Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000177554	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT00940000177666	ENSGT01100000263479.H.c.a.a.e.a ##26	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.D ##26	ENSGT01100000263479.H.d ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.H.d ##26	ENSGT01100000263479.H.c.a.a.e.a ##26	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h	ENSGT00940000160262
Perciformes	ANCESTRAL SPECIES	3	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.H.c.a.a.e.a ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h
Cottioidei	ANCESTRAL SPECIES	7	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h	ENSGT00940000160262	ENSGT00940000162179.e.a.b	ENSGT00940000164807.G.a.a.b
Stickleback	MODERN SPECIES	19	ino80e (ENSGACG00000009624) #7	ENSGACG00000009618 #8	vars1 (ENSGACG00000009601) #9	abhd16a (ENSGACG00000009564) #10	ENSGACG00000009560 #11	ENSGACG00000009524 #12	ENSGACG00000009520 #13	rabac1 (ENSGACG00000009485) #14	dedd1 (ENSGACG00000009481) #15	ENSGACG00000009471 #16	ERF (ENSGACG00000009467) #17	ENSGACG00000009452 #18	ENSGACG00000009451 #19	ZNF526 (ENSGACG00000009449) #20	gsk3ab (ENSGACG00000009447) #21	znf574 (ENSGACG00000009439) #22	GRIK5 (ENSGACG00000009427) #23	ENSGACG00000009425 #24	ENSGACG00000009423 #25	ENSGACG00000009412 #26	ENSGACG00000009407 #27	pafah1b3 (ENSGACG00000009368) #28	tlr21 (ENSGACG00000009364) #29	cnfn (ENSGACG00000009361) #30	rundc3b (ENSGACG00000009330) #31	abcb4 (ENSGACG00000009299) #32	crot (ENSGACG00000009281) #33	crot (ENSGACG00000009260) #34	rpp38 (ENSGACG00000009258) #35	nmt2 (ENSGACG00000009238) #36	FAM171A1 (ENSGACG00000009230) #37
Lumpfish	MODERN SPECIES	7	ino80e (ENSCLMG00005006649) #7	ENSCLMG00005006652 #8	vars1 (ENSCLMG00005006666) #9	abhd16a (ENSCLMG00005007856) #10	ENSCLMG00005009232	ENSCLMG00005009233 #11	ENSCLMG00005009247 #12	ENSCLMG00005013870	rabac1 (ENSCLMG00005013871) #14	dedd1 (ENSCLMG00005013872) #15	POU2F2 (ENSCLMG00005013873) #16	ENSCLMG00005013881 #17	ENSCLMG00005013884 #18	ZNF526 (ENSCLMG00005013913) #20	gsk3ab (ENSCLMG00005013919) #21	znf574 (ENSCLMG00005014158) #22	GRIK5 (ENSCLMG00005014159) #23	ENSCLMG00005014160 ##26	ENSCLMG00005014161 ##26	ENSCLMG00005014164	ENSCLMG00005014167 ##26	ENSCLMG00005014169 ##26	ENSCLMG00005014171 #26	pafah1b3 (ENSCLMG00005014175) #28	tlr21 (ENSCLMG00005014176) #29	cnfn (ENSCLMG00005014177) #30	cxcr3.2 (ENSCLMG00005014178)	cxcr3.3 (ENSCLMG00005014180)	CXCR3 (ENSCLMG00005014181)	trim35-28 (ENSCLMG00005014182)	ENSCLMG00005014188
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.H.c.a.a.e.a ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h
Channel bull blenny	MODERN SPECIES	7	ino80e (ENSCGOG00000004917) #7	ENSCGOG00000004924 #8	vars1 (ENSCGOG00000004968) #9	abhd16a (ENSCGOG00000006827) #10	ENSCGOG00000006919	ENSCGOG00000006922 #11	ENSCGOG00000006937 #12	ENSCGOG00000007631	rabac1 (ENSCGOG00000007632) #14	dedd1 (ENSCGOG00000007634) #15	POU2F2 (ENSCGOG00000007638) #16	ENSCGOG00000007650 ##17	ENSCGOG00000007663 #18	ENSCGOG00000007734 #20	gsk3ab (ENSCGOG00000007758) #21	znf574 (ENSCGOG00000008739) #22	grik5 (ENSCGOG00000008765) #23	ENSCGOG00000009619	ENSCGOG00000009622	ENSCGOG00000009627 ##26	ENSCGOG00000009658 ##26	ENSCGOG00000009665 ##26	ENSCGOG00000009669 #26	pafah1b3 (ENSCGOG00000009682) #28	ENSCGOG00000009701	tlr21 (ENSCGOG00000009705) #29	cnfn (ENSCGOG00000009707) #30	cxcr3.2 (ENSCGOG00000009727)	cxcr3.3 (ENSCGOG00000009732)	CXCR3 (ENSCGOG00000009741)	trim35-28 (ENSCGOG00000009747)
Pike perch	MODERN SPECIES	15	ENSSLUG00000024106	ino80e (ENSSLUG00000024114) #7	ENSSLUG00000024121 #8	vars1 (ENSSLUG00000024188) #9	abhd16a (ENSSLUG00000024689) #10	ENSSLUG00000024732	ENSSLUG00000024738 #11	ENSSLUG00000024859 #12	rabac1 (ENSSLUG00000025342) #14	dedd1 (ENSSLUG00000025343) #15	POU2F2 (ENSSLUG00000025348) #16	ERF (ENSSLUG00000025350) #17	ENSSLUG00000025358 #18	ENSSLUG00000025374 #20	gsk3ab (ENSSLUG00000025383) #21	znf574 (ENSSLUG00000025393) #22	GRIK5 (ENSSLUG00000025400) #23	ENSSLUG00000025407	ENSSLUG00000025414 ##26	ENSSLUG00000025420 ##26
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00990000213343	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a.e.a ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h	ENSGT00940000160262	ENSGT00940000162179.e.a.b
Gilthead seabream	MODERN SPECIES	8	ENSSAUG00010025282 #8	vars1 (ENSSAUG00010025296) #9	abhd16a (ENSSAUG00010025843) #10	ENSSAUG00010025852	ENSSAUG00010025860 #11	ENSSAUG00010025989 #12	ENSSAUG00010027263	rabac1 (ENSSAUG00010027265) #14	dedd1 (ENSSAUG00010027268) #15	ENSSAUG00010014944	ERF (ENSSAUG00010014962) #17	ENSSAUG00010014967 #18	ENSSAUG00010014974 #20	ENSSAUG00010014977	gsk3ab (ENSSAUG00010014980) #21	znf574 (ENSSAUG00010015061) #22	ENSSAUG00010015064	GRIK5 (ENSSAUG00010015085) #23	ENSSAUG00010015129	ENSSAUG00010015131 ##26	ENSSAUG00010015140 ##26	ENSSAUG00010015146 ##26	ENSSAUG00010015152 ##26	ENSSAUG00010015155 ##26	ENSSAUG00010015158 ##26	ENSSAUG00010015162 ##26	ENSSAUG00010015166 ##26	ENSSAUG00010015169 ##26	ENSSAUG00010015174 #26	pafah1b3 (ENSSAUG00010015175) #28	tlr21 (ENSSAUG00010015180) #29
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000177056.a	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000177554	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00990000213343	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a.e.a ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h	ENSGT00940000160262	ENSGT00940000162179.e.a.b
Large yellow croaker	MODERN SPECIES	488	vars1 (ENSLCRG00005017373) #9	abhd16a (ENSLCRG00005017356) #10	ENSLCRG00005017353	ENSLCRG00005017351	ENSLCRG00005017349 #11	ENSLCRG00005017348	ENSLCRG00005009657 #12	rabac1 (ENSLCRG00005009597) #14	dedd1 (ENSLCRG00005009594) #15	ENSLCRG00005009574 #16	ERF (ENSLCRG00005009568) #17	ENSLCRG00005009529 #18	ENSLCRG00005009526	ENSLCRG00005009525 #20	gsk3ab (ENSLCRG00005009414) #21	znf574 (ENSLCRG00005009393) #22	GRIK5 (ENSLCRG00005008415) #23	ENSLCRG00005008365 ##26	ENSLCRG00005008353	ENSLCRG00005008350	ENSLCRG00005008347	bsk146 (ENSLCRG00005008345)	ENSLCRG00005008344	ENSLCRG00005008189	dhrs7cb (ENSLCRG00005008185)	ENSLCRG00005008184	hs3st3l (ENSLCRG00005008183)	ENSLCRG00005008182	GLP2R (ENSLCRG00005008181)	PTS (ENSLCRG00005008180)	ENSLCRG00005008178
European seabass	MODERN SPECIES	6	ENSDLAG00005002885	ENSDLAG00005002808	ENSDLAG00005002717 #8	vars1 (ENSDLAG00005001978) #9	ENSDLAG00005001765	ENSDLAG00005001703 #11	ENSDLAG00005001178 #12	rabac1 (ENSDLAG00005001150) #14	dedd1 (ENSDLAG00005001141) #15	ENSDLAG00005001094 #16	ENSDLAG00005001087 #17	ENSDLAG00005035075 #18	ENSDLAG00005001022	ENSDLAG00005001017 #20	gsk3ab (ENSDLAG00005000993) #21	znf574 (ENSDLAG00005000982) #22	ENSDLAG00005000978	ENSDLAG00005000902 #23	ENSDLAG00005034004	ENSDLAG00005000848	ENSDLAG00005000831 ##26	ENSDLAG00005013446 #26	pafah1b3 (ENSDLAG00005000824) #28	tlr21 (ENSDLAG00005000820) #29	cxcr3.2 (ENSDLAG00005027937)	cxcr3.3 (ENSDLAG00005033844)	ENSDLAG00005032808	ENSDLAG00005000756	ENSDLAG00005000794	ENSDLAG00005000744	arhgef1b (ENSDLAG00005000640)
Ballan wrasse	MODERN SPECIES	149										POU2F2 (ENSLBEG00000011937) #16	ENSLBEG00000011911 ##17	ENSLBEG00000011897 #17	ENSLBEG00000011808 #18	ENSLBEG00000011751 #20	gsk3ab (ENSLBEG00000011727) #21	znf574 (ENSLBEG00000011670) #22	GRIK5 (ENSLBEG00000011569) #23	ENSLBEG00000011525	ENSLBEG00000011508	ENSLBEG00000011462 ##26	GRIK5 (ENSLBEG00000011326) ##23	ENSLBEG00000011270 ##26	ENSLBEG00000011250	ENSLBEG00000011236	ENSLBEG00000011210	ENSLBEG00000011145	ENSLBEG00000011091	ENSLBEG00000011067	ENSLBEG00000011040	ENSLBEG00000011028	ENSLBEG00000011006
Tetraodontidae	ANCESTRAL SPECIES	25	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b.c #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.H.d ##26	ENSGT01100000263479.H.c.a.a.e.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000164807.G.a.a.b	ENSGT00940000160262	ENSGT00940000162179.e.a.b	ENSGT00940000157292.gc ##17
Tetraodon	MODERN SPECIES	23	ENSTNIG00000008013	ino80e (ENSTNIG00000008012) #7	vars1 (ENSTNIG00000008011) #9	abhd16a (ENSTNIG00000008010) #10	ENSTNIG00000008009	ENSTNIG00000008008 #11	ENSTNIG00000001377	ENSTNIG00000008007 #12	rabac1 (ENSTNIG00000008006) #14	dedd1 (ENSTNIG00000008005) #15	POU2F2 (ENSTNIG00000008004) #16	ENSTNIG00000006052 #17	ENSTNIG00000003521 #18	ZNF526 (ENSTNIG00000003520) #20	gsk3ab (ENSTNIG00000003519) #21	znf574 (ENSTNIG00000003518) #22	GRIK5 (ENSTNIG00000005311) #23	ENSTNIG00000001728 ##26	ENSTNIG00000001432 ##26	ENSTNIG00000005310	rnf144b (ENSTNIG00000005309)	ENSTNIG00000000405	ENSTNIG00000005308	atp6v1c1a (ENSTNIG00000005307)	rida (ENSTNIG00000013296)	azin1a (ENSTNIG00000005306)	ubr5 (ENSTNIG00000013292)	ENSTNIG00000013293	ENSTNIG00000013294	MATN2 (ENSTNIG00000013295)	POP1 (ENSTNIG00000013297)
Fugu	MODERN SPECIES	19	ENSTRUG00000020209 #8	vars1 (ENSTRUG00000012307) #9	abhd16a (ENSTRUG00000002440) #10	ENSTRUG00000022250	ENSTRUG00000012546 #11	ENSTRUG00000029247 #11	ENSTRUG00000008243 #12	rabac1 (ENSTRUG00000008124) #14	dedd1 (ENSTRUG00000007969) #15	POU2F2 (ENSTRUG00000007484) #16	ERF (ENSTRUG00000022541) #17	ENSTRUG00000007193 #18	ENSTRUG00000006695 #20	ENSTRUG00000030165	gsk3ab (ENSTRUG00000006315) #21	znf574 (ENSTRUG00000006262) #22	GRIK5 (ENSTRUG00000005275) #23	ENSTRUG00000004930	ENSTRUG00000004675 #26	ENSTRUG00000029123	pafah1b3 (ENSTRUG00000023793) #28	ENSTRUG00000021730	tlr21 (ENSTRUG00000004103) #29	cxcr3.2 (ENSTRUG00000003961)	cxcr3.3 (ENSTRUG00000027195)	CXCR3 (ENSTRUG00000031111)	trim35-28 (ENSTRUG00000001917)	ENSTRUG00000027387	ENSTRUG00000031574	ENSTRUG00000024470	arhgef1b (ENSTRUG00000026663)
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000177554	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00940000163587.b	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262	ENSGT00950000182774.b.a.b.a.a	ENSGT00940000163212.B	ENSGT00940000161180
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00940000163587.b	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.E ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262	ENSGT00950000182774.b.a.b.a.a	ENSGT00940000163212.B	ENSGT00940000161180	ENSGT00940000154363.A
Climbing perch	MODERN SPECIES	7	ENSATEG00000020296 #8	vars1 (ENSATEG00000020219) #9	abhd16a (ENSATEG00000028859) #10	ENSATEG00000020101	ENSATEG00000020083	ENSATEG00000020055 #11	ENSATEG00000020020	ENSATEG00000019917 #12	rabac1 (ENSATEG00000019902) #14	dedd1 (ENSATEG00000019888) #15	ENSATEG00000019821 #16	ENSATEG00000019806 #17	ENSATEG00000019726 #18	ZNF526 (ENSATEG00000019718) #20	gsk3ab (ENSATEG00000019676) #21	znf574 (ENSATEG00000019636) #22	ENSATEG00000019579 #23	ENSATEG00000019244 ##26	ENSATEG00000029413 ##26	ENSATEG00000019173 #26	pafah1b3 (ENSATEG00000026654) #28	tlr21 (ENSATEG00000019150) #29	cnfn (ENSATEG00000019143) #30	cxcr3.2 (ENSATEG00000019139)	cxcr3.3 (ENSATEG00000028818)	ENSATEG00000019129	ENSATEG00000029031	ENSATEG00000018991	ENSATEG00000018979	ENSATEG00000018964	arhgef1b (ENSATEG00000018901)
Siamese fighting fish	MODERN SPECIES	7	ENSBSLG00000009900	ino80e (ENSBSLG00000009879) #7	ENSBSLG00000009867 #8	vars1 (ENSBSLG00000008128) #9	abhd16a (ENSBSLG00000007876) #10	ENSBSLG00000007769	ENSBSLG00000007741 #11	ENSBSLG00000007478 #12	rabac1 (ENSBSLG00000007423) #14	dedd1 (ENSBSLG00000007414) #15	POU2F2 (ENSBSLG00000007368) #16	ERF (ENSBSLG00000007352) #17	ENSBSLG00000007263 #18	ENSBSLG00000007248 #20	gsk3ab (ENSBSLG00000006727) #21	znf574 (ENSBSLG00000006312) #22	GRIK5 (ENSBSLG00000005670) #23	ENSBSLG00000005562 ##26	ENSBSLG00000005532 ##26	ENSBSLG00000005477 ##26	ENSBSLG00000005099 ##26	ENSBSLG00000005054	ENSBSLG00000004977 ##26	ENSBSLG00000004916 ##26	ENSBSLG00000004870 #26	pafah1b3 (ENSBSLG00000004785) #28	tlr21 (ENSBSLG00000004315) #29	cnfn (ENSBSLG00000004313) #30	cxcr3.2 (ENSBSLG00000004311)	cxcr3.3 (ENSBSLG00000004309)	CXCR3 (ENSBSLG00000004305)
Zig-zag eel	MODERN SPECIES	7	ino80e (ENSMAMG00000003894) #7	ENSMAMG00000025661 #8	vars1 (ENSMAMG00000003949) #9	abhd16a (ENSMAMG00000004141) #10	ENSMAMG00000004239	ENSMAMG00000004282 #11	ENSMAMG00000004305 #12	rabac1 (ENSMAMG00000004422) #14	dedd1 (ENSMAMG00000004448) #15	ENSMAMG00000004475	ENSMAMG00000004493 #16	ENSMAMG00000004553 #17	ENSMAMG00000004571 #18	ENSMAMG00000004684 #20	gsk3ab (ENSMAMG00000004699) #21	znf574 (ENSMAMG00000004742) #22	ENSMAMG00000004762 #23	ENSMAMG00000004816	ENSMAMG00000004832 ##26	ENSMAMG00000004846 #26	pafah1b3 (ENSMAMG00000004876) #28	tlr21 (ENSMAMG00000004934) #29	cnfn (ENSMAMG00000004938) #30	cxcr3.2 (ENSMAMG00000004964)	cxcr3.3 (ENSMAMG00000004967)	ENSMAMG00000004978	ENSMAMG00000004985	ENSMAMG00000004994	ENSMAMG00000005072	ENSMAMG00000005078 ##17	arhgef1b (ENSMAMG00000005107)
Carangaria	ANCESTRAL SPECIES	1	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a.m.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000177554	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.e.a ##26	ENSGT01100000263479.H.d ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Carangaria_A	ANCESTRAL SPECIES	9	ENSGT00530000067342 #8	ENSGT00940000165364.a.a.m.b #11	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a.m.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.e.a ##26	ENSGT01100000263479.H.d ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Seriola	ANCESTRAL SPECIES	28	ENSGT00530000067342 #8	ENSGT00940000165364.a.a.m.b #11	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a.m.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26
Greater amberjack	MODERN SPECIES	88	ENSSDUG00000014150 #8	ENSSDUG00000014158 #11	vars1 (ENSSDUG00000014177) #9	abhd16a (ENSSDUG00000014250) #10	ENSSDUG00000014313	ENSSDUG00000014325 #11	ENSSDUG00000014356 #12	ENSSDUG00000014417	rabac1 (ENSSDUG00000014425) #14	dedd1 (ENSSDUG00000014440) #15	ENSSDUG00000014476 #16	ERF (ENSSDUG00000014506) #17	ENSSDUG00000014523 #18	ENSSDUG00000014574 #20	gsk3ab (ENSSDUG00000014593) #21	znf574 (ENSSDUG00000014609) #22	GRIK5 (ENSSDUG00000014634) #23	ENSSDUG00000014671 ##26
Yellowtail amberjack	MODERN SPECIES	3188		ENSSLDG00000025325 #11	vars1 (ENSSLDG00000025316) #9	abhd16a (ENSSLDG00000025306) #10	ENSSLDG00000025303	ENSSLDG00000025301 #11	ENSSLDG00000025300	ENSSLDG00000025289 #12	rabac1 (ENSSLDG00000025287) #14	dedd1 (ENSSLDG00000025284) #15	POU2F2 (ENSSLDG00000025282) #16	ERF (ENSSLDG00000025278) #17	ENSSLDG00000025267 #18	ENSSLDG00000025265 #20	gsk3ab (ENSSLDG00000025257) #21	znf574 (ENSSLDG00000025250) #22	GRIK5 (ENSSLDG00000025230) #23	ENSSLDG00000025221	ENSSLDG00000025218 ##26
Barramundi perch	MODERN SPECIES	161	ENSLCAG00010004379 #8	ENSLCAG00010004370 #11	vars1 (ENSLCAG00010003374) #9	abhd16a (ENSLCAG00010003106) #10	ENSLCAG00010003080	ENSLCAG00010003077 #11	ENSLCAG00010003072	ENSLCAG00010000131 #12	rabac1 (ENSLCAG00010000130) #14	dedd1 (ENSLCAG00010000129) #15	POU2F2 (ENSLCAG00010000128) #16	ENSLCAG00010000127 #17	ENSLCAG00010000126 #18	ENSLCAG00010000125 #20	gsk3ab (ENSLCAG00010000124) #21	znf574 (ENSLCAG00010000123) #22	GRIK5 (ENSLCAG00010000122) #23	ENSLCAG00010000120	ENSLCAG00010000119 ##26	ENSLCAG00010000118 ##26	ENSLCAG00010000117 ##26	ENSLCAG00010000116 ##26	ENSLCAG00010000115 ##26	ENSLCAG00010000114 ##26	ENSLCAG00010000113 ##26	ENSLCAG00010000111 #26	pafah1b3 (ENSLCAG00010000110) #28	tlr21 (ENSLCAG00010000109) #29	cnfn (ENSLCAG00010000108) #30	cxcr3.2 (ENSLCAG00010000107)	cxcr3.3 (ENSLCAG00010000106)
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a.m.a #11	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000177554	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.H.c.a.a.e.a ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262	ENSGT00950000182774.b.a.b.a.a	ENSGT00940000164807.G.a.a.b	ENSGT00940000163212.B
Tongue sole	MODERN SPECIES	4	ino80e (ENSCSEG00000019667) #7	ENSCSEG00000019662 #8	vars1 (ENSCSEG00000019652) #9	abhd16a (ENSCSEG00000019629) #10	ENSCSEG00000019617	ENSCSEG00000019610 #11	ENSCSEG00000019601 #12	rabac1 (ENSCSEG00000019595) #14	dedd1 (ENSCSEG00000019591) #15	POU2F2 (ENSCSEG00000019584) #16	ERF (ENSCSEG00000019582) #17	ENSCSEG00000019560 #18	ENSCSEG00000019554	ZNF526 (ENSCSEG00000019528) #20	gsk3ab (ENSCSEG00000019516) #21	znf574 (ENSCSEG00000019510) #22	grik5 (ENSCSEG00000019375) #23	ENSCSEG00000019368	zgc:92606 (ENSCSEG00000019366)	ENSCSEG00000019353	ENSCSEG00000019340	trpv6 (ENSCSEG00000019206)	ENSCSEG00000019192	rab42b (ENSCSEG00000019183)	ENSCSEG00000019181	ctps1b (ENSCSEG00000019169)	cited4b (ENSCSEG00000019166)	SCMH1 (ENSCSEG00000019159)	ENSCSEG00000019155	ENSCSEG00000019153	med18 (ENSCSEG00000019149)
Turbot	MODERN SPECIES		ENSSMAG00000009777	ino80e (ENSSMAG00000009739) #7	ENSSMAG00000009693 #8	vars1 (ENSSMAG00000009596) #9	abhd16a (ENSSMAG00000009514) #10	ENSSMAG00000009488	ENSSMAG00000009455 #11	ENSSMAG00000009326 #12	rabac1 (ENSSMAG00000009295) #14	dedd1 (ENSSMAG00000009255) #15	ENSSMAG00000009157 #16	ENSSMAG00000009119 #17	ENSSMAG00000009033 #18	ENSSMAG00000009020 #20	gsk3ab (ENSSMAG00000008999) #21	znf574 (ENSSMAG00000008952) #22	grik5 (ENSSMAG00000008882) #23	ENSSMAG00000008795 ##26	ENSSMAG00000008754 ##26	ENSSMAG00000008719 #26	pafah1b3 (ENSSMAG00000008691) #28	tlr21 (ENSSMAG00000008689) #29	cnfn (ENSSMAG00000030112) #30	cxcr3.2 (ENSSMAG00000030929)	cxcr3.3 (ENSSMAG00000008640)	ENSSMAG00000027561	ENSSMAG00000008604	ENSSMAG00000008527	ENSSMAG00000036897	ENSSMAG00000008460	arhgef1b (ENSSMAG00000008420)
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT00940000177666	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Atherinomorphae	ANCESTRAL SPECIES		ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262	ENSGT00950000182774.b.a.b.a.a
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT00940000177666	ENSGT01100000263479.H.c.a.a.e.a.h.b.a.b ##26	ENSGT01100000263479.H.c.a.a.e.a.h.b.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Aplocheiloidei	ANCESTRAL SPECIES	2	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00970000196884.b	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a.e.a.h.b.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262	ENSGT01100000263491.a.b.a.a.a.a.b.r	ENSGT00940000157292.gc ##17
Mangrove rivulus	MODERN SPECIES	33	ino80e (ENSKMAG00000009417) #7	ENSKMAG00000009432 #8	vars1 (ENSKMAG00000009455) #9	abhd16a (ENSKMAG00000009561) #10	ENSKMAG00000009638	ENSKMAG00000009679 #11	ENSKMAG00000009734 #12	rabac1 (ENSKMAG00000009847) #14	dedd1 (ENSKMAG00000009886) #15	ENSKMAG00000009941	ERF (ENSKMAG00000010028) #17	ENSKMAG00000010054 #18	ENSKMAG00000010116	ENSKMAG00000010133 #20	gsk3ab (ENSKMAG00000010150) #21	znf574 (ENSKMAG00000010186) #22	GRIK5 (ENSKMAG00000010219) #23	ENSKMAG00000010263	ENSKMAG00000010305 ##26	ENSKMAG00000010394 ##26	ENSKMAG00000010465 #26	pafah1b3 (ENSKMAG00000010509) #28	ENSKMAG00000010537	tlr21 (ENSKMAG00000010548) #29	cnfn (ENSKMAG00000010566) #30	cxcr3.2 (ENSKMAG00000010579)	ENSKMAG00000010590	CXCR3 (ENSKMAG00000010605)	CXCR3 (ENSKMAG00000010623)	trim35-28 (ENSKMAG00000010647)	MEGF8 (ENSKMAG00000010690)
Turquoise killifish	MODERN SPECIES	1614	ENSNFUG00015002310	INO80E (ENSNFUG00015002314) #7	ENSNFUG00015002318	VARS (ENSNFUG00015002349) #9	ENSNFUG00015002588	PVRL2 (ENSNFUG00015002595) #11	ENSNFUG00015002612 #12	ENSNFUG00015002683	RABAC1 (ENSNFUG00015002686) #14	DEDD2 (ENSNFUG00015002697) #15	POU2F2 (ENSNFUG00015002703) #16	ENSNFUG00015002709	ENSNFUG00015002724 #18	ZNF526 (ENSNFUG00015002749) #20	GSK3AB (ENSNFUG00015002760) #21	znf574 (ENSNFUG00015002814) #22	GRIK5 (ENSNFUG00015002902) #23	ENSNFUG00015003097	ENSNFUG00015003103 ##26	ENSNFUG00015003110	ENSNFUG00015003117 ##26	ENSNFUG00015003130 ##26	ENSNFUG00015003140	ENSNFUG00015003147 #26	PAFAH1B3 (ENSNFUG00015003157) #28	tlr21 (ENSNFUG00015003168) #29	cnfn (ENSNFUG00015003173) #30	CXCR3.2 (ENSNFUG00015003180)	Nfu_g_1_001121 (ENSNFUG00015003185)	CXCR3 (ENSNFUG00015003187)	TRIM35-28 (ENSNFUG00015003193)
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.e.a.h.a ##26	ENSGT01100000263479.H.c.a.a.e.a.h.b.a.a ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f.c.b	ENSGT01050000244848.B.a.b.f.c.a	ENSGT01050000244848.B.a.b.f.d
NAME_4	ANCESTRAL SPECIES	1	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT00940000177666	ENSGT01100000263479.H.c.a.a.e.a.g.a ##26
Sheepshead minnow	MODERN SPECIES	1332												ENSCVAG00000015143 #17	ENSCVAG00000015136 #18	ENSCVAG00000015110 #20	gsk3ab (ENSCVAG00000015103) #21	znf574 (ENSCVAG00000015092) #22
Mummichog	MODERN SPECIES	2274	ENSFHEG00000010686 #8	vars1 (ENSFHEG00000010672) #9	abhd16a (ENSFHEG00000010472) #10	ENSFHEG00000010355	ENSFHEG00000010332 #11	ENSFHEG00000010295 #12	ENSFHEG00000010158	rabac1 (ENSFHEG00000010151) #14	dedd1 (ENSFHEG00000010142) #15	ENSFHEG00000010128	ENSFHEG00000010115 #16	ENSFHEG00000010107 #17	ENSFHEG00000000225 #18	ZNF574 (ENSFHEG00000010085)	gsk3ab (ENSFHEG00000010034) #21	znf574 (ENSFHEG00000010018) #22	GRIK5 (ENSFHEG00000009991) #23	ENSFHEG00000009929 ##26
Poeciliinae	ANCESTRAL SPECIES		ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.e.a.h.a ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f.c.b	ENSGT01050000244848.B.a.b.f.c.a	ENSGT01050000244848.B.a.b.f.d	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262
Poecilia	ANCESTRAL SPECIES		ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.e.a.h.a.b ##26	ENSGT01100000263479.H.c.a.a.e.a.h.b.a.a ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f.c.b	ENSGT01050000244848.B.a.b.f.c.a	ENSGT01050000244848.B.a.b.f.d	ENSGT01030000234583.a.a.c.a.a
NAME_6	ANCESTRAL SPECIES	24	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a.g #11	ENSGT00940000165364.a.a.h #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00940000177554	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.E ##26	ENSGT01100000263479.H.c.a.a.e.a.h.b.b ##26
Sailfin molly	MODERN SPECIES	1261												ENSPLAG00000001789 #18	ENSPLAG00000001754 #20	ENSPLAG00000001746	gsk3ab (ENSPLAG00000001739) #21	znf574 (ENSPLAG00000001720) #22	GRIK5 (ENSPLAG00000001700) #23
Amazon molly	MODERN SPECIES	286	ENSPFOG00000015682 #8	vars1 (ENSPFOG00000015690) #9	abhd16a (ENSPFOG00000015783) #10	ENSPFOG00000015828	ENSPFOG00000015850 #11	ENSPFOG00000015870 #11	ENSPFOG00000015883 #12	ENSPFOG00000016054 #13	rabac1 (ENSPFOG00000016055) #14	dedd1 (ENSPFOG00000016064) #15	ENSPFOG00000016074	ERF (ENSPFOG00000023850) #17	ENSPFOG00000016231 #18	ENSPFOG00000016258 #20	gsk3ab (ENSPFOG00000016170) #21	znf574 (ENSPFOG00000016263) #22	GRIK5 (ENSPFOG00000016273) #23	ENSPFOG00000023784 ##26	ENSPFOG00000016358 ##26	ENSPFOG00000024838 ##26	ENSPFOG00000016400 ##26
Guppy	MODERN SPECIES	446	ino80e (ENSPREG00000013188) #7	ENSPREG00000013220 #8	vars1 (ENSPREG00000013264) #9	abhd16a (ENSPREG00000013335) #10	ENSPREG00000013451	ENSPREG00000013495 #11	ENSPREG00000013522 #12	ENSPREG00000013567	rabac1 (ENSPREG00000013578) #14	dedd1 (ENSPREG00000013603) #15	ENSPREG00000013636	ERF (ENSPREG00000013694) #17	ENSPREG00000013757 #18	ENSPREG00000013836 #20	gsk3ab (ENSPREG00000013855) #21	znf574 (ENSPREG00000013888) #22	GRIK5 (ENSPREG00000013939) #23	ENSPREG00000013968 ##26	ENSPREG00000013999 ##26	ENSPREG00000014021 ##26	ENSPREG00000014031 ##26	ENSPREG00000014059 ##26	ENSPREG00000014093 ##26	ENSPREG00000014138 #26	pafah1b3 (ENSPREG00000014160) #28	cxcr3.3 (ENSPREG00000014182)	tlr21 (ENSPREG00000014195) #29	cnfn (ENSPREG00000014213) #30	cxcr3.2 (ENSPREG00000014218)	ENSPREG00000014225	CXCR3 (ENSPREG00000014237)
Platyfish	MODERN SPECIES	17	ino80e (ENSXMAG00000010963) #7	ENSXMAG00000010961 #8	vars1 (ENSXMAG00000010927) #9	abhd16a (ENSXMAG00000028465) #10	ENSXMAG00000010892	ENSXMAG00000022421 #11	ENSXMAG00000010837 #12	rabac1 (ENSXMAG00000010832) #14	dedd1 (ENSXMAG00000010827) #15	ENSXMAG00000010823 #16	ERF (ENSXMAG00000010816) #17	ENSXMAG00000028190 #18	ZNF526 (ENSXMAG00000010814) #20	ENSXMAG00000021247	gsk3ab (ENSXMAG00000010809) #21	znf574 (ENSXMAG00000010807) #22	GRIK5 (ENSXMAG00000010792) #23	ENSXMAG00000027785	ENSXMAG00000025791 ##26	ENSXMAG00000029163	ENSXMAG00000026547 ##26	ENSXMAG00000010791 ##26	ENSXMAG00000027323 #26	ENSXMAG00000010786 #26	pafah1b3 (ENSXMAG00000010774) #28	ENSXMAG00000028662	tlr21 (ENSXMAG00000010772) #29	cnfn (ENSXMAG00000010770) #30	cxcr3.2 (ENSXMAG00000006858)	cxcr3.3 (ENSXMAG00000006856)	ENSXMAG00000029646
Oryzias	ANCESTRAL SPECIES	2	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262	ENSGT00950000182774.b.a.b.a.a
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000161799	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778.c	ENSGT01100000263479.H.c.a.a.f.a ##26	ENSGT01030000234778.d	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f.b ##26	ENSGT00950000183199.a.b #28	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262	ENSGT00940000164807.G.a.a.b
Indian medaka	MODERN SPECIES	5	ino80e (ENSOMEG00000014887) #7	ENSOMEG00000014895 #8	vars1 (ENSOMEG00000015016) #9	abhd16a (ENSOMEG00000015125) #10	ENSOMEG00000015172	ENSOMEG00000015221 #11	ENSOMEG00000015242	ENSOMEG00000015304 #12	rabac1 (ENSOMEG00000015326) #14	dedd1 (ENSOMEG00000015383) #15	POU2F2 (ENSOMEG00000015477) #16	ERF (ENSOMEG00000015517) #17	ENSOMEG00000015577 #18	ZNF574 (ENSOMEG00000015611)	gsk3ab (ENSOMEG00000000943) #21	znf574 (ENSOMEG00000015669) #22	GRIK5 (ENSOMEG00000015786) #23	ENSOMEG00000015827	ENSOMEG00000015837	ENSOMEG00000015847	ENSOMEG00000015887 ##26	ENSOMEG00000015920 ##26	ENSOMEG00000015985 ##26	ENSOMEG00000016037 ##26	ENSOMEG00000016072 ##26	ENSOMEG00000016141	pafah1b3 (ENSOMEG00000016190) #28	tlr21 (ENSOMEG00000016214) #29	cxcr3.2 (ENSOMEG00000016226)	cnfn (ENSOMEG00000016247) #30	ENSOMEG00000016269
Javanese ricefish	MODERN SPECIES	7	ino80e (ENSOJAG00000015438) #7	ENSOJAG00000015446 #8	vars1 (ENSOJAG00000015493) #9	abhd16a (ENSOJAG00000016759) #10	ENSOJAG00000017016	ENSOJAG00000017200 #11	ENSOJAG00000017356 #12	ENSOJAG00000019188	rabac1 (ENSOJAG00000019200) #14	dedd1 (ENSOJAG00000019215) #15	POU2F2 (ENSOJAG00000019247) #16	ERF (ENSOJAG00000019256) #17	ENSOJAG00000019275 #18	ZNF574 (ENSOJAG00000019446)	gsk3ab (ENSOJAG00000019454) #21	znf574 (ENSOJAG00000019528) #22	GRIK5 (ENSOJAG00000019687) #23	ENSOJAG00000020294	ENSOJAG00000020311	ENSOJAG00000020323 ##26	ENSOJAG00000020348 ##26	ENSOJAG00000020380 ##26	pafah1b3 (ENSOJAG00000020513) #28	tlr21 (ENSOJAG00000020516) #29	cnfn (ENSOJAG00000020519) #30	cxcr3.2 (ENSOJAG00000020523)	cxcr3.3 (ENSOJAG00000020524)	CXCR3 (ENSOJAG00000020528)	trim35-28 (ENSOJAG00000020531)	MEGF8 (ENSOJAG00000020538)	ENSOJAG00000020567
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00940000163587.b	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778.e.a	ENSGT01030000234778.f	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f.g	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262
Japanese Medaka HdrR	MODERN SPECIES	7	ENSORLG00000013023 #8	vars1 (ENSORLG00000013063) #9	abhd16a (ENSORLG00000013112) #10	g6fl (ENSORLG00000022733)	ENSORLG00000013133 #11	ENSORLG00000013191 #12	rabac1 (ENSORLG00000013202) #14	dedd1 (ENSORLG00000013218) #15	dedd1 (ENSORLG00000026809) #15	POU2F2 (ENSORLG00000013228) #16	ERF (ENSORLG00000023273) #17	ENSORLG00000013259 #18	ZNF574 (ENSORLG00000013290)	ENSORLG00000030079	gsk3ab (ENSORLG00000013330) #21	znf574 (ENSORLG00000013344) #22	GRIK5 (ENSORLG00000013374) #23	ENSORLG00000024119	ENSORLG00000027323	ENSORLG00000024791 ##26	ENSORLG00000023372 ##26	ENSORLG00000013389 #26	pafah1b3 (ENSORLG00000028084) #28	ENSORLG00000024080	tlr21 (ENSORLG00000013437) #29	ENSORLG00000013448	cxcr3.2 (ENSORLG00000013459)	cxcr3.3 (ENSORLG00000022397)	ENSORLG00000013488	ENSORLG00000013468	ENSORLG00000023772
Chinese medaka	MODERN SPECIES	467	ENSOSIG00000005259	ENSOSIG00000005260	ino80e (ENSOSIG00000005261) #7	ENSOSIG00000005262 #8	abhd16a (ENSOSIG00000005524) #10	ENSOSIG00000005535	ENSOSIG00000005536 #11	ENSOSIG00000005652 #12	rabac1 (ENSOSIG00000014878) #14	dedd1 (ENSOSIG00000014887) #15	POU2F2 (ENSOSIG00000014900) #16	ERF (ENSOSIG00000014913) #17	ENSOSIG00000014916 #18	ENSOSIG00000014918 #20	gsk3ab (ENSOSIG00000014929) #21	znf574 (ENSOSIG00000015034) #22	GRIK5 (ENSOSIG00000015051) #23
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000177554	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT00940000177666	ENSGT01100000263479.E ##26	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f
Pomacentridae	ANCESTRAL SPECIES	35	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000177554	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT00940000177666	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262
Pomacentridae_A	ANCESTRAL SPECIES	16	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000177554	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT00940000177666	ENSGT01100000263479.H.c.a.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262
Amphiprion	ANCESTRAL SPECIES	1	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000179553	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000177554	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.E ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262
Orange clownfish	MODERN SPECIES	21	vars1 (ENSAPEG00000010638) #9	abhd16a (ENSAPEG00000010611) #10	ENSAPEG00000010588	ENSAPEG00000010560 #11	ENSAPEG00000010483 #12	ENSAPEG00000010465	ENSAPEG00000010390 #12	rabac1 (ENSAPEG00000010344) #14	dedd1 (ENSAPEG00000010321) #15	POU2F2 (ENSAPEG00000010280) #16	ENSAPEG00000010268 #17	ENSAPEG00000010171 #18	ENSAPEG00000010144	ENSAPEG00000010134 #20	gsk3ab (ENSAPEG00000010112) #21	znf574 (ENSAPEG00000010055) #22	GRIK5 (ENSAPEG00000009966) #23	ENSAPEG00000009941	ENSAPEG00000009916 ##26	ENSAPEG00000009905 ##26	ENSAPEG00000009842 #26	pafah1b3 (ENSAPEG00000009798) #28	ENSAPEG00000009773	tlr21 (ENSAPEG00000009767) #29	cnfn (ENSAPEG00000009758) #30	cxcr3.2 (ENSAPEG00000009750)	cxcr3.3 (ENSAPEG00000009742)	CXCR3 (ENSAPEG00000009736)	trim35-28 (ENSAPEG00000009729)	MEGF8 (ENSAPEG00000009579)	ENSAPEG00000009533
Clown anemonefish	MODERN SPECIES	1300	JPH1 (ENSAOCG00000013282)	eloca (ENSAOCG00000013291)	ube2wa (ENSAOCG00000013312)	stau2 (ENSAOCG00000013358)	rdh10a (ENSAOCG00000013387)	rpl7 (ENSAOCG00000013452)	ENSAOCG00000013516 #12	rabac1 (ENSAOCG00000002535) #14	dedd1 (ENSAOCG00000013551) #15	ENSAOCG00000013575	POU2F2 (ENSAOCG00000013596) #16	ENSAOCG00000013613 #17	ENSAOCG00000013637 #18	ENSAOCG00000013652 #20	gsk3ab (ENSAOCG00000013659) #21	znf574 (ENSAOCG00000013726) #22	GRIK5 (ENSAOCG00000013789) #23
Spiny chromis	MODERN SPECIES	1053					abhd16a (ENSAPOG00000006375) #10	ENSAPOG00000006397	ENSAPOG00000006436 #11	ENSAPOG00000006537 #12	rabac1 (ENSAPOG00000006574) #14	dedd1 (ENSAPOG00000006587) #15	POU2F2 (ENSAPOG00000006627) #16	ERF (ENSAPOG00000006648) #17	ENSAPOG00000006774 #18	ENSAPOG00000000831 #20	gsk3ab (ENSAPOG00000006797) #21	znf574 (ENSAPOG00000006841) #22
Bicolor damselfish	MODERN SPECIES	829											POU2F2 (ENSSPAG00000023104) #16	ERF (ENSSPAG00000023124) #17	ENSSPAG00000023127 #18	ENSSPAG00000023136 #20	gsk3ab (ENSSPAG00000023137) #21	znf574 (ENSSPAG00000023141) #22	GRIK5 (ENSSPAG00000023143) #23	ENSSPAG00000000040 ##26
Cichlidae	ANCESTRAL SPECIES	9	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262	ENSGT01100000263491.a.b.a.a.a.a.b.r
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778.a.a.a.a	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.a ##26	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b	ENSGT01050000244848.B.a.b.f.l	ENSGT01050000244848.B.a.b.f.k.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00940000177056.a	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01030000234778.a.a.a.a	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.e.b ##26	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b	ENSGT01050000244848.B.a.b.e.f	ENSGT01050000244848.B.a.b.f.l
Haplochromini	ANCESTRAL SPECIES	6	ENSGT00940000163587.b	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b ##26	ENSGT01100000263479.H.c.a.a.f.i ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b.b	ENSGT01050000244848.B.a.b.e.f	ENSGT01050000244848.B.a.b.f.l	ENSGT01050000244848.B.a.b.f.k.a
Haplochromini_A	ANCESTRAL SPECIES	18	ENSGT00940000163587.b	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b ##26	ENSGT01100000263479.H.c.a.a.f.i ##26	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b.b	ENSGT01050000244848.B.a.b.e.f	ENSGT01050000244848.B.a.b.f.l	ENSGT01050000244848.B.a.b.f.k.a
Haplochromini_B	ANCESTRAL SPECIES	6	ENSGT00940000163587.b	ENSGT00390000011918 #7	ENSGT00530000067342 #8	ENSGT00940000157775 #9	ENSGT00940000160908 #10	ENSGT00990000203786	ENSGT00940000165364.a.a #11	ENSGT00940000165134.a.b #12	ENSGT00390000010549 #14	ENSGT00390000008714.b #15	ENSGT00940000160115.a.a #16	ENSGT00940000157292.fc.b #17	ENSGT00940000159960.d #18	ENSGT00940000162624 #20	ENSGT00520000055635.c.b.b #21	ENSGT00940000166708 #22	ENSGT00940000158852.e.a #23	ENSGT01100000263479.H.c.b ##26	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b.b ##26	ENSGT00940000178748	ENSGT01100000263479.G #26	ENSGT00950000183199.a.b #28	ENSGT00940000177028	ENSGT00940000163576 #29	ENSGT00940000161202 #30	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b.b	ENSGT01050000244848.B.a.b.e.e.b.a	ENSGT01050000244848.B.a.b.e.f	ENSGT01050000244848.B.a.b.f.l
Eastern happy	MODERN SPECIES	2	ino80e (ENSACLG00000025667) #7	ENSACLG00000025689 #8	vars1 (ENSACLG00000025699) #9	abhd16a (ENSACLG00000025756) #10	ENSACLG00000025805	ENSACLG00000025827 #11	ENSACLG00000025852 #12	rabac1 (ENSACLG00000025956) #14	dedd1 (ENSACLG00000025983) #15	ENSACLG00000025997 #16	ENSACLG00000026069 #17	ENSACLG00000026077 #18	ZNF526 (ENSACLG00000026103) #20	gsk3ab (ENSACLG00000026113) #21	ENSACLG00000026120	znf574 (ENSACLG00000026124) #22	GRIK5 (ENSACLG00000026152) #23	ENSACLG00000026217 ##26	ENSACLG00000026247 ##26	ENSACLG00000026285 ##26	ENSACLG00000026328	ENSACLG00000026333 #26	pafah1b3 (ENSACLG00000026347) #28	ENSACLG00000026366	tlr21 (ENSACLG00000026373) #29	cnfn (ENSACLG00000026377) #30	cxcr3.2 (ENSACLG00000026384)	ENSACLG00000026394	cxcr3.3 (ENSACLG00000026405)	cxcr3.3 (ENSACLG00000026410)	CXCR3 (ENSACLG00000026417)
Zebra mbuna	MODERN SPECIES	1093	ENSMZEG00005018294	ino80e (ENSMZEG00005018301) #7	ENSMZEG00005018309 #8	vars1 (ENSMZEG00005018327) #9	abhd16a (ENSMZEG00005018365) #10	ENSMZEG00005018375	ENSMZEG00005018381 #11	ENSMZEG00005018388 #12	rabac1 (ENSMZEG00005018411) #14	dedd1 (ENSMZEG00005018417) #15	POU2F2 (ENSMZEG00005018423) #16	ENSMZEG00005018431 #17	ENSMZEG00005018437 #18	ZNF526 (ENSMZEG00005018444) #20	gsk3ab (ENSMZEG00005018449) #21	znf574 (ENSMZEG00005000114) #22	GRIK5 (ENSMZEG00005000191) #23	ENSMZEG00005000311	ENSMZEG00005000346 ##26	ENSMZEG00005000500 ##26	ENSMZEG00005000584 ##26	ENSMZEG00005000636	ENSMZEG00005000774 ##26	ENSMZEG00005001779 ##26	ENSMZEG00005002140	ENSMZEG00005002162 #26	pafah1b3 (ENSMZEG00005002174) #28	ENSMZEG00005002190	tlr21 (ENSMZEG00005002209) #29	cnfn (ENSMZEG00005002655) #30	cxcr3.2 (ENSMZEG00005002660)
P. nyererei	MODERN SPECIES	340	ENSPNYG00000022557	ino80e (ENSPNYG00000022546) #7	ENSPNYG00000022535 #8	vars1 (ENSPNYG00000022511) #9	abhd16a (ENSPNYG00000022491) #10	ENSPNYG00000022474	ENSPNYG00000022465 #11	ENSPNYG00000022440 #12	rabac1 (ENSPNYG00000022415) #14	dedd1 (ENSPNYG00000022404) #15	POU2F2 (ENSPNYG00000022400) #16	ENSPNYG00000022390 #17	ENSPNYG00000022357 #18	ZNF526 (ENSPNYG00000022345) #20	gsk3ab (ENSPNYG00000022336) #21	znf574 (ENSPNYG00000022327) #22	GRIK5 (ENSPNYG00000022315) #23	ENSPNYG00000022308	ENSPNYG00000022302 ##26	ENSPNYG00000022297 ##26	ENSPNYG00000022292	ENSPNYG00000022288 ##26
Burton s mouthbrooder	MODERN SPECIES	338	ENSHBUG00000017041	ino80e (ENSHBUG00000017047) #7	ENSHBUG00000017086 #8	vars1 (ENSHBUG00000017151) #9	abhd16a (ENSHBUG00000017246) #10	ENSHBUG00000017262	ENSHBUG00000017278 #11	ENSHBUG00000017381 #12	rabac1 (ENSHBUG00000017395) #14	dedd1 (ENSHBUG00000017411) #15	POU2F2 (ENSHBUG00000017464) #16	ERF (ENSHBUG00000017480) #17	ENSHBUG00000017524 #18	ZNF526 (ENSHBUG00000017542) #20	gsk3ab (ENSHBUG00000017570) #21	znf574 (ENSHBUG00000017622) #22	GRIK5 (ENSHBUG00000017741) #23	ENSHBUG00000017766
Lyretail cichlid	MODERN SPECIES	386	ino80e (ENSNBRG00000020630) #7	ENSNBRG00000020615 #8	vars1 (ENSNBRG00000020520) #9	abhd16a (ENSNBRG00000020472) #10	ENSNBRG00000020440	ENSNBRG00000020430 #11	ENSNBRG00000020419	ENSNBRG00000020364 #12	rabac1 (ENSNBRG00000020348) #14	dedd1 (ENSNBRG00000020342) #15	ENSNBRG00000020286 #16	ERF (ENSNBRG00000020271) #17	ENSNBRG00000020200 #18	ZNF526 (ENSNBRG00000020159) #20	gsk3ab (ENSNBRG00000020141) #21	znf574 (ENSNBRG00000020102) #22	GRIK5 (ENSNBRG00000020073) #23	ENSNBRG00000020064	ENSNBRG00000020052 ##26	ENSNBRG00000020047	ENSNBRG00000020030	ENSNBRG00000020020	ENSNBRG00000020007 ##26
Nile tilapia	MODERN SPECIES	2	ENSONIG00000034064	ino80e (ENSONIG00000036631) #7	ENSONIG00000041521 #8	vars1 (ENSONIG00000013064) #9	abhd16a (ENSONIG00000033573) #10	ENSONIG00000013069	ENSONIG00000013078 #11	ENSONIG00000013081 #12	rabac1 (ENSONIG00000013101) #14	dedd1 (ENSONIG00000013103) #15	ENSONIG00000013106 #16	ERF (ENSONIG00000030500) #17	ENSONIG00000013108 #18	ENSONIG00000013111 #20	gsk3ab (ENSONIG00000039856) #21	znf574 (ENSONIG00000013113) #22	GRIK5 (ENSONIG00000013114) #23	ENSONIG00000037846	ENSONIG00000036740	ENSONIG00000042288 ##26	ENSONIG00000013123 ##26	ENSONIG00000027857 ##26	ENSONIG00000013122 ##26	ENSONIG00000013128 ##26	ENSONIG00000037954 ##26	ENSONIG00000013127 ##26	ENSONIG00000013126 ##26	ENSONIG00000011464 #26	pafah1b3 (ENSONIG00000011461) #28	cnfn (ENSONIG00000035573) #30	cxcr3.2 (ENSONIG00000011458)
Midas cichlid	MODERN SPECIES	1183	ino80e (ENSACIG00000013722) #7	ENSACIG00000013732 #8	vars1 (ENSACIG00000013752) #9	abhd16a (ENSACIG00000013811) #10	ENSACIG00000013938	ENSACIG00000013964 #11	ENSACIG00000014022 #12	ENSACIG00000014081	rabac1 (ENSACIG00000014089) #14	dedd1 (ENSACIG00000014144) #15	ENSACIG00000014171 #16	ERF (ENSACIG00000014200) #17	ENSACIG00000014222 #18	ZNF526 (ENSACIG00000014282) #20	gsk3ab (ENSACIG00000014333) #21	znf574 (ENSACIG00000014563) #22	GRIK5 (ENSACIG00000014592) #23	ENSACIG00000014628	ENSACIG00000014639