Eutheria	ANCESTRAL SPECIES	1	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b #25	ENSGT00940000162509 #26	ENSGT00940000154460.a	ENSGT00940000164102	ENSGT00940000155819.d	ENSGT00940000163545.a	ENSGT00530000064313.b	ENSGT00940000155819.c.b	ENSGT00940000162480.b	ENSGT00940000163595.c.a.b	ENSGT00940000154542.b #29	ENSGT00940000154270.b ##27
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000164371
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000164371
Primates	ANCESTRAL SPECIES	12	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000154270.a.b #27	ENSGT00940000154460.b	ENSGT00940000154542.b.a ##29	ENSGT00940000162509 #26	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.b #29	ENSGT00940000164371
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000162509 #26	ENSGT00940000154542.a.a ##29	ENSGT00940000163595.c.a.b	ENSGT00940000163595.c.a.a	ENSGT01050000244883.A.a.a.a.a.d ##25	ENSGT00730000111153	ENSGT00440000034680	ENSGT00940000160399.d	ENSGT00940000156687.g
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.m #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000162509 #26	ENSGT00940000154270.a.b #27	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.b #29	ENSGT00940000164371	ENSGT00940000162707.m	ENSGT00940000164102	ENSGT00940000154460.a	ENSGT00940000163545.a	ENSGT00940000154542.a.a ##29
Lemuriformes_a	ANCESTRAL SPECIES	51	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.m #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000162509 #26	ENSGT00940000154270.a.b #27	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.b #29	ENSGT00940000164371	ENSGT00940000162707.m	ENSGT00940000164102	ENSGT00940000154460.a	ENSGT00940000163545.a	ENSGT00940000154542.a.a ##29	ENSGT00940000163595.c.a.b
Greater bamboo lemur	MODERN SPECIES	70	ENSPSMG00000005632 #7	ENSPSMG00000005629 #8	TMEM178B (ENSPSMG00000005625) #9	AGK (ENSPSMG00000005473) #10	DENND11 (ENSPSMG00000005424) #11	WEE2 (ENSPSMG00000005416) #12	SSBP1 (ENSPSMG00000005385) #13	TAS2R3 (ENSPSMG00000005351) #14	TAS2R4 (ENSPSMG00000005349) #15	PRSS37 (ENSPSMG00000005348) #16	OR9A1P (ENSPSMG00000005343) #17	OR9A4 (ENSPSMG00000005339) #18	CLEC5A (ENSPSMG00000005337) #19	TAS2R38 (ENSPSMG00000005320) #20	ENSPSMG00000005316 #21	MGAM (ENSPSMG00000005298) #22	PRSS58 (ENSPSMG00000005244) #23	ENSPSMG00000005238 #24	ENSPSMG00000005226 #25	ENSPSMG00000005215 #26	ENSPSMG00000005211 #27	TRBV9 (ENSPSMG00000005204) #28	ENSPSMG00000005203 #29
Coquerels sifaka	MODERN SPECIES	430	ENSPCOG00000002890	ENSPCOG00000023686	DENND2A (ENSPCOG00000012423)	ADCK2 (ENSPCOG00000019938)	ENSPCOG00000018417	NDUFB2 (ENSPCOG00000008454)	BRAF (ENSPCOG00000024467)	ENSPCOG00000015683 #7	TMEM178B (ENSPCOG00000020472) #9	AGK (ENSPCOG00000025807) #10	DENND11 (ENSPCOG00000005094) #11	WEE2 (ENSPCOG00000016620) #12	SSBP1 (ENSPCOG00000021009) #13	PRSS37 (ENSPCOG00000020043) #16	ENSPCOG00000027867 #19	MGAM (ENSPCOG00000014465) #22
Mouse lemur	MODERN SPECIES	2	ENSMICG00000005092	BRAF (ENSMICG00000005096)	MRPS33 (ENSMICG00000029049) #7	ENSMICG00000028298	ENSMICG00000036507	TMEM178B (ENSMICG00000027101) #9	ENSMICG00000002561 #10	DENND11 (ENSMICG00000002570) #11	WEE2 (ENSMICG00000045942) #12	ENSMICG00000031317 #13	TAS2R5 (ENSMICG00000002588) ##14	PRSS37 (ENSMICG00000043681) #16	OR9A1P (ENSMICG00000047958) #17	CLEC5A (ENSMICG00000001118) #19	ENSMICG00000027436	MGAM (ENSMICG00000001123) #22	ENSMICG00000027181 #21	ENSMICG00000001140	PRSS58 (ENSMICG00000043863) #23	ENSMICG00000028481 #25	ENSMICG00000026754	TRBV15 (ENSMICG00000030792)	ENSMICG00000007358 ##25	ENSMICG00000047513	ENSMICG00000027701	EPHB6 (ENSMICG00000007364)	TRPV6 (ENSMICG00000007378)	LLCFC1 (ENSMICG00000007407)	KEL (ENSMICG00000007416)	PIP (ENSMICG00000007453)	GSTK1 (ENSMICG00000015493)
Bushbaby	MODERN SPECIES	164	ADCK2 (ENSOGAG00000009639)	NDUFB2 (ENSOGAG00000009644)	BRAF (ENSOGAG00000009646)	MRPS33 (ENSOGAG00000017200) #7	ENSOGAG00000027045 #9	AGK (ENSOGAG00000016647) #10	DENND11 (ENSOGAG00000016654) #11	ENSOGAG00000032705 #12	SSBP1 (ENSOGAG00000016661) #13	TAS2R3 (ENSOGAG00000034844) #14	PRSS37 (ENSOGAG00000016666) #16	OR9A1P (ENSOGAG00000025142) #17	OR9A4 (ENSOGAG00000029429) #18	CLEC5A (ENSOGAG00000011563) #19	TAS2R38 (ENSOGAG00000011567) #20	MGAM (ENSOGAG00000026892) #22	ENSOGAG00000032017 #21	ENSOGAG00000011568	ENSOGAG00000011575	PRSS58 (ENSOGAG00000011579) #23	ENSOGAG00000029218 #24	ENSOGAG00000029366 #25	ENSOGAG00000027692 #26	ENSOGAG00000024305 #26	ENSOGAG00000028414	ENSOGAG00000031442	ENSOGAG00000033458	ENSOGAG00000027688 ##29	ENSOGAG00000032057	ENSOGAG00000013520 #27	ENSOGAG00000031259 #29
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.b #29	ENSGT00940000164371	ENSGT00940000162707.m
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000162509.f #26	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.a #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.b.e.a #27	ENSGT00940000154460.b.f	ENSGT00940000154270.a.b.f #27	ENSGT00940000154542.b.b.l #29
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000162509.f #26	ENSGT00940000164097	ENSGT00940000162509.e.a #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154460.b.e.a.a	ENSGT00940000154270.a.b.e.a.a.a.a #27	ENSGT00940000154542.b.a.k.a.a.a.a ##29	ENSGT00940000154460.b.f.a.b	ENSGT00940000154270.a.b.e.a.a.a.b.b #27	ENSGT00940000154542.b.a.k.a.a.a.b ##29	ENSGT00940000154270.a.b.e.a.a.b #27
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000164097.f.b	ENSGT00940000162509.e.a #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154542.b.a.k.b ##29	ENSGT00940000154460.b.e.b	ENSGT00940000164097.f.a	ENSGT00940000162509.e.b #26	ENSGT00940000154460.b.e.a.a	ENSGT00940000154542.b.a.l ##29	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.b.e.a.b #27	ENSGT00940000154270.a.a #28
Hominidae	ANCESTRAL SPECIES	11	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000164097.f.b	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.a #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154542.b.a.k.b.d ##29	ENSGT00940000154460.b.e.b	ENSGT00940000162509.e.b #26	ENSGT00940000154542.b.a.k.b.c ##29	ENSGT00940000154460.b.e.a.a	ENSGT00940000154542.b.a.l ##29
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.a #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154542.b.a.k.b.d ##29	ENSGT00940000154460.b.e.b	ENSGT00940000162509.e.b #26	ENSGT00940000154542.b.a.k.b.c ##29	ENSGT00940000154460.b.e.a.a	ENSGT00940000154542.b.a.l ##29	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.b.e.a.b #27
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.a #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154542.b.a.k.b.d ##29	ENSGT00940000154460.b.e.b	ENSGT00940000162509.e.b #26	ENSGT00940000154542.b.a.k.b.c ##29	ENSGT00940000154460.b.e.a.a	ENSGT00940000154542.b.a.l ##29	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.b.e.a.b #27	ENSGT00940000154270.a.a #28
Pan	ANCESTRAL SPECIES	13	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.b.a #26	ENSGT00940000162509.e.b.b #26	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.b.k #29	ENSGT00940000164371.a.b	ENSGT00940000154270.a.b.e.a.a.b #27	ENSGT00940000154270.a.b.e.a.a.a.b.a.a.a #27	ENSGT00940000154542.b.a.k.a.a.a.b ##29	ENSGT00940000154270.a.b.e.a.a.a.a #27	ENSGT00940000154460.b.f.b
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	BRAF (ENSPTRG00000019769)	MRPS33 (ENSPTRG00000019773) #7	TMEM178B (ENSPTRG00000047632) #9	AGK (ENSPTRG00000019775) #10	DENND11 (ENSPTRG00000019776) #11	ENSPTRG00000049781	WEE2 (ENSPTRG00000028383) #12	SSBP1 (ENSPTRG00000019778) #13	TAS2R3 (ENSPTRG00000019779) #14	TAS2R4 (ENSPTRG00000040235) #15	TAS2R5 (ENSPTRG00000019780) ##14	PRSS37 (ENSPTRG00000019781) #16	ENSPTRG00000040014 #18	CLEC5A (ENSPTRG00000019784) #19	TAS2R38 (ENSPTRG00000019785) #20	MGAM (ENSPTRG00000019786) #22	ENSPTRG00000028382 #21	PRSS58 (ENSPTRG00000019787) #23	ENSPTRG00000048550	ENSPTRG00000050465	ENSPTRG00000049536 #26	ENSPTRG00000048217 #26	ENSPTRG00000042693 #28	TRBV10-1 (ENSPTRG00000040773) #29	ENSPTRG00000047320	ENSPTRG00000049796 #27	ENSPTRG00000046904 ##29	ENSPTRG00000043148 #27	ENSPTRG00000051455 #27	ENSPTRG00000051902	ENSPTRG00000048165 #27
Chimpanzee	MODERN SPECIES	579	ENSPTRG00000051563	ENSPTRG00000051927 #7	ENSPTRG00000045391 #9	ENSPTRG00000050750 #10	ENSPTRG00000044959	ENSPTRG00000044303 #11	ENSPTRG00000052697 #13	ENSPTRG00000050321 #14	ENSPTRG00000047526 #15	ENSPTRG00000043567 ##14	ENSPTRG00000045859 #16	OR9A1P (ENSPTRG00000043919) #17	ENSPTRG00000047806 #18	ENSPTRG00000044670 #19	TAS2R38 (ENSPTRG00000045865) #20	ENSPTRG00000050880 #22	ENSPTRG00000048454 #21	ENSPTRG00000044453 #23	ENSPTRG00000051456	ENSPTRG00000048222	ENSPTRG00000044775 #26	ENSPTRG00000043817 #26
Bonobo	MODERN SPECIES	20	NDUFB2 (ENSPPAG00000039747)	BRAF (ENSPPAG00000036004)	MRPS33 (ENSPPAG00000043201) #7	TMEM178B (ENSPPAG00000002445) #9	AGK (ENSPPAG00000041636) #10	ENSPPAG00000029884	ENSPPAG00000043213 #11	WEE2 (ENSPPAG00000021161) #12	SSBP1 (ENSPPAG00000035223) #13	TAS2R3 (ENSPPAG00000006982) #14	TAS2R4 (ENSPPAG00000007093) #15	TAS2R5 (ENSPPAG00000009772) ##14	PRSS37 (ENSPPAG00000033068) #16	CLEC5A (ENSPPAG00000037590) #19	TAS2R38 (ENSPPAG00000019525) #20	MGAM (ENSPPAG00000026007) #22	MGAM2 (ENSPPAG00000034149) #21	PRSS58 (ENSPPAG00000042862) #23	ENSPPAG00000026493	ENSPPAG00000025154	ENSPPAG00000000478 #26	ENSPPAG00000025019 #26	TRBV7-3 (ENSPPAG00000000508)	ENSPPAG00000009837 #28	TRBV10-1 (ENSPPAG00000026354) #29	ENSPPAG00000043441	ENSPPAG00000043752	TRBV5-4 (ENSPPAG00000012592) #27	ENSPPAG00000020403 #27	ENSPPAG00000024438 ##29	ENSPPAG00000025667 #27
Human	MODERN SPECIES	19	DENND2A (ENSG00000146966)	ADCK2 (ENSG00000133597)	NDUFB2 (ENSG00000090266)	BRAF (ENSG00000157764)	MRPS33 (ENSG00000090263) #7	TMEM178B (ENSG00000261115) #9	AGK (ENSG00000006530) #10	DENND11 (ENSG00000257093) #11	WEE2 (ENSG00000214102) #12	SSBP1 (ENSG00000106028) #13	TAS2R3 (ENSG00000127362) #14	TAS2R4 (ENSG00000127364) #15	TAS2R5 (ENSG00000127366) ##14	PRSS37 (ENSG00000165076) #16	OR9A1P (ENSG00000237621) #17	MGAM (ENSG00000257335) #22	OR9A4 (ENSG00000258083) #18	CLEC5A (ENSG00000258227) #19	TAS2R38 (ENSG00000257138) #20	MGAM2 (ENSG00000257743) #21	PRSS58 (ENSG00000258223) #23	TRBV2 (ENSG00000226660)	TRBV3-1 (ENSG00000237702)	TRBV4-1 (ENSG00000211710) #26	TRBV5-1 (ENSG00000211734) #27	TRBV6-1 (ENSG00000211706) ##29	TRBV7-1 (ENSG00000211707)	TRBV4-2 (ENSG00000211745) #26	TRBV6-2 (ENSG00000283063) ##29	TRBV7-2 (ENSG00000282939)	TRBV6-4 (ENSG00000211713) ##29
Gorilla	MODERN SPECIES	20	BRAF (ENSGGOG00000017089)	MRPS33 (ENSGGOG00000009563) #7	TMEM178B (ENSGGOG00000025163) #9	AGK (ENSGGOG00000008821) #10	ENSGGOG00000037770	DENND11 (ENSGGOG00000008828) #11	WEE2 (ENSGGOG00000009609) #12	SSBP1 (ENSGGOG00000009615) #13	TAS2R3 (ENSGGOG00000009618) #14	TAS2R4 (ENSGGOG00000023731) #15	TAS2R5 (ENSGGOG00000009622) ##14	PRSS37 (ENSGGOG00000010592) #16	OR9A4 (ENSGGOG00000006400) #18	CLEC5A (ENSGGOG00000006401) #19	TAS2R38 (ENSGGOG00000000269) #20	MGAM (ENSGGOG00000003832) #22	MGAM2 (ENSGGOG00000010479) #21	PRSS58 (ENSGGOG00000008370) #23	ENSGGOG00000038309 #25	ENSGGOG00000042183	ENSGGOG00000043553	TRBV4-2 (ENSGGOG00000026368) #26	TRBV7-3 (ENSGGOG00000006487)	TRBV9 (ENSGGOG00000036398) #28	ENSGGOG00000024075 #29	ENSGGOG00000042430	ENSGGOG00000043155 #27	ENSGGOG00000038962 #27	ENSGGOG00000041087 #27	ENSGGOG00000026381	ENSGGOG00000040884 #27
Orangutan	MODERN SPECIES	20	DENND2A (ENSPPYG00000018058)	ADCK2 (ENSPPYG00000018059)	NDUFB2 (ENSPPYG00000018060)	BRAF (ENSPPYG00000018061)	MRPS33 (ENSPPYG00000036255) #7	TMEM178B (ENSPPYG00000029744) #9	AGK (ENSPPYG00000018064) #10	DENND11 (ENSPPYG00000033394) #11	WEE2 (ENSPPYG00000018066) #12	SSBP1 (ENSPPYG00000018068) #13	TAS2R3 (ENSPPYG00000018069) #14	TAS2R4 (ENSPPYG00000035803) #15	TAS2R5 (ENSPPYG00000018267) ##14	PRSS37 (ENSPPYG00000018071) #16	CLEC5A (ENSPPYG00000018072) #19	ENSPPYG00000018074 #22	MGAM2 (ENSPPYG00000018075) #21	PRSS58 (ENSPPYG00000018076) #23	ENSPPYG00000040295 #24	ENSPPYG00000030426	ENSPPYG00000038450 #26	ENSPPYG00000030363	ENSPPYG00000037063	ENSPPYG00000037561	ENSPPYG00000038711 #27	ENSPPYG00000018142	ENSPPYG00000035555 ##29	ENSPPYG00000018080 #26	ENSPPYG00000018082	TRBV7-3 (ENSPPYG00000040004)	TRBV9 (ENSPPYG00000039736) #28
Gibbon	MODERN SPECIES	3	ADCK2 (ENSNLEG00000002068)	NDUFB2 (ENSNLEG00000035760)	BRAF (ENSNLEG00000002139)	MRPS33 (ENSNLEG00000002278) #7	TMEM178B (ENSNLEG00000029749) #9	AGK (ENSNLEG00000002291) #10	ENSNLEG00000027915	DENND11 (ENSNLEG00000030404) #11	WEE2 (ENSNLEG00000002356) #12	SSBP1 (ENSNLEG00000002361) #13	TAS2R3 (ENSNLEG00000018419) #14	PRSS37 (ENSNLEG00000002371) #16	OR9A4 (ENSNLEG00000002393) #18	CLEC5A (ENSNLEG00000002394) #19	TAS2R38 (ENSNLEG00000018421) #20	MGAM (ENSNLEG00000002429) #22	MGAM2 (ENSNLEG00000002615) #21	PRSS58 (ENSNLEG00000002623) #23	ENSNLEG00000028355 #25	ENSNLEG00000035493	ENSNLEG00000035397	ENSNLEG00000032489	ENSNLEG00000031773	ENSNLEG00000034334	ENSNLEG00000034777	ENSNLEG00000026761 #28	ENSNLEG00000032800 #29	ENSNLEG00000032866 #27	ENSNLEG00000034879 #27	ENSNLEG00000036018 #27	TRBV11-3 (ENSNLEG00000029071)
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000156154.a	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000162509.f #26	ENSGT00940000154460.a.r.a	ENSGT00940000164097	ENSGT00940000162509.e.b #26	ENSGT00940000154460.b.e.a.a	ENSGT00940000154270.a.b.e.a.a.a.a.a #27	ENSGT00940000154460.b.f.a.a.a	ENSGT00940000154270.a.b.e.a.a.a.a.b #27	ENSGT00940000154542.b.a.k.a.a.a.a.a ##29	ENSGT00940000154460.b.f.a.b	ENSGT00940000154270.a.b.e.a.a.a.b.b #27
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000156154.a	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000162509.f #26	ENSGT00940000154460.a.r.a.b	ENSGT00940000164097	ENSGT00940000162509.e.a #26	ENSGT00940000154460.a.r.a.a	ENSGT00940000154460.a.r.b	ENSGT00940000154542.b.a.k.b.b ##29	ENSGT00940000162509.e.b #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154542.b.a.k.b.a ##29	ENSGT00940000154460.b.e.a.a
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00390000011401.k.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000162509.f #26	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000164097	ENSGT00940000162509.e.a.e #26	ENSGT00940000154460.a.r.a.a	ENSGT00940000154460.a.r.b	ENSGT00940000154542.b.a.k.b.b ##29	ENSGT00940000162509.e.b #26	ENSGT00940000162509.e.a.f #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154460.b.e.a.a	ENSGT00940000154460.b.e.a.b
Macaca	ANCESTRAL SPECIES	3	ENSGT00390000011401.k.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000162509.f #26	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000162509.e.a.e #26	ENSGT00940000154460.a.r.a.a	ENSGT00940000164097	ENSGT00940000162509.e.b #26	ENSGT00940000154460.b.e.a.a	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.b.k #29	ENSGT00940000164371.a.a	ENSGT00940000154542.b.a.k.a.b ##29
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00940000156154.a	ENSGT00390000011401.k.b #7	ENSGT00390000011401.k.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000162509.f #26	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000162509.e.a.e #26	ENSGT00940000154460.a.r.a.a	ENSGT00940000164097	ENSGT00940000162509.e.b #26	ENSGT00940000154460.b.e.a.a	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.b.k #29	ENSGT00940000164371.a.a	ENSGT00940000154542.b.a.k.a.b ##29
Rhesus	MODERN SPECIES	13	NDUFB2 (ENSMMUG00000015284)	BRAF (ENSMMUG00000042793)	MRPS33 (ENSMMUG00000050535) #7	TMEM178B (ENSMMUG00000041051) #9	AGK (ENSMMUG00000021017) #10	DENND11 (ENSMMUG00000039865) #11	WEE2 (ENSMMUG00000044167) #12	SSBP1 (ENSMMUG00000022442) #13	TAS2R3 (ENSMMUG00000059165) #14	TAS2R4 (ENSMMUG00000022439) #15	TAS2R5 (ENSMMUG00000056110) ##14	PRSS37 (ENSMMUG00000053855) #16	OR9A4 (ENSMMUG00000042443) #18	CLEC5A (ENSMMUG00000016271) #19	TAS2R38 (ENSMMUG00000055710) #20	MGAM (ENSMMUG00000016273) #22	MGAM2 (ENSMMUG00000019937) #21	PRSS58 (ENSMMUG00000005931) #23	ENSMMUG00000039273 #24	ENSMMUG00000060990 #26	ENSMMUG00000061142	ENSMMUG00000020332 #26	ENSMMUG00000060238	ENSMMUG00000049629	ENSMMUG00000063185 #26	TRBV5-1 (ENSMMUG00000052248) #27	TRBV6-1 (ENSMMUG00000045349) ##29	ENSMMUG00000062085 #26	ENSMMUG00000056515 ##29	TRBV7-2 (ENSMMUG00000049575)	TRBV7-3 (ENSMMUG00000059654)
Crab-eating macaque	MODERN SPECIES	13	BRAF (ENSMFAG00000001069)	ENSMFAG00000057380	MRPS33 (ENSMFAG00000032116) #7	TMEM178B (ENSMFAG00000043984) #9	AGK (ENSMFAG00000039906) #10	DENND11 (ENSMFAG00000002632) #11	WEE2 (ENSMFAG00000038833) #12	SSBP1 (ENSMFAG00000032819) #13	TAS2R3 (ENSMFAG00000063716) #14	TAS2R4 (ENSMFAG00000061404) #15	TAS2R5 (ENSMFAG00000057048) ##14	PRSS37 (ENSMFAG00000033856) #16	OR9A4 (ENSMFAG00000042777) #18	CLEC5A (ENSMFAG00000036311) #19	TAS2R38 (ENSMFAG00000059261) #20	MGAM (ENSMFAG00000000048) #22	MGAM2 (ENSMFAG00000040766) #21	PRSS58 (ENSMFAG00000040057) #23	ENSMFAG00000039259 #24	ENSMFAG00000065633 #26	ENSMFAG00000059294	ENSMFAG00000048982	ENSMFAG00000055769 #26	ENSMFAG00000058032	ENSMFAG00000061924	ENSMFAG00000056428	ENSMFAG00000059431	TRBV4-2 (ENSMFAG00000054752) #26	TRBV5-1 (ENSMFAG00000050485) #27	TRBV7-2 (ENSMFAG00000059469)	ENSMFAG00000061327 ##29
Pig-tailed macaque	MODERN SPECIES	479	DENND2A (ENSMNEG00000036269)	ADCK2 (ENSMNEG00000031935)	NDUFB2 (ENSMNEG00000044806)	BRAF (ENSMNEG00000024672)	MRPS33 (ENSMNEG00000044224) #7	TMEM178B (ENSMNEG00000028782) #9	AGK (ENSMNEG00000029923) #10	ENSMNEG00000003382	ENSMNEG00000001410	DENND11 (ENSMNEG00000034919) #11	WEE2 (ENSMNEG00000032770) #12	SSBP1 (ENSMNEG00000034892) #13	PRSS37 (ENSMNEG00000045224) #16	CLEC5A (ENSMNEG00000039445) #19	TAS2R38 (ENSMNEG00000003977) #20	MGAM (ENSMNEG00000032400) #22	MGAM2 (ENSMNEG00000040988) #21	PRSS58 (ENSMNEG00000036745) #23	ENSMNEG00000030226 #24	ENSMNEG00000008461	ENSMNEG00000013561	TRBV7-3 (ENSMNEG00000044967)	TRBV9 (ENSMNEG00000017269) #28	TRBV10-1 (ENSMNEG00000010145) #29	ENSMNEG00000037773 ##29	ENSMNEG00000008940 #27	ENSMNEG00000044591	TRBV7-4 (ENSMNEG00000024786)	ENSMNEG00000002801 #27	TRBV5-6 (ENSMNEG00000003766) #27	TRBV10-3 (ENSMNEG00000002528) #29
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00390000011401.k.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000154460.a.r.a.b.a	ENSGT00940000154460.a.r.b	ENSGT00940000154542.b.a.k.b.b ##29	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.a.k.a.b ##29	ENSGT00940000154542.b.b.k #29	ENSGT00940000164371.a.a
Cercopithecinae_d	ANCESTRAL SPECIES	25	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154.a	ENSGT00390000011401.k.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a #10	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT00940000162509.f #26	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000154460.a.r.a.a	ENSGT00940000154460.a.r.a.b.a	ENSGT00940000154460.a.r.b	ENSGT00940000154542.b.a.k.b.b ##29	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.b.k #29	ENSGT00940000164371.a.a	ENSGT00940000154270.a.b.e.a.a.a.a.b #27	ENSGT00940000154654.ab.b	ENSGT00940000154270.a.b.e.a.a.a.b.b.a #27
Drill	MODERN SPECIES	1178	DENND2A (ENSMLEG00000040269)	ADCK2 (ENSMLEG00000038169)	NDUFB2 (ENSMLEG00000034682)	BRAF (ENSMLEG00000041508)	ENSMLEG00000043989 #7	TMEM178B (ENSMLEG00000030888) #9	AGK (ENSMLEG00000043143) #10	ENSMLEG00000011841	ENSMLEG00000029548	DENND11 (ENSMLEG00000035429) #11	WEE2 (ENSMLEG00000023635) #12	SSBP1 (ENSMLEG00000039541) #13	PRSS37 (ENSMLEG00000039528) #16	CLEC5A (ENSMLEG00000014115) #19	TAS2R38 (ENSMLEG00000011241) #20	MGAM (ENSMLEG00000028247) #22
Sooty mangabey	MODERN SPECIES	148	DENND2A (ENSCATG00000035508)	ADCK2 (ENSCATG00000029766)	NDUFB2 (ENSCATG00000022754)	BRAF (ENSCATG00000034341)	MRPS33 (ENSCATG00000026661) #7	TMEM178B (ENSCATG00000044426) #9	AGK (ENSCATG00000043619) #10	ENSCATG00000000122	DENND11 (ENSCATG00000036082) #11	WEE2 (ENSCATG00000007238) #12	SSBP1 (ENSCATG00000035429) #13	PRSS37 (ENSCATG00000040618) #16	OR9A1P (ENSCATG00000018573) #17	CLEC5A (ENSCATG00000040577) #19	TAS2R38 (ENSCATG00000018198) #20	MGAM (ENSCATG00000040266) #22	MGAM2 (ENSCATG00000032547) #21	PRSS58 (ENSCATG00000018483) #23	ENSCATG00000019590 #26	ENSCATG00000018350	ENSCATG00000018560
Vervet Monkey	MODERN SPECIES	13	NDUFB2 (ENSCSAG00000008224)	BRAF (ENSCSAG00000008218)	MRPS33 (ENSCSAG00000008211) #7	ENSCSAG00000008209 #9	ENSCSAG00000008203 #9	AGK (ENSCSAG00000008178) #10	DENND11 (ENSCSAG00000008128) #11	WEE2 (ENSCSAG00000008117) #12	SSBP1 (ENSCSAG00000008102) #13	TAS2R3 (ENSCSAG00000019150) #14	TAS2R4 (ENSCSAG00000019151) #15	TAS2R5 (ENSCSAG00000019152) ##14	PRSS37 (ENSCSAG00000008093) #16	CLEC5A (ENSCSAG00000008078) #19	TAS2R38 (ENSCSAG00000019153) #20	MGAM (ENSCSAG00000008027) #22	ENSCSAG00000007937 #21	ENSCSAG00000007921	PRSS58 (ENSCSAG00000007906) #23	ENSCSAG00000007896 #25	ENSCSAG00000019154	ENSCSAG00000007880	TRBV3-1 (ENSCSAG00000007874)	ENSCSAG00000007869 #26	ENSCSAG00000007867 #26	TRBV5-1 (ENSCSAG00000007864) #27	ENSCSAG00000007859 ##29	ENSCSAG00000007856 ##29	TRBV7-2 (ENSCSAG00000007852)	ENSCSAG00000007845 #27	ENSCSAG00000007839 #28
Rhinopithecus	ANCESTRAL SPECIES	141	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154.a	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961.c.a.c #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a.r.a	ENSGT00940000164097	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.b.k #29	ENSGT00940000154270.a.b.e.a.a.a.a.a #27	ENSGT00940000154460.b.f.a.a.a	ENSGT00940000154270.a.b.e.a.a.a.b.a #27	ENSGT00940000154542.b.a.k.a.a.a.a.b ##29	ENSGT00940000154542.b.b.l #29	ENSGT00940000162707.m.b
Golden snub-nosed monkey	MODERN SPECIES	843	ADCK2 (ENSRROG00000044522)	NDUFB2 (ENSRROG00000029902)	BRAF (ENSRROG00000010145)	ENSRROG00000012111	MRPS33 (ENSRROG00000036028) #7	TMEM178B (ENSRROG00000039953) #9	ENSRROG00000033402 #10	ENSRROG00000021882	DENND11 (ENSRROG00000031612) #11	WEE2 (ENSRROG00000013594) #12	SSBP1 (ENSRROG00000029359) #13	TAS2R5 (ENSRROG00000019559) ##14	PRSS37 (ENSRROG00000039139) #16	OR9A4 (ENSRROG00000010627) #18	CLEC5A (ENSRROG00000039465) #19	ENSRROG00000038256 #22
Black snub-nosed monkey	MODERN SPECIES	1030	ADCK2 (ENSRBIG00000034656)	NDUFB2 (ENSRBIG00000019926)	BRAF (ENSRBIG00000034807)	ENSRBIG00000029491	MRPS33 (ENSRBIG00000009406) #7	TMEM178B (ENSRBIG00000021689) #9	AGK (ENSRBIG00000032192) #10	ENSRBIG00000000681	DENND11 (ENSRBIG00000000540) #11	WEE2 (ENSRBIG00000031199) #12	SSBP1 (ENSRBIG00000028396) #13	TAS2R5 (ENSRBIG00000006452) ##14	PRSS37 (ENSRBIG00000038319) #16	OR9A4 (ENSRBIG00000031832) #18	CLEC5A (ENSRBIG00000018399) #19	MGAM (ENSRBIG00000027925) #22	MGAM2 (ENSRBIG00000029407) #21	ENSRBIG00000032600	PRSS58 (ENSRBIG00000040803) #23	ENSRBIG00000041017 #25	TRBV2 (ENSRBIG00000031390)	TRBV3-1 (ENSRBIG00000041947)	TRBV7-3 (ENSRBIG00000019786)	TRBV9 (ENSRBIG00000010651) #28	TRBV10-1 (ENSRBIG00000007349) #29	TRBV7-4 (ENSRBIG00000037535)	ENSRBIG00000016473 #27	ENSRBIG00000029597 #27	TRBV6-7 (ENSRBIG00000030495) ##29	TRBV10-3 (ENSRBIG00000036730) #29	ENSRBIG00000041481
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.e.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796.q.a #13	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.b #26	ENSGT00940000162509.e.a #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b.e.a.a	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.b.e.a #27	ENSGT00940000154542.b.b.k #29	ENSGT00940000164371
Cebidae	ANCESTRAL SPECIES	9	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.e.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796.q.a #13	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.b #26	ENSGT00940000162509.e.a #26	ENSGT00940000154270.a.b.e.b #27	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b.e.a.a	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.b.e.a #27	ENSGT00940000154542.b.b.k #29	ENSGT00940000164371
Cebidae_a	ANCESTRAL SPECIES	33	ENSGT00950000183077.a.a.a.a.a.a	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.e.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00910000146873	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796.q.a #13	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT01020000230389.b.a.a.a.b #23	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.b #26	ENSGT00940000154460.b.e.a.b	ENSGT00940000154542.b.b.k #29	ENSGT00940000154460.b.f	ENSGT00940000162707.m.b	ENSGT00940000155819.d	ENSGT00940000163545.a	ENSGT00940000155819.c.a	ENSGT00940000162480.b	ENSGT00940000164297
Capuchin	MODERN SPECIES	260	MKRN1 (ENSCCAG00000037582)	DENND2A (ENSCCAG00000027573)	ENSCCAG00000008528	NDUFB2 (ENSCCAG00000029688)	BRAF (ENSCCAG00000031128)	ENSCCAG00000027727	ENSCCAG00000035520 #7	TMEM178B (ENSCCAG00000032284) #9	AGK (ENSCCAG00000036439) #10	DENND11 (ENSCCAG00000024825) #11	WEE2 (ENSCCAG00000033355) #12	ENSCCAG00000037419 #13	PRSS37 (ENSCCAG00000030678) #16	OR9A4 (ENSCCAG00000037742) #18	CLEC5A (ENSCCAG00000023805) #19	ENSCCAG00000030808 #22
Bolivian squirrel monkey	MODERN SPECIES	77	ENSSBOG00000023992	DENND2A (ENSSBOG00000027489)	ADCK2 (ENSSBOG00000005779)	ENSSBOG00000031343	BRAF (ENSSBOG00000028284)	ENSSBOG00000022573 #7	TMEM178B (ENSSBOG00000022271) #9	AGK (ENSSBOG00000019979) #10	ENSSBOG00000031574	DENND11 (ENSSBOG00000034522) #11	WEE2 (ENSSBOG00000027383) #12	ENSSBOG00000029766 #13	PRSS37 (ENSSBOG00000009697) #16	ENSSBOG00000008809	CLEC5A (ENSSBOG00000026187) #19	MGAM (ENSSBOG00000030990) #22	ENSSBOG00000023030 #21	ENSSBOG00000033951 #25	PRSS58 (ENSSBOG00000028857) #23	TRBV2 (ENSSBOG00000018075)	TRBV4-2 (ENSSBOG00000009509) #26	TRBV7-3 (ENSSBOG00000018082)	TRBV10-1 (ENSSBOG00000016754) #29	ENSSBOG00000018094	ENSSBOG00000014859	TRBV14 (ENSSBOG00000029655)	TRBV16 (ENSSBOG00000013613)	TRBV19 (ENSSBOG00000031452)	ENSSBOG00000006668	TRBV25-1 (ENSSBOG00000018465)	TRBV27 (ENSSBOG00000035953)
Marmoset	MODERN SPECIES	20	ADCK2 (ENSCJAG00000013509)	NDUFB2 (ENSCJAG00000013524)	BRAF (ENSCJAG00000013536)	ENSCJAG00000081978 #7	ENSCJAG00000086471	TMEM178B (ENSCJAG00000013588) #9	AGK (ENSCJAG00000013589) #10	DENND11 (ENSCJAG00000013621) #11	WEE2 (ENSCJAG00000013627) #12	SSBP1 (ENSCJAG00000013650) #13	PRSS37 (ENSCJAG00000013663) #16	ENSCJAG00000004026	ENSCJAG00000077616	CLEC5A (ENSCJAG00000087307) #19	TAS2R38 (ENSCJAG00000013686) #20	MGAM (ENSCJAG00000013692) #22	MGAM2 (ENSCJAG00000036807) #21	PRSS58 (ENSCJAG00000013813) #23	ENSCJAG00000062999 #24	ENSCJAG00000013826 #25	TRBV2 (ENSCJAG00000076376)	TRBV3-1 (ENSCJAG00000013834)	ENSCJAG00000062848 #27	ENSCJAG00000081723 ##29	ENSCJAG00000060470 #26	ENSCJAG00000085489 #26	ENSCJAG00000057767 #27	ENSCJAG00000087030 ##29	TRBV7-2 (ENSCJAG00000083439)	TRBV7-3 (ENSCJAG00000063020)	ENSCJAG00000086627 #27
Mas night monkey	MODERN SPECIES	984	MKRN1 (ENSANAG00000036978)	DENND2A (ENSANAG00000034617)	ADCK2 (ENSANAG00000031411)	NDUFB2 (ENSANAG00000024539)	BRAF (ENSANAG00000030685)	ENSANAG00000036985 #7	ENSANAG00000035332 #9	AGK (ENSANAG00000034272) #10	ENSANAG00000025415	DENND11 (ENSANAG00000025741) #11	WEE2 (ENSANAG00000028062) #12	SSBP1 (ENSANAG00000021855) #13	PRSS37 (ENSANAG00000025837) #16	ENSANAG00000013359	CLEC5A (ENSANAG00000023741) #19	MGAM (ENSANAG00000026732) #22	MGAM2 (ENSANAG00000028334) #21	PRSS58 (ENSANAG00000025309) #23	TRBV2 (ENSANAG00000019846)	TRBV7-3 (ENSANAG00000025212)	TRBV10-1 (ENSANAG00000019734) #29	ENSANAG00000020863	TRBV7-9 (ENSANAG00000038442)	ENSANAG00000019721	TRBV16 (ENSANAG00000006214)	ENSANAG00000006270	TRBV24-1 (ENSANAG00000005245)	TRBV27 (ENSANAG00000005926)	ENSANAG00000036006 ##25	ENSANAG00000020140	ENSANAG00000020186
Tarsier	MODERN SPECIES	4510														ENSTSYG00000033979 #18	CLEC5A (ENSTSYG00000007262) #19	MGAM (ENSTSYG00000012403) #22	ENSTSYG00000007323 #21	PRSS58 (ENSTSYG00000011800) #23	ENSTSYG00000014506 #25
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a ##25	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27
Tree shrew	MODERN SPECIES	4206																ENSTBEG00000006608 #22	ENSTBEG00000007692	ENSTBEG00000008649
Glires	ANCESTRAL SPECIES	18	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a ##25	ENSGT00940000162509.l #26	ENSGT00940000154270.a.b #27	ENSGT00940000154460.b	ENSGT00940000164371	ENSGT00940000162707	ENSGT00940000155819.d	ENSGT01050000244883.A.a.a.a.b.k.b ##25	ENSGT00940000162509.k #26
Lagomorpha	ANCESTRAL SPECIES	107							ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.b.x ##25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.l #26	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.b #29	ENSGT00940000162707
Rabbit	MODERN SPECIES	491					ENSOCUG00000022873 #9	DENND11 (ENSOCUG00000017559) #11	WEE2 (ENSOCUG00000026396) #12	ENSOCUG00000003799 #13	TAS2R3 (ENSOCUG00000003800) #14	TAS2R4 (ENSOCUG00000003805) #15	PRSS37 (ENSOCUG00000006129) #16	ENSOCUG00000022171 #24	ENSOCUG00000037719	CLEC5A (ENSOCUG00000009582) #19	ENSOCUG00000031008 #20	MGAM (ENSOCUG00000008177) #22	ENSOCUG00000000872 #21	ENSOCUG00000000387	ENSOCUG00000025914	PRSS58 (ENSOCUG00000000389) #23	ENSOCUG00000000393 #24	ENSOCUG00000025211 ##25	ENSOCUG00000026000 ##25	ENSOCUG00000027848	TRBV3-1 (ENSOCUG00000039506)	ENSOCUG00000029175 #26	ENSOCUG00000026804	ENSOCUG00000039258 ##29	ENSOCUG00000025257 #27	ENSOCUG00000037694	ENSOCUG00000022958 #27
Pika	MODERN SPECIES	4974																ENSOPRG00000006341 #22
Rodentia	ANCESTRAL SPECIES	12	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163043	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.a.a ##25	ENSGT00940000162509.l #26	ENSGT00940000154270.a.b #27	ENSGT00940000154460.b	ENSGT00940000164371	ENSGT00940000162707	ENSGT00940000155819.d
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.b ##25	ENSGT00940000162509.k #26	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.l #26	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.b ##25	ENSGT00940000162509.k #26	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.l #26	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b
Muroidea	ANCESTRAL SPECIES	8	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.a ##25	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b ##25	ENSGT00730000111153	ENSGT00440000034680	ENSGT00940000160399.d	ENSGT00940000156687.g	ENSGT00940000161809	ENSGT00390000018785
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT00940000154542.b.b.i.b #29	ENSGT00940000164371	ENSGT00940000162707	ENSGT00940000164102	ENSGT00940000163545.a	ENSGT00530000064313.b	ENSGT00940000155819.c.a	ENSGT00940000155819.c.b.d
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00390000001536	ENSGT00390000004044.w	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.a.a ##25	ENSGT00940000162509.l #26	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000163595.c.a.b	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b.f ##25	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.a ##25	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b.e.a ##25	ENSGT00730000111153
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00390000001536	ENSGT00390000004044.w	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.a.a ##25	ENSGT00940000162509.l #26	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000163595.c.a.b	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b.f ##25	ENSGT00730000111153	ENSGT00440000034680	ENSGT00940000160399.d
Northern American deer mouse	MODERN SPECIES	16	Adck2 (ENSPEMG00000021773)	ENSPEMG00000023701	Braf (ENSPEMG00000001337)	ENSPEMG00000021616 #7	ENSPEMG00000016644 #9	Agk (ENSPEMG00000018886) #10	Dennd11 (ENSPEMG00000009508) #11	Wee2 (ENSPEMG00000012913) #12	Ssbp1 (ENSPEMG00000011838) #13	Tas2r137 (ENSPEMG00000013488) #14	Tas2r108 (ENSPEMG00000026064) #15	Prss37 (ENSPEMG00000017152) #16	Or9a4 (ENSPEMG00000009189) #18	Clec5a (ENSPEMG00000017851) #19	Tas2r138 (ENSPEMG00000001418) #20	ENSPEMG00000008741 #22	Mgam2-ps (ENSPEMG00000028150) #21	Moxd2 (ENSPEMG00000005786)	Prss58 (ENSPEMG00000010113) #23	Prss59 (ENSPEMG00000016197) #24	ENSPEMG00000025308 ##25	ENSPEMG00000027928 ##25	ENSPEMG00000028207 ##25	ENSPEMG00000008477 ##25	Trbv5 (ENSPEMG00000026232) #26	ENSPEMG00000026074 ##29	ENSPEMG00000024439	ENSPEMG00000026046	ENSPEMG00000031276 #29	ENSPEMG00000031290 #29	ENSPEMG00000025853 #29
Prairie vole	MODERN SPECIES	87	Mkrn1 (ENSMOCG00000006155)	Dennd2a (ENSMOCG00000012296)	Adck2 (ENSMOCG00000021171)	ENSMOCG00000016120	Braf (ENSMOCG00000023027)	ENSMOCG00000016152 #7	ENSMOCG00000020593 #9	ENSMOCG00000000534	Agk (ENSMOCG00000003528) #10	Dennd11 (ENSMOCG00000018809) #11	Wee2 (ENSMOCG00000000778) #12	Ssbp1 (ENSMOCG00000015007) #13	Prss37 (ENSMOCG00000000882) #16	Or9a4 (ENSMOCG00000002678) #18	Clec5a (ENSMOCG00000016188) #19	ENSMOCG00000013070 #22	Moxd2 (ENSMOCG00000014636)	Prss58 (ENSMOCG00000001185) #23	Prss59 (ENSMOCG00000004650) #24	ENSMOCG00000003387 ##25	ENSMOCG00000012091 ##25
Cricetinae	ANCESTRAL SPECIES	23	ENSGT00390000001536	ENSGT00390000004044.w	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.a ##25	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.a ##25	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b.f ##25	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b.e.a ##25	ENSGT00730000111153	ENSGT00940000160399.d	ENSGT00940000156687.g	ENSGT00940000161809	ENSGT00390000018785	ENSGT00940000161830
Chinese hamster chok1gshd	MODERN SPECIES	54	Or10c1 (ENSCGRG00001011439)	Or11a4 (ENSCGRG00001012269)	Or12d13 (ENSCGRG00001002283)	ENSCGRG00001003501	ENSCGRG00001013793	ENSCGRG00001008265	Or12d17 (ENSCGRG00001007577)	H2-M2 (ENSCGRG00001009530)	ENSCGRG00001009108	ENSCGRG00001009969	ENSCGRG00001009271	ENSCGRG00001022223	Or9a4 (ENSCGRG00001010177) #18	Clec5a (ENSCGRG00001006792) #19	Tas2r138 (ENSCGRG00001001801) #20	ENSCGRG00001013298 #22	ENSCGRG00001013020	ENSCGRG00001020433	Moxd2 (ENSCGRG00001001835)	Prss58 (ENSCGRG00001024302) #23	Prss59 (ENSCGRG00001006469) #24	ENSCGRG00001013753 ##25	ENSCGRG00001016337 ##25	ENSCGRG00001018420 ##25	ENSCGRG00001014573 ##25	ENSCGRG00001020842 ##25	ENSCGRG00001023464 ##25	ENSCGRG00001018090 ##25	ENSCGRG00001010859 ##25	ENSCGRG00001012750	ENSCGRG00001020855
Golden Hamster	MODERN SPECIES	817	Ndufb2 (ENSMAUG00000000340)	Braf (ENSMAUG00000016066)	Mrps33 (ENSMAUG00000014314) #7	ENSMAUG00000018327	ENSMAUG00000017929 #9	ENSMAUG00000016360	Agk (ENSMAUG00000015011) #10	Dennd11 (ENSMAUG00000014079) #11	ENSMAUG00000013965	Wee2 (ENSMAUG00000013105) #12	ENSMAUG00000016883 #13	Tas2r108 (ENSMAUG00000015894) #15	Prss37 (ENSMAUG00000014269) #16	Or9a4 (ENSMAUG00000015834) #18	Clec5a (ENSMAUG00000013571) #19	ENSMAUG00000011057 #22	ENSMAUG00000011729
Murinae	ANCESTRAL SPECIES	4	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.b ##25	ENSGT00940000162509.k #26	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.l #26	ENSGT00940000154542.b.a ##29	ENSGT00940000154542.b.b.j #29	ENSGT00940000154270.a.b #27
Mus	ANCESTRAL SPECIES	20	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.b ##25	ENSGT00940000162509.k #26	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.l #26	ENSGT00940000154270.a.b.j #27	ENSGT00940000154542.b.b.j #29	ENSGT00940000154270.a.b.i #27
Shrew mouse	MODERN SPECIES	11	MGP_PahariEiJ_G0022007	Ndufb2 (MGP_PahariEiJ_G0022008)	Braf (MGP_PahariEiJ_G0022009)	Mrps33 (MGP_PahariEiJ_G0022010) #7	MGP_PahariEiJ_G0022011 #9	Agk (MGP_PahariEiJ_G0022012) #10	Dennd11 (MGP_PahariEiJ_G0022013) #11	Wee2 (MGP_PahariEiJ_G0022014) #12	Ssbp1 (MGP_PahariEiJ_G0022015) #13	MGP_PahariEiJ_G0022016	Tas2r108 (MGP_PahariEiJ_G0022017) #15	Prss37 (MGP_PahariEiJ_G0022018) #16	Or9a4 (MGP_PahariEiJ_G0022019) #18	Clec5a (MGP_PahariEiJ_G0022020) #19	Tas2r138 (MGP_PahariEiJ_G0022021) #20	MGP_PahariEiJ_G0022022 #22	Moxd2 (MGP_PahariEiJ_G0022023)	Trbv1 (MGP_PahariEiJ_G0002045)	Prss58 (MGP_PahariEiJ_G0022024) #23	Prss59 (MGP_PahariEiJ_G0022025) #24	MGP_PahariEiJ_G0022026 ##25	MGP_PahariEiJ_G0022027 ##25	MGP_PahariEiJ_G0022028 ##25	Prss3b (MGP_PahariEiJ_G0022029) ##25	Trbv2 (MGP_PahariEiJ_G0002046) #26	Trbv3 (MGP_PahariEiJ_G0002047)	MGP_PahariEiJ_G0002048	Trbv5 (MGP_PahariEiJ_G0002049) #26	Trbv12-1 (MGP_PahariEiJ_G0002050) #27	Trbv13-1 (MGP_PahariEiJ_G0002051) #29	Trbv12-2 (MGP_PahariEiJ_G0002052) #27
Mus_A	ANCESTRAL SPECIES	7	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.s #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.b ##25	ENSGT00940000162509.k #26	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.l #26	ENSGT00940000154270.a.b.j #27	ENSGT00940000154542.b.b.j #29	ENSGT00940000154270.a.b.i #27
Ryukyu mouse	MODERN SPECIES	15	Ndufb2 (MGP_CAROLIEiJ_G0028250)	Braf (MGP_CAROLIEiJ_G0028251)	Mrps33 (MGP_CAROLIEiJ_G0028252) #7	MGP_CAROLIEiJ_G0028253 #9	Agk (MGP_CAROLIEiJ_G0028254) #10	Dennd11 (MGP_CAROLIEiJ_G0028255) #11	Wee2 (MGP_CAROLIEiJ_G0028256) #12	Ssbp1 (MGP_CAROLIEiJ_G0028257) #13	MGP_CAROLIEiJ_G0028258	Tas2r108 (MGP_CAROLIEiJ_G0028259) #15	Prss37 (MGP_CAROLIEiJ_G0028260) #16	Or9a7 (MGP_CAROLIEiJ_G0028261) #17	Or9a4 (MGP_CAROLIEiJ_G0028262) #18	Clec5a (MGP_CAROLIEiJ_G0028263) #19	Tas2r138 (MGP_CAROLIEiJ_G0028264) #20	MGP_CAROLIEiJ_G0028265 #22	Moxd2 (MGP_CAROLIEiJ_G0028266)	Trbv1 (MGP_CAROLIEiJ_G0002243)	Prss58 (MGP_CAROLIEiJ_G0028267) #23	Prss59 (MGP_CAROLIEiJ_G0028268) #24	MGP_CAROLIEiJ_G0028269 ##25	MGP_CAROLIEiJ_G0028270 ##25	MGP_CAROLIEiJ_G0028271 ##25	Prss3b (MGP_CAROLIEiJ_G0028272) ##25	Trbv2 (MGP_CAROLIEiJ_G0002244) #26	Trbv3 (MGP_CAROLIEiJ_G0002245)	MGP_CAROLIEiJ_G0002246	Trbv5 (MGP_CAROLIEiJ_G0002247) #26	Trbv12-1 (MGP_CAROLIEiJ_G0002248) #27	Trbv13-1 (MGP_CAROLIEiJ_G0002249) #29	Trbv12-2 (MGP_CAROLIEiJ_G0002250) #27
Mus_B	ANCESTRAL SPECIES	20	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.s #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.b ##25	ENSGT00940000162509.k #26	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.l #26	ENSGT00940000154270.a.b.j #27	ENSGT00940000154542.b.b.j #29	ENSGT00940000154270.a.b.i #27
Mouse	MODERN SPECIES	15	Ndufb2 (ENSMUSG00000002416)	Braf (ENSMUSG00000002413)	Mrps33 (ENSMUSG00000029918) #7	Tmem178b (ENSMUSG00000057716) #9	Agk (ENSMUSG00000029916) #10	Dennd11 (ENSMUSG00000037172) #11	Wee2 (ENSMUSG00000037159) #12	Ssbp1 (ENSMUSG00000029911) #13	Tas2r137 (ENSMUSG00000052850) #14	Tas2r108 (ENSMUSG00000037140) #15	Prss37 (ENSMUSG00000029909) #16	Or9a7 (ENSMUSG00000068259) #17	Or9a4 (ENSMUSG00000045514) #18	Clec5a (ENSMUSG00000029915) #19	Tas2r138 (ENSMUSG00000058250) #20	Mgam (ENSMUSG00000068587) #22	Mgam2-ps (ENSMUSG00000102802) #21	Moxd2 (ENSMUSG00000029885)	Trbv1 (ENSMUSG00000076461)	Prss58 (ENSMUSG00000051936) #23	Prss59 (ENSMUSG00000029883) #24	1810009J06Rik (ENSMUSG00000094808) ##25	Gm2663 (ENSMUSG00000096525) ##25	Prss3b (ENSMUSG00000029882) ##25	Trbv2 (ENSMUSG00000076462) #26	Trbv3 (ENSMUSG00000076463)	Trbv4 (ENSMUSG00000107486)	Trbv5 (ENSMUSG00000076465) #26	Trbv12-1 (ENSMUSG00000095574) #27	Trbv13-1 (ENSMUSG00000076467) #29	Trbv12-2 (ENSMUSG00000094525) #27
Mus_C	ANCESTRAL SPECIES	19	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.s #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.b ##25	ENSGT00940000162509.k #26	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.l #26	ENSGT00940000154270.a.b.j #27	ENSGT00940000154542.b.b.j #29	ENSGT00940000154270.a.b.i #27
spretus	MODERN SPECIES	15	Ndufb2 (MGP_SPRETEiJ_G0029249)	Braf (MGP_SPRETEiJ_G0029250)	Mrps33 (MGP_SPRETEiJ_G0029251) #7	MGP_SPRETEiJ_G0029252 #9	Agk (MGP_SPRETEiJ_G0029253) #10	Dennd11 (MGP_SPRETEiJ_G0029254) #11	Wee2 (MGP_SPRETEiJ_G0029255) #12	Ssbp1 (MGP_SPRETEiJ_G0029256) #13	MGP_SPRETEiJ_G0029257	Tas2r108 (MGP_SPRETEiJ_G0029258) #15	Prss37 (MGP_SPRETEiJ_G0029259) #16	MGP_SPRETEiJ_G0029260	Or9a4 (MGP_SPRETEiJ_G0029261) #18	Clec5a (MGP_SPRETEiJ_G0029262) #19	Tas2r138 (MGP_SPRETEiJ_G0029263) #20	MGP_SPRETEiJ_G0029264 #22	Moxd2 (MGP_SPRETEiJ_G0029265)	Trbv1 (MGP_SPRETEiJ_G0002397)	Prss58 (MGP_SPRETEiJ_G0029266) #23	Prss59 (MGP_SPRETEiJ_G0029267) #24	MGP_SPRETEiJ_G0029268 ##25	MGP_SPRETEiJ_G0029269 ##25	MGP_SPRETEiJ_G0029270 ##25	Prss3b (MGP_SPRETEiJ_G0029271) ##25	Trbv2 (MGP_SPRETEiJ_G0002398) #26	Trbv3 (MGP_SPRETEiJ_G0002399)	MGP_SPRETEiJ_G0002400	Trbv5 (MGP_SPRETEiJ_G0002401) #26	Trbv12-1 (MGP_SPRETEiJ_G0002402) #27	Trbv13-1 (MGP_SPRETEiJ_G0002403) #29	Trbv12-2 (MGP_SPRETEiJ_G0002404) #27
Steppe mouse	MODERN SPECIES	3159	Adck2 (ENSMSIG00000003366)	Ndufb2 (ENSMSIG00000003342)	Braf (ENSMSIG00000003138)	ENSMSIG00000003115 #7	ENSMSIG00000003101 #9	Agk (ENSMSIG00000003072) #10	Dennd11 (ENSMSIG00000003036) #11	Wee2 (ENSMSIG00000002990) #12	Ssbp1 (ENSMSIG00000002905) #13	Tas2r137 (ENSMSIG00000002897) #14	Tas2r108 (ENSMSIG00000002885) #15	Prss37 (ENSMSIG00000002853) #16	Or9a7 (ENSMSIG00000002837) #17	Clec5a (ENSMSIG00000002705) #19	Tas2r138 (ENSMSIG00000002690) #20	ENSMSIG00000002337 #22	ENSMSIG00000001963 #21	Moxd2 (ENSMSIG00000001914)	Trbv1 (ENSMSIG00000001891)	Prss59 (ENSMSIG00000001848) #24	ENSMSIG00000001830 ##25
Rat	MODERN SPECIES	14	Dennd2a (ENSRNOG00000026748)	Ndufb2 (ENSRNOG00000010005)	Braf (ENSRNOG00000010957)	Mrps33 (ENSRNOG00000026528) #7	Tmem178b (ENSRNOG00000047635) #9	Agk (ENSRNOG00000011509) #10	Dennd11 (ENSRNOG00000011854) #11	Wee2 (ENSRNOG00000026446) #12	Ssbp1 (ENSRNOG00000012100) #13	Tas2r137 (ENSRNOG00000030413) #14	Tas2r108 (ENSRNOG00000012195) #15	Prss37 (ENSRNOG00000012201) #16	Or9a4 (ENSRNOG00000066955) #18	Clec5a (ENSRNOG00000026306) #19	Tas2r138 (ENSRNOG00000026225) #20	Mgam (ENSRNOG00000026177) #22	Mgam2 (ENSRNOG00000066165) #21	Moxd2 (ENSRNOG00000012916)	Trbv1 (ENSRNOG00000048468)	Prss58 (ENSRNOG00000013132) #23	Prss59 (ENSRNOG00000028989) #24	LOC312273 (ENSRNOG00000013203) ##25	LOC286960 (ENSRNOG00000013245) ##25	Prss3b (ENSRNOG00000013382) ##25	ENSRNOG00000068912 #26	ENSRNOG00000064685	ENSRNOG00000065521 #29	ENSRNOG00000067769 #29	ENSRNOG00000063691 #27	ENSRNOG00000070606 #29	ENSRNOG00000068200
Upper Galilee mountains blind mole rat	MODERN SPECIES	1840	Ndufb2 (ENSNGAG00000016898)	Braf (ENSNGAG00000014000)	ENSNGAG00000011360	Mrps33 (ENSNGAG00000014172) #7	ENSNGAG00000021460 #9	Agk (ENSNGAG00000007692) #10	Dennd11 (ENSNGAG00000011955) #11	ENSNGAG00000019527	Ssbp1 (ENSNGAG00000014269) #13	Tas2r137 (ENSNGAG00000016702) #14	Tas2r108 (ENSNGAG00000015066) #15	Prss37 (ENSNGAG00000000102) #16	Or9a7 (ENSNGAG00000017910) #17	Clec5a (ENSNGAG00000017609) #19	Tas2r138 (ENSNGAG00000015138) #20	ENSNGAG00000010341 #22
Kangaroo rat	MODERN SPECIES	375	Rab19 (ENSDORG00000006983)	Mkrn1 (ENSDORG00000003480)	Dennd2a (ENSDORG00000016236)	Adck2 (ENSDORG00000030048)	ENSDORG00000009731	Braf (ENSDORG00000009732)	ENSDORG00000024624	Mrps33 (ENSDORG00000007444) #7	ENSDORG00000026381 #9	Agk (ENSDORG00000003733) #10	Dennd11 (ENSDORG00000003736) #11	Wee2 (ENSDORG00000015156) #12	Ssbp1 (ENSDORG00000015161) #13	Prss37 (ENSDORG00000015166) #16	Clec5a (ENSDORG00000000839) #19	ENSDORG00000007415 #22	ENSDORG00000007422	Moxd2 (ENSDORG00000007423)	Prss58 (ENSDORG00000007425) #23	Prss59 (ENSDORG00000027379) #24	ENSDORG00000007428 ##25	ENSDORG00000026650 #25	ENSDORG00000025187 ##25	ENSDORG00000024335 ##25	ENSDORG00000025731 ##25	ENSDORG00000023156 ##25	ENSDORG00000025009 ##25	ENSDORG00000008690 ##25	Ephb6 (ENSDORG00000008691)	Trpv6 (ENSDORG00000008692)	Trpv5 (ENSDORG00000008637)
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163043	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.a ##29	ENSGT00940000163595.c.a.b	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000164102
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b ##25	ENSGT00940000162480.a	ENSGT01050000244883.A.a.a.a.a.d ##25	ENSGT00730000111153	ENSGT00440000034680	ENSGT00940000160399.d	ENSGT00940000156687.g	ENSGT00940000161809	ENSGT00390000018785	ENSGT00940000161830
Marmotini	ANCESTRAL SPECIES	32	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.y.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.b ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.a ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.d ##25	ENSGT00940000162480.a	ENSGT01050000244883.A.a.a.a.a.d ##25	ENSGT00730000111153	ENSGT00440000034680	ENSGT00940000160399.d	ENSGT00940000156687.g
Marmotini_b	ANCESTRAL SPECIES	117	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401.y.a #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22
Arctic ground squirrel	MODERN SPECIES	318	BRAF (ENSUPAG00010015886)	ENSUPAG00010015929	MRPS33 (ENSUPAG00010015943) #7	TMEM178B (ENSUPAG00010015946) #9	AGK (ENSUPAG00010015967) #10	DENND11 (ENSUPAG00010015983) #11	WEE2 (ENSUPAG00010015989) #12	SSBP1 (ENSUPAG00010016004) #13	ENSUPAG00010016035 #14	TAS2R4 (ENSUPAG00010016043) #15	ENSUPAG00010016047 #14	PRSS37 (ENSUPAG00010016052) #16	OR9A1P (ENSUPAG00010016064) #17	OR9A4 (ENSUPAG00010016069) #18	CLEC5A (ENSUPAG00010016074) #19	MGAM (ENSUPAG00010016104) #22
Squirrel	MODERN SPECIES	192	KDM7A (ENSSTOG00000012789)	ENSSTOG00000010929	ENSSTOG00000031161	DENND2A (ENSSTOG00000002912)	ADCK2 (ENSSTOG00000002559)	NDUFB2 (ENSSTOG00000002566)	BRAF (ENSSTOG00000002569)	ENSSTOG00000001019 #7	TMEM178B (ENSSTOG00000023428) #9	AGK (ENSSTOG00000020008) #10	DENND11 (ENSSTOG00000006980) #11	SSBP1 (ENSSTOG00000007007) #13	PRSS37 (ENSSTOG00000014505) #16	OR9A4 (ENSSTOG00000028119) #18	CLEC5A (ENSSTOG00000015960) #19	ENSSTOG00000003319 #22
Alpin marmot	MODERN SPECIES	35	ENSMMMG00000011427 #7	ENSMMMG00000011416	ENSMMMG00000011406 #7	TMEM178B (ENSMMMG00000011372) #9	AGK (ENSMMMG00000011318) #10	DENND11 (ENSMMMG00000011283) #11	WEE2 (ENSMMMG00000011258) #12	SSBP1 (ENSMMMG00000011224) #13	ENSMMMG00000011214 #14	TAS2R4 (ENSMMMG00000011210) #15	ENSMMMG00000011201 #14	PRSS37 (ENSMMMG00000011182) #16	OR9A1P (ENSMMMG00000011173) #17	OR9A4 (ENSMMMG00000011167) #18	CLEC5A (ENSMMMG00000011125) #19	MGAM (ENSMMMG00000010862) #22	MGAM2 (ENSMMMG00000009935) #21	ENSMMMG00000009899	PRSS58 (ENSMMMG00000009890) #23	ENSMMMG00000009883 #24	ENSMMMG00000009748 ##25	ENSMMMG00000008868 ##25	ENSMMMG00000008499 ##25	ENSMMMG00000008486 ##25	ENSMMMG00000008474 ##25	ENSMMMG00000008472	ENSMMMG00000008467 #28	ENSMMMG00000008456 #29	ENSMMMG00000008430	ENSMMMG00000008427	ENSMMMG00000008422 #28
Eurasian red squirrel	MODERN SPECIES	17	BRAF (ENSSVLG00005011137)	ENSSVLG00005011057	MRPS33 (ENSSVLG00005011000) #7	TMEM178B (ENSSVLG00005010943) #9	AGK (ENSSVLG00005010726) #10	DENND11 (ENSSVLG00005010569) #11	ENSSVLG00005010476 #12	SSBP1 (ENSSVLG00005010423) #13	ENSSVLG00005010410 #14	ENSSVLG00005010344 #14	PRSS37 (ENSSVLG00005010291) #16	OR9A1P (ENSSVLG00005010283) #17	OR9A4 (ENSSVLG00005010273) #18	CLEC5A (ENSSVLG00005010134) #19	TAS2R38 (ENSSVLG00005010093) #20	MGAM (ENSSVLG00005009048) #22	ENSSVLG00005008783 #21	ENSSVLG00005008706	PRSS58 (ENSSVLG00005017027) #23	ENSSVLG00005016942 #24	ENSSVLG00005016228 ##25	ENSSVLG00005016073 ##25	ENSSVLG00005015340 ##25	ENSSVLG00005015127 ##25	ENSSVLG00005014445 ##25	ENSSVLG00005014303 #28	ENSSVLG00005014256 ##29	ENSSVLG00005014184 #27	ENSSVLG00005014096 #29	ENSSVLG00005014036	ENSSVLG00005013987
Hystricomorpha	ANCESTRAL SPECIES	35	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163043	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000163545.a	ENSGT00940000155819.c.a	ENSGT00940000155819.c.b	ENSGT00940000163595.c.b	ENSGT00730000111153	ENSGT00940000165088	ENSGT00440000034680
Hystricomorpha_a	ANCESTRAL SPECIES	40	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT00940000163545.a	ENSGT00940000162480.b	ENSGT01050000244883.A.a.a.b.x.m ##25	ENSGT00940000156687.g	ENSGT00940000160399.d	ENSGT00940000161809	ENSGT00390000018785	ENSGT00940000161830
Guinea pig	MODERN SPECIES	10	MKRN1 (ENSCPOG00000000948)	DENND2A (ENSCPOG00000030550)	ADCK2 (ENSCPOG00000031703)	NDUFB2 (ENSCPOG00000025368)	BRAF (ENSCPOG00000021487)	MRPS33 (ENSCPOG00000038792) #7	ENSCPOG00000020150 #9	AGK (ENSCPOG00000015447) #10	DENND11 (ENSCPOG00000015452) #11	ENSCPOG00000025291 #12	SSBP1 (ENSCPOG00000040289) #13	TAS2R3 (ENSCPOG00000007635) #14	TAS2R4 (ENSCPOG00000026813) #15	PRSS37 (ENSCPOG00000004461) #16	CLEC5A (ENSCPOG00000039585) #19	MGAM (ENSCPOG00000011280) #22	ENSCPOG00000039963	MGAM2 (ENSCPOG00000009935) #21	PRSS58 (ENSCPOG00000006756) #23	ENSCPOG00000021713 #24	ENSCPOG00000026673 #25	ENSCPOG00000010598	ENSCPOG00000025586	ENSCPOG00000032580	ENSCPOG00000038762	ENSCPOG00000038847	ENSCPOG00000036686 #29	TRBV19 (ENSCPOG00000038050)	TRBV24-1 (ENSCPOG00000033416)	ENSCPOG00000008400 ##25	TRPV6 (ENSCPOG00000000470)
Hystricomorpha_b	ANCESTRAL SPECIES	40	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.b	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT00940000161483 #16	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ##25	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##25	ENSGT01050000244883.A.a.a.b.x.m ##25	ENSGT00940000156687.g	ENSGT00940000160399.d	ENSGT00940000161809	ENSGT00390000018785	ENSGT00940000161830	ENSGT00390000002099	ENSGT00440000033697
Long-tailed chinchilla	MODERN SPECIES	201	ADCK2 (ENSCLAG00000001471)	NDUFB2 (ENSCLAG00000001447)	ENSCLAG00000001414	ENSCLAG00000001297	ENSCLAG00000001167	MRPS33 (ENSCLAG00000001134) #7	ENSCLAG00000001114 #9	AGK (ENSCLAG00000001071) #10	DENND11 (ENSCLAG00000001043) #11	ENSCLAG00000001751	WEE2 (ENSCLAG00000009356) #12	SSBP1 (ENSCLAG00000009247) #13	PRSS37 (ENSCLAG00000008886) #16	CLEC5A (ENSCLAG00000008820) #19	TAS2R38 (ENSCLAG00000008669) #20	ENSCLAG00000007384 #22	ENSCLAG00000003350	ENSCLAG00000003095	ENSCLAG00000003077	PRSS58 (ENSCLAG00000002996) #23	ENSCLAG00000001949 #24	ENSCLAG00000001291 ##25	ENSCLAG00000001271 #25	ENSCLAG00000001180 #29	ENSCLAG00000001157	ENSCLAG00000001113 ##25	TRPV6 (ENSCLAG00000001066)	EPHB6 (ENSCLAG00000001039)	TRPV5 (ENSCLAG00000001736)	ENSCLAG00000001692	KEL (ENSCLAG00000001601)
Degu	MODERN SPECIES	68	ENSODEG00000013658	ENSODEG00000013390	ENSODEG00000014071	NDUFB2 (ENSODEG00000013607)	BRAF (ENSODEG00000013401)	ENSODEG00000012846	ENSODEG00000014878	ENSODEG00000013320	ENSODEG00000013547 #9	AGK (ENSODEG00000015489) #10	DENND11 (ENSODEG00000013048) #11	ENSODEG00000013142 #12	ENSODEG00000013367 #13	PRSS37 (ENSODEG00000013473) #16	CLEC5A (ENSODEG00000013699) #19	ENSODEG00000014828 #22	ENSODEG00000013408	ENSODEG00000012690	PRSS58 (ENSODEG00000013832) #23	ENSODEG00000013684 #24	ENSODEG00000012923 ##25	ENSODEG00000012554 ##25	ENSODEG00000013222 ##25	ENSODEG00000014167	ENSODEG00000012766 ##25	TRPV6 (ENSODEG00000015340)	EPHB6 (ENSODEG00000012570)	TRPV5 (ENSODEG00000014153)	ENSODEG00000014532	KEL (ENSODEG00000014311)	ENSODEG00000012786
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	17	ENSHGLG00000046096	ENSHGLG00000038940	ENSHGLG00000009033	ENSHGLG00000007231	SPIN1 (ENSHGLG00000045201)	NXNL2 (ENSHGLG00000039721)	ENSHGLG00000032550	SHC3 (ENSHGLG00000009124)	CKS2 (ENSHGLG00000008721)	ENSHGLG00000014380	ENSHGLG00000008542	SEMA4D (ENSHGLG00000007257)	ENSHGLG00000006188	ENSHGLG00000004421	ENSHGLG00000012020 #21	ENSHGLG00000036048 #22	MGAM (ENSHGLG00000009763) #22	TAS2R38 (ENSHGLG00000008887) #20	CLEC5A (ENSHGLG00000041574) #19	PRSS37 (ENSHGLG00000006169) #16	TAS2R4 (ENSHGLG00000039087) #15	ENSHGLG00000009362 #13	ENSHGLG00000011701 #12	DENND11 (ENSHGLG00000010322) #11	AGK (ENSHGLG00000046237) #10	TMEM178B (ENSHGLG00000043245) #9	ENSHGLG00000040990 #7	ENSHGLG00000049810	BRAF (ENSHGLG00000014168)	ENSHGLG00000017933	ADCK2 (ENSHGLG00000037504)
Naked mole-rat female	MODERN SPECIES	17	DENND2A (ENSHGLG00000014310)	ADCK2 (ENSHGLG00000037504)	ENSHGLG00000017933	BRAF (ENSHGLG00000014168)	ENSHGLG00000049810	ENSHGLG00000040990 #7	TMEM178B (ENSHGLG00000043245) #9	AGK (ENSHGLG00000046237) #10	DENND11 (ENSHGLG00000010322) #11	ENSHGLG00000011701 #12	ENSHGLG00000009362 #13	TAS2R4 (ENSHGLG00000039087) #15	PRSS37 (ENSHGLG00000006169) #16	CLEC5A (ENSHGLG00000041574) #19	TAS2R38 (ENSHGLG00000008887) #20	MGAM (ENSHGLG00000009763) #22	ENSHGLG00000036048 #22	ENSHGLG00000012020 #21	ENSHGLG00000004421	ENSHGLG00000006188	SEMA4D (ENSHGLG00000007257)	ENSHGLG00000008542	ENSHGLG00000014380	CKS2 (ENSHGLG00000008721)	SHC3 (ENSHGLG00000009124)	ENSHGLG00000032550	NXNL2 (ENSHGLG00000039721)	SPIN1 (ENSHGLG00000045201)	ENSHGLG00000007231	ENSHGLG00000009033	ENSHGLG00000038940
Laurasiatheria	ANCESTRAL SPECIES	21	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.b #29	ENSGT00940000164371
Eulipotyphla	ANCESTRAL SPECIES	2397															ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22
Hedgehog	MODERN SPECIES	7541															TAS2R38 (ENSEEUG00000006676) #20	ENSEEUG00000006748 #22
Common shrew	MODERN SPECIES	5682																ENSSARG00000009394 #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.b #29
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00940000164718 #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.b ##27	ENSGT00940000154460.b	ENSGT00940000163595.c.a.b.a	ENSGT00940000154542.b.b #29
Suina	ANCESTRAL SPECIES	19	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000154460.a	ENSGT00940000162509 #26	ENSGT00940000154270.a.b.p #27	ENSGT00940000154270.b ##27	ENSGT00940000154460.b	ENSGT00940000164371	ENSGT00940000162707.j
Pig	MODERN SPECIES	9	BRAF (ENSSSCG00000016494)	ENSSSCG00000041343	MRPS33 (ENSSSCG00000013470) #7	TMEM178B (ENSSSCG00000016493) #9	AGK (ENSSSCG00000016492) #10	DENND11 (ENSSSCG00000016491) #11	WEE2 (ENSSSCG00000016489) #12	SSBP1 (ENSSSCG00000016488) #13	TAS2R3 (ENSSSCG00000028394) #14	TAS2R4 (ENSSSCG00000021525) #15	PRSS37 (ENSSSCG00000029612) #16	ENSSSCG00000027039 #18	OR9A1P (ENSSSCG00000061025) #17	ENSSSCG00000036925 #18	CLEC5A (ENSSSCG00000021933) #19	MGAM (ENSSSCG00000034639) #22	MGAM2 (ENSSSCG00000016487) #21	ENSSSCG00000016486	ENSSSCG00000037885	PRSS58 (ENSSSCG00000016485) #23	ENSSSCG00000016484 #24	ENSSSCG00000036013 #25	TRBV3-1 (ENSSSCG00000047566)	ENSSSCG00000055067	ENSSSCG00000058542 #26	ENSSSCG00000041692 #26	ENSSSCG00000046886 #27	ENSSSCG00000049878 ##27	ENSSSCG00000054082	ENSSSCG00000050449	ENSSSCG00000032495
Chacoan peccary	MODERN SPECIES	115	BRAF (ENSCWAG00000016905)	ENSCWAG00000017237	ENSCWAG00000017265	ENSCWAG00000017296	ENSCWAG00000017305 #7	TMEM178B (ENSCWAG00000017339) #9	AGK (ENSCWAG00000017395) #10	DENND11 (ENSCWAG00000017576) #11	WEE2 (ENSCWAG00000017685) #12	SSBP1 (ENSCWAG00000017760) #13	TAS2R3 (ENSCWAG00000017788) #14	TAS2R4 (ENSCWAG00000017801) #15	PRSS37 (ENSCWAG00000017816) #16	OR9A1P (ENSCWAG00000017858) #17	CLEC5A (ENSCWAG00000017884) #19	MGAM (ENSCWAG00000018138) #22	ENSCWAG00000018364 #21	ENSCWAG00000018429	ENSCWAG00000018564	PRSS58 (ENSCWAG00000018631) #23	ENSCWAG00000018658 #24	ENSCWAG00000018704 #25	ENSCWAG00000018734 #26	ENSCWAG00000018754	ENSCWAG00000018776 #26	ENSCWAG00000018791 #27	ENSCWAG00000018803 #27	ENSCWAG00000018822 #29	ENSCWAG00000018838	TRBV25-1 (ENSCWAG00000018860)	ENSCWAG00000018869
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00940000164718 #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b.q.b #27	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.b.r #27	ENSGT00940000154460.b	ENSGT00940000154270.a.b.q.a #27
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00940000164718 #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b.q.b #27	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.b.q.a #27	ENSGT00940000154460.b	ENSGT00940000154270.a.b.r #27
Cetacea	ANCESTRAL SPECIES	13	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044.hb	ENSGT00940000156154	ENSGT00390000011401.hb #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.b.r #27	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000155819.d	ENSGT00940000163545.a	ENSGT00940000163545.b	ENSGT00940000154542.a.a ##29
Blue whale	MODERN SPECIES	20	SLC37A3 (ENSBMSG00010015373)	RAB19 (ENSBMSG00010015336)	MKRN1 (ENSBMSG00010015275)	ENSBMSG00010015236	ENSBMSG00010015079	ADCK2 (ENSBMSG00010015030)	ENSBMSG00010014979	BRAF (ENSBMSG00010014913)	ENSBMSG00010014857 #7	TMEM178B (ENSBMSG00010014839) #9	AGK (ENSBMSG00010014634) #10	DENND11 (ENSBMSG00010014559) #11	WEE2 (ENSBMSG00010014473) #12	ENSBMSG00010014422 #13	PRSS37 (ENSBMSG00010014322) #16	MGAM (ENSBMSG00010014030) #22	ENSBMSG00010013939	PRSS58 (ENSBMSG00010013894) #23	ENSBMSG00010013865 #24	ENSBMSG00010013824 #25	ENSBMSG00010017998 #27	ENSBMSG00010017982 ##29	ENSBMSG00010017955	ENSBMSG00010017937 #29	ENSBMSG00010017918	ENSBMSG00010017909	ENSBMSG00010017899	ENSBMSG00010017881	ENSBMSG00010017795	ENSBMSG00010017721 ##25	ENSBMSG00010017692
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044.hb	ENSGT00940000156154	ENSGT00390000011401.hb #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.b.r #27	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000155819.d	ENSGT00940000163545.a	ENSGT00940000163545.b	ENSGT00940000154542.a.a ##29	ENSGT00940000154542.a.b ##29
Sperm whale	MODERN SPECIES	16	MKRN1 (ENSPCTG00005001919)	ADCK2 (ENSPCTG00005001907)	DENND2A (ENSPCTG00005001895)	ENSPCTG00005001882	BRAF (ENSPCTG00005001762)	MRPS33 (ENSPCTG00005001712) #7	TMEM178B (ENSPCTG00005001699) #9	AGK (ENSPCTG00005001621) #10	KIAA1147 (ENSPCTG00005001569) #11	WEE2 (ENSPCTG00005001548) #12	ENSPCTG00005001533	SSBP1 (ENSPCTG00005001511) #13	TAS2R4 (ENSPCTG00005001494) #15	PRSS37 (ENSPCTG00005001480) #16	TAS2R38 (ENSPCTG00005001461) #20	MGAM (ENSPCTG00005001373) #22	ENSPCTG00005001338 #24	ENSPCTG00005001323 #25	ENSPCTG00005001310 ##29	ENSPCTG00005001300 #27	ENSPCTG00005001289 #29	ENSPCTG00005001274	ENSPCTG00005001260	ENSPCTG00005001242	ENSPCTG00005001227	ENSPCTG00005001217	ENSPCTG00005001204 ##25	ENSPCTG00005001194	ENSPCTG00005001185	ENSPCTG00005001174	TRBV30 (ENSPCTG00005001164)
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00950000183077.a.a.a.a.a.a	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044.hb	ENSGT00940000156154	ENSGT00390000011401.hb #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.b.r #27	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000163545.a	ENSGT00940000163545.b	ENSGT00940000154542.a.a ##29	ENSGT00940000154542.a.b ##29	ENSGT00940000163595.c.b
Dolphin	MODERN SPECIES	2163																ENSTTRG00000013284 #22	ENSTTRG00000013296	ENSTTRG00000013304	ENSTTRG00000013306 #25
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00950000183077.a.a.a.a.a.a	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044.hb.b	ENSGT00940000156154	ENSGT00390000011401.hb #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.b.r #27	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000163545.a	ENSGT00940000163545.b	ENSGT00940000154542.a.a ##29	ENSGT00940000154542.a.b ##29	ENSGT00940000163595.c.b
Vaquita	MODERN SPECIES	20	RAB19 (ENSPSNG00000016717)	MKRN1 (ENSPSNG00000016640)	DENND2A (ENSPSNG00000016464)	ADCK2 (ENSPSNG00000016397)	ENSPSNG00000016266	BRAF (ENSPSNG00000016141)	ENSPSNG00000016049 #7	TMEM178B (ENSPSNG00000015985) #9	AGK (ENSPSNG00000015653) #10	DENND11 (ENSPSNG00000015409) #11	WEE2 (ENSPSNG00000015224) #12	SSBP1 (ENSPSNG00000015143) #13	TAS2R4 (ENSPSNG00000014812) #15	TAS2R5 (ENSPSNG00000014749) ##14	PRSS37 (ENSPSNG00000014654) #16	MGAM (ENSPSNG00000013851) #22	ENSPSNG00000013730 #24	ENSPSNG00000013190 #25	ENSPSNG00000013078	ENSPSNG00000013034 ##27	ENSPSNG00000012987 ##29	ENSPSNG00000012936 #27	ENSPSNG00000012881 #29	ENSPSNG00000012846	ENSPSNG00000012814	ENSPSNG00000012769 ##29	ENSPSNG00000012684 ##25	ENSPSNG00000012490	ENSPSNG00000012419	TRBV30 (ENSPSNG00000012380)	EPHB6 (ENSPSNG00000012089)
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044.hb.b	ENSGT00940000156154	ENSGT00390000011401.hb #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154460.a	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.b.r #27	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000163545.a	ENSGT00940000163545.b	ENSGT00940000154542.a.a ##29	ENSGT00940000154542.a.b ##29	ENSGT00940000163595.c.b
Beluga whale	MODERN SPECIES	72	RAB19 (ENSDLEG00000021111)	MKRN1 (ENSDLEG00000021109)	DENND2A (ENSDLEG00000021099)	ADCK2 (ENSDLEG00000021096)	ENSDLEG00000021093	BRAF (ENSDLEG00000021077)	MRPS33 (ENSDLEG00000021075) #7	ENSDLEG00000021072 #9	ENSDLEG00000021067 #9	AGK (ENSDLEG00000021057) #10	KIAA1147 (ENSDLEG00000021048) #11	WEE2 (ENSDLEG00000021040) #12	SSBP1 (ENSDLEG00000021032) #13	TAS2R4 (ENSDLEG00000021030) #15	PRSS37 (ENSDLEG00000021026) #16	MGAM (ENSDLEG00000018505) #22	ENSDLEG00000018001	ENSDLEG00000017986 #24	ENSDLEG00000017974 #25	ENSDLEG00000017963	ENSDLEG00000017950 ##27	ENSDLEG00000017940 ##29	ENSDLEG00000017928 #27	ENSDLEG00000017916	ENSDLEG00000017911 #29	ENSDLEG00000017897	ENSDLEG00000017885	ENSDLEG00000017865 ##29	ENSDLEG00000017856 ##29	TRBV27 (ENSDLEG00000017848)	ENSDLEG00000017832
Narwhal	MODERN SPECIES	306	RAB19 (ENSMMNG00015010050)	MKRN1 (ENSMMNG00015010057)	DENND2A (ENSMMNG00015010068)	ADCK2 (ENSMMNG00015010091)	ENSMMNG00015010116	BRAF (ENSMMNG00015010154)	ENSMMNG00015010197 #7	TMEM178B (ENSMMNG00015010207) #9	AGK (ENSMMNG00015010245) #10	DENND11 (ENSMMNG00015010294) #11	WEE2 (ENSMMNG00015010311) #12	SSBP1 (ENSMMNG00015010343) #13	TAS2R3 (ENSMMNG00015010363) #14	TAS2R4 (ENSMMNG00015010372) #15	PRSS37 (ENSMMNG00015010392) #16	MGAM (ENSMMNG00015010883) #22	ENSMMNG00015011527 #25	ENSMMNG00015011580	ENSMMNG00015011598 ##27	ENSMMNG00015011609 ##29	ENSMMNG00015011624	ENSMMNG00015011633 #29	ENSMMNG00015011645	ENSMMNG00015011657	ENSMMNG00015011663	ENSMMNG00015011678 ##29	ENSMMNG00015011688 ##29	ENSMMNG00015011694	ENSMMNG00015011704	ENSMMNG00015011730 ##25	ENSMMNG00015011759
Pecora	ANCESTRAL SPECIES	11	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00940000164718 #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.b.x ##25	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b.q.b #27	ENSGT00940000154542.b.a.c.b ##29	ENSGT00940000154270.b.a ##27	ENSGT00940000154542.b.a.c.a.b ##29	ENSGT00940000154270.b.b ##27
Percora_a	ANCESTRAL SPECIES	11	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00940000164718.b #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.b.x ##25	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b.q.b #27	ENSGT00940000154542.b.a.c.b ##29	ENSGT00940000154542.b.a.c.a.b.a.a.a ##29	ENSGT00940000154270.b.b ##27	ENSGT00940000154542.b.a.c.a.b.a.b ##29
Bovidae	ANCESTRAL SPECIES	12	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00940000164718.b #17	ENSGT00940000164718.a #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.b.x ##25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154542.b.a.c.a.b.a.a.a ##29	ENSGT00940000154270.b.b ##27	ENSGT00940000154542.b.a.c.a.b.a.b ##29	ENSGT00940000154542.b.a.c.a.b.b ##29	ENSGT00940000154270.b.a.b ##27	ENSGT00940000154542.b.a.c.b.a ##29
Bovinae	ANCESTRAL SPECIES	8	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00940000164718.b.a.b #17	ENSGT00940000164718.b.a.a #17	ENSGT00940000164718.a #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.b.x ##25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b.q.b #27	ENSGT00940000154542.b.a.c.b.b.b.a ##29	ENSGT00940000154542.b.a.c.a.b.a.a.a ##29	ENSGT00940000154270.b.b.d.a.b ##27	ENSGT00940000154542.b.a.c.b.b.a ##29	ENSGT00940000154270.b.a.a.a ##27
Bos	ANCESTRAL SPECIES	8	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00940000164718.b.a.a #17	ENSGT00940000164718.a #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.b.x ##25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b.q.b #27	ENSGT00940000154542.b.a.c.b.b.b.a ##29	ENSGT00940000154542.b.a.c.a.b.a.a.a.b ##29	ENSGT00940000154270.b.b.d.a.b ##27	ENSGT00940000154542.b.a.c.b.b.a ##29	ENSGT00940000154270.b.a.a.a ##27
Bos_a	ANCESTRAL SPECIES	108																ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.b.x ##25	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.b.q.b #27	ENSGT00940000154542.b.a.c.b.b.b.a ##29
Domestic yak	MODERN SPECIES	23																MGAM (ENSBGRG00000002093) #22	ENSBGRG00000002368 #21	ENSBGRG00000002406	ENSBGRG00000002460	ENSBGRG00000002499	ENSBGRG00000002506	PRSS58 (ENSBGRG00000002517) #23	ENSBGRG00000002524 #24	ENSBGRG00000002539 ##25	ENSBGRG00000002555 #25	TRBV3-1 (ENSBGRG00000002572)	ENSBGRG00000002580 #26	ENSBGRG00000002588 #27	ENSBGRG00000002605 ##29	ENSBGRG00000002616 ##29	ENSBGRG00000002627 ##29
Wild yak	MODERN SPECIES	2952																ENSBMUG00000012216 #22
Bos_b	ANCESTRAL SPECIES	7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718.b.a.b #17	ENSGT00940000164718.b.a.a #17	ENSGT00940000163413 #18	ENSGT00940000164718.b.b #17	ENSGT00940000164718.a #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.b.x ##25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154542.b.a.c.a.b.a.a.a.b ##29	ENSGT00940000154270.b.b.d.a.b ##27	ENSGT00940000154542.b.a.c.a.b.a.b.b.b ##29	ENSGT00940000154542.b.a.c.b.a.b ##29	ENSGT00940000154542.b.a.c.b.a.a.b ##29	ENSGT00940000154270.b.a.b ##27	ENSGT00940000154460.b.r	ENSGT00940000154270.a.b.q.a #27
Cow	MODERN SPECIES	23	ENSBTAG00000053379 #9	AGK (ENSBTAG00000019265) #10	DENND11 (ENSBTAG00000016879) #11	WEE2 (ENSBTAG00000004658) #12	SSBP1 (ENSBTAG00000010931) #13	TAS2R3 (ENSBTAG00000016880) #14	TAS2R4 (ENSBTAG00000018440) #15	PRSS37 (ENSBTAG00000018442) #16	ENSBTAG00000027341 #24	OR9A4 (ENSBTAG00000054915) #18	OR9A17 (ENSBTAG00000049043) #17	OR9A18 (ENSBTAG00000049592) #17	OR9A7 (ENSBTAG00000048496) #17	CLEC5A (ENSBTAG00000020453) #19	TAS2R38 (ENSBTAG00000024065) #20	MGAM (ENSBTAG00000046152) #22	MOXD2 (ENSBTAG00000003621)	PRSS58 (ENSBTAG00000003628) #23	ENSBTAG00000031236 #24	PRSS1 (ENSBTAG00000052726) ##25	ENSBTAG00000050323 ##25	TRBV3-1 (ENSBTAG00000048852)	ENSBTAG00000031234 #26	ENSBTAG00000053682 ##29	ENSBTAG00000051786 ##27	ENSBTAG00000052008 ##29	ENSBTAG00000050773 ##27	ENSBTAG00000049810 ##29	ENSBTAG00000050745 ##29	ENSBTAG00000040387 ##27	ENSBTAG00000048904 ##29
Hybrid Bos Indicus	MODERN SPECIES	23	ENSBIXG00005030668	AGK (ENSBIXG00005030624) #10	DENND11 (ENSBIXG00005030578) #11	WEE2 (ENSBIXG00005030568) #12	SSBP1 (ENSBIXG00005030556) #13	TAS2R3 (ENSBIXG00005030551) #14	TAS2R4 (ENSBIXG00005030549) #15	PRSS37 (ENSBIXG00005030543) #16	ENSBIXG00005030540 #24	ENSBIXG00005030529 #17	ENSBIXG00005030524 #17	OR9A4 (ENSBIXG00005030521) #18	CLEC5A (ENSBIXG00005030512) #19	TAS2R38 (ENSBIXG00005030506) #20	ENSBIXG00005030502 #21	MGAM (ENSBIXG00005008859) #22	ENSBIXG00005009390	PRSS58 (ENSBIXG00005009415) #23	ENSBIXG00005009425 #24	ENSBIXG00005009443 ##25	TRBV3-1 (ENSBIXG00005009454)	ENSBIXG00005009456 #26	ENSBIXG00005009466 ##29	ENSBIXG00005006709 ##27	ENSBIXG00005009485 ##29	ENSBIXG00005009492 ##29	ENSBIXG00005009515 ##27	ENSBIXG00005000526 ##29	ENSBIXG00005009645 ##29	ENSBIXG00005009669 ##27	ENSBIXG00005009708 ##27
American bison	MODERN SPECIES	3266	MRPS33 (ENSBBBG00000015506) #7	TMEM178B (ENSBBBG00000015500) #9	AGK (ENSBBBG00000015486) #10	DENND11 (ENSBBBG00000015364) #11	WEE2 (ENSBBBG00000015353) #12	SSBP1 (ENSBBBG00000003813) #13	TAS2R3 (ENSBBBG00000015325) #14	TAS2R4 (ENSBBBG00000015322) #15	PRSS37 (ENSBBBG00000001257) #16	OR9A4 (ENSBBBG00000001275) #18	ENSBBBG00000001280 #17	ENSBBBG00000001284 #17	ENSBBBG00000001290 #18	CLEC5A (ENSBBBG00000001296) #19	TAS2R38 (ENSBBBG00000001337) #20	MGAM (ENSBBBG00000001362) #22	ENSBBBG00000015238 #21	ENSBBBG00000003774	ENSBBBG00000015178	PRSS58 (ENSBBBG00000003537) #23	ENSBBBG00000003758 #24	ENSBBBG00000002780 ##25	ENSBBBG00000015132 #26	ENSBBBG00000015129 ##27	ENSBBBG00000015123 ##29	ENSBBBG00000003749 ##29	ENSBBBG00000015105 ##29	ENSBBBG00000003748 ##27	ENSBBBG00000015097 ##29	ENSBBBG00000015095 #26	ENSBBBG00000015092 ##29
Caprinae	ANCESTRAL SPECIES	10	ENSGT00940000156154	ENSGT00390000011401.mb #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718.b #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.b.x ##25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154542.b.a.c.a.b.a.a.a ##29	ENSGT00940000154460.a	ENSGT00940000154542.b.a.c.b.b ##29	ENSGT00940000154270.b.a.a ##27	ENSGT00940000154542.b.a.c.a.a.b.a ##29	ENSGT00940000154542.b.a.d ##29	ENSGT00940000162707.l
Rambouillet Sheep	MODERN SPECIES	20	TMEM178B (ENSOARG00020005515) #9	AGK (ENSOARG00020005551) #10	DENND11 (ENSOARG00020005703) #11	WEE2 (ENSOARG00020005754) #12	SSBP1 (ENSOARG00020005814) #13	TAS2R3 (ENSOARG00020005838) #14	TAS2R4 (ENSOARG00020005852) #15	PRSS37 (ENSOARG00020005886) #16	ENSOARG00020005924 #24	ENSOARG00020005951	OR9A4 (ENSOARG00020005962) #18	OR9A1P (ENSOARG00020000207) #17	ENSOARG00020000219 #18	CLEC5A (ENSOARG00020000250) #19	TAS2R38 (ENSOARG00020000290) #20	MGAM (ENSOARG00020000329) #22	MGAM2 (ENSOARG00020000546) #21	ENSOARG00020000674	PRSS58 (ENSOARG00020000699) #23	ENSOARG00020000720 #24	ENSOARG00020000767 ##25	ENSOARG00020000873 ##25	TRBV3-1 (ENSOARG00020000947)	ENSOARG00020000972	ENSOARG00020000980 ##29	ENSOARG00020000991 ##27	ENSOARG00020000998 ##29	ENSOARG00020001007 ##27	ENSOARG00020001018 ##29	ENSOARG00020001030 ##29	ENSOARG00020001039 ##29
Goat	MODERN SPECIES	23	ENSCHIG00000012235 #9	ENSCHIG00000024421 #9	AGK (ENSCHIG00000023107) #10	DENND11 (ENSCHIG00000015543) #11	ENSCHIG00000018792 #12	ENSCHIG00000014181 #13	TAS2R3 (ENSCHIG00000010773) #14	TAS2R4 (ENSCHIG00000011112) #15	TAS2R5 (ENSCHIG00000013989) ##14	PRSS37 (ENSCHIG00000000473) #16	OR9A4 (ENSCHIG00000021147) #18	ENSCHIG00000007632 #17	ENSCHIG00000008736 #17	CLEC5A (ENSCHIG00000019120) #19	TAS2R38 (ENSCHIG00000010606) #20	MGAM (ENSCHIG00000015947) #22	MGAM2 (ENSCHIG00000015889) #21	ENSCHIG00000025988	ENSCHIG00000018979	PRSS58 (ENSCHIG00000010583) #23	ENSCHIG00000020117 #24	ENSCHIG00000014805 ##25	ENSCHIG00000019528 ##25	TRBV3-1 (ENSCHIG00000009655)	ENSCHIG00000026413 #26	ENSCHIG00000020566 ##29	ENSCHIG00000014383 ##29	ENSCHIG00000025148 ##29	ENSCHIG00000018434 ##27	ENSCHIG00000023799 ##29	ENSCHIG00000013057 ##29
Siberian musk deer	MODERN SPECIES	84	ENSMMSG00000001727	BRAF (ENSMMSG00000001692)	MRPS33 (ENSMMSG00000001665) #7	TMEM178B (ENSMMSG00000001648) #9	AGK (ENSMMSG00000001568) #10	DENND11 (ENSMMSG00000001523) #11	WEE2 (ENSMMSG00000001502) #12	SSBP1 (ENSMMSG00000001484) #13	TAS2R3 (ENSMMSG00000001474) #14	TAS2R4 (ENSMMSG00000001467) #15	PRSS37 (ENSMMSG00000001438) #16	OR9A4 (ENSMMSG00000001426) #18	OR9A1P (ENSMMSG00000001418) #17	CLEC5A (ENSMMSG00000001372) #19	TAS2R38 (ENSMMSG00000001352) #20	MGAM (ENSMMSG00000001266) #22	ENSMMSG00000001157 #21	ENSMMSG00000001130	PRSS58 (ENSMMSG00000001105) #23	ENSMMSG00000001086 #24	ENSMMSG00000001007 ##25	ENSMMSG00000000986 #26	ENSMMSG00000000967 ##29	ENSMMSG00000000949 ##27	ENSMMSG00000000933 ##29	ENSMMSG00000000922 ##29	ENSMMSG00000000906 ##29	ENSMMSG00000000890 ##27	ENSMMSG00000000876 ##29	ENSMMSG00000000859 ##29	ENSMMSG00000000835
Camelidae	ANCESTRAL SPECIES	2	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000164097	ENSGT00940000154270.a.b.q.b #27	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000164371	ENSGT00940000162707	ENSGT00940000164102	ENSGT00940000163545.a	ENSGT00940000162480.b
Arabian camel	MODERN SPECIES	33	RAB19 (ENSCDRG00005003711)	MKRN1 (ENSCDRG00005003742)	DENND2A (ENSCDRG00005003834)	ADCK2 (ENSCDRG00005004011)	NDUFB2 (ENSCDRG00005004074)	BRAF (ENSCDRG00005004131)	MRPS33 (ENSCDRG00005004320) #7	TMEM178B (ENSCDRG00005004347) #9	AGK (ENSCDRG00005004378) #10	DENND11 (ENSCDRG00005004485) #11	WEE2 (ENSCDRG00005004501) #12	SSBP1 (ENSCDRG00005004546) #13	PRSS37 (ENSCDRG00005004595) #16	ENSCDRG00005005393 #19	TAS2R38 (ENSCDRG00005005420) #20	MGAM (ENSCDRG00005005484) #22	ENSCDRG00005005559 #21	ENSCDRG00005005603	ENSCDRG00005005685	PRSS58 (ENSCDRG00005005726) #23	ENSCDRG00005005742 #24	TRBV3-1 (ENSCDRG00005005751)	ENSCDRG00005005756 #27	ENSCDRG00005005773 ##29	ENSCDRG00005005806	ENSCDRG00005005812	ENSCDRG00005005821 #27	ENSCDRG00005005826	ENSCDRG00005005834 #29	ENSCDRG00005005845	ENSCDRG00005005864
Alpaca	MODERN SPECIES	2110									AGK (ENSVPAG00000003677) #10	WEE2 (ENSVPAG00000003678) #12	SSBP1 (ENSVPAG00000003679) #13	TAS2R3 (ENSVPAG00000003682) #14	TAS2R4 (ENSVPAG00000003683) #15	PRSS37 (ENSVPAG00000003685) #16	CLEC5A (ENSVPAG00000003686) #19	ENSVPAG00000003687 #22	TAS2R38 (ENSVPAG00000003688) #20	ENSVPAG00000003690 #21	ENSVPAG00000003691	ENSVPAG00000003692	PRSS58 (ENSVPAG00000003693) #23	ENSVPAG00000003694	ENSVPAG00000003695 ##25
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000162707	ENSGT00940000154270.a.a #28	ENSGT00940000163595.c.a.b.a	ENSGT00940000154460.b
Carnivora	ANCESTRAL SPECIES	15	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413.d #18	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.a.a #28	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000163595.c.a.b.a	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27
Caniformia	ANCESTRAL SPECIES	11	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413.d #18	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000162509 #26	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000164102
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT01030000238403	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413.d #18	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000162509 #26	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000164102
Mustelinae	ANCESTRAL SPECIES	9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT01050000244883.A.a.a.a.b.l.b #25	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000164718 #17	ENSGT00940000163413.d #18	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23
American mink	MODERN SPECIES	3	MRPS33 (ENSNVIG00000021319) #7	ENSNVIG00000021311	TMEM178B (ENSNVIG00000021305) #9	AGK (ENSNVIG00000021096) #10	DENND11 (ENSNVIG00000021077) #11	WEE2 (ENSNVIG00000021053) #12	SSBP (ENSNVIG00000021026) #13	TAS2R3 (ENSNVIG00000021023) #14	TAS2R4 (ENSNVIG00000021019) #15	TAS2R5 (ENSNVIG00000021015) ##14	PRSS37 (ENSNVIG00000021001) #16	OR9A1P (ENSNVIG00000021000) #17	OR9A4 (ENSNVIG00000020980) #18	CLEC5A (ENSNVIG00000020950) #19	TAS2R38 (ENSNVIG00000020941) #20	MGAM (ENSNVIG00000020823) #22	ENSNVIG00000020796 #21	ENSNVIG00000020758	ENSNVIG00000020745	PRSS58 (ENSNVIG00000020715) #23	ENSNVIG00000020711 #24	ENSNVIG00000020082 #25	ENSNVIG00000020034 #25	ENSNVIG00000020010 #25	ENSNVIG00000019978	ENSNVIG00000019966	ENSNVIG00000019959 #28	ENSNVIG00000019948	ENSNVIG00000019937 #27	ENSNVIG00000019931	ENSNVIG00000019921 #29
Ferret	MODERN SPECIES	168	TMEM178B (ENSMPUG00000003400) #9	ENSMPUG00000003395	AGK (ENSMPUG00000003382) #10	DENND11 (ENSMPUG00000003339) #11	WEE2 (ENSMPUG00000003262) #12	SSBP1 (ENSMPUG00000003257) #13	TAS2R3 (ENSMPUG00000018738) #14	TAS2R5 (ENSMPUG00000018736) ##14	PRSS37 (ENSMPUG00000003229) #16	ENSMPUG00000003225 #24	OR9A1P (ENSMPUG00000018734) #17	ENSMPUG00000018733 #18	ENSMPUG00000018730 #18	CLEC5A (ENSMPUG00000003222) #19	TAS2R38 (ENSMPUG00000018729) #20	MGAM (ENSMPUG00000003017) #22	ENSMPUG00000003013 #21	ENSMPUG00000003007	ENSMPUG00000003004	ENSMPUG00000002940	PRSS58 (ENSMPUG00000002936) #23
Ursidae	ANCESTRAL SPECIES	12	ENSGT00390000002796.`b #13	ENSGT00390000002796.ab #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163595.c.a.b.a	ENSGT00940000154460.a	ENSGT01050000244883.A.a.a.a.b.l.c #25	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000163413.d #18	ENSGT00940000164718 #17	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23
Ursus	ANCESTRAL SPECIES	35	ENSGT01030000238403	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796.`b #13	ENSGT00390000002796.ab #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l.c.c #25	ENSGT01050000244883.A.a.a.a.b.l.c.d #25	ENSGT00940000162509.u #26	ENSGT00940000162509.v #26	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b.v	ENSGT00940000163595.c.a.b.a	ENSGT00940000154460.b.u	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.b #29
Polar bear	MODERN SPECIES	205	ENSUMAG00000015014	TMEM178B (ENSUMAG00000015005) #9	AGK (ENSUMAG00000014998) #10	DENND11 (ENSUMAG00000014996) #11	WEE2 (ENSUMAG00000014990) #12	ENSUMAG00000014987 #13	TAS2R3 (ENSUMAG00000014985) #14	TAS2R4 (ENSUMAG00000014982) #15	TAS2R5 (ENSUMAG00000014980) ##14	PRSS37 (ENSUMAG00000014967) #16	ENSUMAG00000014960 #24	OR9A1P (ENSUMAG00000014949) #17	OR9A4 (ENSUMAG00000014934) #18	CLEC5A (ENSUMAG00000014912) #19	TAS2R38 (ENSUMAG00000014900) #20	MGAM (ENSUMAG00000012557) #22	ENSUMAG00000012289	ENSUMAG00000012286	PRSS58 (ENSUMAG00000012282) #23	ENSUMAG00000012275 #24	ENSUMAG00000012263 #25	ENSUMAG00000012255 #25	ENSUMAG00000012251 #26	ENSUMAG00000012249 #26	ENSUMAG00000012247 #28	ENSUMAG00000012245 ##29	ENSUMAG00000012243	ENSUMAG00000012241	ENSUMAG00000012239	ENSUMAG00000012236	ENSUMAG00000012235
American black bear	MODERN SPECIES	2465													ENSUAMG00000026644 #18	CLEC5A (ENSUAMG00000026642) #19	TAS2R38 (ENSUAMG00000026640) #20	MGAM (ENSUAMG00000025773) #22
Giant Panda	MODERN SPECIES		NDUFB2 (ENSAMEG00000015328)	BRAF (ENSAMEG00000015264)	MRPS33 (ENSAMEG00000015259) #7	TMEM178B (ENSAMEG00000029552) #9	ENSAMEG00000015205 #10	DENND11 (ENSAMEG00000015190) #11	WEE2 (ENSAMEG00000015162) #12	SSBP1 (ENSAMEG00000015145) #13	TAS2R3 (ENSAMEG00000019797) #14	TAS2R4 (ENSAMEG00000019793) #15	PRSS37 (ENSAMEG00000015123) #16	ENSAMEG00000015114 #24	OR9A4 (ENSAMEG00000028272) #18	CLEC5A (ENSAMEG00000024594) #19	TAS2R38 (ENSAMEG00000015098) #20	ENSAMEG00000014965 #22	ENSAMEG00000014963 #21	ENSAMEG00000014918	ENSAMEG00000028202	PRSS58 (ENSAMEG00000014895) #23	ENSAMEG00000014890 #24	ENSAMEG00000006287 #25	TRBV2 (ENSAMEG00000023747)	ENSAMEG00000024454	ENSAMEG00000025419 #28	ENSAMEG00000006297	TRBV13 (ENSAMEG00000025819) #27	ENSAMEG00000006306 #29	ENSAMEG00000028033	ENSAMEG00000006308	ENSAMEG00000025343
Canidae	ANCESTRAL SPECIES	49	ENSGT00390000011401.bb #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796.z #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413.d #18	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000162509.y #26	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000164102	ENSGT00940000155819.d
Canis_lupus	ANCESTRAL SPECIES	42	ENSGT00390000011401.bb #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796.z #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413.d #18	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000162509.y.a #26	ENSGT00940000164097	ENSGT00940000162509.z #26	ENSGT00940000154270.a.a #28	ENSGT00940000154460.b	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000164102
Dingo	MODERN SPECIES	389	BRAF (ENSCAFG00020021321)	ENSCAFG00020021206 #7	TMEM178B (ENSCAFG00020021193) #9	AGK (ENSCAFG00020021182) #10	DENND11 (ENSCAFG00020021162) #11	WEE2 (ENSCAFG00020021149) #12	SSBP1 (ENSCAFG00020021147) #13	TAS2R3 (ENSCAFG00020021146) #14	TAS2R4 (ENSCAFG00020021144) #15	TAS2R5 (ENSCAFG00020021140) ##14	PRSS37 (ENSCAFG00020021120) #16	OR9A1P (ENSCAFG00020021109) #17	ENSCAFG00020021108 #18	ENSCAFG00020021104 #18	TAS2R38 (ENSCAFG00020021100) #20	MGAM (ENSCAFG00020021057) #22	ENSCAFG00020021052	ENSCAFG00020021050	PRSS58 (ENSCAFG00020021048) #23	ENSCAFG00020021045 #24	ENSCAFG00020021043 #25	ENSCAFG00020021042 #26	ENSCAFG00020021040	TRBV9 (ENSCAFG00020021039) #28	ENSCAFG00020021036	ENSCAFG00020021033 #27	ENSCAFG00020021030 #29	ENSCAFG00020021027	ENSCAFG00020021025	ENSCAFG00020021022	TRBV19 (ENSCAFG00020021016)
Dog	MODERN SPECIES	7	MRPS33 (ENSCAFG00845031033) #7	TMEM178B (ENSCAFG00845031029) #9	AGK (ENSCAFG00845030997) #10	DENND11 (ENSCAFG00845030968) #11	WEE2 (ENSCAFG00845030950) #12	SSBP1 (ENSCAFG00845030936) #13	TAS2R3 (ENSCAFG00845030932) #14	TAS2R4 (ENSCAFG00845030928) #15	TAS2R5 (ENSCAFG00845030924) ##14	PRSS37 (ENSCAFG00845030911) #16	ENSCAFG00845030869 #24	OR9A4C (ENSCAFG00845030848) #18	OR9A4 (ENSCAFG00845030840) #18	ENSCAFG00845030818 #19	TAS2R38 (ENSCAFG00845030800) #20	MGAM (ENSCAFG00845024416) #22	MGAM2 (ENSCAFG00845020250) #21	MOXD2 (ENSCAFG00845020081)	ENSCAFG00845020044	PRSS58 (ENSCAFG00845019999) #23	ENSCAFG00845019855 #24	ENSCAFG00845019799 #25	ENSCAFG00845019762 #26	ENSCAFG00845019728 #26	ENSCAFG00845019649	ENSCAFG00845019562 #26	TRBV9 (ENSCAFG00845019511) #28	ENSCAFG00845019478	ENSCAFG00845019438 #27	ENSCAFG00845019384	ENSCAFG00845019356
Red fox	MODERN SPECIES	167	RAB19 (ENSVVUG00000001737)	MKRN1 (ENSVVUG00000001720)	DENND2A (ENSVVUG00000001629)	ADCK2 (ENSVVUG00000001594)	NDUFB2 (ENSVVUG00000001582)	BRAF (ENSVVUG00000001562)	MRPS33 (ENSVVUG00000001526) #7	TMEM178B (ENSVVUG00000001378) #9	AGK (ENSVVUG00000027904) #10	DENND11 (ENSVVUG00000027896) #11	WEE2 (ENSVVUG00000027893) #12	PRSS37 (ENSVVUG00000027887) #16	SSBP1 (ENSVVUG00000027882) #13	CLEC5A (ENSVVUG00000027880) #19	TAS2R38 (ENSVVUG00000027879) #20	MGAM (ENSVVUG00000027858) #22	MGAM2 (ENSVVUG00000027701) #21	ENSVVUG00000027677	ENSVVUG00000027675	PRSS58 (ENSVVUG00000027673) #23	ENSVVUG00000027672 #24	ENSVVUG00000027670 #25	ENSVVUG00000027667 #26	ENSVVUG00000027666 #26	ENSVVUG00000027664 #26	ENSVVUG00000027663 #28	ENSVVUG00000027660 ##29	ENSVVUG00000027659	ENSVVUG00000027656 #27	ENSVVUG00000027654 #29	ENSVVUG00000027651
Felidae	ANCESTRAL SPECIES	13	ENSGT00940000156154	ENSGT00390000017491.t.u.k	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000163595.c.a.b.a	ENSGT00940000154270.a.b #27	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000162707
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000156154	ENSGT00390000017491.t.u.k	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000163595.c.a.b.a	ENSGT00940000154270.a.b #27	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000162707
Tiger	MODERN SPECIES	338					ENSPTIG00000006995 #9	AGK (ENSPTIG00000007059) #10	DENND11 (ENSPTIG00000007425) #11	WEE2 (ENSPTIG00000007441) #12	SSBP1 (ENSPTIG00000007543) #13	TAS2R3 (ENSPTIG00000008623) #14	PRSS37 (ENSPTIG00000007671) #16	OR9A1P (ENSPTIG00000008631) #17	OR9A4 (ENSPTIG00000008641) #18	CLEC5A (ENSPTIG00000007743) #19	TAS2R38 (ENSPTIG00000008646) #20	MGAM (ENSPTIG00000007791) #22	MGAM2 (ENSPTIG00000007875) #21	ENSPTIG00000007941	ENSPTIG00000007959	PRSS58 (ENSPTIG00000007966) #23	ENSPTIG00000007980 #24	ENSPTIG00000007990 #25	ENSPTIG00000007999 ##29	ENSPTIG00000008004	ENSPTIG00000008008	ENSPTIG00000008018 ##25	EPHB6 (ENSPTIG00000008034)	TRPV6 (ENSPTIG00000008093)	TRPV5 (ENSPTIG00000008125)	LLCFC1 (ENSPTIG00000008144)	KEL (ENSPTIG00000008152)
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000017491.t.u.k	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT00940000161483 #16	ENSGT00940000163413.d #18	ENSGT00940000164718 #17	ENSGT00940000163413.c #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000162509 #26	ENSGT00940000154270.b ##27	ENSGT00940000154542.b.a ##29	ENSGT00940000163595.c.a.b.a	ENSGT00940000154270.a.b #27	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000162707
leopard	MODERN SPECIES	23	NDUFB2 (ENSPPRG00000024808)	BRAF (ENSPPRG00000024821)	ENSPPRG00000024823	MRPS33 (ENSPPRG00000024825) #7	TMEM178B (ENSPPRG00000024828) #9	ENSPPRG00000024832 #10	DENND11 (ENSPPRG00000024839) #11	WEE2 (ENSPPRG00000024844) #12	SSBP1 (ENSPPRG00000024849) #13	TAS2R3 (ENSPPRG00000019421) #14	TAS2R4 (ENSPPRG00000019408) #15	PRSS37 (ENSPPRG00000024857) #16	ENSPPRG00000019397 #18	ENSPPRG00000019380 #18	CLEC5A (ENSPPRG00000024864) #19	MGAM (ENSPPRG00000024877) #22	MGAM2 (ENSPPRG00000024888) #21	ENSPPRG00000024900	ENSPPRG00000019361	PRSS58 (ENSPPRG00000024903) #23	ENSPPRG00000024907 #24	ENSPPRG00000024914 #25	ENSPPRG00000024917 ##29	ENSPPRG00000019350	ENSPPRG00000024919 ##25	ENSPPRG00000024923	ENSPPRG00000024929	EPHB6 (ENSPPRG00000024931)	TRPV6 (ENSPPRG00000024934)	TRPV5 (ENSPPRG00000024936)	LLCFC1 (ENSPPRG00000024938)
lion	MODERN SPECIES	2	ENSPLOG00000006711	MRPS33 (ENSPLOG00000006727) #7	TMEM178B (ENSPLOG00000006748) #9	AGK (ENSPLOG00000006870) #10	DENND11 (ENSPLOG00000007062) #11	WEE2 (ENSPLOG00000007110) #12	SSBP1 (ENSPLOG00000007153) #13	TAS2R3 (ENSPLOG00000007169) #14	TAS2R4 (ENSPLOG00000007183) #15	PRSS37 (ENSPLOG00000007202) #16	ENSPLOG00000007235 #17	ENSPLOG00000007265 #17	OR9A4 (ENSPLOG00000007287) #18	CLEC5A (ENSPLOG00000007322) #19	TAS2R38 (ENSPLOG00000007379) #20	MGAM (ENSPLOG00000007975) #22	ENSPLOG00000010301 #21	ENSPLOG00000010372	ENSPLOG00000010445	PRSS58 (ENSPLOG00000010461) #23	ENSPLOG00000010506 #24	ENSPLOG00000010541 #25	ENSPLOG00000010588	ENSPLOG00000010616 #26	ENSPLOG00000010644 ##27	ENSPLOG00000010673 ##29	ENSPLOG00000010692	ENSPLOG00000010713 #27	ENSPLOG00000010744	ENSPLOG00000010767 #29	ENSPLOG00000010793
Cat	MODERN SPECIES	1	ADCK2 (ENSFCAG00000028490)	NDUFB2 (ENSFCAG00000036666)	BRAF (ENSFCAG00000012847)	ENSFCAG00000034313	MRPS33 (ENSFCAG00000029690) #7	TMEM178B (ENSFCAG00000040899) #9	AGK (ENSFCAG00000005448) #10	DENND11 (ENSFCAG00000018973) #11	WEE2 (ENSFCAG00000018517) #12	ENSFCAG00000035640 #13	PRSS37 (ENSFCAG00000006573) #16	OR9A1P (ENSFCAG00000042976) #17	OR9A4 (ENSFCAG00000046309) #18	CLEC5A (ENSFCAG00000008023) #19	TAS2R38 (ENSFCAG00000023407) #20	MGAM (ENSFCAG00000024379) #22	ENSFCAG00000018949 #25	ENSFCAG00000022750 #21	MOXD2 (ENSFCAG00000051435)	ENSFCAG00000028392	PRSS58 (ENSFCAG00000001368) #23	ENSFCAG00000024016 #24	ENSFCAG00000052478 ##27	ENSFCAG00000049851 ##29	ENSFCAG00000050333	ENSFCAG00000053305 #27	ENSFCAG00000024642	ENSFCAG00000046864 #29	ENSFCAG00000038741	ENSFCAG00000053186	ENSFCAG00000051170
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000154270.b ##27	ENSGT00940000162509 #26	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.b #27	ENSGT00940000154542.b.b #29	ENSGT00940000162707	ENSGT00940000154270.a.a #28	ENSGT00940000163595.c.a.b.a	ENSGT00940000154460.b
Chiroptera	ANCESTRAL SPECIES	57	ENSGT00940000155819.c.b	ENSGT00940000154460.a	ENSGT00940000164102	ENSGT00940000162707	ENSGT00940000164371	ENSGT00940000161483 #16	ENSGT00940000154460.b	ENSGT00940000154542.b.a ##29	ENSGT00940000154270.a.a #28	ENSGT00940000164097	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00940000164718 #17	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23
Microchiroptera	ANCESTRAL SPECIES	23	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00910000144330 #19	ENSGT01100000263477.A.a.a #20	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097	ENSGT00940000154270.a.a #28	ENSGT00940000154542.b.a ##29	ENSGT00940000154460.b	ENSGT00940000154542.b.b #29	ENSGT00940000154270.a.b #27	ENSGT00940000164371	ENSGT00940000162707	ENSGT00940000164102
Microbat	MODERN SPECIES	1078	ENSMLUG00000030661	ENSMLUG00000007083	ENSMLUG00000030506 #9	AGK (ENSMLUG00000007092) #10	DENND11 (ENSMLUG00000007121) #11	WEE2 (ENSMLUG00000029750) #12	SSBP1 (ENSMLUG00000007133) #13	TAS2R3 (ENSMLUG00000007928) #14	TAS2R4 (ENSMLUG00000028078) #15	TAS2R5 (ENSMLUG00000006021) ##14	PRSS37 (ENSMLUG00000006019) #16	ENSMLUG00000023258 #24	OR9A1P (ENSMLUG00000027938) #17	CLEC5A (ENSMLUG00000017259) #19	TAS2R38 (ENSMLUG00000013296) #20	MGAM (ENSMLUG00000017263) #22	ENSMLUG00000008548	ENSMLUG00000029346	PRSS58 (ENSMLUG00000016816) #23	ENSMLUG00000029306 #24	ENSMLUG00000024021 #25	ENSMLUG00000022214 ##27	ENSMLUG00000022547 ##27	ENSMLUG00000022277 #26	ENSMLUG00000026383 ##29	ENSMLUG00000029669	ENSMLUG00000028945	ENSMLUG00000022950 #29	ENSMLUG00000027541 #27	ENSMLUG00000023189	ENSMLUG00000024922
Greater horseshoe bat	MODERN SPECIES	18	ADCK2 (ENSRFEG00010020985)	ENSRFEG00010020971	NDUFB2 (ENSRFEG00010020950)	BRAF (ENSRFEG00010020876)	MRPS33 (ENSRFEG00010020851) #7	TMEM178B (ENSRFEG00010020840) #9	AGK (ENSRFEG00010020764) #10	DENND11 (ENSRFEG00010020723) #11	WEE2 (ENSRFEG00010020683) #12	SSBP1 (ENSRFEG00010020645) #13	TAS2R3 (ENSRFEG00010020628) #14	TAS2R4 (ENSRFEG00010020619) #15	PRSS37 (ENSRFEG00010020580) #16	CLEC5A (ENSRFEG00010020445) #19	TAS2R38 (ENSRFEG00010020417) #20	MGAM (ENSRFEG00010011361) #22	ENSRFEG00010010486 #21	ENSRFEG00010010272	ENSRFEG00010010246	PRSS58 (ENSRFEG00010010194) #23	ENSRFEG00010010175 #24	ENSRFEG00010010153 #25	TRBV3-1 (ENSRFEG00010010134)	TRBV9 (ENSRFEG00010010109) #28	ENSRFEG00010010095 ##29	ENSRFEG00010010067 #27	ENSRFEG00010010024	ENSRFEG00010009993	TRBV15 (ENSRFEG00010009970)	ENSRFEG00010009940	ENSRFEG00010009888
Equus	ANCESTRAL SPECIES	13	ENSGT00950000183077.a.a.a.a.a.a	ENSGT00950000182931.B.a.a	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT00940000161483 #16	ENSGT00940000164718 #17	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22	ENSGT00940000163091 #21	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT00730000111153.oc	ENSGT01050000244883.A.a.a.a.a.d ##25	ENSGT00940000162480.a.d.a	ENSGT00940000163595.c.b.b	ENSGT01050000244883.A.a.a.a.b.l #25	ENSGT00940000164097.h.b	ENSGT00940000154460.a.bb	ENSGT00940000154270.a.a.a.b #28	ENSGT00940000154542.b.a.a.a.a ##29	ENSGT00940000163595.c.a.b.a.a.b	ENSGT00940000154460.b.z.b
Horse	MODERN SPECIES	25	DENND2A (ENSECAG00000020307)	ADCK2 (ENSECAG00000023917)	BRAF (ENSECAG00000002746)	MRPS33 (ENSECAG00000013649) #7	ENSECAG00000014200 #9	ENSECAG00000054503	ENSECAG00000029769	AGK (ENSECAG00000014211) #10	ENSECAG00000050131	DENND11 (ENSECAG00000019877) #11	WEE2 (ENSECAG00000021800) #12	SSBP1 (ENSECAG00000004023) #24	PRSS37 (ENSECAG00000007637) #16	OR9A4 (ENSECAG00000008580) #18	CLEC5A (ENSECAG00000008727) #19	MGAM (ENSECAG00000009647) #22	MGAM2 (ENSECAG00000010940) #21	MOXD2 (ENSECAG00000011824)	PRSS58 (ENSECAG00000013602) #23	ENSECAG00000013335	ENSECAG00000014434 #24	ENSECAG00000029148 ##25	ENSECAG00000039223 #25	ENSECAG00000033380 ##25	ENSECAG00000033873 #25	ENSECAG00000056166	ENSECAG00000022772	ENSECAG00000027848 #28	ENSECAG00000053121	ENSECAG00000006164 ##29	ENSECAG00000000647
Donkey	MODERN SPECIES		DENND2A (ENSEASG00005009911)	ADCK2 (ENSEASG00005009907)	NDUFB2 (ENSEASG00005009906)	BRAF (ENSEASG00005009899)	MRPS33 (ENSEASG00005009896) #7	TMEM178B (ENSEASG00005009886) #9	ENSEASG00005009882	AGK (ENSEASG00005009879) #10	DENND11 (ENSEASG00005009876) #11	WEE2 (ENSEASG00005009874) #12	ENSEASG00005009871 #13	PRSS37 (ENSEASG00005009865) #16	OR9A1P (ENSEASG00005032409) #17	OR9A4 (ENSEASG00005033752) #18	CLEC5A (ENSEASG00005009851) #19	ENSEASG00005009837 #22	MGAM2 (ENSEASG00005030719) #21	ENSEASG00005009818	ENSEASG00005030688	PRSS58 (ENSEASG00005009810) #23	ENSEASG00005009806 #24	ENSEASG00005035145 ##25	ENSEASG00005036533 ##25	ENSEASG00005009470 #25	ENSEASG00005031156	ENSEASG00005036725	ENSEASG00005009455 #28	ENSEASG00005026717 ##29	ENSEASG00005030282	ENSEASG00005009449	ENSEASG00005009447 #29
Atlantogenata	ANCESTRAL SPECIES	60	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b #25	ENSGT00940000162509 #26	ENSGT00940000154460.a	ENSGT00940000163545.a	ENSGT00530000064313.b	ENSGT00940000155819.c.a	ENSGT00940000155819.c.b	ENSGT00940000154542.a.a ##29	ENSGT00940000163595.c.b	ENSGT00940000162480.a	ENSGT00530000064313.a	ENSGT01050000244883.A.a.a.a.a ##25
Xenarthra	ANCESTRAL SPECIES	1273																ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01050000244883.A.a.a.a.b #25
Armadillo	MODERN SPECIES	1843																ENSDNOG00000046694 #22	ENSDNOG00000047803	ENSDNOG00000036428 #23	ENSDNOG00000037492 #25	ENSDNOG00000039085 #26
Afrotheria	ANCESTRAL SPECIES	81	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b #25	ENSGT00940000162509 #26	ENSGT00940000154542.b #29	ENSGT00940000154460.b	ENSGT00940000162707	ENSGT00940000155819.c.a.j	ENSGT00940000164297	ENSGT00940000163595.d	ENSGT01050000244883.A.a.a.a.a ##25	ENSGT00730000111153	ENSGT00440000034680	ENSGT00940000160399
Afrotheria_a	ANCESTRAL SPECIES	82	ENSGT00390000001536	ENSGT00390000004044	ENSGT00940000156154	ENSGT00390000011401 #7	ENSGT00390000015299.a.b.b.a #9	ENSGT00940000154961 #10	ENSGT00590000083189 #11	ENSGT00940000158803 #12	ENSGT00390000002796 #13	ENSGT01100000263477.A.b.b #14	ENSGT01100000263477.C #15	ENSGT01100000263477.A.a.b ##14	ENSGT00940000161483 #16	ENSGT00940000163413 #18	ENSGT00910000144330 #19	ENSGT00940000161540 #22	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b #23	ENSGT01020000230389.b.a.a.a.a #24	ENSGT01050000244883.A.a.a.a.b #25	ENSGT00940000162509 #26	ENSGT00940000154542.b #29	ENSGT00940000154460.b	ENSGT00940000162707	ENSGT00940000155819.c.a.j	ENSGT00940000164297	ENSGT00940000163595.d	ENSGT01050000244883.A.a.a.a.a ##25	ENSGT00730000111153	ENSGT00440000034680	ENSGT00940000160399
Elephant	MODERN SPECIES	578	DENND2A (ENSLAFG00000013759)	ADCK2 (ENSLAFG00000021772)	NDUFB2 (ENSLAFG00000009098)	BRAF (ENSLAFG00000016753)	MRPS33 (ENSLAFG00000002433) #7	ENSLAFG00000026888 #9	AGK (ENSLAFG00000002479) #10	DENND11 (ENSLAFG00000011516) #11	WEE2 (ENSLAFG00000011523) #12	SSBP1 (ENSLAFG00000011526) #13	TAS2R3 (ENSLAFG00000011535) #14	TAS2R4 (ENSLAFG00000016501) #15	PRSS37 (ENSLAFG00000011538) #16	OR9A4 (ENSLAFG00000021730) #18	CLEC5A (ENSLAFG00000018406) #19	MGAM (ENSLAFG00000021508) #22	ENSLAFG00000016635	PRSS58 (ENSLAFG00000018442) #23	ENSLAFG00000013135 #24	ENSLAFG00000022480 #25	ENSLAFG00000028007 #25	ENSLAFG00000028520 #25	ENSLAFG00000020847 #25	ENSLAFG00000020776 #25	ENSLAFG00000028593 #26	ENSLAFG00000030766 #29	ENSLAFG00000029791 #29	ENSLAFG00000029143	ENSLAFG00000028455	ENSLAFG00000030997 #29	ENSLAFG00000028086 #29
Tenrec	MODERN SPECIES	7107																ENSETEG00000016401 #22