Sarcopterygii	ANCESTRAL SPECIES		ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00390000008749.f	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000163428.b.a	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000166052	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Tetrapoda	ANCESTRAL SPECIES	7	ENSGT00940000165642	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000163428.b.a	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Amniota	ANCESTRAL SPECIES	7	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000176107	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Mammalia	ANCESTRAL SPECIES	4	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000176107	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Theria	ANCESTRAL SPECIES		ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000176107	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Eutheria	ANCESTRAL SPECIES	1	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Primates	ANCESTRAL SPECIES	12	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602.a #35	ENSGT00390000000118.n #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Cebidae	ANCESTRAL SPECIES	9	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a.fb.a	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602.a #35	ENSGT00390000000118.n #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a.fb.a	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602.a #35	ENSGT00390000000118.n #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000153566.a.h	ENSGT00940000157167
Capuchin	MODERN SPECIES	45	BZW2 (ENSCCAG00000028749) #7	TSPAN13 (ENSCCAG00000020472) #8	AGR2 (ENSCCAG00000037867) #9	AGR3 (ENSCCAG00000035875) #10	AHR (ENSCCAG00000027846) #11	ENSCCAG00000013414 #12	SNX13 (ENSCCAG00000030831) #13	ENSCCAG00000027532 #14	HDAC9 (ENSCCAG00000020834) #15	ENSCCAG00000019905 #16	ENSCCAG00000020115 #17	POLR1F (ENSCCAG00000026416) #18	TMEM196 (ENSCCAG00000030192) #19	MACC1 (ENSCCAG00000013469) #20	ITGB8 (ENSCCAG00000037918) #21	ABCB5 (ENSCCAG00000031192) #22	SP8 (ENSCCAG00000030995) #23	ENSCCAG00000033872 #24	SP4 (ENSCCAG00000030472) #25	ENSCCAG00000035249 #26	DNAH11 (ENSCCAG00000035150) #27	ENSCCAG00000037585 #28	CDCA7L (ENSCCAG00000021172) #29	RAPGEF5 (ENSCCAG00000019957) #30	IL6 (ENSCCAG00000023712) #31	TOMM7 (ENSCCAG00000033041) #32	FAM126A (ENSCCAG00000027272) #33	ENSCCAG00000032424 #34	KLHL7 (ENSCCAG00000031111) #35	ENSCCAG00000023426 #36	NUP42 (ENSCCAG00000030624) #37
Bolivian squirrel monkey	MODERN SPECIES	112															ENSSBOG00000010479	ABCB5 (ENSSBOG00000033428) #22	ENSSBOG00000031119	ENSSBOG00000022288	SP4 (ENSSBOG00000026933) #25	ENSSBOG00000028226	ENSSBOG00000017440	DNAH11 (ENSSBOG00000025701) #27	CDCA7L (ENSSBOG00000019253) #29	RAPGEF5 (ENSSBOG00000031232) #30	IL6 (ENSSBOG00000023961) #31	ENSSBOG00000003308	HYCC1 (ENSSBOG00000033769) #33	ENSSBOG00000028644	KLHL7 (ENSSBOG00000030300) #35	NUP42 (ENSSBOG00000030576) #37	GPNMB (ENSSBOG00000021795)
Marmoset	MODERN SPECIES	20	AHR (ENSCJAG00000001029) #11	ENSCJAG00000080286 #12	ENSCJAG00000072238	SNX13 (ENSCJAG00000001040) #13	PRPS1L1 (ENSCJAG00000084763)	ENSCJAG00000078064	ENSCJAG00000084748	ENSCJAG00000055908	HDAC9 (ENSCJAG00000001076) #15	TWIST1 (ENSCJAG00000048476)	FERD3L (ENSCJAG00000038997)	POLR1F (ENSCJAG00000001148) #18	TMEM196 (ENSCJAG00000001161) #19	MACC1 (ENSCJAG00000001164) #20	ITGB8 (ENSCJAG00000001171) #21	ABCB5 (ENSCJAG00000001194) #22	SP8 (ENSCJAG00000001245) #23	SP4 (ENSCJAG00000001282) #25	DNAH11 (ENSCJAG00000001301) #27	CDCA7L (ENSCJAG00000001351) #29	RAPGEF5 (ENSCJAG00000036784) #30	IL6 (ENSCJAG00000001400) #31	ENSCJAG00000047185 #32	ENSCJAG00000077464	HYCC1 (ENSCJAG00000001415) #33	ENSCJAG00000072766	KLHL7 (ENSCJAG00000001422) #35	NUP42 (ENSCJAG00000001466) ##37	ENSCJAG00000086172	ENSCJAG00000073027	GPNMB (ENSCJAG00000001480)
Mas night monkey	MODERN SPECIES	442																ABCB5 (ENSANAG00000027201) #22	SP8 (ENSANAG00000030928) #23	ENSANAG00000022807	SP4 (ENSANAG00000023463) #25	DNAH11 (ENSANAG00000034687) #27	CDCA7L (ENSANAG00000030953) #29	RAPGEF5 (ENSANAG00000026030) #30	IL6 (ENSANAG00000020982) #31	TOMM7 (ENSANAG00000035181) #32	HYCC1 (ENSANAG00000028454) #33	ENSANAG00000030287 #36	KLHL7 (ENSANAG00000023416) #35	ENSANAG00000029090 ##37	GPNMB (ENSANAG00000037499)	MALSU1 (ENSANAG00000038181)	IGF2BP3 (ENSANAG00000022059)
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00940000163505.a.b	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00910000148420	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00940000163505.a.b	ENSGT00950000183188.B	ENSGT00390000015035
Hominidae	ANCESTRAL SPECIES	11	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00390000004690.a.b.h	ENSGT00390000012691.c.a.b	ENSGT00390000004524.c.a.a.b.b	ENSGT00940000157827 #25	ENSGT00910000148420	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	25	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00440000039046.b	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000155142.i.a.b	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00390000004690.a.b.h	ENSGT00390000012691.c.a.b	ENSGT00390000004524.c.a.a.b.b	ENSGT00940000157827 #25	ENSGT00910000148420	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000008042.A.a.b.d	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000002517.b	ENSGT00390000014833 #32	ENSGT00390000011295.b #33
Homo/Pan group	ANCESTRAL SPECIES	24	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00440000039046.b	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000155142.i.a.b	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00390000004690.a.b.h	ENSGT00390000012691.c.a.b	ENSGT00940000157827 #25	ENSGT00910000148420	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000008042.A.a.b.d	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000002517.b	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35
Pan	ANCESTRAL SPECIES	25	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00440000039046.b	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000155142.i.a.b	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00390000004690.a.b.h	ENSGT00390000012691.c.a.b	ENSGT00940000157827 #25	ENSGT00910000148420	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000008042.A.a.b.d	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000002517.b	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35
Bonobo	MODERN SPECIES	20	BZW2 (ENSPPAG00000029762) #7	TSPAN13 (ENSPPAG00000013639) #8	AGR2 (ENSPPAG00000037458) #9	AGR3 (ENSPPAG00000031582) #10	ENSPPAG00000038575	AHR (ENSPPAG00000030245) #11	SNX13 (ENSPPAG00000028500) #13	HDAC9 (ENSPPAG00000043202) #15	ENSPPAG00000041192	FERD3L (ENSPPAG00000010360)	POLR1F (ENSPPAG00000034623) #18	TMEM196 (ENSPPAG00000028334) #19	MACC1 (ENSPPAG00000030497) #20	ITGB8 (ENSPPAG00000043938) #21	ENSPPAG00000028502	ABCB5 (ENSPPAG00000039922) #22	ENSPPAG00000036145 #23	ENSPPAG00000029131	ENSPPAG00000030781	SP4 (ENSPPAG00000035736) #25	ENSPPAG00000029065	DNAH11 (ENSPPAG00000043198) #27	CDCA7L (ENSPPAG00000037358) #29	ENSPPAG00000041457	ENSPPAG00000041225 #30	ENSPPAG00000034348	ENSPPAG00000035732 #31	ENSPPAG00000022918	ENSPPAG00000041170	ENSPPAG00000041778 #32	HYCC1 (ENSPPAG00000034349) #33
Chimpanzee	MODERN SPECIES	20	ANKMY2 (ENSPTRG00000018950)	BZW2 (ENSPTRG00000018951) #7	TSPAN13 (ENSPTRG00000018952) #8	AGR2 (ENSPTRG00000018953) #9	AGR3 (ENSPTRG00000018954) #10	ENSPTRG00000050595	AHR (ENSPTRG00000018955) #11	SNX13 (ENSPTRG00000018957) #13	HDAC9 (ENSPTRG00000018959) #15	TWIST1 (ENSPTRG00000018960)	FERD3L (ENSPTRG00000018961)	POLR1F (ENSPTRG00000018962) #18	TMEM196 (ENSPTRG00000018963) #19	MACC1 (ENSPTRG00000018964) #20	ITGB8 (ENSPTRG00000018965) #21	ABCB5 (ENSPTRG00000018966) #22	SP8 (ENSPTRG00000018968) #23	ENSPTRG00000051657	SP4 (ENSPTRG00000018970) #25	DNAH11 (ENSPTRG00000049017) #27	CDCA7L (ENSPTRG00000018975) #29	ENSPTRG00000050953	RAPGEF5 (ENSPTRG00000018976) #30	ENSPTRG00000052284 ##17	ENSPTRG00000051768	IL6 (ENSPTRG00000018979) #31	ENSPTRG00000047418	ENSPTRG00000052763	TOMM7 (ENSPTRG00000018980) #32	HYCC1 (ENSPTRG00000018981) #33	KLHL7 (ENSPTRG00000018982) #35
Human	MODERN SPECIES	19	BZW2 (ENSG00000136261) #7	TSPAN13 (ENSG00000106537) #8	AGR2 (ENSG00000106541) #9	AGR3 (ENSG00000173467) #10	AHR (ENSG00000106546) #11	ENSG00000283321	SNX13 (ENSG00000071189) #13	PRPS1L1 (ENSG00000229937)	HDAC9 (ENSG00000048052) #15	TWIST1 (ENSG00000122691)	FERD3L (ENSG00000146618)	POLR1F (ENSG00000105849) #18	TMEM196 (ENSG00000173452) #19	MACC1 (ENSG00000183742) #20	ITGB8 (ENSG00000105855) #21	ABCB5 (ENSG00000004846) #22	SP8 (ENSG00000164651) #23	SP4 (ENSG00000105866) #25	DNAH11 (ENSG00000105877) #27	CDCA7L (ENSG00000164649) #29	RAPGEF5 (ENSG00000136237) #30	STEAP1B (ENSG00000105889)	IL6 (ENSG00000136244) #31	TOMM7 (ENSG00000196683) #32	HYCC1 (ENSG00000122591) #33	KLHL7 (ENSG00000122550) #35	NUP42 (ENSG00000136243) #37	GPNMB (ENSG00000136235)	MALSU1 (ENSG00000156928)	IGF2BP3 (ENSG00000136231)	TRA2A (ENSG00000164548)
Gorilla	MODERN SPECIES	20	BZW2 (ENSGGOG00000022223) #7	TSPAN13 (ENSGGOG00000011165) #8	AGR2 (ENSGGOG00000012859) #9	AGR3 (ENSGGOG00000003470) #10	ENSGGOG00000038771	AHR (ENSGGOG00000011367) #11	SNX13 (ENSGGOG00000010291) #13	PRPS1L1 (ENSGGOG00000025809)	HDAC9 (ENSGGOG00000013656) #15	FERD3L (ENSGGOG00000021943)	TWISTNB (ENSGGOG00000026888) #18	TMEM196 (ENSGGOG00000005711) #19	MACC1 (ENSGGOG00000005884) #20	ITGB8 (ENSGGOG00000002471) #21	ENSGGOG00000039456	ABCB5 (ENSGGOG00000008618) #22	ENSGGOG00000001311	ENSGGOG00000025589	ENSGGOG00000025012	SP4 (ENSGGOG00000001332) #25	DNAH11 (ENSGGOG00000004748) #27	CDCA7L (ENSGGOG00000004782) #29	RAPGEF5 (ENSGGOG00000017128) #30	ENSGGOG00000001859	IL6 (ENSGGOG00000005335) #31	ENSGGOG00000036649	ENSGGOG00000028092	ENSGGOG00000025021 #32	HYCC1 (ENSGGOG00000040579) #33	KLHL7 (ENSGGOG00000005779) #35	NUP42 (ENSGGOG00000001038) #37
Orangutan	MODERN SPECIES	20	LRRC72 (ENSPPYG00000035210)	ANKMY2 (ENSPPYG00000017764)	BZW2 (ENSPPYG00000017763) #7	TSPAN13 (ENSPPYG00000017762) #8	AGR2 (ENSPPYG00000017761) #9	AGR3 (ENSPPYG00000017760) #10	AHR (ENSPPYG00000017758) #11	SNX13 (ENSPPYG00000017757) #13	HDAC9 (ENSPPYG00000017755) #15	TWIST1 (ENSPPYG00000017754)	FERD3L (ENSPPYG00000017753)	POLR1F (ENSPPYG00000032278) #18	TMEM196 (ENSPPYG00000017751) #19	MACC1 (ENSPPYG00000017750) #20	ITGB8 (ENSPPYG00000017749) #21	ABCB5 (ENSPPYG00000017748) #22	SP8 (ENSPPYG00000039855) #23	ENSPPYG00000039103	SP4 (ENSPPYG00000017746) #25	DNAH11 (ENSPPYG00000017745) #27	CDCA7L (ENSPPYG00000017744) #29	RAPGEF5 (ENSPPYG00000017742) #30	ENSPPYG00000017741	IL6 (ENSPPYG00000017740) #31	ENSPPYG00000017739 #32	HYCC1 (ENSPPYG00000017738) #33	KLHL7 (ENSPPYG00000017736) #35	ENSPPYG00000029950	NUP42 (ENSPPYG00000031100) #37	GPNMB (ENSPPYG00000017732)	MALSU1 (ENSPPYG00000017731)
Gibbon	MODERN SPECIES	1	ENSNLEG00000033414	ANKMY2 (ENSNLEG00000016394)	BZW2 (ENSNLEG00000016417) #7	TSPAN13 (ENSNLEG00000016510) #8	AGR2 (ENSNLEG00000016530) #9	AGR3 (ENSNLEG00000016546) #10	AHR (ENSNLEG00000016550) #11	SNX13 (ENSNLEG00000016555) #13	HDAC9 (ENSNLEG00000016612) #15	ENSNLEG00000019263	FERD3L (ENSNLEG00000019265)	POLR1F (ENSNLEG00000035755) #18	TMEM196 (ENSNLEG00000016677) #19	MACC1 (ENSNLEG00000016683) #20	ITGB8 (ENSNLEG00000016686) #21	ABCB5 (ENSNLEG00000016694) #22	SP8 (ENSNLEG00000016729) #23	ENSNLEG00000032986	ENSNLEG00000032580	ENSNLEG00000026698 ##26	SP4 (ENSNLEG00000016733) #25	ENSNLEG00000029437	DNAH11 (ENSNLEG00000016739) #27	CDCA7L (ENSNLEG00000016758) #29	RAPGEF5 (ENSNLEG00000016769) #30	ENSNLEG00000016777 #31	ENSNLEG00000032170 #32	HYCC1 (ENSNLEG00000016785) #33	ENSNLEG00000016798	ENSNLEG00000016801	ACTN4 (ENSNLEG00000016804)
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00940000162047.h	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00940000163505.a.b	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00940000162047.h	ENSGT00390000013151.a.b #20	ENSGT00390000017606.a.a.i.a.b.a.a.c.b	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00940000163505.a.b	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00940000162047.h	ENSGT00390000013151.a.b #20	ENSGT00390000017606.a.a.i.a.b.a.a.c.b	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00940000163505.a.b.a.a	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Macaca	ANCESTRAL SPECIES	3	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000006548.b.j.a.d	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00940000163505.a.b.a.a	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000006548.b.j.a.d	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00940000163505.a.b.a.a	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Rhesus	MODERN SPECIES	13	TSPAN13 (ENSMMUG00000017049) #8	AGR2 (ENSMMUG00000017050) #9	AGR3 (ENSMMUG00000016017) #10	ENSMMUG00000051849	ENSMMUG00000031775	AHR (ENSMMUG00000012203) #11	ENSMMUG00000062260	SNX13 (ENSMMUG00000021915) #13	PRPS1L1 (ENSMMUG00000009748)	ENSMMUG00000053098	HDAC9 (ENSMMUG00000011170) #15	POLR1F (ENSMMUG00000009609) #18	TMEM196 (ENSMMUG00000009610) #19	MACC1 (ENSMMUG00000022683) #20	ITGB8 (ENSMMUG00000006898) #21	ABCB5 (ENSMMUG00000007821) #22	SP8 (ENSMMUG00000003722) #23	SP4 (ENSMMUG00000021684) #25	CDCA7L (ENSMMUG00000022766) #29	RAPGEF5 (ENSMMUG00000002987) #30	ENSMMUG00000056674	IL6 (ENSMMUG00000019983) #31	TOMM7 (ENSMMUG00000065311) #32	HYCC1 (ENSMMUG00000000517) #33	KLHL7 (ENSMMUG00000001562) #35	NUP42 (ENSMMUG00000001560) #37	ENSMMUG00000064876	GPNMB (ENSMMUG00000012648)	MALSU1 (ENSMMUG00000061041)	IGF2BP3 (ENSMMUG00000004839)	ENSMMUG00000056703 ##26
Crab-eating macaque	MODERN SPECIES	13	SNX13 (ENSMFAG00000039975) #13	PRPS1L1 (ENSMFAG00000039072)	HDAC9 (ENSMFAG00000008589) #15	ENSMFAG00000051581	TWIST1 (ENSMFAG00000045982)	FERD3L (ENSMFAG00000019773)	ENSMFAG00000029127	POLR1F (ENSMFAG00000045328) #18	TMEM196 (ENSMFAG00000049094) #19	MACC1 (ENSMFAG00000031393) #20	ITGB8 (ENSMFAG00000000217) #21	ENSMFAG00000034604	ENSMFAG00000065699	ENSMFAG00000062991	ENSMFAG00000054030	ABCB5 (ENSMFAG00000020450) #22	SP8 (ENSMFAG00000055927) #23	SP4 (ENSMFAG00000002740) #25	DNAH11 (ENSMFAG00000044423) #27	CDCA7L (ENSMFAG00000001391) #29	RAPGEF5 (ENSMFAG00000002425) #30	ENSMFAG00000051658	ENSMFAG00000054566	IL6 (ENSMFAG00000000229) #31	ENSMFAG00000035836 #32	HYCC1 (ENSMFAG00000027679) #33	KLHL7 (ENSMFAG00000038387) #35	ENSMFAG00000054666	NUP42 (ENSMFAG00000002902) #37	GPNMB (ENSMFAG00000037301)	MALSU1 (ENSMFAG00000043713)
Pig-tailed macaque	MODERN SPECIES	534	ANKMY2 (ENSMNEG00000029729)	BZW2 (ENSMNEG00000002080) #7	TSPAN13 (ENSMNEG00000035525) #8	AGR2 (ENSMNEG00000040536) #9	AGR3 (ENSMNEG00000030796) #10	AHR (ENSMNEG00000037051) #11	SNX13 (ENSMNEG00000040568) #13	HDAC9 (ENSMNEG00000043567) #15	ENSMNEG00000003361 #16	FERD3L (ENSMNEG00000000812)	ENSMNEG00000029122	POLR1F (ENSMNEG00000041159) #18	TMEM196 (ENSMNEG00000028154) #19	MACC1 (ENSMNEG00000040192) #20	ITGB8 (ENSMNEG00000037384) #21	ABCB5 (ENSMNEG00000043301) #22	SP8 (ENSMNEG00000028781) #23	ENSMNEG00000030054	SP4 (ENSMNEG00000038124) #25	DNAH11 (ENSMNEG00000037208) #27	CDCA7L (ENSMNEG00000038917) #29	RAPGEF5 (ENSMNEG00000032992) #30	IL6 (ENSMNEG00000003406) #31	ENSMNEG00000036770 #32	HYCC1 (ENSMNEG00000024817) #33	KLHL7 (ENSMNEG00000036449) #35	NUP42 (ENSMNEG00000006026) #37	GPNMB (ENSMNEG00000036790)	MALSU1 (ENSMNEG00000035724)	IGF2BP3 (ENSMNEG00000029494)	TRA2A (ENSMNEG00000040670)
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00940000162047.h	ENSGT00390000013151.a.b #20	ENSGT00390000017606.a.a.i.a.b.a.a.c.b	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000007456	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000153095.g.b.a.b.n.a ##26
Olive baboon	MODERN SPECIES	14	AGR3 (ENSPANG00000013000) #10	AHR (ENSPANG00000002444) #11	SNX13 (ENSPANG00000004971) #13	PRPS1L1 (ENSPANG00000015919)	ENSPANG00000045769	ENSPANG00000022056 #15	ENSPANG00000038169 #15	TWIST1 (ENSPANG00000041053)	FERD3L (ENSPANG00000010936)	ENSPANG00000029384	POLR1F (ENSPANG00000015736) #18	TMEM196 (ENSPANG00000045812) #19	MACC1 (ENSPANG00000006404) #20	ITGB8 (ENSPANG00000006887) #21	ENSPANG00000050246	ABCB5 (ENSPANG00000011492) #22	ENSPANG00000046908	SP8 (ENSPANG00000023061) #23	SP4 (ENSPANG00000006251) #25	DNAH11 (ENSPANG00000021596) #27	CDCA7L (ENSPANG00000012840) #29	RAPGEF5 (ENSPANG00000000701) #30	ENSPANG00000046282	IL6 (ENSPANG00000000700) #31	ENSPANG00000008241 #32	HYCC1 (ENSPANG00000022515) #33	KLHL7 (ENSPANG00000025374) #35	NUP42 (ENSPANG00000005682) #37	ENSPANG00000011493	GPNMB (ENSPANG00000023383)	MALSU1 (ENSPANG00000016790)
Cercopithecinae_d	ANCESTRAL SPECIES	10	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00940000162047.h	ENSGT00390000013151.a.b #20	ENSGT00390000017606.a.a.i.a.b.a.a.c.b	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00390000004524.c.a.a.b.b	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000153095.g.b.a.b.n.a ##26
Drill	MODERN SPECIES	420				AHR (ENSMLEG00000029744) #11	SNX13 (ENSMLEG00000041046) #13	HDAC9 (ENSMLEG00000035193) #15	ENSMLEG00000008070 #16	TWIST1 (ENSMLEG00000036035)	FERD3L (ENSMLEG00000018020)	ENSMLEG00000034959	POLR1F (ENSMLEG00000042783) #18	TMEM196 (ENSMLEG00000044198) #19	ENSMLEG00000033513	MACC1 (ENSMLEG00000044226) #20	ITGB8 (ENSMLEG00000037210) #21	ABCB5 (ENSMLEG00000034697) #22	ENSMLEG00000041341	ENSMLEG00000035908	SP4 (ENSMLEG00000042211) #25	DNAH11 (ENSMLEG00000021317) #27	CDCA7L (ENSMLEG00000044429) #29	RAPGEF5 (ENSMLEG00000042037) #30	IL6 (ENSMLEG00000034011) #31	ENSMLEG00000026554 #32	HYCC1 (ENSMLEG00000029209) #33	KLHL7 (ENSMLEG00000034863) #35	NUP42 (ENSMLEG00000036917) #37	GPNMB (ENSMLEG00000042619)	MALSU1 (ENSMLEG00000041736)	IGF2BP3 (ENSMLEG00000003021)	TRA2A (ENSMLEG00000032154)
Sooty mangabey	MODERN SPECIES	147	BZW2 (ENSCATG00000040929) #7	TSPAN13 (ENSCATG00000035412) #8	AGR2 (ENSCATG00000037807) #9	AGR3 (ENSCATG00000035431) #10	AHR (ENSCATG00000044976) #11	SNX13 (ENSCATG00000042039) #13	HDAC9 (ENSCATG00000037558) #15	ENSCATG00000018918 #16	FERD3L (ENSCATG00000018900)	POLR1F (ENSCATG00000035621) #18	TMEM196 (ENSCATG00000038942) #19	ENSCATG00000035531	MACC1 (ENSCATG00000030512) #20	ENSCATG00000015015	ITGB8 (ENSCATG00000040735) #21	ABCB5 (ENSCATG00000044646) #22	SP8 (ENSCATG00000036724) #23	ENSCATG00000008206	SP4 (ENSCATG00000017624) #25	DNAH11 (ENSCATG00000022060) #27	CDCA7L (ENSCATG00000032002) #29
Vervet Monkey	MODERN SPECIES	13	AGR3 (ENSCSAG00000013496) #10	AHR (ENSCSAG00000013508) #11	SNX13 (ENSCSAG00000013523) #13	PRPS1L1 (ENSCSAG00000019611)	ENSCSAG00000013537 #15	ENSCSAG00000013539 #15	ENSCSAG00000013542 #15	TWIST1 (ENSCSAG00000019610)	FERD3L (ENSCSAG00000019609)	POLR1F (ENSCSAG00000013544) #18	ENSCSAG00000013547	ENSCSAG00000013550	MACC1 (ENSCSAG00000013560) #20	ENSCSAG00000019608	ITGB8 (ENSCSAG00000013574) #21	ABCB5 (ENSCSAG00000013593) #22	SP8 (ENSCSAG00000013600) #23	SP4 (ENSCSAG00000013609) #25	DNAH11 (ENSCSAG00000013803) #27	CDCA7L (ENSCSAG00000013887) #29	RAPGEF5 (ENSCSAG00000013898) #30	IL6 (ENSCSAG00000013925) #31	TOMM7 (ENSCSAG00000013939) #32	HYCC1 (ENSCSAG00000013945) #33	KLHL7 (ENSCSAG00000013950) #35	NUP42 (ENSCSAG00000013956) #37	GPNMB (ENSCSAG00000013965)	MALSU1 (ENSCSAG00000013969)	IGF2BP3 (ENSCSAG00000014023)	TRA2A (ENSCSAG00000014051)	CCDC126 (ENSCSAG00000014057)
Rhinopithecus	ANCESTRAL SPECIES	263						ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00940000162047.h	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00390000004524.c.a.a.b.b	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000002062.h	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33
Black snub-nosed monkey	MODERN SPECIES	378													ENSRBIG00000024429	MACC1 (ENSRBIG00000033021) #20	ITGB8 (ENSRBIG00000040861) #21	ABCB5 (ENSRBIG00000042594) #22	SP8 (ENSRBIG00000028482) #23	ENSRBIG00000034971	ENSRBIG00000003508	SP4 (ENSRBIG00000039879) #25	DNAH11 (ENSRBIG00000034224) #27	CDCA7L (ENSRBIG00000000806) #29	RAPGEF5 (ENSRBIG00000020324) #30	ENSRBIG00000029815	ENSRBIG00000022043	IL6 (ENSRBIG00000044039) #31	ENSRBIG00000043074 #32	HYCC1 (ENSRBIG00000041875) #33
Golden snub-nosed monkey	MODERN SPECIES	1298																ABCB5 (ENSRROG00000013171) #22	SP8 (ENSRROG00000034182) #23	ENSRROG00000044156	ENSRROG00000028729	SP4 (ENSRROG00000032783) #25	DNAH11 (ENSRROG00000005514) #27
Tarsier	MODERN SPECIES	6203													MACC1 (ENSTSYG00000009061) #20	ITGB8 (ENSTSYG00000005437) #21	ENSTSYG00000030857	ENSTSYG00000035852 #22
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT01030000235027
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT01030000235027
Mouse lemur	MODERN SPECIES	2	ENSMICG00000036491	ANKMY2 (ENSMICG00000009932)	BZW2 (ENSMICG00000015293) #7	TSPAN13 (ENSMICG00000015312) #8	AGR2 (ENSMICG00000015349) #9	AGR3 (ENSMICG00000013575) #10	AHR (ENSMICG00000011723) #11	ENSMICG00000045138	SNX13 (ENSMICG00000014067) #13	HDAC9 (ENSMICG00000000850) #15	ENSMICG00000033981	POLR1F (ENSMICG00000036489) #18	TMEM196 (ENSMICG00000028950) #19	MACC1 (ENSMICG00000027329) #20	ITGB8 (ENSMICG00000009239) #21	ABCB5 (ENSMICG00000013242) #22	SP8 (ENSMICG00000037978) #23	SP4 (ENSMICG00000034088) #25	DNAH11 (ENSMICG00000008480) #27	CDCA7L (ENSMICG00000008539) #29	RAPGEF5 (ENSMICG00000006685) #30	ENSMICG00000006701 #31	TOMM7 (ENSMICG00000006709) #32	HYCC1 (ENSMICG00000006711) #33	KLHL7 (ENSMICG00000013635) #35	NUP42 (ENSMICG00000046211) #37	GPNMB (ENSMICG00000013667)	MALSU1 (ENSMICG00000033474)	IGF2BP3 (ENSMICG00000013683)	NPSR1 (ENSMICG00000008331)	ENSMICG00000048019
Lemuriformes_a	ANCESTRAL SPECIES	109	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833.l #32	ENSGT00390000014833.k #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Coquerels sifaka	MODERN SPECIES	770	LRRC72 (ENSPCOG00000025114)	ANKMY2 (ENSPCOG00000017740)	BZW2 (ENSPCOG00000014275) #7	TSPAN13 (ENSPCOG00000000668) #8	AGR2 (ENSPCOG00000020586) #9	AHR (ENSPCOG00000027017) #11	SNX13 (ENSPCOG00000025896) #13	ENSPCOG00000007173	HDAC9 (ENSPCOG00000022707) #15	POLR1F (ENSPCOG00000017601) #18	TMEM196 (ENSPCOG00000018528) #19	ENSPCOG00000004583	ENSPCOG00000013796	MACC1 (ENSPCOG00000015984) #20	ITGB8 (ENSPCOG00000020325) #21	ABCB5 (ENSPCOG00000019076) #22	SP8 (ENSPCOG00000010150) #23	SP4 (ENSPCOG00000014034) #25	DNAH11 (ENSPCOG00000015545) #27	ENSPCOG00000006256	CDCA7L (ENSPCOG00000006365) #29	RAPGEF5 (ENSPCOG00000024208) #30	ENSPCOG00000015406 #31	TOMM7 (ENSPCOG00000025812) #32	HYCC1 (ENSPCOG00000027753) #33	KLHL7 (ENSPCOG00000019482) #35	ENSPCOG00000026578 #37	GPNMB (ENSPCOG00000018874)	MALSU1 (ENSPCOG00000023462)	ENSPCOG00000010110
Greater bamboo lemur	MODERN SPECIES	182															ITGB8 (ENSPSMG00000024041) #21	ABCB5 (ENSPSMG00000024023) #22	SP8 (ENSPSMG00000023997) #23	ENSPSMG00000023993	SP4 (ENSPSMG00000023985) #25	DNAH11 (ENSPSMG00000023962) #27	CDCA7L (ENSPSMG00000023885) #29	RAPGEF5 (ENSPSMG00000023848) #30	ENSPSMG00000023802	ENSPSMG00000023799 #31	ENSPSMG00000023794 #32
Bushbaby	MODERN SPECIES	143								AHR (ENSOGAG00000012656) #11	SNX13 (ENSOGAG00000001781) #13	HDAC9 (ENSOGAG00000007864) #15	FERD3L (ENSOGAG00000014773)	POLR1F (ENSOGAG00000009189) #18	TMEM196 (ENSOGAG00000009193) #19	MACC1 (ENSOGAG00000006910) #20	ITGB8 (ENSOGAG00000003839) #21	ABCB5 (ENSOGAG00000009068) #22	ENSOGAG00000025614	ENSOGAG00000026884	SP4 (ENSOGAG00000007284) #25	DNAH11 (ENSOGAG00000009835) #27	CDCA7L (ENSOGAG00000009860) #29	RAPGEF5 (ENSOGAG00000013911) #30	ENSOGAG00000004177 #31	ENSOGAG00000029286	HYCC1 (ENSOGAG00000002456) #33	KLHL7 (ENSOGAG00000017098) #35	NUP42 (ENSOGAG00000017153) #37	GPNMB (ENSOGAG00000017155)	MALSU1 (ENSOGAG00000017157)	IGF2BP3 (ENSOGAG00000017159)	TRA2A (ENSOGAG00000009733)
Euarchontoglires_A	ANCESTRAL SPECIES	23	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Glires	ANCESTRAL SPECIES	24	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Rodentia	ANCESTRAL SPECIES	12	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT00940000164009	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Naked mole-rat female	MODERN SPECIES	5	BZW2 (ENSHGLG00000011038) #7	AGR2 (ENSHGLG00000042591) #9	TSPAN13 (ENSHGLG00000010631) #8	AHR (ENSHGLG00000006373) #11	ENSHGLG00000035349	SNX13 (ENSHGLG00000018267) #13	PRPS1L1 (ENSHGLG00000021217)	HDAC9 (ENSHGLG00000019023) #15	ENSHGLG00000033404	FERD3L (ENSHGLG00000036051)	POLR1F (ENSHGLG00000010976) #18	TMEM196 (ENSHGLG00000035074) #19	ENSHGLG00000040956	MACC1 (ENSHGLG00000005625) #20	ITGB8 (ENSHGLG00000009109) #21	ENSHGLG00000007430 #22	SP8 (ENSHGLG00000041939) #23	SP4 (ENSHGLG00000014842) #25	DNAH11 (ENSHGLG00000014062) #27	ENSHGLG00000043520	CDCA7L (ENSHGLG00000005237) #29	RAPGEF5 (ENSHGLG00000013551) #30	ENSHGLG00000020692	ENSHGLG00000020842	ENSHGLG00000007816 #31	TOMM7 (ENSHGLG00000006840) #32	ENSHGLG00000045090	ENSHGLG00000016355 #33	ENSHGLG00000016313	ENSHGLG00000016251	ENSHGLG00000033596
Hystricomorpha_a	ANCESTRAL SPECIES	41	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00940000166044	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT01030000235027	ENSGT00940000153470.a.a.a.b
Guinea pig	MODERN SPECIES	31	ENSCPOG00000000910	SOSTDC1 (ENSCPOG00000034288)	ENSCPOG00000011510	ANKMY2 (ENSCPOG00000011512)	BZW2 (ENSCPOG00000011515) #7	TSPAN13 (ENSCPOG00000034690) #8	AGR2 (ENSCPOG00000000018) #9	AHR (ENSCPOG00000005481) #11	SNX13 (ENSCPOG00000009570) #13	PRPS1L1 (ENSCPOG00000008036)	HDAC9 (ENSCPOG00000005468) #15	POLR1F (ENSCPOG00000031651) #18	TMEM196 (ENSCPOG00000013556) #19	MACC1 (ENSCPOG00000003007) #20	ITGB8 (ENSCPOG00000009110) #21	ABCB5 (ENSCPOG00000002896) #22	SP8 (ENSCPOG00000026910) #23	ENSCPOG00000007612	SP4 (ENSCPOG00000015154) #25	DNAH11 (ENSCPOG00000003632) #27	CDCA7L (ENSCPOG00000003655) #29	RAPGEF5 (ENSCPOG00000003046) #30
Hystricomorpha_b	ANCESTRAL SPECIES	39	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000166044	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b	ENSGT00770000120611.B
Long-tailed chinchilla	MODERN SPECIES	117	CRPPA (ENSCLAG00000008000)	SOSTDC1 (ENSCLAG00000009096)	ENSCLAG00000010495	ANKMY2 (ENSCLAG00000010313)	BZW2 (ENSCLAG00000011809) #7	TSPAN13 (ENSCLAG00000012606) #8	AGR2 (ENSCLAG00000005464) #9	AHR (ENSCLAG00000005612) #11	SNX13 (ENSCLAG00000005253) #13	HDAC9 (ENSCLAG00000007911) #15	FERD3L (ENSCLAG00000017792)	POLR1F (ENSCLAG00000012696) #18	TMEM196 (ENSCLAG00000013947) #19	MACC1 (ENSCLAG00000005944) #20	ITGB8 (ENSCLAG00000006980) #21	ABCB5 (ENSCLAG00000012805) #22	SP8 (ENSCLAG00000013238) #23	SP4 (ENSCLAG00000013285) #25	DNAH11 (ENSCLAG00000007590) #27	CDCA7L (ENSCLAG00000007779) #29	RAPGEF5 (ENSCLAG00000009347) #30	ENSCLAG00000009385	TOMM7 (ENSCLAG00000009880) #32	HYCC1 (ENSCLAG00000008734) #33	KLHL7 (ENSCLAG00000007077) #35	NUP42 (ENSCLAG00000007547) #37	GPNMB (ENSCLAG00000004706)	MALSU1 (ENSCLAG00000008469)	IGF2BP3 (ENSCLAG00000009835)	TRA2A (ENSCLAG00000007917)	CCDC126 (ENSCLAG00000006880)
Degu	MODERN SPECIES	56	ENSODEG00000007541 #8	AGR2 (ENSODEG00000006586) #9	ENSODEG00000008143	AHR (ENSODEG00000006823) #11	ENSODEG00000019583	SNX13 (ENSODEG00000007084) #13	ENSODEG00000007366	PRPS1L1 (ENSODEG00000019429)	ENSODEG00000007765	TWIST1 (ENSODEG00000008450)	FERD3L (ENSODEG00000019445)	POLR1F (ENSODEG00000007222) #18	ENSODEG00000006740	MACC1 (ENSODEG00000006372) #20	ITGB8 (ENSODEG00000006123) #21	ABCB5 (ENSODEG00000009297) #22	SP8 (ENSODEG00000007393) #23	SP4 (ENSODEG00000007953) #25	DNAH11 (ENSODEG00000010213) #27	CDCA7L (ENSODEG00000006644) #29	RAPGEF5 (ENSODEG00000007375) #30	HYCC1 (ENSODEG00000008398) #33	KLHL7 (ENSODEG00000007276) #35	GPNMB (ENSODEG00000007447)	MALSU1 (ENSODEG00000008210)	ENSODEG00000011195	TRA2A (ENSODEG00000008335)	ENSODEG00000009301	CCDC126 (ENSODEG00000009592)	ENSODEG00000009815	ENSODEG00000008091
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167.n
Marmotini	ANCESTRAL SPECIES	84	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30
Marmotini_b	ANCESTRAL SPECIES	125	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30
Arctic ground squirrel	MODERN SPECIES	13	ANKMY2 (ENSUPAG00010012270)	BZW2 (ENSUPAG00010012281) #7	TSPAN13 (ENSUPAG00010012320) #8	AGR2 (ENSUPAG00010012328) #9	AGR3 (ENSUPAG00010012339) #10	AHR (ENSUPAG00010012350) #11	SNX13 (ENSUPAG00010012364) #13	PRPS1L1 (ENSUPAG00010012410)	HDAC9 (ENSUPAG00010012420) #15	TWIST1 (ENSUPAG00010012792)	FERD3L (ENSUPAG00010012798)	POLR1F (ENSUPAG00010012802) #18	ENSUPAG00010012807	MACC1 (ENSUPAG00010012815) #20	ITGB8 (ENSUPAG00010012852) #21	ABCB5 (ENSUPAG00010012875) #22	SP8 (ENSUPAG00010012923) #23	SP4 (ENSUPAG00010012934) #25	DNAH11 (ENSUPAG00010012960) #27	CDCA7L (ENSUPAG00010013062) #29	RAPGEF5 (ENSUPAG00010013100) #30
Squirrel	MODERN SPECIES	146	BZW2 (ENSSTOG00000002506) #7	TSPAN13 (ENSSTOG00000008833) #8	AGR2 (ENSSTOG00000008843) #9	AGR3 (ENSSTOG00000028440) #10	AHR (ENSSTOG00000003086) #11	SNX13 (ENSSTOG00000001983) #13	HDAC9 (ENSSTOG00000001518) #15	TWIST1 (ENSSTOG00000032264)	FERD3L (ENSSTOG00000025739)	POLR1F (ENSSTOG00000022702) #18	TMEM196 (ENSSTOG00000027635) #19	ENSSTOG00000032072	ENSSTOG00000031600	MACC1 (ENSSTOG00000015506) #20	ITGB8 (ENSSTOG00000016396) #21	ABCB5 (ENSSTOG00000027737) #22	SP8 (ENSSTOG00000028058) #23	SP4 (ENSSTOG00000010326) #25	DNAH11 (ENSSTOG00000010333) #27	CDCA7L (ENSSTOG00000010398) #29	RAPGEF5 (ENSSTOG00000026745) #30
Alpin marmot	MODERN SPECIES	51	ANKMY2 (ENSMMMG00000015031)	BZW2 (ENSMMMG00000015053) #7	TSPAN13 (ENSMMMG00000015067) #8	AGR2 (ENSMMMG00000015076) #9	AGR3 (ENSMMMG00000015096) #10	AHR (ENSMMMG00000015102) #11	SNX13 (ENSMMMG00000015118) #13	PRPS1L1 (ENSMMMG00000015155)	HDAC9 (ENSMMMG00000015175) #15	TWIST1 (ENSMMMG00000015432)	FERD3L (ENSMMMG00000015442)	POLR1F (ENSMMMG00000015448) #18	ENSMMMG00000015455	MACC1 (ENSMMMG00000015478) #20	ITGB8 (ENSMMMG00000015498) #21	ENSMMMG00000015513 #22	SP8 (ENSMMMG00000015521) #23	SP4 (ENSMMMG00000015532) #25	DNAH11 (ENSMMMG00000015540) #27	CDCA7L (ENSMMMG00000015620) #29	RAPGEF5 (ENSMMMG00000015646) #30
Eurasian red squirrel	MODERN SPECIES	17	AHR (ENSSVLG00005011696) #11	ENSSVLG00005011843	ENSSVLG00005011888	ENSSVLG00005011929 #13	PRPS1L1 (ENSSVLG00005012063)	HDAC9 (ENSSVLG00005012221) #15	ENSSVLG00005013183	TWIST1 (ENSSVLG00005013248)	FERD3L (ENSSVLG00005013395)	ENSSVLG00005013439	POLR1F (ENSSVLG00005013559) #18	TMEM196 (ENSSVLG00005013673) #19	ENSSVLG00005013765	MACC1 (ENSSVLG00005013888) #20	ITGB8 (ENSSVLG00005013971) #21	ABCB5 (ENSSVLG00005014277) #22	SP8 (ENSSVLG00005014678) #23	SP4 (ENSSVLG00005014734) #25	DNAH11 (ENSSVLG00005015034) #27	ENSSVLG00005017283	CDCA7L (ENSSVLG00005017354) #29	RAPGEF5 (ENSSVLG00005017502) #30	ENSSVLG00005018453 #31	TOMM7 (ENSSVLG00005018533) #32	ENSSVLG00005018594	HYCC1 (ENSSVLG00005018797) #33	ENSSVLG00005018849	ENSSVLG00005018885 #35	NUP42 (ENSSVLG00005019028) #37	ENSSVLG00005019051	GPNMB (ENSSVLG00005019072)
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00940000164009	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.a.a.b ##11	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Muroidea	ANCESTRAL SPECIES	8	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.a.a.b ##11	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Muroidea_A	ANCESTRAL SPECIES	15													ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00940000154095.b.a	ENSGT00490000043432	ENSGT00940000156086	ENSGT00390000013743	ENSGT00940000158089	ENSGT00940000154411.`b.i.f.jc.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b	ENSGT01030000234536.b.b.b	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.a	ENSGT01050000244936.d.b
Cricetidae	ANCESTRAL SPECIES	17													ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00940000154095.b.a	ENSGT00490000043432	ENSGT00940000156086	ENSGT00390000013743	ENSGT00940000158089	ENSGT00940000154411.`b.i.f.jc.a	ENSGT01030000234536.b.b.b.m.b	ENSGT01050000244871.a.a.c.b.a.a.a.s	ENSGT01030000234536.b.b.a.e.b.b.f.a	ENSGT00940000162296
Cricetinae	ANCESTRAL SPECIES	62													ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00940000154095.b.a	ENSGT00490000043432	ENSGT00940000156086	ENSGT00390000013743	ENSGT00940000158089	ENSGT00940000154411.`b.i.f.jc.a
Chinese hamster chok1gshd	MODERN SPECIES	251													Tmem196 (ENSCGRG00001024227)	Macc1 (ENSCGRG00001006694) #20	Itgb8 (ENSCGRG00001010627) #21	Abcb5 (ENSCGRG00001017932) #22	Sp8 (ENSCGRG00001016188) #23	Sp4 (ENSCGRG00001021046) #25	Dnah11 (ENSCGRG00001020590) #27	Cdca7l (ENSCGRG00001014444) #29	Rapgef5 (ENSCGRG00001019381) #30	ENSCGRG00001022623	ENSCGRG00001008114	Ppp4r4 (ENSCGRG00001011779)	Serpina10 (ENSCGRG00001010214)	Serpina6 (ENSCGRG00001011122)	ENSCGRG00001013015	ENSCGRG00001016854	Serpina11 (ENSCGRG00001017752)	Serpina9 (ENSCGRG00001018417)	Serpina12 (ENSCGRG00001019801)
Golden Hamster	MODERN SPECIES	786												Tmem196 (ENSMAUG00000015322)	Macc1 (ENSMAUG00000014905) #20	Itgb8 (ENSMAUG00000000108) #21	ENSMAUG00000018272	Abcb5 (ENSMAUG00000013511) #22	Sp8 (ENSMAUG00000016898) #23	Sp4 (ENSMAUG00000016400) #25	Dnah11 (ENSMAUG00000010352) #27	Cdca7l (ENSMAUG00000010583) #29	ENSMAUG00000009615 #30	Ncapg2 (ENSMAUG00000009370)	Esyt2 (ENSMAUG00000009011)	Dync2i1 (ENSMAUG00000007405)	Vipr2 (ENSMAUG00000006692)	ENSMAUG00000006032
Cricetidae_B	ANCESTRAL SPECIES	18													ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00940000154095.b.a	ENSGT00490000043432	ENSGT00940000156086	ENSGT00390000013743	ENSGT00940000158089	ENSGT00940000153165.a.a.c.a	ENSGT00940000161491.d	ENSGT00940000166360	ENSGT00940000163307.e.b	ENSGT00940000163307.f
Northern American deer mouse	MODERN SPECIES	5											Tmem196 (ENSPEMG00000026386)	ENSPEMG00000024099	Macc1 (ENSPEMG00000021443) #20	Itgb8 (ENSPEMG00000021722) #21	ENSPEMG00000025194	Abcb5 (ENSPEMG00000022832) #22	Sp8 (ENSPEMG00000022432) #23	Sp4 (ENSPEMG00000021781) #25	Dnah11 (ENSPEMG00000022658) #27	Cdca7l (ENSPEMG00000014266) #29	Rapgef5 (ENSPEMG00000021786) #30	ENSPEMG00000025190 ##26	Ptprn2 (ENSPEMG00000021727)	Ncapg2 (ENSPEMG00000022912)	Esyt2 (ENSPEMG00000023634)	Dync2i1 (ENSPEMG00000023457)	Vipr2 (ENSPEMG00000023142)	Zfp386 (ENSPEMG00000024076)	ENSPEMG00000027209	ENSPEMG00000027922	ENSPEMG00000024806
Murinae	ANCESTRAL SPECIES	8													ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00940000154095.b.a	ENSGT00490000043432	ENSGT00940000156086	ENSGT00390000013743	ENSGT00940000158089	ENSGT00940000154411.`b.i.f.jc.a	ENSGT01030000234536.b.b.b.o.b	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.b	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b.b	ENSGT01030000234536.b.b.b.o.a
Mus	ANCESTRAL SPECIES	10													ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00940000154095.b.a	ENSGT00490000043432	ENSGT00940000156086	ENSGT00390000013743	ENSGT00940000158089	ENSGT00940000153165.a.a.c.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.b.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b.b	ENSGT01030000234536.b.b.b.o.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.a.a
Mus_A	ANCESTRAL SPECIES	17													ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00940000154095.b.a	ENSGT00490000043432	ENSGT00940000156086	ENSGT00390000013743	ENSGT00940000158089	ENSGT00940000154411.`b.i.f.jc.a	ENSGT01030000234536.b.b.b.o.b	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.b.b	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.a.b	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.a
Mus_B	ANCESTRAL SPECIES	17													ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00940000154095.b.a	ENSGT00490000043432	ENSGT00940000156086	ENSGT00390000013743	ENSGT00940000158089	ENSGT00940000153165.a.a.c.a.g	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b.b.d.b.a.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.a.b.a.b.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.a.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b.a.a
Mus_C	ANCESTRAL SPECIES	11													ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00940000154095.b.a	ENSGT00490000043432	ENSGT00940000156086	ENSGT00390000013743	ENSGT00940000158089	ENSGT00940000153165.a.a.c.a.g	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b.b.d.b.a.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.a.b.a.b.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.a.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b.a.a
Steppe mouse	MODERN SPECIES	3319														Macc1 (ENSMSIG00000017123) #20	Itgb8 (ENSMSIG00000017155) #21	Abcb5 (ENSMSIG00000017217) #22	Sp8 (ENSMSIG00000017284) #23	Sp4 (ENSMSIG00000017320) #25	Dnah11 (ENSMSIG00000017415) #27	Cdca7l (ENSMSIG00000017635) #29	Rapgef5 (ENSMSIG00000017670) #30	ENSMSIG00000017759	Ptprn2 (ENSMSIG00000017766)	Ncapg2 (ENSMSIG00000017853)	ENSMSIG00000017915	Esyt2 (ENSMSIG00000017925)	Ccdc126 (ENSMSIG00000018128)	Fam221a (ENSMSIG00000018134)	Stk31 (ENSMSIG00000018180)	ENSMSIG00000018408	ENSMSIG00000018422
spretus	MODERN SPECIES	3													Tmem196 (MGP_SPRETEiJ_G0019042)	Macc1 (MGP_SPRETEiJ_G0019041) #20	Itgb8 (MGP_SPRETEiJ_G0019040) #21	Abcb5 (MGP_SPRETEiJ_G0019039) #22	Sp8 (MGP_SPRETEiJ_G0019038) #23	Sp4 (MGP_SPRETEiJ_G0019037) #25	Dnah11 (MGP_SPRETEiJ_G0019036) #27	Cdca7l (MGP_SPRETEiJ_G0019035) #29	Rapgef5 (MGP_SPRETEiJ_G0019034) #30	Ptprn2 (MGP_SPRETEiJ_G0019033)	Ncapg2 (MGP_SPRETEiJ_G0019032)	Esyt2 (MGP_SPRETEiJ_G0019031)	Dync2i1 (MGP_SPRETEiJ_G0019030)	Vipr2 (MGP_SPRETEiJ_G0019029)	Zfp386 (MGP_SPRETEiJ_G0019028)	MGP_SPRETEiJ_G0000071	MGP_SPRETEiJ_G0019027	Ighv1-42 (MGP_SPRETEiJ_G0000070)	Ighv1-15 (MGP_SPRETEiJ_G0000068)
Mouse	MODERN SPECIES	3													Tmem196 (ENSMUSG00000048004)	Macc1 (ENSMUSG00000041886) #20	Itgb8 (ENSMUSG00000025321) #21	Abcb5 (ENSMUSG00000072791) #22	Sp8 (ENSMUSG00000048562) #23	Sp4 (ENSMUSG00000025323) #25	Dnah11 (ENSMUSG00000018581) #27	Cdca7l (ENSMUSG00000021175) #29	Rapgef5 (ENSMUSG00000041992) #30	Ptprn2 (ENSMUSG00000056553)	Ncapg2 (ENSMUSG00000042029)	Esyt2 (ENSMUSG00000021171)	Dync2i1 (ENSMUSG00000042050)	Vipr2 (ENSMUSG00000011171)	Zfp386 (ENSMUSG00000042063)	Ighv1-85 (ENSMUSG00000096150)	Ighv1-84 (ENSMUSG00000094940)	Ighv1-82 (ENSMUSG00000095127)	Ighv1-81 (ENSMUSG00000094689)
Ryukyu mouse	MODERN SPECIES	3													Tmem196 (MGP_CAROLIEiJ_G0018190)	Macc1 (MGP_CAROLIEiJ_G0018189) #20	Itgb8 (MGP_CAROLIEiJ_G0018188) #21	Abcb5 (MGP_CAROLIEiJ_G0018187) #22	Sp8 (MGP_CAROLIEiJ_G0018186) #23	Sp4 (MGP_CAROLIEiJ_G0018185) #25	Dnah11 (MGP_CAROLIEiJ_G0018184) #27	Cdca7l (MGP_CAROLIEiJ_G0018183) #29	Rapgef5 (MGP_CAROLIEiJ_G0018182) #30	Ptprn2 (MGP_CAROLIEiJ_G0018181)	Ncapg2 (MGP_CAROLIEiJ_G0018180)	Esyt2 (MGP_CAROLIEiJ_G0018179)	Dync2i1 (MGP_CAROLIEiJ_G0018178)	Vipr2 (MGP_CAROLIEiJ_G0018177)	Zfp386 (MGP_CAROLIEiJ_G0018176)	Ighv8-4 (MGP_CAROLIEiJ_G0000065)	Ighv1-47 (MGP_CAROLIEiJ_G0000064)	Ighv1-19 (MGP_CAROLIEiJ_G0000063)	MGP_CAROLIEiJ_G0000062
Shrew mouse	MODERN SPECIES	20													Tmem196 (MGP_PahariEiJ_G0029950)	Macc1 (MGP_PahariEiJ_G0029949) #20	Itgb8 (MGP_PahariEiJ_G0029948) #21	Abcb5 (MGP_PahariEiJ_G0029947) #22	Sp8 (MGP_PahariEiJ_G0029946) #23	Sp4 (MGP_PahariEiJ_G0029945) #25	Dnah11 (MGP_PahariEiJ_G0029944) #27	Cdca7l (MGP_PahariEiJ_G0029943) #29	Rapgef5 (MGP_PahariEiJ_G0029942) #30	Ptprn2 (MGP_PahariEiJ_G0029941)	Ncapg2 (MGP_PahariEiJ_G0029940)	Esyt2 (MGP_PahariEiJ_G0029939)	Dync2i1 (MGP_PahariEiJ_G0029938)	Vipr2 (MGP_PahariEiJ_G0029937)	Zfp386 (MGP_PahariEiJ_G0029936)	Ighv8-4 (MGP_PahariEiJ_G0000053)	Ighv1-47 (MGP_PahariEiJ_G0000052)	MGP_PahariEiJ_G0000051	MGP_PahariEiJ_G0000050
Rat	MODERN SPECIES	16												ENSRNOG00000071153	Tmem196 (ENSRNOG00000037435)	Macc1 (ENSRNOG00000037436) #20	Itgb8 (ENSRNOG00000006569) #21	Abcb5 (ENSRNOG00000006398) #22	Sp8 (ENSRNOG00000068174) #23	RGD1562420 (ENSRNOG00000005826)	Sp4 (ENSRNOG00000005472) #25	Dnah11 (ENSRNOG00000005451) #27	Cdca7l (ENSRNOG00000005410) #29	Rapgef5 (ENSRNOG00000005271) #30	Ptprn2 (ENSRNOG00000005003)	Ncapg2 (ENSRNOG00000004968)	Esyt2 (ENSRNOG00000032391)	Dync2i1 (ENSRNOG00000004520)	Vipr2 (ENSRNOG00000004317)	Zfp386 (ENSRNOG00000004268)	ENSRNOG00000064569	ENSRNOG00000065191	ENSRNOG00000063918
Lesser Egyptian jerboa	MODERN SPECIES	49	Bzw2 (ENSJJAG00000016668) #7	Tspan13 (ENSJJAG00000009446) #8	Agr2 (ENSJJAG00000008799) #9	Agr3 (ENSJJAG00000017440) #10	ENSJJAG00000008319 ##11	Snx13 (ENSJJAG00000023704) #13	ENSJJAG00000022475	ENSJJAG00000007778	ENSJJAG00000002041	Polr1f (ENSJJAG00000015887) #18	Tmem196 (ENSJJAG00000016048)	ENSJJAG00000018343	Macc1 (ENSJJAG00000011164) #20	ENSJJAG00000022523	Itgb8 (ENSJJAG00000010258) #21	Abcb5 (ENSJJAG00000012546) #22	ENSJJAG00000007215 #23	Sp4 (ENSJJAG00000005918) #25	Dnah11 (ENSJJAG00000016436) #27	Cdca7l (ENSJJAG00000019084) #29	Rapgef5 (ENSJJAG00000011120) #30	ENSJJAG00000012041 #31	Tomm7 (ENSJJAG00000015481) #32	Hycc1 (ENSJJAG00000010769) #33	Klhl7 (ENSJJAG00000020404) #35	Nupl2 (ENSJJAG00000016370) #37	Gpnmb (ENSJJAG00000016316)	ENSJJAG00000024157	Igf2bp3 (ENSJJAG00000011174)	ENSJJAG00000007586	Tra2a (ENSJJAG00000022787)
Kangaroo rat	MODERN SPECIES	391	Bzw2 (ENSDORG00000010878) #7	Tspan13 (ENSDORG00000030021) #8	Agr2 (ENSDORG00000007734) #9	Agr3 (ENSDORG00000007740) #10	ENSDORG00000029209	Ahr (ENSDORG00000007750) #11	Snx13 (ENSDORG00000005766) #13	ENSDORG00000023238	Ferd3l (ENSDORG00000012867)	Polr1f (ENSDORG00000007795) #18	Tmem196 (ENSDORG00000007796)	ENSDORG00000027869	ENSDORG00000029943	Macc1 (ENSDORG00000010765) #20	Itgb8 (ENSDORG00000000272) #21	Abcb5 (ENSDORG00000000201) #22	Sp8 (ENSDORG00000024994) #23	Sp4 (ENSDORG00000029615) #25	Dnah11 (ENSDORG00000005890) #27	Cdca7l (ENSDORG00000005901) #29	Rapgef5 (ENSDORG00000007969) #30	ENSDORG00000023585 #30
Lagomorpha	ANCESTRAL SPECIES	39									ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878.e #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00910000147494	ENSGT00940000153470.a.a.a.b	ENSGT00390000007287
Rabbit	MODERN SPECIES	1										SNX13 (ENSOCUG00000001142) #13	HDAC9 (ENSOCUG00000014444) #15	ENSOCUG00000015156 #18	TMEM196 (ENSOCUG00000015153) #19	MACC1 (ENSOCUG00000003618) #20	ITGB8 (ENSOCUG00000002197) #21	ABCB5 (ENSOCUG00000010857) #22	ENSOCUG00000036529	SP4 (ENSOCUG00000015345) #25	CDCA7L (ENSOCUG00000014023) #29	ENSOCUG00000023674	ENSOCUG00000030459	RAPGEF5 (ENSOCUG00000015115) #30	ENSOCUG00000027471 #31	ENSOCUG00000037710 #32	ENSOCUG00000029441	ENSOCUG00000036787	HYCC1 (ENSOCUG00000006565) #33	KLHL7 (ENSOCUG00000014780) #35	NUP42 (ENSOCUG00000014808) #37	GPNMB (ENSOCUG00000026334)	MALSU1 (ENSOCUG00000008972)
Pika	MODERN SPECIES	112																ENSOPRG00000014051 #22
Tree shrew	MODERN SPECIES	556																ENSTBEG00000005203 #22
Laurasiatheria	ANCESTRAL SPECIES	22	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Hedgehog	MODERN SPECIES	3222																ABCB5 (ENSEEUG00000007567) #22
Common shrew	MODERN SPECIES	10745																ABCB5 (ENSSARG00000007134) #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Carnivora	ANCESTRAL SPECIES	15	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Caniformia	ANCESTRAL SPECIES	11	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00910000147494
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00910000147494
Ursidae	ANCESTRAL SPECIES	12	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b.t #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT01020000230346.C.f	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B.f	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00910000147494
Ursus	ANCESTRAL SPECIES	31	ENSGT00390000016820	ENSGT00390000012561.a.k #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b.t #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT01020000230346.C.f	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00940000165902.c	ENSGT00950000183188.B.f	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Polar bear	MODERN SPECIES	133	BZW2 (ENSUMAG00000022044) #7	TSPAN13 (ENSUMAG00000022069) #8	AGR2 (ENSUMAG00000022071) #9	AHR (ENSUMAG00000022084) #11	SNX13 (ENSUMAG00000022159) #13	HDAC9 (ENSUMAG00000022181) #15	ENSUMAG00000022191	ENSUMAG00000022196	ENSUMAG00000022197 #16	ENSUMAG00000022199	FERD3L (ENSUMAG00000022200)	POLR1F (ENSUMAG00000022203) #18	ENSUMAG00000022206	MACC1 (ENSUMAG00000022210) #20	ITGB8 (ENSUMAG00000022227) #21	ABCB5 (ENSUMAG00000022237) #22	ENSUMAG00000022244	SP4 (ENSUMAG00000022248) #25	DNAH11 (ENSUMAG00000022264) #27	CDCA7L (ENSUMAG00000022358) #29	RAPGEF5 (ENSUMAG00000022363) #30	IL6 (ENSUMAG00000000079) #31	ENSUMAG00000000168 #32	HYCC1 (ENSUMAG00000000269) #33	KLHL7 (ENSUMAG00000000283) #35	NUP42 (ENSUMAG00000000302) #37	ENSUMAG00000000307	GPNMB (ENSUMAG00000000319)	MALSU1 (ENSUMAG00000000343)	IGF2BP3 (ENSUMAG00000000428)	TRA2A (ENSUMAG00000001181)
American black bear	MODERN SPECIES	2835																ENSUAMG00000011215 #22	SP8 (ENSUAMG00000011213) #23
Giant Panda	MODERN SPECIES		ANKMY2 (ENSAMEG00000010451)	ENSAMEG00000010473 #7	TSPAN13 (ENSAMEG00000010524) #8	AGR2 (ENSAMEG00000010541) #9	AHR (ENSAMEG00000010559) #11	SNX13 (ENSAMEG00000010639) #13	PRPS1L1 (ENSAMEG00000018989)	HDAC9 (ENSAMEG00000008517) #15	ENSAMEG00000024869	ENSAMEG00000029364 #16	FERD3L (ENSAMEG00000019030)	POLR1F (ENSAMEG00000008558) #18	TMEM196 (ENSAMEG00000029520) #19	MACC1 (ENSAMEG00000008564) #20	ITGB8 (ENSAMEG00000008573) #21	ABCB5 (ENSAMEG00000008608) #22	ENSAMEG00000031017	SP4 (ENSAMEG00000016154) #25	DNAH11 (ENSAMEG00000003851) #27	CDCA7L (ENSAMEG00000004021) #29	RAPGEF5 (ENSAMEG00000004037) #30	ENSAMEG00000030960 #32	IL6 (ENSAMEG00000003313) #31	HYCC1 (ENSAMEG00000003342) #33	KLHL7 (ENSAMEG00000003365) #35	NUP42 (ENSAMEG00000003404) #37	GPNMB (ENSAMEG00000003423)	IGF2BP3 (ENSAMEG00000003485)	MALSU1 (ENSAMEG00000003483)	TRA2A (ENSAMEG00000003501)	CCDC126 (ENSAMEG00000025403)
Mustelinae	ANCESTRAL SPECIES	9	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
American mink	MODERN SPECIES	24	BZW2 (ENSNVIG00000014944) #7	TSN13 (ENSNVIG00000014934) #8	AGR2 (ENSNVIG00000014918) #9	ENSNVIG00000014908	AHR (ENSNVIG00000014868) #11	SNX13 (ENSNVIG00000014729) #13	PRPS1L1 (ENSNVIG00000014716)	HDAC9 (ENSNVIG00000014244) #15	ENSNVIG00000014234 #16	TWIST1 (ENSNVIG00000014227)	FERD3L (ENSNVIG00000014221)	POLR1F (ENSNVIG00000014208) #18	TMEM196 (ENSNVIG00000014172) #19	MACC1 (ENSNVIG00000014137) #20	ITGB8 (ENSNVIG00000014094) #21	ABCB5 (ENSNVIG00000014039) #22	SP8 (ENSNVIG00000014018) #23	ENSNVIG00000014010	SP4 (ENSNVIG00000013987) #25	DNAH11 (ENSNVIG00000013532) #27	CDCA7L (ENSNVIG00000013461) #29	RAPGEF5 (ENSNVIG00000013339) #30	IL6 (ENSNVIG00000013327) #31	ENSNVIG00000013324	HYCC1 (ENSNVIG00000013205) #33	KLHL7 (ENSNVIG00000013165) #35	NUP42 (ENSNVIG00000013146) #37	GPNMB (ENSNVIG00000013107)	MALSU1 (ENSNVIG00000013104)	ENSNVIG00000013097	IGF2BP3 (ENSNVIG00000013056)
Ferret	MODERN SPECIES	171	BZW2 (ENSMPUG00000014004) #7	TSPAN13 (ENSMPUG00000013982) #8	AGR2 (ENSMPUG00000013980) #9	ENSMPUG00000013972	ENSMPUG00000013969	AHR (ENSMPUG00000013964) #11	ENSMPUG00000019299	SNX13 (ENSMPUG00000013958) #13	PRPS1L1 (ENSMPUG00000019297)	ENSMPUG00000013956	HDAC9 (ENSMPUG00000013952) #15	POLR1F (ENSMPUG00000013948) #18	TMEM196 (ENSMPUG00000013945) #19	MACC1 (ENSMPUG00000013939) #20	ITGB8 (ENSMPUG00000013932) #21	ABCB5 (ENSMPUG00000013926) #22	SP8 (ENSMPUG00000013919) #23	ENSMPUG00000013913	SP4 (ENSMPUG00000013911) #25	DNAH11 (ENSMPUG00000013607) #27	CDCA7L (ENSMPUG00000013603) #29	RAPGEF5 (ENSMPUG00000013597) #30	IL6 (ENSMPUG00000013592) #31	TOMM7 (ENSMPUG00000013589) #32	HYCC1 (ENSMPUG00000013583) #33	KLHL7 (ENSMPUG00000013580) #35	NUP42 (ENSMPUG00000013548) #37	GPNMB (ENSMPUG00000013540)	MALSU1 (ENSMPUG00000013534)	IGF2BP3 (ENSMPUG00000013527)	TRA2A (ENSMPUG00000013480)
Canidae	ANCESTRAL SPECIES	22	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00990000204321.a	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Canis_lupus	ANCESTRAL SPECIES	24	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00390000000076.i	ENSGT00990000204321.a	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Dog	MODERN SPECIES	5	BZW2 (ENSCAFG00845005705) #7	TSPAN13 (ENSCAFG00845005750) #8	AGR2 (ENSCAFG00845005787) #9	AHR (ENSCAFG00845005867) #11	ENSCAFG00845005897	SNX13 (ENSCAFG00845006012) #13	PRPS1L1 (ENSCAFG00845006516)	HDAC9 (ENSCAFG00845006703) #15	TWIST1 (ENSCAFG00845007076)	FERD3L (ENSCAFG00845007118)	POLR1F (ENSCAFG00845007146) #18	TMEM196 (ENSCAFG00845007184) #19	MACC1 (ENSCAFG00845007266) #20	ITGB8 (ENSCAFG00845007494) #21	ENSCAFG00845007578	ABCB5 (ENSCAFG00845007641) #22	SP8 (ENSCAFG00845007758) #23	SP4 (ENSCAFG00845007811) #25	DNAH11 (ENSCAFG00845007920) #27	CDCA7L (ENSCAFG00845008168) #29	RAPGEF5 (ENSCAFG00845008384) #30	ENSCAFG00845008800	IL6 (ENSCAFG00845008825) #31	TOMM7 (ENSCAFG00845008876) #32	FAM126A (ENSCAFG00845008950) #33	ENSCAFG00845009143	ENSCAFG00845009158	KLHL7 (ENSCAFG00845009174) #35	NUP42 (ENSCAFG00845009232) #37	ENSCAFG00845009315	MALSU1 (ENSCAFG00845009341)
Dingo	MODERN SPECIES	288	ANKMY2 (ENSCAFG00020001533)	BZW2 (ENSCAFG00020001541) #7	TSPAN13 (ENSCAFG00020001556) #8	AGR2 (ENSCAFG00020001560) #9	AHR (ENSCAFG00020001575) #11	SNX13 (ENSCAFG00020001653) #13	PRPS1L1 (ENSCAFG00020001874)	HDAC9 (ENSCAFG00020001908) #15	TWIST1 (ENSCAFG00020002135)	FERD3L (ENSCAFG00020002139)	POLR1F (ENSCAFG00020002140) #18	ENSCAFG00020002143	MACC1 (ENSCAFG00020002157) #20	ITGB8 (ENSCAFG00020002163) #21	ENSCAFG00020002172	ABCB5 (ENSCAFG00020002187) #22	SP4 (ENSCAFG00020002253) #25	DNAH11 (ENSCAFG00020002292) #27	CDCA7L (ENSCAFG00020002598) #29	RAPGEF5 (ENSCAFG00020002605) #30	IL6 (ENSCAFG00020002653) #31	ENSCAFG00020002667 #32	ENSCAFG00020002679 #33	ENSCAFG00020002684	ENSCAFG00020002686	KLHL7 (ENSCAFG00020002690) #35	NUP42 (ENSCAFG00020002692) #37	GPNMB (ENSCAFG00020002698)	MALSU1 (ENSCAFG00020002703)	IGF2BP3 (ENSCAFG00020002709)	TRA2A (ENSCAFG00020002745)
Red fox	MODERN SPECIES	12	BZW2 (ENSVVUG00000008686) #7	TSPAN13 (ENSVVUG00000008663) #8	AGR2 (ENSVVUG00000008636) #9	AHR (ENSVVUG00000008606) #11	ENSVVUG00000008596	SNX13 (ENSVVUG00000008580) #13	PRPS1L1 (ENSVVUG00000008539)	ENSVVUG00000008515	HDAC9 (ENSVVUG00000008429) #15	ENSVVUG00000008415	FERD3L (ENSVVUG00000008413)	TWISTNB (ENSVVUG00000008386) #18	TMEM196 (ENSVVUG00000008383)	MACC1 (ENSVVUG00000008370) #20	ITGB8 (ENSVVUG00000008336) #21	ABCB5 (ENSVVUG00000008164) #22	SP8 (ENSVVUG00000008108) #23	SP4 (ENSVVUG00000008046) #25	DNAH11 (ENSVVUG00000002278) #27	CDCA7L (ENSVVUG00000001402) #29	RAPGEF5 (ENSVVUG00000001380) #30	IL6 (ENSVVUG00000001319) #31	ENSVVUG00000001303 #32	FAM126A (ENSVVUG00000001204) #33	ENSVVUG00000001178	KLHL7 (ENSVVUG00000001128) #35	GPNMB (ENSVVUG00000001105)	IGF2BP3 (ENSVVUG00000001063)	TRA2A (ENSVVUG00000001045)	CCDC126 (ENSVVUG00000001003)	FAM221A (ENSVVUG00000000974)
Felidae	ANCESTRAL SPECIES	13	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010.c #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00990000212408	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Panthera	ANCESTRAL SPECIES	1	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010.c #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00990000212408	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010.c #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00990000212408	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
lion	MODERN SPECIES	2	BZW2 (ENSPLOG00000004703) #7	ENSPLOG00000004728 #8	AGR2 (ENSPLOG00000004751) #9	AHR (ENSPLOG00000004789) #11	SNX13 (ENSPLOG00000004829) #13	PRPS1L1 (ENSPLOG00000004870)	HDAC9 (ENSPLOG00000005066) #15	ENSPLOG00000005234	ENSPLOG00000005242 #16	TWIST1 (ENSPLOG00000005248)	FERD3L (ENSPLOG00000005253)	POLR1F (ENSPLOG00000005258) #18	TMEM196 (ENSPLOG00000005271) #19	MACC1 (ENSPLOG00000005282) #20	ITGB8 (ENSPLOG00000005294) #21	ABCB5 (ENSPLOG00000005325) #22	SP8 (ENSPLOG00000005374) #23	SP4 (ENSPLOG00000005405) #25	DNAH11 (ENSPLOG00000005484) #27	ENSPLOG00000005631	CDCA7L (ENSPLOG00000005663) #29	RAPGEF5 (ENSPLOG00000005752) #30	IL6 (ENSPLOG00000005885) #31	TOMM7 (ENSPLOG00000005923) #32	HYCC1 (ENSPLOG00000005987) #33	KLHL7 (ENSPLOG00000006071) #35	NUP42 (ENSPLOG00000006139) #37	GPNMB (ENSPLOG00000006176)	MALSU1 (ENSPLOG00000006242)	IGF2BP3 (ENSPLOG00000006261)	TRA2A (ENSPLOG00000006313)
leopard	MODERN SPECIES	9	ANKMY2 (ENSPPRG00000023052)	BZW2 (ENSPPRG00000023909) #7	TSPAN13 (ENSPPRG00000024563) #8	AGR2 (ENSPPRG00000024722) #9	AHR (ENSPPRG00000024905) #11	SNX13 (ENSPPRG00000024953) #13	PRPS1L1 (ENSPPRG00000021597)	HDAC9 (ENSPPRG00000016351) #15	ENSPPRG00000008154	TWIST1 (ENSPPRG00000021134)	FERD3L (ENSPPRG00000021108)	POLR1F (ENSPPRG00000005877) #18	TMEM196 (ENSPPRG00000005829) #19	MACC1 (ENSPPRG00000004920) #20	ITGB8 (ENSPPRG00000003937) #21	ABCB5 (ENSPPRG00000003288) #22	SP8 (ENSPPRG00000002787) #23	SP4 (ENSPPRG00000002366) #25	DNAH11 (ENSPPRG00000001981) #27	CDCA7L (ENSPPRG00000005070) #29	ENSPPRG00000004234 #30	ENSPPRG00000002217 #30	IL6 (ENSPPRG00000001365) #31	TOMM7 (ENSPPRG00000001184) #32	HYCC1 (ENSPPRG00000000882) #33	KLHL7 (ENSPPRG00000023124) #35	NUP42 (ENSPPRG00000024188) #37	GPNMB (ENSPPRG00000022277)	MALSU1 (ENSPPRG00000019365)	IGF2BP3 (ENSPPRG00000018062)	ENSPPRG00000020147
Tiger	MODERN SPECIES	293	SOSTDC1 (ENSPTIG00000007605)	LRRC72 (ENSPTIG00000006972)	ANKMY2 (ENSPTIG00000020367)	BZW2 (ENSPTIG00000013171) #7	TSPAN13 (ENSPTIG00000012079) #8	AGR2 (ENSPTIG00000010330) #9	AHR (ENSPTIG00000008421) #11	SNX13 (ENSPTIG00000021589) #13	PRPS1L1 (ENSPTIG00000007401)	HDAC9 (ENSPTIG00000007997) #15	FERD3L (ENSPTIG00000007267)	POLR1F (ENSPTIG00000021539) #18	TMEM196 (ENSPTIG00000019937) #19	MACC1 (ENSPTIG00000019121) #20	ITGB8 (ENSPTIG00000018464) #21	ABCB5 (ENSPTIG00000016699) #22	SP4 (ENSPTIG00000016118) #25	ENSPTIG00000007171	CDCA7L (ENSPTIG00000006990) #29	RAPGEF5 (ENSPTIG00000018422) #30	IL6 (ENSPTIG00000016661) #31	TOMM7 (ENSPTIG00000015954) #32	HYCC1 (ENSPTIG00000015096) #33	KLHL7 (ENSPTIG00000010367) #35	NUP42 (ENSPTIG00000009583) #37	GPNMB (ENSPTIG00000008247)	MALSU1 (ENSPTIG00000007567)	IGF2BP3 (ENSPTIG00000006021)	ENSPTIG00000005612	TRA2A (ENSPTIG00000021114)	CCDC126 (ENSPTIG00000020719)
Cat	MODERN SPECIES	1	BZW2 (ENSFCAG00000009109) #7	TSPAN13 (ENSFCAG00000030597) #8	AGR2 (ENSFCAG00000005428) #9	AHR (ENSFCAG00000005018) #11	SNX13 (ENSFCAG00000024117) #13	ENSFCAG00000048315	HDAC9 (ENSFCAG00000025113) #15	ENSFCAG00000037065	ENSFCAG00000050205 #16	TWIST1 (ENSFCAG00000039287)	FERD3L (ENSFCAG00000010289)	POLR1F (ENSFCAG00000025987) #18	TMEM196 (ENSFCAG00000036423) #19	MACC1 (ENSFCAG00000022683) #20	ITGB8 (ENSFCAG00000006893) #21	ABCB5 (ENSFCAG00000022127) #22	SP8 (ENSFCAG00000044413) #23	SP4 (ENSFCAG00000028758) #25	DNAH11 (ENSFCAG00000014410) #27	CDCA7L (ENSFCAG00000014417) #29	RAPGEF5 (ENSFCAG00000046261) #30	ENSFCAG00000047404	IL6 (ENSFCAG00000009165) #31	TOMM7 (ENSFCAG00000032204) #32	HYCC1 (ENSFCAG00000011016) #33	KLHL7 (ENSFCAG00000005805) #35	GPNMB (ENSFCAG00000026148)	MALSU1 (ENSFCAG00000029829)	IGF2BP3 (ENSFCAG00000030786)	TRA2A (ENSFCAG00000005361)	ENSFCAG00000049378
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Chiroptera	ANCESTRAL SPECIES	24	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880.a #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Microchiroptera	ANCESTRAL SPECIES	24	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880.a #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Greater horseshoe bat	MODERN SPECIES	12	ANKMY2 (ENSRFEG00010016575)	BZW2 (ENSRFEG00010016448) #7	TSPAN13 (ENSRFEG00010016399) #8	AGR2 (ENSRFEG00010016349) #9	AGR3 (ENSRFEG00010016282) #10	AHR (ENSRFEG00010016099) #11	SNX13 (ENSRFEG00010016005) #13	PRPS1L1 (ENSRFEG00010015977)	HDAC9 (ENSRFEG00010015571) #15	TWIST1 (ENSRFEG00010015542)	FERD3L (ENSRFEG00010015525)	POLR1F (ENSRFEG00010015486) #18	TMEM196 (ENSRFEG00010015350) #19	MACC1 (ENSRFEG00010015272) #20	ITGB8 (ENSRFEG00010015208) #21	ABCB5 (ENSRFEG00010014506) #22	SP8 (ENSRFEG00010014425) #23	SP4 (ENSRFEG00010014331) #25	DNAH11 (ENSRFEG00010010810) #27	CDCA7L (ENSRFEG00010010429) #29	RAPGEF5 (ENSRFEG00010010064) #30	IL6 (ENSRFEG00010009963) #31	TOMM7 (ENSRFEG00010009939) #32	ENSRFEG00010009909	HYCC1 (ENSRFEG00010009822) #33	KLHL7 (ENSRFEG00010009639) #35	GPNMB (ENSRFEG00010009561)	MALSU1 (ENSRFEG00010009519)	IGF2BP3 (ENSRFEG00010009439)	TRA2A (ENSRFEG00010009374)	CCDC126 (ENSRFEG00010009346)
Microbat	MODERN SPECIES	952	SOSTDC1 (ENSMLUG00000014930)	LRRC72 (ENSMLUG00000014931)	ANKMY2 (ENSMLUG00000014935)	BZW2 (ENSMLUG00000014943) #7	TSPAN13 (ENSMLUG00000014946) #8	ENSMLUG00000014948 #9	AHR (ENSMLUG00000000097) #11	SNX13 (ENSMLUG00000014405) #13	HDAC9 (ENSMLUG00000006585) #15	TWIST1 (ENSMLUG00000007047)	ENSMLUG00000006930	POLR1F (ENSMLUG00000008848) #18	ENSMLUG00000008871	MACC1 (ENSMLUG00000008877) #20	ITGB8 (ENSMLUG00000008896) #21	ABCB5 (ENSMLUG00000002224) #22	ENSMLUG00000027283	SP4 (ENSMLUG00000013137) #25	ENSMLUG00000013142 #27
Megabat	MODERN SPECIES	889																ABCB5 (ENSPVAG00000005101) #22	SP8 (ENSPVAG00000005109) #23
Equus	ANCESTRAL SPECIES	13	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.j	ENSGT00550000074801.g.a.s	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Donkey	MODERN SPECIES		ANKMY2 (ENSEASG00005021618)	ENSEASG00005021624 #7	TSPAN13 (ENSEASG00005021628) #8	AGR2 (ENSEASG00005038028) #9	AGR3 (ENSEASG00005021631) #10	AHR (ENSEASG00005021632) #11	SNX13 (ENSEASG00005021639) #13	ENSEASG00005030024	HDAC9 (ENSEASG00005021674) #15	ENSEASG00005021690 #16	TWIST1 (ENSEASG00005021693)	POLR1F (ENSEASG00005021702) #18	TMEM196 (ENSEASG00005021706) #19	MACC1 (ENSEASG00005021710) #20	ITGB8 (ENSEASG00005021716) #21	ABCB5 (ENSEASG00005021722) #22	SP8 (ENSEASG00005021726) #23	SP4 (ENSEASG00005021731) #25	DNAH11 (ENSEASG00005021871) #27	CDCA7L (ENSEASG00005021958) #29	ENSEASG00005035034 #30	ENSEASG00005021963 #30	IL6 (ENSEASG00005021965) #31	TOMM7 (ENSEASG00005036304) #32	HYCC1 (ENSEASG00005021974) #33	KLHL7 (ENSEASG00005021979) #35	NUP42 (ENSEASG00005035025) #37	GPNMB (ENSEASG00005021992)	MALSU1 (ENSEASG00005021994)	IGF2BP3 (ENSEASG00005021998)	TRA2A (ENSEASG00005022002)
Horse	MODERN SPECIES	25	AGR3 (ENSECAG00000012283) #10	AHR (ENSECAG00000013393) #11	SNX13 (ENSECAG00000021498) #13	HDAC9 (ENSECAG00000018816) #15	ENSECAG00000002478	ENSECAG00000018100	TWIST1 (ENSECAG00000033207)	ENSECAG00000059503 #16	ENSECAG00000029412	POLR1F (ENSECAG00000014563) #18	TMEM196 (ENSECAG00000015956)	MACC1 (ENSECAG00000017364) #20	ITGB8 (ENSECAG00000019215) #21	ENSECAG00000048959	ABCB5 (ENSECAG00000011338)	ENSECAG00000054779 #22	SP8 (ENSECAG00000040341) #23	ENSECAG00000043394	SP4 (ENSECAG00000023324) #25	DNAH11 (ENSECAG00000004819) #27	CDCA7L (ENSECAG00000022400) #29	RAPGEF5 (ENSECAG00000000395) #30	TOMM7 (ENSECAG00000021807) #32	ENSECAG00000055291	IL6 (ENSECAG00000016482) #31	ENSECAG00000043335	HYCC1 (ENSECAG00000023479) #33	KLHL7 (ENSECAG00000010574) #35	NUP42 (ENSECAG00000019832) #37	GPNMB (ENSECAG00000000658)	MALSU1 (ENSECAG00000016105)
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.j	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Suina	ANCESTRAL SPECIES	15	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.j	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Pig	MODERN SPECIES	17	SOSTDC1 (ENSSSCG00000021126)	LRRC72 (ENSSSCG00000015361)	ANKMY2 (ENSSSCG00000015360)	BZW2 (ENSSSCG00000023118) #7	TSPAN13 (ENSSSCG00000015362) #8	AGR2 (ENSSSCG00000015363) #9	AHR (ENSSSCG00000030484) #11	SNX13 (ENSSSCG00000024761) #13	HDAC9 (ENSSSCG00000015368) #15	TWIST1 (ENSSSCG00000058909)	FERD3L (ENSSSCG00000015371)	POLR1F (ENSSSCG00000025298) #18	TMEM196 (ENSSSCG00000015373) #19	MACC1 (ENSSSCG00000024802) #20	ITGB8 (ENSSSCG00000015375) #21	ABCB5 (ENSSSCG00000015377) #22	ENSSSCG00000053532	SP8 (ENSSSCG00000031078) #23	ENSSSCG00000052264	SP4 (ENSSSCG00000015378) #25	DNAH11 (ENSSSCG00000015379) #27	ENSSSCG00000042690	ENSSSCG00000042226	CDCA7L (ENSSSCG00000015380) #29	ENSSSCG00000035257	ENSSSCG00000054384 #30	ENSSSCG00000015383 #30	IL6 (ENSSSCG00000020970) #31	TOMM7 (ENSSSCG00000015384) #32	HYCC1 (ENSSSCG00000015386) #33	KLHL7 (ENSSSCG00000038469) #35
Chacoan peccary	MODERN SPECIES	100	ENSCWAG00000002763	BZW2 (ENSCWAG00000002731) #7	TSPAN13 (ENSCWAG00000002711) #8	AGR2 (ENSCWAG00000002684) #9	AGR3 (ENSCWAG00000002657) #10	AHR (ENSCWAG00000002645) #11	SNX13 (ENSCWAG00000002619) #13	ENSCWAG00000002602	HDAC9 (ENSCWAG00000002543) #15	TWIST1 (ENSCWAG00000002519)	FERD3L (ENSCWAG00000002512)	POLR1F (ENSCWAG00000002503) #18	TMEM196 (ENSCWAG00000002480) #19	MACC1 (ENSCWAG00000002457) #20	ITGB8 (ENSCWAG00000002423) #21	ABCB5 (ENSCWAG00000002372) #22	SP8 (ENSCWAG00000002346) #23	SP4 (ENSCWAG00000002318) #25	DNAH11 (ENSCWAG00000001922) #27	CDCA7L (ENSCWAG00000001771) #29	RAPGEF5 (ENSCWAG00000001550) #30	IL6 (ENSCWAG00000001472) #31	TOMM7 (ENSCWAG00000001462) #32	HYCC1 (ENSCWAG00000001425) #33	KLHL7 (ENSCWAG00000001386) #35	NUP42 (ENSCWAG00000001329) #37	GPNMB (ENSCWAG00000001294)	MALSU1 (ENSCWAG00000001279)	IGF2BP3 (ENSCWAG00000001238)	TRA2A (ENSCWAG00000001213)	CCDC126 (ENSCWAG00000001196)
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.j	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Camelidae	ANCESTRAL SPECIES	2	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Arabian camel	MODERN SPECIES	33	TSPAN13 (ENSCDRG00005005346) #8	AGR2 (ENSCDRG00005005382) #9	AGR3 (ENSCDRG00005005423) #10	AHR (ENSCDRG00005005491) #11	SNX13 (ENSCDRG00005005525) #13	PRPS1L1 (ENSCDRG00005005612)	HDAC9 (ENSCDRG00005005657) #15	ENSCDRG00005005889 #16	TWIST1 (ENSCDRG00005005895)	FERD3L (ENSCDRG00005005910)	ENSCDRG00005005921	POLR1F (ENSCDRG00005005934) #18	TMEM196 (ENSCDRG00005005947) #19	MACC1 (ENSCDRG00005005995) #20	ITGB8 (ENSCDRG00005006022) #21	ABCB5 (ENSCDRG00005006056) #22	SP8 (ENSCDRG00005006175) #23	SP4 (ENSCDRG00005006199) #25	DNAH11 (ENSCDRG00005006248) #27	CDCA7L (ENSCDRG00005006381) #29	RAPGEF5 (ENSCDRG00005006590) #30	TOMM7 (ENSCDRG00005006889) #32	IL6 (ENSCDRG00005006980) #31	HYCC1 (ENSCDRG00005007124) #33	ENSCDRG00005007248	KLHL7 (ENSCDRG00005007279) #35	GPNMB (ENSCDRG00005000107)	MALSU1 (ENSCDRG00005000140)	IGF2BP3 (ENSCDRG00005000158)	TRA2A (ENSCDRG00005000208)	CCDC126 (ENSCDRG00005000272)
Alpaca	MODERN SPECIES	991												POLR1F (ENSVPAG00000002079) #18	TMEM196 (ENSVPAG00000002082) #19	MACC1 (ENSVPAG00000002084) #20	ITGB8 (ENSVPAG00000002085) #21	ABCB5 (ENSVPAG00000002086) #22	SP8 (ENSVPAG00000002087) #23	DNAH11 (ENSVPAG00000002089) #27	CDCA7L (ENSVPAG00000002091) #29
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.j	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Cetacea	ANCESTRAL SPECIES	13	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.j	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000166333	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167.c
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT01000000221772	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000166333	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167.c
Sperm whale	MODERN SPECIES	16	TSPAN13 (ENSPCTG00005001277) #8	AGR2 (ENSPCTG00005001307) #9	AGR3 (ENSPCTG00005001348) #10	ENSPCTG00005001369	AHR (ENSPCTG00005001387) #11	SNX13 (ENSPCTG00005001441) #13	ENSPCTG00005001512	HDAC9 (ENSPCTG00005001567) #15	ENSPCTG00005001665	ENSPCTG00005001674 #16	TWIST1 (ENSPCTG00005001684)	FERD3L (ENSPCTG00005001689)	TWISTNB (ENSPCTG00005001697) #18	TMEM196 (ENSPCTG00005001717) #19	ITGB8 (ENSPCTG00005001751) #21	ENSPCTG00005001784 #22	SP8 (ENSPCTG00005001801) #23	SP4 (ENSPCTG00005001812) #25	ENSPCTG00005001827	DNAH11 (ENSPCTG00005002062) #27	CDCA7L (ENSPCTG00005002828) #29	RAPGEF5 (ENSPCTG00005002875) #30	IL6 (ENSPCTG00005003017) #31	ENSPCTG00005003031 #32	FAM126A (ENSPCTG00005003061) #33	KLHL7 (ENSPCTG00005003098) #35	NUPL2 (ENSPCTG00005003130) #37	GPNMB (ENSPCTG00005003153)	ENSPCTG00005003167	MALSU1 (ENSPCTG00005003177)	IGF2BP3 (ENSPCTG00005003193)
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT01000000221772	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000166333	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167.c
Dolphin	MODERN SPECIES	223																ABCB5 (ENSTTRG00000013383) #22	ENSTTRG00000013387 #23
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT01000000221772	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000166333	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167.c
Vaquita	DUPLICATION
Vaquita	MODERN SPECIES	20	AGR2 (ENSPSNG00000008587) #9	AGR3 (ENSPSNG00000008700) #10	AHR (ENSPSNG00000008778) #11	SNX13 (ENSPSNG00000008877) #13	HDAC9 (ENSPSNG00000009029) #15	ENSPSNG00000009173 #16	TWIST1 (ENSPSNG00000009224)	FERD3L (ENSPSNG00000009256)	ENSPSNG00000009323	POLR1F (ENSPSNG00000009354) #18	TMEM196 (ENSPSNG00000009438) #19	MACC1 (ENSPSNG00000009595) #20	ITGB8 (ENSPSNG00000009703) #21	ENSPSNG00000009751	ENSPSNG00000009781 #22	ENSPSNG00000009873 #22	SP8 (ENSPSNG00000006838) #23	ENSPSNG00000006887	SP4 (ENSPSNG00000007062) #25	ENSPSNG00000007110	DNAH11 (ENSPSNG00000007306) #27	CDCA7L (ENSPSNG00000008676) #29	RAPGEF5 (ENSPSNG00000008908) #30	IL6 (ENSPSNG00000009204) #31	HYCC1 (ENSPSNG00000009328) #33	KLHL7 (ENSPSNG00000009482) #35	NUP42 (ENSPSNG00000009532) #37	GPNMB (ENSPSNG00000009579)	MALSU1 (ENSPSNG00000009639)	IGF2BP3 (ENSPSNG00000009708)	ENSPSNG00000009952
Vaquita	MODERN SPECIES	20	TSPAN13 (ENSPSNG00000008556) #8	AGR2 (ENSPSNG00000008587) #9	AGR3 (ENSPSNG00000008700) #10	AHR (ENSPSNG00000008778) #11	SNX13 (ENSPSNG00000008877) #13	HDAC9 (ENSPSNG00000009029) #15	ENSPSNG00000009173 #16	TWIST1 (ENSPSNG00000009224)	FERD3L (ENSPSNG00000009256)	ENSPSNG00000009323	POLR1F (ENSPSNG00000009354) #18	TMEM196 (ENSPSNG00000009438) #19	MACC1 (ENSPSNG00000009595) #20	ITGB8 (ENSPSNG00000009703) #21	ENSPSNG00000009751	ENSPSNG00000009781 #22	ENSPSNG00000009873 #22	SP8 (ENSPSNG00000006838) #23	ENSPSNG00000006887	SP4 (ENSPSNG00000007062) #25	ENSPSNG00000007110	DNAH11 (ENSPSNG00000007306) #27	CDCA7L (ENSPSNG00000008676) #29	RAPGEF5 (ENSPSNG00000008908) #30	IL6 (ENSPSNG00000009204) #31	HYCC1 (ENSPSNG00000009328) #33	KLHL7 (ENSPSNG00000009482) #35	NUP42 (ENSPSNG00000009532) #37	GPNMB (ENSPSNG00000009579)	MALSU1 (ENSPSNG00000009639)	IGF2BP3 (ENSPSNG00000009708)
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT01000000221772	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167.c	ENSGT00910000147494
Beluga whale	MODERN SPECIES	72	ANKMY2 (ENSDLEG00000019677)	BZW2 (ENSDLEG00000019681) #7	TSPAN13 (ENSDLEG00000019687) #8	AGR2 (ENSDLEG00000019695) #9	AHR (ENSDLEG00000019698) #11	SNX13 (ENSDLEG00000019708) #13	HDAC9 (ENSDLEG00000019802) #15	ENSDLEG00000020794	ENSDLEG00000020800	ENSDLEG00000020805 #16	TWIST1 (ENSDLEG00000020806)	FERD3L (ENSDLEG00000020808)	TWISTNB (ENSDLEG00000020810) #18	TMEM196 (ENSDLEG00000020812) #19	ITGB8 (ENSDLEG00000020850) #21	ENSDLEG00000020866 #22	SP8 (ENSDLEG00000020883) #23	ENSDLEG00000020889	SP4 (ENSDLEG00000020894) #25	ENSDLEG00000020902	DNAH11 (ENSDLEG00000021082) #27	CDCA7L (ENSDLEG00000021687) #29	RAPGEF5 (ENSDLEG00000021689) #30	IL6 (ENSDLEG00000021697) #31	ENSDLEG00000021700 #32	FAM126A (ENSDLEG00000021707) #33	KLHL7 (ENSDLEG00000021717) #35	GPNMB (ENSDLEG00000021726)	MALSU1 (ENSDLEG00000021728)	IGF2BP3 (ENSDLEG00000021731)	ENSDLEG00000021737
Narwhal	DUPLICATION
Narwhal	MODERN SPECIES	306	BZW2 (ENSMMNG00015005981) #7	TSPAN13 (ENSMMNG00015005939) #8	AGR2 (ENSMMNG00015005919) #9	AGR3 (ENSMMNG00015005889) #10	AHR (ENSMMNG00015005766) #11	SNX13 (ENSMMNG00015005684) #13	ENSMMNG00015005627	HDAC9 (ENSMMNG00015005496) #15	ENSMMNG00015005446 #16	TWIST1 (ENSMMNG00015005433)	FERD3L (ENSMMNG00015005424)	POLR1F (ENSMMNG00015005418) #18	TMEM196 (ENSMMNG00015014600) #19	MACC1 (ENSMMNG00015014571) #20	ITGB8 (ENSMMNG00015014541) #21	ENSMMNG00015014524 #22	ENSMMNG00015014504 #22	SP8 (ENSMMNG00015014490) #23	ENSMMNG00015014481	ENSMMNG00015014468	SP4 (ENSMMNG00015014456) #25	DNAH11 (ENSMMNG00015014124) #27	CDCA7L (ENSMMNG00015013916) #29	RAPGEF5 (ENSMMNG00015013835) #30	IL6 (ENSMMNG00015013785) #31	ENSMMNG00015013758 #32	HYCC1 (ENSMMNG00015013717) #33	KLHL7 (ENSMMNG00015013694) #35	NUP42 (ENSMMNG00015013671) #37	GPNMB (ENSMMNG00015013654)	MALSU1 (ENSMMNG00015013639)
Narwhal	MODERN SPECIES	306	TSPAN13 (ENSMMNG00015005939) #8	AGR2 (ENSMMNG00015005919) #9	AGR3 (ENSMMNG00015005889) #10	AHR (ENSMMNG00015005766) #11	SNX13 (ENSMMNG00015005684) #13	ENSMMNG00015005627	HDAC9 (ENSMMNG00015005496) #15	ENSMMNG00015005446 #16	TWIST1 (ENSMMNG00015005433)	FERD3L (ENSMMNG00015005424)	POLR1F (ENSMMNG00015005418) #18	TMEM196 (ENSMMNG00015014600) #19	MACC1 (ENSMMNG00015014571) #20	ITGB8 (ENSMMNG00015014541) #21	ENSMMNG00015014524 #22	ENSMMNG00015014504 #22	SP8 (ENSMMNG00015014490) #23	ENSMMNG00015014481	ENSMMNG00015014468	SP4 (ENSMMNG00015014456) #25	DNAH11 (ENSMMNG00015014124) #27	CDCA7L (ENSMMNG00015013916) #29	RAPGEF5 (ENSMMNG00015013835) #30	IL6 (ENSMMNG00015013785) #31	ENSMMNG00015013758 #32	HYCC1 (ENSMMNG00015013717) #33	KLHL7 (ENSMMNG00015013694) #35	NUP42 (ENSMMNG00015013671) #37	GPNMB (ENSMMNG00015013654)	MALSU1 (ENSMMNG00015013639)	IGF2BP3 (ENSMMNG00015013611)
Blue whale	MODERN SPECIES	20	TSPAN13 (ENSBMSG00010006035) #8	AGR2 (ENSBMSG00010006058) #9	AGR3 (ENSBMSG00010006105) #10	AHR (ENSBMSG00010006134) #11	SNX13 (ENSBMSG00010006158) #13	ENSBMSG00010006178	HDAC9 (ENSBMSG00010006273) #15	ENSBMSG00010006554 #16	TWIST1 (ENSBMSG00010006562)	FERD3L (ENSBMSG00010006572)	POLR1F (ENSBMSG00010006586) #18	TMEM196 (ENSBMSG00010006606) #19	ENSBMSG00010006634	MACC1 (ENSBMSG00010006649) #20	ITGB8 (ENSBMSG00010006675) #21	ABCB5 (ENSBMSG00010006722) #22	SP8 (ENSBMSG00010006762) #23	SP4 (ENSBMSG00010006784) #25	ENSBMSG00010006798	DNAH11 (ENSBMSG00010006886) #27	CDCA7L (ENSBMSG00010007132) #29	RAPGEF5 (ENSBMSG00010007194) #30	IL6 (ENSBMSG00010007260) #31	ENSBMSG00010007284 #32	HYCC1 (ENSBMSG00010007306) #33	KLHL7 (ENSBMSG00010007329) #35	NUP42 (ENSBMSG00010007347) #37	GPNMB (ENSBMSG00010007358)	MALSU1 (ENSBMSG00010007370)	IGF2BP3 (ENSBMSG00010007379)	ENSBMSG00010007410
Pecora	ANCESTRAL SPECIES	11	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602.j #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Percora_a	ANCESTRAL SPECIES	11	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602.j #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Bovidae	ANCESTRAL SPECIES	12	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602.j #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Bovinae	ANCESTRAL SPECIES	8	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00950000182803.B.d.a.i.a	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT01100000263504.a.b.b.a.b	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00950000183087.A.a.a.a.a.a.a	ENSGT00390000011295.b #33	ENSGT00940000155602.j #35	ENSGT00510000046985.h.b.a.a.a	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035
American bison	MODERN SPECIES	3191																ABCB5 (ENSBBBG00000011539) #22	ENSBBBG00000011478 #23
Bos	ANCESTRAL SPECIES	8	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT01100000263504.a.b.b.a.b	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00950000183087.A.a.a.a.a.a.a	ENSGT00390000011295.b #33	ENSGT00940000155602.j #35	ENSGT00510000046985.h.b.a.a.a	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035
Bos_b	ANCESTRAL SPECIES	7	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000164207	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT01100000263504.a.b.b.a.b	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833.c #32	ENSGT00950000183087.A.a.a.a.a.a.a	ENSGT00390000011295.b #33	ENSGT00940000155602.j #35	ENSGT00510000046985.h.b.a.a.a	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035
Hybrid Bos Indicus	MODERN SPECIES	23	BZW2 (ENSBIXG00005018638) #7	ENSBIXG00005018651	TSPAN13 (ENSBIXG00005018680) #8	AGR2 (ENSBIXG00005018693) #9	AGR3 (ENSBIXG00005018725) #10	ENSBIXG00005003040	AHR (ENSBIXG00005018791) #11	SNX13 (ENSBIXG00005018950) #13	PRPS1L1 (ENSBIXG00005019014)	HDAC9 (ENSBIXG00005003141) #15	TWIST1 (ENSBIXG00005003158)	FERD3L (ENSBIXG00005019410)	POLR1F (ENSBIXG00005019440) #18	MACC1 (ENSBIXG00005003175) #20	ITGB8 (ENSBIXG00005019604) #21	ABCB5 (ENSBIXG00005007058) #22	SP8 (ENSBIXG00005003233) #23	ENSBIXG00005019802	SP4 (ENSBIXG00005003251) #25	DNAH11 (ENSBIXG00005005738) #27	CDCA7L (ENSBIXG00005019995) #29	RAPGEF5 (ENSBIXG00005003316) #30	IL6 (ENSBIXG00005003399) #31	ENSBIXG00005003415 #32	ENSBIXG00005020345	HYCC1 (ENSBIXG00005020386) #33	ENSBIXG00005020450 #35	NUP42 (ENSBIXG00005020467) #37	GPNMB (ENSBIXG00005020528)	MALSU1 (ENSBIXG00005003472)	IGF2BP3 (ENSBIXG00005020602)
Cow	MODERN SPECIES	23	BZW2 (ENSBTAG00000014262) #7	TSPAN13 (ENSBTAG00000012805) #8	AGR2 (ENSBTAG00000024406) #9	AGR3 (ENSBTAG00000045578) #10	ENSBTAG00000054646	AHR (ENSBTAG00000007746) #11	SNX13 (ENSBTAG00000014074) #13	PRPS1L1 (ENSBTAG00000033954)	HDAC9 (ENSBTAG00000003808) #15	TWIST1 (ENSBTAG00000046922)	FERD3L (ENSBTAG00000039955)	POLR1F (ENSBTAG00000006721) #18	TMEM196 (ENSBTAG00000044012) #19	MACC1 (ENSBTAG00000003751) #20	ITGB8 (ENSBTAG00000003709) #21	ABCB5 (ENSBTAG00000002595) #22	SP8 (ENSBTAG00000002604) #23	ENSBTAG00000045673	SP4 (ENSBTAG00000014389) #25	DNAH11 (ENSBTAG00000013078) #27	CDCA7L (ENSBTAG00000004976) #29	RAPGEF5 (ENSBTAG00000015539) #30	IL6 (ENSBTAG00000014921) #31	TOMM7 (ENSBTAG00000051150) #32	ENSBTAG00000033806	HYCC1 (ENSBTAG00000004575) #33	KLHL7 (ENSBTAG00000016010) #35	ENSBTAG00000049132	NUP42 (ENSBTAG00000016014) #37	GPNMB (ENSBTAG00000000604)	MALSU1 (ENSBTAG00000019403)
Bos_a	ANCESTRAL SPECIES	12	ENSGT00940000153289.a.b	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00950000183087.A.a.a.a.a.a.a	ENSGT00390000011295.b #33	ENSGT00940000155602.j #35	ENSGT00510000046985.h.b.a.a.a	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Domestic yak	MODERN SPECIES	23	BZW2 (ENSBGRG00000002382) #7	AGR2 (ENSBGRG00000002340) #9	TSPAN13 (ENSBGRG00000002298) #8	AGR3 (ENSBGRG00000002262) #10	AHR (ENSBGRG00000002193) #11	SNX13 (ENSBGRG00000002167) #13	PRPS1L1 (ENSBGRG00000002154)	ENSBGRG00000002126	HDAC9 (ENSBGRG00000001751) #15	TWIST1 (ENSBGRG00000001656)	ENSBGRG00000001648	ENSBGRG00000001639	POLR1F (ENSBGRG00000001608) #18	MACC1 (ENSBGRG00000001496) #20	ITGB8 (ENSBGRG00000001411) #21	ABCB5 (ENSBGRG00000001233) #22	SP8 (ENSBGRG00000001195) #23	ENSBGRG00000001176	SP4 (ENSBGRG00000001146) #25	DNAH11 (ENSBGRG00000001054) #27	CDCA7L (ENSBGRG00000000922) #29	RAPGEF5 (ENSBGRG00000000895) #30	IL6 (ENSBGRG00000000868) #31	TOMM7 (ENSBGRG00000000858) #32	ENSBGRG00000000852	ENSBGRG00000000842	ENSBGRG00000000814	HYCC1 (ENSBGRG00000000758) #33	ENSBGRG00000000725 #35	NUP42 (ENSBGRG00000000689) #37	GPNMB (ENSBGRG00000000543)
Wild yak	MODERN SPECIES	1262																ABCB5 (ENSBMUG00000021293) #22	SP8 (ENSBMUG00000021342) #23
Caprinae	ANCESTRAL SPECIES	10	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00910000147712 #16	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602.j #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b
Rambouillet Sheep	MODERN SPECIES	20	BZW2 (ENSOARG00020002131) #7	TSPAN13 (ENSOARG00020002191) #8	AGR2 (ENSOARG00020002209) #9	AGR3 (ENSOARG00020002223) #10	AHR (ENSOARG00020002260) #11	SNX13 (ENSOARG00020002353) #13	PRPS1L1 (ENSOARG00020002500)	HDAC9 (ENSOARG00020002586) #15	ENSOARG00020002790 #16	TWIST1 (ENSOARG00020002796)	FERD3L (ENSOARG00020002801)	POLR1F (ENSOARG00020002814) #18	TMEM196 (ENSOARG00020002822) #19	MACC1 (ENSOARG00020002851) #20	ITGB8 (ENSOARG00020002879) #21	ABCB5 (ENSOARG00020002948) #22	SP8 (ENSOARG00020003038) #23	SP4 (ENSOARG00020003087) #25	DNAH11 (ENSOARG00020003395) #27	CDCA7L (ENSOARG00020005494) #29	RAPGEF5 (ENSOARG00020005723) #30	IL6 (ENSOARG00020006183) #31	TOMM7 (ENSOARG00020006206) #32	FAM126A (ENSOARG00020006243) #33	KLHL7 (ENSOARG00020006541) #35	NUP42 (ENSOARG00020006652) #37	GPNMB (ENSOARG00020006751)	MALSU1 (ENSOARG00020006835)	IGF2BP3 (ENSOARG00020006907)	ENSOARG00020007084	CCDC126 (ENSOARG00020007151)
Goat	MODERN SPECIES	23	AGR3 (ENSCHIG00000018002) #10	ENSCHIG00000025779	ENSCHIG00000022015	AHR (ENSCHIG00000019440) #11	SNX13 (ENSCHIG00000014483) #13	PRPS1L1 (ENSCHIG00000008267)	ENSCHIG00000020379	HDAC9 (ENSCHIG00000025824) #15	ENSCHIG00000012294	FERD3L (ENSCHIG00000010496)	POLR1F (ENSCHIG00000024078) #18	TMEM196 (ENSCHIG00000024424) #19	MACC1 (ENSCHIG00000015533) #20	ITGB8 (ENSCHIG00000019429) #21	ENSCHIG00000008550	ABCB5 (ENSCHIG00000012373) #22	SP8 (ENSCHIG00000010739) #23	SP4 (ENSCHIG00000009631) #25	DNAH11 (ENSCHIG00000011401) #27	CDCA7L (ENSCHIG00000012867) #29	RAPGEF5 (ENSCHIG00000003129) #30	IL6 (ENSCHIG00000012291) #31	TOMM7 (ENSCHIG00000023448) #32	HYCC1 (ENSCHIG00000014509) #33	ENSCHIG00000026932 #35	NUP42 (ENSCHIG00000009608) #37	GPNMB (ENSCHIG00000022609)	ENSCHIG00000002492	MALSU1 (ENSCHIG00000023356)	IGF2BP3 (ENSCHIG00000025829)	ENSCHIG00000016691
Siberian musk deer	MODERN SPECIES	88	ANKMY2 (ENSMMSG00000024481)	BZW2 (ENSMMSG00000024478) #7	TSPAN13 (ENSMMSG00000024475) #8	AGR2 (ENSMMSG00000024474) #9	AGR3 (ENSMMSG00000024472) #10	AHR (ENSMMSG00000024470) #11	SNX13 (ENSMMSG00000024469) #13	PRPS1L1 (ENSMMSG00000024467)	HDAC9 (ENSMMSG00000024464) #15	TWIST1 (ENSMMSG00000024459)	FERD3L (ENSMMSG00000024458)	POLR1F (ENSMMSG00000024457) #18	TMEM196 (ENSMMSG00000024455) #19	MACC1 (ENSMMSG00000024454) #20	ITGB8 (ENSMMSG00000024452) #21	ABCB5 (ENSMMSG00000024447) #22	SP8 (ENSMMSG00000024446) #23	SP4 (ENSMMSG00000024444) #25	DNAH11 (ENSMMSG00000024436) #27	CDCA7L (ENSMMSG00000024433) #29	RAPGEF5 (ENSMMSG00000024430) #30	ENSMMSG00000024428 #31	TOMM7 (ENSMMSG00000024427) #32	HYCC1 (ENSMMSG00000024425) #33	ENSMMSG00000024424 #35	NUP42 (ENSMMSG00000024423) #37	GPNMB (ENSMMSG00000024422)	MALSU1 (ENSMMSG00000024421)	IGF2BP3 (ENSMMSG00000024420)	ENSMMSG00000024419	CCDC126 (ENSMMSG00000024418)
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	9	HGF (ENSCHYG00000019398)	CACNA2D1 (ENSCHYG00000018295)	PCLO (ENSCHYG00000018027)	SEMA3E (ENSCHYG00000017799)	SEMA3A (ENSCHYG00000017259)	ENSCHYG00000017154	SEMA3D (ENSCHYG00000017029)	GRM3 (ENSCHYG00000016901)	ELAPOR2 (ENSCHYG00000016227)	DMTF1 (ENSCHYG00000015916)	ENSCHYG00000015800	ENSCHYG00000015727	CROT (ENSCHYG00000015108)	ABCB4 (ENSCHYG00000014837)	ENSCHYG00000014783	ENSCHYG00000014691 #22	ENSCHYG00000014646	RUNDC3B (ENSCHYG00000014336)	ENSCHYG00000014088	DBF4 (ENSCHYG00000014001)	CCDC126 (ENSCHYG00000013962)	TRA2A (ENSCHYG00000013850)	IGF2BP3 (ENSCHYG00000013623)	MALSU1 (ENSCHYG00000013555)	ENSCHYG00000013534	GPNMB (ENSCHYG00000013494)	NUP42 (ENSCHYG00000012296) #37	ENSCHYG00000012189 #35	ENSCHYG00000012174	ENSCHYG00000012166	ENSCHYG00000012138
Yarkand deer	MODERN SPECIES	9	AGR2 (ENSCHYG00000008193) #9	AGR3 (ENSCHYG00000008239) #10	ENSCHYG00000008294	AHR (ENSCHYG00000008314) #11	SNX13 (ENSCHYG00000008391) #13	PRPS1L1 (ENSCHYG00000008702)	HDAC9 (ENSCHYG00000008905) #15	ENSCHYG00000009538 #16	ENSCHYG00000009595	FERD3L (ENSCHYG00000009629)	POLR1F (ENSCHYG00000009700) #18	TMEM196 (ENSCHYG00000009756) #19	ENSCHYG00000009866	MACC1 (ENSCHYG00000009890) #20	ITGB8 (ENSCHYG00000009946) #21	ABCB5 (ENSCHYG00000010073) #22	SP8 (ENSCHYG00000010508) #23	ENSCHYG00000010545	ENSCHYG00000010564	SP4 (ENSCHYG00000010584) #25	DNAH11 (ENSCHYG00000010690) #27	CDCA7L (ENSCHYG00000010925) #29	RAPGEF5 (ENSCHYG00000011187) #30	ENSCHYG00000011799 #31	ENSCHYG00000011839 #32	HYCC1 (ENSCHYG00000011929) #33	ENSCHYG00000012138	ENSCHYG00000012166	ENSCHYG00000012174	ENSCHYG00000012189 #35	NUP42 (ENSCHYG00000012296) #37
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT00940000164009	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b	ENSGT00770000120611.B
Afrotheria	ANCESTRAL SPECIES	5	ENSGT00390000014900.b.b.a	ENSGT00940000164009	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b	ENSGT00770000120611.B
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT00390000014900.b.b.a	ENSGT00940000164009	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340 #22	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b	ENSGT00770000120611.B
Elephant	MODERN SPECIES	428	ENSLAFG00000003939	ANKMY2 (ENSLAFG00000003941)	BZW2 (ENSLAFG00000003942) #7	TSPAN13 (ENSLAFG00000005956) #8	AGR2 (ENSLAFG00000005959) #9	AGR3 (ENSLAFG00000005961) #10	AHR (ENSLAFG00000015328) #11	SNX13 (ENSLAFG00000010912) #13	ENSLAFG00000026856	HDAC9 (ENSLAFG00000015187) #15	FERD3L (ENSLAFG00000012782)	POLR1F (ENSLAFG00000008755) #18	ENSLAFG00000015261	MACC1 (ENSLAFG00000004099) #20	ITGB8 (ENSLAFG00000001226) #21	ABCB5 (ENSLAFG00000011833) #22	ENSLAFG00000026096	SP4 (ENSLAFG00000022398) #25	DNAH11 (ENSLAFG00000017652) #27	CDCA7L (ENSLAFG00000017695) #29	RAPGEF5 (ENSLAFG00000014919) #30	IL6 (ENSLAFG00000015573) #31	TOMM7 (ENSLAFG00000027187) #32	HYCC1 (ENSLAFG00000007515) #33	KLHL7 (ENSLAFG00000007517) #35	NUP42 (ENSLAFG00000007523) #37	GPNMB (ENSLAFG00000022142)	MALSU1 (ENSLAFG00000011921)	IGF2BP3 (ENSLAFG00000011924)	TRA2A (ENSLAFG00000006598)	CCDC126 (ENSLAFG00000008792)
Hyrax	MODERN SPECIES	1556																ABCB5 (ENSPCAG00000007730) #22
Tenrec	MODERN SPECIES	1778																ENSETEG00000012235 #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Sloth	MODERN SPECIES	2667																ABCB5 (ENSCHOG00000002492) #22
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	1763	ENSDNOG00000035889	ENSDNOG00000045387	ENSDNOG00000047728	METTL5 (ENSDNOG00000013460)	SSB (ENSDNOG00000013450)	KLHL23 (ENSDNOG00000006434)	PHOSPHO2 (ENSDNOG00000025476)	CFAP210 (ENSDNOG00000008932)	PPIG (ENSDNOG00000031313)	FASTKD1 (ENSDNOG00000008867)	KLHL41 (ENSDNOG00000041793)	BBS5 (ENSDNOG00000007680)	LRP2 (ENSDNOG00000002598)	DHRS9 (ENSDNOG00000043900)	ENSDNOG00000040765	ENSDNOG00000041851 #22
Armadillo	MODERN SPECIES	2135																ABCB5 (ENSDNOG00000004952) #22	ENSDNOG00000031416
Marsupialia	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Marsupialia_b	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Diprotodontia	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Wallaby	MODERN SPECIES	3814																ENSMEUG00000010593 #22
Sauria	ANCESTRAL SPECIES	15	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000176107	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000166052	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Lepidosauria	ANCESTRAL SPECIES	318															ENSGT00940000155287	ENSGT00940000161340 #22
Episquamata	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Toxicofera	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Lizard	MODERN SPECIES	19																ENSACAG00000001058 #22
tuatara	MODERN SPECIES	1878						ENSSPUG00000007676 #13	ENSSPUG00000007655 #13	ENSSPUG00000007649	HDAC9 (ENSSPUG00000007631) #15	POLR1F (ENSSPUG00000007595) #18	ENSSPUG00000007583	ENSSPUG00000007578	MACC1 (ENSSPUG00000007564) #20	ITGB8 (ENSSPUG00000007535) #21	ENSSPUG00000007506	ABCB5 (ENSSPUG00000007032) #22	SP4 (ENSSPUG00000006899) #25	DNAH11 (ENSSPUG00000006480) #27	CDCA7L (ENSSPUG00000006361) #29	RAPGEF5 (ENSSPUG00000006313) #30	ENSSPUG00000006284 #30	TOMM7 (ENSSPUG00000006271) #32	HYCC1 (ENSSPUG00000006252) #33	KLHL7 (ENSSPUG00000006222) #35	NUP42 (ENSSPUG00000006209) #37	GPNMB (ENSSPUG00000006192)	MALSU1 (ENSSPUG00000006180)	IGF2BP3 (ENSSPUG00000006162)	ENSSPUG00000006151	TRA2A (ENSSPUG00000006143)	CCDC126 (ENSSPUG00000006136)
Archelosauria	ANCESTRAL SPECIES	6	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000176107	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000166052	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Cryptodira	ANCESTRAL SPECIES	4	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000176107	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000166052	ENSGT00940000155287	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000176107	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000166052.a.a.b	ENSGT00940000155287	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027
Testudinidae	ANCESTRAL SPECIES	1	ENSGT00390000012561.a.r #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000162831	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000176107	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000166052.a.a.b	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Abingdon island giant tortoise	MODERN SPECIES	951																ABCB5 (ENSCABG00000004368) #22	SP8 (ENSCABG00000004361) #23	ENSCABG00000004359 #25	ENSCABG00000004358 #25
Goode s thornscrub tortoise	MODERN SPECIES	11	TSPAN13 (ENSGEVG00005011518) #8	AGR2 (ENSGEVG00005011579) #9	AGR3 (ENSGEVG00005011646) #10	AHR (ENSGEVG00005011706) #11	SNX13 (ENSGEVG00005011797) #13	HDAC9 (ENSGEVG00005012001) #15	TWIST1 (ENSGEVG00005012530)	FERD3L (ENSGEVG00005012548)	POLR1F (ENSGEVG00005012571) #18	ENSGEVG00005012707	ENSGEVG00005012739	MACC1 (ENSGEVG00005012771) #20	ITGB8 (ENSGEVG00005012960) #21	ENSGEVG00005013142	ENSGEVG00005013240	ABCB5 (ENSGEVG00005014091) #22	SP8 (ENSGEVG00005014907) #23	SP4 (ENSGEVG00005014942) #25	DNAH11 (ENSGEVG00005015389) #27	CDCA7L (ENSGEVG00005017998) #29	RAPGEF5 (ENSGEVG00005018050) #30	IL6 (ENSGEVG00005018173) #31	TOMM7 (ENSGEVG00005018229) #32	ENSGEVG00005018258	HYCC1 (ENSGEVG00005018341) #33	KLHL7 (ENSGEVG00005018379) #35	NUP42 (ENSGEVG00005018404) #37	GPNMB (ENSGEVG00005018458)	IGF2BP3 (ENSGEVG00005018574)	ENSGEVG00005018698	ENSGEVG00005018708
Emydidae	ANCESTRAL SPECIES	34	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00940000176107	ENSGT00940000163002 #19	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000155287	ENSGT00940000161340 #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT00940000164650	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00390000000118 #37	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167
Three-toed box turtle	MODERN SPECIES	30	ANKMY2 (ENSTMTG00000004634)	BZW2 (ENSTMTG00000004461) #7	TSPAN13 (ENSTMTG00000004427) #8	AGR2 (ENSTMTG00000004394) #9	AGR3 (ENSTMTG00000004366) #10	AHR (ENSTMTG00000004344) #11	SNX13 (ENSTMTG00000004244) #13	HDAC9 (ENSTMTG00000003728) #15	FERD3L (ENSTMTG00000003656)	POLR1F (ENSTMTG00000003642) #18	ENSTMTG00000003626	ENSTMTG00000003612	MACC1 (ENSTMTG00000003541) #20	ITGB8 (ENSTMTG00000003419) #21	ENSTMTG00000003044	ABCB5 (ENSTMTG00000002813) #22	SP8 (ENSTMTG00000002773) #23	SP4 (ENSTMTG00000002767) #25	DNAH11 (ENSTMTG00000001073) #27	ENSTMTG00000000457	CDCA7L (ENSTMTG00000000428) #29	RAPGEF5 (ENSTMTG00000000391) #30	ENSTMTG00000000340 #30	IL6 (ENSTMTG00000000298) #31	ENSTMTG00000000184	HYCC1 (ENSTMTG00000000129) #33	KLHL7 (ENSTMTG00000000092) #35	NUP42 (ENSTMTG00000000062) #37	GPNMB (ENSTMTG00000005155)	MALSU1 (ENSTMTG00000005100)	ENSTMTG00000005082
painted turtle	MODERN SPECIES	7	AKAP9 (ENSCPBG00000021625)	MTERF1 (ENSCPBG00000021801)	DGKB (ENSCPBG00000021818)	AGMO (ENSCPBG00000021836)	MEOX2 (ENSCPBG00000021846)	CRPPA (ENSCPBG00000021851)	SOSTDC1 (ENSCPBG00000021856)	ENSCPBG00000021861	ANKMY2 (ENSCPBG00000021864)	BZW2 (ENSCPBG00000021873) #7	TSPAN13 (ENSCPBG00000021878) #8	AGR2 (ENSCPBG00000021880) #9	AGR3 (ENSCPBG00000021881) #10	AHR (ENSCPBG00000021882) #11	SNX13 (ENSCPBG00000021888) #13	ABCB5 (ENSCPBG00000021908) #22	SP8 (ENSCPBG00000021953) #23	SP4 (ENSCPBG00000021957) #25	DNAH11 (ENSCPBG00000022143) #27	CDCA7L (ENSCPBG00000022440) #29	ENSCPBG00000022443	RAPGEF5 (ENSCPBG00000022447) #30	IL6 (ENSCPBG00000022451) #31	TOMM7 (ENSCPBG00000022452) #32	ENSCPBG00000022454	HYCC1 (ENSCPBG00000022456) #33	ENSCPBG00000022458	KLHL7 (ENSCPBG00000022459) #35	NUP42 (ENSCPBG00000022460) #37	GPNMB (ENSCPBG00000022462)	MALSU1 (ENSCPBG00000022463)
Chinese turtle	MODERN SPECIES	2225	ANKMY2 (ENSPSIG00000008255)	BZW2 (ENSPSIG00000008748) #7	TSPAN13 (ENSPSIG00000009127) #8	AGR2 (ENSPSIG00000009717) #9	AGR3 (ENSPSIG00000009745) #10	AHR (ENSPSIG00000010051) #11	SNX13 (ENSPSIG00000010516) #13	HDAC9 (ENSPSIG00000011707) #15	FERD3L (ENSPSIG00000000691)	POLR1F (ENSPSIG00000004395) #18	TMEM196 (ENSPSIG00000004454) #19	MACC1 (ENSPSIG00000004544) #20	ITGB8 (ENSPSIG00000004844) #21	ENSPSIG00000000705	ENSPSIG00000005884	ABCB5 (ENSPSIG00000005929) #22	SP4 (ENSPSIG00000009131) #25	ENSPSIG00000009872 #27	ENSPSIG00000009884 #27	CDCA7L (ENSPSIG00000007953) #29	RAPGEF5 (ENSPSIG00000008835) #30	IL6 (ENSPSIG00000009973) #31	ENSPSIG00000010835	ENSPSIG00000010849	HYCC1 (ENSPSIG00000011903) #33	KLHL7 (ENSPSIG00000012005) #35	NUP42 (ENSPSIG00000013521) #37	GPNMB (ENSPSIG00000013710)	MALSU1 (ENSPSIG00000014119)	IGF2BP3 (ENSPSIG00000014154)	TRA2A (ENSPSIG00000014993)
Archosauria	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Aves	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Neognathae	ANCESTRAL SPECIES																	ENSGT00940000161340 #22
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000164984	ENSGT00400000022250	ENSGT00940000155589	ENSGT00390000015769.A	ENSGT00390000014274	ENSGT00390000008042.A.a.a	ENSGT00390000008042.A.a.b	ENSGT00940000160479	ENSGT00390000008042.B	ENSGT00940000153979.B	ENSGT00940000156889	ENSGT00530000063909.b	ENSGT00940000160249	ENSGT00940000159175	ENSGT00940000159418.g.a	ENSGT00940000161340 #22	ENSGT00940000159418.g.b	ENSGT01060000248556.C	ENSGT00390000015518	ENSGT00940000161184	ENSGT00390000007526	ENSGT00390000017837.b	ENSGT00950000183184.a.b	ENSGT00940000156737	ENSGT00940000155958	ENSGT00960000189558	ENSGT00390000006960	ENSGT00940000161639	ENSGT00940000158676	ENSGT00940000155299.A	ENSGT00390000016416
Anatidae	ANCESTRAL SPECIES	1	ENSGT00940000164984	ENSGT00400000022250	ENSGT00940000155589	ENSGT00390000015769.A	ENSGT00390000014274	ENSGT00390000008042.A.a.a	ENSGT00390000008042.A.a.b	ENSGT00940000160479	ENSGT00390000008042.B	ENSGT00940000153979.B	ENSGT00940000156889	ENSGT00530000063909.b	ENSGT00940000160249	ENSGT00940000159175	ENSGT00940000159418.g.a	ENSGT00940000161340 #22	ENSGT00940000159418.g.b	ENSGT01060000248556.C	ENSGT00390000015518	ENSGT00940000161184	ENSGT00390000007526	ENSGT00390000017837.b	ENSGT00950000183184.a.b	ENSGT00940000156737	ENSGT00940000155958	ENSGT00390000006960	ENSGT00940000161639	ENSGT00940000158676	ENSGT00940000155299.A	ENSGT00390000016416	ENSGT00940000156146
Pink-footed goose	MODERN SPECIES		ENSABRG00000015964	CLDN12 (ENSABRG00000015979)	GTPBP10 (ENSABRG00000016020)	FAM237B (ENSABRG00000016030)	CFAP69 (ENSABRG00000016042)	STEAP2 (ENSABRG00000016073)	ENSABRG00000016096	ZNF804B (ENSABRG00000016122)	STEAP4 (ENSABRG00000016138)	SRI (ENSABRG00000016151)	ADAM22 (ENSABRG00000016159)	DBF4 (ENSABRG00000016192)	SLC25A40 (ENSABRG00000016201)	RUNDC3B (ENSABRG00000016212)	ENSABRG00000016219	ENSABRG00000016227 #22	ENSABRG00000016263	CROT (ENSABRG00000016278)	OLAH (ENSABRG00000016301)	ACBD7 (ENSABRG00000016308)	ENSABRG00000016322	ENSABRG00000016338	NMT2 (ENSABRG00000016361)	FAM171A1 (ENSABRG00000016400)	ITGA8 (ENSABRG00000016452)	MINDY3 (ENSABRG00000016496)	PTER (ENSABRG00000016529)	C1QL3 (ENSABRG00000016535)	RSU1 (ENSABRG00000016562)	CUBN (ENSABRG00000016722)	TRDMT1 (ENSABRG00000017192)
Australian saltwater crocodile	DUPLICATION
Australian saltwater crocodile	MODERN SPECIES		ENSCPRG00005012471	CLDN12 (ENSCPRG00005012468)	GTPBP10 (ENSCPRG00005012462)	FAM237B (ENSCPRG00005012457)	CFAP69 (ENSCPRG00005012425)	STEAP2 (ENSCPRG00005012410)	ENSCPRG00005012369	ZNF804B (ENSCPRG00005012300)	STEAP4 (ENSCPRG00005012256)	SRI (ENSCPRG00005012233)	ADAM22 (ENSCPRG00005012213)	DBF4 (ENSCPRG00005012163)	SLC25A40 (ENSCPRG00005012157)	RUNDC3B (ENSCPRG00005012142)	ABCB1 (ENSCPRG00005011780)	ENSCPRG00005011704 #22	ABCB4 (ENSCPRG00005011694)	CROT (ENSCPRG00005011686)	OLAH (ENSCPRG00005011683)	ACBD7 (ENSCPRG00005011680)	RPP38 (ENSCPRG00005011674)	NMT2 (ENSCPRG00005011668)	FAM171A1 (ENSCPRG00005011587)	ITGA8 (ENSCPRG00005011517)	MINDY3 (ENSCPRG00005011496)	PTER (ENSCPRG00005011445)	RSU1 (ENSCPRG00005011434)	CUBN (ENSCPRG00005011254)	TRDMT1 (ENSCPRG00005011237)	VIM (ENSCPRG00005011234)	ST8SIA6 (ENSCPRG00005011229)
Australian saltwater crocodile	MODERN SPECIES		BZW2 (ENSCPRG00005015204) #7	TSPAN13 (ENSCPRG00005015218) #8	AGR2 (ENSCPRG00005015225) #9	AGR3 (ENSCPRG00005015251) #10	AHR (ENSCPRG00005015276) #11	SNX13 (ENSCPRG00005015318) #13	ENSCPRG00005015321 #15	ENSCPRG00005015331 #15	TWIST1 (ENSCPRG00005015335)	FERD3L (ENSCPRG00005015338)	POLR1F (ENSCPRG00005015351) #18	ENSCPRG00005015353	MACC1 (ENSCPRG00005015373) #20	ITGB8 (ENSCPRG00005015376) #21	ENSCPRG00005015412	ABCB5 (ENSCPRG00005015506) #22	SP4 (ENSCPRG00005015532) #25	DNAH11 (ENSCPRG00005015597) #27	CDCA7L (ENSCPRG00005015926) #29	RAPGEF5 (ENSCPRG00005015927) #30	IL6 (ENSCPRG00005015943) #31	TOMM7 (ENSCPRG00005015944) #32	HYCC1 (ENSCPRG00005015946) #33	KLHL7 (ENSCPRG00005015951) #35	IGF2BP3 (ENSCPRG00005015954)	NUP42 (ENSCPRG00005015964) #37	GPNMB (ENSCPRG00005015967)	MALSU1 (ENSCPRG00005015969)	ENSCPRG00005015973	ENSCPRG00005015974	CCDC126 (ENSCPRG00005015975)
Anura	DUPLICATION
Anura	DUPLICATION
Anura	ANCESTRAL SPECIES	12	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000163428.b.a	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340.b #22	ENSGT00940000161340.a.a #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT01060000248729	ENSGT00940000164650.c	ENSGT00940000164650.d	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B
Frog	MODERN SPECIES	6	agr3 (ENSXETG00000022793) #10	ahr (ENSXETG00000022784) #11	snx13 (ENSXETG00000022783) #13	hdac9 (ENSXETG00000013445) #15	ENSXETG00000047590	twist1 (ENSXETG00000025630)	ferd3l (ENSXETG00000031751)	polr1f (ENSXETG00000013443) #18	ENSXETG00000044065	tmem196 (ENSXETG00000032855)	ENSXETG00000042991	macc1 (ENSXETG00000013440) #20	ENSXETG00000042905	itgb8 (ENSXETG00000013431) #21	XB950724 [provisional:abcb1] (ENSXETG00000023590) #22	abcb5 (ENSXETG00000043940) #22	sp8 (ENSXETG00000040083) #23	ENSXETG00000040315	ENSXETG00000045520	sp4 (ENSXETG00000007429) #25	dnah11 (ENSXETG00000007412) #27	cdca7l (ENSXETG00000007411) #29	rapgef5 (ENSXETG00000007409) #30	ENSXETG00000046488	il6 (ENSXETG00000049395) #31	tomm7 (ENSXETG00000042882) #32	ENSXETG00000043090	ENSXETG00000005941	ENSXETG00000044112	fam126a (ENSXETG00000005936) #33	sirt6 (ENSXETG00000027525)
Leishan spiny toad	MODERN SPECIES	8	AGR3 (ENSLLEG00000016975) #10	ENSLLEG00000017077	AHR (ENSLLEG00000017103) #11	SNX13 (ENSLLEG00000017251) #13	ENSLLEG00000017827	HDAC9 (ENSLLEG00000017886) #15	ENSLLEG00000018324	FERD3L (ENSLLEG00000018341)	POLR1F (ENSLLEG00000018384) #18	ENSLLEG00000018447	MACC1 (ENSLLEG00000018585) #20	ENSLLEG00000018641	ITGB8 (ENSLLEG00000018670) #21	ENSLLEG00000018853	ENSLLEG00000018911 #22	ENSLLEG00000019398 #22	ENSLLEG00000019932	SP8 (ENSLLEG00000019954) #23	ENSLLEG00000019992	ENSLLEG00000020011	ENSLLEG00000020041	SP4 (ENSLLEG00000020085) #25	DNAH11 (ENSLLEG00000020467) #27	CDCA7L (ENSLLEG00000023490) #29	ENSLLEG00000023652	RAPGEF5 (ENSLLEG00000023707) #30	IL6 (ENSLLEG00000005269) #31	ENSLLEG00000005291	ENSLLEG00000005305	ENSLLEG00000005350	ENSLLEG00000005356
Anura	ANCESTRAL SPECIES																	ENSGT00940000161340.a.b #22
Leishan spiny toad	MODERN SPECIES	8	AGR2 (ENSLLEG00000016875) #9	AGR3 (ENSLLEG00000016975) #10	ENSLLEG00000017077	AHR (ENSLLEG00000017103) #11	SNX13 (ENSLLEG00000017251) #13	ENSLLEG00000017827	HDAC9 (ENSLLEG00000017886) #15	ENSLLEG00000018324	FERD3L (ENSLLEG00000018341)	POLR1F (ENSLLEG00000018384) #18	ENSLLEG00000018447	MACC1 (ENSLLEG00000018585) #20	ENSLLEG00000018641	ITGB8 (ENSLLEG00000018670) #21	ENSLLEG00000018853	ENSLLEG00000018911 #22	ENSLLEG00000019398 #22	ENSLLEG00000019932	SP8 (ENSLLEG00000019954) #23	ENSLLEG00000019992	ENSLLEG00000020011	ENSLLEG00000020041	SP4 (ENSLLEG00000020085) #25	DNAH11 (ENSLLEG00000020467) #27	CDCA7L (ENSLLEG00000023490) #29	ENSLLEG00000023652	RAPGEF5 (ENSLLEG00000023707) #30	IL6 (ENSLLEG00000005269) #31	ENSLLEG00000005291	ENSLLEG00000005305	ENSLLEG00000005350
Frog	MODERN SPECIES	5	rd3 (ENSXETG00000045435)	mrpl57 (ENSXETG00000038041)	traf5 (ENSXETG00000014444)	ENSXETG00000043169	bicral (ENSXETG00000031648)	trerf1 (ENSXETG00000000198)	ubr2 (ENSXETG00000000201)	ENSXETG00000037891	prph2 (ENSXETG00000000215)	utp25 (ENSXETG00000000216)	syt14 (ENSXETG00000000217)	sertad4 (ENSXETG00000038324)	hhat (ENSXETG00000000222)	kcnh1 (ENSXETG00000000225)	rcor3 (ENSXETG00000005989)	ENSXETG00000005990 #22	pkdcc.2 (ENSXETG00000047295)	eml4 (ENSXETG00000006002)	ENSXETG00000046067	ENSXETG00000049350	cox7a2l (ENSXETG00000034814)	ENSXETG00000044916	kcng3 (ENSXETG00000040880)	ENSXETG00000046056	haao (ENSXETG00000046490)	ENSXETG00000044648	ENSXETG00000047043	ENSXETG00000043328	zfp36l2 (ENSXETG00000009274)	thada (ENSXETG00000009275)	plekhh2 (ENSXETG00000009282)
Anura	ANCESTRAL SPECIES	12	ENSGT00940000165642	ENSGT00390000016820	ENSGT00390000012561.a #7	ENSGT00940000157010 #8	ENSGT00530000063273.b.a.b.a.b #9	ENSGT00530000063273.b.a.b.a.a #10	ENSGT00940000154486.b.a.b #11	ENSGT00950000182856.a.a.a #13	ENSGT00940000160307 #15	ENSGT00940000163428.b.a	ENSGT00940000161409	ENSGT00390000005553 #18	ENSGT00940000163281	ENSGT00390000013151.a.b #20	ENSGT01090000259987.b.a #21	ENSGT00940000161340.b #22	ENSGT00940000161340.a.a #22	ENSGT00940000162033.a.a #23	ENSGT00940000157827 #25	ENSGT00940000158880 #27	ENSGT00940000159108 #29	ENSGT00940000155137 #30	ENSGT00390000000878 #31	ENSGT00390000014833 #32	ENSGT01060000248729	ENSGT00940000164650.c	ENSGT00940000164650.d	ENSGT00390000011295.b #33	ENSGT00940000155602 #35	ENSGT00950000183188.B	ENSGT00390000015035
Frog	MODERN SPECIES	6	agr2 (ENSXETG00000025625) #9	agr3 (ENSXETG00000022793) #10	ahr (ENSXETG00000022784) #11	snx13 (ENSXETG00000022783) #13	hdac9 (ENSXETG00000013445) #15	ENSXETG00000047590	twist1 (ENSXETG00000025630)	ferd3l (ENSXETG00000031751)	polr1f (ENSXETG00000013443) #18	ENSXETG00000044065	tmem196 (ENSXETG00000032855)	ENSXETG00000042991	macc1 (ENSXETG00000013440) #20	ENSXETG00000042905	itgb8 (ENSXETG00000013431) #21	XB950724 [provisional:abcb1] (ENSXETG00000023590) #22	abcb5 (ENSXETG00000043940) #22	sp8 (ENSXETG00000040083) #23	ENSXETG00000040315	ENSXETG00000045520	sp4 (ENSXETG00000007429) #25	dnah11 (ENSXETG00000007412) #27	cdca7l (ENSXETG00000007411) #29	rapgef5 (ENSXETG00000007409) #30	ENSXETG00000046488	il6 (ENSXETG00000049395) #31	tomm7 (ENSXETG00000042882) #32	ENSXETG00000043090	ENSXETG00000005941	ENSXETG00000044112	fam126a (ENSXETG00000005936) #33
Coelacanth	MODERN SPECIES	2271																ABCB5 (ENSLACG00000002040) #22	SP8 (ENSLACG00000005288) #23