Euarchontoglires_A ANCESTRAL SPECIES 7 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000166736 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000164150 ENSGT00940000154417.a.a #17 ENSGT01080000257453 ENSGT00940000154417.a.b #16 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000166352 ENSGT00940000162377 #30 ENSGT00940000163278 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 Glires ANCESTRAL SPECIES 6 ENSGT00390000011262 #12 ENSGT00940000166736 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000164150 ENSGT00940000154417.a.a #17 ENSGT01100000264521 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000166352 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 Rodentia ANCESTRAL SPECIES 8 ENSGT00390000011262 #12 ENSGT00940000166736 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000164150 ENSGT00940000154417.a.a #17 ENSGT01100000264521 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000166352 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 Rodentia_B ANCESTRAL SPECIES 21 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Myomorpha ANCESTRAL SPECIES 22 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Muroidea ANCESTRAL SPECIES 19 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Muroidea_A ANCESTRAL SPECIES 16 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Murinae ANCESTRAL SPECIES 15 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Mus ANCESTRAL SPECIES 6 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Mus_A ANCESTRAL SPECIES 8 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Ryukyu mouse MODERN SPECIES 17 Znrf1 (MGP_CAROLIEiJ_G0031577) #7 Wdr59 (MGP_CAROLIEiJ_G0031576) #8 Fa2h (MGP_CAROLIEiJ_G0031575) #9 MGP_CAROLIEiJ_G0031574 #10 Rfwd3 (MGP_CAROLIEiJ_G0031573) #11 Glg1 (MGP_CAROLIEiJ_G0031572) #12 Pdpr (MGP_CAROLIEiJ_G0031571) #13 Clec18a (MGP_CAROLIEiJ_G0031570) #14 MGP_CAROLIEiJ_G0031569 #15 Ddx19b (MGP_CAROLIEiJ_G0031568) #16 Ddx19a (MGP_CAROLIEiJ_G0031567) #17 St3gal2 (MGP_CAROLIEiJ_G0031566) #18 Fcsk (MGP_CAROLIEiJ_G0031565) #19 Cog4 (MGP_CAROLIEiJ_G0031564) #20 Sf3b3 (MGP_CAROLIEiJ_G0031563) #21 Il34 (MGP_CAROLIEiJ_G0031562) #22 Mtss2 (MGP_CAROLIEiJ_G0031561) #23 Vac14 (MGP_CAROLIEiJ_G0031560) #24 Hydin (MGP_CAROLIEiJ_G0031559) #25 Cmtr2 (MGP_CAROLIEiJ_G0031558) #26 Calb2 (MGP_CAROLIEiJ_G0031557) #27 MGP_CAROLIEiJ_G0031556 #28 MGP_CAROLIEiJ_G0031555 #29 Zfp612 (MGP_CAROLIEiJ_G0031554) #30 Chst4 (MGP_CAROLIEiJ_G0031553) #31 Tat (MGP_CAROLIEiJ_G0031552) #32 Marveld3 (MGP_CAROLIEiJ_G0031551) #33 Phlpp2 (MGP_CAROLIEiJ_G0031550) #34 Ap1g1 (MGP_CAROLIEiJ_G0031549) #35 Atxn1l (MGP_CAROLIEiJ_G0031548) #36 Zfp821 (MGP_CAROLIEiJ_G0031547) #37 Mus_B ANCESTRAL SPECIES 6 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Mouse MODERN SPECIES 17 Wdr59 (ENSMUSG00000031959) #8 Fa2h (ENSMUSG00000033579) #9 Mlkl (ENSMUSG00000012519) Rfwd3 (ENSMUSG00000033596) #11 Glg1 (ENSMUSG00000003316) #12 Pdpr (ENSMUSG00000033624) #13 Clec18a (ENSMUSG00000033633) #14 Exosc6 (ENSMUSG00000109941) Aars (ENSMUSG00000031960) Ddx19b (ENSMUSG00000033658) #16 Ddx19a (ENSMUSG00000015023) #17 St3gal2 (ENSMUSG00000031749) #18 Fcsk (ENSMUSG00000033703) #19 Cog4 (ENSMUSG00000031753) #20 Sf3b3 (ENSMUSG00000033732) #21 Il34 (ENSMUSG00000031750) #22 Mtss2 (ENSMUSG00000033763) #23 Vac14 (ENSMUSG00000010936) #24 Hydin (ENSMUSG00000059854) #25 Cmtr2 (ENSMUSG00000046441) #26 Calb2 (ENSMUSG00000003657) #27 Tle7 (ENSMUSG00000095941) #28 Zfp612 (ENSMUSG00000044676) #30 Chst4 (ENSMUSG00000035930) #31 Tat (ENSMUSG00000001670) #32 Marveld3 (ENSMUSG00000001672) #33 Phlpp2 (ENSMUSG00000031732) #34 Ap1g1 (ENSMUSG00000031731) #35 Atxn1l (ENSMUSG00000069895) #36 Zfp821 (ENSMUSG00000031728) #37 Ist1 (ENSMUSG00000031729) Mus_C ANCESTRAL SPECIES 5 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Steppe mouse MODERN SPECIES 3379 ENSMSIG00000019575 Rfwd3 (ENSMSIG00000019554) #11 Glg1 (ENSMSIG00000019520) #12 Pdpr (ENSMSIG00000019469) #13 Clec18a (ENSMSIG00000019426) #14 Exosc6 (ENSMSIG00000019415) Aars (ENSMSIG00000019384) ENSMSIG00000019377 Ddx19b (ENSMSIG00000019285) #16 ENSMSIG00000019272 Ddx19a (ENSMSIG00000019234) #17 St3gal2 (ENSMSIG00000019213) #18 Fcsk (ENSMSIG00000019146) #19 Cog4 (ENSMSIG00000019065) #20 Sf3b3 (ENSMSIG00000018994) #21 Il34 (ENSMSIG00000018943) #22 Mtss2 (ENSMSIG00000018835) #23 Vac14 (ENSMSIG00000018802) #24 Hydin (ENSMSIG00000018510) #25 Cmtr2 (ENSMSIG00000018491) #26 ENSMSIG00000018482 #27 Tle7 (ENSMSIG00000018373) #28 ENSMSIG00000018357 Zfp612 (ENSMSIG00000018325) #30 Chst4 (ENSMSIG00000018311) #31 ENSMSIG00000018296 Tat (ENSMSIG00000018276) #32 Marveld3 (ENSMSIG00000018257) #33 Phlpp2 (ENSMSIG00000018231) #34 ENSMSIG00000018225 ENSMSIG00000018209 spretus MODERN SPECIES 17 Znrf1 (MGP_SPRETEiJ_G0032695) #7 Wdr59 (MGP_SPRETEiJ_G0032694) #8 Fa2h (MGP_SPRETEiJ_G0032693) #9 Mlkl (MGP_SPRETEiJ_G0032692) Rfwd3 (MGP_SPRETEiJ_G0032691) #11 Glg1 (MGP_SPRETEiJ_G0032690) #12 Pdpr (MGP_SPRETEiJ_G0032689) #13 MGP_SPRETEiJ_G0032688 #14 MGP_SPRETEiJ_G0032687 MGP_SPRETEiJ_G0032686 #16 MGP_SPRETEiJ_G0032685 #17 St3gal2 (MGP_SPRETEiJ_G0032684) #18 Fcsk (MGP_SPRETEiJ_G0032683) #19 Cog4 (MGP_SPRETEiJ_G0032682) #20 Sf3b3 (MGP_SPRETEiJ_G0032681) #21 MGP_SPRETEiJ_G0032680 #22 Mtss2 (MGP_SPRETEiJ_G0032679) #23 Vac14 (MGP_SPRETEiJ_G0032678) #24 MGP_SPRETEiJ_G0032677 #25 Cmtr2 (MGP_SPRETEiJ_G0032676) #26 Calb2 (MGP_SPRETEiJ_G0032675) #27 MGP_SPRETEiJ_G0032674 #28 MGP_SPRETEiJ_G0032673 Zfp612 (MGP_SPRETEiJ_G0032672) #30 Chst4 (MGP_SPRETEiJ_G0032671) #31 Tat (MGP_SPRETEiJ_G0032670) #32 Marveld3 (MGP_SPRETEiJ_G0032669) #33 Phlpp2 (MGP_SPRETEiJ_G0032668) #34 Ap1g1 (MGP_SPRETEiJ_G0032667) #35 Atxn1l (MGP_SPRETEiJ_G0032666) #36 Zfp821 (MGP_SPRETEiJ_G0032665) #37 Shrew mouse MODERN SPECIES 12 Znrf1 (MGP_PahariEiJ_G0023176) #7 Wdr59 (MGP_PahariEiJ_G0023175) #8 Fa2h (MGP_PahariEiJ_G0023174) #9 Mlkl (MGP_PahariEiJ_G0023173) Rfwd3 (MGP_PahariEiJ_G0023172) #11 Glg1 (MGP_PahariEiJ_G0023171) #12 Pdpr (MGP_PahariEiJ_G0023170) #13 MGP_PahariEiJ_G0023169 #14 MGP_PahariEiJ_G0023168 MGP_PahariEiJ_G0023167 MGP_PahariEiJ_G0023166 #17 St3gal2 (MGP_PahariEiJ_G0023165) #18 Fcsk (MGP_PahariEiJ_G0023164) #19 Cog4 (MGP_PahariEiJ_G0023163) #20 Sf3b3 (MGP_PahariEiJ_G0023162) #21 Il34 (MGP_PahariEiJ_G0023161) #22 Mtss2 (MGP_PahariEiJ_G0023160) #23 Vac14 (MGP_PahariEiJ_G0023159) #24 Hydin (MGP_PahariEiJ_G0023158) #25 Cmtr2 (MGP_PahariEiJ_G0023157) #26 Calb2 (MGP_PahariEiJ_G0023156) #27 MGP_PahariEiJ_G0023155 #28 MGP_PahariEiJ_G0023154 Zfp612 (MGP_PahariEiJ_G0023153) #30 MGP_PahariEiJ_G0023152 #31 Tat (MGP_PahariEiJ_G0023151) #32 Marveld3 (MGP_PahariEiJ_G0023150) #33 Phlpp2 (MGP_PahariEiJ_G0023149) #34 Ap1g1 (MGP_PahariEiJ_G0023148) #35 Zfp821 (MGP_PahariEiJ_G0023147) #37 Ist1 (MGP_PahariEiJ_G0023146) Rat MODERN SPECIES 10 Mlkl (ENSRNOG00000042353) Rfwd3 (ENSRNOG00000051461) #11 Glg1 (ENSRNOG00000018668) #12 ENSRNOG00000066493 Pdpr (ENSRNOG00000022593) #13 Clec18a (ENSRNOG00000022721) #14 Exosc6 (ENSRNOG00000018582) Aars1 (ENSRNOG00000018404) Ddx19b (ENSRNOG00000064019) #16 Ddx19a (ENSRNOG00000018033) #17 St3gal2 (ENSRNOG00000017932) #18 Fcsk (ENSRNOG00000059453) #19 Cog4 (ENSRNOG00000017745) #20 Sf3b3 (ENSRNOG00000017724) #21 AABR07058423.3 (ENSRNOG00000051265) Il34 (ENSRNOG00000017602) #22 Mtss2 (ENSRNOG00000017500) #23 Vac14 (ENSRNOG00000017219) #24 Hydin (ENSRNOG00000017178) #25 Cmtr2 (ENSRNOG00000017102) #26 Calb2 (ENSRNOG00000016977) #27 Tle7 (ENSRNOG00000038741) #28 Gm17720 (ENSRNOG00000062604) Zfp612 (ENSRNOG00000016971) #30 Chst4 (ENSRNOG00000016953) #31 Tat (ENSRNOG00000016348) #32 Marveld3 (ENSRNOG00000016291) #33 Phlpp2 (ENSRNOG00000016108) #34 Ap1g1 (ENSRNOG00000069458) #35 Atxn1l (ENSRNOG00000038766) #36 Zfp821 (ENSRNOG00000000262) #37 Cricetidae ANCESTRAL SPECIES 7 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT01080000257453 ENSGT00940000154417.a.b #16 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Cricetidae_B ANCESTRAL SPECIES 5 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT01080000257453 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Northern American deer mouse MODERN SPECIES 18 Mlkl (ENSPEMG00000015662) Rfwd3 (ENSPEMG00000017293) #11 Glg1 (ENSPEMG00000007698) #12 Pdpr (ENSPEMG00000009714) #13 Clec18a (ENSPEMG00000013615) #14 ENSPEMG00000015563 Aars (ENSPEMG00000010864) ENSPEMG00000028725 Ddx19b (ENSPEMG00000008683) #16 ENSPEMG00000030117 Ddx19a (ENSPEMG00000004043) #17 St3gal2 (ENSPEMG00000025846) #18 Fcsk (ENSPEMG00000010443) #19 Cog4 (ENSPEMG00000018002) #20 Sf3b3 (ENSPEMG00000008603) #21 Il34 (ENSPEMG00000015570) #22 Mtss2 (ENSPEMG00000017103) #23 Vac14 (ENSPEMG00000007163) #24 Hydin (ENSPEMG00000017860) #25 ENSPEMG00000026038 Cmtr2 (ENSPEMG00000015578) #26 Calb2 (ENSPEMG00000017745) #27 Tle7 (ENSPEMG00000009194) #28 ENSPEMG00000009468 Zfp612 (ENSPEMG00000013228) #30 ENSPEMG00000027545 Chst4 (ENSPEMG00000001048) #31 Tat (ENSPEMG00000002277) #32 Marveld3 (ENSPEMG00000028662) #33 Phlpp2 (ENSPEMG00000010279) #34 Ap1g1 (ENSPEMG00000011828) #35 Prairie vole MODERN SPECIES 12 Fa2h (ENSMOCG00000000805) #9 ENSMOCG00000007184 Mlkl (ENSMOCG00000011266) Rfwd3 (ENSMOCG00000022178) #11 Glg1 (ENSMOCG00000016266) #12 Pdpr (ENSMOCG00000022134) #13 Clec18a (ENSMOCG00000018614) #14 Exosc6 (ENSMOCG00000003020) Aars (ENSMOCG00000005336) Ddx19b (ENSMOCG00000007627) #16 Ddx19a (ENSMOCG00000017220) #17 St3gal2 (ENSMOCG00000018546) #18 Fcsk (ENSMOCG00000003610) #19 Cog4 (ENSMOCG00000020120) #20 Sf3b3 (ENSMOCG00000006108) #21 Il34 (ENSMOCG00000007333) #22 Mtss2 (ENSMOCG00000016655) #23 Vac14 (ENSMOCG00000022173) #24 Hydin (ENSMOCG00000012796) #25 Cmtr2 (ENSMOCG00000000828) #26 Calb2 (ENSMOCG00000015513) #27 Tle7 (ENSMOCG00000021470) #28 ENSMOCG00000000735 Zfp612 (ENSMOCG00000000684) #30 Tat (ENSMOCG00000009410) #32 Marveld3 (ENSMOCG00000013975) #33 Phlpp2 (ENSMOCG00000018836) #34 Ap1g1 (ENSMOCG00000011726) #35 Atxn1l (ENSMOCG00000021726) #36 Zfp821 (ENSMOCG00000021660) #37 Ist1 (ENSMOCG00000001146) Cricetinae ANCESTRAL SPECIES 16 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT00940000164150 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Chinese hamster chok1gshd MODERN SPECIES 112 Wdr59 (ENSCGRG00001016673) #8 Fa2h (ENSCGRG00001000708) #9 Mlkl (ENSCGRG00001014734) Rfwd3 (ENSCGRG00001023818) #11 Glg1 (ENSCGRG00001018933) #12 Pdpr (ENSCGRG00001021291) #13 Clec18a (ENSCGRG00001018618) #14 Exosc6 (ENSCGRG00001000899) AARS (ENSCGRG00001014390) Ddx19b (ENSCGRG00001015299) #16 St3gal2 (ENSCGRG00001019838) #18 Fcsk (ENSCGRG00001025027) #19 Cog4 (ENSCGRG00001007403) #20 Sf3b3 (ENSCGRG00001015908) #21 ENSCGRG00001000994 Il34 (ENSCGRG00001005627) #22 Mtss2 (ENSCGRG00001008250) #23 Vac14 (ENSCGRG00001003764) #24 Hydin (ENSCGRG00001020638) #25 Cmtr2 (ENSCGRG00001008188) #26 Calb2 (ENSCGRG00001021465) #27 Tle7 (ENSCGRG00001018163) #28 Zfp612 (ENSCGRG00001000845) #30 Chst4 (ENSCGRG00001013422) #31 Tat (ENSCGRG00001010175) #32 Marveld3 (ENSCGRG00001018229) #33 Phlpp2 (ENSCGRG00001014088) #34 Ap1g1 (ENSCGRG00001022757) #35 Atxn1l (ENSCGRG00001005951) #36 Zfp821 (ENSCGRG00001023974) #37 Ist1 (ENSCGRG00001012174) Golden Hamster MODERN SPECIES 654 Znrf1 (ENSMAUG00000008268) #7 Wdr59 (ENSMAUG00000013115) #8 Fa2h (ENSMAUG00000008344) #9 Mlkl (ENSMAUG00000018124) Rfwd3 (ENSMAUG00000019858) #11 Glg1 (ENSMAUG00000018954) #12 Clec18a (ENSMAUG00000019711) #14 Exosc6 (ENSMAUG00000008040) Aars1 (ENSMAUG00000021342) ENSMAUG00000008484 ENSMAUG00000020831 #17 St3gal2 (ENSMAUG00000014142) #18 Fcsk (ENSMAUG00000021677) #19 Cog4 (ENSMAUG00000021674) #20 Sf3b3 (ENSMAUG00000013618) #21 Il34 (ENSMAUG00000017461) #22 Mtss2 (ENSMAUG00000014807) #23 Vac14 (ENSMAUG00000015801) #24 Hydin (ENSMAUG00000013961) #25 Cmtr2 (ENSMAUG00000008760) #26 Tat (ENSMAUG00000010472) #32 Marveld3 (ENSMAUG00000001115) #33 Phlpp2 (ENSMAUG00000018256) #34 Ap1g1 (ENSMAUG00000008015) #35 Atxn1l (ENSMAUG00000016349) #36 Zfp821 (ENSMAUG00000021582) #37 Ist1 (ENSMAUG00000003352) Pkd1l3 (ENSMAUG00000001313) Dhodh (ENSMAUG00000005725) Hp (ENSMAUG00000019294) Txnl4b (ENSMAUG00000004992) Upper Galilee mountains blind mole rat MODERN SPECIES 902 Fcsk (ENSNGAG00000020055) #19 Cog4 (ENSNGAG00000022904) #20 Sf3b3 (ENSNGAG00000021903) #21 Il34 (ENSNGAG00000015616) #22 Mtss2 (ENSNGAG00000001336) #23 Vac14 (ENSNGAG00000019949) #24 Hydin (ENSNGAG00000001005) #25 Cmtr2 (ENSNGAG00000015133) #26 Calb2 (ENSNGAG00000016791) #27 Tle7 (ENSNGAG00000011923) #28 Zfp612 (ENSNGAG00000004069) #30 Tat (ENSNGAG00000006911) #32 Marveld3 (ENSNGAG00000021023) #33 Phlpp2 (ENSNGAG00000020098) #34 Ap1g1 (ENSNGAG00000001124) #35 ENSNGAG00000019717 Atxn1l (ENSNGAG00000011960) #36 Zfp821 (ENSNGAG00000012519) #37 ENSNGAG00000011305 Lesser Egyptian jerboa MODERN SPECIES 71 ENSJJAG00000020947 ENSJJAG00000024115 Taf1c (ENSJJAG00000010873) Adad2 (ENSJJAG00000019640) Kcng4 (ENSJJAG00000017103) ENSJJAG00000014371 #12 Pdpr (ENSJJAG00000018042) #13 Clec18a (ENSJJAG00000012129) #14 Exosc6 (ENSJJAG00000003460) Aars (ENSJJAG00000008731) ENSJJAG00000014394 St3gal2 (ENSJJAG00000006508) #18 Fcsk (ENSJJAG00000022615) #19 Cog4 (ENSJJAG00000013653) #20 Sf3b3 (ENSJJAG00000003948) #21 Il34 (ENSJJAG00000013016) #22 Mtss2 (ENSJJAG00000015697) #23 Vac14 (ENSJJAG00000000270) #24 ENSJJAG00000018488 Hydin (ENSJJAG00000024000) #25 ENSJJAG00000010966 ENSJJAG00000013980 Calb2 (ENSJJAG00000019534) #27 Tle7 (ENSJJAG00000020440) #28 Zfp612 (ENSJJAG00000014956) #30 Chst4 (ENSJJAG00000016154) #31 Tat (ENSJJAG00000015605) #32 ENSJJAG00000016248 Marveld3 (ENSJJAG00000015672) #33 Phlpp2 (ENSJJAG00000018183) #34 Ap1g1 (ENSJJAG00000022831) #35 Kangaroo rat MODERN SPECIES 337 Ldhd (ENSDORG00000011933) Znrf1 (ENSDORG00000011928) #7 Wdr59 (ENSDORG00000004163) #8 Fa2h (ENSDORG00000023167) #9 Rfwd3 (ENSDORG00000007727) #11 Glg1 (ENSDORG00000007724) #12 Pdpr (ENSDORG00000004105) #13 Clec18a (ENSDORG00000004108) #14 Aars (ENSDORG00000004110) Ddx19b (ENSDORG00000004421) #16 Ddx19a (ENSDORG00000002078) #17 St3gal2 (ENSDORG00000025194) #18 Fcsk (ENSDORG00000014055) #19 Cog4 (ENSDORG00000014062) #20 Sf3b3 (ENSDORG00000014176) #21 Il34 (ENSDORG00000009844) #22 Mtss2 (ENSDORG00000011119) #23 Vac14 (ENSDORG00000011122) #24 ENSDORG00000023244 #25 Cmtr2 (ENSDORG00000025105) #26 Calb2 (ENSDORG00000016045) #27 Tle7 (ENSDORG00000023639) #28 Zfp612 (ENSDORG00000011582) #30 Chst4 (ENSDORG00000002830) #31 Tat (ENSDORG00000002831) #32 Marveld3 (ENSDORG00000005833) #33 Phlpp2 (ENSDORG00000005834) #34 ENSDORG00000030095 #35 Atxn1l (ENSDORG00000028057) #36 Zfp821 (ENSDORG00000002406) #37 Ist1 (ENSDORG00000002409) Rodentia_A ANCESTRAL SPECIES 6 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000166736 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT01080000257453 ENSGT00940000154417.a.b #16 ENSGT00940000154417.a.a #17 ENSGT01100000264521 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000166352 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 Hystricomorpha ANCESTRAL SPECIES 22 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT01080000257453 ENSGT00940000154417.a.b #16 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000166352 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 Hystricomorpha_a ANCESTRAL SPECIES 22 ENSGT00940000157600 #8 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Guinea pig MODERN SPECIES 22 ZNRF1 (ENSCPOG00000010190) #7 WDR59 (ENSCPOG00000010169) #8 FA2H (ENSCPOG00000015264) #9 MLKL (ENSCPOG00000008080) RFWD3 (ENSCPOG00000000856) #11 GLG1 (ENSCPOG00000014381) #12 PDPR (ENSCPOG00000020169) #13 ENSCPOG00000002368 #14 ENSCPOG00000002371 AARS1 (ENSCPOG00000002373) DDX19B (ENSCPOG00000006743) #16 ST3GAL2 (ENSCPOG00000035552) #18 FCSK (ENSCPOG00000015035) #19 COG4 (ENSCPOG00000015042) #20 SF3B3 (ENSCPOG00000000586) #21 IL34 (ENSCPOG00000039462) #22 MTSS2 (ENSCPOG00000021684) #23 VAC14 (ENSCPOG00000001773) #24 ENSCPOG00000031446 #25 CMTR2 (ENSCPOG00000015680) #26 CALB2 (ENSCPOG00000010380) #27 ENSCPOG00000021516 #28 ZNF23 (ENSCPOG00000040137) #30 CHST4 (ENSCPOG00000021963) #31 TAT (ENSCPOG00000008010) #32 ENSCPOG00000012155 #33 PHLPP2 (ENSCPOG00000012158) #34 AP1G1 (ENSCPOG00000010912) #35 ATXN1L (ENSCPOG00000033756) #36 ZNF821 (ENSCPOG00000005644) #37 IST1 (ENSCPOG00000012836) Hystricomorpha_b ANCESTRAL SPECIES 15 ENSGT00940000157600 #8 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Long-tailed chinchilla MODERN SPECIES 191 FA2H (ENSCLAG00000004239) #9 ENSCLAG00000004307 ENSCLAG00000004718 RFWD3 (ENSCLAG00000003735) #11 GLG1 (ENSCLAG00000004578) #12 PDPR (ENSCLAG00000003939) #13 ENSCLAG00000003813 #14 EXOSC6 (ENSCLAG00000004121) AARS1 (ENSCLAG00000004366) DDX19B (ENSCLAG00000005224) #16 DDX19A (ENSCLAG00000004996) #17 ST3GAL2 (ENSCLAG00000005263) #18 FCSK (ENSCLAG00000005770) #19 COG4 (ENSCLAG00000006686) #20 SF3B3 (ENSCLAG00000003921) #21 IL34 (ENSCLAG00000003136) #22 MTSS2 (ENSCLAG00000003423) #23 VAC14 (ENSCLAG00000003905) #24 HYDIN (ENSCLAG00000012219) #25 CMTR2 (ENSCLAG00000008920) #26 CALB2 (ENSCLAG00000004773) #27 TLE7 (ENSCLAG00000005771) #28 ENSCLAG00000005991 ZNF23 (ENSCLAG00000006028) #30 CHST4 (ENSCLAG00000017669) #31 TAT (ENSCLAG00000003256) #32 ENSCLAG00000003348 #33 PHLPP2 (ENSCLAG00000003562) #34 AP1G1 (ENSCLAG00000003945) #35 ATXN1L (ENSCLAG00000005129) #36 ZNF821 (ENSCLAG00000005384) #37 Degu MODERN SPECIES 52 ENSODEG00000013539 RFWD3 (ENSODEG00000013462) #11 GLG1 (ENSODEG00000014011) #12 PDPR (ENSODEG00000014206) #13 ENSODEG00000020359 ENSODEG00000014787 #14 EXOSC6 (ENSODEG00000020448) ENSODEG00000014435 DDX19B (ENSODEG00000014050) #16 DDX19A (ENSODEG00000014238) #17 ST3GAL2 (ENSODEG00000013892) #18 ENSODEG00000020190 FCSK (ENSODEG00000014046) #19 ENSODEG00000014686 #20 SF3B3 (ENSODEG00000014154) #21 IL34 (ENSODEG00000014364) #22 MTSS2 (ENSODEG00000013647) #23 VAC14 (ENSODEG00000014293) #24 ENSODEG00000014323 #25 ENSODEG00000014592 #27 ENSODEG00000014032 #28 ENSODEG00000014851 #30 TAT (ENSODEG00000014121) #32 ENSODEG00000014262 #33 PHLPP2 (ENSODEG00000014074) #34 AP1G1 (ENSODEG00000014660) #35 ATXN1L (ENSODEG00000015180) #36 ZNF821 (ENSODEG00000014215) #37 ENSODEG00000014270 DHODH (ENSODEG00000015071) ENSODEG00000014494 Naked mole-rat female MODERN SPECIES 26 RFWD3 (ENSHGLG00000012627) #11 GLG1 (ENSHGLG00000013832) #12 ENSHGLG00000048099 ENSHGLG00000012857 #13 ENSHGLG00000014294 #14 EXOSC6 (ENSHGLG00000021313) AARS1 (ENSHGLG00000011756) ENSHGLG00000032318 DDX19B (ENSHGLG00000009955) #16 ENSHGLG00000036535 DDX19A (ENSHGLG00000011681) #17 ST3GAL2 (ENSHGLG00000044574) #18 FCSK (ENSHGLG00000012100) #19 COG4 (ENSHGLG00000019190) #20 SF3B3 (ENSHGLG00000010135) #21 IL34 (ENSHGLG00000012281) #22 MTSS1L (ENSHGLG00000046719) #23 VAC14 (ENSHGLG00000009916) #24 HYDIN (ENSHGLG00000032026) #25 ENSHGLG00000014406 ENSHGLG00000042715 CMTR2 (ENSHGLG00000013565) #26 CALB2 (ENSHGLG00000017124) #27 ENSHGLG00000038201 TLE7 (ENSHGLG00000011868) #28 ENSHGLG00000046687 ENSHGLG00000011510 #30 ENSHGLG00000043779 CHST4 (ENSHGLG00000020785) #31 TAT (ENSHGLG00000012596) #32 ENSHGLG00000013360 #33 Sciuridae ANCESTRAL SPECIES 5 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000166736 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT01100000264521 ENSGT00940000154417.a.b #16 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Marmotini ANCESTRAL SPECIES 17 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000166736 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT00940000154417.a.a #17 ENSGT01100000264521 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00530000063506.B.p ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 Marmotini_b ANCESTRAL SPECIES 7 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000153348.A ENSGT00940000157335 ENSGT01100000264521 ENSGT00940000154417.a.b #16 ENSGT00940000154417.a.a #17 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000162377 #30 ENSGT00940000162746 #31 ENSGT00530000063506.B.p ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 Squirrel MODERN SPECIES 75 WDR59 (ENSSTOG00000010240) #8 FA2H (ENSSTOG00000010231) #9 MLKL (ENSSTOG00000010220) RFWD3 (ENSSTOG00000010196) #11 GLG1 (ENSSTOG00000010174) #12 PDPR (ENSSTOG00000009422) #13 ENSSTOG00000010164 #14 EXOSC6 (ENSSTOG00000006849) AARS1 (ENSSTOG00000006856) DDX19B (ENSSTOG00000025733) #16 DDX19A (ENSSTOG00000006938) #17 ST3GAL2 (ENSSTOG00000006961) #18 FCSK (ENSSTOG00000006970) #19 COG4 (ENSSTOG00000007026) #20 SF3B3 (ENSSTOG00000007065) #21 IL34 (ENSSTOG00000015365) #22 MTSS2 (ENSSTOG00000022597) #23 VAC14 (ENSSTOG00000010625) #24 ENSSTOG00000032230 #25 CMTR2 (ENSSTOG00000029180) #26 CALB2 (ENSSTOG00000008228) #27 TLE7 (ENSSTOG00000026085) #28 ZNF23 (ENSSTOG00000033277) #30 CHST4 (ENSSTOG00000003061) #31 ENSSTOG00000022167 TAT (ENSSTOG00000003062) #32 MARVELD3 (ENSSTOG00000023784) #33 PHLPP2 (ENSSTOG00000022464) #34 AP1G1 (ENSSTOG00000015309) #35 ENSSTOG00000024576 ATXN1L (ENSSTOG00000024179) #36 Arctic ground squirrel MODERN SPECIES 209 MLKL (ENSUPAG00010015276) RFWD3 (ENSUPAG00010015257) #11 GLG1 (ENSUPAG00010015212) #12 PDPR (ENSUPAG00010015193) #13 ENSUPAG00010015179 #14 EXOSC6 (ENSUPAG00010015174) AARS1 (ENSUPAG00010015159) ENSUPAG00010015150 DDX19B (ENSUPAG00010015108) #16 ENSUPAG00010015095 ST3GAL2 (ENSUPAG00010015073) #18 ENSUPAG00010015068 FCSK (ENSUPAG00010015050) #19 COG4 (ENSUPAG00010015009) #20 SF3B3 (ENSUPAG00010014970) #21 IL34 (ENSUPAG00010014920) #22 MTSS2 (ENSUPAG00010014858) #23 VAC14 (ENSUPAG00010014840) #24 ENSUPAG00010014837 ENSUPAG00010014815 #25 CMTR2 (ENSUPAG00010014810) #26 CALB2 (ENSUPAG00010014770) #27 TLE7 (ENSUPAG00010014743) #28 ZNF23 (ENSUPAG00010014732) #30 CHST4 (ENSUPAG00010014722) #31 ENSUPAG00010014699 TAT (ENSUPAG00010014676) #32 ENSUPAG00010014635 #33 PHLPP2 (ENSUPAG00010014596) #34 AP1G1 (ENSUPAG00010014505) #35 ENSUPAG00010014485 Alpin marmot MODERN SPECIES 43 FA2H (ENSMMMG00000012925) #9 MLKL (ENSMMMG00000012932) RFWD3 (ENSMMMG00000012944) #11 GLG1 (ENSMMMG00000013000) #12 ENSMMMG00000013049 PDPR (ENSMMMG00000013052) #13 ENSMMMG00000013087 #14 AARS1 (ENSMMMG00000013100) DDX19B (ENSMMMG00000013116) #16 DDX19A (ENSMMMG00000013166) #17 ENSMMMG00000013185 ST3GAL2 (ENSMMMG00000013190) #18 FCSK (ENSMMMG00000013204) #19 COG4 (ENSMMMG00000013279) #20 SF3B3 (ENSMMMG00000013300) #21 IL34 (ENSMMMG00000013345) #22 VAC14 (ENSMMMG00000013378) #24 ENSMMMG00000013413 #25 CMTR2 (ENSMMMG00000013435) #26 CALB2 (ENSMMMG00000013442) #27 TLE7 (ENSMMMG00000013498) #28 ENSMMMG00000013523 ENSMMMG00000013530 #30 ENSMMMG00000013533 #30 CHST4 (ENSMMMG00000013537) #31 ENSMMMG00000013540 TAT (ENSMMMG00000013543) #32 ENSMMMG00000013559 #33 PHLPP2 (ENSMMMG00000013569) #34 AP1G1 (ENSMMMG00000013614) #35 ENSMMMG00000013690 Eurasian red squirrel MODERN SPECIES 8 FA2H (ENSSVLG00005018910) #9 MLKL (ENSSVLG00005018999) RFWD3 (ENSSVLG00005019092) #11 GLG1 (ENSSVLG00005019575) #12 PDPR (ENSSVLG00005020293) #13 ENSSVLG00005020455 #14 EXOSC6 (ENSSVLG00005020664) AARS1 (ENSSVLG00005020683) ENSSVLG00005020737 #16 DDX19A (ENSSVLG00005020899) #17 ENSSVLG00005020944 ST3GAL2 (ENSSVLG00005020988) #18 FCSK (ENSSVLG00005021026) #19 COG4 (ENSSVLG00005021216) #20 SF3B3 (ENSSVLG00005021597) #21 ENSSVLG00005021652 #22 MTSS2 (ENSSVLG00005021695) #23 VAC14 (ENSSVLG00005021756) #24 HYDIN (ENSSVLG00005021881) #25 ENSSVLG00005022799 ENSSVLG00005022847 CMTR2 (ENSSVLG00005022862) #26 CALB2 (ENSSVLG00005022894) #27 TLE7 (ENSSVLG00005023018) #28 ENSSVLG00005023073 #30 CHST4 (ENSSVLG00005023084) #31 TAT (ENSSVLG00005023106) #32 ENSSVLG00005023175 PHLPP2 (ENSSVLG00005023221) #34 AP1G1 (ENSSVLG00005023353) #35 ATXN1L (ENSSVLG00005023433) #36 Lagomorpha ANCESTRAL SPECIES 19 ENSGT00940000157600 #8 ENSGT00390000002142 #9 ENSGT00390000016453 ENSGT00390000008931 #11 ENSGT00390000011262 #12 ENSGT00940000159082 #13 ENSGT00900000141128 #14 ENSGT00940000157335 ENSGT00940000154417.a.b #16 ENSGT00940000154417.a.a #17 ENSGT01100000264521 ENSGT00940000156356 #18 ENSGT00390000002251 #19 ENSGT00940000154065.a #20 ENSGT00950000183151.a.a.b #21 ENSGT00390000000932 #22 ENSGT00950000183156.a.b.b.a #23 ENSGT00390000008385 #24 ENSGT00610000086095 #25 ENSGT00940000161773 #26 ENSGT00950000183108.b.a.a #27 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b #28 ENSGT00940000163278 ENSGT00940000162746 #31 ENSGT00940000156704 #32 ENSGT00950000183102.A.b.b #33 ENSGT00940000159841 #34 ENSGT00950000182838.B.a.a #35 ENSGT00390000005939.b #36 ENSGT00940000159421 #37 ENSGT00390000007453 Rabbit MODERN SPECIES 16 FA2H (ENSOCUG00000030940) #9 RFWD3 (ENSOCUG00000009152) #11 GLG1 (ENSOCUG00000003425) #12 PDPR (ENSOCUG00000005470) #13 ENSOCUG00000001761 #14 AARS1 (ENSOCUG00000008872) ENSOCUG00000030085 DDX19B (ENSOCUG00000004095) #16 ENSOCUG00000030722 DDX19A (ENSOCUG00000038134) #17 ST3GAL2 (ENSOCUG00000004107) #18 ENSOCUG00000024306 FCSK (ENSOCUG00000004115) #19 COG4 (ENSOCUG00000004130) #20 SF3B3 (ENSOCUG00000004139) #21 IL34 (ENSOCUG00000022125) #22 MTSS2 (ENSOCUG00000015113) #23 VAC14 (ENSOCUG00000021280) #24 HYDIN (ENSOCUG00000011895) #25 ENSOCUG00000022443 CMTR2 (ENSOCUG00000010218) #26 CALB2 (ENSOCUG00000015619) #27 TLE7 (ENSOCUG00000024140) #28 ENSOCUG00000038742 ENSOCUG00000036631 CHST4 (ENSOCUG00000009954) #31 TAT (ENSOCUG00000009957) #32 ENSOCUG00000029885 PHLPP2 (ENSOCUG00000009972) #34 AP1G1 (ENSOCUG00000004412) #35 ENSOCUG00000021407 Pika MODERN SPECIES 2469 FCSK (ENSOPRG00000009764) #19 COG4 (ENSOPRG00000009801) #20 SF3B3 (ENSOPRG00000009847) #21 IL34 (ENSOPRG00000009886) #22 MTSS2 (ENSOPRG00000009900) #23 VAC14 (ENSOPRG00000009980) #24 ENSOPRG00000018760 HYDIN (ENSOPRG00000009999) #25 CMTR2 (ENSOPRG00000015162) #26