Murinae	ANCESTRAL SPECIES	5	ENSGT00940000156542 #8	ENSGT00940000158860 #9	ENSGT00940000158161 #10	ENSGT00940000158411 #11	ENSGT00390000006247.tc #12	ENSGT00940000161331 #13	ENSGT00940000162710 #14	ENSGT00940000159534 #15	ENSGT00940000158688 #16	ENSGT01050000248434	ENSGT00940000160210 #17	ENSGT00940000163100.b #18	ENSGT00940000159669 #19	ENSGT00390000017353 #20	ENSGT01030000234578.B.b #21	ENSGT00950000183117.a.b #22	ENSGT00950000182931.A #23	ENSGT00940000154557.c.a.d.b #24	ENSGT00940000154557.c.a.d.a.a #25	ENSGT00940000154557.c.a.c #27	ENSGT00940000154557.c.a.d.a.b #28	ENSGT00390000001017 #29	ENSGT00940000162223 #30	ENSGT00390000010711 #31	ENSGT00390000001958 #32	ENSGT00390000015005 #33	ENSGT00930000151073 #34	ENSGT01030000234555.a.a.b.a.b.a #35	ENSGT00940000160251 #36	ENSGT00530000063849.B #37	ENSGT00940000158400
Mus	ANCESTRAL SPECIES	7	ENSGT00940000158860 #9	ENSGT00940000158161 #10	ENSGT00940000158411 #11	ENSGT00390000006247.tc #12	ENSGT00940000161331 #13	ENSGT00860000136224	ENSGT00940000162710 #14	ENSGT00940000159534 #15	ENSGT00940000158688 #16	ENSGT01050000248434	ENSGT00940000160210 #17	ENSGT00940000163100.b #18	ENSGT00940000159669 #19	ENSGT00390000017353 #20	ENSGT01030000234578.B.b #21	ENSGT00950000183117.a.b #22	ENSGT00950000182931.A #23	ENSGT00940000154557.c.a.d.b #24	ENSGT00940000154557.c.a.d.a.a #25	ENSGT00940000154557.c.a.c #27	ENSGT00940000154557.c.a.d.a.b #28	ENSGT00390000001017 #29	ENSGT00940000162223 #30	ENSGT00390000010711 #31	ENSGT00390000001958 #32	ENSGT00390000015005 #33	ENSGT00930000151073 #34	ENSGT01030000234555.a.a.b.a.b.a #35	ENSGT00940000160251 #36	ENSGT00530000063849.B #37	ENSGT00940000158400
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000158860 #9	ENSGT00940000158161 #10	ENSGT00940000158411 #11	ENSGT00390000006247.tc #12	ENSGT00940000161331 #13	ENSGT00860000136224	ENSGT00940000162710 #14	ENSGT00940000159534 #15	ENSGT00940000158688 #16	ENSGT01050000248434	ENSGT00940000160210 #17	ENSGT00940000163100.b #18	ENSGT00940000159669 #19	ENSGT00390000017353 #20	ENSGT01030000234578.B.b #21	ENSGT00950000183117.a.b #22	ENSGT00950000182931.A #23	ENSGT00940000154557.c.a.d.b #24	ENSGT00940000154557.c.a.d.a.a #25	ENSGT00940000154557.c.a.c #27	ENSGT00940000154557.c.a.d.a.b #28	ENSGT00390000001017 #29	ENSGT00940000162223 #30	ENSGT00390000010711 #31	ENSGT00390000001958 #32	ENSGT00390000015005 #33	ENSGT00930000151073 #34	ENSGT01030000234555.a.a.b.a.b.a #35	ENSGT00940000160251 #36	ENSGT00530000063849.B #37	ENSGT00940000158400
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000158860 #9	ENSGT00940000158161 #10	ENSGT00940000158411 #11	ENSGT00390000006247.tc #12	ENSGT00940000161331 #13	ENSGT00860000136224	ENSGT00940000162710 #14	ENSGT00940000159534 #15	ENSGT00940000158688 #16	ENSGT01050000248434	ENSGT00940000160210 #17	ENSGT00940000163100.b #18	ENSGT00940000159669 #19	ENSGT00390000017353 #20	ENSGT01030000234578.B.b #21	ENSGT00950000183117.a.b #22	ENSGT00950000182931.A #23	ENSGT00940000154557.c.a.d.b #24	ENSGT00940000154557.c.a.d.a.a.d #25	ENSGT00940000154557.c.a.d.a.a.c.a #26	ENSGT00940000154557.c.a.c #27	ENSGT00940000154557.c.a.d.a.b #28	ENSGT00390000001017 #29	ENSGT00940000162223 #30	ENSGT00390000010711 #31	ENSGT00390000001958 #32	ENSGT00390000015005 #33	ENSGT00930000151073 #34	ENSGT01030000234555.a.a.b.a.b.a #35	ENSGT00940000160251 #36	ENSGT00530000063849.B #37
Mouse	MODERN SPECIES	12	Ubl4b (ENSMUSG00000055891) #7	Slc6a17 (ENSMUSG00000027894) #8	Kcnc4 (ENSMUSG00000027895) #9	Rbm15 (ENSMUSG00000048109) #10	Slc16a4 (ENSMUSG00000027896) #11	Lamtor5 (ENSMUSG00000087260) #12	Prok1 (ENSMUSG00000070368) #13	Cym (ENSMUSG00000046213) #14	Kcna10 (ENSMUSG00000042861) #15	Kcna2 (ENSMUSG00000040724) #16	Kcna3 (ENSMUSG00000047959) #17	Or11i1 (ENSMUSG00000043529) #18	Cd53 (ENSMUSG00000040747) #19	Lrif1 (ENSMUSG00000056260) #20	Dram2 (ENSMUSG00000027900) #21	Cept1 (ENSMUSG00000040774) #22	Dennd2d (ENSMUSG00000027901) #23	Chil6 (ENSMUSG00000027902) #24	Chil4 (ENSMUSG00000063779) #25	Chil3 (ENSMUSG00000040809) #26	Chia1 (ENSMUSG00000062778) #27	Chil5 (ENSMUSG00000043873) #28	Pifo (ENSMUSG00000010136) #29	Ovgp1 (ENSMUSG00000074340) #30	Wdr77 (ENSMUSG00000000561) #31	Atp5pb (ENSMUSG00000000563) #32	I830077J02Rik (ENSMUSG00000074342) #33	Tmigd3 (ENSMUSG00000074344) #34	Adora3 (ENSMUSG00000000562) #35	Rap1a (ENSMUSG00000068798) #36	Inka2 (ENSMUSG00000048458) #37
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000158860 #9	ENSGT00940000158161 #10	ENSGT00940000158411 #11	ENSGT00390000006247.tc #12	ENSGT00940000161331 #13	ENSGT00860000136224	ENSGT00940000162710 #14	ENSGT00940000159534 #15	ENSGT00940000158688 #16	ENSGT01050000248434	ENSGT00940000160210 #17	ENSGT00940000163100.b #18	ENSGT00940000159669 #19	ENSGT00390000017353 #20	ENSGT01030000234578.B.b #21	ENSGT00950000183117.a.b #22	ENSGT00950000182931.A #23	ENSGT00940000154557.c.a.d.b #24	ENSGT00940000154557.c.a.c #27	ENSGT00940000154557.c.a.d.a.b #28	ENSGT00390000001017 #29	ENSGT00940000162223 #30	ENSGT00390000010711 #31	ENSGT00390000001958 #32	ENSGT00390000015005 #33	ENSGT00930000151073 #34	ENSGT01030000234555.a.a.b.a.b.a #35	ENSGT00940000160251 #36	ENSGT00530000063849.B #37	ENSGT00940000158400	ENSGT00940000155343
Steppe mouse	MODERN SPECIES	2124															Dram2 (ENSMSIG00000011039) #21	Cept1 (ENSMSIG00000010984) #22	ENSMSIG00000010968	Dennd2d (ENSMSIG00000010912) #23	ENSMSIG00000010909	ENSMSIG00000010904	ENSMSIG00000010882 #24
spretus	MODERN SPECIES	12	Slc6a17 (MGP_SPRETEiJ_G0026453) #8	Kcnc4 (MGP_SPRETEiJ_G0026452) #9	Rbm15 (MGP_SPRETEiJ_G0026451) #10	Slc16a4 (MGP_SPRETEiJ_G0026450) #11	Lamtor5 (MGP_SPRETEiJ_G0026449) #12	Prok1 (MGP_SPRETEiJ_G0026448) #13	MGP_SPRETEiJ_G0026447	Cym (MGP_SPRETEiJ_G0026446) #14	Kcna10 (MGP_SPRETEiJ_G0026445) #15	Kcna2 (MGP_SPRETEiJ_G0026444) #16	Kcna3 (MGP_SPRETEiJ_G0026443) #17	Or11i1 (MGP_SPRETEiJ_G0026442) #18	Cd53 (MGP_SPRETEiJ_G0026441) #19	Lrif1 (MGP_SPRETEiJ_G0026440) #20	Dram2 (MGP_SPRETEiJ_G0026439) #21	Cept1 (MGP_SPRETEiJ_G0026438) #22	Dennd2d (MGP_SPRETEiJ_G0026437) #23	Chil6 (MGP_SPRETEiJ_G0026436) #24	Chia1 (MGP_SPRETEiJ_G0026434) #27	Chil5 (MGP_SPRETEiJ_G0026433) #28	Pifo (MGP_SPRETEiJ_G0026432) #29	Ovgp1 (MGP_SPRETEiJ_G0026431) #30	Wdr77 (MGP_SPRETEiJ_G0026430) #31	Atp5pb (MGP_SPRETEiJ_G0026429) #32	I830077J02Rik (MGP_SPRETEiJ_G0026428) #33	Tmigd3 (MGP_SPRETEiJ_G0026427) #34	MGP_SPRETEiJ_G0026426 #35	Rap1a (MGP_SPRETEiJ_G0026425) #36	Inka2 (MGP_SPRETEiJ_G0026424) #37	Ddx20 (MGP_SPRETEiJ_G0026423)	Kcnd3 (MGP_SPRETEiJ_G0026422)
Ryukyu mouse	MODERN SPECIES	12	Slc6a17 (MGP_CAROLIEiJ_G0025503) #8	Kcnc4 (MGP_CAROLIEiJ_G0025502) #9	Rbm15 (MGP_CAROLIEiJ_G0025501) #10	Slc16a4 (MGP_CAROLIEiJ_G0025500) #11	MGP_CAROLIEiJ_G0025499 #12	Prok1 (MGP_CAROLIEiJ_G0025498) #13	MGP_CAROLIEiJ_G0025497	Cym (MGP_CAROLIEiJ_G0025496) #14	Kcna10 (MGP_CAROLIEiJ_G0025495) #15	Kcna2 (MGP_CAROLIEiJ_G0025494) #16	Kcna3 (MGP_CAROLIEiJ_G0025493) #17	Or11i1 (MGP_CAROLIEiJ_G0025492) #18	Cd53 (MGP_CAROLIEiJ_G0025491) #19	Lrif1 (MGP_CAROLIEiJ_G0025490) #20	Dram2 (MGP_CAROLIEiJ_G0025489) #21	Cept1 (MGP_CAROLIEiJ_G0025488) #22	Dennd2d (MGP_CAROLIEiJ_G0025487) #23	Chil6 (MGP_CAROLIEiJ_G0025486) #24	Chia1 (MGP_CAROLIEiJ_G0025485) #27	Chil5 (MGP_CAROLIEiJ_G0025484) #28	Pifo (MGP_CAROLIEiJ_G0025483) #29	Ovgp1 (MGP_CAROLIEiJ_G0025482) #30	Wdr77 (MGP_CAROLIEiJ_G0025481) #31	Atp5pb (MGP_CAROLIEiJ_G0025480) #32	I830077J02Rik (MGP_CAROLIEiJ_G0025479) #33	Tmigd3 (MGP_CAROLIEiJ_G0025478) #34	Adora3 (MGP_CAROLIEiJ_G0025477) #35	Rap1a (MGP_CAROLIEiJ_G0025476) #36	Inka2 (MGP_CAROLIEiJ_G0025475) #37	Ddx20 (MGP_CAROLIEiJ_G0025474)	Kcnd3 (MGP_CAROLIEiJ_G0025473)
Shrew mouse	MODERN SPECIES	17	Slc6a17 (MGP_PahariEiJ_G0026949) #8	Kcnc4 (MGP_PahariEiJ_G0026948) #9	Rbm15 (MGP_PahariEiJ_G0026947) #10	Slc16a4 (MGP_PahariEiJ_G0026946) #11	Lamtor5 (MGP_PahariEiJ_G0026945) #12	Prok1 (MGP_PahariEiJ_G0026944) #13	MGP_PahariEiJ_G0026943	Cym (MGP_PahariEiJ_G0026942) #14	Kcna10 (MGP_PahariEiJ_G0026941) #15	Kcna2 (MGP_PahariEiJ_G0026940) #16	Kcna3 (MGP_PahariEiJ_G0026939) #17	Or11i1 (MGP_PahariEiJ_G0026938) #18	Cd53 (MGP_PahariEiJ_G0026937) #19	Lrif1 (MGP_PahariEiJ_G0026936) #20	Dram2 (MGP_PahariEiJ_G0026935) #21	Cept1 (MGP_PahariEiJ_G0026934) #22	Dennd2d (MGP_PahariEiJ_G0026933) #23	Chil6 (MGP_PahariEiJ_G0026932) #24	Chia1 (MGP_PahariEiJ_G0026930) #27	Chil5 (MGP_PahariEiJ_G0026929) #28	Pifo (MGP_PahariEiJ_G0026928) #29	Ovgp1 (MGP_PahariEiJ_G0026927) #30	Wdr77 (MGP_PahariEiJ_G0026926) #31	Atp5pb (MGP_PahariEiJ_G0026925) #32	I830077J02Rik (MGP_PahariEiJ_G0026924) #33	Tmigd3 (MGP_PahariEiJ_G0026923) #34	Adora3 (MGP_PahariEiJ_G0026922) #35	Rap1a (MGP_PahariEiJ_G0026921) #36	Inka2 (MGP_PahariEiJ_G0026920) #37	Ddx20 (MGP_PahariEiJ_G0026919)	Kcnd3 (MGP_PahariEiJ_G0026918)
Rat	MODERN SPECIES	11	Kcnc4 (ENSRNOG00000060988) #9	Ndufa3-ps3 (ENSRNOG00000050514)	Rbm15 (ENSRNOG00000047499) #10	Slc16a4 (ENSRNOG00000018131) #11	Lamtor5 (ENSRNOG00000018186) #12	Prok1 (ENSRNOG00000018201) #13	Cym (ENSRNOG00000018236) #14	Kcna10 (ENSRNOG00000050416) #15	Kcna2 (ENSRNOG00000018285) #16	AC113635.2 (ENSRNOG00000056335)	Kcna3 (ENSRNOG00000062002) #17	Or11i1 (ENSRNOG00000018112) #18	Cd53 (ENSRNOG00000017874) #19	Lrif1 (ENSRNOG00000017784) #20	Dram2 (ENSRNOG00000017744) #21	Cept1 (ENSRNOG00000017723) #22	Dennd2d (ENSRNOG00000017680) #23	ENSRNOG00000065668	RGD1309110 (ENSRNOG00000017574) #24	Chi3l3 (ENSRNOG00000037115) #25	ENSRNOG00000067768 #25	Chia (ENSRNOG00000033162) #27	Prdx1l1 (ENSRNOG00000017695)	AABR07012788.1 (ENSRNOG00000051068) #28	Pifo (ENSRNOG00000016842) #29	Wdr77 (ENSRNOG00000016394) #31	Atp5pb (ENSRNOG00000064742) #32	C2h1orf162 (ENSRNOG00000070434) #33	Adora3 (ENSRNOG00000015788) #35	Tmigd3 (ENSRNOG00000043375) #34	Rap1a (ENSRNOG00000032463) #36