Theria ANCESTRAL SPECIES 4 ENSGT00470000042299 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000164965 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Eutheria ANCESTRAL SPECIES 9 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Primates ANCESTRAL SPECIES 5 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Haplorrhini ANCESTRAL SPECIES 2 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Simiiformes ANCESTRAL SPECIES 5 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Catarrhini ANCESTRAL SPECIES 5 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00910000147470 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.b #31 ENSGT00440000034488 #32 ENSGT00950000182878.b.b.`b.a.b.a.a ##31 Hominoidea ANCESTRAL SPECIES 4 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00910000147470 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 Hominidae ANCESTRAL SPECIES 5 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00910000147470 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 Orangutan MODERN SPECIES 19 FOXP4 (ENSPPYG00000016596) #7 MDFI (ENSPPYG00000016598) #8 TFEB (ENSPPYG00000016599) #9 PGC (ENSPPYG00000016601) #10 FRS3 (ENSPPYG00000016602) #11 PRICKLE4 (ENSPPYG00000016603) #12 TOMM6 (ENSPPYG00000033566) #13 USP49 (ENSPPYG00000016604) #14 MED20 (ENSPPYG00000016606) #15 BYSL (ENSPPYG00000017273) #16 CCND3 (ENSPPYG00000016607) #17 ENSPPYG00000016608 #18 ENSPPYG00000039497 #19 ENSPPYG00000033111 #20 GUCA1A (ENSPPYG00000016611) #21 GUCA1ANB (ENSPPYG00000037366) #22 GUCA1B (ENSPPYG00000016612) #23 MRPS10 (ENSPPYG00000016613) #24 TRERF1 (ENSPPYG00000016614) #25 ENSPPYG00000034248 #26 UBR2 (ENSPPYG00000016616) #27 PRPH2 (ENSPPYG00000016617) #28 TBCC (ENSPPYG00000017265) #29 BICRAL (ENSPPYG00000016618) #30 RPL7L1 (ENSPPYG00000016619) #31 C6orf226 (ENSPPYG00000016620) #32 PTCRA (ENSPPYG00000016621) #33 CNPY3 (ENSPPYG00000016622) #34 GNMT (ENSPPYG00000016623) #35 PEX6 (ENSPPYG00000016624) #36 PPP2R5D (ENSPPYG00000016625) #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691.c.a #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00500000045496 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00910000147470 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691.c.a #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00500000045496 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00950000183105.A.m.b Pan ANCESTRAL SPECIES 5 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691.c.a #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00500000045496 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.b.c #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00950000183105.A.m.b Chimpanzee MODERN SPECIES 19 NCR2 (ENSPTRG00000018154) FOXP4 (ENSPTRG00000018155) #7 MDFI (ENSPTRG00000018156) #8 TFEB (ENSPTRG00000018157) #9 PGC (ENSPTRG00000018158) #10 FRS3 (ENSPTRG00000018159) #11 ENSPTRG00000018160 #12 TOMM6 (ENSPTRG00000034313) #13 ENSPTRG00000043479 #14 ENSPTRG00000044058 MED20 (ENSPTRG00000018162) #15 BYSL (ENSPTRG00000018163) #16 CCND3 (ENSPTRG00000018164) #17 TAF8 (ENSPTRG00000018165) #18 C6H6orf132 (ENSPTRG00000018166) #19 GUCA1ANB (ENSPTRG00000044074) #22 GUCA1A (ENSPTRG00000018167) #21 GUCA1B (ENSPTRG00000018168) #23 MRPS10 (ENSPTRG00000018169) #24 TRERF1 (ENSPTRG00000018170) #25 ENSPTRG00000048021 ENSPTRG00000044341 #26 UBR2 (ENSPTRG00000018171) #27 ENSPTRG00000043287 PRPH2 (ENSPTRG00000018172) #28 TBCC (ENSPTRG00000018173) #29 BICRAL (ENSPTRG00000018174) #30 RPL7L1 (ENSPTRG00000018175) #31 PTCRA (ENSPTRG00000018176) #33 CNPY3 (ENSPTRG00000018177) #34 ENSPTRG00000029670 Bonobo MODERN SPECIES 19 TREM1 (ENSPPAG00000041252) NCR2 (ENSPPAG00000023463) FOXP4 (ENSPPAG00000040751) #7 MDFI (ENSPPAG00000037978) #8 TFEB (ENSPPAG00000038219) #9 PGC (ENSPPAG00000043009) #10 FRS3 (ENSPPAG00000041989) #11 PRICKLE4 (ENSPPAG00000035806) #12 USP49 (ENSPPAG00000018338) #14 ENSPPAG00000005179 MED20 (ENSPPAG00000033578) #15 BYSL (ENSPPAG00000028063) #16 CCND3 (ENSPPAG00000028061) #17 ENSPPAG00000003755 #18 C6orf132 (ENSPPAG00000029653) #19 GUCA1ANB (ENSPPAG00000041508) #22 GUCA1A (ENSPPAG00000038612) #21 GUCA1B (ENSPPAG00000028630) #23 MRPS10 (ENSPPAG00000041229) #24 TRERF1 (ENSPPAG00000032564) #25 ENSPPAG00000000666 #26 UBR2 (ENSPPAG00000028429) #27 ENSPPAG00000041554 PRPH2 (ENSPPAG00000035254) #28 TBCC (ENSPPAG00000005383) #29 BICRAL (ENSPPAG00000041829) #30 ENSPPAG00000028326 #31 C6orf226 (ENSPPAG00000021377) #32 PTCRA (ENSPPAG00000039945) #33 CNPY3 (ENSPPAG00000036349) #34 GNMT (ENSPPAG00000000924) #35 Human MODERN SPECIES 18 TREM1 (ENSG00000124731) NCR2 (ENSG00000096264) FOXP4 (ENSG00000137166) #7 MDFI (ENSG00000112559) #8 TFEB (ENSG00000112561) #9 PGC (ENSG00000096088) #10 FRS3 (ENSG00000137218) #11 PRICKLE4 (ENSG00000278224) #12 TOMM6 (ENSG00000214736) #13 USP49 (ENSG00000164663) #14 MED20 (ENSG00000124641) #15 BYSL (ENSG00000112578) #16 CCND3 (ENSG00000112576) #17 TAF8 (ENSG00000137413) #18 C6orf132 (ENSG00000188112) #19 GUCA1ANB (ENSG00000287363) #22 ENSG00000290147 GUCA1A (ENSG00000048545) #21 GUCA1B (ENSG00000112599) #23 MRPS10 (ENSG00000048544) #24 TRERF1 (ENSG00000124496) #25 UBR2 (ENSG00000024048) #27 PRPH2 (ENSG00000112619) #28 TBCC (ENSG00000124659) #29 BICRAL (ENSG00000112624) #30 RPL7L1 (ENSG00000146223) #31 C6orf226 (ENSG00000221821) #32 PTCRA (ENSG00000171611) #33 CNPY3 (ENSG00000137161) #34 GNMT (ENSG00000124713) #35 PEX6 (ENSG00000124587) #36 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00910000147470 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.a.a ##31 ENSGT00440000034488 #32 ENSGT00950000182878.b.b.`b.b ##31 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.h #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.a.a.b.b ##31 ENSGT00440000034488 #32 ENSGT00950000182878.b.b.`b.b.a ##31 ENSGT00390000007712 #33 Vervet Monkey MODERN SPECIES 8 TREML4 (ENSCSAG00000011253) TREM1 (ENSCSAG00000011258) FOXP4 (ENSCSAG00000011262) #7 MDFI (ENSCSAG00000011270) #8 TFEB (ENSCSAG00000011274) #9 PGC (ENSCSAG00000011279) #10 FRS3 (ENSCSAG00000011283) #11 PRICKLE4 (ENSCSAG00000011286) #12 TOMM6 (ENSCSAG00000011289) #13 USP49 (ENSCSAG00000011293) #14 MED20 (ENSCSAG00000011299) #15 BYSL (ENSCSAG00000011306) #16 CCND3 (ENSCSAG00000011312) #17 TAF8 (ENSCSAG00000011346) ##18 C6orf132 (ENSCSAG00000011367) #19 GUCA1ANB (ENSCSAG00000011377) #22 GUCA1A (ENSCSAG00000011389) #21 GUCA1B (ENSCSAG00000011404) #23 MRPS10 (ENSCSAG00000011412) #24 TRERF1 (ENSCSAG00000011422) #25 UBR2 (ENSCSAG00000011442) #27 PRPH2 (ENSCSAG00000011454) #28 ENSCSAG00000019300 BICRAL (ENSCSAG00000011469) #30 ENSCSAG00000011487 ##31 PTCRA (ENSCSAG00000011495) #33 CNPY3 (ENSCSAG00000011504) #34 GNMT (ENSCSAG00000011512) #35 PEX6 (ENSCSAG00000011522) #36 PPP2R5D (ENSCSAG00000011537) #37 MEA1 (ENSCSAG00000011526) Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.h #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00550000074873.b ENSGT00940000154400.a.b ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.a.a.b.b ##31 ENSGT00440000034488 #32 Cercopithecinae_b ANCESTRAL SPECIES 18 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.h #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00570000081157 #26 ENSGT00950000183075.a.a.a.a #27 ENSGT00910000147272 ENSGT00940000157303 #28 ENSGT00550000074873.b ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.a.a.b.b ##31 ENSGT00440000034488 #32 ENSGT00950000182878.b.b.`b.b.a ##31 Olive baboon MODERN SPECIES 16 TREM1 (ENSPANG00000015746) NCR2 (ENSPANG00000007120) FOXP4 (ENSPANG00000018703) #7 MDFI (ENSPANG00000021605) #8 TFEB (ENSPANG00000009713) #9 PGC (ENSPANG00000001300) #10 FRS3 (ENSPANG00000017337) #11 PRICKLE4 (ENSPANG00000017338) #12 TOMM6 (ENSPANG00000048754) #13 USP49 (ENSPANG00000018044) #14 MED20 (ENSPANG00000021506) #15 BYSL (ENSPANG00000041019) #16 CCND3 (ENSPANG00000022611) #17 TAF8 (ENSPANG00000016963) #18 C6orf132 (ENSPANG00000040893) #19 GUCA1ANB (ENSPANG00000021577) #22 GUCA1A (ENSPANG00000042377) #21 GUCA1B (ENSPANG00000024034) #23 MRPS10 (ENSPANG00000037120) #24 TRERF1 (ENSPANG00000009451) #25 ENSPANG00000047444 #26 UBR2 (ENSPANG00000011151) #27 PRPH2 (ENSPANG00000018347) #28 ENSPANG00000049589 TBCC (ENSPANG00000025697) #29 BICRAL (ENSPANG00000009449) #30 ENSPANG00000008439 ##31 CNPY3 (ENSPANG00000022346) #34 GNMT (ENSPANG00000022693) #35 PEX6 (ENSPANG00000024222) #36 PPP2R5D (ENSPANG00000000811) #37 Macaca ANCESTRAL SPECIES 9 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.h #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00550000074873.b ENSGT00940000154400.a.b ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.a.a.b.b ##31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Macaca_a ANCESTRAL SPECIES 9 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.h #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000166143.A.a.b.a.b.a.a.a.b ENSGT00940000157303 #28 ENSGT00550000074873.b ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.a.a.b.b ##31 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Rhesus MODERN SPECIES 14 TREML2 (ENSMMUG00000049500) TREM1 (ENSMMUG00000003674) NCR2 (ENSMMUG00000003675) ENSMMUG00000063258 FOXP4 (ENSMMUG00000019985) #7 MDFI (ENSMMUG00000009449) #8 TFEB (ENSMMUG00000004690) #9 PGC (ENSMMUG00000048466) #10 FRS3 (ENSMMUG00000012417) #11 PRICKLE4 (ENSMMUG00000012419) #12 USP49 (ENSMMUG00000012421) #14 BYSL (ENSMMUG00000004416) #16 CCND3 (ENSMMUG00000004419) #17 TAF8 (ENSMMUG00000012470) #18 C4H6orf132 (ENSMMUG00000042009) #19 GUCA1ANB (ENSMMUG00000047592) #22 GUCA1A (ENSMMUG00000000872) #21 GUCA1B (ENSMMUG00000003999) #23 TRERF1 (ENSMMUG00000005575) #25 UBR2 (ENSMMUG00000005675) #27 ENSMMUG00000059702 PRPH2 (ENSMMUG00000057019) #28 ENSMMUG00000005679 TBCC (ENSMMUG00000001305) #29 BICRAL (ENSMMUG00000029682) #30 ENSMMUG00000053755 RPL7L1 (ENSMMUG00000021313) ##31 ENSMMUG00000056117 PTCRA (ENSMMUG00000000460) #33 CNPY3 (ENSMMUG00000058425) #34 GNMT (ENSMMUG00000001393) #35 Crab-eating macaque MODERN SPECIES 14 FOXP4 (ENSMFAG00000033620) #7 MDFI (ENSMFAG00000004961) #8 TFEB (ENSMFAG00000040195) #9 PGC (ENSMFAG00000038363) #10 FRS3 (ENSMFAG00000037819) #11 PRICKLE4 (ENSMFAG00000034421) #12 TOMM6 (ENSMFAG00000028918) #13 MED20 (ENSMFAG00000057486) #15 BYSL (ENSMFAG00000033214) #16 USP49 (ENSMFAG00000040586) #14 CCND3 (ENSMFAG00000039022) #17 ENSMFAG00000048664 TAF8 (ENSMFAG00000037574) #18 ENSMFAG00000044246 ENSMFAG00000065376 #20 ENSMFAG00000003087 #22 GUCA1A (ENSMFAG00000035647) #21 GUCA1B (ENSMFAG00000031539) #23 MRPS10 (ENSMFAG00000046129) #24 ENSMFAG00000061896 TRERF1 (ENSMFAG00000045736) #25 UBR2 (ENSMFAG00000041378) #27 ENSMFAG00000063980 PRPH2 (ENSMFAG00000037918) #28 TBCC (ENSMFAG00000003179) #29 BICRAL (ENSMFAG00000001446) #30 ENSMFAG00000054119 RPL7L1 (ENSMFAG00000053469) ##31 CNPY3 (ENSMFAG00000030669) #34 GNMT (ENSMFAG00000045063) #35 PEX6 (ENSMFAG00000034586) #36 Pig-tailed macaque MODERN SPECIES 157 TREML4 (ENSMNEG00000038195) TREM1 (ENSMNEG00000006419) NCR2 (ENSMNEG00000044377) FOXP4 (ENSMNEG00000002954) #7 MDFI (ENSMNEG00000036442) #8 TFEB (ENSMNEG00000036203) #9 PGC (ENSMNEG00000028197) #10 FRS3 (ENSMNEG00000023654) #11 ENSMNEG00000037078 #13 PRICKLE4 (ENSMNEG00000037818) #12 USP49 (ENSMNEG00000043085) #14 BYSL (ENSMNEG00000043045) #16 CCND3 (ENSMNEG00000037933) #17 TAF8 (ENSMNEG00000037201) #18 C6orf132 (ENSMNEG00000031453) #19 GUCA1ANB (ENSMNEG00000030746) #22 GUCA1A (ENSMNEG00000032487) #21 GUCA1B (ENSMNEG00000039223) #23 MRPS10 (ENSMNEG00000041503) #24 TRERF1 (ENSMNEG00000042787) #25 UBR2 (ENSMNEG00000044587) #27 PRPH2 (ENSMNEG00000042503) #28 ENSMNEG00000000026 ENSMNEG00000029388 TBCC (ENSMNEG00000029588) #29 BICRAL (ENSMNEG00000038559) #30 ENSMNEG00000033812 ##31 PTCRA (ENSMNEG00000033559) #33 CNPY3 (ENSMNEG00000044020) #34 GNMT (ENSMNEG00000036639) #35 PEX6 (ENSMNEG00000039925) #36 Rhinopithecus ANCESTRAL SPECIES 26 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000164010 #20 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00910000147470 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.`b.a.b.a.a.c.b.a ##31 ENSGT00950000182878.b.b.`b.a.b.a.a.c.a ##31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 Black snub-nosed monkey MODERN SPECIES 593 NCR2 (ENSRBIG00000040162) FOXP4 (ENSRBIG00000032681) #7 MDFI (ENSRBIG00000041804) #8 TFEB (ENSRBIG00000007714) #9 PGC (ENSRBIG00000038339) #10 FRS3 (ENSRBIG00000031884) #11 ENSRBIG00000035540 #13 PRICKLE4 (ENSRBIG00000034766) #12 USP49 (ENSRBIG00000040256) #14 MED20 (ENSRBIG00000025814) #15 BYSL (ENSRBIG00000030183) #16 CCND3 (ENSRBIG00000037954) #17 TAF8 (ENSRBIG00000040154) #18 C6orf132 (ENSRBIG00000040715) #19 GUCA1ANB (ENSRBIG00000033615) #22 GUCA1A (ENSRBIG00000037690) #21 GUCA1B (ENSRBIG00000038802) #23 MRPS10 (ENSRBIG00000034975) #24 ENSRBIG00000033519 TRERF1 (ENSRBIG00000030162) #25 UBR2 (ENSRBIG00000039033) #27 PRPH2 (ENSRBIG00000043861) #28 TBCC (ENSRBIG00000003966) #29 BICRAL (ENSRBIG00000038859) #30 ENSRBIG00000041359 ##31 PTCRA (ENSRBIG00000008300) #33 CNPY3 (ENSRBIG00000044857) #34 GNMT (ENSRBIG00000044856) #35 PEX6 (ENSRBIG00000027362) #36 PPP2R5D (ENSRBIG00000026732) #37 Platyrrhini ANCESTRAL SPECIES 2 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.f #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.cb.b.a #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Cebidae ANCESTRAL SPECIES 5 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.f #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.cb.b.a #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Cebidae_a ANCESTRAL SPECIES 25 ENSGT00940000153835.a.b.c.a.a ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00910000146996 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.cb.b.a #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 49 TREML4 (ENSSBOG00000013316) TREM1 (ENSSBOG00000022642) NCR2 (ENSSBOG00000001345) FOXP4 (ENSSBOG00000031733) #7 MDFI (ENSSBOG00000025433) #8 TFEB (ENSSBOG00000030350) #9 PGC (ENSSBOG00000024240) #10 FRS3 (ENSSBOG00000034869) #11 PRICKLE4 (ENSSBOG00000018251) #12 USP49 (ENSSBOG00000000054) #14 MED20 (ENSSBOG00000028787) #15 BYSL (ENSSBOG00000034517) #16 CCND3 (ENSSBOG00000021250) #17 TAF8 (ENSSBOG00000025407) #18 C6orf132 (ENSSBOG00000023219) #19 ENSSBOG00000028532 #22 GUCA1A (ENSSBOG00000031079) #21 GUCA1B (ENSSBOG00000034300) #23 MRPS10 (ENSSBOG00000022651) #24 ENSSBOG00000020519 TRERF1 (ENSSBOG00000030453) #25 UBR2 (ENSSBOG00000032257) #27 PRPH2 (ENSSBOG00000022403) #28 BICRAL (ENSSBOG00000033360) #30 PTCRA (ENSSBOG00000025093) #33 CNPY3 (ENSSBOG00000035845) #34 GNMT (ENSSBOG00000023382) #35 PEX6 (ENSSBOG00000021202) #36 ENSSBOG00000020796 PPP2R5D (ENSSBOG00000033250) #37 ENSSBOG00000000614 Bolivian squirrel monkey MODERN SPECIES 10 ENSSBOG00000028362 #22 Capuchin MODERN SPECIES 197 TREM1 (ENSCCAG00000035739) NCR2 (ENSCCAG00000018571) FOXP4 (ENSCCAG00000021468) #7 MDFI (ENSCCAG00000021635) #8 TFEB (ENSCCAG00000036755) #9 PGC (ENSCCAG00000032433) #10 FRS3 (ENSCCAG00000023089) #11 PRICKLE4 (ENSCCAG00000035589) #12 USP49 (ENSCCAG00000035356) #14 MED20 (ENSCCAG00000025677) #15 BYSL (ENSCCAG00000036583) #16 CCND3 (ENSCCAG00000023865) #17 ENSCCAG00000032788 TAF8 (ENSCCAG00000019516) #18 C6orf132 (ENSCCAG00000020133) #19 GUCA1ANB (ENSCCAG00000036979) #22 GUCA1A (ENSCCAG00000034483) #21 GUCA1B (ENSCCAG00000034846) #23 MRPS10 (ENSCCAG00000037430) #24 TRERF1 (ENSCCAG00000037441) #25 UBR2 (ENSCCAG00000027347) #27 PRPH2 (ENSCCAG00000035220) #28 BICRAL (ENSCCAG00000022238) #30 ENSCCAG00000026245 #31 C6orf226 (ENSCCAG00000028662) #32 PTCRA (ENSCCAG00000027445) #33 CNPY3 (ENSCCAG00000031450) #34 PEX6 (ENSCCAG00000029488) #36 GNMT (ENSCCAG00000035170) #35 PPP2R5D (ENSCCAG00000021529) #37 ENSCCAG00000032843 Marmoset MODERN SPECIES 16 MDFI (ENSCJAG00000044429) #8 TFEB (ENSCJAG00000004199) #9 PGC (ENSCJAG00000004226) #10 FRS3 (ENSCJAG00000004240) #11 PRICKLE4 (ENSCJAG00000004246) #12 ENSCJAG00000081865 #13 USP49 (ENSCJAG00000004251) #14 MED20 (ENSCJAG00000004259) #15 BYSL (ENSCJAG00000004266) #16 CCND3 (ENSCJAG00000004284) #17 ENSCJAG00000084284 ENSCJAG00000070491 ENSCJAG00000083522 TAF8 (ENSCJAG00000004292) #18 C6orf132 (ENSCJAG00000039441) #19 GUCA1ANB (ENSCJAG00000042922) #22 GUCA1A (ENSCJAG00000004301) #21 GUCA1B (ENSCJAG00000070620) #23 MRPS10 (ENSCJAG00000075253) #24 TRERF1 (ENSCJAG00000004347) #25 UBR2 (ENSCJAG00000004399) #27 PRPH2 (ENSCJAG00000004580) #28 ENSCJAG00000074599 #29 BICRAL (ENSCJAG00000004594) #30 ENSCJAG00000004637 #31 C6orf226 (ENSCJAG00000023341) #32 ENSCJAG00000086222 CNPY3 (ENSCJAG00000004662) #34 GNMT (ENSCJAG00000004675) #35 PEX6 (ENSCJAG00000004684) #36 PPP2R5D (ENSCJAG00000004782) #37 Mas night monkey MODERN SPECIES 882 NCR2 (ENSANAG00000031953) FOXP4 (ENSANAG00000029480) #7 MDFI (ENSANAG00000031928) #8 TFEB (ENSANAG00000035745) #9 PGC (ENSANAG00000033780) #10 FRS3 (ENSANAG00000020838) #11 PRICKLE4 (ENSANAG00000019187) #12 TOMM6 (ENSANAG00000032387) #13 USP49 (ENSANAG00000021297) #14 MED20 (ENSANAG00000030569) #15 BYSL (ENSANAG00000036138) #16 CCND3 (ENSANAG00000027461) #17 TAF8 (ENSANAG00000027075) #18 ENSANAG00000019684 C6orf132 (ENSANAG00000027834) #19 GUCA1ANB (ENSANAG00000021488) #22 GUCA1A (ENSANAG00000019979) #21 GUCA1B (ENSANAG00000037665) #23 MRPS10 (ENSANAG00000034917) #24 ENSANAG00000038064 TRERF1 (ENSANAG00000024278) #25 ENSANAG00000022408 UBR2 (ENSANAG00000029753) #27 PRPH2 (ENSANAG00000023340) #28 BICRAL (ENSANAG00000036073) #30 ENSANAG00000024167 #31 PTCRA (ENSANAG00000025975) #33 CNPY3 (ENSANAG00000023982) #34 GNMT (ENSANAG00000021291) #35 PEX6 (ENSANAG00000032772) #36 ENSANAG00000033080 Tarsier MODERN SPECIES 5193 FOXP4 (ENSTSYG00000030741) #7 MDFI (ENSTSYG00000006245) #8 TFEB (ENSTSYG00000030287) #9 PGC (ENSTSYG00000031976) #10 FRS3 (ENSTSYG00000001230) #11 PRICKLE4 (ENSTSYG00000037133) #12 TOMM6 (ENSTSYG00000036201) #13 USP49 (ENSTSYG00000014109) #14 MED20 (ENSTSYG00000008567) #15 BYSL (ENSTSYG00000029904) #16 CCND3 (ENSTSYG00000001391) #17 ENSTSYG00000036050 TAF8 (ENSTSYG00000007576) #18 ENSTSYG00000008103 GUCA1ANB (ENSTSYG00000034451) #22 GUCA1A (ENSTSYG00000029875) #21 GUCA1B (ENSTSYG00000006949) #23 MRPS10 (ENSTSYG00000028450) #24 TRERF1 (ENSTSYG00000003874) #25 UBR2 (ENSTSYG00000011535) #27 PRPH2 (ENSTSYG00000011558) #28 SRCIN1 (ENSTSYG00000033236) Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Lemuriformes ANCESTRAL SPECIES 3 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000168448 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.w.b.a.b #31 ENSGT00940000167232 ENSGT00950000182878.b.b.w.a #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Mouse lemur MODERN SPECIES 28 ENSMICG00000033947 ENSMICG00000042409 NCR2 (ENSMICG00000013695) FOXP4 (ENSMICG00000036858) #7 MDFI (ENSMICG00000015669) #8 TFEB (ENSMICG00000015674) #9 ENSMICG00000041517 #10 FRS3 (ENSMICG00000006286) #11 PRICKLE4 (ENSMICG00000015699) #12 TOMM6 (ENSMICG00000047932) #13 USP49 (ENSMICG00000033911) #14 BYSL (ENSMICG00000011347) #16 CCND3 (ENSMICG00000027138) #17 ENSMICG00000011353 #18 ENSMICG00000044021 GUCA1ANB (ENSMICG00000029430) #22 GUCA1A (ENSMICG00000011368) #21 GUCA1B (ENSMICG00000047497) #23 MRPS10 (ENSMICG00000011379) #24 TRERF1 (ENSMICG00000011387) #25 ENSMICG00000044890 UBR2 (ENSMICG00000003745) #27 PRPH2 (ENSMICG00000044138) #28 BICRAL (ENSMICG00000003774) #30 ENSMICG00000047101 #31 ENSMICG00000003791 PTCRA (ENSMICG00000008212) #33 ENSMICG00000036185 CNPY3 (ENSMICG00000042564) #34 GNMT (ENSMICG00000008225) #35 PEX6 (ENSMICG00000008232) #36 Lemuriformes_a ANCESTRAL SPECIES 4 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567.f #18 ENSGT00940000168448 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.w.a.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Coquerels sifaka MODERN SPECIES 209 ENSPCOG00000000279 NCR2 (ENSPCOG00000008841) FOXP4 (ENSPCOG00000024346) #7 MDFI (ENSPCOG00000021967) #8 TFEB (ENSPCOG00000006243) #9 PGC (ENSPCOG00000028478) #10 FRS3 (ENSPCOG00000010536) #11 PRICKLE4 (ENSPCOG00000014324) #12 TOMM6 (ENSPCOG00000000127) #13 USP49 (ENSPCOG00000026508) #14 MED20 (ENSPCOG00000014401) #15 ENSPCOG00000020727 #16 ENSPCOG00000022903 #17 TAF8 (ENSPCOG00000024880) #18 ENSPCOG00000021266 GUCA1ANB (ENSPCOG00000023632) #22 GUCA1A (ENSPCOG00000028552) #21 GUCA1B (ENSPCOG00000026339) #23 MRPS10 (ENSPCOG00000023681) #24 TRERF1 (ENSPCOG00000014905) #25 ENSPCOG00000022503 #27 PRPH2 (ENSPCOG00000018870) #28 BICRAL (ENSPCOG00000025959) #30 ENSPCOG00000014928 #31 PTCRA (ENSPCOG00000021697) #33 CNPY3 (ENSPCOG00000016021) #34 GNMT (ENSPCOG00000020942) #35 PEX6 (ENSPCOG00000017469) #36 PPP2R5D (ENSPCOG00000021120) #37 MEA1 (ENSPCOG00000008221) KLHDC3 (ENSPCOG00000024925) Greater bamboo lemur MODERN SPECIES 305 NCR2 (ENSPSMG00000014933) FOXP4 (ENSPSMG00000015073) #7 MDFI (ENSPSMG00000015258) #8 TFEB (ENSPSMG00000015301) #9 PGC (ENSPSMG00000015312) #10 FRS3 (ENSPSMG00000015327) #11 PRICKLE4 (ENSPSMG00000015341) #12 ENSPSMG00000015344 #13 USP49 (ENSPSMG00000015351) #14 ENSPSMG00000015365 MED20 (ENSPSMG00000015394) #15 BYSL (ENSPSMG00000015433) #16 CCND3 (ENSPSMG00000015483) #17 TAF8 (ENSPSMG00000015571) #18 ENSPSMG00000015586 GUCA1ANB (ENSPSMG00000015588) #22 GUCA1A (ENSPSMG00000015595) #21 GUCA1B (ENSPSMG00000015611) #23 MRPS10 (ENSPSMG00000015628) #24 TRERF1 (ENSPSMG00000015749) #25 ENSPSMG00000015803 ENSPSMG00000015807 UBR2 (ENSPSMG00000016053) #27 PRPH2 (ENSPSMG00000016187) #28 TBCC (ENSPSMG00000016192) #29 BICRAL (ENSPSMG00000016204) #30 ENSPSMG00000016210 CNPY3 (ENSPSMG00000016229) #34 GNMT (ENSPSMG00000016245) #35 PEX6 (ENSPSMG00000016272) #36 PPP2R5D (ENSPSMG00000016658) #37 Bushbaby MODERN SPECIES 146 NCR2 (ENSOGAG00000015254) FOXP4 (ENSOGAG00000010113) #7 MDFI (ENSOGAG00000010114) #8 TFEB (ENSOGAG00000010116) #9 PGC (ENSOGAG00000015217) #10 FRS3 (ENSOGAG00000013038) #11 PRICKLE4 (ENSOGAG00000015219) #12 TOMM6 (ENSOGAG00000027968) #13 USP49 (ENSOGAG00000015223) #14 MED20 (ENSOGAG00000015228) #15 BYSL (ENSOGAG00000015234) #16 CCND3 (ENSOGAG00000028111) #17 ENSOGAG00000033136 TAF8 (ENSOGAG00000016885) #18 C6orf132 (ENSOGAG00000031300) #19 GUCA1ANB (ENSOGAG00000034714) #22 GUCA1A (ENSOGAG00000016889) #21 GUCA1B (ENSOGAG00000016891) #23 MRPS10 (ENSOGAG00000016892) #24 TRERF1 (ENSOGAG00000025610) #25 UBR2 (ENSOGAG00000012644) #27 PRPH2 (ENSOGAG00000012661) #28 TBCC (ENSOGAG00000028970) #29 BICRAL (ENSOGAG00000012664) #30 ENSOGAG00000012671 #31 PTCRA (ENSOGAG00000012675) #33 CNPY3 (ENSOGAG00000024957) #34 ENSOGAG00000034570 GNMT (ENSOGAG00000012676) #35 PEX6 (ENSOGAG00000012681) #36 PPP2R5D (ENSOGAG00000012686) #37 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Glires ANCESTRAL SPECIES 5 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Rodentia ANCESTRAL SPECIES 6 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Rodentia_A ANCESTRAL SPECIES 8 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Hystricomorpha ANCESTRAL SPECIES 1 ENSGT00470000042299 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00940000164010 #20 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Hystricomorpha_a ANCESTRAL SPECIES 3 ENSGT00470000042299 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00940000164010 #20 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 ENSGT00940000157952 Guinea pig MODERN SPECIES 15 ENSCPOG00000038425 ENSCPOG00000032015 FOXP4 (ENSCPOG00000022669) #7 MDFI (ENSCPOG00000011270) #8 TFEB (ENSCPOG00000008027) #9 Pgc (ENSCPOG00000007183) #10 FRS3 (ENSCPOG00000009128) #11 PRICKLE4 (ENSCPOG00000025180) #12 TOMM6 (ENSCPOG00000026731) #13 USP49 (ENSCPOG00000014200) #14 MED20 (ENSCPOG00000004401) #15 BYSL (ENSCPOG00000004403) #16 CCND3 (ENSCPOG00000025856) #17 TAF8 (ENSCPOG00000037188) #18 ENSCPOG00000008967 #20 GUCA1ANB (ENSCPOG00000025639) #22 GUCA1A (ENSCPOG00000015715) #21 GUCA1B (ENSCPOG00000009971) #23 MRPS10 (ENSCPOG00000038656) #24 TRERF1 (ENSCPOG00000015717) #25 UBR2 (ENSCPOG00000008040) #27 PRPH2 (ENSCPOG00000008060) #28 BICRAL (ENSCPOG00000005531) #30 RPL7L1 (ENSCPOG00000021189) #31 ENSCPOG00000011961 #33 CNPY3 (ENSCPOG00000024487) #34 GNMT (ENSCPOG00000033341) #35 PEX6 (ENSCPOG00000008867) #36 PPP2R5D (ENSCPOG00000010949) #37 MEA1 (ENSCPOG00000022111) KLHDC3 (ENSCPOG00000020000) Sciuridae ANCESTRAL SPECIES 1 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Marmotini ANCESTRAL SPECIES 18 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626.g.a.a #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Alpin marmot MODERN SPECIES 20 MDFI (ENSMMMG00000024477) #8 TFEB (ENSMMMG00000024479) #9 ENSMMMG00000024480 #10 ENSMMMG00000024481 #10 ENSMMMG00000024482 #10 ENSMMMG00000024483 ENSMMMG00000024484 #10 FRS3 (ENSMMMG00000024485) #11 TOMM6 (ENSMMMG00000024487) #13 USP49 (ENSMMMG00000024489) #14 MED20 (ENSMMMG00000024491) #15 BYSL (ENSMMMG00000024493) #16 CCND3 (ENSMMMG00000024495) #17 TAF8 (ENSMMMG00000024498) #18 C6orf132 (ENSMMMG00000024504) #19 GUCA1ANB (ENSMMMG00000024506) #22 GUCA1A (ENSMMMG00000024507) #21 GUCA1B (ENSMMMG00000024508) #23 MRPS10 (ENSMMMG00000024510) #24 TRERF1 (ENSMMMG00000024512) #25 UBR2 (ENSMMMG00000024514) #27 ENSMMMG00000024515 PRPH2 (ENSMMMG00000024516) #28 TBCC (ENSMMMG00000024517) #29 BICRAL (ENSMMMG00000024518) #30 ENSMMMG00000024521 #31 ENSMMMG00000024524 #33 CNPY3 (ENSMMMG00000024525) #34 GNMT (ENSMMMG00000024526) #35 PEX6 (ENSMMMG00000024527) #36 PPP2R5D (ENSMMMG00000024528) #37 Marmotini_b ANCESTRAL SPECIES 8 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626.g.a.a #10 ENSGT00940000160626.g.a.b #10 ENSGT00940000160626.h.a #10 ENSGT00940000160626.h.b #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00940000167232 ENSGT00950000182878.b.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Arctic ground squirrel MODERN SPECIES 25 TFEB (ENSUPAG00010017231) #9 ENSUPAG00010017263 #10 ENSUPAG00010017268 #10 ENSUPAG00010017270 #10 ENSUPAG00010017278 #10 FRS3 (ENSUPAG00010017434) #11 PRICKLE4 (ENSUPAG00010017449) #12 TOMM6 (ENSUPAG00010017460) #13 USP49 (ENSUPAG00010017466) #14 ENSUPAG00010017473 MED20 (ENSUPAG00010017477) #15 BYSL (ENSUPAG00010017483) #16 ENSUPAG00010017494 #17 TAF8 (ENSUPAG00010017545) #18 C6orf132 (ENSUPAG00010017552) #19 GUCA1ANB (ENSUPAG00010017561) #22 GUCA1A (ENSUPAG00010017567) #21 GUCA1B (ENSUPAG00010017574) #23 MRPS10 (ENSUPAG00010017579) #24 TRERF1 (ENSUPAG00010017612) #25 UBR2 (ENSUPAG00010017681) #27 PRPH2 (ENSUPAG00010017789) #28 TBCC (ENSUPAG00010017795) #29 BICRAL (ENSUPAG00010017797) #30 ENSUPAG00010017818 ENSUPAG00010017828 ENSUPAG00010017837 #33 CNPY3 (ENSUPAG00010017840) #34 GNMT (ENSUPAG00010017846) #35 PEX6 (ENSUPAG00010017851) #36 PPP2R5D (ENSUPAG00010017909) #37 Squirrel MODERN SPECIES 76 ENSSTOG00000026734 #10 ENSSTOG00000027884 #10 ENSSTOG00000028126 ENSSTOG00000022561 #10 ENSSTOG00000032241 #10 ENSSTOG00000006547 #10 FRS3 (ENSSTOG00000006583) #11 PRICKLE4 (ENSSTOG00000006618) #12 TOMM6 (ENSSTOG00000027205) #13 USP49 (ENSSTOG00000025366) #14 MED20 (ENSSTOG00000015649) #15 BYSL (ENSSTOG00000021848) #16 CCND3 (ENSSTOG00000021553) #17 TAF8 (ENSSTOG00000015660) #18 ENSSTOG00000020834 #20 ENSSTOG00000028530 #22 GUCA1A (ENSSTOG00000023474) #21 GUCA1B (ENSSTOG00000029266) #23 MRPS10 (ENSSTOG00000027016) #24 TRERF1 (ENSSTOG00000022996) #25 UBR2 (ENSSTOG00000025376) #27 PRPH2 (ENSSTOG00000034259) #28 TBCC (ENSSTOG00000009828) #29 BICRAL (ENSSTOG00000009833) #30 ENSSTOG00000033032 RPL7L1 (ENSSTOG00000030480) #31 ENSSTOG00000031403 #33 CNPY3 (ENSSTOG00000027284) #34 GNMT (ENSSTOG00000009464) #35 PEX6 (ENSSTOG00000009471) #36 PPP2R5D (ENSSTOG00000020905) #37 Eurasian red squirrel MODERN SPECIES 16 FOXP4 (ENSSVLG00005011599) #7 MDFI (ENSSVLG00005011488) #8 TFEB (ENSSVLG00005011275) #9 ENSSVLG00005010996 #10 ENSSVLG00005010518 #10 ENSSVLG00005010387 #10 ENSSVLG00005010119 #10 FRS3 (ENSSVLG00005010054) #11 ENSSVLG00005009846 #13 USP49 (ENSSVLG00005009753) #14 MED20 (ENSSVLG00005009716) #15 BYSL (ENSSVLG00005009680) #16 CCND3 (ENSSVLG00005009557) #17 ENSSVLG00005009511 TAF8 (ENSSVLG00005009379) #18 ENSSVLG00005009295 #22 GUCA1A (ENSSVLG00005009248) #21 GUCA1B (ENSSVLG00005009219) #23 MRPS10 (ENSSVLG00005009185) #24 TRERF1 (ENSSVLG00005008763) #25 ENSSVLG00005008700 ENSSVLG00005008679 UBR2 (ENSSVLG00005008573) #27 PRPH2 (ENSSVLG00005008515) #28 TBCC (ENSSVLG00005008498) #29 BICRAL (ENSSVLG00005008432) #30 ENSSVLG00005008408 #31 CNPY3 (ENSSVLG00005008168) #34 GNMT (ENSSVLG00005008120) #35 PEX6 (ENSSVLG00005008076) #36 PPP2R5D (ENSSVLG00005007937) #37 Rodentia_B ANCESTRAL SPECIES 8 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Myomorpha ANCESTRAL SPECIES 11 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Muroidea ANCESTRAL SPECIES 42 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Muroidea_A ANCESTRAL SPECIES 8 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00900000143235 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Cricetidae ANCESTRAL SPECIES 9 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241.i #16 ENSGT00940000160743 #17 ENSGT00390000017567.g #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00900000143235 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Cricetinae ANCESTRAL SPECIES 28 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241.i #16 ENSGT00940000160743 #17 ENSGT00390000017567.g #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00900000143235 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Golden Hamster MODERN SPECIES 649 1700067P10Rik (ENSMAUG00000015408) 1700122O11Rik (ENSMAUG00000015368) Foxp4 (ENSMAUG00000012077) #7 ENSMAUG00000010957 Mdfi (ENSMAUG00000013318) #8 Tfeb (ENSMAUG00000012025) #9 Pgc (ENSMAUG00000009628) #10 Frs3 (ENSMAUG00000014355) #11 Prickle4 (ENSMAUG00000013903) #12 Usp49 (ENSMAUG00000012217) #14 Med20 (ENSMAUG00000011361) #15 Bysl (ENSMAUG00000010845) #16 Ccnd3 (ENSMAUG00000010374) #17 Taf8 (ENSMAUG00000000242) #18 AI661453 (ENSMAUG00000019106) #19 ENSMAUG00000014964 #22 Guca1a (ENSMAUG00000014252) #21 Guca1b (ENSMAUG00000012246) #23 Mrps10 (ENSMAUG00000018141) #24 Trerf1 (ENSMAUG00000016098) #25 Ubr2 (ENSMAUG00000009976) #27 Tbcc (ENSMAUG00000001324) #29 ENSMAUG00000014668 Bicral (ENSMAUG00000014344) #30 Rpl7l1 (ENSMAUG00000010525) #31 2310039H08Rik (ENSMAUG00000010383) #32 Ptcra (ENSMAUG00000017220) #33 Cnpy3 (ENSMAUG00000017045) #34 Gnmt (ENSMAUG00000016515) #35 Pex6 (ENSMAUG00000015976) #36 Ppp2r5d (ENSMAUG00000010413) #37 Chinese hamster chok1gshd MODERN SPECIES 184 Mtch1 (ENSCGRG00001011402) Pi16 (ENSCGRG00001007606) BC004004 (ENSCGRG00001023827) Ppil1 (ENSCGRG00001023664) Cpne5 (ENSCGRG00001022541) Rab44 (ENSCGRG00001019434) Cdkn1a (ENSCGRG00001016153) ENSCGRG00001014666 Stk38 (ENSCGRG00001013681) Kctd20 (ENSCGRG00001012722) ENSCGRG00001010109 #16 ENSCGRG00001006626 #16 Ccnd3 (ENSCGRG00001003998) #17 Taf8 (ENSCGRG00001002329) #18 ENSCGRG00001000427 #20 1700001C19Rik (ENSCGRG00001013888) #22 Guca1a (ENSCGRG00001013312) #21 Guca1b (ENSCGRG00001012958) #23 Mrps10 (ENSCGRG00001007617) #24 Trerf1 (ENSCGRG00001001250) #25 Ubr2 (ENSCGRG00001005446) #27 Prph2 (ENSCGRG00001017570) #28 Tbcc (ENSCGRG00001012387) #29 Bicral (ENSCGRG00001000750) #30 Rpl7l1 (ENSCGRG00001023262) #31 2310039H08Rik (ENSCGRG00001002644) #32 Ptcra (ENSCGRG00001020848) #33 Cnpy3 (ENSCGRG00001024003) #34 Gnmt (ENSCGRG00001020404) #35 Pex6 (ENSCGRG00001014931) #36 ENSCGRG00001011102 #37 Cricetidae_B ANCESTRAL SPECIES 32 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241.i #16 ENSGT00940000160743 #17 ENSGT00390000017567.h #18 ENSGT00390000017567.g #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Prairie vole MODERN SPECIES 352 1700122O11Rik (ENSMOCG00000014775) Foxp4 (ENSMOCG00000021065) #7 Mdfi (ENSMOCG00000018141) #8 Tfeb (ENSMOCG00000001065) #9 Pgc (ENSMOCG00000010583) #10 Frs3 (ENSMOCG00000007370) #11 Prickle4 (ENSMOCG00000003655) #12 Tomm6 (ENSMOCG00000008944) #13 Usp49 (ENSMOCG00000007999) #14 Med20 (ENSMOCG00000013536) #15 Bysl (ENSMOCG00000002210) #16 Ccnd3 (ENSMOCG00000013065) #17 ENSMOCG00000021707 Taf8 (ENSMOCG00000022773) #18 AI661453 (ENSMOCG00000017972) #19 ENSMOCG00000015861 #22 Guca1a (ENSMOCG00000012937) #21 Guca1b (ENSMOCG00000015159) #23 Mrps10 (ENSMOCG00000012423) #24 Trerf1 (ENSMOCG00000006782) #25 Ubr2 (ENSMOCG00000011858) #27 Prph2 (ENSMOCG00000013387) #28 Tbcc (ENSMOCG00000004719) #29 Bicral (ENSMOCG00000011653) #30 Rpl7l1 (ENSMOCG00000020093) #31 Ptcra (ENSMOCG00000013331) #33 Cnpy3 (ENSMOCG00000022685) #34 ENSMOCG00000004686 #35 Pex6 (ENSMOCG00000001645) #36 Ppp2r5d (ENSMOCG00000019501) #37 ENSMOCG00000010358 Northern American deer mouse MODERN SPECIES 13 1700122O11Rik (ENSPEMG00000001711) Foxp4 (ENSPEMG00000022403) #7 Mdfi (ENSPEMG00000023317) #8 Tfeb (ENSPEMG00000023738) #9 Pgc (ENSPEMG00000024008) #10 Frs3 (ENSPEMG00000016427) #11 Prickle4 (ENSPEMG00000010462) #12 Tomm6 (ENSPEMG00000026396) #13 Usp49 (ENSPEMG00000003741) #14 ENSPEMG00000029127 Med20 (ENSPEMG00000006688) #15 Bysl (ENSPEMG00000022283) #16 ENSPEMG00000026066 #17 ENSPEMG00000023347 #18 AI661453 (ENSPEMG00000008630) #19 ENSPEMG00000023958 #22 Guca1a (ENSPEMG00000002406) #21 Guca1b (ENSPEMG00000020343) #23 Mrps10 (ENSPEMG00000021650) #24 Trerf1 (ENSPEMG00000015708) #25 Ubr2 (ENSPEMG00000009594) #27 Prph2 (ENSPEMG00000025130) #28 Tbcc (ENSPEMG00000000808) #29 Bicral (ENSPEMG00000014823) #30 Rpl7l1 (ENSPEMG00000000965) #31 ENSPEMG00000031400 #32 ENSPEMG00000025306 #32 Ptcra (ENSPEMG00000009914) #33 Cnpy3 (ENSPEMG00000013516) #34 Gnmt (ENSPEMG00000011330) #35 Pex6 (ENSPEMG00000001714) #36 Murinae ANCESTRAL SPECIES 9 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00900000143235 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Mus ANCESTRAL SPECIES 16 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00900000143235 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Mus_A ANCESTRAL SPECIES 10 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626.e #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743.m #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00900000143235 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Mus_B ANCESTRAL SPECIES 9 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626.e #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743.m #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00900000143235 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Mus_C ANCESTRAL SPECIES 9 ENSGT01030000234811 ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626.e #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.r #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743.m #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00900000143235 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.p #31 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Steppe mouse MODERN SPECIES 3015 1700122O11Rik (ENSMSIG00000031759) Foxp4 (ENSMSIG00000031750) #7 Mdfi (ENSMSIG00000031746) #8 Tfeb (ENSMSIG00000031743) #9 ENSMSIG00000031742 #10 Frs3 (ENSMSIG00000031741) #11 Prickle4 (ENSMSIG00000031740) #12 Tomm6 (ENSMSIG00000031739) #13 ENSMSIG00000031738 Usp49 (ENSMSIG00000031735) #14 Med20 (ENSMSIG00000031732) #15 Bysl (ENSMSIG00000031729) #16 Ccnd3 (ENSMSIG00000031726) #17 Taf8 (ENSMSIG00000031720) #18 AI661453 (ENSMSIG00000031717) #19 1700001C19Rik (ENSMSIG00000031712) #22 Guca1b (ENSMSIG00000031708) #23 ENSMSIG00000031705 #24 Trerf1 (ENSMSIG00000031638) #25 ENSMSIG00000031635 ENSMSIG00000031634 Ubr2 (ENSMSIG00000031624) #27 Prph2 (ENSMSIG00000031620) #28 Tbcc (ENSMSIG00000031618) #29 spretus MODERN SPECIES 8 Foxp4 (MGP_SPRETEiJ_G0022626) #7 Mdfi (MGP_SPRETEiJ_G0022625) #8 Tfeb (MGP_SPRETEiJ_G0022624) #9 Pgc (MGP_SPRETEiJ_G0022623) #10 Frs3 (MGP_SPRETEiJ_G0022622) #11 MGP_SPRETEiJ_G0022621 #12 MGP_SPRETEiJ_G0022620 #12 Tomm6 (MGP_SPRETEiJ_G0022619) #13 Usp49 (MGP_SPRETEiJ_G0022618) #14 MGP_SPRETEiJ_G0022617 #15 Med20 (MGP_SPRETEiJ_G0022616) #15 Bysl (MGP_SPRETEiJ_G0022615) #16 Ccnd3 (MGP_SPRETEiJ_G0022614) #17 Taf8 (MGP_SPRETEiJ_G0022613) #18 MGP_SPRETEiJ_G0022612 #20 1700001C19Rik (MGP_SPRETEiJ_G0022611) #22 Guca1a (MGP_SPRETEiJ_G0022610) #21 Guca1b (MGP_SPRETEiJ_G0022609) #23 Mrps10 (MGP_SPRETEiJ_G0022608) #24 MGP_SPRETEiJ_G0022607 Ubr2 (MGP_SPRETEiJ_G0022606) #27 Prph2 (MGP_SPRETEiJ_G0022605) #28 Tbcc (MGP_SPRETEiJ_G0022604) #29 MGP_SPRETEiJ_G0022603 Bicral (MGP_SPRETEiJ_G0022602) #30 Rpl7l1 (MGP_SPRETEiJ_G0022601) #31 2310039H08Rik (MGP_SPRETEiJ_G0022600) #32 Ptcra (MGP_SPRETEiJ_G0022599) #33 Cnpy3 (MGP_SPRETEiJ_G0022598) #34 Gnmt (MGP_SPRETEiJ_G0022597) #35 Pex6 (MGP_SPRETEiJ_G0022596) #36 Mouse MODERN SPECIES 8 1700067P10Rik (ENSMUSG00000021545) 1700122O11Rik (ENSMUSG00000094928) Foxp4 (ENSMUSG00000023991) #7 Mdfi (ENSMUSG00000032717) #8 Tfeb (ENSMUSG00000023990) #9 Pgc (ENSMUSG00000023987) #10 Frs3 (ENSMUSG00000023266) #11 Prickle4 (ENSMUSG00000096549) #12 Tomm6 (ENSMUSG00000033475) #13 Usp49 (ENSMUSG00000090115) #14 Med20 (ENSMUSG00000092558) #15 Bysl (ENSMUSG00000023988) #16 Ccnd3 (ENSMUSG00000034165) #17 Taf8 (ENSMUSG00000023980) #18 AI661453 (ENSMUSG00000034382) #19 1700001C19Rik (ENSMUSG00000047150) #22 Guca1a (ENSMUSG00000023982) #21 Guca1b (ENSMUSG00000023979) #23 Mrps10 (ENSMUSG00000034729) #24 Trerf1 (ENSMUSG00000064043) #25 Ubr2 (ENSMUSG00000023977) #27 Prph2 (ENSMUSG00000023978) #28 Tbcc (ENSMUSG00000036430) #29 Bicral (ENSMUSG00000036568) #30 Rpl7l1 (ENSMUSG00000063888) #31 2310039H08Rik (ENSMUSG00000062619) #32 Ptcra (ENSMUSG00000036858) #33 Cnpy3 (ENSMUSG00000023973) #34 Gnmt (ENSMUSG00000002769) #35 Pex6 (ENSMUSG00000002763) #36 Ppp2r5d (ENSMUSG00000059409) #37 Ryukyu mouse MODERN SPECIES 8 Foxp4 (MGP_CAROLIEiJ_G0021714) #7 Mdfi (MGP_CAROLIEiJ_G0021713) #8 Tfeb (MGP_CAROLIEiJ_G0021712) #9 Pgc (MGP_CAROLIEiJ_G0021711) #10 Frs3 (MGP_CAROLIEiJ_G0021710) #11 MGP_CAROLIEiJ_G0021709 #12 MGP_CAROLIEiJ_G0021708 #12 Tomm6 (MGP_CAROLIEiJ_G0021707) #13 Usp49 (MGP_CAROLIEiJ_G0021706) #14 MGP_CAROLIEiJ_G0021705 #15 Med20 (MGP_CAROLIEiJ_G0021704) #15 Bysl (MGP_CAROLIEiJ_G0021703) #16 Ccnd3 (MGP_CAROLIEiJ_G0021702) #17 Taf8 (MGP_CAROLIEiJ_G0021701) #18 AI661453 (MGP_CAROLIEiJ_G0021700) #19 1700001C19Rik (MGP_CAROLIEiJ_G0021699) #22 Guca1a (MGP_CAROLIEiJ_G0021698) #21 MGP_CAROLIEiJ_G0021697 #23 Mrps10 (MGP_CAROLIEiJ_G0021696) #24 MGP_CAROLIEiJ_G0021695 Ubr2 (MGP_CAROLIEiJ_G0021694) #27 Prph2 (MGP_CAROLIEiJ_G0021693) #28 Tbcc (MGP_CAROLIEiJ_G0021692) #29 MGP_CAROLIEiJ_G0021691 Bicral (MGP_CAROLIEiJ_G0021690) #30 Rpl7l1 (MGP_CAROLIEiJ_G0021689) #31 2310039H08Rik (MGP_CAROLIEiJ_G0021688) #32 Ptcra (MGP_CAROLIEiJ_G0021687) #33 Cnpy3 (MGP_CAROLIEiJ_G0021686) #34 Gnmt (MGP_CAROLIEiJ_G0021685) #35 Pex6 (MGP_CAROLIEiJ_G0021684) #36 Shrew mouse MODERN SPECIES 9 Foxp4 (MGP_PahariEiJ_G0020704) #7 Mdfi (MGP_PahariEiJ_G0020703) #8 Tfeb (MGP_PahariEiJ_G0020702) #9 Pgc (MGP_PahariEiJ_G0020701) #10 Frs3 (MGP_PahariEiJ_G0020700) #11 MGP_PahariEiJ_G0020699 #12 MGP_PahariEiJ_G0020698 #12 Tomm6 (MGP_PahariEiJ_G0020697) #13 Usp49 (MGP_PahariEiJ_G0020696) #14 MGP_PahariEiJ_G0020695 #15 Med20 (MGP_PahariEiJ_G0020694) #15 Bysl (MGP_PahariEiJ_G0020693) #16 Ccnd3 (MGP_PahariEiJ_G0020692) #17 Taf8 (MGP_PahariEiJ_G0020691) #18 AI661453 (MGP_PahariEiJ_G0020690) #19 MGP_PahariEiJ_G0020689 #22 Guca1a (MGP_PahariEiJ_G0020688) #21 MGP_PahariEiJ_G0020687 #23 Mrps10 (MGP_PahariEiJ_G0020686) #24 MGP_PahariEiJ_G0020685 Ubr2 (MGP_PahariEiJ_G0020684) #27 Prph2 (MGP_PahariEiJ_G0020683) #28 Tbcc (MGP_PahariEiJ_G0020682) #29 MGP_PahariEiJ_G0020681 #30 Rpl7l1 (MGP_PahariEiJ_G0020680) #31 2310039H08Rik (MGP_PahariEiJ_G0020679) #32 Ptcra (MGP_PahariEiJ_G0020678) #33 Cnpy3 (MGP_PahariEiJ_G0020677) #34 Gnmt (MGP_PahariEiJ_G0020676) #35 Pex6 (MGP_PahariEiJ_G0020675) #36 Ppp2r5d (MGP_PahariEiJ_G0020674) #37 Rat MODERN SPECIES 19 ENSRNOG00000066209 LOC680955 (ENSRNOG00000040095) LOC100911489 (ENSRNOG00000067280) Foxp4 (ENSRNOG00000022804) #7 Mdfi (ENSRNOG00000014987) #8 Tfeb (ENSRNOG00000014666) #9 Pgc (ENSRNOG00000014492) #10 Frs3 (ENSRNOG00000014328) #11 Prickle4 (ENSRNOG00000014180) #12 Usp49 (ENSRNOG00000013866) #14 Med20 (ENSRNOG00000013852) #15 Bysl (ENSRNOG00000049121) #16 Ccnd3 (ENSRNOG00000050258) #17 Taf8 (ENSRNOG00000015249) #18 C9h6orf132 (ENSRNOG00000015297) #19 LOC100912849 (ENSRNOG00000015386) #22 Guca1a (ENSRNOG00000015402) #21 Guca1b (ENSRNOG00000015623) #23 Mrps10 (ENSRNOG00000022609) #24 Trerf1 (ENSRNOG00000022598) #25 Ubr2 (ENSRNOG00000015813) #27 Prph2 (ENSRNOG00000068377) #28 Tbcc (ENSRNOG00000048291) #29 Bicral (ENSRNOG00000016229) #30 Rpl7l1 (ENSRNOG00000016269) #31 LOC681367 (ENSRNOG00000046871) #32 Ptcra (ENSRNOG00000042581) #33 Cnpy3 (ENSRNOG00000016315) #34 Gnmt (ENSRNOG00000016349) #35 Pex6 (ENSRNOG00000016655) #36 Ppp2r5d (ENSRNOG00000016849) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 504 ENSNGAG00000012918 Foxp4 (ENSNGAG00000019301) #7 Mdfi (ENSNGAG00000019621) #8 Tfeb (ENSNGAG00000000739) #9 Pgc (ENSNGAG00000009141) #10 Frs3 (ENSNGAG00000017744) #11 Prickle4 (ENSNGAG00000006023) #12 Tomm6 (ENSNGAG00000016016) #13 Usp49 (ENSNGAG00000017308) #14 Med20 (ENSNGAG00000001431) #15 Bysl (ENSNGAG00000005496) #16 Ccnd3 (ENSNGAG00000007233) #17 Taf8 (ENSNGAG00000001080) #18 ENSNGAG00000015126 #20 ENSNGAG00000019278 #22 Guca1a (ENSNGAG00000005372) #21 ENSNGAG00000005992 #23 Trerf1 (ENSNGAG00000008949) #25 Lesser Egyptian jerboa MODERN SPECIES 41 Treml2 (ENSJJAG00000020018) Trem1 (ENSJJAG00000002311) Foxp4 (ENSJJAG00000012682) #7 Mdfi (ENSJJAG00000011462) #8 Tfeb (ENSJJAG00000006884) #9 Pgc (ENSJJAG00000020186) #10 Frs3 (ENSJJAG00000016510) #11 ENSJJAG00000009681 #12 Tomm6 (ENSJJAG00000014090) #13 Usp49 (ENSJJAG00000010810) #14 Med20 (ENSJJAG00000023488) #15 ENSJJAG00000023129 #16 Ccnd3 (ENSJJAG00000020109) #17 Taf8 (ENSJJAG00000014681) #18 ENSJJAG00000014868 #20 ENSJJAG00000012922 #22 Guca1a (ENSJJAG00000021759) #21 Guca1b (ENSJJAG00000013876) #23 Mrps10 (ENSJJAG00000009159) #24 Trerf1 (ENSJJAG00000017829) #25 Ubr2 (ENSJJAG00000014743) #27 Prph2 (ENSJJAG00000014637) #28 Tbcc (ENSJJAG00000009303) #29 Bicral (ENSJJAG00000023549) #30 Rpl7l1 (ENSJJAG00000023723) #31 Ptcra (ENSJJAG00000003881) #33 Cnpy3 (ENSJJAG00000006773) #34 ENSJJAG00000001038 #35 Pex6 (ENSJJAG00000005949) #36 Ppp2r5d (ENSJJAG00000011011) #37 Mea1 (ENSJJAG00000022932) Kangaroo rat MODERN SPECIES 363 Treml1 (ENSDORG00000002310) Trem2 (ENSDORG00000002311) ENSDORG00000012047 Foxp4 (ENSDORG00000015708) #7 Mdfi (ENSDORG00000015709) #8 ENSDORG00000024734 #9 Pgc (ENSDORG00000007516) #10 Prickle4 (ENSDORG00000001459) #12 ENSDORG00000001463 #13 ENSDORG00000025661 #14 Med20 (ENSDORG00000010967) #15 Bysl (ENSDORG00000010968) #16 Ccnd3 (ENSDORG00000025933) #17 Taf8 (ENSDORG00000012970) #18 ENSDORG00000011144 #20 ENSDORG00000005727 #22 Guca1a (ENSDORG00000023559) #21 Guca1b (ENSDORG00000002076) #23 Mrps10 (ENSDORG00000002081) #24 Trerf1 (ENSDORG00000004758) #25 Ubr2 (ENSDORG00000011936) #27 Prph2 (ENSDORG00000011952) #28 Bicral (ENSDORG00000012173) #30 Rpl7l1 (ENSDORG00000012175) #31 Cnpy3 (ENSDORG00000012177) #34 Gnmt (ENSDORG00000012178) #35 Pex6 (ENSDORG00000012179) #36 Ppp2r5d (ENSDORG00000012182) #37 Mea1 (ENSDORG00000012184) Klhdc3 (ENSDORG00000012185) Rrp36 (ENSDORG00000012186) Lagomorpha ANCESTRAL SPECIES 2 ENSGT00940000153835.a.a ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060.h #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Rabbit MODERN SPECIES 3 TREML2 (ENSOCUG00000007268) ENSOCUG00000011397 ENSOCUG00000029152 ENSOCUG00000033208 MDFI (ENSOCUG00000012322) #8 TFEB (ENSOCUG00000027474) #9 FRS3 (ENSOCUG00000000507) #11 PRICKLE4 (ENSOCUG00000000509) #12 TOMM6 (ENSOCUG00000022642) #13 USP49 (ENSOCUG00000021251) #14 MED20 (ENSOCUG00000017562) #15 ENSOCUG00000017567 #16 CCND3 (ENSOCUG00000017573) #17 TAF8 (ENSOCUG00000009876) #18 C6orf132 (ENSOCUG00000023491) #19 ENSOCUG00000025813 #22 GUCA1A (ENSOCUG00000016325) #21 GUCA1B (ENSOCUG00000024944) #23 ENSOCUG00000038254 MRPS10 (ENSOCUG00000016697) #24 TRERF1 (ENSOCUG00000016703) #25 UBR2 (ENSOCUG00000017960) #27 ENSOCUG00000027455 PRPH2 (ENSOCUG00000017963) #28 ENSOCUG00000022401 ENSOCUG00000017964 #29 BICRAL (ENSOCUG00000013438) #30 ENSOCUG00000003844 #31 CNPY3 (ENSOCUG00000027862) #34 ENSOCUG00000003850 #33 GNMT (ENSOCUG00000003858) #35 Pika MODERN SPECIES 6647 NFE2L2 (ENSOPRG00000013934) TAF8 (ENSOPRG00000013945) #18 GUCA1ANB (ENSOPRG00000018852) #22 GUCA1A (ENSOPRG00000013964) #21 Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT01100000264839 ENSGT00940000164010 #20 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a #31 ENSGT00940000167232 ENSGT00950000182878.b.b.l #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Suina ANCESTRAL SPECIES 17 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Pig MODERN SPECIES 15 ENSSSCG00000001616 TREM1 (ENSSSCG00000033251) ENSSSCG00000001618 FOXP4 (ENSSSCG00000001619) #7 MDFI (ENSSSCG00000001620) #8 TFEB (ENSSSCG00000001621) #9 PGC (ENSSSCG00000001625) #10 FRS3 (ENSSSCG00000001624) #11 PRICKLE4 (ENSSSCG00000050940) #12 USP49 (ENSSSCG00000001629) #14 MED20 (ENSSSCG00000038520) #15 BYSL (ENSSSCG00000026752) #16 CCND3 (ENSSSCG00000032284) #17 TAF8 (ENSSSCG00000022224) #18 C6orf132 (ENSSSCG00000036801) #19 GUCA1ANB (ENSSSCG00000059449) #22 GUCA1A (ENSSSCG00000001636) #21 GUCA1B (ENSSSCG00000001637) #23 MRPS10 (ENSSSCG00000001638) #24 TRERF1 (ENSSSCG00000001639) #25 UBR2 (ENSSSCG00000001641) #27 ENSSSCG00000056881 PRPH2 (ENSSSCG00000031628) #28 TBCC (ENSSSCG00000026741) #29 BICRAL (ENSSSCG00000001646) #30 RPL7L1 (ENSSSCG00000026472) #31 ENSSSCG00000040577 PTCRA (ENSSSCG00000001650) #33 CNPY3 (ENSSSCG00000001651) #34 GNMT (ENSSSCG00000033214) #35 PEX6 (ENSSSCG00000001653) #36 Chacoan peccary MODERN SPECIES 782 TREML2 (ENSCWAG00000004558) ENSCWAG00000004526 ENSCWAG00000004410 FOXP4 (ENSCWAG00000004349) #7 MDFI (ENSCWAG00000004292) #8 TFEB (ENSCWAG00000004198) #9 PGC (ENSCWAG00000004136) #10 FRS3 (ENSCWAG00000004101) #11 PRICKLE4 (ENSCWAG00000004062) #12 TOMM6 (ENSCWAG00000004039) #13 USP49 (ENSCWAG00000003995) #14 MED20 (ENSCWAG00000003967) #15 BYSL (ENSCWAG00000003935) #16 CCND3 (ENSCWAG00000003820) #17 TAF8 (ENSCWAG00000003752) #18 GUCA1ANB (ENSCWAG00000003728) #22 GUCA1A (ENSCWAG00000003703) #21 GUCA1B (ENSCWAG00000003679) #23 MRPS10 (ENSCWAG00000018307) #24 Artiodactyla_a ANCESTRAL SPECIES 19 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Camelidae ANCESTRAL SPECIES 13 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.c.a #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045.m #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a #31 ENSGT00940000167232 ENSGT00440000034488 #32 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Arabian camel MODERN SPECIES 12 NCR2 (ENSCDRG00005016657) ENSCDRG00005016689 FOXP4 (ENSCDRG00005016769) #7 MDFI (ENSCDRG00005017632) #8 TFEB (ENSCDRG00005017674) #9 PGC (ENSCDRG00005017765) #10 FRS3 (ENSCDRG00005017816) #11 PRICKLE4 (ENSCDRG00005017867) #12 ENSCDRG00005017925 #13 USP49 (ENSCDRG00005017949) #14 MED20 (ENSCDRG00005018002) #15 ENSCDRG00005006391 BYSL (ENSCDRG00005006430) #16 CCND3 (ENSCDRG00005006484) #17 TAF8 (ENSCDRG00005006712) #18 GUCA1ANB (ENSCDRG00005006898) #22 GUCA1A (ENSCDRG00005006831) #21 GUCA1B (ENSCDRG00005007146) #23 ENSCDRG00005007198 #24 TRERF1 (ENSCDRG00005007238) #25 UBR2 (ENSCDRG00005007347) #27 PRPH2 (ENSCDRG00005007663) #28 TBCC (ENSCDRG00005007707) #29 BICRAL (ENSCDRG00005007736) #30 RPL7L1 (ENSCDRG00005007818) #31 ENSCDRG00005007853 CNPY3 (ENSCDRG00005008125) #34 GNMT (ENSCDRG00005008180) #35 PEX6 (ENSCDRG00005008247) #36 PPP2R5D (ENSCDRG00005008393) #37 MEA1 (ENSCDRG00005008686) Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Pecora ANCESTRAL SPECIES 21 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Yarkand deer MODERN SPECIES 30 ENSCHYG00000021643 ENSCHYG00000021679 FOXP4 (ENSCHYG00000021715) #7 MDFI (ENSCHYG00000021941) #8 TFEB (ENSCHYG00000022019) #9 PGC (ENSCHYG00000022185) #10 FRS3 (ENSCHYG00000022265) #11 PRICKLE4 (ENSCHYG00000022333) #12 ENSCHYG00000022418 #13 USP49 (ENSCHYG00000022449) #14 MED20 (ENSCHYG00000022551) #15 BYSL (ENSCHYG00000022603) #16 CCND3 (ENSCHYG00000022707) #17 TAF8 (ENSCHYG00000022865) #18 C6orf132 (ENSCHYG00000023077) #19 GUCA1ANB (ENSCHYG00000023137) #22 GUCA1A (ENSCHYG00000023170) #21 ENSCHYG00000023213 #23 TRERF1 (ENSCHYG00000000229) #25 UBR2 (ENSCHYG00000000408) #27 PRPH2 (ENSCHYG00000000711) #28 TBCC (ENSCHYG00000000724) #29 BICRAL (ENSCHYG00000000738) #30 ENSCHYG00000000787 #31 ENSCHYG00000000813 PTCRA (ENSCHYG00000000824) #33 CNPY3 (ENSCHYG00000000840) #34 GNMT (ENSCHYG00000000864) #35 PEX6 (ENSCHYG00000000888) #36 PPP2R5D (ENSCHYG00000000975) #37 ENSCHYG00000001147 Percora_a ANCESTRAL SPECIES 12 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Bovidae ANCESTRAL SPECIES 13 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Bovinae ANCESTRAL SPECIES 9 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060.r #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Bos ANCESTRAL SPECIES 17 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d.e #13 ENSGT00940000157997 #14 ENSGT00390000002060.r #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Bos_a ANCESTRAL SPECIES 11 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d.e #13 ENSGT00940000157997 #14 ENSGT00390000002060.r #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 16 ENSBGRG00000022879 FOXP4 (ENSBGRG00000022828) #7 MDFI (ENSBGRG00000022743) #8 TFEB (ENSBGRG00000022682) #9 PGC (ENSBGRG00000022647) #10 FRS3 (ENSBGRG00000022595) #11 PRICKLE4 (ENSBGRG00000022533) #12 ENSBGRG00000022501 #13 USP49 (ENSBGRG00000022467) #14 MED20 (ENSBGRG00000022427) #15 BYSL (ENSBGRG00000022371) #16 CCND3 (ENSBGRG00000022113) #17 TAF8 (ENSBGRG00000022040) #18 C6orf132 (ENSBGRG00000022013) #19 ENSBGRG00000021988 #22 ENSBGRG00000021973 #22 GUCA1A (ENSBGRG00000021900) #21 GUCA1B (ENSBGRG00000021864) #23 ENSBGRG00000021850 MRPS10 (ENSBGRG00000021770) #24 TRERF1 (ENSBGRG00000021627) #25 UBR2 (ENSBGRG00000021453) #27 PRPH2 (ENSBGRG00000021410) #28 TBCC (ENSBGRG00000021407) #29 BICRAL (ENSBGRG00000021301) #30 ENSBGRG00000021224 #31 ENSBGRG00000021209 ENSBGRG00000021144 #33 CNPY3 (ENSBGRG00000021055) #34 GNMT (ENSBGRG00000021025) #35 PEX6 (ENSBGRG00000020837) #36 Domestic yak MODERN SPECIES 16 ENSBGRG00000022893 ENSBGRG00000022879 FOXP4 (ENSBGRG00000022828) #7 MDFI (ENSBGRG00000022743) #8 TFEB (ENSBGRG00000022682) #9 PGC (ENSBGRG00000022647) #10 FRS3 (ENSBGRG00000022595) #11 PRICKLE4 (ENSBGRG00000022533) #12 ENSBGRG00000022501 #13 USP49 (ENSBGRG00000022467) #14 MED20 (ENSBGRG00000022427) #15 BYSL (ENSBGRG00000022371) #16 CCND3 (ENSBGRG00000022113) #17 TAF8 (ENSBGRG00000022040) #18 C6orf132 (ENSBGRG00000022013) #19 ENSBGRG00000021988 #22 ENSBGRG00000021973 #22 GUCA1A (ENSBGRG00000021900) #21 GUCA1B (ENSBGRG00000021864) #23 ENSBGRG00000021850 MRPS10 (ENSBGRG00000021770) #24 TRERF1 (ENSBGRG00000021627) #25 UBR2 (ENSBGRG00000021453) #27 PRPH2 (ENSBGRG00000021410) #28 TBCC (ENSBGRG00000021407) #29 BICRAL (ENSBGRG00000021301) #30 ENSBGRG00000021224 #31 ENSBGRG00000021209 ENSBGRG00000021144 #33 CNPY3 (ENSBGRG00000021055) #34 GNMT (ENSBGRG00000021025) #35 Wild yak MODERN SPECIES 1156 ENSBMUG00000013908 #16 CCND3 (ENSBMUG00000013874) #17 TAF8 (ENSBMUG00000013819) #18 GUCA1ANB (ENSBMUG00000013778) #22 GUCA1A (ENSBMUG00000013768) #21 GUCA1B (ENSBMUG00000013755) #23 MRPS10 (ENSBMUG00000013745) #24 TRERF1 (ENSBMUG00000013691) #25 UBR2 (ENSBMUG00000013552) #27 PRPH2 (ENSBMUG00000013438) #28 TBCC (ENSBMUG00000013422) #29 BICRAL (ENSBMUG00000013399) #30 ENSBMUG00000013358 #31 ENSBMUG00000013347 PTCRA (ENSBMUG00000013333) #33 CNPY3 (ENSBMUG00000013282) #34 GNMT (ENSBMUG00000013269) #35 PEX6 (ENSBMUG00000013236) #36 PPP2R5D (ENSBMUG00000013174) #37 Bos_b ANCESTRAL SPECIES 8 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d.e #13 ENSGT00940000157997 #14 ENSGT00390000002060.r #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.a.a.a.a.a ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A.a #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Hybrid Bos Indicus MODERN SPECIES 15 ENSBIXG00005009486 ENSBIXG00005009467 ENSBIXG00005009449 ENSBIXG00005000498 FOXP4 (ENSBIXG00005009430) #7 MDFI (ENSBIXG00005009374) #8 TFEB (ENSBIXG00005000479) #9 PGC (ENSBIXG00005000442) #10 FRS3 (ENSBIXG00005009263) #11 PRICKLE4 (ENSBIXG00005009243) #12 USP49 (ENSBIXG00005009223) #14 BYSL (ENSBIXG00005000413) #16 CCND3 (ENSBIXG00005006095) #17 TAF8 (ENSBIXG00005009126) #18 C6orf132 (ENSBIXG00005009101) #19 GUCA1ANB (ENSBIXG00005009098) #22 GUCA1A (ENSBIXG00005009093) #21 GUCA1B (ENSBIXG00005009059) #23 MRPS10 (ENSBIXG00005009037) #24 ENSBIXG00005009021 TRERF1 (ENSBIXG00005009007) #25 UBR2 (ENSBIXG00005008939) #27 ENSBIXG00005008847 PRPH2 (ENSBIXG00005008840) #28 TBCC (ENSBIXG00005000284) #29 BICRAL (ENSBIXG00005008820) #30 ENSBIXG00005008804 #31 ENSBIXG00005008792 PTCRA (ENSBIXG00005008784) #33 CNPY3 (ENSBIXG00005008771) #34 GNMT (ENSBIXG00005008752) #35 Cow MODERN SPECIES 15 TREM1 (ENSBTAG00000017593) ENSBTAG00000050887 FOXP4 (ENSBTAG00000014211) #7 MDFI (ENSBTAG00000019343) #8 TFEB (ENSBTAG00000012384) #9 PGC (ENSBTAG00000003818) #10 FRS3 (ENSBTAG00000009861) #11 PRICKLE4 (ENSBTAG00000038916) #12 TOMM6 (ENSBTAG00000008977) #13 USP49 (ENSBTAG00000008981) #14 MED20 (ENSBTAG00000010100) #15 BYSL (ENSBTAG00000010101) #16 CCND3 (ENSBTAG00000010106) #17 TAF8 (ENSBTAG00000011339) #18 C23H6orf132 (ENSBTAG00000051116) #19 MGC137036 (ENSBTAG00000012822) #22 GUCA1A (ENSBTAG00000051956) #21 GUCA1B (ENSBTAG00000012439) #23 MRPS10 (ENSBTAG00000015301) #24 ENSBTAG00000053124 TRERF1 (ENSBTAG00000015321) #25 UBR2 (ENSBTAG00000005967) #27 PRPH2 (ENSBTAG00000005971) #28 TBCC (ENSBTAG00000000940) #29 BICRAL (ENSBTAG00000014814) #30 RPL7L1 (ENSBTAG00000018478) #31 ENSBTAG00000052790 PTCRA (ENSBTAG00000017097) #33 CNPY3 (ENSBTAG00000015900) #34 GNMT (ENSBTAG00000051534) #35 ENSBTAG00000051935 #34 American bison MODERN SPECIES 3345 TREML2 (ENSBBBG00000004296) ENSBBBG00000017351 ENSBBBG00000017366 FOXP4 (ENSBBBG00000007431) #7 MDFI (ENSBBBG00000017452) #8 TFEB (ENSBBBG00000017522) #9 PGC (ENSBBBG00000004344) #10 FRS3 (ENSBBBG00000017554) #11 PRICKLE4 (ENSBBBG00000007501) #12 TOMM6 (ENSBBBG00000008454) #13 USP49 (ENSBBBG00000017606) #14 MED20 (ENSBBBG00000017618) #15 BYSL (ENSBBBG00000004364) #16 CCND3 (ENSBBBG00000017683) #17 ENSBBBG00000006963 GUCA1ANB (ENSBBBG00000017711) #22 GUCA1A (ENSBBBG00000017728) #21 GUCA1B (ENSBBBG00000017738) #23 MRPS10 (ENSBBBG00000017751) #24 TRERF1 (ENSBBBG00000007621) #25 UBR2 (ENSBBBG00000007799) #27 PRPH2 (ENSBBBG00000017979) #28 TBCC (ENSBBBG00000004425) #29 BICRAL (ENSBBBG00000018018) #30 ENSBBBG00000004435 #31 ENSBBBG00000018041 ENSBBBG00000004438 #33 CNPY3 (ENSBBBG00000018061) #34 GNMT (ENSBBBG00000018085) #35 PEX6 (ENSBBBG00000018126) #36 PPP2R5D (ENSBBBG00000004468) #37 Caprinae ANCESTRAL SPECIES 16 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Goat MODERN SPECIES 15 TREM1 (ENSCHIG00000027075) ENSCHIG00000023956 FOXP4 (ENSCHIG00000007860) #7 MDFI (ENSCHIG00000020376) #8 TFEB (ENSCHIG00000014684) #9 PGC (ENSCHIG00000013333) #10 FRS3 (ENSCHIG00000014434) #11 PRICKLE4 (ENSCHIG00000021416) #12 TOMM6 (ENSCHIG00000013364) #13 USP49 (ENSCHIG00000013872) #14 MED20 (ENSCHIG00000011055) #15 BYSL (ENSCHIG00000017590) #16 CCND3 (ENSCHIG00000026950) #17 TAF8 (ENSCHIG00000018137) #18 C6orf132 (ENSCHIG00000025468) #19 GUCA1ANB (ENSCHIG00000015563) #22 GUCA1A (ENSCHIG00000011263) #21 GUCA1B (ENSCHIG00000013876) #23 MRPS10 (ENSCHIG00000022930) #24 TRERF1 (ENSCHIG00000012508) #25 UBR2 (ENSCHIG00000010493) #27 PRPH2 (ENSCHIG00000017037) #28 TBCC (ENSCHIG00000010738) #29 BICRAL (ENSCHIG00000011817) #30 ENSCHIG00000010307 #31 PTCRA (ENSCHIG00000010829) #33 CNPY3 (ENSCHIG00000015552) #34 GNMT (ENSCHIG00000026364) #35 PEX6 (ENSCHIG00000009174) #36 PPP2R5D (ENSCHIG00000018710) #37 ENSCHIG00000025491 Rambouillet Sheep MODERN SPECIES 12 TREM2 (ENSOARG00020014664) ENSOARG00020014811 ENSOARG00020014842 FOXP4 (ENSOARG00020014880) #7 MDFI (ENSOARG00020015035) #8 TFEB (ENSOARG00020015133) #9 PGC (ENSOARG00020015253) #10 FRS3 (ENSOARG00020015378) #11 PRICKLE4 (ENSOARG00020015416) #12 TOMM6 (ENSOARG00020015489) #13 USP49 (ENSOARG00020015534) #14 MED20 (ENSOARG00020015583) #15 BYSL (ENSOARG00020015632) #16 CCND3 (ENSOARG00020015730) #17 TAF8 (ENSOARG00020016014) #18 GUCA1ANB (ENSOARG00020016330) #22 GUCA1B (ENSOARG00020016431) #23 MRPS10 (ENSOARG00020016487) #24 TRERF1 (ENSOARG00020016521) #25 UBR2 (ENSOARG00020016698) #27 PRPH2 (ENSOARG00020017256) #28 TBCC (ENSOARG00020017312) #29 BICRAL (ENSOARG00020017366) #30 ENSOARG00020017506 #31 ENSOARG00020017595 PTCRA (ENSOARG00020017626) #33 PTK7 (ENSOARG00020017682) CNPY3 (ENSOARG00020018086) #34 GNMT (ENSOARG00020018269) #35 PEX6 (ENSOARG00020018345) #36 PPP2R5D (ENSOARG00020018642) #37 Siberian musk deer MODERN SPECIES 355 TREML2 (ENSMMSG00000009073) ENSMMSG00000009113 FOXP4 (ENSMMSG00000009149) #7 MDFI (ENSMMSG00000009206) #8 TFEB (ENSMMSG00000009290) #9 PGC (ENSMMSG00000009351) #10 FRS3 (ENSMMSG00000009397) #11 PRICKLE4 (ENSMMSG00000009426) #12 ENSMMSG00000009479 #13 USP49 (ENSMMSG00000009496) #14 MED20 (ENSMMSG00000009591) #15 BYSL (ENSMMSG00000009619) #16 CCND3 (ENSMMSG00000009679) #17 TAF8 (ENSMMSG00000010017) #18 C6orf132 (ENSMMSG00000010088) #19 ENSMMSG00000010105 #22 GUCA1A (ENSMMSG00000010121) #21 GUCA1B (ENSMMSG00000010149) #23 MRPS10 (ENSMMSG00000010176) #24 TRERF1 (ENSMMSG00000010234) #25 UBR2 (ENSMMSG00000010934) #27 ENSMMSG00000011915 PRPH2 (ENSMMSG00000011927) #28 TBCC (ENSMMSG00000011946) #29 BICRAL (ENSMMSG00000011972) #30 ENSMMSG00000012034 #31 ENSMMSG00000012048 PTCRA (ENSMMSG00000012068) #33 CNPY3 (ENSMMSG00000004545) #34 GNMT (ENSMMSG00000004609) #35 PEX6 (ENSMMSG00000004652) #36 Cetacea ANCESTRAL SPECIES 7 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b.b #31 ENSGT00940000158912.h.a ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Odontoceti ANCESTRAL SPECIES 5 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045.k #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b.b #31 ENSGT00940000158912.h.a ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045.k #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045.l #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b.b #31 ENSGT00940000167232 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Monodontidae ANCESTRAL SPECIES 4 ENSGT00470000042299 ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045.k #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.a.b.b #31 ENSGT00940000167232 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Beluga whale MODERN SPECIES 8 ENSDLEG00000011115 ENSDLEG00000011149 FOXP4 (ENSDLEG00000011171) #7 MDFI (ENSDLEG00000011255) #8 TFEB (ENSDLEG00000011268) #9 PGC (ENSDLEG00000011283) #10 FRS3 (ENSDLEG00000011377) #11 PRICKLE4 (ENSDLEG00000011395) #12 TOMM6 (ENSDLEG00000011453) #13 USP49 (ENSDLEG00000011464) #14 MED20 (ENSDLEG00000011481) #15 BYSL (ENSDLEG00000011493) #16 CCND3 (ENSDLEG00000011516) #17 TAF8 (ENSDLEG00000011540) #18 C6orf132 (ENSDLEG00000011560) #19 GUCA1ANB (ENSDLEG00000011566) #22 GUCA1A (ENSDLEG00000011574) #21 GUCA1B (ENSDLEG00000011600) #23 MRPS10 (ENSDLEG00000011621) #24 TRERF1 (ENSDLEG00000011641) #25 UBR2 (ENSDLEG00000011696) #27 ENSDLEG00000011821 #28 ENSDLEG00000011831 #28 TBCC (ENSDLEG00000011847) #29 BICRAL (ENSDLEG00000011860) #30 ENSDLEG00000011884 #31 ENSDLEG00000011898 CNPY3 (ENSDLEG00000011909) #34 GNMT (ENSDLEG00000011920) #35 PEX6 (ENSDLEG00000011928) #36 PPP2R5D (ENSDLEG00000012027) #37 Narwhal MODERN SPECIES 310 TREML2 (ENSMMNG00015012981) ENSMMNG00015012963 FOXP4 (ENSMMNG00015012909) #7 MDFI (ENSMMNG00015012881) #8 TFEB (ENSMMNG00015012845) #9 PGC (ENSMMNG00015012820) #10 FRS3 (ENSMMNG00015012812) #11 PRICKLE4 (ENSMMNG00015012804) #12 TOMM6 (ENSMMNG00015012791) #13 USP49 (ENSMMNG00015012776) #14 MED20 (ENSMMNG00015012762) #15 BYSL (ENSMMNG00015012752) #16 CCND3 (ENSMMNG00015012721) #17 TAF8 (ENSMMNG00015012689) #18 C6orf132 (ENSMMNG00015012670) #19 GUCA1ANB (ENSMMNG00015012656) #22 GUCA1A (ENSMMNG00015012644) #21 GUCA1B (ENSMMNG00015012632) #23 MRPS10 (ENSMMNG00015012623) #24 TRERF1 (ENSMMNG00015012602) #25 UBR2 (ENSMMNG00015012496) #27 PRPH2 (ENSMMNG00015012414) #28 TBCC (ENSMMNG00015012403) #29 BICRAL (ENSMMNG00015012360) #30 ENSMMNG00015012328 #31 ENSMMNG00015012315 CNPY3 (ENSMMNG00015012247) #34 GNMT (ENSMMNG00015012227) #35 PEX6 (ENSMMNG00015012200) #36 PPP2R5D (ENSMMNG00015012154) #37 MEA1 (ENSMMNG00015012123) Vaquita MODERN SPECIES 2 ENSPSNG00000010488 ENSPSNG00000010602 FOXP4 (ENSPSNG00000010759) #7 MDFI (ENSPSNG00000011866) #8 TFEB (ENSPSNG00000011981) #9 PGC (ENSPSNG00000012135) #10 FRS3 (ENSPSNG00000012245) #11 PRICKLE4 (ENSPSNG00000012338) #12 TOMM6 (ENSPSNG00000012457) #13 USP49 (ENSPSNG00000012507) #14 MED20 (ENSPSNG00000012672) #15 BYSL (ENSPSNG00000012738) #16 CCND3 (ENSPSNG00000012800) #17 TAF8 (ENSPSNG00000013036) #18 C6orf132 (ENSPSNG00000013160) #19 GUCA1ANB (ENSPSNG00000013195) #22 GUCA1A (ENSPSNG00000013237) #21 GUCA1B (ENSPSNG00000013308) #23 ENSPSNG00000013382 #24 TRERF1 (ENSPSNG00000013444) #25 UBR2 (ENSPSNG00000013703) #27 PRPH2 (ENSPSNG00000013919) #28 TBCC (ENSPSNG00000013993) #29 BICRAL (ENSPSNG00000014055) #30 ENSPSNG00000014219 #31 CNPY3 (ENSPSNG00000014861) #34 GNMT (ENSPSNG00000015036) #35 PEX6 (ENSPSNG00000015144) #36 PPP2R5D (ENSPSNG00000015286) #37 MEA1 (ENSPSNG00000015569) KLHDC3 (ENSPSNG00000015669) Dolphin MODERN SPECIES 2478 ENSTTRG00000014044 ENSTTRG00000014051 #20 GUCA1ANB (ENSTTRG00000014054) #22 GUCA1A (ENSTTRG00000014056) #21 GUCA1B (ENSTTRG00000014060) #23 MRPS10 (ENSTTRG00000014063) #24 TRERF1 (ENSTTRG00000014065) #25 Sperm whale MODERN SPECIES 9 APOBEC2 (ENSPCTG00005021351) OARD1 (ENSPCTG00005021366) NFYA (ENSPCTG00005021420) ENSPCTG00005004346 TREML1 (ENSPCTG00005004442) TREM2 (ENSPCTG00005004514) TREML2 (ENSPCTG00005004549) ENSPCTG00005004578 ENSPCTG00005004605 FOXP4 (ENSPCTG00005004666) #7 MED20 (ENSPCTG00005004839) #15 BYSL (ENSPCTG00005004855) #16 CCND3 (ENSPCTG00005004894) #17 TAF8 (ENSPCTG00005005090) #18 C6orf132 (ENSPCTG00005005133) #19 GUCA1ANB (ENSPCTG00005005159) #22 GUCA1A (ENSPCTG00005005175) #21 GUCA1B (ENSPCTG00005005202) #23 ENSPCTG00005005220 #24 ENSPCTG00005005242 #25 UBR2 (ENSPCTG00005005313) #27 PRPH2 (ENSPCTG00005005569) #28 TBCC (ENSPCTG00005005588) #29 BICRAL (ENSPCTG00005005622) #30 ENSPCTG00005005648 #31 ENSPCTG00005005675 ENSPCTG00005005732 SRF (ENSPCTG00005005770) SLC22A7 (ENSPCTG00005005815) CRIP3 (ENSPCTG00005005915) ZNF318 (ENSPCTG00005006018) Blue whale MODERN SPECIES 2 ENSBMSG00010010389 FOXP4 (ENSBMSG00010010356) #7 MDFI (ENSBMSG00010010338) #8 TFEB (ENSBMSG00010010299) #9 PGC (ENSBMSG00010010276) #10 FRS3 (ENSBMSG00010010261) #11 PRICKLE4 (ENSBMSG00010010242) #12 ENSBMSG00010010229 #13 USP49 (ENSBMSG00010010213) #14 ENSBMSG00010010206 ENSBMSG00010010194 #15 BYSL (ENSBMSG00010010176) #16 CCND3 (ENSBMSG00010010130) #17 TAF8 (ENSBMSG00010010093) #18 C6orf132 (ENSBMSG00010010068) #19 GUCA1ANB (ENSBMSG00010010047) #22 GUCA1A (ENSBMSG00010010030) #21 ENSBMSG00010010003 #23 TRERF1 (ENSBMSG00010009880) #25 ENSBMSG00010009836 ENSBMSG00010009818 #27 ENSBMSG00010009795 #27 ENSBMSG00010009780 PRPH2 (ENSBMSG00010009768) #28 TBCC (ENSBMSG00010009756) #29 BICRAL (ENSBMSG00010009740) #30 ENSBMSG00010009726 #31 ENSBMSG00010009715 ENSBMSG00010009706 PTCRA (ENSBMSG00010009694) #33 CNPY3 (ENSBMSG00010009680) #34 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT01100000264839 ENSGT00940000164010 #20 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l #31 ENSGT00940000167232 ENSGT00950000182878.b.b.k.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 Carnivora ANCESTRAL SPECIES 4 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Caniformia ANCESTRAL SPECIES 3 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Caniformia_b ANCESTRAL SPECIES 6 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Ursidae ANCESTRAL SPECIES 35 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607.d #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303.b #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Ursus ANCESTRAL SPECIES 28 ENSGT00470000042299 ENSGT00940000153835.a.b.c.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00390000014226 #22 ENSGT00940000160607.d #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a.y #27 ENSGT00940000157303.b #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Polar bear MODERN SPECIES 174 TREM1 (ENSUMAG00000012198) ENSUMAG00000012194 ENSUMAG00000012179 FOXP4 (ENSUMAG00000012042) #7 MDFI (ENSUMAG00000012028) #8 TFEB (ENSUMAG00000012024) #9 PGC (ENSUMAG00000012014) #10 FRS3 (ENSUMAG00000012003) #11 ENSUMAG00000011999 #12 ENSUMAG00000012000 #13 USP49 (ENSUMAG00000011995) #14 MED20 (ENSUMAG00000011993) #15 BYSL (ENSUMAG00000011988) #16 CCND3 (ENSUMAG00000011981) #17 TAF8 (ENSUMAG00000011975) #18 GUCA1ANB (ENSUMAG00000011972) #22 GUCA1A (ENSUMAG00000011969) #21 GUCA1B (ENSUMAG00000011967) #23 MRPS10 (ENSUMAG00000011959) #24 TRERF1 (ENSUMAG00000011953) #25 UBR2 (ENSUMAG00000009456) #27 PRPH2 (ENSUMAG00000009271) #28 TBCC (ENSUMAG00000009247) #29 BICRAL (ENSUMAG00000009236) #30 RPL7L1 (ENSUMAG00000009231) #31 ENSUMAG00000009228 #33 CNPY3 (ENSUMAG00000009221) #34 GNMT (ENSUMAG00000009217) #35 PEX6 (ENSUMAG00000009161) #36 MEA1 (ENSUMAG00000009134) PPP2R5D (ENSUMAG00000008781) #37 American black bear MODERN SPECIES 989 MED20 (ENSUAMG00000027837) #15 BYSL (ENSUAMG00000027838) #16 CCND3 (ENSUAMG00000027839) #17 TAF8 (ENSUAMG00000027841) #18 GUCA1ANB (ENSUAMG00000027844) #22 GUCA1A (ENSUAMG00000027845) #21 ENSUAMG00000027846 #24 Giant Panda MODERN SPECIES 10 ENSAMEG00000013167 ENSAMEG00000024544 FOXP4 (ENSAMEG00000013127) #7 MDFI (ENSAMEG00000026981) #8 TFEB (ENSAMEG00000013103) #9 PGC (ENSAMEG00000013081) #10 FRS3 (ENSAMEG00000013077) #11 PRICKLE4 (ENSAMEG00000013074) #12 TOMM6 (ENSAMEG00000013073) #13 USP49 (ENSAMEG00000013061) #14 MED20 (ENSAMEG00000013047) #15 BYSL (ENSAMEG00000013033) #16 CCND3 (ENSAMEG00000013018) #17 TAF8 (ENSAMEG00000012998) #18 C6orf132 (ENSAMEG00000026542) #19 GUCA1ANB (ENSAMEG00000030399) #22 GUCA1B (ENSAMEG00000012942) #23 MRPS10 (ENSAMEG00000012932) #24 TRERF1 (ENSAMEG00000023645) #25 UBR2 (ENSAMEG00000012828) #27 PRPH2 (ENSAMEG00000012814) #28 TBCC (ENSAMEG00000019324) #29 BICRAL (ENSAMEG00000012807) #30 RPL7L1 (ENSAMEG00000012791) #31 PTCRA (ENSAMEG00000027109) #33 CNPY3 (ENSAMEG00000012772) #34 GNMT (ENSAMEG00000012753) #35 ENSAMEG00000012714 #36 PPP2R5D (ENSAMEG00000012663) #37 MEA1 (ENSAMEG00000012655) KLHDC3 (ENSAMEG00000012631) Mustelinae ANCESTRAL SPECIES 8 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 American mink MODERN SPECIES 50 ENSNVIG00000013243 ENSNVIG00000013230 FOXP4 (ENSNVIG00000012871) #7 MDFI (ENSNVIG00000012832) #8 TFEB (ENSNVIG00000012765) #9 PGC (ENSNVIG00000012741) #10 FRS3 (ENSNVIG00000012724) #11 PRICKLE4 (ENSNVIG00000012701) #12 TOM6 (ENSNVIG00000012692) #13 USP49 (ENSNVIG00000012647) #14 MED20 (ENSNVIG00000012638) #15 BYST (ENSNVIG00000012629) #16 CCND3 (ENSNVIG00000012598) #17 TAF8 (ENSNVIG00000012563) #18 C6orf132 (ENSNVIG00000012546) #19 GUCA1ANB (ENSNVIG00000012541) #22 GUCA1A (ENSNVIG00000012518) #21 GUCA1B (ENSNVIG00000012511) #23 MRPS10 (ENSNVIG00000012504) #24 TRERF1 (ENSNVIG00000012462) #25 UBR2 (ENSNVIG00000012316) #27 PRPH2 (ENSNVIG00000012308) #28 TBCC (ENSNVIG00000012305) #29 K0240 (ENSNVIG00000012249) #30 RPL7L1 (ENSNVIG00000012232) #31 ENSNVIG00000012223 ENSNVIG00000012211 #33 CNPY3 (ENSNVIG00000012190) #34 ENSNVIG00000012179 #35 PEX6 (ENSNVIG00000012146) #36 PPP2R5D (ENSNVIG00000012005) #37 Canidae ANCESTRAL SPECIES 6 ENSGT00940000153835.a.a ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700.v #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l.a #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Red fox MODERN SPECIES 7 TREML2 (ENSVVUG00000026654) TREM1 (ENSVVUG00000026657) ENSVVUG00000026658 FOXP4 (ENSVVUG00000026661) #7 MDFI (ENSVVUG00000026662) #8 TFEB (ENSVVUG00000026665) #9 FRS3 (ENSVVUG00000026666) #11 ENSVVUG00000026668 #12 TOMM6 (ENSVVUG00000026670) #13 USP49 (ENSVVUG00000026671) #14 MED20 (ENSVVUG00000026676) #15 BYSL (ENSVVUG00000026680) #16 CCND3 (ENSVVUG00000026685) #17 TAF8 (ENSVVUG00000026691) #18 C6orf132 (ENSVVUG00000026693) #19 GUCA1ANB (ENSVVUG00000026696) #22 GUCA1A (ENSVVUG00000026699) #21 GUCA1B (ENSVVUG00000026700) #23 MRPS10 (ENSVVUG00000026701) #24 TRERF1 (ENSVVUG00000026706) #25 ENSVVUG00000026735 UBR2 (ENSVVUG00000026828) #27 PRPH2 (ENSVVUG00000027511) #28 TBCC (ENSVVUG00000027515) #29 BICRAL (ENSVVUG00000027518) #30 ENSVVUG00000027534 #31 PTCRA (ENSVVUG00000027538) #33 CNPY3 (ENSVVUG00000027539) #34 ENSVVUG00000027541 #35 GNMT (ENSVVUG00000027542) #35 PEX6 (ENSVVUG00000027551) #36 Canis_lupus ANCESTRAL SPECIES 11 ENSGT00940000153835.a.a ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700.v #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045.p #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l.a #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Dog MODERN SPECIES 3 TREML2 (ENSCAFG00845015271) TREM1 (ENSCAFG00845015313) ENSCAFG00845015357 FOXP4 (ENSCAFG00845015420) #7 MDFI (ENSCAFG00845015516) #8 TFEB (ENSCAFG00845015601) #9 FRS3 (ENSCAFG00845015678) #11 PRICKLE4 (ENSCAFG00845015733) #12 TOMM6 (ENSCAFG00845015815) #13 USP49 (ENSCAFG00845015856) #14 MED20 (ENSCAFG00845015923) #15 BYSL (ENSCAFG00845015977) #16 CCND3 (ENSCAFG00845016058) #17 TAF8 (ENSCAFG00845016250) #18 C6orf132 (ENSCAFG00845016343) #19 GUCA1ANB (ENSCAFG00845005438) #22 GUCA1A (ENSCAFG00845005448) #21 GUCA1B (ENSCAFG00845005466) #23 TRERF1 (ENSCAFG00845005596) #25 UBR2 (ENSCAFG00845005887) #27 PRPH2 (ENSCAFG00845006562) #28 TBCC (ENSCAFG00845006611) #29 BICRAL (ENSCAFG00845006656) #30 RPL7L1 (ENSCAFG00845006742) #31 ENSCAFG00845006833 #33 CNPY3 (ENSCAFG00845006859) #34 GNMT (ENSCAFG00845006923) #35 PEX6 (ENSCAFG00845006987) #36 PPP2R5D (ENSCAFG00845007060) #37 MEA1 (ENSCAFG00845007145) KLHDC3 (ENSCAFG00845007294) Dingo MODERN SPECIES 276 ENSCAFG00020008339 TREML2 (ENSCAFG00020008359) TREM1 (ENSCAFG00020008363) ENSCAFG00020008370 #7 MDFI (ENSCAFG00020008376) #8 TFEB (ENSCAFG00020008386) #9 FRS3 (ENSCAFG00020008399) #11 PRICKLE4 (ENSCAFG00020008411) #12 TOMM6 (ENSCAFG00020008414) #13 USP49 (ENSCAFG00020008418) #14 MED20 (ENSCAFG00020008424) #15 BYSL (ENSCAFG00020008426) #16 CCND3 (ENSCAFG00020008430) #17 TAF8 (ENSCAFG00020008435) #18 C6orf132 (ENSCAFG00020008459) #19 GUCA1ANB (ENSCAFG00020008462) #22 GUCA1A (ENSCAFG00020008468) #21 GUCA1B (ENSCAFG00020008471) #23 ENSCAFG00020008480 #24 TRERF1 (ENSCAFG00020008499) #25 UBR2 (ENSCAFG00020008679) #27 PRPH2 (ENSCAFG00020010555) #28 TBCC (ENSCAFG00020010562) #29 BICRAL (ENSCAFG00020010567) #30 RPL7L1 (ENSCAFG00020010586) #31 PTCRA (ENSCAFG00020010601) #33 CNPY3 (ENSCAFG00020010604) #34 GNMT (ENSCAFG00020010607) #35 PEX6 (ENSCAFG00020010623) #36 PPP2R5D (ENSCAFG00020010678) #37 MEA1 (ENSCAFG00020011037) Felidae ANCESTRAL SPECIES 5 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927.m Panthera ANCESTRAL SPECIES 7 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l.c #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927.m Tiger MODERN SPECIES 220 TREML2 (ENSPTIG00000018540) TREM1 (ENSPTIG00000017514) NCR2 (ENSPTIG00000016573) FOXP4 (ENSPTIG00000009478) #7 MDFI (ENSPTIG00000007258) #8 TFEB (ENSPTIG00000018959) #9 PGC (ENSPTIG00000017140) #10 FRS3 (ENSPTIG00000016828) #11 PRICKLE4 (ENSPTIG00000013733) #12 TOMM6 (ENSPTIG00000013327) #13 USP49 (ENSPTIG00000011351) #14 MED20 (ENSPTIG00000010826) #15 BYSL (ENSPTIG00000010244) #16 CCND3 (ENSPTIG00000007566) #17 TAF8 (ENSPTIG00000001301) #18 GUCA1ANB (ENSPTIG00000020348) #22 GUCA1A (ENSPTIG00000019090) #21 GUCA1B (ENSPTIG00000018931) #23 MRPS10 (ENSPTIG00000018454) #24 TRERF1 (ENSPTIG00000014632) #25 UBR2 (ENSPTIG00000009663) #27 PRPH2 (ENSPTIG00000008614) #28 TBCC (ENSPTIG00000000245) #29 BICRAL (ENSPTIG00000007798) #30 RPL7L1 (ENSPTIG00000005509) #31 PTCRA (ENSPTIG00000021904) #33 CNPY3 (ENSPTIG00000021789) #34 GNMT (ENSPTIG00000021496) #35 PEX6 (ENSPTIG00000020580) #36 PPP2R5D (ENSPTIG00000014329) #37 MEA1 (ENSPTIG00000013379) Panthera_a ANCESTRAL SPECIES 4 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l.c #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927.m leopard MODERN SPECIES 30 ENSPPRG00000003273 FOXP4 (ENSPPRG00000002467) #7 MDFI (ENSPPRG00000022722) #8 TFEB (ENSPPRG00000023683) #9 PGC (ENSPPRG00000015974) #10 FRS3 (ENSPPRG00000013960) #11 TOMM6 (ENSPPRG00000013563) #13 PRICKLE4 (ENSPPRG00000011657) #12 ENSPPRG00000011172 USP49 (ENSPPRG00000011049) #14 MED20 (ENSPPRG00000010645) #15 BYSL (ENSPPRG00000010500) #16 CCND3 (ENSPPRG00000010131) #17 TAF8 (ENSPPRG00000009335) #18 C6orf132 (ENSPPRG00000008556) #19 GUCA1ANB (ENSPPRG00000007957) #22 GUCA1A (ENSPPRG00000007667) #21 GUCA1B (ENSPPRG00000006615) #23 MRPS10 (ENSPPRG00000006267) #24 TRERF1 (ENSPPRG00000006118) #25 UBR2 (ENSPPRG00000003420) #27 PRPH2 (ENSPPRG00000001023) #28 TBCC (ENSPPRG00000015620) #29 BICRAL (ENSPPRG00000000850) #30 ENSPPRG00000000595 #31 PTCRA (ENSPPRG00000023115) #33 CNPY3 (ENSPPRG00000023529) #34 GNMT (ENSPPRG00000023762) #35 PEX6 (ENSPPRG00000024681) #36 PPP2R5D (ENSPPRG00000024805) #37 ENSPPRG00000017337 Cat MODERN SPECIES 236 NCR2 (ENSFCAG00000011518) ENSFCAG00000049466 FOXP4 (ENSFCAG00000011519) #7 MDFI (ENSFCAG00000011520) #8 TFEB (ENSFCAG00000011521) #9 PGC (ENSFCAG00000014737) #10 FRS3 (ENSFCAG00000014739) #11 PRICKLE4 (ENSFCAG00000023605) #12 TOMM6 (ENSFCAG00000038846) #13 USP49 (ENSFCAG00000022369) #14 MED20 (ENSFCAG00000027790) #15 BYSL (ENSFCAG00000026154) #16 CCND3 (ENSFCAG00000036644) #17 TAF8 (ENSFCAG00000041845) #18 CB2H6orf132 (ENSFCAG00000046589) #19 GUCA1ANB (ENSFCAG00000018880) #22 GUCA1A (ENSFCAG00000013623) #21 GUCA1B (ENSFCAG00000042031) #23 MRPS10 (ENSFCAG00000040557) #24 TRERF1 (ENSFCAG00000011210) #25 UBR2 (ENSFCAG00000004141) #27 PRPH2 (ENSFCAG00000004144) #28 TBCC (ENSFCAG00000004145) #29 BICRAL (ENSFCAG00000029362) #30 RPL7L1 (ENSFCAG00000009707) #31 PTCRA (ENSFCAG00000009709) #33 CNPY3 (ENSFCAG00000009710) #34 GNMT (ENSFCAG00000009711) #35 PEX6 (ENSFCAG00000009712) #36 PPP2R5D (ENSFCAG00000009713) #37 ENSFCAG00000031337 Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT01100000264839 ENSGT00940000164010 #20 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Equus ANCESTRAL SPECIES 10 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 Donkey MODERN SPECIES 28 ENSEASG00005027980 ENSEASG00005003011 FOXP4 (ENSEASG00005003018) #7 MDFI (ENSEASG00005003031) #8 TFEB (ENSEASG00005003034) #9 ENSEASG00005003040 FRS3 (ENSEASG00005003044) #11 PRICKLE4 (ENSEASG00005003047) #12 ENSEASG00005038459 #13 USP49 (ENSEASG00005037948) #14 MED20 (ENSEASG00005003058) #15 BYSL (ENSEASG00005003059) #16 CCND3 (ENSEASG00005003061) #17 TAF8 (ENSEASG00005003063) #18 C6orf132 (ENSEASG00005036376) #19 GUCA1ANB (ENSEASG00005032539) #22 GUCA1A (ENSEASG00005024726) #21 GUCA1B (ENSEASG00005003070) #23 MRPS10 (ENSEASG00005003071) #24 TRERF1 (ENSEASG00005003074) #25 UBR2 (ENSEASG00005003079) #27 PRPH2 (ENSEASG00005003091) #28 TBCC (ENSEASG00005029087) #29 BICRAL (ENSEASG00005003101) #30 RPL7L1 (ENSEASG00005003108) #31 ENSEASG00005037308 #33 CNPY3 (ENSEASG00005003119) #34 GNMT (ENSEASG00005003124) #35 PEX6 (ENSEASG00005003130) #36 PPP2R5D (ENSEASG00005003140) #37 MEA1 (ENSEASG00005034765) Horse MODERN SPECIES 12 ENSECAG00000035119 NCR2 (ENSECAG00000018907) ENSECAG00000030508 FOXP4 (ENSECAG00000000572) #7 MDFI (ENSECAG00000014590) #8 TFEB (ENSECAG00000019762) #9 ENSECAG00000015065 FRS3 (ENSECAG00000015081) #11 USP49 (ENSECAG00000018640) #14 PRICKLE4 (ENSECAG00000017961) #12 MED20 (ENSECAG00000020149) #15 BYSL (ENSECAG00000021260) #16 CCND3 (ENSECAG00000023862) #17 TAF8 (ENSECAG00000024276) #18 C6orf132 (ENSECAG00000034930) #19 ENSECAG00000002139 #22 GUCA1A (ENSECAG00000009745) #21 GUCA1B (ENSECAG00000038639) #23 MRPS10 (ENSECAG00000015274) #24 TRERF1 (ENSECAG00000016971) #25 UBR2 (ENSECAG00000020598) #27 ENSECAG00000058844 ENSECAG00000056989 ENSECAG00000050598 PRPH2 (ENSECAG00000017128) #28 TBCC (ENSECAG00000053303) #29 BICRAL (ENSECAG00000020500) #30 RPL7L1 (ENSECAG00000003113) #31 ENSECAG00000010795 #33 CNPY3 (ENSECAG00000042811) #34 GNMT (ENSECAG00000017768) #35 Chiroptera ANCESTRAL SPECIES 3 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT01100000264839 ENSGT00940000164010 #20 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.k.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Microchiroptera ANCESTRAL SPECIES 4 ENSGT00940000153835.a.a ENSGT01030000234811 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.d #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b.l #31 ENSGT00950000182878.b.b.k.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00530000063615.a ENSGT00390000006845 #35 Greater horseshoe bat MODERN SPECIES 21 ENSRFEG00010001833 ENSRFEG00010001867 FOXP4 (ENSRFEG00010001882) #7 MDFI (ENSRFEG00010001923) #8 TFEB (ENSRFEG00010001952) #9 PGC (ENSRFEG00010002003) #10 FRS3 (ENSRFEG00010002055) #11 PRICKLE4 (ENSRFEG00010002092) #12 TOMM6 (ENSRFEG00010002125) #13 USP49 (ENSRFEG00010002146) #14 MED20 (ENSRFEG00010002176) #15 BYSL (ENSRFEG00010002195) #16 CCND3 (ENSRFEG00010002230) #17 TAF8 (ENSRFEG00010002286) #18 C6orf132 (ENSRFEG00010002339) #19 GUCA1ANB (ENSRFEG00010002357) #22 GUCA1A (ENSRFEG00010002370) #21 GUCA1B (ENSRFEG00010002396) #23 MRPS10 (ENSRFEG00010002427) #24 TRERF1 (ENSRFEG00010002466) #25 UBR2 (ENSRFEG00010002543) #27 PRPH2 (ENSRFEG00010002622) #28 TBCC (ENSRFEG00010002655) #29 BICRAL (ENSRFEG00010002673) #30 ENSRFEG00010002700 #31 ENSRFEG00010002719 ENSRFEG00010002736 #33 CNPY3 (ENSRFEG00010002746) #34 ENSRFEG00010002775 GNMT (ENSRFEG00010002785) #35 PEX6 (ENSRFEG00010002811) #36 Megabat MODERN SPECIES 6511 FOXP4 (ENSPVAG00000007573) #7 MDFI (ENSPVAG00000007579) #8 TFEB (ENSPVAG00000007581) #9 PGC (ENSPVAG00000007586) #10 FRS3 (ENSPVAG00000007592) #11 PRICKLE4 (ENSPVAG00000007594) #12 TOMM6 (ENSPVAG00000007598) #13 USP49 (ENSPVAG00000007599) #14 MED20 (ENSPVAG00000007601) #15 BYSL (ENSPVAG00000007606) #16 CCND3 (ENSPVAG00000007610) #17 TAF8 (ENSPVAG00000007614) #18 ENSPVAG00000007617 ENSPVAG00000007619 #20 GUCA1ANB (ENSPVAG00000007620) #22 GUCA1A (ENSPVAG00000007621) #21 MRPS10 (ENSPVAG00000007624) #24 TRERF1 (ENSPVAG00000007626) #25 Atlantogenata ANCESTRAL SPECIES 3 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Afrotheria ANCESTRAL SPECIES 24 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000164010 #20 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Afrotheria_a ANCESTRAL SPECIES 23 ENSGT00470000042299 ENSGT00940000153835.a.b.c.a.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000164010 #20 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Elephant MODERN SPECIES 1 ENSLAFG00000032071 ENSLAFG00000002636 FOXP4 (ENSLAFG00000022762) #7 MDFI (ENSLAFG00000031523) #8 TFEB (ENSLAFG00000003059) #9 PGC (ENSLAFG00000017145) #10 FRS3 (ENSLAFG00000017154) #11 PRICKLE4 (ENSLAFG00000017160) #12 TOMM6 (ENSLAFG00000020886) #13 USP49 (ENSLAFG00000017166) #14 MED20 (ENSLAFG00000008885) #15 BYSL (ENSLAFG00000015418) #16 CCND3 (ENSLAFG00000023148) #17 TAF8 (ENSLAFG00000010601) #18 ENSLAFG00000000942 GUCA1ANB (ENSLAFG00000020783) #22 GUCA1A (ENSLAFG00000008087) #21 GUCA1B (ENSLAFG00000000468) #23 MRPS10 (ENSLAFG00000007822) #24 TRERF1 (ENSLAFG00000007825) #25 UBR2 (ENSLAFG00000014978) #27 PRPH2 (ENSLAFG00000015002) #28 TBCC (ENSLAFG00000006994) #29 BICRAL (ENSLAFG00000013839) #30 RPL7L1 (ENSLAFG00000013854) #31 ENSLAFG00000021529 PTCRA (ENSLAFG00000008710) #33 CNPY3 (ENSLAFG00000013858) #34 GNMT (ENSLAFG00000013861) #35 PEX6 (ENSLAFG00000013864) #36 PPP2R5D (ENSLAFG00000013874) #37 Hyrax MODERN SPECIES 9127 TAF8 (ENSPCAG00000014570) #18 ENSPCAG00000014611 #20 GUCA1ANB (ENSPCAG00000014638) #22 Xenarthra ANCESTRAL SPECIES 2 ENSGT00940000153835.a.b.c.a.b ENSGT00680000101580 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376 #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00940000157530.a #23 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00940000167232 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Armadillo MODERN SPECIES 1977 ENSDNOG00000049043 FOXP4 (ENSDNOG00000048023) #7 MDFI (ENSDNOG00000009771) #8 TFEB (ENSDNOG00000042176) #9 PGC (ENSDNOG00000033789) #10 FRS3 (ENSDNOG00000015972) #11 PRICKLE4 (ENSDNOG00000015976) #12 TOMM6 (ENSDNOG00000025602) #13 USP49 (ENSDNOG00000045633) #14 ENSDNOG00000046911 ENSDNOG00000016666 #15 BYSL (ENSDNOG00000016670) #16 CCND3 (ENSDNOG00000032518) #17 TAF8 (ENSDNOG00000002853) #18 C6orf132 (ENSDNOG00000043925) #19 ENSDNOG00000049672 #22 GUCA1A (ENSDNOG00000034168) #21 GUCA1B (ENSDNOG00000014835) #23 ENSDNOG00000046262 #24 Marsupialia ANCESTRAL SPECIES 2 ENSGT00470000042299 ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000164965 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.s.a #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 ENSGT00390000016927 ENSGT00940000157952 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00940000153835.a.b.b ENSGT00940000158700 #7 ENSGT00940000160187 #8 ENSGT00940000159691 #9 ENSGT00940000160626 #10 ENSGT00940000164965 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.s.a #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 ENSGT00390000009045 #24 ENSGT00940000160303.b #25 ENSGT00950000183075.a.a.a.a #27 ENSGT00940000157303 #28 ENSGT00940000162058 #29 ENSGT00940000159766 #30 ENSGT00950000182878.b.b #31 ENSGT01020000231049 ENSGT01030000235681 ENSGT00390000007712 #33 ENSGT00390000014072.A #34 ENSGT00390000006845 #35 ENSGT00550000074953 #36 ENSGT01030000234620.a.a.a.b #37 Diprotodontia ANCESTRAL SPECIES 105 ENSGT00940000164965 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.s.a #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 Diprotodontia_a ANCESTRAL SPECIES 97 ENSGT00940000164965 ENSGT00940000159495 #11 ENSGT00940000161789 #12 ENSGT00390000002376.s.a #13 ENSGT00940000157997 #14 ENSGT00390000002060 #15 ENSGT00390000007241 #16 ENSGT00940000160743 #17 ENSGT00390000017567 #18 ENSGT00940000163431 #19 ENSGT00390000014226 #22 ENSGT00940000160607 #21 koala MODERN SPECIES 395 FRS3 (ENSPCIG00000025895) #11 ENSPCIG00000025894 #12 ENSPCIG00000025893 #13 USP49 (ENSPCIG00000025892) #14 MED20 (ENSPCIG00000025891) #15 BYSL (ENSPCIG00000025889) #16 CCND3 (ENSPCIG00000025888) #17 TAF8 (ENSPCIG00000025887) #18 ENSPCIG00000031965 #19 ENSPCIG00000032038 #22 GUCA1A (ENSPCIG00000025884) #21 ENSPCIG00000034190 ENSPCIG00000025879 Common wonbat MODERN SPECIES 1061 ENSVURG00010008545 FRS3 (ENSVURG00010008531) #11 ENSVURG00010008525 ENSVURG00010008515 #12 ENSVURG00010008501 #13 USP49 (ENSVURG00010008495) #14 MED20 (ENSVURG00010008477) #15 BYSL (ENSVURG00010008463) #16 CCND3 (ENSVURG00010008408) #17 TAF8 (ENSVURG00010008375) #18 C6orf132 (ENSVURG00010008348) #19 ENSVURG00010008343 #22 ENSVURG00010008062 ENSVURG00010008057 ENSVURG00010006756 ENSVURG00010006691 ENSVURG00010006671 MRPS10 (ENSVURG00010006649) #24 TRERF1 (ENSVURG00010006588) #25 UBR2 (ENSVURG00010006540) #27 PRPH2 (ENSVURG00010006530) #28 TBCC (ENSVURG00010006523) #29 BICRAL (ENSVURG00010006494) #30 RPL7L1 (ENSVURG00010006479) #31 ENSVURG00010006468 ENSVURG00010006455 CNPY3 (ENSVURG00010006443) #34 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000004054 FOXP4 (ENSSHAG00000021467) #7 MDFI (ENSSHAG00000008515) #8 TFEB (ENSSHAG00000009705) #9 PGC (ENSSHAG00000010293) #10 ENSSHAG00000010582 FRS3 (ENSSHAG00000023844) #11 ENSSHAG00000010776 ENSSHAG00000025322 #12 MED20 (ENSSHAG00000010951) #15 USP49 (ENSSHAG00000021910) #14 BYSL (ENSSHAG00000003954) #16 ENSSHAG00000004385 #17 ENSSHAG00000024224 #18 C6orf132 (ENSSHAG00000004734) #19 ENSSHAG00000031266 #22 GUCA1A (ENSSHAG00000006248) #21 ENSSHAG00000002008 ENSSHAG00000007210 ENSSHAG00000030492 ENSSHAG00000004955 ENSSHAG00000029849 ENSSHAG00000031666 ENSSHAG00000029599 ENSSHAG00000001704 MRPS10 (ENSSHAG00000031320) #24 TRERF1 (ENSSHAG00000004599) #25 ENSSHAG00000030340 UBR2 (ENSSHAG00000009287) #27 PRPH2 (ENSSHAG00000001537) #28 TBCC (ENSSHAG00000028400) #29 Opossum MODERN SPECIES 1 FOXP4 (ENSMODG00000012934) #7 MDFI (ENSMODG00000047715) #8 ENSMODG00000012910 #10 ENSMODG00000023712 ENSMODG00000044033 USP49 (ENSMODG00000012836) #14 FRS3 (ENSMODG00000046484) #11 ENSMODG00000012839 #12 ENSMODG00000037162 #13 ENSMODG00000049178 MED20 (ENSMODG00000046391) #15 BYSL (ENSMODG00000012808) #16 CCND3 (ENSMODG00000012797) #17 ENSMODG00000012785 #18 ENSMODG00000040176 #19 ENSMODG00000047404 #22 GUCA1A (ENSMODG00000012758) #21 ENSMODG00000012706 ENSMODG00000012700 ENSMODG00000039816 ENSMODG00000051485 MRPS10 (ENSMODG00000019045) #24 TRERF1 (ENSMODG00000019042) #25 UBR2 (ENSMODG00000019037) #27 PRPH2 (ENSMODG00000019032) #28 TBCC (ENSMODG00000018987) #29 BICRAL (ENSMODG00000019030) #30 RPL7L1 (ENSMODG00000019028) #31 ENSMODG00000038338 #33 CNPY3 (ENSMODG00000019022) #34 GNMT (ENSMODG00000019018) #35