Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000158630 #8	ENSGT00390000015583 #9	ENSGT00940000155032 #10	ENSGT00390000015287.h #11	ENSGT00950000182926.b.d.d #12	ENSGT00390000013106 #13	ENSGT00390000007081.a #14	ENSGT00390000007081.b.a ##14	ENSGT00940000157331 #15	ENSGT00940000157322.a #16	ENSGT00860000135870 #17	ENSGT00940000154965.A #18	ENSGT00940000162611.a #19	ENSGT00390000008787.b #20	ENSGT00940000155493 #21	ENSGT00940000160572 #22	ENSGT00390000009395 #23	ENSGT00940000158584 #24	ENSGT00940000155715 #25	ENSGT00940000162006 #26	ENSGT00940000156981 #27	ENSGT00940000156590	ENSGT01100000263542.C #28	ENSGT00570000079101.a.a #29	ENSGT00500000044903 #30	ENSGT00940000158658 #31	ENSGT00940000155525.q #32	ENSGT00940000162654.b #33	ENSGT00940000155736.D.g.b.c.a.a #34	ENSGT00940000154299.h.b.a	ENSGT00940000162913.a.b
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000158630 #8	ENSGT00390000015583 #9	ENSGT00940000155032 #10	ENSGT00390000015287.h #11	ENSGT00950000182926.b.d.d #12	ENSGT00390000013106 #13	ENSGT00390000007081.a #14	ENSGT00390000007081.b.a ##14	ENSGT00940000157331 #15	ENSGT00940000157322.a #16	ENSGT00860000135870 #17	ENSGT00940000154965.A #18	ENSGT00940000162611.a #19	ENSGT00390000008787.b #20	ENSGT00940000155493 #21	ENSGT00940000160572 #22	ENSGT00390000009395 #23	ENSGT00940000158584 #24	ENSGT00940000155715 #25	ENSGT00940000162006 #26	ENSGT00940000156981 #27	ENSGT00940000156590	ENSGT01100000263542.C #28	ENSGT00570000079101.a.a #29	ENSGT00500000044903 #30	ENSGT00940000158658 #31	ENSGT00940000155525.q #32	ENSGT00940000162654.b #33	ENSGT00940000155736.D.g.b.c.a.a #34	ENSGT00940000155736.D.g.b.d #37	ENSGT00940000155736.D.g.a.d.a ##34
Mus_C	ANCESTRAL SPECIES	24	ENSGT00940000158630 #8	ENSGT00390000015583 #9	ENSGT00940000155032 #10	ENSGT00390000015287.h #11	ENSGT00950000182926.b.d.d #12	ENSGT00390000013106 #13	ENSGT00390000007081.a #14	ENSGT00390000007081.b.a ##14	ENSGT00940000157331 #15	ENSGT00940000157322.a #16	ENSGT00860000135870 #17	ENSGT00940000154965.A #18	ENSGT00940000162611.a #19	ENSGT00390000008787.b #20	ENSGT00940000155493 #21	ENSGT00940000160572 #22	ENSGT00390000009395 #23	ENSGT00940000158584 #24	ENSGT00940000155715 #25	ENSGT00940000162006 #26	ENSGT00940000156981 #27	ENSGT00940000156590	ENSGT01100000263542.C #28	ENSGT00570000079101.a.a #29	ENSGT00500000044903 #30	ENSGT00940000158658 #31	ENSGT00940000155525.q #32	ENSGT00940000162654.b #33	ENSGT00940000155736.D.g.b.c.a.a #34	ENSGT00940000155736.D.g.b.d #37	ENSGT00940000155736.D.g.a.d.a ##34
spretus	MODERN SPECIES	10	Ankrd2 (MGP_SPRETEiJ_G0023884) #7	Ubtd1 (MGP_SPRETEiJ_G0023883) #8	Mms19 (MGP_SPRETEiJ_G0023882) #9	Zdhhc16 (MGP_SPRETEiJ_G0023881) #10	Exosc1 (MGP_SPRETEiJ_G0023880) #11	Pgam1 (MGP_SPRETEiJ_G0023879) #12	Rrp12 (MGP_SPRETEiJ_G0023878) #13	Frat2 (MGP_SPRETEiJ_G0023877) #14	Arhgap19 (MGP_SPRETEiJ_G0023876) #15	Slit1 (MGP_SPRETEiJ_G0023875) #16	MGP_SPRETEiJ_G0023874 #17	MGP_SPRETEiJ_G0023873 #18	MGP_SPRETEiJ_G0023872 #19	Pik3ap1 (MGP_SPRETEiJ_G0023871) #20	Tm9sf3 (MGP_SPRETEiJ_G0023870) #21	Tll2 (MGP_SPRETEiJ_G0023869) #22	Opalin (MGP_SPRETEiJ_G0023868) #23	Dntt (MGP_SPRETEiJ_G0023867) #24	Blnk (MGP_SPRETEiJ_G0023866) #25	Zfp518a (MGP_SPRETEiJ_G0023865) #26	Ccnj (MGP_SPRETEiJ_G0023864) #27	Entpd1 (MGP_SPRETEiJ_G0023863) #28	Tctn3 (MGP_SPRETEiJ_G0023862) #29	Aldh18a1 (MGP_SPRETEiJ_G0023861) #30	MGP_SPRETEiJ_G0023860 #31	Pdlim1 (MGP_SPRETEiJ_G0023859) #32	Cyp2c70 (MGP_SPRETEiJ_G0023858) #33	Cyp2c50 (MGP_SPRETEiJ_G0023857) #34	Cyp2c54 (MGP_SPRETEiJ_G0023856) #35	MGP_SPRETEiJ_G0023855 #36	MGP_SPRETEiJ_G0023854 #37
Steppe mouse	MODERN SPECIES	3102	Ankrd2 (ENSMSIG00000016098) #7	Ubtd1 (ENSMSIG00000016084) #8	Mms19 (ENSMSIG00000015819) #9	Zdhhc16 (ENSMSIG00000015766) #10	Exosc1 (ENSMSIG00000015679) #11	ENSMSIG00000015664 #12	Rrp12 (ENSMSIG00000015566) #13	Frat2 (ENSMSIG00000015557) #14	Frat1 (ENSMSIG00000015552) ##14	Arhgap19 (ENSMSIG00000015456) #15	Slit1 (ENSMSIG00000015311) #16	ENSMSIG00000015301 #17	Lcor (ENSMSIG00000015282) #18	Pik3ap1 (ENSMSIG00000015191) #20	Tm9sf3 (ENSMSIG00000015141) #21	Tll2 (ENSMSIG00000015085) #22	ENSMSIG00000015036 #23	Dntt (ENSMSIG00000014961) #24
Mouse	MODERN SPECIES	10	Hoga1 (ENSMUSG00000025176)	Ankrd2 (ENSMUSG00000025172) #7	Ubtd1 (ENSMUSG00000025171) #8	Mms19 (ENSMUSG00000025159) #9	Zdhhc16 (ENSMUSG00000025157) #10	Exosc1 (ENSMUSG00000034321) #11	Pgam1 (ENSMUSG00000011752) #12	Rrp12 (ENSMUSG00000035049) #13	Frat2 (ENSMUSG00000047604) #14	Frat1 (ENSMUSG00000067199) ##14	Arhgap19 (ENSMUSG00000025154) #15	Slit1 (ENSMUSG00000025020) #16	Lcor (ENSMUSG00000025019) #18	Pik3ap1 (ENSMUSG00000025017) #20	Tm9sf3 (ENSMUSG00000025016) #21	Tll2 (ENSMUSG00000025013) #22	Opalin (ENSMUSG00000050121) #23	Dntt (ENSMUSG00000025014) #24	Blnk (ENSMUSG00000061132) #25	Zfp518a (ENSMUSG00000049164) #26	Ccnj (ENSMUSG00000025010) #27	Cc2d2b (ENSMUSG00000108929)	Entpd1 (ENSMUSG00000048120) #28	Tctn3 (ENSMUSG00000025008) #29	Aldh18a1 (ENSMUSG00000025007) #30	Sorbs1 (ENSMUSG00000025006) #31	Pdlim1 (ENSMUSG00000055044) #32	Cyp2c70 (ENSMUSG00000060613) #33	Cyp2c50 (ENSMUSG00000054827) #34	Cyp2c54 (ENSMUSG00000067225) #35	Cyp2c37 (ENSMUSG00000042248) #36
Ryukyu mouse	MODERN SPECIES	10	Ankrd2 (MGP_CAROLIEiJ_G0022963) #7	Ubtd1 (MGP_CAROLIEiJ_G0022962) #8	Mms19 (MGP_CAROLIEiJ_G0022961) #9	Zdhhc16 (MGP_CAROLIEiJ_G0022960) #10	Exosc1 (MGP_CAROLIEiJ_G0022959) #11	Pgam1 (MGP_CAROLIEiJ_G0022958) #12	Rrp12 (MGP_CAROLIEiJ_G0022957) #13	Frat2 (MGP_CAROLIEiJ_G0022956) #14	Arhgap19 (MGP_CAROLIEiJ_G0022955) #15	Slit1 (MGP_CAROLIEiJ_G0022954) #16	MGP_CAROLIEiJ_G0022953 #17	MGP_CAROLIEiJ_G0022952 #18	MGP_CAROLIEiJ_G0022951 #19	Pik3ap1 (MGP_CAROLIEiJ_G0022950) #20	Tm9sf3 (MGP_CAROLIEiJ_G0022949) #21	Tll2 (MGP_CAROLIEiJ_G0022948) #22	Opalin (MGP_CAROLIEiJ_G0022947) #23	Dntt (MGP_CAROLIEiJ_G0022946) #24	Blnk (MGP_CAROLIEiJ_G0022945) #25	Zfp518a (MGP_CAROLIEiJ_G0022944) #26	Ccnj (MGP_CAROLIEiJ_G0022943) #27	Entpd1 (MGP_CAROLIEiJ_G0022942) #28	Tctn3 (MGP_CAROLIEiJ_G0022941) #29	Aldh18a1 (MGP_CAROLIEiJ_G0022940) #30	MGP_CAROLIEiJ_G0022939 #31	Pdlim1 (MGP_CAROLIEiJ_G0022938) #32	Cyp2c70 (MGP_CAROLIEiJ_G0022937) #33	MGP_CAROLIEiJ_G0022936 #34	MGP_CAROLIEiJ_G0022935 #34	Cyp2c37 (MGP_CAROLIEiJ_G0022934) #36	MGP_CAROLIEiJ_G0022933