000153229.A.a.a.a.o.a	ENSGT00390000011085.d.b	ENSGT00390000015359.d.a
Chinook salmon	MODERN SPECIES	3	ogfod1 (ENSOTSG00005016758)	nudt21 (ENSOTSG00005016800)	ENSOTSG00005016801	ENSOTSG00005016803	ENSOTSG00005016805	vrk3 (ENSOTSG00005016806)	ENSOTSG00005016808	ENSOTSG00005016809	thap11 (ENSOTSG00005016810)	nrn1lb (ENSOTSG00005016811)	dnaaf1 (ENSOTSG00005016813)	ENSOTSG00005016814	cmtr2 (ENSOTSG00005016815)	ENSOTSG00005016816	calb2b (ENSOTSG00005016818)	got2b (ENSOTSG00005016821) ##22	slc38a7 (ENSOTSG00005016827)	si:ch211-122f10.4 (ENSOTSG00005016832)	E2F4 (ENSOTSG00005016835)	ENSOTSG00005016836	ENSOTSG00005016837	furina (ENSOTSG00005016838)	fes (ENSOTSG00005016874)	RHCG (ENSOTSG00005017521)	kif7 (ENSOTSG00005017614)	ENSOTSG00005017617	ENSOTSG00005017619	ENSOTSG00005017622	ENSOTSG00005017624	ENSOTSG00005017625	pdcd5 (ENSOTSG00005017627)
Coho salmon	MODERN SPECIES	28	ENSOKIG00005050631	CTCF (ENSOKIG00005050634)	ENSOKIG00005050639	vrk3 (ENSOKIG00005050652)	ENSOKIG00005050667	gfod2 (ENSOKIG00005050668)	ENSOKIG00005050672	thap11 (ENSOKIG00005001863)	ENSOKIG00005001875	dnaaf1 (ENSOKIG00005001892)	ENSOKIG00005001901	cmtr2 (ENSOKIG00005001909)	ENSOKIG00005001915	ENSOKIG00005001922	CALB2 (ENSOKIG00005001932)	ENSOKIG00005002229 ##22	SLC38A7 (ENSOKIG00005003175)	si:ch211-122f10.4 (ENSOKIG00005003183)	E2F4 (ENSOKIG00005003200)	ENSOKIG00005003208	ENSOKIG00005003211	ENSOKIG00005003222	ENSOKIG00005003232	furina (ENSOKIG00005003290)	fes (ENSOKIG00005003802)	RHCG (ENSOKIG00005003956)	kif7 (ENSOKIG00005004124)	ENSOKIG00005004152	ENSOKIG00005004171	ENSOKIG00005004366	ENSOKIG00005004417
Salmoninae	ANCESTRAL SPECIES	67	ENSGT00390000002349.a	ENSGT00390000015814.ic.a.d	ENSGT00940000175365	ENSGT00940000155112.A.d.b	ENSGT00940000156672.o.b.a	ENSGT00940000153717.b.h.a	ENSGT00940000158111.g	ENSGT00940000174693	ENSGT00940000156501.e.b	ENSGT00940000158494.l	ENSGT00940000157764.e.a	ENSGT00940000161773.a.a	ENSGT00950000182991.A.a.c.b.m.b.a	ENSGT00940000161773.b	ENSGT00950000183108.b.a.a.i.a.e	ENSGT00950000183082.a.p.b ##22	ENSGT00940000158136.j	ENSGT00880000138014.a.i	ENSGT00940000156252.pb.b.b	ENSGT00990000203851.b	ENSGT00940000161773.a.b	ENSGT00950000183108.b.a.a.i.a.f	ENSGT00950000183082.a.p.a ##22	ENSGT00940000158136.i	ENSGT00880000138014.a.j	ENSGT00940000156252.pb.b.a	ENSGT00940000163301.c.a.a.a.h	ENSGT00950000182957.a.a.b.tb.b.b	ENSGT00940000157220.a.g	ENSGT00940000158881.o	ENSGT00950000182844.b.b.b.a.a
Salmoninae_a	ANCESTRAL SPECIES	73	ENSGT00390000002349.b	ENSGT00390000015814.ic.a.c	ENSGT00940000155112.A.d.a	ENSGT00940000156672.o.b.b	ENSGT00940000153717.b.h.b	ENSGT00940000158111.h	ENSGT00940000154285.b.b.d	ENSGT00940000161131.b.a.b.b	ENSGT00940000156501.e.a	ENSGT00390000003044.c	ENSGT00390000006585.d	ENSGT00530000063853.a.b.d.c	ENSGT00940000158494.k	ENSGT00940000161773.b	ENSGT00950000183108.b.a.a.i.a.e.a	ENSGT00950000183082.a.p.b ##22	ENSGT00990000203851.b	ENSGT00940000158136.j	ENSGT00880000138014.a.i	ENSGT00940000156252.pb.b.b	ENSGT00940000163301.c.a.a.a.h	ENSGT00940000156252.pb.b.a	ENSGT00950000182957.a.b.s.a	ENSGT00950000182957.a.a.b.tb.b.a	ENSGT00940000157220.a.h	ENSGT00940000158881.p	ENSGT00950000182844.b.b.b.a.a.e	ENSGT01010000223406.B	ENSGT00940000159749.f	ENSGT00940000165218.a.a	ENSGT00900000141128.g.a
Salmo	ANCESTRAL SPECIES	30	ENSGT00390000002349.b	ENSGT00390000015814.ic.a.c	ENSGT00940000155112.A.d.a	ENSGT00940000156672.o.b.b	ENSGT00940000153717.b.h.b	ENSGT00940000158111.h	ENSGT00940000154285.b.b.d	ENSGT00940000161131.b.a.b.b	ENSGT00940000156501.e.a	ENSGT00390000003044.c	ENSGT00390000006585.d	ENSGT00530000063853.a.b.d.c	ENSGT00940000158494.k	ENSGT00940000161773.b	ENSGT00950000183108.b.a.a.i.a.e.a	ENSGT00950000183082.a.p.b ##22	ENSGT00940000158136.j	ENSGT00880000138014.a.i	ENSGT00950000182957.b.a.b.a.a.c	ENSGT00940000157220.a.h	ENSGT00940000158881.p	ENSGT00950000182844.b.b.b.a.a.e	ENSGT01010000223406.B	ENSGT00940000159749.f	ENSGT00940000165218.a.a	ENSGT00900000141128.g.a	ENSGT00940000168437.b	ENSGT00390000011085.d.a.b	ENSGT00390000015359.d.b	ENSGT00390000002290.i	ENSGT00390000005563.g
River trout	MODERN SPECIES	21	tradd (ENSSTUG00000036206)	ogfod1 (ENSSTUG00000036151)	nudt21 (ENSSTUG00000036133)	ENSSTUG00000036128	CTCF (ENSSTUG00000036022)	ENSSTUG00000035996	vrk3 (ENSSTUG00000035966)	ENSSTUG00000035936	gfod2 (ENSSTUG00000035908)	ENSSTUG00000035905	thap11 (ENSSTUG00000035898)	nrn1lb (ENSSTUG00000019811)	dnaaf1 (ENSSTUG00000019800)	cmtr2 (ENSSTUG00000019760)	CALB2 (ENSSTUG00000019733)	got2b (ENSSTUG00000019216) ##22	slc38a7 (ENSSTUG00000019171)	si:ch211-122f10.4 (ENSSTUG00000019147)	E2F4 (ENSSTUG00000019122)	ENSSTUG00000019053	ENSSTUG00000019027	furina (ENSSTUG00000018534)	fes (ENSSTUG00000017046)	RHCG (ENSSTUG00000016555)	ENSSTUG00000016534	kif7 (ENSSTUG00000016508)	ENSSTUG00000016492	ENSSTUG00000016473	ENSSTUG00000016463	pdcd5 (ENSSTUG00000016412)	mvda (ENSSTUG00000016354)
Atlantic salmon	MODERN SPECIES	18	ogfod1 (ENSSSAG00000081394)	ENSSSAG00000081402	ENSSSAG00000081405	ENSSSAG00000095664	ENSSSAG00000081410	vrk3 (ENSSSAG00000081412)	ENSSSAG00000121187	ENSSSAG00000081415	gfod2 (ENSSSAG00000103372)	ENSSSAG00000097699	tha11 (ENSSSAG00000008804)	ENSSSAG00000091872	dnaaf1 (ENSSSAG00000085687)	ENSSSAG00000083190	ENSSSAG00000008831	ENSSSAG00000008911 ##22	ENSSSAG00000009226	ENSSSAG00000106696	ENSSSAG00000009264	ENSSSAG00000009321	ENSSSAG00000009886	furina (ENSSSAG00000009946)	fes (ENSSSAG00000011616)	ENSSSAG00000041653	kif7 (ENSSSAG00000043622)	ENSSSAG00000041207	ENSSSAG00000043701	ENSSSAG00000041273	ENSSSAG00000041293	erg19 (ENSSSAG00000041375)	ENSSSAG00000108351
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00390000015814.ic.a.c	ENSGT00940000155112.A.d.a	ENSGT00940000156672.o.b.b	ENSGT00940000153717.b.h.b	ENSGT00940000158111.h	ENSGT00940000154285.b.b.d	ENSGT00940000161131.b.a.b.b	ENSGT00940000156501.e.a	ENSGT00390000006585.d	ENSGT00390000003044.c	ENSGT00390000006585.c.b	ENSGT00530000063853.a.b.d.c	ENSGT00940000158494.k	ENSGT00940000161773.b	ENSGT00950000183108.b.a.a.i.a.e.a	ENSGT00950000183082.a.p.b ##22	ENSGT00990000203851.b	ENSGT00940000158136.j	ENSGT00880000138014.a.i	ENSGT00940000156252.pb.b.b	ENSGT00940000163301.c.a.a.a.h	ENSGT00950000182957.a.b.s.a	ENSGT00950000182957.a.a.b.tb.b.a	ENSGT00940000157220.a.h	ENSGT00940000158881.p	ENSGT00950000182844.b.b.b.a.a.e	ENSGT00940000159749.f	ENSGT01010000223406.B	ENSGT00940000165218.a.a.a	ENSGT00900000141128.g.a	ENSGT00940000168437.b.a
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00390000015814.ic.a.c	ENSGT00940000155112.A.d.a	ENSGT00940000156672.o.b.b	ENSGT00940000153717.b.h.b	ENSGT00940000158111.h	ENSGT00940000154285.b.b.d	ENSGT00940000161131.b.a.b.b	ENSGT00940000156501.e.a	ENSGT00390000006585.d	ENSGT00390000003044.c	ENSGT00390000006585.c.b	ENSGT00530000063853.a.b.d.c	ENSGT00940000158494.k	ENSGT00940000161773.b	ENSGT00950000183108.b.a.a.i.a.e.a	ENSGT00950000183082.a.p.b ##22	ENSGT00990000203851.b	ENSGT00940000158136.j	ENSGT00880000138014.a.i	ENSGT00940000156252.pb.b.b	ENSGT00940000163301.c.a.a.a.h	ENSGT00950000182957.a.b.s.a	ENSGT00950000182957.a.a.b.tb.b.a	ENSGT00940000157220.a.h	ENSGT00940000158881.p	ENSGT00950000182844.b.b.b.a.a.e	ENSGT00940000159749.f	ENSGT01010000223406.B	ENSGT00940000165218.a.a.a	ENSGT00900000141128.g.a	ENSGT00940000168437.b.a
Coho salmon	MODERN SPECIES	22	ENSOKIG00005019927	NUDT21 (ENSOKIG00005020011)	ENSOKIG00005020030	CTCF (ENSOKIG00005020058)	ENSOKIG00005020125	vrk3 (ENSOKIG00005020140)	ENSOKIG00005020184	ENSOKIG00005020196	gfod2 (ENSOKIG00005020224)	ENSOKIG00005020239	thap11 (ENSOKIG00005020249)	nrn1lb (ENSOKIG00005020254)	dnaaf1 (ENSOKIG00005020262)	CMTR2 (ENSOKIG00005020281)	CALB2 (ENSOKIG00005020337)	got2b (ENSOKIG00005020412) ##22	ENSOKIG00005020580	slc38a7 (ENSOKIG00005020592)	ENSOKIG00005020612	E2F4 (ENSOKIG00005020629)	ENSOKIG00005020643	ENSOKIG00005020924	furina (ENSOKIG00005020983)	fes (ENSOKIG00005021181)	ENSOKIG00005021645	RHCG (ENSOKIG00005021712)	kif7 (ENSOKIG00005022124)	ENSOKIG00005022156	ENSOKIG00005022173	ENSOKIG00005022182	ENSOKIG00005022212
Chinook salmon	MODERN SPECIES	28	rsl24d1 (ENSOTSG00005012383)	ENSOTSG00005012384	gnao1b (ENSOTSG00005012385)	ogfod1 (ENSOTSG00005012392)	nudt21 (ENSOTSG00005012393)	ENSOTSG00005012395	CTCF (ENSOTSG00005012404)	vrk3 (ENSOTSG00005012406)	ENSOTSG00005012407	ENSOTSG00005012408	gfod2 (ENSOTSG00005012409)	thap11 (ENSOTSG00005012411)	nrn1lb (ENSOTSG00005012412)	ENSOTSG00005012414	ENSOTSG00005012416	got2b (ENSOTSG00005012419) ##22	slc38a7 (ENSOTSG00005012792)	si:ch211-122f10.4 (ENSOTSG00005012794)	E2F4 (ENSOTSG00005012804)	ENSOTSG00005012806	ENSOTSG00005012817	ENSOTSG00005012819	ENSOTSG00005012820	ENSOTSG00005012821	ENSOTSG00005012822	mns1 (ENSOTSG00005012823)	tex9 (ENSOTSG00005012827)	RFX7 (ENSOTSG00005012828)	nedd4a (ENSOTSG00005012829)	PRTG (ENSOTSG00005013203)	pygo1 (ENSOTSG00005013238)
Rainbow trout	MODERN SPECIES	27	ogfod1 (ENSOMYG00000020608)	ENSOMYG00000020632	ENSOMYG00000020637	ENSOMYG00000020646	ENSOMYG00000020670	vrk3 (ENSOMYG00000020679)	ENSOMYG00000020699	gfod2 (ENSOMYG00000020714)	ENSOMYG00000075072	ENSOMYG00000020730	thap11 (ENSOMYG00000020748)	nrn1lb (ENSOMYG00000064947)	ENSOMYG00000020792	ENSOMYG00000020834	ENSOMYG00000020867	ENSOMYG00000020925 ##22	ENSOMYG00000020963	ENSOMYG00000020965	ENSOMYG00000020980	ENSOMYG00000020997	ENSOMYG00000076127	ENSOMYG00000021010	ENSOMYG00000021042	ENSOMYG00000021166	furina (ENSOMYG00000021269)	ENSOMYG00000070883	fes (ENSOMYG00000021553)	ENSOMYG00000048208	rhcg (ENSOMYG00000021891)	kif7 (ENSOMYG00000022994)	ENSOMYG00000023012
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	18	ctcf (ENSELUG00000016486)	ripor1 (ENSELUG00000016545)	pard6a (ENSELUG00000016570)	ranbp10 (ENSELUG00000016672)	tsnaxip1 (ENSELUG00000016742)	edc4 (ENSELUG00000016964)	ENSELUG00000017006	pskh1 (ENSELUG00000000632)	mbtps1 (ENSELUG00000017072)	SLC38A8 (ENSELUG00000000642)	necab2 (ENSELUG00000017147)	hydin (ENSELUG00000027303)	pnp6 (ENSELUG00000017243)	calb2a (ENSELUG00000000653)	ENSELUG00000017331	got2a (ENSELUG00000017355) ##22	ENSELUG00000017378	chka (ENSELUG00000017397)	kmt5b (ENSELUG00000017419)	si:dkey-12e7.1 (ENSELUG00000017424)	ENSELUG00000017435	arpin (ENSELUG00000017441)	ENSELUG00000000674	igf1ra (ENSELUG00000017508)	synm (ENSELUG00000017530)	TTC23 (ENSELUG00000017593)	mef2aa (ENSELUG00000017630)	ENSELUG00000000700	nr2f2 (ENSELUG00000017695)	chd2 (ENSELUG00000017981)	fam174b (ENSELUG00000018046)
Northern pike	MODERN SPECIES	1	ENSELUG00000011890	ENSELUG00000025186	CTCF (ENSELUG00000011848)	vrk3 (ENSELUG00000011786)	ENSELUG00000028128	gfod2 (ENSELUG00000011758)	ENSELUG00000011726	thap11 (ENSELUG00000011681)	nrn1lb (ENSELUG00000034546)	dnaaf1 (ENSELUG00000011663)	SLC38A8 (ENSELUG00000011617)	cmtr2 (ENSELUG00000011595)	ENSELUG00000030803	calb2b (ENSELUG00000000417)	ENSELUG00000000413	got2b (ENSELUG00000011538) ##22	slc38a7 (ENSELUG00000011478)	si:ch211-122f10.4 (ENSELUG00000011466)	ENSELUG00000031474	E2F4 (ENSELUG00000011406)	ENSELUG00000011338	ENSELUG00000027470	RHCG (ENSELUG00000011035)	furina (ENSELUG00000011197)	kif7 (ENSELUG00000011003)	ENSELUG00000001372	CLEC18A (ENSELUG00000010944)	ENSELUG00000010879	ENSELUG00000010861	pdcd5 (ENSELUG00000010839)	mvda (ENSELUG00000010740)
Sarcopterygii	ANCESTRAL SPECIES	392												ENSGT00940000161773	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00390000014869	ENSGT00940000153577.C
Coelacanth	MODERN SPECIES	1386																GOT2 (ENSLACG00000001254) ##22	VAC14 (ENSLACG00000002801)	ENSLACG00000010267	MTSS2 (ENSLACG00000011766)
Tetrapoda	ANCESTRAL SPECIES	105	ENSGT00940000165483	ENSGT00900000141128	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939
Anura	ANCESTRAL SPECIES	64	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000165483	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000156939	ENSGT00390000004215.a.b.b.c.a	ENSGT00940000154521.B	ENSGT00390000001622	ENSGT00950000182872.f.b.a	ENSGT00940000153577.C	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a	ENSGT00940000157918	ENSGT00390000004913
Leishan spiny toad	MODERN SPECIES	1	PDPR (ENSLLEG00000030249)	ENSLLEG00000030294	ST3GAL2 (ENSLLEG00000030313)	ENSLLEG00000030323	EXOSC6 (ENSLLEG00000030329)	AARS1 (ENSLLEG00000030340)	FCSK (ENSLLEG00000030382)	COG4 (ENSLLEG00000030449)	SF3B3 (ENSLLEG00000030483)	ENSLLEG00000030504	MTSS2 (ENSLLEG00000030517)	ENSLLEG00000030574	VAC14 (ENSLLEG00000030615)	CMTR2 (ENSLLEG00000020841)	CALB2 (ENSLLEG00000020913)	GOT2 (ENSLLEG00000021310) ##22	SLC38A7 (ENSLLEG00000021936)	CNOT1 (ENSLLEG00000022050)	MMP15 (ENSLLEG00000022462)	ENSLLEG00000023491	CCDC113 (ENSLLEG00000023600)	ENSLLEG00000023665	NDRG4 (ENSLLEG00000023728)	SETD6 (ENSLLEG00000024545)	USB1 (ENSLLEG00000024674)	ZNF319 (ENSLLEG00000024882)	ENSLLEG00000025276	ENSLLEG00000025364	ENSLLEG00000025761	KATNB1 (ENSLLEG00000025788)	DRC7 (ENSLLEG00000025975)
Frog	MODERN SPECIES	4	pdpr (ENSXETG00000007670)	ENSXETG00000007669	aars1 (ENSXETG00000007668)	exosc6 (ENSXETG00000007667)	st3gal2.1 (ENSXETG00000007666)	fcsk (ENSXETG00000040982)	ENSXETG00000047559	cog4 (ENSXETG00000015847)	sf3b3 (ENSXETG00000032869)	il34 (ENSXETG00000043373)	vac14 (ENSXETG00000015863)	mtss2 (ENSXETG00000015857)	hydin (ENSXETG00000015878)	cmtr2 (ENSXETG00000015884)	calb2 (ENSXETG00000040382)	shtn1 (ENSXETG00000015896) ##22	slc38a7 (ENSXETG00000015897)	cnot1 (ENSXETG00000015900)	ENSXETG00000046418	mmp15 (ENSXETG00000025032)	csnk2a2 (ENSXETG00000013728)	ccdc113 (ENSXETG00000048150)	ENSXETG00000041906	gins3 (ENSXETG00000013741)	ndrg4 (ENSXETG00000013742)	znf319 (ENSXETG00000013744)	tepp (ENSXETG00000035867)	ENSXETG00000043752	ENSXETG00000049283	kifc3 (ENSXETG00000013755)	katnb1 (ENSXETG00000025041)
Amniota	ANCESTRAL SPECIES	38	ENSGT00900000141128	ENSGT00940000153348.A	ENSGT00940000157335	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000161773	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000153348.A	ENSGT00940000157335	ENSGT00940000166017	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000161773	ENSGT00940000163228	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00950000185219	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309
Lepidosauria	ANCESTRAL SPECIES	63							ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00950000185219	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309
Episquamata	ANCESTRAL SPECIES	11	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000158845	ENSGT00390000007606	ENSGT00530000063884.b	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00950000185219	ENSGT00390000001622	ENSGT00950000185282	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596
Toxicofera	ANCESTRAL SPECIES	129															ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136
Elapidae	ANCESTRAL SPECIES	26	ENSGT00390000003210	ENSGT00940000157918	ENSGT00940000154022.a.a	ENSGT00940000154824.b	ENSGT00390000013928	ENSGT00940000160309	ENSGT00390000004596	ENSGT00940000156939.c	ENSGT00390000004554	ENSGT00390000004215.a.b.b.c.a	ENSGT00940000154521.B	ENSGT01020000230389.a.a.b	ENSGT00940000155200.d.a	ENSGT00390000008765	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000155200.d.b	ENSGT00390000017697.b	ENSGT00390000004417.b	ENSGT00940000160052	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000158845	ENSGT00390000007606	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a
Indian cobra	MODERN SPECIES	12	GPI (ENSNNAG00000005274)	SS18L2 (ENSNNAG00000005229)	GARRE1 (ENSNNAG00000005126)	KIFC3 (ENSNNAG00000004991)	CNGB1 (ENSNNAG00000004636)	TEPP (ENSNNAG00000004415)	ZNF319 (ENSNNAG00000004368)	USB1 (ENSNNAG00000004349)	MMP15 (ENSNNAG00000004311)	CFAP20 (ENSNNAG00000004284)	CSNK2A2 (ENSNNAG00000004255)	CCDC113 (ENSNNAG00000004209)	PRSS54 (ENSNNAG00000004161)	ENSNNAG00000004115	ENSNNAG00000004080	GOT2 (ENSNNAG00000004049) ##22	SLC38A7 (ENSNNAG00000004017)	ENSNNAG00000003942	CIAO2B (ENSNNAG00000003923)	MATCAP1 (ENSNNAG00000003858)	LCAT (ENSNNAG00000003794)	AGRP (ENSNNAG00000018927)	ATP6V0D1 (ENSNNAG00000018924)	HSD11B2 (ENSNNAG00000018911)	FHOD1 (ENSNNAG00000018890)	ENSNNAG00000018879	KCTD19 (ENSNNAG00000018871)	ST3GAL2 (ENSNNAG00000018860)	FCSK (ENSNNAG00000018853)	COG4 (ENSNNAG00000018838)	SF3B3 (ENSNNAG00000018817)
Elapidae_a	ANCESTRAL SPECIES	45	ENSGT00940000157918	ENSGT00940000154022.a.a	ENSGT00940000154824.b	ENSGT00940000162283	ENSGT00390000013928	ENSGT00940000160309	ENSGT00390000004596	ENSGT00940000156939.c	ENSGT00390000004554	ENSGT00390000004215.a.b.b.c.a	ENSGT00940000154521.B	ENSGT01020000230389.a.a.b	ENSGT00940000155200.d.a	ENSGT00390000008765	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000155200.d.b	ENSGT00390000017697.b	ENSGT00390000004417.b	ENSGT00940000160052	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000158845	ENSGT00390000007606	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a.f
Acanthophiinae	ANCESTRAL SPECIES	43	ENSGT00940000160407	ENSGT00940000157918	ENSGT00940000154022.a.a	ENSGT00940000154824.b	ENSGT00940000162283	ENSGT00390000013928	ENSGT00940000160309	ENSGT00390000004596	ENSGT00940000156939.c	ENSGT00390000004554	ENSGT00390000004215.a.b.b.c.a	ENSGT00940000154521.B	ENSGT01020000230389.a.a.b	ENSGT00940000155200.d.a	ENSGT00390000008765	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000155200.d.b	ENSGT00390000017697.b	ENSGT00390000004417.b	ENSGT00940000160052	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000158845	ENSGT00390000007606	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a.f
Mainland tiger snake	MODERN SPECIES	491									USB1 (ENSNSUG00000007588)	ENSNSUG00000007683	CFAP20 (ENSNSUG00000007684)	CSNK2A2 (ENSNSUG00000007687)	PRSS54 (ENSNSUG00000007694)	ENSNSUG00000007695	ENSNSUG00000007696	GOT2 (ENSNSUG00000007697) ##22	SLC38A7 (ENSNSUG00000007698)	ENSNSUG00000007699
Eastern brown snake	MODERN SPECIES	69	GARRE1 (ENSPTXG00000006770)	SS18L2 (ENSPTXG00000006771)	KATNB1 (ENSPTXG00000006772)	KIFC3 (ENSPTXG00000006817)	CNGB1 (ENSPTXG00000006830)	TEPP (ENSPTXG00000006999)	ZNF319 (ENSPTXG00000007000)	USB1 (ENSPTXG00000007001)	MMP15 (ENSPTXG00000007002)	CFAP20 (ENSPTXG00000007003)	CSNK2A2 (ENSPTXG00000007004)	CCDC113 (ENSPTXG00000007005)	PRSS54 (ENSPTXG00000007007)	ENSPTXG00000007008	ENSPTXG00000007009	GOT2 (ENSPTXG00000007014) ##22	SLC38A7 (ENSPTXG00000007015)	ENSPTXG00000007016	CIAO2B (ENSPTXG00000007017)	MATCAP1 (ENSPTXG00000007018)	LCAT (ENSPTXG00000007020)	ENSPTXG00000007021	AGRP (ENSPTXG00000007022)	ATP6V0D1 (ENSPTXG00000007023)	HSD11B2 (ENSPTXG00000007024)	FHOD1 (ENSPTXG00000007042)	ENSPTXG00000007384	ENSPTXG00000007388	ST3GAL2 (ENSPTXG00000007390)	FCSK (ENSPTXG00000007393)	COG4 (ENSPTXG00000007398)
Blue-lipped sea krait	MODERN SPECIES	2964															ENSLLTG00000011067	GOT2 (ENSLLTG00000011038) ##22	SLC38A7 (ENSLLTG00000011011)
Lizard	MODERN SPECIES	1151									ST3GAL2 (ENSACAG00000002447)	FCSK (ENSACAG00000002266)	COG4 (ENSACAG00000001978)	SF3B3 (ENSACAG00000001817)	MTSS2 (ENSACAG00000001650)	VAC14 (ENSACAG00000001438)	ENSACAG00000001073	ENSACAG00000000778 ##22	ENSACAG00000044360	ENSACAG00000037165	ENSACAG00000000707	ENSACAG00000026479
Laterata	ANCESTRAL SPECIES	19	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000158845	ENSGT00390000007606	ENSGT00530000063884.b	ENSGT00940000163363.e.a.a.a.b	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT00950000185282	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000022492	ENSPMRG00000022486	ENSPMRG00000022470	ENSPMRG00000022462	ST3GAL2 (ENSPMRG00000022459)	FCSK (ENSPMRG00000022449)	ENSPMRG00000022415	ENSPMRG00000022407	ENSPMRG00000022400	SF3B3 (ENSPMRG00000022387)	MTSS2 (ENSPMRG00000022376)	VAC14 (ENSPMRG00000022052)	ENSPMRG00000021468	CALB2 (ENSPMRG00000021301)	ENSPMRG00000021277	GOT2 (ENSPMRG00000021268) ##22	SLC38A7 (ENSPMRG00000021261)	ENSPMRG00000021246	CNOT1 (ENSPMRG00000021154)	SETD6 (ENSPMRG00000021119)	NDRG4 (ENSPMRG00000020749)	GINS3 (ENSPMRG00000020657)	PRSS54 (ENSPMRG00000020647)	CCDC113 (ENSPMRG00000020635)	CSNK2A2 (ENSPMRG00000020610)	CFAP20 (ENSPMRG00000020598)	MMP15 (ENSPMRG00000020590)	USB1 (ENSPMRG00000020546)	ZNF319 (ENSPMRG00000020531)	TEPP (ENSPMRG00000020520)	KIFC3 (ENSPMRG00000020481)
Argentine black and white tegu	MODERN SPECIES	57	COG4 (ENSSMRG00000004408)	ATP6V0D1 (ENSSMRG00000004396)	HSD11B2 (ENSSMRG00000004395)	FHOD1 (ENSSMRG00000004393)	ENSSMRG00000004384	KCTD19 (ENSSMRG00000004358)	ENSSMRG00000004354	ST3GAL2 (ENSSMRG00000004351)	FCSK (ENSSMRG00000004082)	SF3B3 (ENSSMRG00000002475)	MTSS2 (ENSSMRG00000002424)	VAC14 (ENSSMRG00000002414)	ENSSMRG00000002294	CALB2 (ENSSMRG00000002286)	ENSSMRG00000002282	GOT2 (ENSSMRG00000002281) ##22	SLC38A7 (ENSSMRG00000002274)	ENSSMRG00000002239	CNOT1 (ENSSMRG00000002227)	SETD6 (ENSSMRG00000002215)	NDRG4 (ENSSMRG00000002171)	ENSSMRG00000002164	PRSS54 (ENSSMRG00000002145)	CCDC113 (ENSSMRG00000002136)	CSNK2A2 (ENSSMRG00000002129)	CFAP20 (ENSSMRG00000002125)	MMP15 (ENSSMRG00000002113)	ZNF319 (ENSSMRG00000002112)	TEPP (ENSSMRG00000001829)	ENSSMRG00000001807	KIFC3 (ENSSMRG00000001793)
tuatara	MODERN SPECIES	1930	POLR3GL (ENSSPUG00000001305)	TXNIP (ENSSPUG00000001302)	ENSSPUG00000001224	ENSSPUG00000001218	ENSSPUG00000001204	BOLA1 (ENSSPUG00000001195)	SV2A (ENSSPUG00000001040)	SF3B4 (ENSSPUG00000001028)	ENSSPUG00000001025	MTMR11 (ENSSPUG00000000998)	OTUD7B (ENSSPUG00000000961)	VPS45 (ENSSPUG00000000947)	PLEKHO1 (ENSSPUG00000000927)	ANP32E (ENSSPUG00000000918)	ENSSPUG00000000905	GOT2 (ENSSPUG00000000897) ##22	APH1A (ENSSPUG00000000880)	CA14 (ENSSPUG00000000821)	MRPS21 (ENSSPUG00000000814)	PRPF3 (ENSSPUG00000000809)	ENSSPUG00000000795	ENSSPUG00000000604	ECM1 (ENSSPUG00000000589)	ENSSPUG00000000586	ENSSPUG00000000582	ENSSPUG00000000575	PI4KB (ENSSPUG00000000554)	ENSSPUG00000000431	ENSSPUG00000000418	ZNF687 (ENSSPUG00000000413)	PSMD4 (ENSSPUG00000000388)
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00940000166017	ENSGT00940000163363.e.a.b	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00950000185219	ENSGT00390000001622	ENSGT00940000160042	ENSGT00950000183151.b	ENSGT00940000159821	ENSGT00390000003774.a.a	ENSGT00390000003774.b	ENSGT00390000009358	ENSGT00510000050177	ENSGT00940000154491.c
Cryptodira	ANCESTRAL SPECIES	122										ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000167814	ENSGT00900000141128	ENSGT00940000165483	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22
Emydidae	ANCESTRAL SPECIES	308															ENSGT00960000186694	ENSGT00950000183082.a ##22
painted turtle	MODERN SPECIES	1642																GOT2 (ENSCPBG00000008272) ##22	ENSCPBG00000008284
Three-toed box turtle	MODERN SPECIES	286															ENSTMTG00000011303	GOT2 (ENSTMTG00000011147) ##22
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000167814	ENSGT00900000141128	ENSGT00940000165483	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22
Goode s thornscrub tortoise	MODERN SPECIES	3	ENSGEVG00005018393	SF3B3 (ENSGEVG00005018288)	COG4 (ENSGEVG00005018197)	FCSK (ENSGEVG00005018093)	ST3GAL2 (ENSGEVG00005018064)	AARS1 (ENSGEVG00005017984)	EXOSC6 (ENSGEVG00005017960)	ENSGEVG00005017942	ENSGEVG00005017850	MTSS2 (ENSGEVG00005017782)	VAC14 (ENSGEVG00005017729)	ENSGEVG00005017655	CMTR2 (ENSGEVG00005017636)	CALB2 (ENSGEVG00005017541)	ENSGEVG00005017505	GOT2 (ENSGEVG00005017476) ##22	ENSGEVG00005017416	ENSGEVG00005017286	ENSGEVG00005017187	ENSGEVG00005017143	ENSGEVG00005017106	ENSGEVG00005017062	ENSGEVG00005016992	ENSGEVG00005016946	ENSGEVG00005016896	ENSGEVG00005016864	ENSGEVG00005016841	RIPOR1 (ENSGEVG00005016651)	ENSGEVG00005016565	ENSGEVG00005016518	ENSGEVG00005016507
Abingdon island giant tortoise	MODERN SPECIES	1013															CALB2 (ENSCABG00000015524)	GOT2 (ENSCABG00000015533) ##22	ENSCABG00000015551	ENSCABG00000015553
Chinese turtle	MODERN SPECIES	8																GOT2 (ENSPSIG00000006922) ##22	ENSPSIG00000001423
Archosauria	ANCESTRAL SPECIES	14	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00390000004877	ENSGT00940000161003	ENSGT00940000156672	ENSGT00940000153717.b	ENSGT00940000163363.e.a.a.b	ENSGT00940000163363.e.a.b	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00900000141128	ENSGT00940000165483
Aves	ANCESTRAL SPECIES	22	ENSGT00390000008931	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C
Neognathae	ANCESTRAL SPECIES	13	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00390000007606.b	ENSGT00530000063884.b	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00390000007606.b	ENSGT00530000063884.b	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00390000007606.b	ENSGT00390000007606.a	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c	ENSGT00900000141128
Japanese quail	MODERN SPECIES	2	FA2H (ENSCJPG00005005057)	MLKL (ENSCJPG00005005123)	RFWD3 (ENSCJPG00005005139)	GLG1 (ENSCJPG00005005157)	PDPR (ENSCJPG00005006471)	ST3GAL2 (ENSCJPG00005006544)	COG4 (ENSCJPG00005006566)	SF3B3 (ENSCJPG00005006684)	ENSCJPG00005007043	ENSCJPG00005007046	MTSS2 (ENSCJPG00005007047)	VAC14 (ENSCJPG00005007146)	ENSCJPG00005007492	CMTR2 (ENSCJPG00005007521)	ENSCJPG00005007523	GOT2 (ENSCJPG00005007528) ##22	SLC38A7 (ENSCJPG00005007779)	CNOT1 (ENSCJPG00005007823)	ENSCJPG00005011244	SETD6 (ENSCJPG00005011245)	ENSCJPG00005011246	Agrp (ENSCJPG00005011247)	ATP6V0D1 (ENSCJPG00005011251)	HSD11B2 (ENSCJPG00005011285)	FHOD1 (ENSCJPG00005011286)	SLC9A5 (ENSCJPG00005011309)	ENSCJPG00005011310	ENSCJPG00005011311	KCTD19 (ENSCJPG00005011312)	TPPP3 (ENSCJPG00005011313)	ZDHHC1 (ENSCJPG00005011314)
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00390000007606.b	ENSGT00390000007606.a	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c	ENSGT00900000141128
Chicken	MODERN SPECIES	2	GLG1 (ENSGALG00010023252)	PDPR (ENSGALG00010023225)	ST3GAL2 (ENSGALG00010023220)	FCSK (ENSGALG00010023213)	COG4 (ENSGALG00010023203)	SF3B3 (ENSGALG00010023190)	ENSGALG00010024587	ENSGALG00010024578	MTSS2 (ENSGALG00010024566)	VAC14 (ENSGALG00010022868)	HYDIN (ENSGALG00010022845)	CMTR2 (ENSGALG00010022827)	ENSGALG00010022773	CALB2 (ENSGALG00010022382)	ENSGALG00010021464	GOT2 (ENSGALG00010021438) ##22	SLC38A7 (ENSGALG00010021426)	CNOT1 (ENSGALG00010021665)	SETD6 (ENSGALG00010021656)	Agrp (ENSGALG00010021641)	ATP6V0D1 (ENSGALG00010021637)	HSD11B2 (ENSGALG00010021624)	FHOD1 (ENSGALG00010021619)	SLC9A5 (ENSGALG00010021607)	PLEKHG4 (ENSGALG00010021602)	ENSGALG00010024456	ENSGALG00010024442	TPPP3 (ENSGALG00010024386)	ZDHHC1 (ENSGALG00010024378)	ENSGALG00010024779	ENSGALG00010024766
Turkey	MODERN SPECIES	4	ENSMGAG00000002114	ENSMGAG00000002010	ENSMGAG00000019551	ENSMGAG00000001957	ENSMGAG00000001694	ENSMGAG00000001817	ENSMGAG00000001754	ENSMGAG00000001760	ENSMGAG00000018139	ENSMGAG00000001718	ENSMGAG00000018975	ENSMGAG00000001997	ENSMGAG00000001908	ENSMGAG00000018027	ENSMGAG00000001877	ENSMGAG00000001856 ##22	ENSMGAG00000001775	ENSMGAG00000001720	ENSMGAG00000015573	ENSMGAG00000001344	ENSMGAG00000001646	ENSMGAG00000020823	ENSMGAG00000001631	ENSMGAG00000001619	ENSMGAG00000001597	ENSMGAG00000001578	ENSMGAG00000001529	ENSMGAG00000001490	ENSMGAG00000001456	ENSMGAG00000021823	ENSMGAG00000001428
Anatidae	ANCESTRAL SPECIES	44	ENSGT00390000008931	ENSGT00390000011262	ENSGT00940000159082	ENSGT00530000063113.B.u	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00390000007606.b	ENSGT00530000063884.b	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c
Pink-footed goose	MODERN SPECIES	28	MLKL (ENSABRG00000002326)	RFWD3 (ENSABRG00000002338)	GLG1 (ENSABRG00000002368)	PDPR (ENSABRG00000002440)	ST3GAL2 (ENSABRG00000002468)	FCSK (ENSABRG00000002485)	COG4 (ENSABRG00000002522)	SF3B3 (ENSABRG00000002553)	ENSABRG00000002614	MTSS2 (ENSABRG00000002637)	VAC14 (ENSABRG00000002673)	ENSABRG00000002819	CMTR2 (ENSABRG00000003192)	ENSABRG00000003198	CALB2 (ENSABRG00000003213)	GOT2 (ENSABRG00000003248) ##22	SLC38A7 (ENSABRG00000003261)	CNOT1 (ENSABRG00000003284)	SETD6 (ENSABRG00000003464)	ENSABRG00000003487	AGRP (ENSABRG00000003531)	ATP6V0D1 (ENSABRG00000003539)	HSD11B2 (ENSABRG00000003550)	FHOD1 (ENSABRG00000003600)	SLC9A5 (ENSABRG00000003677)	PLEKHG4 (ENSABRG00000003723)	KCTD19 (ENSABRG00000003768)	ENSABRG00000003811	TPPP3 (ENSABRG00000003829)	ZDHHC1 (ENSABRG00000003844)	ENSABRG00000003851
Duck	MODERN SPECIES	3	CYLD (ENSAPLG00000012780)	SNX20 (ENSAPLG00000013062)	NKD1 (ENSAPLG00000013087)	ENSAPLG00000027872	BRD7 (ENSAPLG00000013363)	ADCY7 (ENSAPLG00000013887)	TENT4B (ENSAPLG00000014941)	CNEP1R1 (ENSAPLG00000025705)	ENSAPLG00000026611	HEATR3 (ENSAPLG00000009802)	ZNF423 (ENSAPLG00000009508)	ENSAPLG00000027161	ENSAPLG00000027305	ENSAPLG00000006819	ENSAPLG00000006820	GOT2 (ENSAPLG00000006867) ##22	SLC38A7 (ENSAPLG00000007029)	CNOT1 (ENSAPLG00000007162)	SETD6 (ENSAPLG00000007404)	ATP6V0D1 (ENSAPLG00000007502)	HSD11B2 (ENSAPLG00000022410)	FHOD1 (ENSAPLG00000007626)	PLEKHG4 (ENSAPLG00000007883)	KCTD19 (ENSAPLG00000008025)	ENSAPLG00000020459	TPPP3 (ENSAPLG00000027259)	ZDHHC1 (ENSAPLG00000009433)	ENSAPLG00000026947	EXOSC6 (ENSAPLG00000017781)	AARS1 (ENSAPLG00000008519)	ENSAPLG00000027474
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00390000007606.b	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c	ENSGT00900000141128
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00390000008931	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00390000007606.b	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c	ENSGT00900000141128
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	4	ENSSHBG00005000363	ENSSHBG00005000356	ENSSHBG00005000350	ENSSHBG00005000349	ENSSHBG00005000346	ENSSHBG00005000345	ENSSHBG00005000342	ENSSHBG00005000341	ENSSHBG00005000336	ENSSHBG00005000333	ENSSHBG00005000331	ENSSHBG00005000325	ENSSHBG00005000318	ENSSHBG00005000311	ENSSHBG00005000306	ENSSHBG00005000304 ##22	ENSSHBG00005000302	ENSSHBG00005000295	ENSSHBG00005000293	ENSSHBG00005000291	ENSSHBG00005000290	ENSSHBG00005000288	ENSSHBG00005000286	ENSSHBG00005000284	ENSSHBG00005000282	ENSSHBG00005000279	ENSSHBG00005000276	ENSSHBG00005000269	ENSSHBG00005000266	ENSSHBG00005000257	ENSSHBG00005000255
Kakapo	MODERN SPECIES	19	ENSSHBG00005001511	MLKL (ENSSHBG00005001593)	RFWD3 (ENSSHBG00005001691)	ENSSHBG00005001728	ENSSHBG00005001794	ENSSHBG00005001830	ENSSHBG00005001873	FCSK (ENSSHBG00005001918)	COG4 (ENSSHBG00005001982)	ENSSHBG00005002023	ENSSHBG00005002075	ENSSHBG00005002097	CMTR2 (ENSSHBG00005002129)	ENSSHBG00005002145	ENSSHBG00005002160	ENSSHBG00005002172 ##22	ENSSHBG00005002187	ENSSHBG00005002202	MMP15 (ENSSHBG00005002218)	CFAP20 (ENSSHBG00005002228)	CSNK2A2 (ENSSHBG00005002239)	GINS3 (ENSSHBG00005002255)	ENSSHBG00005002274	ENSSHBG00005002309	ENSSHBG00005002327	NUTF2 (ENSSHBG00005002342)	ENSSHBG00005002366	NRN1L (ENSSHBG00005002390)	PSKH1 (ENSSHBG00005002407)	CTRL (ENSSHBG00005002475)	EXOC3L1 (ENSSHBG00005002597)
Golden eagle	MODERN SPECIES	25	MLKL (ENSACCG00020002391)	RFWD3 (ENSACCG00020002410)	GLG1 (ENSACCG00020002459)	PDPR (ENSACCG00020002520)	ST3GAL2 (ENSACCG00020002550)	FCSK (ENSACCG00020002577)	COG4 (ENSACCG00020002615)	SF3B3 (ENSACCG00020002647)	ENSACCG00020002677	MTSS2 (ENSACCG00020002700)	VAC14 (ENSACCG00020002737)	ENSACCG00020002768	CMTR2 (ENSACCG00020002794)	ENSACCG00020002809	CALB2 (ENSACCG00020002836)	GOT2 (ENSACCG00020002856) ##22	SLC38A7 (ENSACCG00020002882)	CNOT1 (ENSACCG00020002942)	SETD6 (ENSACCG00020003000)	AGRP (ENSACCG00020003014)	ATP6V0D1 (ENSACCG00020003030)	HSD11B2 (ENSACCG00020003045)	FHOD1 (ENSACCG00020003088)	SLC9A5 (ENSACCG00020003128)	PLEKHG4 (ENSACCG00020003163)	KCTD19 (ENSACCG00020003219)	TPPP3 (ENSACCG00020003241)	ZDHHC1 (ENSACCG00020003257)	ENSACCG00020003284	ENSACCG00020003337	EXOSC6 (ENSACCG00020003376)
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00390000008931	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000161773	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c	ENSGT00900000141128	ENSGT00940000153348.A
Great tit	MODERN SPECIES	2	RFWD3 (ENSPMJG00000000568)	GLG1 (ENSPMJG00000000544)	PDPR (ENSPMJG00000000492)	ST3GAL2 (ENSPMJG00000000470)	FCSK (ENSPMJG00000000390)	COG4 (ENSPMJG00000000354)	SF3B3 (ENSPMJG00000000287)	ENSPMJG00000000251	ENSPMJG00000000244	MTSS2 (ENSPMJG00000000188)	VAC14 (ENSPMJG00000000133)	CMTR2 (ENSPMJG00000000131)	ENSPMJG00000000124	CALB2 (ENSPMJG00000000115)	ENSPMJG00000000095	GOT2 (ENSPMJG00000000054) ##22	SLC38A7 (ENSPMJG00000016709)	CNOT1 (ENSPMJG00000014709)	SETD6 (ENSPMJG00000014708)	ENSPMJG00000014707	AGRP (ENSPMJG00000014706)	ATP6V0D1 (ENSPMJG00000014705)	HSD11B2 (ENSPMJG00000014698)	FHOD1 (ENSPMJG00000014318)	SLC9A5 (ENSPMJG00000014250)	ENSPMJG00000014246	ENSPMJG00000014239	TPPP3 (ENSPMJG00000014236)	ZDHHC1 (ENSPMJG00000014234)	ENSPMJG00000014232	ENSPMJG00000014226
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00390000008931	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000161773.h	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c	ENSGT00900000141128	ENSGT00940000153348.A
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000161773.h	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT01100000263690	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c	ENSGT00900000141128
Passeroidea	ANCESTRAL SPECIES	17	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00940000168336	ENSGT00940000163363.e.b	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000161773.h	ENSGT00950000182991.A.a.c.b	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT01100000263690	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00940000155365.b	ENSGT00940000154258.b	ENSGT00390000002200.a.a	ENSGT00940000159716	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000153875.d.b	ENSGT00940000159191	ENSGT00940000165483.c	ENSGT00900000141128
Common canary	MODERN SPECIES	14	MLKL (ENSSCAG00000005330)	RFWD3 (ENSSCAG00000005335)	GLG1 (ENSSCAG00000005361)	PDPR (ENSSCAG00000005443)	ST3GAL2 (ENSSCAG00000005451)	FCSK (ENSSCAG00000005457)	COG4 (ENSSCAG00000005465)	SF3B3 (ENSSCAG00000005473)	ENSSCAG00000005491	ENSSCAG00000005496	MTSS2 (ENSSCAG00000005530)	VAC14 (ENSSCAG00000005653)	ENSSCAG00000005660	ENSSCAG00000005665	CALB2 (ENSSCAG00000005669)	GOT2 (ENSSCAG00000005676) ##22	ENSSCAG00000005682	SLC38A7 (ENSSCAG00000005686)	CNOT1 (ENSSCAG00000005696)	SETD6 (ENSSCAG00000005714)	ENSSCAG00000005726	AGRP (ENSSCAG00000005748)	ATP6V0D1 (ENSSCAG00000005753)	HSD11B2 (ENSSCAG00000005758)	FHOD1 (ENSSCAG00000005767)	SLC9A5 (ENSSCAG00000005773)	PLEKHG4 (ENSSCAG00000005782)	TPPP3 (ENSSCAG00000005787)	ZDHHC1 (ENSSCAG00000005790)	ENSSCAG00000005792	ENSSCAG00000005796
Zebra finch	MODERN SPECIES	2	MLKL (ENSTGUG00000006329)	RFWD3 (ENSTGUG00000006323)	GLG1 (ENSTGUG00000006272)	PDPR (ENSTGUG00000006237)	ST3GAL2 (ENSTGUG00000006220)	FCSK (ENSTGUG00000006176)	COG4 (ENSTGUG00000006122)	SF3B3 (ENSTGUG00000006082)	IL34 (ENSTGUG00000006078)	ENSTGUG00000020133	MTSS2 (ENSTGUG00000006038)	VAC14 (ENSTGUG00000006004)	CMTR2 (ENSTGUG00000006002)	ENSTGUG00000005995	CALB2 (ENSTGUG00000005987)	GOT2 (ENSTGUG00000005973) ##22	ENSTGUG00000026941	SLC38A7 (ENSTGUG00000005957)	CNOT1 (ENSTGUG00000005919)	SETD6 (ENSTGUG00000005902)	ENSTGUG00000005914	AGRP (ENSTGUG00000005911)	ATP6V0D1 (ENSTGUG00000005881)	HSD11B2 (ENSTGUG00000005862)	FHOD1 (ENSTGUG00000005820)	SLC9A5 (ENSTGUG00000005791)	PLEKHG4 (ENSTGUG00000005770)	TPPP3 (ENSTGUG00000005766)	ZDHHC1 (ENSTGUG00000005755)	ENSTGUG00000005749	ENSTGUG00000005736
Medium ground finch	MODERN SPECIES	46	MLKL (ENSGFOG00000007335)	RFWD3 (ENSGFOG00000007340)	GLG1 (ENSGFOG00000007384)	PDPR (ENSGFOG00000007770)	ST3GAL2 (ENSGFOG00000007787)	FCSK (ENSGFOG00000007852)	COG4 (ENSGFOG00000008695)	SF3B3 (ENSGFOG00000008722)	ENSGFOG00000008750	ENSGFOG00000008760	MTSS2 (ENSGFOG00000008771)	VAC14 (ENSGFOG00000008843)	ENSGFOG00000010732	ENSGFOG00000010734	CALB2 (ENSGFOG00000010742)	GOT2 (ENSGFOG00000010746) ##22	ENSGFOG00000010751	SLC38A7 (ENSGFOG00000010754)	CNOT1 (ENSGFOG00000010837)	SETD6 (ENSGFOG00000011179)	ENSGFOG00000011187	AGRP (ENSGFOG00000011188)	ATP6V0D1 (ENSGFOG00000011196)	HSD11B2 (ENSGFOG00000011202)	FHOD1 (ENSGFOG00000011208)	SLC9A5 (ENSGFOG00000011227)	PLEKHG4 (ENSGFOG00000011239)	TPPP3 (ENSGFOG00000011256)	ZDHHC1 (ENSGFOG00000011261)	ENSGFOG00000011264	ENSGFOG00000011266
Flycatcher	MODERN SPECIES	2	RFWD3 (ENSFALG00000007435)	GLG1 (ENSFALG00000007415)	ENSFALG00000007403	ST3GAL2 (ENSFALG00000007390)	FCSK (ENSFALG00000007382)	COG4 (ENSFALG00000007380)	SF3B3 (ENSFALG00000007372)	ENSFALG00000007368	ENSFALG00000027387	MTSS2 (ENSFALG00000007365)	VAC14 (ENSFALG00000007323)	CMTR2 (ENSFALG00000023808)	ENSFALG00000007304	CALB2 (ENSFALG00000007295)	ENSFALG00000029085	GOT2 (ENSFALG00000007290) ##22	SLC38A7 (ENSFALG00000007289)	CNOT1 (ENSFALG00000007285)	SETD6 (ENSFALG00000028700)	ENSFALG00000007279	AGRP (ENSFALG00000007275)	ATP6V0D1 (ENSFALG00000024009)	HSD11B2 (ENSFALG00000007267)	FHOD1 (ENSFALG00000007236)	SLC9A5 (ENSFALG00000007227)	ENSFALG00000007222	ENSFALG00000025905	TPPP3 (ENSFALG00000025863)	ZDHHC1 (ENSFALG00000028986)	ENSFALG00000026992	ENSFALG00000007202
African ostrich	MODERN SPECIES	184	MLKL (ENSSCUG00000002686)	RFWD3 (ENSSCUG00000002688)	GLG1 (ENSSCUG00000002693)	PDPR (ENSSCUG00000002707)	ST3GAL2 (ENSSCUG00000002710)	COG4 (ENSSCUG00000002712)	SF3B3 (ENSSCUG00000002718)	ENSSCUG00000002725	ENSSCUG00000002729	MTSS2 (ENSSCUG00000002731)	VAC14 (ENSSCUG00000002741)	ENSSCUG00000002753	CMTR2 (ENSSCUG00000002757)	ENSSCUG00000002758	CALB2 (ENSSCUG00000002761)	GOT2 (ENSSCUG00000002766) ##22	SLC38A7 (ENSSCUG00000002769)	CNOT1 (ENSSCUG00000002895)	SETD6 (ENSSCUG00000003100)	ENSSCUG00000003102
Australian saltwater crocodile	MODERN SPECIES	35	RFWD3 (ENSCPRG00005002360)	GLG1 (ENSCPRG00005002333)	PDPR (ENSCPRG00005002324)	ST3GAL2 (ENSCPRG00005002311)	FCSK (ENSCPRG00005002103)	COG4 (ENSCPRG00005002049)	SF3B3 (ENSCPRG00005001994)	ENSCPRG00005001975	MTSS2 (ENSCPRG00005001942)	VAC14 (ENSCPRG00005001890)	ENSCPRG00005001878	ENSCPRG00005001720	CMTR2 (ENSCPRG00005001682)	ENSCPRG00005001680	CALB2 (ENSCPRG00005001659)	GOT2 (ENSCPRG00005001636) ##22	SLC38A7 (ENSCPRG00005001630)	ENSCPRG00005001625	ENSCPRG00005001622	CNOT1 (ENSCPRG00005000725)	ENSCPRG00005000497	CTCF (ENSCPRG00005000477)	RIPOR1 (ENSCPRG00005000408)	AARS1 (ENSCPRG00005000331)	ENSCPRG00005000307	ENSCPRG00005000182	PARD6A (ENSCPRG00005000125)	ENKD1 (ENSCPRG00005000122)	ENSCPRG00005000121	ENSCPRG00005000115	ENSCPRG00005000109
Mammalia	ANCESTRAL SPECIES	13	ENSGT00940000165483	ENSGT00900000141128	ENSGT00940000153348.A	ENSGT00940000157335	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00390000000932	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Platypus	MODERN SPECIES	2	PDPR (ENSOANG00000001154)	ENSOANG00000015277	ENSOANG00000015276	ENSOANG00000050684	AARS1 (ENSOANG00000001157)	ST3GAL2 (ENSOANG00000047638)	FCSK (ENSOANG00000001159)	COG4 (ENSOANG00000001160)	ENSOANG00000050219	MTSS2 (ENSOANG00000044278)	SF3B3 (ENSOANG00000001161)	VAC14 (ENSOANG00000001165)	HYDIN (ENSOANG00000001169)	CMTR2 (ENSOANG00000037913)	CALB2 (ENSOANG00000001170)	GOT2 (ENSOANG00000021389) ##22	SLC38A7 (ENSOANG00000012107)	ENSOANG00000012108	ENSOANG00000036320	CNOT1 (ENSOANG00000012109)	SETD6 (ENSOANG00000012110)	NDRG4 (ENSOANG00000012111)	GINS3 (ENSOANG00000047639)	ENSOANG00000049089	CCDC113 (ENSOANG00000038545)	CSNK2A2 (ENSOANG00000012115)	CFAP20 (ENSOANG00000043483)	MMP15 (ENSOANG00000012117)	USB1 (ENSOANG00000012118)	ZNF319 (ENSOANG00000006540)	ENSOANG00000050224
Theria	ANCESTRAL SPECIES	17	ENSGT00940000159082	ENSGT00940000165483	ENSGT00900000141128	ENSGT00940000153348.A	ENSGT00940000157335	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00390000000932	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309
Marsupialia	ANCESTRAL SPECIES	17	ENSGT00940000165483	ENSGT00900000141128	ENSGT00940000153348.A.a	ENSGT00940000157335	ENSGT00940000154417.b.b	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00390000000932	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309
Marsupialia_b	ANCESTRAL SPECIES	19	ENSGT00940000153348.A.a	ENSGT00940000157335	ENSGT01100000265000	ENSGT00940000154417.b.b	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00390000000932	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Diprotodontia	ANCESTRAL SPECIES	13	ENSGT00900000141128	ENSGT00940000153348.A.a	ENSGT00940000157335	ENSGT01100000265000	ENSGT00940000154417.b.b	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00390000000932	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283
Diprotodontia_a	ANCESTRAL SPECIES	14	ENSGT00900000141128	ENSGT00940000153348.A.a	ENSGT00940000157335	ENSGT01100000265000	ENSGT00940000154417.b.a	ENSGT00940000156356	ENSGT00390000002251	ENSGT00940000154065.a	ENSGT00950000183151.a.a.b	ENSGT00390000000932	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	771						ST3GAL2 (ENSVURG00010001251)	FCSK (ENSVURG00010001204)	COG4 (ENSVURG00010001168)	SF3B3 (ENSVURG00010001128)	ENSVURG00010001106	MTSS2 (ENSVURG00010001087)	VAC14 (ENSVURG00010001062)	HYDIN (ENSVURG00010000914)	CMTR2 (ENSVURG00010000885)	CALB2 (ENSVURG00010000859)	ENSVURG00010000826 ##22	SLC38A7 (ENSVURG00010000800)	CNOT1 (ENSVURG00010000546)	SETD6 (ENSVURG00010000519)	NDRG4 (ENSVURG00010000369)	GINS3 (ENSVURG00010025009)	ENSVURG00010025008	CCDC113 (ENSVURG00010025007)	CSNK2A2 (ENSVURG00010025005)	CFAP20 (ENSVURG00010025001)	MMP15 (ENSVURG00010025000)	USB1 (ENSVURG00010024998)	ZNF319 (ENSVURG00010024997)	TEPP (ENSVURG00010024996)	ENSVURG00010024994	KIFC3 (ENSVURG00010024990)
Common wonbat	MODERN SPECIES	1079												ENSVURG00010021180	ENSVURG00010021171	ENSVURG00010021134	GPR173 (ENSVURG00010021126)	ENSVURG00010021119 ##22	FOXP3 (ENSVURG00010021112)	CCDC22 (ENSVURG00010021103)	CACNA1F (ENSVURG00010011168)	SYP (ENSVURG00010010730)	PRICKLE3 (ENSVURG00010010711)	ENSVURG00010010696	CCDC120 (ENSVURG00010010671)	TFE3 (ENSVURG00010010649)	GRIPAP1 (ENSVURG00010010555)	ENSVURG00010010519	ENSVURG00010010507	PIM2 (ENSVURG00010010500)	SLC35A2 (ENSVURG00010010497)	ENSVURG00010010494	TIMM17B (ENSVURG00010010486)
koala	MODERN SPECIES	146	ENSPCIG00000010685	AARS1 (ENSPCIG00000010681)	ENSPCIG00000007776	ENSPCIG00000007597	ENSPCIG00000033903	ST3GAL2 (ENSPCIG00000013973)	FCSK (ENSPCIG00000013978)	COG4 (ENSPCIG00000013998)	SF3B3 (ENSPCIG00000014927)	ENSPCIG00000014944	MTSS2 (ENSPCIG00000014949)	VAC14 (ENSPCIG00000016182)	HYDIN (ENSPCIG00000014060)	CMTR2 (ENSPCIG00000015810)	CALB2 (ENSPCIG00000015805)	GOT2 (ENSPCIG00000015804) ##22	SLC38A7 (ENSPCIG00000015802)	ENSPCIG00000008390	CNOT1 (ENSPCIG00000007343)	NDRG4 (ENSPCIG00000007168)	GINS3 (ENSPCIG00000003656)	CCDC113 (ENSPCIG00000007149)	CSNK2A2 (ENSPCIG00000007143)	ENSPCIG00000007140	MMP15 (ENSPCIG00000007130)	ZNF319 (ENSPCIG00000007127)	TEPP (ENSPCIG00000007125)	ENSPCIG00000007118	KIFC3 (ENSPCIG00000007108)	KATNB1 (ENSPCIG00000007102)	DRC7 (ENSPCIG00000008593)
Wallaby	MODERN SPECIES	3235																GOT2 (ENSMEUG00000012574) ##22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000020684	ENSSHAG00000007733	ENSSHAG00000028327	ENSSHAG00000024574	ST3GAL2 (ENSSHAG00000028011)	FCSK (ENSSHAG00000000017)	COG4 (ENSSHAG00000001444)	SF3B3 (ENSSHAG00000000372)	ENSSHAG00000032160	VAC14 (ENSSHAG00000005939)	MTSS2 (ENSSHAG00000005429)	HYDIN (ENSSHAG00000007440)	CMTR2 (ENSSHAG00000030558)	ENSSHAG00000020502	ENSSHAG00000022137	ENSSHAG00000011605 ##22	SLC38A7 (ENSSHAG00000011773)	ENSSHAG00000011945	CNOT1 (ENSSHAG00000012187)	SETD6 (ENSSHAG00000012620)	NDRG4 (ENSSHAG00000012683)	GINS3 (ENSSHAG00000026774)	ENSSHAG00000021506	CCDC113 (ENSSHAG00000032387)	CSNK2A2 (ENSSHAG00000003403)	CFAP20 (ENSSHAG00000005074)	MMP15 (ENSSHAG00000006598)	USB1 (ENSSHAG00000024120)	ZNF319 (ENSSHAG00000031600)	TEPP (ENSSHAG00000007313)	ENSSHAG00000024794
Opossum	MODERN SPECIES		ENSMODG00000036403	ENSMODG00000014564	EXOSC6 (ENSMODG00000014523)	AARS1 (ENSMODG00000014518)	ENSMODG00000014494	ST3GAL2 (ENSMODG00000041100)	FCSK (ENSMODG00000014392)	COG4 (ENSMODG00000014387)	SF3B3 (ENSMODG00000014363)	ENSMODG00000014322	MTSS2 (ENSMODG00000014319)	VAC14 (ENSMODG00000014308)	HYDIN (ENSMODG00000014270)	CMTR2 (ENSMODG00000014267)	CALB2 (ENSMODG00000014262)	GOT2 (ENSMODG00000014256) ##22	ENSMODG00000049694	SLC38A7 (ENSMODG00000014234)	ENSMODG00000014213	CNOT1 (ENSMODG00000014199)	SETD6 (ENSMODG00000014173)	NDRG4 (ENSMODG00000014164)	GINS3 (ENSMODG00000014145)	ENSMODG00000047467	ENSMODG00000048605	ENSMODG00000014140	CCDC113 (ENSMODG00000014138)	CSNK2A2 (ENSMODG00000014080)	CFAP20 (ENSMODG00000014076)	MMP15 (ENSMODG00000014071)	USB1 (ENSMODG00000014067)
Eutheria	ANCESTRAL SPECIES	19	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263508.A.d	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183082.a ##22
Hedgehog	MODERN SPECIES	2451																ENSEEUG00000003449 ##22
Common shrew	MODERN SPECIES	1791																GOT2 (ENSSARG00000009136) ##22
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Suina	ANCESTRAL SPECIES	2	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00940000162283
Pig	MODERN SPECIES	14	CA7 (ENSSSCG00000038785)	TERB1 (ENSSSCG00000035639)	DYNC1LI2 (ENSSSCG00000036210)	CMTM4 (ENSSSCG00000032632)	ENSSSCG00000038151	CMTM2 (ENSSSCG00000031837)	ENSSSCG00000035857	CKLF (ENSSSCG00000031161)	TK2 (ENSSSCG00000038053)	BEAN1 (ENSSSCG00000033191)	CDH5 (ENSSSCG00000035772)	CDH11 (ENSSSCG00000002795)	CDH8 (ENSSSCG00000040687)	ENSSSCG00000044968	ENSSSCG00000037660	GOT2 (ENSSSCG00000032985) ##22	SLC38A7 (ENSSSCG00000040881)	CNOT1 (ENSSSCG00000002799)	SETD6 (ENSSSCG00000026505)	NDRG4 (ENSSSCG00000021911)	GINS3 (ENSSSCG00000002802)	PRSS54 (ENSSSCG00000028587)	CCDC113 (ENSSSCG00000002803)	CSNK2A2 (ENSSSCG00000002804)	CFAP20 (ENSSSCG00000002805)	MMP15 (ENSSSCG00000002806)	USB1 (ENSSSCG00000002807)	ZNF319 (ENSSSCG00000002808)	TEPP (ENSSSCG00000002809)	ENSSSCG00000063486	ENSSSCG00000002811
Chacoan peccary	MODERN SPECIES	106	CA7 (ENSCWAG00000019754)	NAE1 (ENSCWAG00000019642)	TERB1 (ENSCWAG00000019565)	DYNC1LI2 (ENSCWAG00000019474)	CMTM4 (ENSCWAG00000019389)	CMTM3 (ENSCWAG00000019334)	CMTM2 (ENSCWAG00000019269)	ENSCWAG00000019243	CKLF (ENSCWAG00000019069)	TK2 (ENSCWAG00000018712)	BEAN1 (ENSCWAG00000018659)	CDH5 (ENSCWAG00000018573)	CDH11 (ENSCWAG00000018480)	CDH8 (ENSCWAG00000018352)	ENSCWAG00000018318	GOT2 (ENSCWAG00000018278) ##22	SLC38A7 (ENSCWAG00000018214)	CNOT1 (ENSCWAG00000017878)	SETD6 (ENSCWAG00000017806)	NDRG4 (ENSCWAG00000017544)	GINS3 (ENSCWAG00000017517)	ENSCWAG00000017470	CCDC113 (ENSCWAG00000017246)	CSNK2A2 (ENSCWAG00000017172)	CFAP20 (ENSCWAG00000017133)	MMP15 (ENSCWAG00000017098)	USB1 (ENSCWAG00000017031)	ZNF319 (ENSCWAG00000017017)	TEPP (ENSCWAG00000016971)	CNGB1 (ENSCWAG00000016783)	KIFC3 (ENSCWAG00000016304)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Alpaca	MODERN SPECIES	214																GOT2 (ENSVPAG00000010840) ##22
Arabian camel	MODERN SPECIES	35	TERB1 (ENSCDRG00005006615)	DYNC1LI2 (ENSCDRG00005006446)	CMTM4 (ENSCDRG00005006365)	ENSCDRG00005006295	ENSCDRG00005006191	ENSCDRG00005006173	CKLF (ENSCDRG00005005979)	TK2 (ENSCDRG00005005648)	ENSCDRG00005005615	BEAN1 (ENSCDRG00005005591)	CDH5 (ENSCDRG00005005572)	CDH11 (ENSCDRG00005006677)	ENSCDRG00005006642	CDH8 (ENSCDRG00005006529)	ENSCDRG00005006488	GOT2 (ENSCDRG00005006402) ##22	SLC38A7 (ENSCDRG00005006327)	CNOT1 (ENSCDRG00005006002)	SETD6 (ENSCDRG00005005936)	NDRG4 (ENSCDRG00005005703)	GINS3 (ENSCDRG00005005673)	PRSS54 (ENSCDRG00005005634)	CCDC113 (ENSCDRG00005005577)	CSNK2A2 (ENSCDRG00005005512)	ENSCDRG00005005490	CFAP20 (ENSCDRG00005005469)	MMP15 (ENSCDRG00005005433)	USB1 (ENSCDRG00005005350)	ZNF319 (ENSCDRG00005005311)	TEPP (ENSCDRG00005005268)	ENSCDRG00005005222
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Pecora	ANCESTRAL SPECIES	4	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.e	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Yarkand deer	MODERN SPECIES	27	CMTM3 (ENSCHYG00000020938)	CMTM2 (ENSCHYG00000020882)	ENSCHYG00000020818	CKLF (ENSCHYG00000020361)	TK2 (ENSCHYG00000019962)	ENSCHYG00000019922	BEAN1 (ENSCHYG00000019755)	ENSCHYG00000019729	CDH5 (ENSCHYG00000019613)	ENSCHYG00000019586	ENSCHYG00000019579	CDH11 (ENSCHYG00000019391)	ENSCHYG00000019334	CDH8 (ENSCHYG00000019108)	ENSCHYG00000019011	GOT2 (ENSCHYG00000018669) ##22	SLC38A7 (ENSCHYG00000018490)	CNOT1 (ENSCHYG00000017540)	SETD6 (ENSCHYG00000017261)	NDRG4 (ENSCHYG00000016352)	GINS3 (ENSCHYG00000016256)	ENSCHYG00000016174	CCDC113 (ENSCHYG00000015946)	CSNK2A2 (ENSCHYG00000015792)	CFAP20 (ENSCHYG00000015699)	MMP15 (ENSCHYG00000015474)	USB1 (ENSCHYG00000015143)	ZNF319 (ENSCHYG00000015065)	TEPP (ENSCHYG00000014959)	ENSCHYG00000014815	ENSCHYG00000014612
Percora_a	ANCESTRAL SPECIES	4	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.e	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00570000079722
Bovidae	ANCESTRAL SPECIES	4	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.e	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00570000079722
Bovinae	ANCESTRAL SPECIES	3	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.e	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Bos	ANCESTRAL SPECIES	4	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.e	ENSGT00940000163203.f	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Bos_a	ANCESTRAL SPECIES	22	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.e	ENSGT00940000163203.f	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Domestic yak	MODERN SPECIES	12	DYNC1LI2 (ENSBGRG00000026908)	CMTM4 (ENSBGRG00000026912)	CMTM3 (ENSBGRG00000026915)	CMTM2 (ENSBGRG00000026918)	ENSBGRG00000026920	ENSBGRG00000026921	CKLF (ENSBGRG00000026922)	TK2 (ENSBGRG00000026924)	ENSBGRG00000026925	BEAN1 (ENSBGRG00000026926)	CDH5 (ENSBGRG00000011034)	ENSBGRG00000011140	CDH11 (ENSBGRG00000011195)	ENSBGRG00000011367	CDH8 (ENSBGRG00000011425)	GOT2 (ENSBGRG00000011706) ##22	ENSBGRG00000011994	SLC38A7 (ENSBGRG00000012057)	CNOT1 (ENSBGRG00000012216)	SETD6 (ENSBGRG00000013064)	NDRG4 (ENSBGRG00000013280)	GINS3 (ENSBGRG00000014032)	PRSS54 (ENSBGRG00000014095)	CCDC113 (ENSBGRG00000014166)	CSNK2A2 (ENSBGRG00000014395)	CFAP20 (ENSBGRG00000014585)	MMP15 (ENSBGRG00000014725)	ENSBGRG00000014806	ZNF319 (ENSBGRG00000015086)	TEPP (ENSBGRG00000015142)	CNGB1 (ENSBGRG00000015472)
Wild yak	MODERN SPECIES	1140															ENSBMUG00000002378	GOT2 (ENSBMUG00000002359) ##22	SLC38A7 (ENSBMUG00000002302)	CNOT1 (ENSBMUG00000002146)	SETD6 (ENSBMUG00000002024)	NDRG4 (ENSBMUG00000001926)	GINS3 (ENSBMUG00000001753)	ENSBMUG00000001721	CCDC113 (ENSBMUG00000001710)	CSNK2A2 (ENSBMUG00000001654)	CFAP20 (ENSBMUG00000001635)	MMP15 (ENSBMUG00000001617)	USB1 (ENSBMUG00000001576)	ZNF319 (ENSBMUG00000001536)	TEPP (ENSBMUG00000001493)	ENSBMUG00000001398	ENSBMUG00000001368
Bos_b	ANCESTRAL SPECIES		ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.e	ENSGT00940000163203.f	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00390000014038.c.f.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Hybrid Bos Indicus	MODERN SPECIES	9	DYNC1LI2 (ENSBIXG00005020114)	ENSBIXG00005019997	CMTM3 (ENSBIXG00005019988)	CMTM2 (ENSBIXG00005003252)	ENSBIXG00005019867	ENSBIXG00005019855	CKLF (ENSBIXG00005005529)	ENSBIXG00005003209	TK2 (ENSBIXG00005019627)	ENSBIXG00005019510	BEAN1 (ENSBIXG00005003174)	CDH5 (ENSBIXG00005019465)	CDH11 (ENSBIXG00005019384)	CDH8 (ENSBIXG00005019363)	ENSBIXG00005019309	GOT2 (ENSBIXG00005005444) ##22	ENSBIXG00005019248	SLC38A7 (ENSBIXG00005019230)	CNOT1 (ENSBIXG00005005439)	SETD6 (ENSBIXG00005019038)	NDRG4 (ENSBIXG00005003090)	GINS3 (ENSBIXG00005003043)	PRSS54 (ENSBIXG00005007663)	CCDC113 (ENSBIXG00005006873)	CSNK2A2 (ENSBIXG00005007659)	CFAP20 (ENSBIXG00005003006)	MMP15 (ENSBIXG00005018526)	USB1 (ENSBIXG00005002993)	ZNF319 (ENSBIXG00005018465)	TEPP (ENSBIXG00005018441)	ENSBIXG00005018324
Cow	MODERN SPECIES	9	DYNC1LI2 (ENSBTAG00000000458)	CMTM4 (ENSBTAG00000001104)	CMTM3 (ENSBTAG00000054188)	CMTM2 (ENSBTAG00000032576)	ENSBTAG00000054627	ENSBTAG00000054171	CKLF (ENSBTAG00000038858)	ENSBTAG00000049507	TK2 (ENSBTAG00000005152)	BEAN1 (ENSBTAG00000009762)	CDH5 (ENSBTAG00000007421)	CDH11 (ENSBTAG00000032092)	CDH8 (ENSBTAG00000022783)	ENSBTAG00000050240	ENSBTAG00000051834	GOT2 (ENSBTAG00000007172) ##22	SLC38A7 (ENSBTAG00000007170)	CNOT1 (ENSBTAG00000020782)	SETD6 (ENSBTAG00000020781)	NDRG4 (ENSBTAG00000003894)	GINS3 (ENSBTAG00000009363)	PRSS54 (ENSBTAG00000014147)	CCDC113 (ENSBTAG00000014144)	CSNK2A2 (ENSBTAG00000013784)	CFAP20 (ENSBTAG00000013874)	MMP15 (ENSBTAG00000012919)	USB1 (ENSBTAG00000015758)	ZNF319 (ENSBTAG00000045572)	TEPP (ENSBTAG00000012785)	CNGB1 (ENSBTAG00000005702)	KIFC3 (ENSBTAG00000007181)
American bison	MODERN SPECIES	3332	RFX6 (ENSBBBG00000009832)	FAM162B (ENSBBBG00000009824)	KPNA5 (ENSBBBG00000009821)	ZUP1 (ENSBBBG00000009809)	RSPH4A (ENSBBBG00000009798)	ENSBBBG00000009781	CALHM4 (ENSBBBG00000009776)	TRAPPC3L (ENSBBBG00000009772)	CALHM5 (ENSBBBG00000001616)	ENSBBBG00000009766	DSE (ENSBBBG00000009038)	ENSBBBG00000009757	TSPYL4 (ENSBBBG00000009756)	NT5DC1 (ENSBBBG00000009754)	COL10A1 (ENSBBBG00000009745)	GOT2 (ENSBBBG00000009736) ##22	SLC38A7 (ENSBBBG00000009730)	CNOT1 (ENSBBBG00000009711)	SETD6 (ENSBBBG00000009667)	NDRG4 (ENSBBBG00000009621)	GINS3 (ENSBBBG00000009512)	ENSBBBG00000009506	CCDC113 (ENSBBBG00000001521)	CSNK2A2 (ENSBBBG00000009499)	CFAP20 (ENSBBBG00000009492)	MMP15 (ENSBBBG00000009486)	USB1 (ENSBBBG00000001519)	ZNF319 (ENSBBBG00000009474)	TEPP (ENSBBBG00000009471)	ENSBBBG00000009442	KIFC3 (ENSBBBG00000009403)
Caprinae	ANCESTRAL SPECIES	4	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.e	ENSGT00940000162264	ENSGT00940000158005	ENSGT00980000202834	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
Goat	MODERN SPECIES	9	NAE1 (ENSCHIG00000009134)	TERB1 (ENSCHIG00000026054)	DYNC1LI2 (ENSCHIG00000014435)	CMTM4 (ENSCHIG00000021995)	CMTM3 (ENSCHIG00000019372)	CMTM2 (ENSCHIG00000025225)	CKLF (ENSCHIG00000023696)	TK2 (ENSCHIG00000025188)	BEAN1 (ENSCHIG00000002056)	CDH5 (ENSCHIG00000015547)	CDH11 (ENSCHIG00000010210)	ENSCHIG00000020417	CDH8 (ENSCHIG00000018270)	ENSCHIG00000026705	ENSCHIG00000026581	GOT2 (ENSCHIG00000013261) ##22	SLC38A7 (ENSCHIG00000016964)	CNOT1 (ENSCHIG00000010452)	SETD6 (ENSCHIG00000008456)	NDRG4 (ENSCHIG00000021788)	GINS3 (ENSCHIG00000021374)	ENSCHIG00000014107	CCDC113 (ENSCHIG00000014723)	CSNK2A2 (ENSCHIG00000020806)	CFAP20 (ENSCHIG00000025631)	MMP15 (ENSCHIG00000002832)	USB1 (ENSCHIG00000024290)	ZNF319 (ENSCHIG00000003371)	TEPP (ENSCHIG00000008699)	ENSCHIG00000016478	ENSCHIG00000016930
Rambouillet Sheep	MODERN SPECIES	5	DYNC1LI2 (ENSOARG00020016257)	ENSOARG00020016184	CMTM4 (ENSOARG00020016101)	CMTM3 (ENSOARG00020016016)	CMTM2 (ENSOARG00020015951)	ENSOARG00020015819	CKLF (ENSOARG00020015354)	TK2 (ENSOARG00020014347)	ENSOARG00020014298	BEAN1 (ENSOARG00020014207)	CDH5 (ENSOARG00020014091)	ENSOARG00020014043	CDH11 (ENSOARG00020013936)	CDH8 (ENSOARG00020013404)	ENSOARG00020013297	GOT2 (ENSOARG00020013006) ##22	SLC38A7 (ENSOARG00020012797)	CNOT1 (ENSOARG00020012509)	SETD6 (ENSOARG00020012450)	NDRG4 (ENSOARG00020009033)	GINS3 (ENSOARG00020008931)	ENSOARG00020008864	CCDC113 (ENSOARG00020008747)	CSNK2A2 (ENSOARG00020008664)	CFAP20 (ENSOARG00020008641)	MMP15 (ENSOARG00020008563)	USB1 (ENSOARG00020008448)	ZNF319 (ENSOARG00020008426)	TEPP (ENSOARG00020008375)	ENSOARG00020005250	KIFC3 (ENSOARG00020004375)
Siberian musk deer	MODERN SPECIES	125	PDP2 (ENSMMSG00000003451)	CA7 (ENSMMSG00000003460)	NAE1 (ENSMMSG00000003506)	TERB1 (ENSMMSG00000003643)	DYNC1LI2 (ENSMMSG00000003693)	CMTM4 (ENSMMSG00000003747)	CMTM3 (ENSMMSG00000003767)	ENSMMSG00000003792	ENSMMSG00000003808	CKLF (ENSMMSG00000003823)	TK2 (ENSMMSG00000003859)	BEAN1 (ENSMMSG00000003905)	CDH5 (ENSMMSG00000003914)	CDH11 (ENSMMSG00000003928)	CDH8 (ENSMMSG00000003956)	GOT2 (ENSMMSG00000004027) ##22	SLC38A7 (ENSMMSG00000004061)	CNOT1 (ENSMMSG00000004096)	SETD6 (ENSMMSG00000004139)	NDRG4 (ENSMMSG00000004157)	GINS3 (ENSMMSG00000004215)	ENSMMSG00000004229	CCDC113 (ENSMMSG00000004244)	ENSMMSG00000004269	CFAP20 (ENSMMSG00000004297)	MMP15 (ENSMMSG00000004309)	USB1 (ENSMMSG00000004327)	ZNF319 (ENSMMSG00000004384)	TEPP (ENSMMSG00000004406)	ENSMMSG00000004444	ENSMMSG00000004485
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT01090000260388	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00390000011085.tb	ENSGT00940000155052.e.b.b	ENSGT00390000009320.ab.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00390000002684
Blue whale	MODERN SPECIES	10	ENSBMSG00010015037	CKLF (ENSBMSG00010014882)	TK2 (ENSBMSG00010014551)	ENSBMSG00010014500	BEAN1 (ENSBMSG00010014457)	CDH5 (ENSBMSG00010014359)	ENSBMSG00010014330	CDH11 (ENSBMSG00010014302)	ENSBMSG00010014287	ENSBMSG00010020885	ENSBMSG00010020871	CDH8 (ENSBMSG00010020823)	ENSBMSG00010020800	ENSBMSG00010020788	ENSBMSG00010020781	GOT2 (ENSBMSG00010020757) ##22	SLC38A7 (ENSBMSG00010020730)	ENSBMSG00010020718	CNOT1 (ENSBMSG00010020670)	SETD6 (ENSBMSG00010020609)	NDRG4 (ENSBMSG00010020516)	GINS3 (ENSBMSG00010020462)	ENSBMSG00010020438	PRSS54 (ENSBMSG00010020412)	CCDC113 (ENSBMSG00010020393)	CSNK2A2 (ENSBMSG00010020354)	CFAP20 (ENSBMSG00010020328)	MMP15 (ENSBMSG00010020294)	USB1 (ENSBMSG00010020222)	ZNF319 (ENSBMSG00010020200)	ENSBMSG00010020175
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00390000011085.tb	ENSGT00940000155052.e.b.b.b	ENSGT00390000009320.ab.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00390000002684
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES		ENSPCTG00005000010	ENSPCTG00005000011	ENSPCTG00005000012	ENSPCTG00005000013	ENSPCTG00005000014	ENSPCTG00005000015	ENSPCTG00005000016	ENSPCTG00005000017	ENSPCTG00005000018	ENSPCTG00005000019	ENSPCTG00005000020	ENSPCTG00005000021	ENSPCTG00005000022	ENSPCTG00005000023	ENSPCTG00005000024	ENSPCTG00005000025 ##22	ENSPCTG00005000026	ENSPCTG00005000027	ENSPCTG00005000028	ENSPCTG00005000029	ENSPCTG00005000030	ENSPCTG00005000031	ENSPCTG00005000032	ENSPCTG00005000033	ENSPCTG00005000034	ENSPCTG00005000035	ENSPCTG00005000036	ENSPCTG00005000037	ENSPCTG00005000038	ENSPCTG00005000039	ENSPCTG00005000040
Sperm whale	MODERN SPECIES	8	CMTM4 (ENSPCTG00005009939)	CMTM3 (ENSPCTG00005009785)	ENSPCTG00005009667	ENSPCTG00005009597	CKLF (ENSPCTG00005009361)	ENSPCTG00005009313	BEAN1 (ENSPCTG00005009188)	ENSPCTG00005009128	CDH11 (ENSPCTG00005009072)	ENSPCTG00005008963	ENSPCTG00005021732	ENSPCTG00005021725	CDH8 (ENSPCTG00005021589)	ENSPCTG00005021567	ENSPCTG00005021558	GOT2 (ENSPCTG00005021536) ##22	SLC38A7 (ENSPCTG00005021492)	CNOT1 (ENSPCTG00005021083)	SETD6 (ENSPCTG00005020969)	NDRG4 (ENSPCTG00005020325)	GINS3 (ENSPCTG00005020207)	ENSPCTG00005020160	CCDC113 (ENSPCTG00005019934)	CSNK2A2 (ENSPCTG00005019830)	CFAP20 (ENSPCTG00005019778)	MMP15 (ENSPCTG00005019749)	USB1 (ENSPCTG00005019589)	ZNF319 (ENSPCTG00005019566)	TEPP (ENSPCTG00005019479)	ENSPCTG00005019357	CNGB1 (ENSPCTG00005019186)
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000187478	ENSGT00940000155052.e.b.b.b	ENSGT00390000009320.ab.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
Dolphin	MODERN SPECIES	3190																GOT2 (ENSTTRG00000009938) ##22	SLC38A7 (ENSTTRG00000009931)
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000187478	ENSGT00940000155052.e.b.b.b	ENSGT00390000009320.ab.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00390000011085.sb.a.a.b	ENSGT00940000155052.e.b.b.b.c	ENSGT00390000009320.ab.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
Narwhal	MODERN SPECIES	296	ENSMMNG00015003846	ENSMMNG00015003867	CKLF (ENSMMNG00015003920)	TK2 (ENSMMNG00015003990)	ENSMMNG00015004024	BEAN1 (ENSMMNG00015004035)	CDH5 (ENSMMNG00015004064)	ENSMMNG00015004090	ENSMMNG00015004100	CDH11 (ENSMMNG00015004113)	CDH8 (ENSMMNG00015005499)	ENSMMNG00015005510	ENSMMNG00015005531	ENSMMNG00015005539	ENSMMNG00015005555	GOT2 (ENSMMNG00015005652) ##22	SLC38A7 (ENSMMNG00015005696)	CNOT1 (ENSMMNG00015005778)	SETD6 (ENSMMNG00015005864)	NDRG4 (ENSMMNG00015005938)	GINS3 (ENSMMNG00015006063)	ENSMMNG00015006086	CCDC113 (ENSMMNG00015006096)	CSNK2A2 (ENSMMNG00015006120)	CFAP20 (ENSMMNG00015006150)	MMP15 (ENSMMNG00015006168)	USB1 (ENSMMNG00015006199)	ZNF319 (ENSMMNG00015006224)	TEPP (ENSMMNG00015006245)	ENSMMNG00015006536	KIFC3 (ENSMMNG00015007057)
Beluga whale	MODERN SPECIES	3										CDH11 (ENSDLEG00000020942)	ENSDLEG00000020905	CDH8 (ENSDLEG00000020892)	ENSDLEG00000020879	ENSDLEG00000020864	ENSDLEG00000020856	GOT2 (ENSDLEG00000020846) ##22	ENSDLEG00000020843	CNOT1 (ENSDLEG00000017671)	SETD6 (ENSDLEG00000017026)	NDRG4 (ENSDLEG00000016042)	GINS3 (ENSDLEG00000015953)	PRSS54 (ENSDLEG00000015935)	CCDC113 (ENSDLEG00000015914)	CSNK2A2 (ENSDLEG00000015891)	CFAP20 (ENSDLEG00000015870)	MMP15 (ENSDLEG00000015773)	USB1 (ENSDLEG00000015715)	ZNF319 (ENSDLEG00000015704)	TEPP (ENSDLEG00000015670)	ENSDLEG00000014085	KIFC3 (ENSDLEG00000013857)
Vaquita	MODERN SPECIES	10	DYNC1LI2 (ENSPSNG00000015820)	CMTM4 (ENSPSNG00000015603)	CMTM3 (ENSPSNG00000015485)	ENSPSNG00000015268	ENSPSNG00000015231	ENSPSNG00000015162	CKLF (ENSPSNG00000014869)	TK2 (ENSPSNG00000014283)	BEAN1 (ENSPSNG00000014181)	CDH5 (ENSPSNG00000013935)	ENSPSNG00000013878	CDH11 (ENSPSNG00000013791)	ENSPSNG00000013709	CDH8 (ENSPSNG00000013348)	ENSPSNG00000013268	GOT2 (ENSPSNG00000013169) ##22	SLC38A7 (ENSPSNG00000013079)	CNOT1 (ENSPSNG00000022274)	SETD6 (ENSPSNG00000022258)	NDRG4 (ENSPSNG00000022228)	GINS3 (ENSPSNG00000022183)	ENSPSNG00000022173	CCDC113 (ENSPSNG00000022158)	CSNK2A2 (ENSPSNG00000022145)	CFAP20 (ENSPSNG00000022135)	MMP15 (ENSPSNG00000022123)	USB1 (ENSPSNG00000022103)	TEPP (ENSPSNG00000022075)	ZNF319 (ENSPSNG00000022059)	ENSPSNG00000022031	KIFC3 (ENSPSNG00000021762)
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00980000202834	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Caniformia	ANCESTRAL SPECIES	1	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00570000079722
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a.h.b.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Ursus	ANCESTRAL SPECIES	26														ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a.h.b.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Polar bear	MODERN SPECIES	246														ENSUMAG00000021141	CDH8 (ENSUMAG00000021166)	GOT2 (ENSUMAG00000021265) ##22	SLC38A7 (ENSUMAG00000021276)	CNOT1 (ENSUMAG00000021291)	SETD6 (ENSUMAG00000021301)	NDRG4 (ENSUMAG00000021334)	ENSUMAG00000021342	GINS3 (ENSUMAG00000021344)	PRSS54 (ENSUMAG00000021346)	CCDC113 (ENSUMAG00000021357)	CSNK2A2 (ENSUMAG00000021361)	CFAP20 (ENSUMAG00000021364)	MMP15 (ENSUMAG00000021366)	USB1 (ENSUMAG00000021369)	TEPP (ENSUMAG00000021374)	ENSUMAG00000021379	ENSUMAG00000021385
American black bear	MODERN SPECIES	2372														ENSUAMG00000009263	ENSUAMG00000009261	GOT2 (ENSUAMG00000009259) ##22	SLC38A7 (ENSUAMG00000009256)	CNOT1 (ENSUAMG00000009251)	SETD6 (ENSUAMG00000009247)	NDRG4 (ENSUAMG00000009242)
Giant Panda	MODERN SPECIES	3	CA7 (ENSAMEG00000017119)	NAE1 (ENSAMEG00000017095)	TERB1 (ENSAMEG00000017093)	DYNC1LI2 (ENSAMEG00000017056)	CMTM4 (ENSAMEG00000017049)	ENSAMEG00000017042	ENSAMEG00000017039	ENSAMEG00000017010	CKLF (ENSAMEG00000017037)	TK2 (ENSAMEG00000017012)	BEAN1 (ENSAMEG00000017005)	CDH5 (ENSAMEG00000016973)	CDH11 (ENSAMEG00000001479)	CDH8 (ENSAMEG00000016717)	ENSAMEG00000026983	GOT2 (ENSAMEG00000017346) ##22	SLC38A7 (ENSAMEG00000017337)	CNOT1 (ENSAMEG00000017298)	SETD6 (ENSAMEG00000017290)	ENSAMEG00000017262	GINS3 (ENSAMEG00000028403)	ENSAMEG00000029388	CCDC113 (ENSAMEG00000017237)	CSNK2A2 (ENSAMEG00000025254)	CFAP20 (ENSAMEG00000017228)	MMP15 (ENSAMEG00000017214)	USB1 (ENSAMEG00000017205)	TEPP (ENSAMEG00000017192)	ENSAMEG00000017173	KIFC3 (ENSAMEG00000017150)	KATNB1 (ENSAMEG00000017110)
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000182901.a.a.b.b.a.a.d.r	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
American mink	MODERN SPECIES	2	TERB1 (ENSNVIG00000011040)	DYNC1LI2 (ENSNVIG00000011086)	CMTM4 (ENSNVIG00000011144)	CMTM3 (ENSNVIG00000011166)	ENSNVIG00000011246	ENSNVIG00000011266	CKLF (ENSNVIG00000011277)	TK2 (ENSNVIG00000011338)	BEAN1 (ENSNVIG00000011640)	CDH5 (ENSNVIG00000011716)	CDH11 (ENSNVIG00000011851)	ENSNVIG00000011915	CDH8 (ENSNVIG00000011986)	ENSNVIG00000012151	ENSNVIG00000012255	GOT2 (ENSNVIG00000012297) ##22	S38A7 (ENSNVIG00000012380)	CNOT1 (ENSNVIG00000012524)	SETD6 (ENSNVIG00000013007)	NDRG4 (ENSNVIG00000013270)	GINS3 (ENSNVIG00000013997)	ENSNVIG00000014022	CCDC113 (ENSNVIG00000014075)	CSNK2A2 (ENSNVIG00000014190)	CP080 (ENSNVIG00000014263)	MMP15 (ENSNVIG00000014370)	USB1 (ENSNVIG00000014435)	ZNF319 (ENSNVIG00000014526)	TEPP (ENSNVIG00000014537)	ENSNVIG00000014701	KIFC3 (ENSNVIG00000014809)
Ferret	DUPLICATION
Ferret	DUPLICATION
Ferret	MODERN SPECIES	588															ENSMPUG00000013052	ENSMPUG00000013057 ##22	ARMCX5 (ENSMPUG00000019690)	GPRASP1 (ENSMPUG00000013064)	GPRASP2 (ENSMPUG00000019691)	ENSMPUG00000019692
Ferret	MODERN SPECIES	165											AMPH (ENSMPUG00000018129)	ENSMPUG00000018130	VPS41 (ENSMPUG00000018131)	POU6F2 (ENSMPUG00000018132)	YAE1 (ENSMPUG00000018133)	ENSMPUG00000018134 ##22	RALA (ENSMPUG00000018135)	ENSMPUG00000018136	CDK13 (ENSMPUG00000018137)	MPLKIP (ENSMPUG00000018138)	SUGCT (ENSMPUG00000018139)	ENSMPUG00000018140	ENSMPUG00000018141	INHBA (ENSMPUG00000018142)	GLI3 (ENSMPUG00000018143)	C7orf25 (ENSMPUG00000018144)	PSMA2 (ENSMPUG00000018145)	ENSMPUG00000018146	ENSMPUG00000018147	STK17A (ENSMPUG00000018148)	COA1 (ENSMPUG00000018149)
Ferret	MODERN SPECIES	174	NAE1 (ENSMPUG00000005264)	DYNC1LI2 (ENSMPUG00000005134)	CMTM4 (ENSMPUG00000005117)	CMTM3 (ENSMPUG00000005060)	CMTM2 (ENSMPUG00000005048)	ENSMPUG00000005046	CKLF (ENSMPUG00000005042)	TK2 (ENSMPUG00000004932)	BEAN1 (ENSMPUG00000004927)	CDH5 (ENSMPUG00000004913)	CDH11 (ENSMPUG00000004907)	ENSMPUG00000004902	CDH8 (ENSMPUG00000004894)	RPS15 (ENSMPUG00000004876)	ENSMPUG00000019889	ENSMPUG00000004862 ##22	SLC38A7 (ENSMPUG00000004853)	CNOT1 (ENSMPUG00000004830)	SETD6 (ENSMPUG00000004820)	NDRG4 (ENSMPUG00000004811)	GINS3 (ENSMPUG00000004806)	PRSS54 (ENSMPUG00000004805)	CCDC113 (ENSMPUG00000004801)	CSNK2A2 (ENSMPUG00000004713)	CFAP20 (ENSMPUG00000004704)	MMP15 (ENSMPUG00000004693)	USB1 (ENSMPUG00000004684)	ZNF319 (ENSMPUG00000004675)	TEPP (ENSMPUG00000004667)	ENSMPUG00000004646	KIFC3 (ENSMPUG00000004627)
Canidae	ANCESTRAL SPECIES	14																ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00940000154022.a.a
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00940000157105	ENSGT00390000017024	ENSGT00390000004161	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT01090000260046.e.b.b.a.b.a.a.b.b.b.b.b.a.a.a.b.a.b	ENSGT00510000048902.a	ENSGT01090000260006.D.a.a.d.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00940000154022.a.a
Dingo	MODERN SPECIES	41	ENSCAFG00020017240	ANKRA2 (ENSCAFG00020017236)	UTP15 (ENSCAFG00020017037)	ARHGEF28 (ENSCAFG00020017020)	ENC1 (ENSCAFG00020017016)	HEXB (ENSCAFG00020017013)	ENSCAFG00020017010	GFM2 (ENSCAFG00020016998)	ENSCAFG00020016993	ENSCAFG00020016991	FAM169A (ENSCAFG00020016982)	ENSCAFG00020016980	ENSCAFG00020016979	ENSCAFG00020016976	ENSCAFG00020016970	GOT2 (ENSCAFG00020016964) ##22	SLC38A7 (ENSCAFG00020016917)	CNOT1 (ENSCAFG00020010156)	SETD6 (ENSCAFG00020010005)	ENSCAFG00020009989	ENSCAFG00020009986	PRSS54 (ENSCAFG00020009957)	CCDC113 (ENSCAFG00020009951)	CSNK2A2 (ENSCAFG00020009302)	CFAP20 (ENSCAFG00020009286)	MMP15 (ENSCAFG00020009269)	USB1 (ENSCAFG00020009263)	ZNF319 (ENSCAFG00020009237)	ENSCAFG00020009212	CNGB1 (ENSCAFG00020009200)	KIFC3 (ENSCAFG00020008850)
Dog	MODERN SPECIES	11	RPS24 (ENSCAFG00845000696)	ENSCAFG00845000702	BTF3 (ENSCAFG00845000717)	ANKRA2 (ENSCAFG00845000743)	UTP15 (ENSCAFG00845000802)	ARHGEF28 (ENSCAFG00845000901)	ENC1 (ENSCAFG00845001141)	HEXB (ENSCAFG00845001153)	GFM2 (ENSCAFG00845001226)	NSA2 (ENSCAFG00845001270)	ENSCAFG00845001288	FAM169A (ENSCAFG00845001306)	ENSCAFG00845001362	OR6C6J (ENSCAFG00845001374)	ENSCAFG00845001398	GOT2 (ENSCAFG00845001418) ##22	SLC38A7 (ENSCAFG00845001448)	CNOT1 (ENSCAFG00845001575)	SETD6 (ENSCAFG00845001902)	NDRG4 (ENSCAFG00845002044)	PRSS54 (ENSCAFG00845002196)	GINS3 (ENSCAFG00845002220)	CCDC113 (ENSCAFG00845002256)	CSNK2A2 (ENSCAFG00845002309)	CFAP20 (ENSCAFG00845002358)	MMP15 (ENSCAFG00845002380)	USB1 (ENSCAFG00845002434)	ZNF319 (ENSCAFG00845002486)	TEPP (ENSCAFG00845002495)	CNGB1 (ENSCAFG00845002559)	KIFC3 (ENSCAFG00845002649)
Red fox	MODERN SPECIES	87																GOT2 (ENSVVUG00000027097) ##22	SLC38A7 (ENSVVUG00000027091)	CNOT1 (ENSVVUG00000024037)	SETD6 (ENSVVUG00000023832)	NDRG4 (ENSVVUG00000023743)	GINS3 (ENSVVUG00000023731)	PRSS54 (ENSVVUG00000023729)	CCDC113 (ENSVVUG00000023728)	CSNK2A2 (ENSVVUG00000023723)	CFAP20 (ENSVVUG00000023720)	MMP15 (ENSVVUG00000023712)	USB1 (ENSVVUG00000023700)	ZNF319 (ENSVVUG00000023697)	TEPP (ENSVVUG00000023696)	CNGB1 (ENSVVUG00000023693)	KIFC3 (ENSVVUG00000023671)
Felidae	ANCESTRAL SPECIES	7	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00980000202834	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Panthera	ANCESTRAL SPECIES	10	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00940000163092.c	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Tiger	MODERN SPECIES	320	NAE1 (ENSPTIG00000018443)	TERB1 (ENSPTIG00000018200)	DYNC1LI2 (ENSPTIG00000017737)	CMTM4 (ENSPTIG00000017425)	ENSPTIG00000017394	CMTM2 (ENSPTIG00000017331)	CKLF (ENSPTIG00000017049)	TK2 (ENSPTIG00000016239)	ENSPTIG00000016124	CDH5 (ENSPTIG00000015927)	CDH11 (ENSPTIG00000015577)	CDH8 (ENSPTIG00000015093)	ENSPTIG00000006026	ENSPTIG00000006015	ENSPTIG00000014768	GOT2 (ENSPTIG00000014554) ##22	SLC38A7 (ENSPTIG00000013817)	CNOT1 (ENSPTIG00000012589)	SETD6 (ENSPTIG00000012197)	NDRG4 (ENSPTIG00000011263)	GINS3 (ENSPTIG00000010688)	PRSS54 (ENSPTIG00000010343)	CCDC113 (ENSPTIG00000009933)	CSNK2A2 (ENSPTIG00000009043)	CFAP20 (ENSPTIG00000008900)	MMP15 (ENSPTIG00000008565)	USB1 (ENSPTIG00000007506)	TEPP (ENSPTIG00000006904)	ENSPTIG00000020933	KIFC3 (ENSPTIG00000019840)	KATNB1 (ENSPTIG00000018868)
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00940000163092.c	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
leopard	MODERN SPECIES	28	CA7 (ENSPPRG00000005536)	NAE1 (ENSPPRG00000005214)	TERB1 (ENSPPRG00000003366)	DYNC1LI2 (ENSPPRG00000001766)	CMTM4 (ENSPPRG00000000628)	CMTM3 (ENSPPRG00000000068)	CMTM2 (ENSPPRG00000023855)	CKLF (ENSPPRG00000022221)	TK2 (ENSPPRG00000016580)	BEAN1 (ENSPPRG00000012066)	CDH5 (ENSPPRG00000011703)	CDH11 (ENSPPRG00000010969)	CDH8 (ENSPPRG00000009615)	ENSPPRG00000009224	ENSPPRG00000009097	GOT2 (ENSPPRG00000006400) ##22	ENSPPRG00000005983	SLC38A7 (ENSPPRG00000005811)	CNOT1 (ENSPPRG00000004867)	SETD6 (ENSPPRG00000002961)	NDRG4 (ENSPPRG00000001537)	GINS3 (ENSPPRG00000023336)	PRSS54 (ENSPPRG00000023521)	CCDC113 (ENSPPRG00000023650)	CSNK2A2 (ENSPPRG00000023807)	CFAP20 (ENSPPRG00000024682)	MMP15 (ENSPPRG00000024709)	USB1 (ENSPPRG00000024797)	ZNF319 (ENSPPRG00000015444)	TEPP (ENSPPRG00000021075)	ENSPPRG00000019036
lion	MODERN SPECIES	15	ENSPLOG00000011501	CKLF (ENSPLOG00000011254)	TK2 (ENSPLOG00000016167)	ENSPLOG00000016105	ENSPLOG00000016090	BEAN1 (ENSPLOG00000016041)	CDH5 (ENSPLOG00000015993)	CDH11 (ENSPLOG00000015823)	ENSPLOG00000015793	CDH8 (ENSPLOG00000015522)	ENSPLOG00000015462	ENSPLOG00000015447	ENSPLOG00000015429	ENSPLOG00000015410	ENSPLOG00000015374	GOT2 (ENSPLOG00000015162) ##22	SLC38A7 (ENSPLOG00000014987)	CNOT1 (ENSPLOG00000014526)	SETD6 (ENSPLOG00000014319)	NDRG4 (ENSPLOG00000013343)	GINS3 (ENSPLOG00000013168)	ENSPLOG00000013054	CCDC113 (ENSPLOG00000012766)	CSNK2A2 (ENSPLOG00000012711)	CFAP20 (ENSPLOG00000012677)	MMP15 (ENSPLOG00000012566)	USB1 (ENSPLOG00000012465)	ZNF319 (ENSPLOG00000012434)	TEPP (ENSPLOG00000012337)	ENSPLOG00000012259	ENSPLOG00000012107
Cat	MODERN SPECIES	246	TERB1 (ENSFCAG00000027927)	DYNC1LI2 (ENSFCAG00000015252)	CMTM4 (ENSFCAG00000015251)	CMTM3 (ENSFCAG00000031222)	ENSFCAG00000015249	ENSFCAG00000048102	CKLF (ENSFCAG00000033590)	TK2 (ENSFCAG00000015246)	ENSFCAG00000053350	BEAN1 (ENSFCAG00000015245)	CDH5 (ENSFCAG00000015244)	ENSFCAG00000052653	CDH11 (ENSFCAG00000003320)	CDH8 (ENSFCAG00000010133)	ENSFCAG00000050992	GOT2 (ENSFCAG00000025552) ##22	SLC38A7 (ENSFCAG00000003119)	CNOT1 (ENSFCAG00000025155)	SETD6 (ENSFCAG00000006604)	NDRG4 (ENSFCAG00000006601)	GINS3 (ENSFCAG00000024373)	PRSS54 (ENSFCAG00000041836)	CCDC113 (ENSFCAG00000006596)	CSNK2A2 (ENSFCAG00000030709)	CFAP20 (ENSFCAG00000015358)	MMP15 (ENSFCAG00000002694)	USB1 (ENSFCAG00000002693)	ZNF319 (ENSFCAG00000024689)	TEPP (ENSFCAG00000031698)	ENSFCAG00000002691	KIFC3 (ENSFCAG00000002689)
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00570000079722
Equus	ANCESTRAL SPECIES	20	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00910000148818.b	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00570000079722
Horse	MODERN SPECIES	22	DYNC1LI2 (ENSECAG00000020218)	CMTM3 (ENSECAG00000017746)	CMTM4 (ENSECAG00000018456)	CMTM2 (ENSECAG00000016272)	ENSECAG00000028022	CKLF (ENSECAG00000026929)	ENSECAG00000029867	TK2 (ENSECAG00000007170)	BEAN1 (ENSECAG00000007077)	CDH5 (ENSECAG00000018507)	ENSECAG00000036133	CDH11 (ENSECAG00000008823)	ENSECAG00000007768	CDH8 (ENSECAG00000007246)	ENSECAG00000048613	GOT2 (ENSECAG00000016504) ##22	SLC38A7 (ENSECAG00000007736)	CNOT1 (ENSECAG00000009889)	SETD6 (ENSECAG00000008587)	NDRG4 (ENSECAG00000000099)	GINS3 (ENSECAG00000022245)	PRSS54 (ENSECAG00000020386)	CCDC113 (ENSECAG00000017990)	CSNK2A2 (ENSECAG00000014130)	CFAP20 (ENSECAG00000011027)	MMP15 (ENSECAG00000000196)	USB1 (ENSECAG00000019493)	ZNF319 (ENSECAG00000019473)	TEPP (ENSECAG00000054197)	ENSECAG00000030655	ENSECAG00000014030
Donkey	MODERN SPECIES	20	NAE1 (ENSEASG00005010886)	TERB1 (ENSEASG00005010885)	DYNC1LI2 (ENSEASG00005010884)	ENSEASG00005010883	CMTM3 (ENSEASG00005023812)	CMTM2 (ENSEASG00005027672)	ENSEASG00005010877	TK2 (ENSEASG00005010876)	ENSEASG00005028335	ENSEASG00005029427	CDH5 (ENSEASG00005010871)	ENSEASG00005010867	CDH11 (ENSEASG00005010864)	CDH8 (ENSEASG00005010861)	ENSEASG00005037833	GOT2 (ENSEASG00005010855) ##22	SLC38A7 (ENSEASG00005010854)	ENSEASG00005035398	CNOT1 (ENSEASG00005005819)	ENSEASG00005005524	NDRG4 (ENSEASG00005005520)	GINS3 (ENSEASG00005025728)	PRSS54 (ENSEASG00005028443)	CCDC113 (ENSEASG00005005498)	CSNK2A2 (ENSEASG00005005494)	CFAP20 (ENSEASG00005005491)	MMP15 (ENSEASG00005005488)	USB1 (ENSEASG00005032021)	ZNF319 (ENSEASG00005005481)	TEPP (ENSEASG00005005468)	CNGB1 (ENSEASG00005005456)
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
Megabat	MODERN SPECIES	3765																GOT2 (ENSPVAG00000004248) ##22	SLC38A7 (ENSPVAG00000004245)	CNOT1 (ENSPVAG00000004243)	SETD6 (ENSPVAG00000004240)	NDRG4 (ENSPVAG00000004234)
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
Greater horseshoe bat	MODERN SPECIES	6	CA7 (ENSRFEG00010012260)	NAE1 (ENSRFEG00010011905)	TERB1 (ENSRFEG00010011648)	DYNC1LI2 (ENSRFEG00010011471)	CMTM4 (ENSRFEG00010011382)	CMTM3 (ENSRFEG00010011242)	CMTM2 (ENSRFEG00010011120)	ENSRFEG00010011039	CKLF (ENSRFEG00010010959)	TK2 (ENSRFEG00010010695)	BEAN1 (ENSRFEG00010010604)	CDH5 (ENSRFEG00010010526)	ENSRFEG00010010500	CDH11 (ENSRFEG00010010420)	CDH8 (ENSRFEG00010010296)	GOT2 (ENSRFEG00010010217) ##22	SLC38A7 (ENSRFEG00010010127)	CNOT1 (ENSRFEG00010010002)	SETD6 (ENSRFEG00010009933)	NDRG4 (ENSRFEG00010009611)	GINS3 (ENSRFEG00010009530)	PRSS54 (ENSRFEG00010009504)	CCDC113 (ENSRFEG00010009440)	CSNK2A2 (ENSRFEG00010009368)	CFAP20 (ENSRFEG00010009337)	MMP15 (ENSRFEG00010009308)	USB1 (ENSRFEG00010009236)	ZNF319 (ENSRFEG00010009209)	TEPP (ENSRFEG00010009138)	ENSRFEG00010008461	KIFC3 (ENSRFEG00010008081)
Microbat	DUPLICATION
Microbat	MODERN SPECIES	671																ENSMLUG00000025729 ##22
Microbat	MODERN SPECIES	1200																ENSMLUG00000003748 ##22	SLC38A7 (ENSMLUG00000003740)	CNOT1 (ENSMLUG00000003728)	ENSMLUG00000024608	NDRG4 (ENSMLUG00000026969)	GINS3 (ENSMLUG00000000295)	PRSS54 (ENSMLUG00000000291)	CCDC113 (ENSMLUG00000000287)	CSNK2A2 (ENSMLUG00000000283)	CFAP20 (ENSMLUG00000000280)
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Primates	ANCESTRAL SPECIES	21	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	2239																ENSTSYG00000032927 ##22
Tarsier	MODERN SPECIES	6382															ENSTSYG00000036905	GOT2 (ENSTSYG00000012925) ##22	SLC38A7 (ENSTSYG00000000068)	ZNF354A (ENSTSYG00000008405)
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a ##22	ENSGT00940000165383	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Catarrhini	DUPLICATION
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES																	ENSGT00950000183082.a.db.a ##22
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00950000183082.a.db.a ##22
Rhinopithecus	ANCESTRAL SPECIES	137	ENSGT00940000160666	ENSGT00940000158731	ENSGT00940000154677.g.b	ENSGT00390000017736.a	ENSGT00390000014577.a.k.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b	ENSGT00940000163609	ENSGT00950000182970.B	ENSGT00940000158779	ENSGT00940000154685.b	ENSGT00950000183082.a.db.a ##22	ENSGT00940000155319	ENSGT00940000165587	ENSGT00940000161987	ENSGT00940000163227	ENSGT00910000148281	ENSGT00940000163321	ENSGT00940000163993	ENSGT00940000163789	ENSGT00940000162719	ENSGT00940000162140	ENSGT00940000162751	ENSGT00940000161796	ENSGT00940000161945	ENSGT00940000161161.b
Golden snub-nosed monkey	MODERN SPECIES	1983	ENSRROG00000027291	ENSRROG00000039525	AICDA (ENSRROG00000032866)	ENSRROG00000032310	MFAP5 (ENSRROG00000008374)	ENSRROG00000032902	A2ML1 (ENSRROG00000036769)	PHC1 (ENSRROG00000038246)	M6PR (ENSRROG00000040189)	KLRG1 (ENSRROG00000042899)	PZP (ENSRROG00000036968)	ENSRROG00000040071	DDX11 (ENSRROG00000042965)	ENSRROG00000039611	KLRB1 (ENSRROG00000040177)	ENSRROG00000043349 ##22	CLEC2D (ENSRROG00000000295)	ENSRROG00000033345	CD69 (ENSRROG00000044076)	KLRF1 (ENSRROG00000033709)	ENSRROG00000043852	CLEC2B (ENSRROG00000033935)	KLRF2 (ENSRROG00000015611)	CLEC2A (ENSRROG00000033409)	CLEC12A (ENSRROG00000036117)	CLEC1B (ENSRROG00000042348)	CLEC12B (ENSRROG00000030672)	CLEC9A (ENSRROG00000025053)	CLEC1A (ENSRROG00000040102)	CLEC7A (ENSRROG00000044964)
Black snub-nosed monkey	MODERN SPECIES	1176	CLEC4E (ENSRBIG00000029081)	ENSRBIG00000006703	AICDA (ENSRBIG00000026659)	MFAP5 (ENSRBIG00000039461)	ENSRBIG00000044995	A2ML1 (ENSRBIG00000027686)	ENSRBIG00000044582	PHC1 (ENSRBIG00000044365)	M6PR (ENSRBIG00000024291)	KLRG1 (ENSRBIG00000005150)	A2M (ENSRBIG00000044938)	PZP (ENSRBIG00000034456)	DDX11 (ENSRBIG00000040952)	ENSRBIG00000034447	KLRB1 (ENSRBIG00000041764)	ENSRBIG00000033403 ##22	ENSRBIG00000028621	ENSRBIG00000037194	ENSRBIG00000008767	DPH6 (ENSRBIG00000026106)	ENSRBIG00000027827	ZNF770 (ENSRBIG00000038198)	ENSRBIG00000035300	ENSRBIG00000042060	AQR (ENSRBIG00000038017)	ACTC1 (ENSRBIG00000036879)	GJD2 (ENSRBIG00000034546)
Hominoidea	ANCESTRAL SPECIES																	ENSGT00950000183082.a.db.a ##22
Gibbon	MODERN SPECIES	15	CLEC4D (ENSNLEG00000001828)	CLEC4E (ENSNLEG00000001893)	AICDA (ENSNLEG00000001917)	ENSNLEG00000028482	MFAP5 (ENSNLEG00000002089)	ENSNLEG00000030974	A2ML1 (ENSNLEG00000002230)	PHC1 (ENSNLEG00000002262)	M6PR (ENSNLEG00000031875)	KLRG1 (ENSNLEG00000002364)	A2M (ENSNLEG00000002368)	PZP (ENSNLEG00000002652)	DDX11 (ENSNLEG00000002676)	ENSNLEG00000002934	KLRB1 (ENSNLEG00000032753)	ENSNLEG00000027204 ##22	ENSNLEG00000035987	CLEC2D (ENSNLEG00000002956)	CD69 (ENSNLEG00000002968)	KLRF1 (ENSNLEG00000003000)	CLEC2B (ENSNLEG00000031735)	KLRF2 (ENSNLEG00000003058)	CLEC2A (ENSNLEG00000003073)	CLEC12A (ENSNLEG00000003074)	CLEC1B (ENSNLEG00000003077)	CLEC9A (ENSNLEG00000003108)	CLEC1A (ENSNLEG00000003121)	ENSNLEG00000034681	CLEC7A (ENSNLEG00000003175)	OLR1 (ENSNLEG00000003197)	TMEM52B (ENSNLEG00000003211)
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00390000013440	ENSGT00390000003800	ENSGT01030000234601.c.a.b	ENSGT00390000003753.b	ENSGT00910000147724	ENSGT00930000151058	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197.s.a	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a	ENSGT00950000183082.a.db.b ##22	ENSGT00940000153908.a	ENSGT00940000161146	ENSGT00940000159982	ENSGT00940000159950	ENSGT00950000183119.b	ENSGT00940000155728	ENSGT00510000048519	ENSGT00940000156628	ENSGT01080000257336.b.e.b.a.a	ENSGT01080000257336.b.e.b.a.b.a.e.a	ENSGT01080000257336.b.e.b.a.b.a.e.b	ENSGT01080000257336.b.e.b.a.b.a.f	ENSGT01080000257336.b.e.b.a.b.b	ENSGT00510000048671	ENSGT00390000014894
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00390000013440	ENSGT00390000003800	ENSGT01030000234601.c.a.b	ENSGT00390000003753.b	ENSGT00910000147724	ENSGT00930000151058	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197.s.a	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a	ENSGT00950000183082.a.db.b ##22	ENSGT00940000153908.a	ENSGT00940000161146	ENSGT00940000159982	ENSGT00940000159950	ENSGT00950000183119.b	ENSGT00940000155728	ENSGT00510000048519	ENSGT00940000156628	ENSGT01080000257336.b.e.b.a.a	ENSGT01080000257336.b.e.b.a.b.a.e.a	ENSGT01080000257336.b.e.b.a.b.a.e.b	ENSGT01080000257336.b.e.b.a.b.a.f	ENSGT01080000257336.b.e.b.a.b.b	ENSGT00510000048671	ENSGT00390000014894
Gibbon	MODERN SPECIES	15	C12orf60 (ENSNLEG00000003965)	ART4 (ENSNLEG00000003973)	ENSNLEG00000003978	ENSNLEG00000031944	ERP27 (ENSNLEG00000003988)	ARHGDIB (ENSNLEG00000003994)	PDE6H (ENSNLEG00000004014)	ENSNLEG00000034206	RERG (ENSNLEG00000029492)	PTPRO (ENSNLEG00000004033)	EPS8 (ENSNLEG00000004075)	STRAP (ENSNLEG00000004160)	DERA (ENSNLEG00000004222)	SLC15A5 (ENSNLEG00000004266)	MGST1 (ENSNLEG00000004275)	ENSNLEG00000027116 ##22	ENSNLEG00000004291	ENSNLEG00000027110	ENSNLEG00000031747	RERGL (ENSNLEG00000004322)	PIK3C2G (ENSNLEG00000004329)	PLCZ1 (ENSNLEG00000004405)	CAPZA3 (ENSNLEG00000018528)	PLEKHA5 (ENSNLEG00000004443)	AEBP2 (ENSNLEG00000004553)	PDE3A (ENSNLEG00000004579)	SLCO1C1 (ENSNLEG00000004608)	SLCO1B3 (ENSNLEG00000004681)	ENSNLEG00000030381	SLCO1B1 (ENSNLEG00000004722)	SLCO1A2 (ENSNLEG00000004749)
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00390000013440	ENSGT00390000003800	ENSGT01030000234601.c.a.b	ENSGT00390000003753.b	ENSGT00910000147724	ENSGT00930000151058	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197.s.a	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a	ENSGT00950000183082.a.db.b ##22	ENSGT00940000153908.a	ENSGT00940000161146	ENSGT00940000159982	ENSGT00940000159950	ENSGT00950000183119.b	ENSGT00390000014856.c	ENSGT00940000155728	ENSGT00510000048519	ENSGT00550000074878.`b.a.b	ENSGT00940000156628	ENSGT01080000257336.b.e.b.a.a	ENSGT01080000257336.b.e.b.a.b.a.e.a	ENSGT01080000257336.b.e.b.a.b.a.e.b	ENSGT01080000257336.b.e.b.a.b.a.f	ENSGT01080000257336.b.e.b.a.b.b
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00390000013440	ENSGT00390000003800	ENSGT01030000234601.c.a.b	ENSGT00390000003753.b	ENSGT00910000147724	ENSGT00930000151058	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197.s.a	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a	ENSGT00950000183082.a.db.b ##22	ENSGT00940000153908.a	ENSGT00940000161146	ENSGT00940000159982	ENSGT00940000159950	ENSGT00950000183119.b	ENSGT00390000014856.c	ENSGT00940000155728	ENSGT00510000048519	ENSGT00550000074878.`b.a.b	ENSGT00940000156628	ENSGT01080000257336.b.e.b.a.a	ENSGT01080000257336.b.e.b.a.b.a.e.a	ENSGT01080000257336.b.e.b.a.b.a.e.b	ENSGT01080000257336.b.e.b.a.b.a.f	ENSGT01080000257336.b.e.b.a.b.b
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00390000003800	ENSGT01030000234601.c.a.b	ENSGT00390000003753.b	ENSGT00910000147724	ENSGT00930000151058	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000153095.g.b.a.a.a.b.a.b	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197.s.a	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a	ENSGT00950000183082.a.db.b ##22	ENSGT00940000153908.a	ENSGT00940000161146	ENSGT00940000159982	ENSGT00940000159950	ENSGT00950000183119.b	ENSGT00390000014856.c	ENSGT00940000155728	ENSGT00510000048519	ENSGT00550000074878.`b.a.b	ENSGT00940000156628	ENSGT01080000257336.b.e.b.a.a	ENSGT01080000257336.b.e.b.a.b.a.e.a	ENSGT01080000257336.b.e.b.a.b.a.e.b	ENSGT01080000257336.b.e.b.a.b.a.f	ENSGT01080000257336.b.e.b.a.b.b
Macaca	ANCESTRAL SPECIES	6	ENSGT00390000003800	ENSGT01030000234601.c.a.b	ENSGT00390000003753.b	ENSGT00910000147724	ENSGT00930000151058	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000153095.g.b.a.a.a.b.a.b	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197.s.a	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a	ENSGT00950000183082.a.db.b ##22	ENSGT00940000153908.a	ENSGT00940000161146	ENSGT00940000159982	ENSGT00940000159950	ENSGT00950000183119.b	ENSGT00390000014856.c	ENSGT00940000155728	ENSGT00510000048519	ENSGT00550000074878.`b.a.b	ENSGT00940000156628	ENSGT01080000257336.b.e.b.a.a	ENSGT01080000257336.b.e.b.a.b.a.e.a	ENSGT01080000257336.b.e.b.a.b.b	ENSGT00510000048671	ENSGT00390000014894
Pig-tailed macaque	MODERN SPECIES	105	SMCO3 (ENSMNEG00000012628)	ART4 (ENSMNEG00000037221)	MGP (ENSMNEG00000033574)	ENSMNEG00000013508	ERP27 (ENSMNEG00000039931)	ARHGDIB (ENSMNEG00000031899)	PDE6H (ENSMNEG00000043774)	RERG (ENSMNEG00000042410)	ENSMNEG00000035069	PTPRO (ENSMNEG00000045297)	EPS8 (ENSMNEG00000034734)	STRAP (ENSMNEG00000035858)	DERA (ENSMNEG00000045517)	SLC15A5 (ENSMNEG00000034657)	MGST1 (ENSMNEG00000042830)	ENSMNEG00000028350 ##22	LMO3 (ENSMNEG00000039417)	ENSMNEG00000024827	ENSMNEG00000043868	ENSMNEG00000035675	ENSMNEG00000001015	RERGL (ENSMNEG00000043478)	ENSMNEG00000028776	ENSMNEG00000032243	PIK3C2G (ENSMNEG00000034950)	PLCZ1 (ENSMNEG00000039589)	CAPZA3 (ENSMNEG00000028030)	ENSMNEG00000029055	ENSMNEG00000034806	PLEKHA5 (ENSMNEG00000040089)	AEBP2 (ENSMNEG00000031412)
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb ##22	ENSGT00940000165383	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Cercopithecidae	DUPLICATION
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00910000148240	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb.a ##22	ENSGT00940000165383.b	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00910000148240	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb.a ##22	ENSGT00940000165383.b	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00910000148240	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb.a ##22	ENSGT00940000165383.b	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Macaca	ANCESTRAL SPECIES	8	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.c	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00910000148240	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263508.A.d.f	ENSGT00950000183082.a.eb.a ##22	ENSGT00940000165383.b	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203.c	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263508.A.d.f	ENSGT00940000154937.s.a	ENSGT00950000183082.a.eb.a ##22	ENSGT00940000158136	ENSGT01080000257484.A.a.a.a.a	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.b.b.a.b.b.b	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Rhesus	MODERN SPECIES	12	CMTM3 (ENSMMUG00000020847)	ENSMMUG00000049484	CMTM2 (ENSMMUG00000000032)	CMTM1 (ENSMMUG00000029108)	CKLF (ENSMMUG00000064294)	TK2 (ENSMMUG00000000029)	BEAN1 (ENSMMUG00000064932)	CDH5 (ENSMMUG00000023525)	ENSMMUG00000054170	ENSMMUG00000058508	CDH11 (ENSMMUG00000005520)	ENSMMUG00000058024	CDH8 (ENSMMUG00000018511)	ENSMMUG00000050144	ENSMMUG00000018491	GOT2 (ENSMMUG00000006000) ##22	SLC38A7 (ENSMMUG00000006001)	ENSMMUG00000057470	ENSMMUG00000052055	CNOT1 (ENSMMUG00000014625)	SETD6 (ENSMMUG00000014621)	NDRG4 (ENSMMUG00000014618)	GINS3 (ENSMMUG00000009109)	PRSS54 (ENSMMUG00000019451)	CCDC113 (ENSMMUG00000054015)	ENSMMUG00000059448	CSNK2A2 (ENSMMUG00000015892)	CFAP20 (ENSMMUG00000015891)	MMP15 (ENSMMUG00000007052)	USB1 (ENSMMUG00000022669)	TEPP (ENSMMUG00000022666)
Crab-eating macaque	MODERN SPECIES	12	CMTM4 (ENSMFAG00000043754)	CMTM3 (ENSMFAG00000039621)	CMTM2 (ENSMFAG00000038509)	CMTM1 (ENSMFAG00000039438)	CKLF (ENSMFAG00000032896)	TK2 (ENSMFAG00000035489)	BEAN1 (ENSMFAG00000031444)	CDH5 (ENSMFAG00000038308)	ENSMFAG00000058689	CDH11 (ENSMFAG00000040729)	CDH8 (ENSMFAG00000031066)	ENSMFAG00000009336	ENSMFAG00000048151	ENSMFAG00000013034	ENSMFAG00000052233	GOT2 (ENSMFAG00000000866) ##22	SLC38A7 (ENSMFAG00000045340)	ENSMFAG00000063055	ENSMFAG00000058047	CNOT1 (ENSMFAG00000035888)	SETD6 (ENSMFAG00000003198)	NDRG4 (ENSMFAG00000044755)	ENSMFAG00000055077	PRSS54 (ENSMFAG00000045884)	CCDC113 (ENSMFAG00000030602)	ENSMFAG00000048270	CSNK2A2 (ENSMFAG00000043132)	CFAP20 (ENSMFAG00000007227)	ENSMFAG00000054497	MMP15 (ENSMFAG00000034123)	USB1 (ENSMFAG00000003926)
Pig-tailed macaque	MODERN SPECIES	178	CMTM3 (ENSMNEG00000028761)	CMTM2 (ENSMNEG00000037612)	CMTM1 (ENSMNEG00000038140)	CKLF (ENSMNEG00000041932)	ENSMNEG00000000811	TK2 (ENSMNEG00000033766)	BEAN1 (ENSMNEG00000037073)	ENSMNEG00000017786	CDH5 (ENSMNEG00000042861)	CDH11 (ENSMNEG00000043918)	CDH8 (ENSMNEG00000045175)	ENSMNEG00000024176	ENSMNEG00000037496	ENSMNEG00000044282	ENSMNEG00000037447	ENSMNEG00000038406 ##22	ENSMNEG00000026883	SLC38A7 (ENSMNEG00000044122)	CNOT1 (ENSMNEG00000031820)	SETD6 (ENSMNEG00000043306)	NDRG4 (ENSMNEG00000042324)	GINS3 (ENSMNEG00000031079)	PRSS54 (ENSMNEG00000027374)	CCDC113 (ENSMNEG00000028188)	CSNK2A2 (ENSMNEG00000027967)	CFAP20 (ENSMNEG00000036695)	ENSMNEG00000037709	MMP15 (ENSMNEG00000037386)	USB1 (ENSMNEG00000042487)	ZNF319 (ENSMNEG00000020532)	TEPP (ENSMNEG00000033531)
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb.a ##22	ENSGT00940000165383.b	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT01090000260388	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb.a ##22	ENSGT00940000165383.b	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928
Sooty mangabey	MODERN SPECIES	96	TERB1 (ENSCATG00000035233)	DYNC1LI2 (ENSCATG00000040701)	CMTM4 (ENSCATG00000033128)	CMTM3 (ENSCATG00000041455)	CMTM2 (ENSCATG00000010944)	CMTM1 (ENSCATG00000030897)	CKLF (ENSCATG00000032887)	ENSCATG00000003083	TK2 (ENSCATG00000030807)	BEAN1 (ENSCATG00000040570)	CDH5 (ENSCATG00000037405)	ENSCATG00000032894	CDH11 (ENSCATG00000034618)	CDH8 (ENSCATG00000030982)	ENSCATG00000041333	GOT2 (ENSCATG00000037478) ##22	ENSCATG00000038566	SLC38A7 (ENSCATG00000037893)	CNOT1 (ENSCATG00000032625)	SETD6 (ENSCATG00000034972)	NDRG4 (ENSCATG00000044457)	GINS3 (ENSCATG00000041344)	PRSS54 (ENSCATG00000036971)	CCDC113 (ENSCATG00000038695)	CSNK2A2 (ENSCATG00000022640)	CFAP20 (ENSCATG00000030766)	ENSCATG00000018766	MMP15 (ENSCATG00000041035)	USB1 (ENSCATG00000032174)	ZNF319 (ENSCATG00000002643)	TEPP (ENSCATG00000041351)
Drill	MODERN SPECIES	1123														CDH8 (ENSMLEG00000019224)	ENSMLEG00000038567	ENSMLEG00000031726 ##22	SLC38A7 (ENSMLEG00000037964)	CNOT1 (ENSMLEG00000040933)	SETD6 (ENSMLEG00000024552)	NDRG4 (ENSMLEG00000030527)	GINS3 (ENSMLEG00000033381)	ENSMLEG00000032965	DNAJB6 (ENSMLEG00000032232)
Olive baboon	MODERN SPECIES	9	ENSPANG00000038605	ENSPANG00000045651	ENSPANG00000045901	ENSPANG00000050828	ENSPANG00000047535	CDH8 (ENSPANG00000035468)	ENSPANG00000049458	ENSPANG00000045196	ENSPANG00000049524	ENSPANG00000041883	ENSPANG00000049078	ENSPANG00000049232	ENSPANG00000048060	ENSPANG00000042590	ENSPANG00000042986	GOT2 (ENSPANG00000005637) ##22	SLC38A7 (ENSPANG00000015949)	ENSPANG00000041124	ENSPANG00000020901	SETD6 (ENSPANG00000017644)	NDRG4 (ENSPANG00000007666)	GINS3 (ENSPANG00000017093)	ENSPANG00000040458	PRSS54 (ENSPANG00000019623)	CCDC113 (ENSPANG00000021080)	CSNK2A2 (ENSPANG00000041238)	CFAP20 (ENSPANG00000042803)	MMP15 (ENSPANG00000019364)	USB1 (ENSPANG00000025138)	ZNF319 (ENSPANG00000041533)	TEPP (ENSPANG00000005253)
Vervet Monkey	MODERN SPECIES	24	CA7 (ENSCSAG00000004615)	NAE1 (ENSCSAG00000004620)	TERB1 (ENSCSAG00000004627)	DYNC1LI2 (ENSCSAG00000004634)	CMTM4 (ENSCSAG00000004637)	CMTM3 (ENSCSAG00000004645)	CMTM2 (ENSCSAG00000004650)	CMTM1 (ENSCSAG00000004657)	CKLF (ENSCSAG00000004662)	TK2 (ENSCSAG00000004665)	BEAN1 (ENSCSAG00000004668)	CDH5 (ENSCSAG00000004675)	CDH11 (ENSCSAG00000004679)	CDH8 (ENSCSAG00000004687)	ENSCSAG00000018466	GOT2 (ENSCSAG00000004695) ##22	ENSCSAG00000018465	SLC38A7 (ENSCSAG00000004703)	CNOT1 (ENSCSAG00000004731)	SETD6 (ENSCSAG00000004711)	NDRG4 (ENSCSAG00000004744)	GINS3 (ENSCSAG00000004750)	PRSS54 (ENSCSAG00000004759)	CCDC113 (ENSCSAG00000004767)	CSNK2A2 (ENSCSAG00000004772)	CFAP20 (ENSCSAG00000004774)	MMP15 (ENSCSAG00000004779)	USB1 (ENSCSAG00000004783)	ZNF319 (ENSCSAG00000018864)	TEPP (ENSCSAG00000004796)	ENSCSAG00000004825
Rhinopithecus	ANCESTRAL SPECIES	62															ENSGT01100000263690	ENSGT00950000183082.a.eb.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Golden snub-nosed monkey	MODERN SPECIES	2061											CDH8 (ENSRROG00000035054)	ENSRROG00000040098	ENSRROG00000011987	ENSRROG00000044200	ENSRROG00000029432	ENSRROG00000040522 ##22	SLC38A7 (ENSRROG00000037816)	CNOT1 (ENSRROG00000000906)	SETD6 (ENSRROG00000042680)	NDRG4 (ENSRROG00000037815)	GINS3 (ENSRROG00000037290)	PRSS54 (ENSRROG00000040802)
Black snub-nosed monkey	MODERN SPECIES	612														ENSRBIG00000029986	ENSRBIG00000039400	ENSRBIG00000043519 ##22	SLC38A7 (ENSRBIG00000044055)	CNOT1 (ENSRBIG00000044598)	SETD6 (ENSRBIG00000037883)	NDRG4 (ENSRBIG00000041446)	GINS3 (ENSRBIG00000039849)	PRSS54 (ENSRBIG00000025281)	ENSRBIG00000032194	CCDC113 (ENSRBIG00000039715)	CSNK2A2 (ENSRBIG00000030026)	CFAP20 (ENSRBIG00000028425)	ENSRBIG00000040990	MMP15 (ENSRBIG00000037648)	USB1 (ENSRBIG00000044466)	ZNF319 (ENSRBIG00000030200)	TEPP (ENSRBIG00000042385)
Cercopithecidae	ANCESTRAL SPECIES	124															ENSGT00940000165383.a	ENSGT00950000183082.a.eb.b ##22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00950000183082.a.eb.b ##22
Cercopithecinae_a	ANCESTRAL SPECIES	21	ENSGT00940000156961	ENSGT00940000154973	ENSGT00940000160674	ENSGT00940000159720.w.b	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520.q.b	ENSGT00940000154520.q.a	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154519.h	ENSGT00940000154519.g.a	ENSGT00940000154835.C	ENSGT00950000183082.a.eb.b ##22	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00930000151022.d	ENSGT00940000163731	ENSGT00940000158760	ENSGT00500000044993	ENSGT00640000091535	ENSGT00940000154847.a	ENSGT00940000159988	ENSGT00940000156700	ENSGT00390000017498	ENSGT00390000011552	ENSGT00940000156770.n	ENSGT00910000146991
Cercopithecinae_b	ANCESTRAL SPECIES	25	ENSGT00940000156961	ENSGT00940000154973	ENSGT00940000160674	ENSGT00940000159720.w.b	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520.q.b	ENSGT00940000154520.q.a	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154519.h	ENSGT00940000154519.g.a	ENSGT00940000154835.C	ENSGT00950000183082.a.eb.b ##22	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00930000151022.d	ENSGT00940000163731	ENSGT00940000158760	ENSGT00500000044993	ENSGT00640000091535	ENSGT00940000154847.a	ENSGT00940000159988	ENSGT00940000156700	ENSGT00390000017498	ENSGT00390000011552	ENSGT00910000146991	ENSGT00940000156770.m.a
Cercopithecinae_d	ANCESTRAL SPECIES	97	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000156961	ENSGT00940000154973	ENSGT00940000160674	ENSGT00940000159720.w.b	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520.q.b	ENSGT00940000154520.q.a	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154519.g.a	ENSGT00940000154835.C	ENSGT00950000183082.a.eb.b ##22	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00930000151022.d	ENSGT00940000163731	ENSGT00940000158760	ENSGT00500000044993	ENSGT00640000091535	ENSGT00940000154847.a
Drill	MODERN SPECIES	433		BCL2 (ENSMLEG00000025336)	KDSR (ENSMLEG00000029757)	VPS4B (ENSMLEG00000038097)	ENSMLEG00000039412	SERPINB5 (ENSMLEG00000029311)	SERPINB12 (ENSMLEG00000044348)	SERPINB13 (ENSMLEG00000038452)	ENSMLEG00000030840	ENSMLEG00000040948	SERPINB11 (ENSMLEG00000029242)	SERPINB7 (ENSMLEG00000039343)	SERPINB10 (ENSMLEG00000040721)	HMSD (ENSMLEG00000041012)	SERPINB8 (ENSMLEG00000013353)	ENSMLEG00000035620 ##22	CDH7 (ENSMLEG00000029012)	CDH19 (ENSMLEG00000027661)
Macaca	ANCESTRAL SPECIES	22	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000156961	ENSGT00940000154973	ENSGT00940000159720.w.b	ENSGT00940000160674	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520.q.b	ENSGT00940000154520.q.a	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154519.g.a	ENSGT00940000154835.C	ENSGT00950000183082.a.eb.b ##22	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00930000151022.d	ENSGT00940000163731	ENSGT00940000158760	ENSGT00500000044993	ENSGT00640000091535	ENSGT00940000154847.a	ENSGT00940000159988	ENSGT00940000156700	ENSGT00390000017498	ENSGT00390000011552	ENSGT00940000156770.n	ENSGT00910000146991
Pig-tailed macaque	MODERN SPECIES	542	KDSR (ENSMNEG00000044691)	VPS4B (ENSMNEG00000034541)	ENSMNEG00000041767	SERPINB5 (ENSMNEG00000043388)	SERPINB12 (ENSMNEG00000043742)	SERPINB13 (ENSMNEG00000039304)	ENSMNEG00000032395	ENSMNEG00000034680	SERPINB11 (ENSMNEG00000033325)	SERPINB7 (ENSMNEG00000044628)	SERPINB2 (ENSMNEG00000029594)	SERPINB10 (ENSMNEG00000037942)	HMSD (ENSMNEG00000043199)	ENSMNEG00000035980	SERPINB8 (ENSMNEG00000042819)	ENSMNEG00000039363 ##22	CDH7 (ENSMNEG00000000085)	CDH19 (ENSMNEG00000032519)	DSEL (ENSMNEG00000001270)	TMX3 (ENSMNEG00000045035)	CCDC102B (ENSMNEG00000039465)	DOK6 (ENSMNEG00000035412)	CD226 (ENSMNEG00000032934)	RTTN (ENSMNEG00000031497)	SOCS6 (ENSMNEG00000026830)	ENSMNEG00000003341	CBLN2 (ENSMNEG00000041433)
Rhinopithecus	ANCESTRAL SPECIES	279	ENSGT00940000158137.c.a	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000156961	ENSGT00940000154973	ENSGT00940000160674	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154519.g.a	ENSGT00940000154835.C	ENSGT00940000165383.a	ENSGT00950000183082.a.eb.b ##22	ENSGT00940000153503.a.a.q.a
Black snub-nosed monkey	MODERN SPECIES	200				VPS4B (ENSRBIG00000036906)	SERPINB5 (ENSRBIG00000032521)	SERPINB12 (ENSRBIG00000030539)	SERPINB13 (ENSRBIG00000035351)	ENSRBIG00000030827	SERPINB11 (ENSRBIG00000035955)	SERPINB7 (ENSRBIG00000038299)	SERPINB2 (ENSRBIG00000039048)	SERPINB10 (ENSRBIG00000041611)	ENSRBIG00000001100	ENSRBIG00000032498	ENSRBIG00000039583	ENSRBIG00000034003 ##22	SERPINB8 (ENSRBIG00000039024)	ENSRBIG00000022323	CDH7 (ENSRBIG00000028074)	CDH19 (ENSRBIG00000036262)	TMX3 (ENSRBIG00000036395)	CCDC102B (ENSRBIG00000028851)	DOK6 (ENSRBIG00000029494)	CD226 (ENSRBIG00000044967)	ENSRBIG00000033917	RTTN (ENSRBIG00000034760)	GFRAL (ENSRBIG00000021124)	HCRTR2 (ENSRBIG00000030899)
Golden snub-nosed monkey	MODERN SPECIES	2704	ENSRROG00000038725	PHLPP1 (ENSRROG00000001874)	BCL2 (ENSRROG00000041139)	KDSR (ENSRROG00000045372)	VPS4B (ENSRROG00000040329)	SERPINB5 (ENSRROG00000044903)	SERPINB12 (ENSRROG00000035046)	SERPINB13 (ENSRROG00000001115)	ENSRROG00000045797	SERPINB11 (ENSRROG00000007361)	SERPINB7 (ENSRROG00000028650)	SERPINB2 (ENSRROG00000037824)	SERPINB10 (ENSRROG00000029391)	ENSRROG00000037926	SERPINB8 (ENSRROG00000028874)	ENSRROG00000037190 ##22	ENSRROG00000021687
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Gibbon	MODERN SPECIES	2	MRPS14 (ENSNLEG00000034565)	ENSNLEG00000015357	ENSNLEG00000015342	RC3H1 (ENSNLEG00000015327)	SERPINC1 (ENSNLEG00000015323)	ZBTB37 (ENSNLEG00000015319)	DARS2 (ENSNLEG00000015309)	CENPL (ENSNLEG00000015305)	KLHL20 (ENSNLEG00000015296)	ANKRD45 (ENSNLEG00000015292)	TEX50 (ENSNLEG00000015295)	SLC9C2 (ENSNLEG00000015286)	ENSNLEG00000033412	PRDX6 (ENSNLEG00000034494)	TNFSF4 (ENSNLEG00000015276)	ENSNLEG00000030473 ##22	ENSNLEG00000028459	ENSNLEG00000005189	TNFSF18 (ENSNLEG00000015274)	ENSNLEG00000035559	FASLG (ENSNLEG00000015271)	SUCO (ENSNLEG00000015249)	C1orf105 (ENSNLEG00000015241)	PIGC (ENSNLEG00000015248)	DNM3 (ENSNLEG00000015220)	METTL13 (ENSNLEG00000015209)	ENSNLEG00000031601	VAMP4 (ENSNLEG00000015204)	ENSNLEG00000031746	MYOC (ENSNLEG00000015190)	ENSNLEG00000032220
Hominidae	ANCESTRAL SPECIES	9	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Orangutan	MODERN SPECIES	7	PDP2 (ENSPPYG00000007430)	CA7 (ENSPPYG00000007429)	NAE1 (ENSPPYG00000007428)	TERB1 (ENSPPYG00000007427)	DYNC1LI2 (ENSPPYG00000007426)	CMTM4 (ENSPPYG00000007425)	CMTM3 (ENSPPYG00000007424)	ENSPPYG00000030480	CMTM1 (ENSPPYG00000031840)	CKLF (ENSPPYG00000037421)	TK2 (ENSPPYG00000007419)	BEAN1 (ENSPPYG00000037890)	CDH5 (ENSPPYG00000007416)	CDH11 (ENSPPYG00000007415)	CDH8 (ENSPPYG00000007414)	GOT2 (ENSPPYG00000007413) ##22	SLC38A7 (ENSPPYG00000007412)	CNOT1 (ENSPPYG00000007410)	SETD6 (ENSPPYG00000007409)	ENSPPYG00000007408	GINS3 (ENSPPYG00000007407)	PRSS54 (ENSPPYG00000007406)	CCDC113 (ENSPPYG00000007405)	CSNK2A2 (ENSPPYG00000007404)	ENSPPYG00000034784	CFAP20 (ENSPPYG00000007403)	MMP15 (ENSPPYG00000007402)	USB1 (ENSPPYG00000007401)	ZNF319 (ENSPPYG00000033939)	ENSPPYG00000007709	ENSPPYG00000033490
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT01100000263690	ENSGT00950000183082.a.eb ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00390000005764.g.b	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Human	MODERN SPECIES	7	CA7 (ENSG00000168748)	NAE1 (ENSG00000159593)	TERB1 (ENSG00000249961)	DYNC1LI2 (ENSG00000135720)	CMTM4 (ENSG00000183723)	CMTM3 (ENSG00000140931)	CMTM2 (ENSG00000140932)	CMTM1 (ENSG00000089505)	CKLF-CMTM1 (ENSG00000254788)	CKLF (ENSG00000217555)	TK2 (ENSG00000166548)	BEAN1 (ENSG00000166546)	CDH5 (ENSG00000179776)	CDH11 (ENSG00000140937)	CDH8 (ENSG00000150394)	GOT2 (ENSG00000125166) ##22	SLC38A7 (ENSG00000103042)	CNOT1 (ENSG00000125107)	SETD6 (ENSG00000103037)	NDRG4 (ENSG00000103034)	GINS3 (ENSG00000181938)	PRSS54 (ENSG00000103023)	CCDC113 (ENSG00000103021)	CSNK2A2 (ENSG00000070770)	CFAP20 (ENSG00000070761)	MMP15 (ENSG00000102996)	USB1 (ENSG00000103005)	ZNF319 (ENSG00000166188)	TEPP (ENSG00000159648)	CNGB1 (ENSG00000070729)	KIFC3 (ENSG00000140859)
Pan	ANCESTRAL SPECIES		ENSGT00940000154611	ENSGT00940000157143	ENSGT00940000157967	ENSGT00940000159554	ENSGT01030000234618.B.g	ENSGT00390000013877	ENSGT00940000155161	ENSGT00520000059630	ENSGT00390000008829	ENSGT00940000162785	ENSGT00550000074794	ENSGT00950000182878.b.b.`b.a.b.b.d	ENSGT00390000015127	ENSGT00940000165383	ENSGT01100000263690	ENSGT00950000183082.a.eb ##22	ENSGT00390000002560	ENSGT01060000248544.a.a.b.a.b	ENSGT00390000013502.b	ENSGT00390000005496.e	ENSGT00390000015231	ENSGT00940000158056	ENSGT00510000047399	ENSGT00940000155005	ENSGT00390000018145.db	ENSGT00940000158561	ENSGT01050000245064	ENSGT00950000183161.b	ENSGT00940000160256.b	ENSGT00550000076359	ENSGT00940000160945
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	7	DYNC1LI2 (ENSPTRG00000008200)	CMTM4 (ENSPTRG00000008199)	CMTM3 (ENSPTRG00000008198)	CMTM2 (ENSPTRG00000008197)	CMTM1 (ENSPTRG00000008195)	TK2 (ENSPTRG00000043774)	BEAN1 (ENSPTRG00000008192)	CDH5 (ENSPTRG00000008190)	CDH11 (ENSPTRG00000008189)	ENSPTRG00000048094	CDH8 (ENSPTRG00000008186)	ENSPTRG00000023227	ENSPTRG00000049649	ENSPTRG00000045841	ENSPTRG00000044393	GOT2 (ENSPTRG00000008185) ##22	ENSPTRG00000047982	SLC38A7 (ENSPTRG00000008184)	CNOT1 (ENSPTRG00000008183)	SETD6 (ENSPTRG00000008182)	NDRG4 (ENSPTRG00000008181)	GINS3 (ENSPTRG00000008179)	PRSS54 (ENSPTRG00000008178)	ENSPTRG00000034281	CCDC113 (ENSPTRG00000008176)	CSNK2A2 (ENSPTRG00000008175)	CFAP20 (ENSPTRG00000008174)	ENSPTRG00000044572	MMP15 (ENSPTRG00000008173)	USB1 (ENSPTRG00000008172)	ZNF319 (ENSPTRG00000031195)
Chimpanzee	MODERN SPECIES		ENSPTRG00000050685	RABGAP1L (ENSPTRG00000001703)	RC3H1 (ENSPTRG00000001702)	SERPINC1 (ENSPTRG00000001701)	ZBTB37 (ENSPTRG00000001700)	DARS2 (ENSPTRG00000001698)	CENPL (ENSPTRG00000001697)	KLHL20 (ENSPTRG00000001696)	TEX50 (ENSPTRG00000047386)	ANKRD45 (ENSPTRG00000001695)	SLC9C2 (ENSPTRG00000001694)	PRDX6 (ENSPTRG00000042455)	ENSPTRG00000048691	TNFSF4 (ENSPTRG00000001692)	ENSPTRG00000049007	ENSPTRG00000050550 ##22	TNFSF18 (ENSPTRG00000052336)	FASLG (ENSPTRG00000001690)	SUCO (ENSPTRG00000001689)	PIGC (ENSPTRG00000001685)	C1H1orf105 (ENSPTRG00000001687)	DNM3 (ENSPTRG00000001684)	METTL13 (ENSPTRG00000001682)	ENSPTRG00000044048	VAMP4 (ENSPTRG00000001680)	ENSPTRG00000044817	MYOC (ENSPTRG00000001679)	ENSPTRG00000050426	PRRC2C (ENSPTRG00000001678)	FMO4 (ENSPTRG00000001676)	ENSPTRG00000049098
Bonobo	DUPLICATION
Bonobo	MODERN SPECIES	7	NAE1 (ENSPPAG00000041962)	TERB1 (ENSPPAG00000029434)	DYNC1LI2 (ENSPPAG00000041986)	CMTM4 (ENSPPAG00000031336)	CMTM3 (ENSPPAG00000038495)	CMTM2 (ENSPPAG00000019382)	CMTM1 (ENSPPAG00000027683)	TK2 (ENSPPAG00000036388)	BEAN1 (ENSPPAG00000023254)	CDH5 (ENSPPAG00000035788)	CDH11 (ENSPPAG00000022641)	ENSPPAG00000039625	CDH8 (ENSPPAG00000034866)	ENSPPAG00000023609	ENSPPAG00000044058	GOT2 (ENSPPAG00000044063) ##22	ENSPPAG00000044054	SLC38A7 (ENSPPAG00000039431)	CNOT1 (ENSPPAG00000022013)	ENSPPAG00000028988	NDRG4 (ENSPPAG00000037280)	GINS3 (ENSPPAG00000035000)	PRSS54 (ENSPPAG00000039795)	CCDC113 (ENSPPAG00000043813)	CSNK2A2 (ENSPPAG00000039756)	CFAP20 (ENSPPAG00000038314)	ENSPPAG00000034673	MMP15 (ENSPPAG00000041101)	USB1 (ENSPPAG00000042137)	ZNF319 (ENSPPAG00000023652)	ENSPPAG00000042431
Bonobo	MODERN SPECIES		ENSPPAG00000029078	ENSPPAG00000039564	RC3H1 (ENSPPAG00000039253)	SERPINC1 (ENSPPAG00000042631)	ZBTB37 (ENSPPAG00000001236)	DARS2 (ENSPPAG00000041909)	CENPL (ENSPPAG00000015515)	KLHL20 (ENSPPAG00000035618)	TEX50 (ENSPPAG00000032153)	ANKRD45 (ENSPPAG00000027955)	SLC9C2 (ENSPPAG00000028718)	ENSPPAG00000038861	ENSPPAG00000028414	TNFSF4 (ENSPPAG00000032078)	ENSPPAG00000029530	ENSPPAG00000038444 ##22	TNFSF18 (ENSPPAG00000003685)	FASLG (ENSPPAG00000028524)	SUCO (ENSPPAG00000031109)	PIGC (ENSPPAG00000024713)	C1orf105 (ENSPPAG00000040695)	DNM3 (ENSPPAG00000031049)	METTL13 (ENSPPAG00000039457)	ENSPPAG00000036405	ENSPPAG00000032621	VAMP4 (ENSPPAG00000028975)	ENSPPAG00000033093	MYOC (ENSPPAG00000042159)	ENSPPAG00000033768	PRRC2C (ENSPPAG00000037005)	FMO4 (ENSPPAG00000021769)
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	7	ENSGGOG00000027122	CMTM2 (ENSGGOG00000004163)	CMTM1 (ENSGGOG00000022030)	TK2 (ENSGGOG00000003430)	BEAN1 (ENSGGOG00000003427)	CDH5 (ENSGGOG00000005712)	CDH11 (ENSGGOG00000003009)	ENSGGOG00000043422	ENSGGOG00000042582	CDH8 (ENSGGOG00000009772)	ENSGGOG00000044142	ENSGGOG00000024620	ENSGGOG00000041473	ENSGGOG00000007180	ENSGGOG00000036488	GOT2 (ENSGGOG00000005767) ##22	CNOT1 (ENSGGOG00000009547)	ENSGGOG00000009544	NDRG4 (ENSGGOG00000009535)	GINS3 (ENSGGOG00000028093)	PRSS54 (ENSGGOG00000041006)	CCDC113 (ENSGGOG00000013504)	ENSGGOG00000022064	CSNK2A2 (ENSGGOG00000025458)	CFAP20 (ENSGGOG00000005488)	ENSGGOG00000043182	MMP15 (ENSGGOG00000000025)	USB1 (ENSGGOG00000017147)	ZNF319 (ENSGGOG00000017145)	ENSGGOG00000017140	CNGB1 (ENSGGOG00000017130)
Gorilla	MODERN SPECIES		ENSGGOG00000034921	ENSGGOG00000025976	RC3H1 (ENSGGOG00000005735)	ENSGGOG00000027985	ZBTB37 (ENSGGOG00000000324)	ENSGGOG00000036895	DARS2 (ENSGGOG00000000323)	CENPL (ENSGGOG00000014416)	KLHL20 (ENSGGOG00000024508)	TEX50 (ENSGGOG00000042632)	ANKRD45 (ENSGGOG00000023541)	SLC9C2 (ENSGGOG00000010399)	PRDX6 (ENSGGOG00000026357)	TNFSF4 (ENSGGOG00000026898)	ENSGGOG00000040677	ENSGGOG00000042959 ##22	TNFSF18 (ENSGGOG00000005850)	FASLG (ENSGGOG00000023617)	SUCO (ENSGGOG00000004171)	PIGC (ENSGGOG00000024090)	C1orf105 (ENSGGOG00000006809)	DNM3 (ENSGGOG00000008692)	ENSGGOG00000004671	ENSGGOG00000027207	ENSGGOG00000025080	VAMP4 (ENSGGOG00000023200)	ENSGGOG00000009164	MYOC (ENSGGOG00000027553)	MYOCOS (ENSGGOG00000039730)	PRRC2C (ENSGGOG00000011743)	FMO4 (ENSGGOG00000012578)
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005.o	ENSGT00390000003283	ENSGT00390000012628.a.a.d	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000165383	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622.a	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	1275															PCDH7 (ENSANAG00000029987)	ENSANAG00000027397 ##22
Mas night monkey	MODERN SPECIES	968	POLR2C (ENSANAG00000005302)	DOK4 (ENSANAG00000027162)	CCDC102A (ENSANAG00000030176)	ADGRG5 (ENSANAG00000032339)	ADGRG1 (ENSANAG00000034227)	ADGRG3 (ENSANAG00000026238)	DRC7 (ENSANAG00000034106)	KATNB1 (ENSANAG00000034340)	KIFC3 (ENSANAG00000024781)	CNGB1 (ENSANAG00000025998)	TEPP (ENSANAG00000021355)	ZNF319 (ENSANAG00000019739)	USB1 (ENSANAG00000035640)	MMP15 (ENSANAG00000038210)	CFAP20 (ENSANAG00000030496)	GOT2 (ENSANAG00000032779) ##22	ENSANAG00000036839	SLC38A7 (ENSANAG00000019595)	CNOT1 (ENSANAG00000038198)	SETD6 (ENSANAG00000024165)	NDRG4 (ENSANAG00000033593)	ENSANAG00000023206	PRSS54 (ENSANAG00000000490)	CCDC113 (ENSANAG00000020651)	CSNK2A2 (ENSANAG00000036849)	ENSANAG00000037405
Cebidae	ANCESTRAL SPECIES	21	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005.o	ENSGT00390000003283	ENSGT00390000012628.a.a.d	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000165383	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622.a	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283
Marmoset	MODERN SPECIES	12	CA7 (ENSCJAG00000041008)	NAE1 (ENSCJAG00000016658)	TERB1 (ENSCJAG00000016748)	DYNC1LI2 (ENSCJAG00000016771)	CMTM3 (ENSCJAG00000043772)	CMTM2 (ENSCJAG00000016827)	CMTM1 (ENSCJAG00000016841)	CMTM4 (ENSCJAG00000016863)	BEAN1 (ENSCJAG00000016872)	CDH5 (ENSCJAG00000016885)	CDH11 (ENSCJAG00000016939)	CDH8 (ENSCJAG00000017003)	ENSCJAG00000086100	ENSCJAG00000085754	ENSCJAG00000078540	GOT2 (ENSCJAG00000011234) ##22	SLC38A7 (ENSCJAG00000011285)	CNOT1 (ENSCJAG00000011318)	SETD6 (ENSCJAG00000011535)	ENSCJAG00000075690	NDRG4 (ENSCJAG00000011550)	GINS3 (ENSCJAG00000072367)	PRSS54 (ENSCJAG00000086163)	CCDC113 (ENSCJAG00000011662)	CSNK2A2 (ENSCJAG00000011673)	CFAP20 (ENSCJAG00000011700)	MMP15 (ENSCJAG00000011709)	USB1 (ENSCJAG00000011733)	ZNF319 (ENSCJAG00000077794)	TEPP (ENSCJAG00000011752)	ENSCJAG00000071358
Cebidae_a	ANCESTRAL SPECIES	89																ENSGT00950000183082.a ##22	ENSGT00940000165383	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622.a	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283
Capuchin	MODERN SPECIES	297														ENSCCAG00000024256	ENSCCAG00000018715	GOT2 (ENSCCAG00000031805) ##22	ENSCCAG00000037879	SLC38A7 (ENSCCAG00000023373)	CNOT1 (ENSCCAG00000026333)	SETD6 (ENSCCAG00000037152)	NDRG4 (ENSCCAG00000029223)	GINS3 (ENSCCAG00000001219)	PRSS54 (ENSCCAG00000037893)	CCDC113 (ENSCCAG00000036389)	CSNK2A2 (ENSCCAG00000026530)	CFAP20 (ENSCCAG00000033141)	MMP15 (ENSCCAG00000032522)	USB1 (ENSCCAG00000022132)	ZNF319 (ENSCCAG00000020232)	TEPP (ENSCCAG00000034017)	CNGB1 (ENSCCAG00000037806)
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	225																GOT2 (ENSSBOG00000026940) ##22	SLC38A7 (ENSSBOG00000030984)	ENSSBOG00000027227	ENSSBOG00000027795	CNOT1 (ENSSBOG00000029155)	SETD6 (ENSSBOG00000030542)	NDRG4 (ENSSBOG00000020958)	GINS3 (ENSSBOG00000034430)	PRSS54 (ENSSBOG00000023024)	CCDC113 (ENSSBOG00000031812)	CSNK2A2 (ENSSBOG00000026396)	CFAP20 (ENSSBOG00000025757)	MMP15 (ENSSBOG00000020866)	USB1 (ENSSBOG00000029362)	ZNF319 (ENSSBOG00000018861)	TEPP (ENSSBOG00000030652)
Bolivian squirrel monkey	MODERN SPECIES	197					FKBP4 (ENSSBOG00000030928)	ITFG2 (ENSSBOG00000021331)	NRIP2 (ENSSBOG00000021076)	TEX52 (ENSSBOG00000026810)	FOXM1 (ENSSBOG00000026585)	TULP3 (ENSSBOG00000027404)	TEAD4 (ENSSBOG00000025602)	ENSSBOG00000019593	TSPAN9 (ENSSBOG00000000277)	PRMT8 (ENSSBOG00000027867)	CRACR2A (ENSSBOG00000024718)	ENSSBOG00000031519 ##22	PARP11 (ENSSBOG00000032202)	CCND2 (ENSSBOG00000022163)	TIGAR (ENSSBOG00000035082)	FGF23 (ENSSBOG00000027393)	FGF6 (ENSSBOG00000024969)	C12orf4 (ENSSBOG00000030014)	RAD51AP1 (ENSSBOG00000031364)	DYRK4 (ENSSBOG00000022376)	ENSSBOG00000023354	KCNA6 (ENSSBOG00000012723)	KCNA1 (ENSSBOG00000036388)	KCNA5 (ENSSBOG00000036379)	NTF3 (ENSSBOG00000025798)	ANO2 (ENSSBOG00000031554)	VWF (ENSSBOG00000029305)
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00570000079722
Bushbaby	MODERN SPECIES	173																GOT2 (ENSOGAG00000000551) ##22	SLC38A7 (ENSOGAG00000000549)	CNOT1 (ENSOGAG00000000543)	SETD6 (ENSOGAG00000000542)	NDRG4 (ENSOGAG00000000541)	GINS3 (ENSOGAG00000000540)	PRSS54 (ENSOGAG00000024588)	CCDC113 (ENSOGAG00000003283)	CSNK2A2 (ENSOGAG00000003278)	CFAP20 (ENSOGAG00000003277)	MMP15 (ENSOGAG00000003275)	USB1 (ENSOGAG00000003273)	ZNF319 (ENSOGAG00000003269)	TEPP (ENSOGAG00000003264)	ENSOGAG00000003257	KIFC3 (ENSOGAG00000006292)
Lemuriformes	ANCESTRAL SPECIES	31	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000154824.b
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	12	ESRP2 (ENSMICG00000011382)	PLA2G15 (ENSMICG00000011407)	SLC7A6 (ENSMICG00000011413)	SLC7A6OS (ENSMICG00000041758)	PRMT7 (ENSMICG00000011440)	SMPD3 (ENSMICG00000011452)	ZFP90 (ENSMICG00000042833)	ENSMICG00000009582	CDH3 (ENSMICG00000009586)	CDH1 (ENSMICG00000009601)	TANGO6 (ENSMICG00000009615)	HAS3 (ENSMICG00000009622)	CHTF8 (ENSMICG00000042897)	UTP4 (ENSMICG00000009634)	ENSMICG00000034446	ENSMICG00000008954 ##22	SLC38A7 (ENSMICG00000016985)	CNOT1 (ENSMICG00000007071)	SETD6 (ENSMICG00000007057)	NDRG4 (ENSMICG00000007044)	GINS3 (ENSMICG00000003201)	ENSMICG00000006644	CCDC113 (ENSMICG00000046018)	ENSMICG00000008218	CFAP20 (ENSMICG00000008226)	MMP15 (ENSMICG00000017360)	USB1 (ENSMICG00000004900)	ZNF319 (ENSMICG00000004897)	TEPP (ENSMICG00000004890)	CNGB1 (ENSMICG00000004857)	KIFC3 (ENSMICG00000006381)
Mouse lemur	MODERN SPECIES	26	KANSL3 (ENSMICG00000012534)	FER1L5 (ENSMICG00000026458)	LMAN2L (ENSMICG00000047375)	CNNM4 (ENSMICG00000012573)	CNNM3 (ENSMICG00000012595)	ANKRD23 (ENSMICG00000012604)	ANKRD39 (ENSMICG00000042630)	SEMA4C (ENSMICG00000044163)	ENSMICG00000033142	COX5B (ENSMICG00000043097)	ACTR1B (ENSMICG00000007406)	C2orf92 (ENSMICG00000045476)	ZAP70 (ENSMICG00000007422)	TMEM131 (ENSMICG00000007434)	VWA3B (ENSMICG00000001892)	ENSMICG00000035445 ##22	CNGA3 (ENSMICG00000013329)	INPP4A (ENSMICG00000013336)	COA5 (ENSMICG00000036770)	UNC50 (ENSMICG00000028576)	MGAT4A (ENSMICG00000011397)	CRACDL (ENSMICG00000030014)	TSGA10 (ENSMICG00000011594)	C2orf15 (ENSMICG00000011610)	MITD1 (ENSMICG00000011617)	ENSMICG00000011627	LYG2 (ENSMICG00000011632)	LYG1 (ENSMICG00000046017)	ENSMICG00000015951	EIF5B (ENSMICG00000015960)	REV1 (ENSMICG00000015977)
Lemuriformes_a	ANCESTRAL SPECIES	99															ENSGT00940000165383	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000154824.b
Greater bamboo lemur	MODERN SPECIES	1018															CDH8 (ENSPSMG00000012031)	GOT2 (ENSPSMG00000012089) ##22	SLC38A7 (ENSPSMG00000012132)	CNOT1 (ENSPSMG00000012267)	SETD6 (ENSPSMG00000012387)	NDRG4 (ENSPSMG00000012542)	GINS3 (ENSPSMG00000012663)	PRSS54 (ENSPSMG00000012671)
Coquerels sifaka	MODERN SPECIES	388															ENSPCOG00000017802	GOT2 (ENSPCOG00000024545) ##22	SLC38A7 (ENSPCOG00000021947)	CNOT1 (ENSPCOG00000027139)	SETD6 (ENSPCOG00000022856)	NDRG4 (ENSPCOG00000017210)	GINS3 (ENSPCOG00000021715)	PRSS54 (ENSPCOG00000023317)	CCDC113 (ENSPCOG00000014266)	CSNK2A2 (ENSPCOG00000024673)	CFAP20 (ENSPCOG00000015482)	MMP15 (ENSPCOG00000019891)	USB1 (ENSPCOG00000022612)	ZNF319 (ENSPCOG00000007667)	TEPP (ENSPCOG00000027642)	ENSPCOG00000010278	CNGB1 (ENSPCOG00000025745)
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Tree shrew	MODERN SPECIES	4375																GOT2 (ENSTBEG00000001808) ##22	SLC38A7 (ENSTBEG00000001040)	ENSTBEG00000009477
Glires	ANCESTRAL SPECIES	6	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554.hb.a	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000159836	ENSGT00940000161650	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554.hb.a	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000159836	ENSGT00940000161650	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554.hb.a	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00940000159836	ENSGT00940000161650	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554.hb.a	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Degu	DUPLICATION
Degu	MODERN SPECIES	60	ENSODEG00000009096	ENSODEG00000009044	SGCB (ENSODEG00000009784)	ENSODEG00000009977	ENSODEG00000009441	ENSODEG00000019795	ENSODEG00000008705	USP46 (ENSODEG00000009787)	RASL11B (ENSODEG00000010294)	SCFD2 (ENSODEG00000010104)	ENSODEG00000008819	ENSODEG00000019669	ENSODEG00000009001	LNX1 (ENSODEG00000010836)	ENSODEG00000008823	ENSODEG00000008952 ##22	ENSODEG00000009055	ENSODEG00000019624	CHIC2 (ENSODEG00000009727)	GSX2 (ENSODEG00000009015)	PDGFRA (ENSODEG00000009544)	ENSODEG00000011811	KIT (ENSODEG00000012738)	KDR (ENSODEG00000009430)	ENSODEG00000012100	SRD5A3 (ENSODEG00000009796)	TMEM165 (ENSODEG00000009162)	CLOCK (ENSODEG00000009397)	PDCL2 (ENSODEG00000009736)	NMU (ENSODEG00000010066)	EXOC1L (ENSODEG00000011413)
Degu	MODERN SPECIES	157	KCNJ9 (ENSODEG00000009424)	KCNJ10 (ENSODEG00000008231)	PIGM (ENSODEG00000019551)	SLAMF9 (ENSODEG00000008986)	IGSF9 (ENSODEG00000008294)	CFAP45 (ENSODEG00000009032)	VSIG8 (ENSODEG00000008970)	SLAMF8 (ENSODEG00000007757)	DUSP23 (ENSODEG00000008041)	ENSODEG00000008105	APCS (ENSODEG00000007873)	ENSODEG00000008155	ENSODEG00000019581	ENSODEG00000011465	ENSODEG00000010881	ENSODEG00000008544 ##22	ACKR1 (ENSODEG00000009370)	CADM3 (ENSODEG00000008092)	ENSODEG00000008520	ENSODEG00000008976	ENSODEG00000012962	ENSODEG00000010408	ENSODEG00000019839	SPTA1 (ENSODEG00000011975)
Long-tailed chinchilla	MODERN SPECIES	140	CDH16 (ENSCLAG00000009522)	PDP2 (ENSCLAG00000010280)	CA7 (ENSCLAG00000009866)	NAE1 (ENSCLAG00000008427)	TERB1 (ENSCLAG00000007580)	DYNC1LI2 (ENSCLAG00000006461)	CMTM4 (ENSCLAG00000006181)	CMTM3 (ENSCLAG00000005520)	ENSCLAG00000005405	CKLF (ENSCLAG00000008088)	TK2 (ENSCLAG00000008240)	BEAN1 (ENSCLAG00000008190)	CDH5 (ENSCLAG00000012589)	CDH11 (ENSCLAG00000016732)	CDH8 (ENSCLAG00000007676)	GOT2 (ENSCLAG00000007296) ##22	SLC38A7 (ENSCLAG00000006853)	CNOT1 (ENSCLAG00000006289)	SETD6 (ENSCLAG00000004801)	NDRG4 (ENSCLAG00000004372)	GINS3 (ENSCLAG00000007546)	PRSS54 (ENSCLAG00000007356)	CCDC113 (ENSCLAG00000006984)	CSNK2A2 (ENSCLAG00000005997)	CFAP20 (ENSCLAG00000011438)	MMP15 (ENSCLAG00000007587)	USB1 (ENSCLAG00000007363)	ZNF319 (ENSCLAG00000006953)	TEPP (ENSCLAG00000006774)	ENSCLAG00000014685	KIFC3 (ENSCLAG00000008541)
Guinea pig	MODERN SPECIES	22	CA7 (ENSCPOG00000024957)	NAE1 (ENSCPOG00000020116)	TERB1 (ENSCPOG00000015414)	DYNC1LI2 (ENSCPOG00000015409)	CMTM4 (ENSCPOG00000015406)	ENSCPOG00000015404	CKLF (ENSCPOG00000040504)	TK2 (ENSCPOG00000006736)	BEAN1 (ENSCPOG00000036515)	CDH5 (ENSCPOG00000037748)	ENSCPOG00000040767	ENSCPOG00000036927	ENSCPOG00000030109	CDH8 (ENSCPOG00000007504)	ENSCPOG00000032851	GOT2 (ENSCPOG00000031089) ##22	ENSCPOG00000009164	SLC38A7 (ENSCPOG00000009158)	CNOT1 (ENSCPOG00000013026)	SETD6 (ENSCPOG00000023334)	NDRG4 (ENSCPOG00000012449)	GINS3 (ENSCPOG00000035821)	PRSS54 (ENSCPOG00000002647)	CCDC113 (ENSCPOG00000002643)	CSNK2A2 (ENSCPOG00000008436)	CFAP20 (ENSCPOG00000008426)	MMP15 (ENSCPOG00000014329)	USB1 (ENSCPOG00000014325)	ZNF319 (ENSCPOG00000030357)	TEPP (ENSCPOG00000014315)	ENSCPOG00000038901
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	26	CMTM4 (ENSHGLG00000010963)	CMTM3 (ENSHGLG00000011197)	ENSHGLG00000012002	TK2 (ENSHGLG00000032022)	ENSHGLG00000045630	BEAN1 (ENSHGLG00000045590)	ENSHGLG00000013876	ENSHGLG00000017123	ENSHGLG00000017133	ENSHGLG00000046044	ENSHGLG00000034841	ENSHGLG00000033892	ENSHGLG00000013653	ENSHGLG00000012608	ENSHGLG00000034274	ENSHGLG00000010708 ##22	ENSHGLG00000011393	SLC38A7 (ENSHGLG00000012028)	CNOT1 (ENSHGLG00000014322)	SETD6 (ENSHGLG00000012827)	NDRG4 (ENSHGLG00000012553)	GINS3 (ENSHGLG00000041082)	ENSHGLG00000011450	ENSHGLG00000011914	ENSHGLG00000033990	ENSHGLG00000044368	PRSS54 (ENSHGLG00000012351)	CCDC113 (ENSHGLG00000016049)	CSNK2A2 (ENSHGLG00000014843)	CFAP20 (ENSHGLG00000011587)	MMP15 (ENSHGLG00000014300)
Naked mole-rat female	MODERN SPECIES	27	APEH (ENSHGLG00000014615)	ENSHGLG00000014673	AMIGO3 (ENSHGLG00000034610)	ENSHGLG00000041509	GMPPB (ENSHGLG00000010676)	IP6K1 (ENSHGLG00000040829)	CDHR4 (ENSHGLG00000011328)	INKA1 (ENSHGLG00000011955)	TRAIP (ENSHGLG00000035109)	CAMKV (ENSHGLG00000012266)	ENSHGLG00000012408	MST1R (ENSHGLG00000012578)	MON1A (ENSHGLG00000012749)	ENSHGLG00000013189	ENSHGLG00000049279	ENSHGLG00000013715 ##22	RBM5 (ENSHGLG00000014844)	SEMA3F (ENSHGLG00000014917)	GNAT1 (ENSHGLG00000018980)	SLC38A3 (ENSHGLG00000016846)	GNAI2 (ENSHGLG00000012059)	SEMA3B (ENSHGLG00000012514)	LSMEM2 (ENSHGLG00000043970)	IFRD2 (ENSHGLG00000012660)	HYAL3 (ENSHGLG00000035016)	HYAL1 (ENSHGLG00000037077)	HYAL2 (ENSHGLG00000013405)	ENSHGLG00000013681	RASSF1 (ENSHGLG00000014052)	ZMYND10 (ENSHGLG00000010267)	NPRL2 (ENSHGLG00000010655)
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00980000202834	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554.hb.a	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283
Eurasian red squirrel	MODERN SPECIES	8	NAE1 (ENSSVLG00005025610)	TERB1 (ENSSVLG00005025637)	DYNC1LI2 (ENSSVLG00005025665)	CMTM4 (ENSSVLG00005025679)	CMTM3 (ENSSVLG00005025691)	ENSSVLG00005025706	CKLF (ENSSVLG00005025721)	TK2 (ENSSVLG00005025748)	BEAN1 (ENSSVLG00005016934)	ENSSVLG00005016998	CDH5 (ENSSVLG00005017067)	CDH11 (ENSSVLG00005017448)	CDH8 (ENSSVLG00005017549)	ENSSVLG00005017795	ENSSVLG00005017835	GOT2 (ENSSVLG00005017895) ##22	ENSSVLG00005017936	SLC38A7 (ENSSVLG00005017988)	CNOT1 (ENSSVLG00005018264)	SETD6 (ENSSVLG00005018395)	NDRG4 (ENSSVLG00005018581)	GINS3 (ENSSVLG00005018840)	PRSS54 (ENSSVLG00005018883)	CCDC113 (ENSSVLG00005018943)	ENSSVLG00005019189	ENSSVLG00005019222	ENSSVLG00005019291	MMP15 (ENSSVLG00005019370)	USB1 (ENSSVLG00005019676)	ZNF319 (ENSSVLG00005019911)	TEPP (ENSSVLG00005019932)
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000161650	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a.pb ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554.hb.a	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a.pb ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554.hb.a	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	75	ENSSTOG00000031778	ENSSTOG00000029943	PDP2 (ENSSTOG00000007817)	CA7 (ENSSTOG00000021436)	NAE1 (ENSSTOG00000029230)	TERB1 (ENSSTOG00000007763)	DYNC1LI2 (ENSSTOG00000007750)	CMTM4 (ENSSTOG00000007736)	CMTM3 (ENSSTOG00000026680)	CKLF (ENSSTOG00000007682)	TK2 (ENSSTOG00000029024)	BEAN1 (ENSSTOG00000027189)	CDH5 (ENSSTOG00000006256)	CDH11 (ENSSTOG00000011815)	CDH8 (ENSSTOG00000003407)	ENSSTOG00000029905 ##22	SLC38A7 (ENSSTOG00000005590)	CNOT1 (ENSSTOG00000005490)	SETD6 (ENSSTOG00000005479)	NDRG4 (ENSSTOG00000005454)	GINS3 (ENSSTOG00000005709)	PRSS54 (ENSSTOG00000003562)	CCDC113 (ENSSTOG00000028076)	CSNK2A2 (ENSSTOG00000003538)	CFAP20 (ENSSTOG00000003530)	MMP15 (ENSSTOG00000002405)	USB1 (ENSSTOG00000007548)	ZNF319 (ENSSTOG00000019944)	Tepp (ENSSTOG00000002105)	ENSSTOG00000007496	KIFC3 (ENSSTOG00000007446)
Squirrel	MODERN SPECIES	127	TCAF1 (ENSSTOG00000025138)	ENSSTOG00000019601	ENSSTOG00000028506	TAS2R41 (ENSSTOG00000026532)	ENSSTOG00000022623	EPHA1 (ENSSTOG00000005116)	ZYX (ENSSTOG00000021358)	FAM131B (ENSSTOG00000005100)	CLCN1 (ENSSTOG00000005062)	CASP2 (ENSSTOG00000005046)	TMEM139 (ENSSTOG00000032612)	GSTK1 (ENSSTOG00000005030)	TAS2R40 (ENSSTOG00000024653)	TAS2R39 (ENSSTOG00000020541)	ENSSTOG00000032762	ENSSTOG00000020776 ##22	PIP (ENSSTOG00000010593)	OR6V1 (ENSSTOG00000028060)	OR9A2 (ENSSTOG00000023077)	KEL (ENSSTOG00000008372)	LLCFC1 (ENSSTOG00000008360)	TRPV5 (ENSSTOG00000008339)	TRPV6 (ENSSTOG00000007992)	EPHB6 (ENSSTOG00000007963)	ENSSTOG00000007943
Arctic ground squirrel	MODERN SPECIES	533					CANX (ENSUPAG00010012868)	MAML1 (ENSUPAG00010012921)	LTC4S (ENSUPAG00010012940)	MGAT4B (ENSUPAG00010012951)	SQSTM1 (ENSUPAG00010012981)	MRNIP (ENSUPAG00010013026)	TBC1D9B (ENSUPAG00010013038)	RNF130 (ENSUPAG00010013174)	RASGEF1C (ENSUPAG00010013202)	MAPK9 (ENSUPAG00010013292)	GFPT2 (ENSUPAG00010013498)	ENSUPAG00010013530 ##22	CNOT6 (ENSUPAG00010013547)	SCGB3A1 (ENSUPAG00010013577)	FLT4 (ENSUPAG00010013592)	ENSUPAG00010013659	ENSUPAG00010013751
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	167														ENSGT00950000183082.a.qb.b ##22	ENSGT00960000186694	ENSGT00950000183082.a.qb.a ##22
Alpin marmot	MODERN SPECIES	119	ENSMMMG00000010630	CANX (ENSMMMG00000010583)	MAML1 (ENSMMMG00000010563)	LTC4S (ENSMMMG00000010544)	MGAT4B (ENSMMMG00000010531)	SQSTM1 (ENSMMMG00000010495)	ENSMMMG00000010488	ENSMMMG00000010477	ENSMMMG00000010472	TBC1D9B (ENSMMMG00000010464)	RNF130 (ENSMMMG00000010453)	RASGEF1C (ENSMMMG00000010333)	MAPK9 (ENSMMMG00000009979)	GFPT2 (ENSMMMG00000009950)	ENSMMMG00000009922	ENSMMMG00000009920 ##22	CNOT6 (ENSMMMG00000009896)	SCGB3A1 (ENSMMMG00000009881)	FLT4 (ENSMMMG00000009846)	ENSMMMG00000009813	ENSMMMG00000009807	ENSMMMG00000009800	ENSMMMG00000009796	ENSMMMG00000009788
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00950000183082.a.qb.a ##22
Squirrel	MODERN SPECIES	135	ENSSTOG00000028529	CLGN (ENSSTOG00000003055)	MGAT4D (ENSSTOG00000030895)	ELMOD2 (ENSSTOG00000022401)	UCP1 (ENSSTOG00000003104)	TBC1D9 (ENSSTOG00000001453)	RNF150 (ENSSTOG00000029908)	ZNF330 (ENSSTOG00000002498)	IL15 (ENSSTOG00000005776)	INPP4B (ENSSTOG00000005582)	USP38 (ENSSTOG00000025902)	GAB1 (ENSSTOG00000027891)	SMARCA5 (ENSSTOG00000010683)	FREM3 (ENSSTOG00000026754)	HHIP (ENSSTOG00000006708)	ENSSTOG00000022563 ##22	ANAPC10 (ENSSTOG00000007739)	ABCE1 (ENSSTOG00000004621)	OTUD4 (ENSSTOG00000004649)	SMAD1 (ENSSTOG00000010836)	MMAA (ENSSTOG00000010843)	ZNF827 (ENSSTOG00000007761)	LSM6 (ENSSTOG00000002678)	ENSSTOG00000030757	SLC10A7 (ENSSTOG00000023850)	POU4F2 (ENSSTOG00000021113)	TTC29 (ENSSTOG00000003372)	EDNRA (ENSSTOG00000027041)	TMEM184C (ENSSTOG00000003964)	PRMT9 (ENSSTOG00000024013)	ARHGAP10 (ENSSTOG00000004020)
Marmotini	ANCESTRAL SPECIES	167																ENSGT00950000183082.a.qb.b ##22	ENSGT00960000186694	ENSGT00950000183082.a.qb.a ##22
Alpin marmot	MODERN SPECIES	23	CA7 (ENSMMMG00000008570)	NAE1 (ENSMMMG00000008593)	TERB1 (ENSMMMG00000008672)	DYNC1LI2 (ENSMMMG00000008716)	CMTM4 (ENSMMMG00000008768)	ENSMMMG00000008776	ENSMMMG00000008786	CKLF (ENSMMMG00000008795)	TK2 (ENSMMMG00000008801)	BEAN1 (ENSMMMG00000008836)	CDH5 (ENSMMMG00000008857)	CDH11 (ENSMMMG00000008878)	CDH8 (ENSMMMG00000008922)	ENSMMMG00000009066	ENSMMMG00000009084	ENSMMMG00000009093 ##22	ENSMMMG00000009103	SLC38A7 (ENSMMMG00000009115)	ENSMMMG00000009163	CNOT1 (ENSMMMG00000009174)	SETD6 (ENSMMMG00000009470)	NDRG4 (ENSMMMG00000009515)	GINS3 (ENSMMMG00000009647)	PRSS54 (ENSMMMG00000009656)	CCDC113 (ENSMMMG00000009667)	CSNK2A2 (ENSMMMG00000009681)	CFAP20 (ENSMMMG00000009735)	MMP15 (ENSMMMG00000009783)	USB1 (ENSMMMG00000009833)	ZNF319 (ENSMMMG00000009847)	TEPP (ENSMMMG00000009853)
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00950000183082.a.qb.b ##22
Arctic ground squirrel	MODERN SPECIES	555															ENSUPAG00010010011	ENSUPAG00010010005 ##22	OR6V1 (ENSUPAG00010009999)	OR9A2 (ENSUPAG00010009995)	KEL (ENSUPAG00010009971)	LLCFC1 (ENSUPAG00010009964)	TRPV5 (ENSUPAG00010009906)	ENSUPAG00010009886	EPHB6 (ENSUPAG00010009864)	ENSUPAG00010009860	ENSUPAG00010009817	TRBV27 (ENSUPAG00010009812)	ENSUPAG00010009792	TRBV19 (ENSUPAG00010009778)	ENSUPAG00010009770	ENSUPAG00010009768	ENSUPAG00010009761
Squirrel	MODERN SPECIES	339	ADAMTS2 (ENSSTOG00000004811)	RUFY1 (ENSSTOG00000016368)	HNRNPH1 (ENSSTOG00000016376)	CBY3 (ENSSTOG00000013625)	CANX (ENSSTOG00000013636)	MAML1 (ENSSTOG00000013644)	LTC4S (ENSSTOG00000028546)	MGAT4B (ENSSTOG00000015692)	SQSTM1 (ENSSTOG00000013654)	ENSSTOG00000013660	TBC1D9B (ENSSTOG00000013665)	RNF130 (ENSSTOG00000013681)	RASGEF1C (ENSSTOG00000002744)	MAPK9 (ENSSTOG00000002755)	GFPT2 (ENSSTOG00000002766)	ENSSTOG00000026322 ##22	CNOT6 (ENSSTOG00000002803)	SCGB3A1 (ENSSTOG00000029379)	FLT4 (ENSSTOG00000009900)	ENSSTOG00000024162	ENSSTOG00000023199	ENSSTOG00000034786
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Kangaroo rat	MODERN SPECIES	337	Cbfb (ENSDORG00000029036)	ENSDORG00000029390	ENSDORG00000013543	Rrad (ENSDORG00000013540)	Pdp2 (ENSDORG00000024268)	Car7 (ENSDORG00000013532)	Nae1 (ENSDORG00000013530)	Dync1li2 (ENSDORG00000010219)	Cmtm3 (ENSDORG00000008429)	Tk2 (ENSDORG00000015017)	Bean1 (ENSDORG00000015016)	Cdh11 (ENSDORG00000002619)	Cdh8 (ENSDORG00000008036)	ENSDORG00000023898	ENSDORG00000026429	Got2 (ENSDORG00000015354) ##22	Slc38a7 (ENSDORG00000015353)	ENSDORG00000029061	ENSDORG00000002101	Setd6 (ENSDORG00000002098)	Ndrg4 (ENSDORG00000002097)	Gins3 (ENSDORG00000023548)	Prss54 (ENSDORG00000008712)	Ccdc113 (ENSDORG00000008710)	Csnk2a2 (ENSDORG00000001893)	Cfap20 (ENSDORG00000027182)	Mmp15 (ENSDORG00000001890)	Usb1 (ENSDORG00000001888)	Zfp319 (ENSDORG00000027637)	Tepp (ENSDORG00000001883)	ENSDORG00000025807
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Lesser Egyptian jerboa	MODERN SPECIES	102	Dync1li2 (ENSJJAG00000014752)	Cmtm4 (ENSJJAG00000019660)	Cmtm3 (ENSJJAG00000020505)	ENSJJAG00000014677	ENSJJAG00000000150	Tk2 (ENSJJAG00000010805)	Bean1 (ENSJJAG00000011889)	Cdh5 (ENSJJAG00000018476)	ENSJJAG00000023995	ENSJJAG00000005625 #18	Cdh11 (ENSJJAG00000013192)	ENSJJAG00000014411	ENSJJAG00000001226	ENSJJAG00000009504	ENSJJAG00000018972	Got2 (ENSJJAG00000020469) ##22	ENSJJAG00000022746	Slc38a7 (ENSJJAG00000021200)	Cnot1 (ENSJJAG00000000633)	Setd6 (ENSJJAG00000021134)	Ndrg4 (ENSJJAG00000016427)	Gins3 (ENSJJAG00000012705)	Prss54 (ENSJJAG00000015278)	Ccdc113 (ENSJJAG00000020234)	Mmp15 (ENSJJAG00000013467)	Usb1 (ENSJJAG00000021859)	Zfp319 (ENSJJAG00000000816)	ENSJJAG00000013610	ENSJJAG00000021723	Cngb1 (ENSJJAG00000014030)	Kifc3 (ENSJJAG00000010757)
Muroidea	ANCESTRAL SPECIES	19	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	876														Cdh8 (ENSNGAG00000004439)	ENSNGAG00000018601	Got2 (ENSNGAG00000018190) ##22	Slc38a7 (ENSNGAG00000017347)	ENSNGAG00000017721	Cnot1 (ENSNGAG00000018628)	Setd6 (ENSNGAG00000015782)	Ndrg4 (ENSNGAG00000022042)	Gins3 (ENSNGAG00000020714)
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00960000190850	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715.a	ENSGT00940000163203	ENSGT00390000005715.b	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a.f	ENSGT00960000190850	ENSGT00940000153691.a.a.e	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Rat	DUPLICATION
Rat	MODERN SPECIES	10	Cmtm2a (ENSRNOG00000025420)	Cklf (ENSRNOG00000012752)	Tk2 (ENSRNOG00000012853)	Bean1 (ENSRNOG00000066314)	Cdh5 (ENSRNOG00000013324)	ENSRNOG00000065182	Cdh11 (ENSRNOG00000013481)	AABR07042669.1 (ENSRNOG00000031076)	RGD1565617 (ENSRNOG00000038254)	ENSRNOG00000070323	AABR07042733.2 (ENSRNOG00000060024)	Cdh8 (ENSRNOG00000056643)	Polr2l-ps1 (ENSRNOG00000023805)	LOC688815 (ENSRNOG00000060310)	Rpl26-ps3 (ENSRNOG00000067640)	Got2 (ENSRNOG00000011782) ##22	ENSRNOG00000067129	Slc38a7 (ENSRNOG00000012007)	Cnot1 (ENSRNOG00000012271)	ENSRNOG00000069069	Setd6 (ENSRNOG00000012447)	Ndrg4 (ENSRNOG00000012482)	Gins3 (ENSRNOG00000011863)	Prss54 (ENSRNOG00000023092)	Ccdc113 (ENSRNOG00000051510)	Csnk2a2 (ENSRNOG00000011933)	Cfap20 (ENSRNOG00000042179)	Mmp15 (ENSRNOG00000012622)	Usb1 (ENSRNOG00000013216)	Zfp319 (ENSRNOG00000062825)	Tepp (ENSRNOG00000013465)
Rat	DUPLICATION
Rat	MODERN SPECIES	13	Surf2 (ENSRNOG00000066832)	Surf1 (ENSRNOG00000005247)	Surf4 (ENSRNOG00000060005)	Rpl7a (ENSRNOG00000070974)	Med22 (ENSRNOG00000005059)	Surf6 (ENSRNOG00000005031)	Abo (ENSRNOG00000046958)	Rps13 (ENSRNOG00000067444)	AABR07051348.2 (ENSRNOG00000060791)	AABR07051348.1 (ENSRNOG00000059455)	ENSRNOG00000070414	Abo2 (ENSRNOG00000045801)	LOC681385 (ENSRNOG00000043494)	ENSRNOG00000069598	LOC681385 (ENSRNOG00000030708)	ENSRNOG00000064101 ##22	Abo3 (ENSRNOG00000039906)	ENSRNOG00000067433	Rpl9-ps31 (ENSRNOG00000030476)	Lcn1 (ENSRNOG00000033020)	Vegp2 (ENSRNOG00000033761)	ENSRNOG00000068352	LOC102552073 (ENSRNOG00000056471)	LOC681186 (ENSRNOG00000069282)	Dipk1b (ENSRNOG00000004532)	Agpat2 (ENSRNOG00000019466)	Egfl7 (ENSRNOG00000019388)	Notch1 (ENSRNOG00000019322)	Sec16a (ENSRNOG00000019122)	Inpp5e (ENSRNOG00000019039)	Pmpca (ENSRNOG00000026775)
Rat	MODERN SPECIES	46	AABR07039112.1 (ENSRNOG00000022855)	Ophn1 (ENSRNOG00000026573)	Ar (ENSRNOG00000005639)	Eda2r (ENSRNOG00000013018)	RGD1565058 (ENSRNOG00000042779)	Pgr15l (ENSRNOG00000021547)	Gpr165 (ENSRNOG00000012995)	Heph (ENSRNOG00000012294)	LOC100360790 (ENSRNOG00000021694)	Vsig4 (ENSRNOG00000038132)	ENSRNOG00000070436	Msn (ENSRNOG00000030118)	Las1l (ENSRNOG00000021748)	Zc3h12b (ENSRNOG00000011508)	AABR07038957.1 (ENSRNOG00000054638)	Got2-ps6 (ENSRNOG00000057091) ##22	Zc4h2 (ENSRNOG00000056735)	LOC102551431 (ENSRNOG00000066828)	Asb12 (ENSRNOG00000004197)	Amer1 (ENSRNOG00000007984)	Arhgef9 (ENSRNOG00000007733)	Spin4 (ENSRNOG00000038169)	Gmcl1-ps1 (ENSRNOG00000057644)	LOC120099132 (ENSRNOG00000067786)	Zxdb (ENSRNOG00000070035)	Gspt2 (ENSRNOG00000048817)	LOC102551035 (ENSRNOG00000029935)	Maged1 (ENSRNOG00000006756)	Apoo (ENSRNOG00000046918)	LOC685700 (ENSRNOG00000051365)	Klhl15 (ENSRNOG00000006515)
Mus	ANCESTRAL SPECIES	6	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715.a	ENSGT00940000163203.a	ENSGT00940000163203.b	ENSGT00390000005715.b	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a.f	ENSGT00940000153691.a.a.e	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00940000154022.a.a
Shrew mouse	MODERN SPECIES	12	Terb1 (MGP_PahariEiJ_G0023046)	Dync1li2 (MGP_PahariEiJ_G0023045)	Cmtm4 (MGP_PahariEiJ_G0023044)	Cmtm3 (MGP_PahariEiJ_G0023043)	Cmtm2b (MGP_PahariEiJ_G0023042)	MGP_PahariEiJ_G0023041	MGP_PahariEiJ_G0023040	Cmtm2a (MGP_PahariEiJ_G0023039)	MGP_PahariEiJ_G0023038	Tk2 (MGP_PahariEiJ_G0023037)	Bean1 (MGP_PahariEiJ_G0023036)	Cdh5 (MGP_PahariEiJ_G0023035)	MGP_PahariEiJ_G0023033	Cdh11 (MGP_PahariEiJ_G0023032)	Cdh8 (MGP_PahariEiJ_G0023031)	Got2 (MGP_PahariEiJ_G0023030) ##22	Slc38a7 (MGP_PahariEiJ_G0023029)	Cnot1 (MGP_PahariEiJ_G0023028)	Setd6 (MGP_PahariEiJ_G0023027)	Ndrg4 (MGP_PahariEiJ_G0023026)	Gins3 (MGP_PahariEiJ_G0023025)	Prss54 (MGP_PahariEiJ_G0023024)	Ccdc113 (MGP_PahariEiJ_G0023023)	Csnk2a2 (MGP_PahariEiJ_G0023022)	Cfap20 (MGP_PahariEiJ_G0023021)	Mmp15 (MGP_PahariEiJ_G0023020)	Usb1 (MGP_PahariEiJ_G0023019)	Zfp319 (MGP_PahariEiJ_G0023018)	Tepp (MGP_PahariEiJ_G0023017)	Cngb1 (MGP_PahariEiJ_G0023016)	Kifc3 (MGP_PahariEiJ_G0023015)
Mus_A	ANCESTRAL SPECIES	8	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715.a	ENSGT00940000163203.a	ENSGT00390000005715.b	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a.f	ENSGT00940000153691.a.a.e	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00940000154022.a.a
Ryukyu mouse	MODERN SPECIES	17	Terb1 (MGP_CAROLIEiJ_G0031448)	Dync1li2 (MGP_CAROLIEiJ_G0031447)	Cmtm4 (MGP_CAROLIEiJ_G0031446)	Cmtm3 (MGP_CAROLIEiJ_G0031445)	Cmtm2b (MGP_CAROLIEiJ_G0031444)	MGP_CAROLIEiJ_G0031443	MGP_CAROLIEiJ_G0031442	Cklf (MGP_CAROLIEiJ_G0031441)	Tk2 (MGP_CAROLIEiJ_G0031440)	MGP_CAROLIEiJ_G0031439	Cdh5 (MGP_CAROLIEiJ_G0031438)	MGP_CAROLIEiJ_G0031436	Cdh11 (MGP_CAROLIEiJ_G0031435)	Cdh8 (MGP_CAROLIEiJ_G0031434)	MGP_CAROLIEiJ_G0031433	MGP_CAROLIEiJ_G0031432 ##22	Slc38a7 (MGP_CAROLIEiJ_G0031431)	Cnot1 (MGP_CAROLIEiJ_G0031430)	Setd6 (MGP_CAROLIEiJ_G0031429)	Ndrg4 (MGP_CAROLIEiJ_G0031428)	Gins3 (MGP_CAROLIEiJ_G0031427)	Prss54 (MGP_CAROLIEiJ_G0031426)	Ccdc113 (MGP_CAROLIEiJ_G0031425)	Csnk2a2 (MGP_CAROLIEiJ_G0031424)	Cfap20 (MGP_CAROLIEiJ_G0031423)	Mmp15 (MGP_CAROLIEiJ_G0031422)	Usb1 (MGP_CAROLIEiJ_G0031421)	Zfp319 (MGP_CAROLIEiJ_G0031420)	Tepp (MGP_CAROLIEiJ_G0031419)	Cngb1 (MGP_CAROLIEiJ_G0031418)	Kifc3 (MGP_CAROLIEiJ_G0031417)
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715.a	ENSGT00940000163203.a	ENSGT00390000005715.b	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a.e	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00940000154022.a.a
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715.a	ENSGT00940000163203.a	ENSGT00390000005715.b	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b	ENSGT00940000154022.a.a
spretus	MODERN SPECIES	17	Car7 (MGP_SPRETEiJ_G0032567)	Nae1 (MGP_SPRETEiJ_G0032566)	Terb1 (MGP_SPRETEiJ_G0032565)	Dync1li2 (MGP_SPRETEiJ_G0032564)	Cmtm4 (MGP_SPRETEiJ_G0032563)	Cmtm3 (MGP_SPRETEiJ_G0032562)	Cmtm2b (MGP_SPRETEiJ_G0032561)	MGP_SPRETEiJ_G0032560	MGP_SPRETEiJ_G0032559	Cklf (MGP_SPRETEiJ_G0032558)	Tk2 (MGP_SPRETEiJ_G0032557)	Bean1 (MGP_SPRETEiJ_G0032556)	Cdh5 (MGP_SPRETEiJ_G0032555)	Cdh11 (MGP_SPRETEiJ_G0032553)	Cdh8 (MGP_SPRETEiJ_G0032552)	Got2 (MGP_SPRETEiJ_G0032551) ##22	Slc38a7 (MGP_SPRETEiJ_G0032550)	Cnot1 (MGP_SPRETEiJ_G0032549)	Setd6 (MGP_SPRETEiJ_G0032548)	Ndrg4 (MGP_SPRETEiJ_G0032547)	Gins3 (MGP_SPRETEiJ_G0032546)	Prss54 (MGP_SPRETEiJ_G0032545)	Ccdc113 (MGP_SPRETEiJ_G0032544)	Csnk2a2 (MGP_SPRETEiJ_G0032543)	Cfap20 (MGP_SPRETEiJ_G0032542)	Mmp15 (MGP_SPRETEiJ_G0032541)	Usb1 (MGP_SPRETEiJ_G0032540)	Zfp319 (MGP_SPRETEiJ_G0032539)	Tepp (MGP_SPRETEiJ_G0032538)	Cngb1 (MGP_SPRETEiJ_G0032537)	Kifc3 (MGP_SPRETEiJ_G0032536)
Steppe mouse	MODERN SPECIES	3188															ENSMSIG00000006376	Got2 (ENSMSIG00000006324) ##22	Slc38a7 (ENSMSIG00000006282)	Cnot1 (ENSMSIG00000005580)	Setd6 (ENSMSIG00000005533)	Ndrg4 (ENSMSIG00000005411)	Gins3 (ENSMSIG00000005389)	Prss54 (ENSMSIG00000005343)	Ccdc113 (ENSMSIG00000005318)	ENSMSIG00000005247	Cfap20 (ENSMSIG00000005199)	Mmp15 (ENSMSIG00000005181)	Usb1 (ENSMSIG00000005140)	Zfp319 (ENSMSIG00000005132)	ENSMSIG00000005046	Cngb1 (ENSMSIG00000004859)	Kifc3 (ENSMSIG00000004726)
Mouse	MODERN SPECIES	17	Car7 (ENSMUSG00000031883)	Nae1 (ENSMUSG00000031878)	Terb1 (ENSMUSG00000052616)	Dync1li2 (ENSMUSG00000035770)	Cmtm4 (ENSMUSG00000096188)	Cmtm3 (ENSMUSG00000031875)	Cmtm2b (ENSMUSG00000035785)	Cmtm1 (ENSMUSG00000110430)	Cmtm2a (ENSMUSG00000074127)	Cklf (ENSMUSG00000054400)	Tk2 (ENSMUSG00000035824)	Bean1 (ENSMUSG00000031872)	Cdh5 (ENSMUSG00000031871)	Cdh11 (ENSMUSG00000031673)	Cdh8 (ENSMUSG00000036510)	Got2 (ENSMUSG00000031672) ##22	Slc38a7 (ENSMUSG00000036534)	Sap18b (ENSMUSG00000061104)	Cnot1 (ENSMUSG00000036550)	Setd6 (ENSMUSG00000031671)	Ndrg4 (ENSMUSG00000036564)	Gins3 (ENSMUSG00000031669)	Prss54 (ENSMUSG00000048400)	Ccdc113 (ENSMUSG00000036598)	Csnk2a2 (ENSMUSG00000046707)	Cfap20 (ENSMUSG00000031796)	Mmp15 (ENSMUSG00000031790)	Usb1 (ENSMUSG00000031792)	Zfp319 (ENSMUSG00000046556)	Tepp (ENSMUSG00000090206)	Cngb1 (ENSMUSG00000031789)
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00960000190850	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283	ENSGT00940000154022.a.a
Chinese hamster chok1gshd	MODERN SPECIES	112	Nae1 (ENSCGRG00001024810)	Terb1 (ENSCGRG00001020854)	Dync1li2 (ENSCGRG00001024490)	Cmtm4 (ENSCGRG00001022900)	Cmtm3 (ENSCGRG00001009064)	ENSCGRG00001003108	ENSCGRG00001018415	Cklf (ENSCGRG00001011441)	Tk2 (ENSCGRG00001016771)	Bean1 (ENSCGRG00001019666)	Cdh5 (ENSCGRG00001016243)	Cdh11 (ENSCGRG00001019799)	Cdh8 (ENSCGRG00001019245)	ENSCGRG00001004607	ENSCGRG00001021935	Got2 (ENSCGRG00001020789) ##22	Slc38a7 (ENSCGRG00001013563)	ENSCGRG00001001590	Setd6 (ENSCGRG00001022683)	Cnot1 (ENSCGRG00001016365)	Ndrg4 (ENSCGRG00001007892)	Gins3 (ENSCGRG00001000318)	Prss54 (ENSCGRG00001018712)	Ccdc113 (ENSCGRG00001014002)	Csnk2a2 (ENSCGRG00001002993)	Cfap20 (ENSCGRG00001012310)	Mmp15 (ENSCGRG00001020478)	USB1 (ENSCGRG00001011243)	Zfp319 (ENSCGRG00001009557)	Tepp (ENSCGRG00001012906)	Cngb1 (ENSCGRG00001006048)
Golden Hamster	MODERN SPECIES	701	Dync1li2 (ENSMAUG00000011837)	Cmtm4 (ENSMAUG00000011070)	Cmtm3 (ENSMAUG00000010935)	ENSMAUG00000010482	Cklf (ENSMAUG00000019904)	Tk2 (ENSMAUG00000014656)	Bean1 (ENSMAUG00000018813)	Cdh5 (ENSMAUG00000016489)	Cdh11 (ENSMAUG00000015471)	ENSMAUG00000017111	ENSMAUG00000015943	ENSMAUG00000014350	ENSMAUG00000013353	Cdh8 (ENSMAUG00000000265)	ENSMAUG00000012456	Got2 (ENSMAUG00000018221) ##22	Slc38a7 (ENSMAUG00000016252)	ENSMAUG00000014000	ENSMAUG00000009731	Setd6 (ENSMAUG00000004853)	Ndrg4 (ENSMAUG00000016805)	Gins3 (ENSMAUG00000008574)	Prss54 (ENSMAUG00000000894)	Ccdc113 (ENSMAUG00000000235)	Csnk2a2 (ENSMAUG00000008176)	Cfap20 (ENSMAUG00000002778)	Mmp15 (ENSMAUG00000008723)	Usb1 (ENSMAUG00000007832)	Zfp319 (ENSMAUG00000006878)	Tepp (ENSMAUG00000000492)	ENSMAUG00000015513
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00960000190850	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000154824.b
Northern American deer mouse	MODERN SPECIES	18	Cmtm4 (ENSPEMG00000025674)	Cmtm3 (ENSPEMG00000002082)	ENSPEMG00000001497	ENSPEMG00000026503	Cklf (ENSPEMG00000000227)	Tk2 (ENSPEMG00000018292)	ENSPEMG00000017019	Cdh5 (ENSPEMG00000014964)	ENSPEMG00000025771	Cdh11 (ENSPEMG00000014085)	ENSPEMG00000021934	Cdh8 (ENSPEMG00000019307)	ENSPEMG00000028852	ENSPEMG00000007608	ENSPEMG00000013771	Got2 (ENSPEMG00000004344) ##22	Slc38a7 (ENSPEMG00000007495)	ENSPEMG00000026593	Setd6 (ENSPEMG00000000631)	Ndrg4 (ENSPEMG00000005871)	Gins3 (ENSPEMG00000027744)	Prss54 (ENSPEMG00000009039)	Ccdc113 (ENSPEMG00000010298)	Csnk2a2 (ENSPEMG00000029224)	Cfap20 (ENSPEMG00000011496)	Mmp15 (ENSPEMG00000012320)	Usb1 (ENSPEMG00000016183)	Zfp319 (ENSPEMG00000028896)	Tepp (ENSPEMG00000013610)	ENSPEMG00000025572	ENSPEMG00000018348
Prairie vole	MODERN SPECIES	12	Car7 (ENSMOCG00000018579)	Nae1 (ENSMOCG00000015303)	Terb1 (ENSMOCG00000002618)	Dync1li2 (ENSMOCG00000012762)	Cmtm4 (ENSMOCG00000020651)	Cmtm3 (ENSMOCG00000004281)	ENSMOCG00000022522	Cklf (ENSMOCG00000018064)	Tk2 (ENSMOCG00000010580)	Bean1 (ENSMOCG00000013884)	Cdh5 (ENSMOCG00000011293)	Cdh11 (ENSMOCG00000012927)	Cdh8 (ENSMOCG00000018034)	ENSMOCG00000008502	ENSMOCG00000014438	Got2 (ENSMOCG00000017255) ##22	ENSMOCG00000021164	Slc38a7 (ENSMOCG00000013308)	Cnot1 (ENSMOCG00000017969)	Setd6 (ENSMOCG00000019435)	Ndrg4 (ENSMOCG00000019186)	Gins3 (ENSMOCG00000010456)	Prss54 (ENSMOCG00000022303)	Ccdc113 (ENSMOCG00000017588)	Csnk2a2 (ENSMOCG00000021876)	Cfap20 (ENSMOCG00000012774)	ENSMOCG00000010223	Mmp15 (ENSMOCG00000004241)	Usb1 (ENSMOCG00000022647)	Zfp319 (ENSMOCG00000005503)	Tepp (ENSMOCG00000002923)
Lagomorpha	ANCESTRAL SPECIES	48	ENSGT00390000017697.b	ENSGT00940000159836	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000160432	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00960000186694	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722	ENSGT00940000162283
Pika	MODERN SPECIES	5401																ENSOPRG00000004690 ##22	ENSOPRG00000004654
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	16	CMTM3 (ENSOCUG00000027757)	ENSOCUG00000026523	CKLF (ENSOCUG00000038857)	ENSOCUG00000014873	ENSOCUG00000021527	ENSOCUG00000039132	CDH5 (ENSOCUG00000010192)	CDH11 (ENSOCUG00000017019)	ENSOCUG00000013269	ENSOCUG00000022105	ENSOCUG00000038879	NPM1 (ENSOCUG00000021499)	CDH8 (ENSOCUG00000013774)	ENSOCUG00000034960	ENSOCUG00000030517	GOT2 (ENSOCUG00000003871) ##22	SLC38A7 (ENSOCUG00000003868)	CNOT1 (ENSOCUG00000006911)	SETD6 (ENSOCUG00000006903)	NDRG4 (ENSOCUG00000022245)	GINS3 (ENSOCUG00000006054)	PRSS54 (ENSOCUG00000027370)	CCDC113 (ENSOCUG00000008832)	CSNK2A2 (ENSOCUG00000005074)	CFAP20 (ENSOCUG00000014026)	MMP15 (ENSOCUG00000014015)	ZNF319 (ENSOCUG00000011058)	TEPP (ENSOCUG00000011053)	ENSOCUG00000037145	ENSOCUG00000010540	KIFC3 (ENSOCUG00000012069)
Rabbit	MODERN SPECIES	20	RPRD1A (ENSOCUG00000008096)	C18orf21 (ENSOCUG00000028046)	ENSOCUG00000000127	ENSOCUG00000037751	ENSOCUG00000030133	ENSOCUG00000016039	ZNF24 (ENSOCUG00000029679)	ENSOCUG00000029705	ZSCAN30 (ENSOCUG00000005172)	ZNF397 (ENSOCUG00000007099)	ENSOCUG00000031579	MAPRE2 (ENSOCUG00000003781)	DTNA (ENSOCUG00000003773)	NOL4 (ENSOCUG00000007908)	ASXL3 (ENSOCUG00000010832)	ENSOCUG00000025283 ##22	ENSOCUG00000035155	CCDC178 (ENSOCUG00000009093)	KLHL14 (ENSOCUG00000008583)	ENSOCUG00000030346	GAREM1 (ENSOCUG00000013761)	MEP1B (ENSOCUG00000013743)	RNF138 (ENSOCUG00000007201)	TRAPPC8 (ENSOCUG00000013300)	B4GALT6 (ENSOCUG00000013287)	TTR (ENSOCUG00000017348)	DSG2 (ENSOCUG00000007355)	ENSOCUG00000007348	DSG4 (ENSOCUG00000007342)	DSG1 (ENSOCUG00000006498)	DSC1 (ENSOCUG00000012534)
Atlantogenata	ANCESTRAL SPECIES	24	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00530000063956.b.b	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00390000004596	ENSGT00940000160309	ENSGT00390000013928	ENSGT00570000079722
Afrotheria	ANCESTRAL SPECIES	48	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554
Afrotheria_a	ANCESTRAL SPECIES	47	ENSGT00940000160687	ENSGT00940000159757	ENSGT00550000074901	ENSGT00390000005075	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432	ENSGT00390000005715	ENSGT00940000163203	ENSGT00940000162264	ENSGT00940000158005	ENSGT00390000003283	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00950000182872.f.b.a	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554
Elephant	MODERN SPECIES	419	PDP2 (ENSLAFG00000001832)	CA7 (ENSLAFG00000000263)	NAE1 (ENSLAFG00000022057)	TERB1 (ENSLAFG00000009064)	DYNC1LI2 (ENSLAFG00000009061)	CMTM4 (ENSLAFG00000028933)	CMTM3 (ENSLAFG00000022150)	ENSLAFG00000009638	CKLF (ENSLAFG00000009630)	TK2 (ENSLAFG00000009627)	BEAN1 (ENSLAFG00000009624)	CDH5 (ENSLAFG00000006861)	CDH11 (ENSLAFG00000013684)	CDH8 (ENSLAFG00000013363)	ENSLAFG00000029402	GOT2 (ENSLAFG00000000107) ##22	SLC38A7 (ENSLAFG00000000104)	ENSLAFG00000031795	CNOT1 (ENSLAFG00000000098)	SETD6 (ENSLAFG00000000097)	NDRG4 (ENSLAFG00000000095)	GINS3 (ENSLAFG00000005433)	PRSS54 (ENSLAFG00000013546)	CCDC113 (ENSLAFG00000013539)	CSNK2A2 (ENSLAFG00000013535)	CFAP20 (ENSLAFG00000022610)
Hyrax	MODERN SPECIES	461																GOT2 (ENSPCAG00000012069) ##22	SLC38A7 (ENSPCAG00000011955)
Tenrec	MODERN SPECIES	2347																ENSETEG00000003279 ##22
Xenarthra	ANCESTRAL SPECIES	281																ENSGT00950000183082.a ##22	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C	ENSGT00390000001622	ENSGT01020000230389.a.a.b	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000004554	ENSGT00940000156939	ENSGT00940000160309	ENSGT00390000013928	ENSGT00940000162283
Armadillo	MODERN SPECIES	4506											CDH8 (ENSDNOG00000010731)	ENSDNOG00000034082	ENSDNOG00000040780	ENSDNOG00000019616	ENSDNOG00000044937	GOT2 (ENSDNOG00000004957) ##22	SLC38A7 (ENSDNOG00000048905)	ENSDNOG00000038963	CNOT1 (ENSDNOG00000013250)	SETD6 (ENSDNOG00000013238)	GINS3 (ENSDNOG00000024402)	PRSS54 (ENSDNOG00000015196)	CCDC113 (ENSDNOG00000047490)	CSNK2A2 (ENSDNOG00000040840)	CFAP20 (ENSDNOG00000007477)	MMP15 (ENSDNOG00000049245)	ZNF319 (ENSDNOG00000042239)	TEPP (ENSDNOG00000023995)	ENSDNOG00000013005
Sloth	MODERN SPECIES	2125																GOT2 (ENSCHOG00000006501) ##22