Eutheria	ANCESTRAL SPECIES	16										ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000166196
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Glires	ANCESTRAL SPECIES	10	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Rodentia	ANCESTRAL SPECIES	10	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935.eb.a #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935.eb.a #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Hystricomorpha_b	ANCESTRAL SPECIES	84	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935.eb.a #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Degu	MODERN SPECIES	259		ENSODEG00000002731 #8	ENSODEG00000002721 #9	CCSER1 (ENSODEG00000002701) #10	ENSODEG00000003691 #11	GABRQ (ENSODEG00000003646) #12	ENSODEG00000003612 #13	NSDHL (ENSODEG00000003563) #14	ENSODEG00000003535 #15	ZFP92 (ENSODEG00000003508) #16	TREX2 (ENSODEG00000019142) #17	HAUS7 (ENSODEG00000003475) #18	BGN (ENSODEG00000003451) #19	ATP2B3 (ENSODEG00000003358) #20	CCNQ (ENSODEG00000003285) #21	DUSP9 (ENSODEG00000003261) #22	PNCK (ENSODEG00000003252) #23	ENSODEG00000003207 #24	BCAP31 (ENSODEG00000003174) #25	ABCD1 (ENSODEG00000003127) #26	PLXNB3 (ENSODEG00000002965) #27	SRPK3 (ENSODEG00000002869) #28	IDH3G (ENSODEG00000002774) #29	SSR4 (ENSODEG00000002732) #30	PDZD4 (ENSODEG00000005482) #31	L1CAM (ENSODEG00000005259) #32	ENSODEG00000005204 #33	AVPR2 (ENSODEG00000005166) #34	ARHGAP4 (ENSODEG00000005124) #35	ENSODEG00000005100 #36	RENBP (ENSODEG00000005065) #37
Long-tailed chinchilla	MODERN SPECIES	287									ENSCLAG00000002477 #15	ZFP92 (ENSCLAG00000002658) #16	TREX2 (ENSCLAG00000002698) #17	HAUS7 (ENSCLAG00000002789) #18	BGN (ENSCLAG00000003040) #19	ATP2B3 (ENSCLAG00000006386) #20	CCNQ (ENSCLAG00000008202) #21	DUSP9 (ENSCLAG00000008316) #22	PNCK (ENSCLAG00000002167) #23	ENSCLAG00000002550 #24	BCAP31 (ENSCLAG00000002843) #25	ABCD1 (ENSCLAG00000001650) #26	PLXNB3 (ENSCLAG00000001828) #27	SRPK3 (ENSCLAG00000001932) #28	IDH3G (ENSCLAG00000002456) #29	SSR4 (ENSCLAG00000002670) #30	PDZD4 (ENSCLAG00000002707) #31	L1CAM (ENSCLAG00000001453) #32	AVPR2 (ENSCLAG00000002650) #34	ENSCLAG00000001334 #35	NAA10 (ENSCLAG00000001427) #36	RENBP (ENSCLAG00000003810) #37	HCFC1 (ENSCLAG00000004175)
Guinea pig	MODERN SPECIES	148							ENSCPOG00000037160	ENSCPOG00000011291 #15	ENSCPOG00000020829	ZFP92 (ENSCPOG00000006654) #16	TREX2 (ENSCPOG00000025702) #17	HAUS7 (ENSCPOG00000007497) #18	BGN (ENSCPOG00000023628) #19	ATP2B3 (ENSCPOG00000005102) #20	CCNQ (ENSCPOG00000009250) #21	DUSP9 (ENSCPOG00000000114) #22	ENSCPOG00000011710 #24	BCAP31 (ENSCPOG00000008510) #25	ABCD1 (ENSCPOG00000011702) #26	PLXNB3 (ENSCPOG00000006868) #27	SRPK3 (ENSCPOG00000006881) #28	IDH3G (ENSCPOG00000006890) #29	SSR4 (ENSCPOG00000006898) #30	PDZD4 (ENSCPOG00000019482) #31	L1CAM (ENSCPOG00000005519) #32	AVPR2 (ENSCPOG00000012697) #34	ENSCPOG00000026143 #35	NAA10 (ENSCPOG00000011495) #36	ENSCPOG00000024784 #37	IRAK1 (ENSCPOG00000039151)	MECP2 (ENSCPOG00000012579)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000033617	ENSHGLG00000045983	ENSHGLG00000047243	ENSHGLG00000045027	ENSHGLG00000000219	ENSHGLG00000035866	ENSHGLG00000032270	ENSHGLG00000046068 #15	ENSHGLG00000045727	ENSHGLG00000035589 #16	TREX2 (ENSHGLG00000008010) #17	HAUS7 (ENSHGLG00000002908) #18	BGN (ENSHGLG00000004010) #19	ATP2B3 (ENSHGLG00000000642) #20	CCNQ (ENSHGLG00000003517) #21	DUSP9 (ENSHGLG00000004236) #22	PNCK (ENSHGLG00000006098) #23	ENSHGLG00000037294 #24	BCAP31 (ENSHGLG00000000710) #25	ABCD1 (ENSHGLG00000001000) #26	PLXNB3 (ENSHGLG00000002203) #27	IDH3G (ENSHGLG00000000443) #29	SSR4 (ENSHGLG00000001720) #30	PDZD4 (ENSHGLG00000001939) #31	L1CAM (ENSHGLG00000003403) #32	AVPR2 (ENSHGLG00000006784) #34	ARHGAP4 (ENSHGLG00000000857) #35	NAA10 (ENSHGLG00000002773) #36	RENBP (ENSHGLG00000009835) #37	HCFC1 (ENSHGLG00000001143)	IRAK1 (ENSHGLG00000002116)
Sciuridae	ANCESTRAL SPECIES	27	ENSGT00940000162167 #12	ENSGT00940000155935.cb #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Eurasian red squirrel	MODERN SPECIES	156	NSDHL (ENSSVLG00005022122) #14	ZNF185 (ENSSVLG00005022073)	PNMA5 (ENSSVLG00005022038)	ENSSVLG00005021967	PNMA3 (ENSSVLG00005021940)	ENSSVLG00005021915	ENSSVLG00005021891	ENSSVLG00005021871	ENSSVLG00005021782	ENSSVLG00005021735	ZFP92 (ENSSVLG00005021718) #16	HAUS7 (ENSSVLG00005021619) #18	BGN (ENSSVLG00005021572) #19	ATP2B3 (ENSSVLG00005020846) #20	CCNQ (ENSSVLG00005020662) #21	DUSP9 (ENSSVLG00005020621) #22	PNCK (ENSSVLG00005020384) #23	ENSSVLG00005020284 #24	BCAP31 (ENSSVLG00005020208) #25	ABCD1 (ENSSVLG00005020163) #26	ENSSVLG00005020066 #27	SRPK3 (ENSSVLG00005020004) #28	IDH3G (ENSSVLG00005019902) #29	SSR4 (ENSSVLG00005019816) #30	PDZD4 (ENSSVLG00005019686) #31	AVPR2 (ENSSVLG00005019578) #34	ENSSVLG00005019536	ARHGAP4 (ENSSVLG00005019458) #35	NAA10 (ENSSVLG00005019123) #36	RENBP (ENSSVLG00005019023) #37	HCFC1 (ENSSVLG00005018524)
Marmotini	ANCESTRAL SPECIES	83								ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Alpin marmot	MODERN SPECIES	541																ENSMMMG00000001424 #22
Marmotini_b	ANCESTRAL SPECIES	124								ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Arctic ground squirrel	MODERN SPECIES	562								ZNF275 (ENSUPAG00010012750)	ENSUPAG00010012742	ZFP92 (ENSUPAG00010012725) #16	TREX2 (ENSUPAG00010012721) #17	HAUS7 (ENSUPAG00010012697) #18	BGN (ENSUPAG00010012684) #19	ATP2B3 (ENSUPAG00010012590) #20	CCNQ (ENSUPAG00010012574) #21	DUSP9 (ENSUPAG00010012557) #22	PNCK (ENSUPAG00010012527) #23	ENSUPAG00010012523 #24	ABCD1 (ENSUPAG00010012506) #26	ENSUPAG00010012496	ENSUPAG00010012465 #27	SRPK3 (ENSUPAG00010012441) #28	IDH3G (ENSUPAG00010012400) #29	SSR4 (ENSUPAG00010012375) #30	PDZD4 (ENSUPAG00010012358) #31	L1CAM (ENSUPAG00010012204) #32	AVPR2 (ENSUPAG00010012191) #34	ARHGAP4 (ENSUPAG00010012018) #35	NAA10 (ENSUPAG00010011976) #36	RENBP (ENSUPAG00010011941) #37	HCFC1 (ENSUPAG00010011877)
Squirrel	MODERN SPECIES	409						ENSSTOG00000032558	ZNF275 (ENSSTOG00000022633)	ENSSTOG00000033034	ENSSTOG00000029369	ZFP92 (ENSSTOG00000009126) #16	TREX2 (ENSSTOG00000027213) #17	HAUS7 (ENSSTOG00000022988) #18	BGN (ENSSTOG00000008058) #19	ATP2B3 (ENSSTOG00000008068) #20	CCNQ (ENSSTOG00000008103) #21	DUSP9 (ENSSTOG00000008115) #22	PNCK (ENSSTOG00000008119) #23	ENSSTOG00000026886 #24	BCAP31 (ENSSTOG00000008138) #25	ABCD1 (ENSSTOG00000008153) #26	ENSSTOG00000008188	PLXNB3 (ENSSTOG00000008197) #27	SRPK3 (ENSSTOG00000008233) #28	IDH3G (ENSSTOG00000008261) #29	SSR4 (ENSSTOG00000008278) #30	PDZD4 (ENSSTOG00000021423) #31	L1CAM (ENSSTOG00000008316) #32	AVPR2 (ENSSTOG00000008352) #34	ARHGAP4 (ENSSTOG00000022503) #35	NAA10 (ENSSTOG00000010237) #36	RENBP (ENSSTOG00000010247) #37
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Muroidea	ANCESTRAL SPECIES	13	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00390000006832	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Cricetinae	ANCESTRAL SPECIES	46						ENSGT00390000000062.x.b.k.b	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00940000161383	ENSGT00940000160502
Golden Hamster	MODERN SPECIES	857									ENSMAUG00000019268 #15	Gm18336 (ENSMAUG00000017654)	Zfp92 (ENSMAUG00000006204) #16	Trex2 (ENSMAUG00000006617) #17	Haus7 (ENSMAUG00000020073) #18	Bgn (ENSMAUG00000020050) #19	Atp2b3 (ENSMAUG00000009992) #20	Dusp9 (ENSMAUG00000020993) #22	Pnck (ENSMAUG00000017486) #23	Slc6a8 (ENSMAUG00000017007) #24	Bcap31 (ENSMAUG00000009135) #25	Abcd1 (ENSMAUG00000020103) #26	Plxnb3 (ENSMAUG00000005458) #27	Srpk3 (ENSMAUG00000009935) #28	Idh3g (ENSMAUG00000000657) #29	ENSMAUG00000015090 #30	Pdzd4 (ENSMAUG00000000466) #31	L1cam (ENSMAUG00000008575) #32	Avpr2 (ENSMAUG00000001098) #34	Arhgap4 (ENSMAUG00000020011) #35	Naa10 (ENSMAUG00000019021) #36	Hcfc1 (ENSMAUG00000018495)	Irak1 (ENSMAUG00000002430)
Chinese hamster chok1gshd	MODERN SPECIES	16	Nsdhl (ENSCGRG00001015462) #14	Zfp185 (ENSCGRG00001021834)	ENSCGRG00001024731	ENSCGRG00001005230	ENSCGRG00001023020	F8a (ENSCGRG00001010823)	ENSCGRG00001011071	Gm45015 (ENSCGRG00001000704)	ENSCGRG00001020684 #15	Gm18336 (ENSCGRG00001009753)	Zfp92 (ENSCGRG00001024615) #16	Trex2 (ENSCGRG00001012110) #17	Haus7 (ENSCGRG00001014259) #18	Bgn (ENSCGRG00001004273) #19	Atp2b3 (ENSCGRG00001013946) #20	Dusp9 (ENSCGRG00001015656) #22	Pnck (ENSCGRG00001015654) #23	Slc6a8 (ENSCGRG00001013941) #24	ENSCGRG00001022627 #25	Abcd1 (ENSCGRG00001017773) #26	Plxnb3 (ENSCGRG00001024658) #27	Srpk3 (ENSCGRG00001005920) #28	Idh3g (ENSCGRG00001012756) #29	Ssr4 (ENSCGRG00001019369) #30	Pdzd4 (ENSCGRG00001012732) #31	L1cam (ENSCGRG00001020541) #32	Avpr2 (ENSCGRG00001010799) #34	Arhgap4 (ENSCGRG00001023232) #35	Naa10 (ENSCGRG00001012595) #36	Hcfc1 (ENSCGRG00001019535)	Irak1 (ENSCGRG00001013928)
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00940000161201	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v.i #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Prairie vole	MODERN SPECIES	212									ENSMOCG00000008885	Gm18336 (ENSMOCG00000000683)	Zfp92 (ENSMOCG00000015417) #16	Trex2 (ENSMOCG00000001305) #17	ENSMOCG00000016829 #18	Bgn (ENSMOCG00000005439) #19	Atp2b3 (ENSMOCG00000016837) #20	Dusp9 (ENSMOCG00000014149) #22	Pnck (ENSMOCG00000005305) #23	Slc6a8 (ENSMOCG00000013922) #24	Bcap31 (ENSMOCG00000011355) #25	Abcd1 (ENSMOCG00000020381) #26	Plxnb3 (ENSMOCG00000016754) #27	Srpk3 (ENSMOCG00000000270) #28	Idh3g (ENSMOCG00000013265) #29	Ssr4 (ENSMOCG00000000481) #30	Pdzd4 (ENSMOCG00000013342) #31	L1cam (ENSMOCG00000018901) #32	Avpr2 (ENSMOCG00000012257) #34	Arhgap4 (ENSMOCG00000010795) #35	Naa10 (ENSMOCG00000011968) #36	Renbp (ENSMOCG00000021137) #37	Hcfc1 (ENSMOCG00000018390)
Northern American deer mouse	MODERN SPECIES	475	Gabrq (ENSPEMG00000024127) #12	Cetn2 (ENSPEMG00000009693) #13	Nsdhl (ENSPEMG00000028251) #14	ENSPEMG00000016866	Zfp185 (ENSPEMG00000001172)	Pnma5 (ENSPEMG00000029060)	ENSPEMG00000029415	ENSPEMG00000014112	Zfp275 (ENSPEMG00000028598)	ENSPEMG00000002119	Zfp92 (ENSPEMG00000029357) #16	Trex2 (ENSPEMG00000004918) #17	Haus7 (ENSPEMG00000011467) #18	Bgn (ENSPEMG00000017164) #19	Atp2b3 (ENSPEMG00000001607) #20	Dusp9 (ENSPEMG00000009249) #22	Pnck (ENSPEMG00000018929) #23	ENSPEMG00000001387 #24	Bcap31 (ENSPEMG00000018100) #25	Abcd1 (ENSPEMG00000010748) #26	Plxnb3 (ENSPEMG00000019022) #27	Srpk3 (ENSPEMG00000012149) #28	Idh3g (ENSPEMG00000011232) #29	Ssr4 (ENSPEMG00000008760) #30	Pdzd4 (ENSPEMG00000008494) #31	L1cam (ENSPEMG00000011592) #32	Avpr2 (ENSPEMG00000008325) #34	Arhgap4 (ENSPEMG00000019112) #35	ENSPEMG00000010870 #37	Hcfc1 (ENSPEMG00000011837)	Irak1 (ENSPEMG00000001469)
Murinae	ANCESTRAL SPECIES	14	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Mus	ANCESTRAL SPECIES	9	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Mus_B	ANCESTRAL SPECIES	14	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
spretus	MODERN SPECIES	19	Magea10 (MGP_SPRETEiJ_G0034293)	Gabra3 (MGP_SPRETEiJ_G0034294)	Gabrq (MGP_SPRETEiJ_G0034295) #12	Cetn2 (MGP_SPRETEiJ_G0034296) #13	Nsdhl (MGP_SPRETEiJ_G0034297) #14	Zfp185 (MGP_SPRETEiJ_G0034298)	Pnma5 (MGP_SPRETEiJ_G0034299)	Pnma3 (MGP_SPRETEiJ_G0034300)	F8a (MGP_SPRETEiJ_G0034301)	Zfp275 (MGP_SPRETEiJ_G0034302)	Zfp92 (MGP_SPRETEiJ_G0034303) #16	Trex2 (MGP_SPRETEiJ_G0034304) #17	Haus7 (MGP_SPRETEiJ_G0034305) #18	Bgn (MGP_SPRETEiJ_G0034306) #19	Atp2b3 (MGP_SPRETEiJ_G0034307) #20	Dusp9 (MGP_SPRETEiJ_G0034308) #22	Pnck (MGP_SPRETEiJ_G0034309) #23	Slc6a8 (MGP_SPRETEiJ_G0034310) #24	Bcap31 (MGP_SPRETEiJ_G0034311) #25	Abcd1 (MGP_SPRETEiJ_G0034312) #26	Plxnb3 (MGP_SPRETEiJ_G0034313) #27	Srpk3 (MGP_SPRETEiJ_G0034314) #28	Idh3g (MGP_SPRETEiJ_G0034315) #29	Ssr4 (MGP_SPRETEiJ_G0034316) #30	Pdzd4 (MGP_SPRETEiJ_G0034317) #31	L1cam (MGP_SPRETEiJ_G0034318) #32	Arhgap4 (MGP_SPRETEiJ_G0034319) #35	Avpr2 (MGP_SPRETEiJ_G0034320) #34	Naa10 (MGP_SPRETEiJ_G0034321) #36	Renbp (MGP_SPRETEiJ_G0034322) #37	Hcfc1 (MGP_SPRETEiJ_G0034323)
Steppe mouse	MODERN SPECIES	886																Dusp9 (ENSMSIG00000007104) #22
Mouse	MODERN SPECIES	37	Spin2d (ENSMUSG00000079566)	Xlr3b (ENSMUSG00000073125)	Xlr4b (ENSMUSG00000067768)	F8a (ENSMUSG00000078317)	Xlr4c (ENSMUSG00000031362)	Xlr3c (ENSMUSG00000058147)	Xlr5c (ENSMUSG00000067764)	Gm45015 (ENSMUSG00000109368)	Zfp275 (ENSMUSG00000031365)	Gm18336 (ENSMUSG00000096966)	Zfp92 (ENSMUSG00000031374) #16	Trex2 (ENSMUSG00000031372) #17	Haus7 (ENSMUSG00000031371) #18	Bgn (ENSMUSG00000031375) #19	Atp2b3 (ENSMUSG00000031376) #20	Dusp9 (ENSMUSG00000031383) #22	Pnck (ENSMUSG00000002012) #23	Slc6a8 (ENSMUSG00000019558) #24	Bcap31 (ENSMUSG00000002015) #25	Abcd1 (ENSMUSG00000031378) #26	Plxnb3 (ENSMUSG00000031385) #27	Srpk3 (ENSMUSG00000002007) #28	Idh3g (ENSMUSG00000002010) #29	Ssr4 (ENSMUSG00000002014) #30	Pdzd4 (ENSMUSG00000002006) #31	L1cam (ENSMUSG00000031391) #32	Arhgap4 (ENSMUSG00000031389) #35	Avpr2 (ENSMUSG00000031390) #34	Naa10 (ENSMUSG00000031388) #36	Renbp (ENSMUSG00000031387) #37	Hcfc1 (ENSMUSG00000031386)
Ryukyu mouse	MODERN SPECIES	19	Magea4 (MGP_CAROLIEiJ_G0033138)	Gabre (MGP_CAROLIEiJ_G0033139)	Magea10 (MGP_CAROLIEiJ_G0033140)	Gabra3 (MGP_CAROLIEiJ_G0033141)	Gabrq (MGP_CAROLIEiJ_G0033142) #12	Cetn2 (MGP_CAROLIEiJ_G0033143) #13	Nsdhl (MGP_CAROLIEiJ_G0033144) #14	Zfp185 (MGP_CAROLIEiJ_G0033145)	Pnma5 (MGP_CAROLIEiJ_G0033146)	Zfp275 (MGP_CAROLIEiJ_G0033147)	Zfp92 (MGP_CAROLIEiJ_G0033148) #16	Trex2 (MGP_CAROLIEiJ_G0033149) #17	Haus7 (MGP_CAROLIEiJ_G0033150) #18	Bgn (MGP_CAROLIEiJ_G0033151) #19	Atp2b3 (MGP_CAROLIEiJ_G0033152) #20	Dusp9 (MGP_CAROLIEiJ_G0033153) #22	Pnck (MGP_CAROLIEiJ_G0033154) #23	Slc6a8 (MGP_CAROLIEiJ_G0033155) #24	Bcap31 (MGP_CAROLIEiJ_G0033156) #25	Abcd1 (MGP_CAROLIEiJ_G0033157) #26	Plxnb3 (MGP_CAROLIEiJ_G0033158) #27	Srpk3 (MGP_CAROLIEiJ_G0033159) #28	Idh3g (MGP_CAROLIEiJ_G0033160) #29	Ssr4 (MGP_CAROLIEiJ_G0033161) #30	Pdzd4 (MGP_CAROLIEiJ_G0033162) #31	L1cam (MGP_CAROLIEiJ_G0033163) #32	Arhgap4 (MGP_CAROLIEiJ_G0033164) #35	Avpr2 (MGP_CAROLIEiJ_G0033165) #34	Naa10 (MGP_CAROLIEiJ_G0033166) #36	Renbp (MGP_CAROLIEiJ_G0033167) #37	Hcfc1 (MGP_CAROLIEiJ_G0033168)
Shrew mouse	MODERN SPECIES	23	Magea10 (MGP_PahariEiJ_G0031681)	Gabra3 (MGP_PahariEiJ_G0031682)	Gabrq (MGP_PahariEiJ_G0031683) #12	Cetn2 (MGP_PahariEiJ_G0031684) #13	Nsdhl (MGP_PahariEiJ_G0031685) #14	Zfp185 (MGP_PahariEiJ_G0031686)	MGP_PahariEiJ_G0031687	MGP_PahariEiJ_G0031688	MGP_PahariEiJ_G0031689	Zfp275 (MGP_PahariEiJ_G0031690)	MGP_PahariEiJ_G0031691 #16	Trex2 (MGP_PahariEiJ_G0031692) #17	Haus7 (MGP_PahariEiJ_G0031693) #18	Bgn (MGP_PahariEiJ_G0031694) #19	Atp2b3 (MGP_PahariEiJ_G0031695) #20	Dusp9 (MGP_PahariEiJ_G0031696) #22	Pnck (MGP_PahariEiJ_G0031697) #23	Slc6a8 (MGP_PahariEiJ_G0031698) #24	Bcap31 (MGP_PahariEiJ_G0031699) #25	Abcd1 (MGP_PahariEiJ_G0031700) #26	Plxnb3 (MGP_PahariEiJ_G0031701) #27	Srpk3 (MGP_PahariEiJ_G0031702) #28	Idh3g (MGP_PahariEiJ_G0031703) #29	Ssr4 (MGP_PahariEiJ_G0031704) #30	Pdzd4 (MGP_PahariEiJ_G0031705) #31	L1cam (MGP_PahariEiJ_G0031706) #32	Arhgap4 (MGP_PahariEiJ_G0031707) #35	Avpr2 (MGP_PahariEiJ_G0031708) #34	Naa10 (MGP_PahariEiJ_G0031709) #36	Renbp (MGP_PahariEiJ_G0031710) #37	Hcfc1 (MGP_PahariEiJ_G0031711)
Rat	MODERN SPECIES	46	F8a1 (ENSRNOG00000070033)	LOC103690322 (ENSRNOG00000055822)	LOC100911047 (ENSRNOG00000068104)	Xlr3a (ENSRNOG00000064693)	LOC100911002 (ENSRNOG00000050177)	Pwwp4 (ENSRNOG00000068777)	ENSRNOG00000069789	Zfp275 (ENSRNOG00000061073)	RGD1559982 (ENSRNOG00000070467)	Zfp92 (ENSRNOG00000051836) #16	Trex2 (ENSRNOG00000056983) #17	Haus7 (ENSRNOG00000055648) #18	Bgn (ENSRNOG00000055962) #19	Atp2b3 (ENSRNOG00000061304) #20	AABR07071935.1 (ENSRNOG00000061441)	Dusp9 (ENSRNOG00000055185) #22	Pnck (ENSRNOG00000058317) #23	Slc6a8 (ENSRNOG00000057620) #24	Bcap31 (ENSRNOG00000055756) #25	Abcd1 (ENSRNOG00000056524) #26	Plxnb3 (ENSRNOG00000061731) #27	Srpk3 (ENSRNOG00000054548) #28	Idh3g (ENSRNOG00000055572) #29	Ssr4 (ENSRNOG00000053172) #30	Pdzd4 (ENSRNOG00000056174) #31	L1cam (ENSRNOG00000061230) #32	Arhgap4 (ENSRNOG00000058545) #35	Avpr2 (ENSRNOG00000059862) #34	Naa10 (ENSRNOG00000060063) #36	Renbp (ENSRNOG00000054765) #37	Hcfc1 (ENSRNOG00000051948)
Upper Galilee mountains blind mole rat	MODERN SPECIES	660	Magea10 (ENSNGAG00000018067)	Gabra3 (ENSNGAG00000004762)	Gabrq (ENSNGAG00000023448) #12	Cetn2 (ENSNGAG00000013931) #13	Nsdhl (ENSNGAG00000013199) #14	Zfp185 (ENSNGAG00000007010)	Pnma3 (ENSNGAG00000021577)	Zfp275 (ENSNGAG00000023803)	Gm18336 (ENSNGAG00000010715)	Zfp92 (ENSNGAG00000014044) #16	Trex2 (ENSNGAG00000022556) #17	Haus7 (ENSNGAG00000004509) #18	Bgn (ENSNGAG00000020236) #19	Atp2b3 (ENSNGAG00000023103) #20	ENSNGAG00000022572 #21	Dusp9 (ENSNGAG00000022463) #22	Pnck (ENSNGAG00000024203) #23	Slc6a8 (ENSNGAG00000012992) #24	Bcap31 (ENSNGAG00000005195) #25	Abcd1 (ENSNGAG00000023420) #26	Plxnb3 (ENSNGAG00000023368) #27	Srpk3 (ENSNGAG00000021121) #28	Idh3g (ENSNGAG00000017889) #29	ENSNGAG00000015787 #30	Pdzd4 (ENSNGAG00000009443) #31	L1cam (ENSNGAG00000013550) #32	Avpr2 (ENSNGAG00000009849) #34	Arhgap4 (ENSNGAG00000015413) #35	Naa10 (ENSNGAG00000020303) #36	Renbp (ENSNGAG00000021686) #37	Hcfc1 (ENSNGAG00000013083)
Lesser Egyptian jerboa	MODERN SPECIES	224							Pnma5 (ENSJJAG00000022106)	ENSJJAG00000023268	Zfp275 (ENSJJAG00000023544)	ENSJJAG00000023776	Zfp92 (ENSJJAG00000024019) #16	Trex2 (ENSJJAG00000012484) #17	Haus7 (ENSJJAG00000011304) #18	Bgn (ENSJJAG00000014050) #19	Atp2b3 (ENSJJAG00000014975) #20	Dusp9 (ENSJJAG00000018570) #22	Pnck (ENSJJAG00000020546) #23	Slc6a8 (ENSJJAG00000022046) #24	Bcap31 (ENSJJAG00000011510) #25	Abcd1 (ENSJJAG00000012430) #26	Plxnb3 (ENSJJAG00000017006) #27	Srpk3 (ENSJJAG00000019785) #28	Idh3g (ENSJJAG00000015962) #29	Ssr4 (ENSJJAG00000017842) #30	Pdzd4 (ENSJJAG00000018534) #31	L1cam (ENSJJAG00000021077) #32	Avpr2 (ENSJJAG00000018314) #34	Arhgap4 (ENSJJAG00000021798) #35	Naa10 (ENSJJAG00000023398) #36	Renbp (ENSJJAG00000010739) #37	Hcfc1 (ENSJJAG00000012815)
Kangaroo rat	MODERN SPECIES	526									ENSDORG00000029018	Zfp92 (ENSDORG00000001936) #16	Trex2 (ENSDORG00000023727) #17	Haus7 (ENSDORG00000001235) #18	ENSDORG00000001237 #19	Atp2b3 (ENSDORG00000013038) #20	ENSDORG00000012846 #21	Dusp9 (ENSDORG00000024222) #22	Pnck (ENSDORG00000014186) #23	Slc6a8 (ENSDORG00000001174) #24	Bcap31 (ENSDORG00000006022) #25	Abcd1 (ENSDORG00000006023) #26	Plxnb3 (ENSDORG00000006024) #27	Srpk3 (ENSDORG00000006026) #28	Idh3g (ENSDORG00000006029) #29	Ssr4 (ENSDORG00000006030) #30	Pdzd4 (ENSDORG00000028112) #31	L1cam (ENSDORG00000014093) #32	Avpr2 (ENSDORG00000002747) #34	Arhgap4 (ENSDORG00000002750) #35	Naa10 (ENSDORG00000002753) #36	Renbp (ENSDORG00000002755) #37	Hcfc1 (ENSDORG00000002756)
Lagomorpha	ANCESTRAL SPECIES	103											ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383	ENSGT00390000011272
Rabbit	MODERN SPECIES	549											TREX2 (ENSOCUG00000025054) #17	ENSOCUG00000002376 #18	BGN (ENSOCUG00000023931) #19	ATP2B3 (ENSOCUG00000029623) #20	CCNQ (ENSOCUG00000002393) #21	DUSP9 (ENSOCUG00000021158) #22	PNCK (ENSOCUG00000002399) #23	BCAP31 (ENSOCUG00000017921) #25	PLXNB3 (ENSOCUG00000016506) #27	ABCD1 (ENSOCUG00000017922) #26	IDH3G (ENSOCUG00000016554) #29	SSR4 (ENSOCUG00000027360) #30	ENSOCUG00000026260 #24	PDZD4 (ENSOCUG00000017200) #31	L1CAM (ENSOCUG00000001102) #32	AVPR2 (ENSOCUG00000015695) #34	ARHGAP4 (ENSOCUG00000001107) #35	NAA10 (ENSOCUG00000001111) #36	RENBP (ENSOCUG00000025840) #37	HCFC1 (ENSOCUG00000001113)	TMEM187 (ENSOCUG00000001116)
Pika	MODERN SPECIES	8486																DUSP9 (ENSOPRG00000012013) #22
Primates	ANCESTRAL SPECIES	23	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Simiiformes	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Catarrhini	ANCESTRAL SPECIES	12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e.a.b #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000164672	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00940000162921	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e.a.b #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e.a.b #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35
Gorilla	MODERN SPECIES	523	ZNF185 (ENSGGOG00000017066)	PNMA5 (ENSGGOG00000000643)	PNMA3 (ENSGGOG00000034909)	ENSGGOG00000043525	ENSGGOG00000036462	MAGEA1 (ENSGGOG00000010904)	PNMA6F (ENSGGOG00000039046)	ENSGGOG00000010898	ENSGGOG00000038628	ZFP92 (ENSGGOG00000039989) #16	TREX2 (ENSGGOG00000036312) #17	HAUS7 (ENSGGOG00000007959) #18	BGN (ENSGGOG00000007211) #19	ATP2B3 (ENSGGOG00000007217) #20	ENSGGOG00000027073 #21	DUSP9 (ENSGGOG00000015273) #22	ENSGGOG00000039596	PNCK (ENSGGOG00000005546) #23	ENSGGOG00000041742 ##24	ENSGGOG00000005559 #25	ABCD1 (ENSGGOG00000005561) #26	PLXNB3 (ENSGGOG00000027723) #27	SRPK3 (ENSGGOG00000036424) #28	IDH3G (ENSGGOG00000023796) #29	SSR4 (ENSGGOG00000024329) #30	PDZD4 (ENSGGOG00000007937) #31	AVPR2 (ENSGGOG00000027387) #34	ARHGAP4 (ENSGGOG00000009770) #35	NAA10 (ENSGGOG00000009788) #36	RENBP (ENSGGOG00000009791) #37	HCFC1 (ENSGGOG00000009800)
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e.a.b #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35
Human	MODERN SPECIES	1827	ZNF185 (ENSG00000147394)	PNMA5 (ENSG00000198883)	PNMA3 (ENSG00000183837)	PNMA6A (ENSG00000235961)	MAGEA1 (ENSG00000198681)	PWWP4 (ENSG00000278803)	PNMA6F (ENSG00000225110)	ZNF275 (ENSG00000063587)	PNMA6E (ENSG00000214897)	ZFP92 (ENSG00000189420) #16	TREX2 (ENSG00000183479) #17	HAUS7 (ENSG00000213397) #18	BGN (ENSG00000182492) #19	ATP2B3 (ENSG00000067842) #20	CCNQ (ENSG00000262919) #21	DUSP9 (ENSG00000130829) #22	PNCK (ENSG00000130822) #23	SLC6A8 (ENSG00000130821) #24	BCAP31 (ENSG00000185825) #25	ABCD1 (ENSG00000101986) #26	PLXNB3 (ENSG00000198753) #27	SRPK3 (ENSG00000184343) #28	IDH3G (ENSG00000067829) #29	SSR4 (ENSG00000180879) #30	PDZD4 (ENSG00000067840) #31	L1CAM (ENSG00000198910) #32	AVPR2 (ENSG00000126895) #34	ARHGAP4 (ENSG00000089820) #35	NAA10 (ENSG00000102030) #36	RENBP (ENSG00000102032) #37	HCFC1 (ENSG00000172534)
Pan	ANCESTRAL SPECIES	6	ENSGT00940000164672	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e.a.b #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	259																ENSPTRG00000045215 #22	ENSPTRG00000048716	ENSPTRG00000047427 #23
Chimpanzee	MODERN SPECIES	972	ENSPTRG00000044072 #13	NSDHL (ENSPTRG00000022390) #14	ZNF185 (ENSPTRG00000022391)	PNMA5 (ENSPTRG00000028170)	PNMA3 (ENSPTRG00000029325)	ENSPTRG00000048952	ENSPTRG00000044850	MAGEA1 (ENSPTRG00000022386)	PNMA6F (ENSPTRG00000049868)	ZNF275 (ENSPTRG00000022394)	ZFP92 (ENSPTRG00000047228) #16	HAUS7 (ENSPTRG00000022397) #18	BGN (ENSPTRG00000022541) #19	ATP2B3 (ENSPTRG00000022399) #20	CCNQ (ENSPTRG00000043565) #21	ENSPTRG00000050474 #22	ENSPTRG00000043668	PNCK (ENSPTRG00000022404) #23	ENSPTRG00000050829 #24	BCAP31 (ENSPTRG00000046838) #25	ABCD1 (ENSPTRG00000051738) #26	PLXNB3 (ENSPTRG00000052414) #27	SRPK3 (ENSPTRG00000022410) #28	IDH3G (ENSPTRG00000024398) #29	SSR4 (ENSPTRG00000022412) #30	PDZD4 (ENSPTRG00000022413) #31	ENSPTRG00000045057	L1CAM (ENSPTRG00000022416) #32	ENSPTRG00000039921	AVPR2 (ENSPTRG00000033849) #34	ARHGAP4 (ENSPTRG00000033931) #35
Bonobo	MODERN SPECIES	369	MAGEA10 (ENSPPAG00000004915)	GABRA3 (ENSPPAG00000031555)	GABRQ (ENSPPAG00000032226) #12	CETN2 (ENSPPAG00000038780) #13	NSDHL (ENSPPAG00000039481) #14	ZNF185 (ENSPPAG00000039048)	PNMA5 (ENSPPAG00000009176)	PNMA3 (ENSPPAG00000033493)	ENSPPAG00000043033	ENSPPAG00000016764	ZFP92 (ENSPPAG00000027875) #16	HAUS7 (ENSPPAG00000034336) #18	BGN (ENSPPAG00000033259) #19	ATP2B3 (ENSPPAG00000028306) #20	ENSPPAG00000027886 #21	DUSP9 (ENSPPAG00000043656) #22	ENSPPAG00000029417	PNCK (ENSPPAG00000030824) #23	SLC6A8 (ENSPPAG00000035106) #24	BCAP31 (ENSPPAG00000033741) #25	ABCD1 (ENSPPAG00000038979) #26	PLXNB3 (ENSPPAG00000029812) #27	SRPK3 (ENSPPAG00000030197) #28	IDH3G (ENSPPAG00000041999) #29	SSR4 (ENSPPAG00000041018) #30	PDZD4 (ENSPPAG00000038351) #31	ENSPPAG00000001011	L1CAM (ENSPPAG00000042079) #32	AVPR2 (ENSPPAG00000034862) #34	ARHGAP4 (ENSPPAG00000039545) #35	ENSPPAG00000037021 #36
Orangutan	MODERN SPECIES	242	CETN2 (ENSPPYG00000020833) #13	NSDHL (ENSPPYG00000020834) #14	ZNF185 (ENSPPYG00000029371)	PNMA5 (ENSPPYG00000032957)	PNMA3 (ENSPPYG00000020835)	PNMA6A (ENSPPYG00000020836)	MAGEA1 (ENSPPYG00000020837)	PNMA6F (ENSPPYG00000020840)	ZNF275 (ENSPPYG00000020839)	ENSPPYG00000033472	ENSPPYG00000020841 #16	HAUS7 (ENSPPYG00000020843) #18	BGN (ENSPPYG00000020844) #19	ATP2B3 (ENSPPYG00000020845) #20	CCNQ (ENSPPYG00000020846) #21	DUSP9 (ENSPPYG00000020847) #22	ENSPPYG00000031169	ENSPPYG00000020848 #23	SLC6A8 (ENSPPYG00000037616) #24	BCAP31 (ENSPPYG00000020850) #25	ABCD1 (ENSPPYG00000020852) #26	SRPK3 (ENSPPYG00000020854) #28	IDH3G (ENSPPYG00000020855) #29	SSR4 (ENSPPYG00000020856) #30	PDZD4 (ENSPPYG00000020857) #31	ENSPPYG00000031511	L1CAM (ENSPPYG00000020858) #32	ENSPPYG00000020859 #34	ARHGAP4 (ENSPPYG00000020860) #35	NAA10 (ENSPPYG00000020861) #36	RENBP (ENSPPYG00000020862) #37
Gibbon	MODERN SPECIES	449	ENSNLEG00000030965	ENSNLEG00000033117	CETN2 (ENSNLEG00000033913) #13	NSDHL (ENSNLEG00000013866) #14	ZNF185 (ENSNLEG00000013907)	PNMA3 (ENSNLEG00000018300)	ENSNLEG00000014065	ENSNLEG00000031614	ENSNLEG00000027745	ZFP92 (ENSNLEG00000013228) #16	ENSNLEG00000013237 #17	ENSNLEG00000031253 #18	BGN (ENSNLEG00000013250) #19	ATP2B3 (ENSNLEG00000032741) #20	CCNQ (ENSNLEG00000013298) #21	DUSP9 (ENSNLEG00000013321) #22	ENSNLEG00000027939	PNCK (ENSNLEG00000013336) #23	BCAP31 (ENSNLEG00000013380) #25	ABCD1 (ENSNLEG00000013458) #26	PLXNB3 (ENSNLEG00000013475) #27	ENSNLEG00000013518 #28	IDH3G (ENSNLEG00000013540) #29	SSR4 (ENSNLEG00000013602) #30	PDZD4 (ENSNLEG00000013626) #31	ENSNLEG00000034251	L1CAM (ENSNLEG00000013647) #32	ENSNLEG00000031864	AVPR2 (ENSNLEG00000013671) #34	ARHGAP4 (ENSNLEG00000013678) #35	NAA10 (ENSNLEG00000013724) #36
Cercopithecidae	ANCESTRAL SPECIES	19	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Rhinopithecus	ANCESTRAL SPECIES	195								ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Golden snub-nosed monkey	MODERN SPECIES	977									ENSRROG00000033043	ENSRROG00000028871	ZFP92 (ENSRROG00000031212) #16	HAUS7 (ENSRROG00000005507) #18	BGN (ENSRROG00000042294) #19	ATP2B3 (ENSRROG00000043666) #20	CCNQ (ENSRROG00000038429) #21	DUSP9 (ENSRROG00000037162) #22	ENSRROG00000039351	PNCK (ENSRROG00000044383) #23	SLC6A8 (ENSRROG00000045113) #24	BCAP31 (ENSRROG00000045725) #25	ABCD1 (ENSRROG00000037289) #26	PLXNB3 (ENSRROG00000039660) #27	SRPK3 (ENSRROG00000011319) #28	IDH3G (ENSRROG00000044366) #29	SSR4 (ENSRROG00000035638) #30	PDZD4 (ENSRROG00000042678) #31	L1CAM (ENSRROG00000041494) #32	AVPR2 (ENSRROG00000036522) #34	ARHGAP4 (ENSRROG00000045508) #35	NAA10 (ENSRROG00000041881) #36	RENBP (ENSRROG00000034139) #37
Black snub-nosed monkey	MODERN SPECIES	661								PNMA6F (ENSRBIG00000030196)	ENSRBIG00000041318 #15	PNMA6E (ENSRBIG00000025010)	ZFP92 (ENSRBIG00000027712) #16	HAUS7 (ENSRBIG00000038209) #18	BGN (ENSRBIG00000043894) #19	ATP2B3 (ENSRBIG00000030237) #20	CCNQ (ENSRBIG00000034283) #21	DUSP9 (ENSRBIG00000031725) #22	ENSRBIG00000028856	PNCK (ENSRBIG00000039714) #23	SLC6A8 (ENSRBIG00000040899) #24	BCAP31 (ENSRBIG00000043421) #25	ABCD1 (ENSRBIG00000044662) #26	PLXNB3 (ENSRBIG00000026773) #27	IDH3G (ENSRBIG00000035445) #29	SSR4 (ENSRBIG00000015579) #30	PDZD4 (ENSRBIG00000029436) #31	L1CAM (ENSRBIG00000036638) #32	ENSRBIG00000032383 #34	ENSRBIG00000034619 #34	ARHGAP4 (ENSRBIG00000031629) #35	NAA10 (ENSRBIG00000040703) #36	RENBP (ENSRBIG00000020101) #37
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Pig-tailed macaque	MODERN SPECIES	390								PNMA6F (ENSMNEG00000031969)	ENSMNEG00000039113	PNMA6E (ENSMNEG00000038171)	ZFP92 (ENSMNEG00000042434) #16	HAUS7 (ENSMNEG00000036428) #18	BGN (ENSMNEG00000042759) #19	ATP2B3 (ENSMNEG00000044784) #20	CCNQ (ENSMNEG00000042079) #21	DUSP9 (ENSMNEG00000040094) #22	ENSMNEG00000028994	PNCK (ENSMNEG00000040586) #23	SLC6A8 (ENSMNEG00000005457) #24	BCAP31 (ENSMNEG00000028474) #25	ABCD1 (ENSMNEG00000033571) #26	PLXNB3 (ENSMNEG00000032414) #27	SRPK3 (ENSMNEG00000030566) #28	IDH3G (ENSMNEG00000042620) #29	SSR4 (ENSMNEG00000042721) #30	PDZD4 (ENSMNEG00000041450) #31	L1CAM (ENSMNEG00000042796) #32	AVPR2 (ENSMNEG00000029040) #34	ARHGAP4 (ENSMNEG00000039860) #35	NAA10 (ENSMNEG00000034261) #36	RENBP (ENSMNEG00000038526) #37
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00940000164672.a.b	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383	ENSGT00390000011272
Rhesus	MODERN SPECIES	327	CETN2 (ENSMMUG00000020743) #13	NSDHL (ENSMMUG00000013176) #14	ZNF185 (ENSMMUG00000015264)	PNMA5 (ENSMMUG00000018469)	PNMA3 (ENSMMUG00000010897)	ENSMMUG00000063804	ENSMMUG00000053273	PNMA6F (ENSMMUG00000048764)	ENSMMUG00000013386	PNMA6E (ENSMMUG00000045255)	ZFP92 (ENSMMUG00000057937) #16	HAUS7 (ENSMMUG00000012739) #18	BGN (ENSMMUG00000012743) #19	ATP2B3 (ENSMMUG00000011478) #20	CCNQ (ENSMMUG00000011480) #21	DUSP9 (ENSMMUG00000056988) #22	PNCK (ENSMMUG00000010585) #23	SLC6A8 (ENSMMUG00000012742) #24	BCAP31 (ENSMMUG00000012744) #25	ABCD1 (ENSMMUG00000012746) #26	SRPK3 (ENSMMUG00000003372) #28	IDH3G (ENSMMUG00000003374) #29	SSR4 (ENSMMUG00000003375) #30	PDZD4 (ENSMMUG00000003377) #31	L1CAM (ENSMMUG00000003379) #32	AVPR2 (ENSMMUG00000064945) #34	ARHGAP4 (ENSMMUG00000000323) #35	NAA10 (ENSMMUG00000000322) #36	RENBP (ENSMMUG00000000320) #37	HCFC1 (ENSMMUG00000000319)	TMEM187 (ENSMMUG00000005132)
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Olive baboon	MODERN SPECIES	792	IRAK1 (ENSPANG00000015781)	TMEM187 (ENSPANG00000050796)	HCFC1 (ENSPANG00000024276)	RENBP (ENSPANG00000008961) #37	NAA10 (ENSPANG00000014390) #36	ARHGAP4 (ENSPANG00000010087) #35	AVPR2 (ENSPANG00000004382) #34	L1CAM (ENSPANG00000013145) #32	PDZD4 (ENSPANG00000000291) #31	SSR4 (ENSPANG00000006591) #30	IDH3G (ENSPANG00000023323) #29	SRPK3 (ENSPANG00000004220) #28	PLXNB3 (ENSPANG00000008014) #27	ABCD1 (ENSPANG00000025399) #26	CCNQ (ENSPANG00000026424) #21	DUSP9 (ENSPANG00000004029) #22	PNCK (ENSPANG00000013747) #23	SLC6A8 (ENSPANG00000010089) #24	BCAP31 (ENSPANG00000001625) #25	ATP2B3 (ENSPANG00000014878) #20	BGN (ENSPANG00000022851) #19	HAUS7 (ENSPANG00000014066) #18	TREX2 (ENSPANG00000039672) #17	ZFP92 (ENSPANG00000006612) #16	ENSPANG00000035942	ENSPANG00000015246 #15	PNMA6F (ENSPANG00000035246)	ENSPANG00000040158	PNMA3 (ENSPANG00000008016)	PNMA5 (ENSPANG00000041264)	ZNF185 (ENSPANG00000011355)
Cercopithecinae_d	ANCESTRAL SPECIES	141								ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.e #21	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Sooty mangabey	MODERN SPECIES	286														ENSCATG00000032628	CCNQ (ENSCATG00000013187) #21	DUSP9 (ENSCATG00000009164) #22	ENSCATG00000003729	PNCK (ENSCATG00000041955) #23	SLC6A8 (ENSCATG00000001771) #24	BCAP31 (ENSCATG00000043253) #25	ABCD1 (ENSCATG00000042536) #26	PLXNB3 (ENSCATG00000037895) #27	SRPK3 (ENSCATG00000045096) #28	IDH3G (ENSCATG00000042112) #29	SSR4 (ENSCATG00000006344) #30	PDZD4 (ENSCATG00000043997) #31	L1CAM (ENSCATG00000041515) #32	AVPR2 (ENSCATG00000036647) #34	ARHGAP4 (ENSCATG00000042499) #35	NAA10 (ENSCATG00000038709) #36	RENBP (ENSCATG00000037009) #37
Drill	MODERN SPECIES	1411								PNMA6F (ENSMLEG00000035105)	ENSMLEG00000040255	PNMA6E (ENSMLEG00000041204)	ZFP92 (ENSMLEG00000013319) #16	HAUS7 (ENSMLEG00000038483) #18	BGN (ENSMLEG00000029067) #19	ATP2B3 (ENSMLEG00000032665) #20	CCNQ (ENSMLEG00000039950) #21	DUSP9 (ENSMLEG00000042559) #22	ENSMLEG00000027362	PNCK (ENSMLEG00000027716) #23	SLC6A8 (ENSMLEG00000042530) #24	BCAP31 (ENSMLEG00000042884) #25	ABCD1 (ENSMLEG00000041428) #26	PLXNB3 (ENSMLEG00000032454) #27	IDH3G (ENSMLEG00000038908) #29	SSR4 (ENSMLEG00000016802) #30	PDZD4 (ENSMLEG00000004595) #31	L1CAM (ENSMLEG00000036326) #32	AVPR2 (ENSMLEG00000042889) #34	ARHGAP4 (ENSMLEG00000038659) #35	NAA10 (ENSMLEG00000032424) #36	RENBP (ENSMLEG00000038487) #37	HCFC1 (ENSMLEG00000042451)
Vervet Monkey	MODERN SPECIES	203	ENSCSAG00000006992	CETN2 (ENSCSAG00000006984) #13	NSDHL (ENSCSAG00000006982) #14	ZNF185 (ENSCSAG00000006979)	PNMA5 (ENSCSAG00000000526)	PNMA3 (ENSCSAG00000000525)	MAGEA1 (ENSCSAG00000000524)	ENSCSAG00000006975	ENSCSAG00000006968 #15	ZFP92 (ENSCSAG00000006967) #16	HAUS7 (ENSCSAG00000006961) #18	ENSCSAG00000006955	BGN (ENSCSAG00000006954) #19	ATP2B3 (ENSCSAG00000006948) #20	CCNQ (ENSCSAG00000006940) #21	DUSP9 (ENSCSAG00000006926) #22	PNCK (ENSCSAG00000006923) #23	SLC6A8 (ENSCSAG00000006918) #24	BCAP31 (ENSCSAG00000006911) #25	PLXNB3 (ENSCSAG00000006893) #27	SRPK3 (ENSCSAG00000006884) #28	IDH3G (ENSCSAG00000006879) #29	SSR4 (ENSCSAG00000006874) #30	PDZD4 (ENSCSAG00000006871) #31	L1CAM (ENSCSAG00000006864) #32	AVPR2 (ENSCSAG00000006857) #34	ARHGAP4 (ENSCSAG00000006854) #35	NAA10 (ENSCSAG00000006823) #36	RENBP (ENSCSAG00000006814) #37	HCFC1 (ENSCSAG00000006809)	TMEM187 (ENSCSAG00000000523)
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.c #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a.f #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Cebidae	ANCESTRAL SPECIES	27	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.c #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a.f #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Marmoset	MODERN SPECIES	78	ENSCJAG00000016338 #13	NSDHL (ENSCJAG00000016347) #14	ZNF185 (ENSCJAG00000016363)	PNMA5 (ENSCJAG00000016373)	PNMA3 (ENSCJAG00000022542)	PWWP4 (ENSCJAG00000052872)	PNMA6F (ENSCJAG00000042286)	ENSCJAG00000019468	PNMA6E (ENSCJAG00000048415)	ZFP92 (ENSCJAG00000011538) #16	TREX2 (ENSCJAG00000011515) #17	HAUS7 (ENSCJAG00000036194) #18	BGN (ENSCJAG00000011493) #19	ATP2B3 (ENSCJAG00000011413) #20	ENSCJAG00000011407 #21	DUSP9 (ENSCJAG00000047408) #22	ENSCJAG00000081213 #23	ENSCJAG00000011356 #24	BCAP31 (ENSCJAG00000011348) #25	ABCD1 (ENSCJAG00000011337) #26	PLXNB3 (ENSCJAG00000011267) #27	SRPK3 (ENSCJAG00000011233) #28	PDZD4 (ENSCJAG00000011185) #31	SSR4 (ENSCJAG00000011167) #30	ENSCJAG00000074256	ENSCJAG00000022809	L1CAM (ENSCJAG00000011023) #32	ARHGAP4 (ENSCJAG00000011008) #35	AVPR2 (ENSCJAG00000011022) #34	NAA10 (ENSCJAG00000014506) #36	RENBP (ENSCJAG00000014500) #37
Cebidae_a	ANCESTRAL SPECIES	78							ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445.c #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a.f #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Capuchin	MODERN SPECIES	597								ENSCCAG00000024093	ENSCCAG00000020739	ENSCCAG00000030112	ZFP92 (ENSCCAG00000034129) #16	HAUS7 (ENSCCAG00000030265) #18	BGN (ENSCCAG00000018493) #19	ATP2B3 (ENSCCAG00000027100) #20	CCNQ (ENSCCAG00000029897) #21	DUSP9 (ENSCCAG00000033198) #22	ENSCCAG00000023569	PNCK (ENSCCAG00000021403) #23	SLC6A8 (ENSCCAG00000035546) #24	BCAP31 (ENSCCAG00000033187) #25	ABCD1 (ENSCCAG00000019717) #26	PLXNB3 (ENSCCAG00000024352) #27	SRPK3 (ENSCCAG00000021599) #28	SSR4 (ENSCCAG00000020454) #30	PDZD4 (ENSCCAG00000022158) #31	L1CAM (ENSCCAG00000032233) #32	AVPR2 (ENSCCAG00000028592) #34	ARHGAP4 (ENSCCAG00000025262) #35	ENSCCAG00000033959 #36	RENBP (ENSCCAG00000037940) #37	HCFC1 (ENSCCAG00000021425)
Bolivian squirrel monkey	MODERN SPECIES	236								PNMA6F (ENSSBOG00000015383)	ENSSBOG00000027546	ENSSBOG00000030661	ZFP92 (ENSSBOG00000028775) #16	HAUS7 (ENSSBOG00000028472) #18	BGN (ENSSBOG00000029980) #19	ATP2B3 (ENSSBOG00000032052) #20	ENSSBOG00000029871 #21	DUSP9 (ENSSBOG00000001225) #22	PNCK (ENSSBOG00000031039) #23	ENSSBOG00000033535 #24	ENSSBOG00000028295 #25	ABCD1 (ENSSBOG00000024968) #26	PLXNB3 (ENSSBOG00000025081) #27	SRPK3 (ENSSBOG00000024085) #28	IDH3G (ENSSBOG00000019899) #29	SSR4 (ENSSBOG00000022316) #30	PDZD4 (ENSSBOG00000033217) #31	L1CAM (ENSSBOG00000033301) #32	AVPR2 (ENSSBOG00000031595) #34	ARHGAP4 (ENSSBOG00000023946) #35	ENSSBOG00000020071 #36	RENBP (ENSSBOG00000034728) #37	HCFC1 (ENSSBOG00000034222)
Mas night monkey	MODERN SPECIES	1312								PNMA6F (ENSANAG00000025537)	ZNF275 (ENSANAG00000025581)	ENSANAG00000022983	ZFP92 (ENSANAG00000038344) #16	HAUS7 (ENSANAG00000022685) #18	BGN (ENSANAG00000033529) #19	ATP2B3 (ENSANAG00000032972) #20	ENSANAG00000000457 #21	DUSP9 (ENSANAG00000019919) #22	PNCK (ENSANAG00000010774) #23	ENSANAG00000037607 #24	BCAP31 (ENSANAG00000035222) #25	ABCD1 (ENSANAG00000035583) #26	PLXNB3 (ENSANAG00000036384) #27	SRPK3 (ENSANAG00000037077) #28	ENSANAG00000024077 #29	SSR4 (ENSANAG00000035059) #30	PDZD4 (ENSANAG00000026191) #31	L1CAM (ENSANAG00000035752) #32	AVPR2 (ENSANAG00000022496) #34	ARHGAP4 (ENSANAG00000023680) #35	NAA10 (ENSANAG00000019745) #36	RENBP (ENSANAG00000034421) #37	HCFC1 (ENSANAG00000030898)
Tarsier	MODERN SPECIES	2197									ENSTSYG00000000195	ENSTSYG00000036390	ENSTSYG00000031978 #16	HAUS7 (ENSTSYG00000030026) #18	BGN (ENSTSYG00000030156) #19	ATP2B3 (ENSTSYG00000034877) #20	FAM58A (ENSTSYG00000026900) #21	DUSP9 (ENSTSYG00000026755) #22	PNCK (ENSTSYG00000034891) #23	ENSTSYG00000033997 #24	BCAP31 (ENSTSYG00000003985) #25	ABCD1 (ENSTSYG00000028624) #26	PLXNB3 (ENSTSYG00000032080) #27
Strepsirrhini	ANCESTRAL SPECIES	45	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Lemuriformes	ANCESTRAL SPECIES	60	ENSGT00940000161201	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935.q.a #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Mouse lemur	MODERN SPECIES	169	GABRA3 (ENSMICG00000042718)	ENSMICG00000012692	ENSMICG00000013442	GABRQ (ENSMICG00000047310) #12	ENSMICG00000005862 #13	NSDHL (ENSMICG00000005868) #14	ZNF185 (ENSMICG00000005873)	ENSMICG00000046490	ENSMICG00000046759	ZFP92 (ENSMICG00000011893) #16	TREX2 (ENSMICG00000038278) #17	HAUS7 (ENSMICG00000000008) #18	BGN (ENSMICG00000000009) #19	ATP2B3 (ENSMICG00000000010) #20	CCNQ (ENSMICG00000032354) #21	DUSP9 (ENSMICG00000044469) #22	PNCK (ENSMICG00000013947) #23	ENSMICG00000003428 #24	BCAP31 (ENSMICG00000003437) #25	ABCD1 (ENSMICG00000003441) #26	PLXNB3 (ENSMICG00000003449) #27	SRPK3 (ENSMICG00000003464) #28	IDH3G (ENSMICG00000003472) #29	SSR4 (ENSMICG00000003476) #30	PDZD4 (ENSMICG00000027183) #31	L1CAM (ENSMICG00000003486) #32	AVPR2 (ENSMICG00000037091) #34	ARHGAP4 (ENSMICG00000016246) #35	NAA10 (ENSMICG00000010278) #36	RENBP (ENSMICG00000033869) #37	HCFC1 (ENSMICG00000016286)
Lemuriformes_a	ANCESTRAL SPECIES	110								ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Coquerels sifaka	MODERN SPECIES	882								ENSPCOG00000020542	ENSPCOG00000025588	ENSPCOG00000018479	TREX2 (ENSPCOG00000022646) #17	HAUS7 (ENSPCOG00000016936) #18	BGN (ENSPCOG00000018303) #19	ATP2B3 (ENSPCOG00000022001) #20	CCNQ (ENSPCOG00000020959) #21	DUSP9 (ENSPCOG00000021779) #22	PNCK (ENSPCOG00000019463) #23	ENSPCOG00000024763 #24	BCAP31 (ENSPCOG00000017960) #25	ABCD1 (ENSPCOG00000016908) #26	PLXNB3 (ENSPCOG00000024468) #27	SRPK3 (ENSPCOG00000018569) #28	IDH3G (ENSPCOG00000023374) #29	SSR4 (ENSPCOG00000028866) #30	PDZD4 (ENSPCOG00000025180) #31	L1CAM (ENSPCOG00000010437) #32	AVPR2 (ENSPCOG00000008409) #34	ARHGAP4 (ENSPCOG00000009927) #35	ENSPCOG00000027024 #36	RENBP (ENSPCOG00000013414) #37	HCFC1 (ENSPCOG00000028065)
Greater bamboo lemur	MODERN SPECIES	277							LARP7 (ENSPSMG00000003620)	ANK2 (ENSPSMG00000005110)	CAMK2D (ENSPSMG00000007663)	ARSJ (ENSPSMG00000008750)	ATP2B3 (ENSPSMG00000009254) #20	BGN (ENSPSMG00000009998) #19	HAUS7 (ENSPSMG00000010024) #18	TREX2 (ENSPSMG00000010030) #17	ZFP92 (ENSPSMG00000010034) #16	DUSP9 (ENSPSMG00000010039) #22	PNCK (ENSPSMG00000010066) #23	ENSPSMG00000010151 #24	ENSPSMG00000010220
Bushbaby	MODERN SPECIES	364					ENSOGAG00000029555	ENSOGAG00000030548	ENSOGAG00000032682	ENSOGAG00000031649	ZFP92 (ENSOGAG00000029963) #16	TREX2 (ENSOGAG00000033175) #17	HAUS7 (ENSOGAG00000008917) #18	ENSOGAG00000029324	BGN (ENSOGAG00000008920) #19	ATP2B3 (ENSOGAG00000008921) #20	ENSOGAG00000033279 #21	DUSP9 (ENSOGAG00000002412) #22	PNCK (ENSOGAG00000006718) #23	ENSOGAG00000031270 #24	BCAP31 (ENSOGAG00000006721) #25	ABCD1 (ENSOGAG00000027153) #26	PLXNB3 (ENSOGAG00000003133) #27	SRPK3 (ENSOGAG00000003138) #28	ENSOGAG00000006735 #29	SSR4 (ENSOGAG00000006738) #30	PDZD4 (ENSOGAG00000006741) #31	L1CAM (ENSOGAG00000015077) #32	AVPR2 (ENSOGAG00000030887) #34	ARHGAP4 (ENSOGAG00000015087) #35	NAA10 (ENSOGAG00000013263) #36	RENBP (ENSOGAG00000032778) #37	HCFC1 (ENSOGAG00000015100)
Laurasiatheria	ANCESTRAL SPECIES	26	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161880 #22
Hedgehog	MODERN SPECIES	13152																DUSP9 (ENSEEUG00000001589) #22
Common shrew	MODERN SPECIES	2073																DUSP9 (ENSSARG00000007756) #22
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Suina	ANCESTRAL SPECIES	7	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00910000144363.b	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Chacoan peccary	MODERN SPECIES	64													BGN (ENSCWAG00000015339) #19	ATP2B3 (ENSCWAG00000014036) #20	CCNQ (ENSCWAG00000013960) #21	DUSP9 (ENSCWAG00000013930) #22	PNCK (ENSCWAG00000013628) #23	ENSCWAG00000013485 #24	BCAP31 (ENSCWAG00000013428) #25	ABCD1 (ENSCWAG00000013367) #26	PLXNB3 (ENSCWAG00000013064) #27	SRPK3 (ENSCWAG00000012244) #28	IDH3G (ENSCWAG00000012166) #29	SSR4 (ENSCWAG00000012103) #30	PDZD4 (ENSCWAG00000011881) #31	L1CAM (ENSCWAG00000010938) #32	AVPR2 (ENSCWAG00000010837) #34	ARHGAP4 (ENSCWAG00000010083) #35	NAA10 (ENSCWAG00000009933) #36	RENBP (ENSCWAG00000009675) #37	HCFC1 (ENSCWAG00000009363)
Pig	MODERN SPECIES	300	ZNF185 (ENSSSCG00000012759)	PNMA5 (ENSSSCG00000038758)	ENSSSCG00000012762	ENSSSCG00000048272	ENSSSCG00000059750	ENSSSCG00000057031	ENSSSCG00000035599	ENSSSCG00000049239	ENSSSCG00000030075	ZFP92 (ENSSSCG00000012768) #16	HAUS7 (ENSSSCG00000012767) #18	BGN (ENSSSCG00000012766) #19	SLC6A8 (ENSSSCG00000012771) #24	ATP2B3 (ENSSSCG00000012769) #20	CCNQ (ENSSSCG00000012770) #21	DUSP9 (ENSSSCG00000012774) #22	PNCK (ENSSSCG00000012773) #23	BCAP31 (ENSSSCG00000012772) #25	ABCD1 (ENSSSCG00000012779) #26	PLXNB3 (ENSSSCG00000012780) #27	ENSSSCG00000024676 #28	ENSSSCG00000053900 #28	IDH3G (ENSSSCG00000012783) #29	SSR4 (ENSSSCG00000012784) #30	PDZD4 (ENSSSCG00000012785) #31	L1CAM (ENSSSCG00000012787) #32	AVPR2 (ENSSSCG00000012789) #34	ARHGAP4 (ENSSSCG00000012790) #35	NAA10 (ENSSSCG00000012791) #36	RENBP (ENSSSCG00000012792) #37	HCFC1 (ENSSSCG00000012793)
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Cetacea	ANCESTRAL SPECIES	19	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v.e.a #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v.e.a #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT00950000185059.b.a.a	ENSGT00940000153582.b.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v.e.a #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00390000013740 #37	ENSGT00940000161383	ENSGT00390000011272
Beluga whale	MODERN SPECIES	139			CETN2 (ENSDLEG00000008486) #13	NSDHL (ENSDLEG00000008500) #14	ZNF185 (ENSDLEG00000008571)	ENSDLEG00000008777	ENSDLEG00000008821	ENSDLEG00000008874	ENSDLEG00000008903 #15	ZFP92 (ENSDLEG00000008939) #16	TREX2 (ENSDLEG00000008947) #17	HAUS7 (ENSDLEG00000008961) #18	BGN (ENSDLEG00000009001) #19	ATP2B3 (ENSDLEG00000009068) #20	CCNQ (ENSDLEG00000009254) #21	DUSP9 (ENSDLEG00000009275) #22	PNCK (ENSDLEG00000009302) #23	ENSDLEG00000009357 #24	BCAP31 (ENSDLEG00000009436) #25	ABCD1 (ENSDLEG00000009490) #26	PLXNB3 (ENSDLEG00000009548) #27	SRPK3 (ENSDLEG00000009748) #28	IDH3G (ENSDLEG00000010539) #29	SSR4 (ENSDLEG00000010578) #30	PDZD4 (ENSDLEG00000010618) #31	L1CAM (ENSDLEG00000010633) #32	AVPR2 (ENSDLEG00000010715) #34	ARHGAP4 (ENSDLEG00000010745) #35	RENBP (ENSDLEG00000010782) #37	HCFC1 (ENSDLEG00000010826)	TMEM187 (ENSDLEG00000010884)
Narwhal	MODERN SPECIES	309	MAGEA10 (ENSMMNG00015011533)	GABRA3 (ENSMMNG00015011549)	GABRQ (ENSMMNG00015011628) #12	CETN2 (ENSMMNG00015011652) #13	NSDHL (ENSMMNG00015011668) #14	ENSMMNG00015011709	ENSMMNG00015011751	PNMA5 (ENSMMNG00015011762)	ZNF275 (ENSMMNG00015011779)	ENSMMNG00015011848 #16	TREX2 (ENSMMNG00015011851) #17	HAUS7 (ENSMMNG00015011870) #18	BGN (ENSMMNG00015011917) #19	ATP2B3 (ENSMMNG00015011983) #20	CCNQ (ENSMMNG00015012078) #21	DUSP9 (ENSMMNG00015012090) #22	PNCK (ENSMMNG00015012107) #23	BCAP31 (ENSMMNG00015012134) #25	ABCD1 (ENSMMNG00015012167) #26	PLXNB3 (ENSMMNG00015012205) #27	SRPK3 (ENSMMNG00015012303) #28	IDH3G (ENSMMNG00015012488) #29	SSR4 (ENSMMNG00015012518) #30	PDZD4 (ENSMMNG00015012532) #31	L1CAM (ENSMMNG00015012599) #32	AVPR2 (ENSMMNG00015012757) #34	ARHGAP4 (ENSMMNG00015012794) #35	RENBP (ENSMMNG00015012853) #37	HCFC1 (ENSMMNG00015012895)	TMEM187 (ENSMMNG00015012935)	IRAK1 (ENSMMNG00015012947)
Vaquita	MODERN SPECIES	34	ENSPSNG00000016487	CETN2 (ENSPSNG00000016540) #13	NSDHL (ENSPSNG00000016593) #14	ENSPSNG00000016682	ENSPSNG00000016703	ENSPSNG00000016766	ENSPSNG00000016858	ENSPSNG00000016906	ZNF275 (ENSPSNG00000016963)	ZFP92 (ENSPSNG00000017091) #16	TREX2 (ENSPSNG00000017121) #17	HAUS7 (ENSPSNG00000017146) #18	BGN (ENSPSNG00000017293) #19	ATP2B3 (ENSPSNG00000017785) #20	CCNQ (ENSPSNG00000020074) #21	DUSP9 (ENSPSNG00000020127) #22	PNCK (ENSPSNG00000020162) #23	ENSPSNG00000020216 #24	BCAP31 (ENSPSNG00000020287) #25	ABCD1 (ENSPSNG00000020339) #26	PLXNB3 (ENSPSNG00000020397) #27	SRPK3 (ENSPSNG00000020624) #28	IDH3G (ENSPSNG00000021007) #29	SSR4 (ENSPSNG00000021050) #30	PDZD4 (ENSPSNG00000021105) #31	L1CAM (ENSPSNG00000021249) #32	AVPR2 (ENSPSNG00000021500) #34	ARHGAP4 (ENSPSNG00000021560) #35	NAA10 (ENSPSNG00000021621) #36	ENSPSNG00000021660 #37	HCFC1 (ENSPSNG00000021713)
Dolphin	MODERN SPECIES	1323														ATP2B3 (ENSTTRG00000011664) #20	CCNQ (ENSTTRG00000011680) #21	DUSP9 (ENSTTRG00000011684) #22	PNCK (ENSTTRG00000011687) #23	ENSTTRG00000011689 #24	BCAP31 (ENSTTRG00000011698) #25	ABCD1 (ENSTTRG00000011702) #26	PLXNB3 (ENSTTRG00000011705) #27	SRPK3 (ENSTTRG00000011724) #28	IDH3G (ENSTTRG00000011728) #29
Sperm whale	MODERN SPECIES	13	GABRQ (ENSPCTG00005018852) #12	ENSPCTG00005018953	ENSPCTG00005018999	ENSPCTG00005019029	ENSPCTG00005019056	CETN2 (ENSPCTG00005019083) #13	NSDHL (ENSPCTG00005019131) #14	ZNF185 (ENSPCTG00005019207)	ENSPCTG00005019540	ENSPCTG00005019569	ZFP92 (ENSPCTG00005019580) #16	HAUS7 (ENSPCTG00005019634) #18	BGN (ENSPCTG00005019735) #19	ATP2B3 (ENSPCTG00005019806) #20	CCNQ (ENSPCTG00005020427) #21	DUSP9 (ENSPCTG00005020457) #22	PNCK (ENSPCTG00005020491) #23	SLC6A8 (ENSPCTG00005020619) #24	BCAP31 (ENSPCTG00005020665) #25	ABCD1 (ENSPCTG00005020693) #26	PLXNB3 (ENSPCTG00005020721) #27	SRPK3 (ENSPCTG00005020896) #28	IDH3G (ENSPCTG00005021222) #29	SSR4 (ENSPCTG00005021260) #30	PDZD4 (ENSPCTG00005021324) #31	L1CAM (ENSPCTG00005021438) #32	AVPR2 (ENSPCTG00005021602) #34	ARHGAP4 (ENSPCTG00005021658) #35	NAA10 (ENSPCTG00005021859) #36	RENBP (ENSPCTG00005021884) #37	HCFC1 (ENSPCTG00005021915)
Blue whale	MODERN SPECIES	40	GABRQ (ENSBMSG00010021381) #12	ENSBMSG00010021410	ENSBMSG00010021416	ENSBMSG00010021420	ENSBMSG00010021428	ENSBMSG00010021440	CETN2 (ENSBMSG00010021445) #13	NSDHL (ENSBMSG00010021450) #14	ZNF185 (ENSBMSG00010016223)	ZFP92 (ENSBMSG00010016386) #16	TREX2 (ENSBMSG00010016424) #17	HAUS7 (ENSBMSG00010016441) #18	BGN (ENSBMSG00010016563) #19	ATP2B3 (ENSBMSG00010016642) #20	CCNQ (ENSBMSG00010017295) #21	DUSP9 (ENSBMSG00010017328) #22	PNCK (ENSBMSG00010017371) #23	ENSBMSG00010017516 #24	BCAP31 (ENSBMSG00010017577) #25	ABCD1 (ENSBMSG00010017634) #26	PLXNB3 (ENSBMSG00010017695) #27	SRPK3 (ENSBMSG00010017917) #28	IDH3G (ENSBMSG00010018140) #29	SSR4 (ENSBMSG00010018296) #30	PDZD4 (ENSBMSG00010018349) #31	L1CAM (ENSBMSG00010018510) #32	AVPR2 (ENSBMSG00010018770) #34	ARHGAP4 (ENSBMSG00010018853) #35	NAA10 (ENSBMSG00010019439) #36	RENBP (ENSBMSG00010019364) #37	HCFC1 (ENSBMSG00010019528)
Pecora	ANCESTRAL SPECIES	38						ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Yarkand deer	MODERN SPECIES	1323	TCEAL1 (ENSCHYG00000015273)	ENSCHYG00000015211	ENSCHYG00000026699	ENSCHYG00000026697	ENSCHYG00000026691	ENSCHYG00000026686	ENSCHYG00000026676	ENSCHYG00000026670 #15	ENSCHYG00000026662	ENSCHYG00000026653 #16	TREX2 (ENSCHYG00000026645) #17	HAUS7 (ENSCHYG00000026596) #18	BGN (ENSCHYG00000026554) #19	ATP2B3 (ENSCHYG00000026445) #20	CCNQ (ENSCHYG00000026390) #21	DUSP9 (ENSCHYG00000026372) #22	PNCK (ENSCHYG00000026358) #23	ENSCHYG00000026332 #24	ENSCHYG00000026299 #25	ABCD1 (ENSCHYG00000026259) #26	PLXNB3 (ENSCHYG00000026217) #27	SRPK3 (ENSCHYG00000026187) #28	ENSCHYG00000026148 #29	ENSCHYG00000026124 #30	PDZD4 (ENSCHYG00000026107) #31	L1CAM (ENSCHYG00000025877) #32	AVPR2 (ENSCHYG00000025838) #34	ARHGAP4 (ENSCHYG00000025566) #35	ENSCHYG00000025281 #36	RENBP (ENSCHYG00000025248) #37	HCFC1 (ENSCHYG00000025112)
Percora_a	ANCESTRAL SPECIES	35						ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Siberian musk deer	MODERN SPECIES	14							ENSMMSG00000017989 #15	ENSMMSG00000017963	ENSMMSG00000017951	ENSMMSG00000017851	TREX2 (ENSMMSG00000017821) #17	HAUS7 (ENSMMSG00000017752) #18	BGN (ENSMMSG00000017708) #19	ATP2B3 (ENSMMSG00000017117) #20	CCNQ (ENSMMSG00000017061) #21	DUSP9 (ENSMMSG00000017038) #22	PNCK (ENSMMSG00000016992) #23	ENSMMSG00000016948 #24	BCAP31 (ENSMMSG00000016925) #25	ABCD1 (ENSMMSG00000016894) #26	PLXNB3 (ENSMMSG00000016798) #27	SRPK3 (ENSMMSG00000016477) #28	IDH3G (ENSMMSG00000016400) #29	SSR4 (ENSMMSG00000016336) #30	PDZD4 (ENSMMSG00000016210) #31	L1CAM (ENSMMSG00000015717) #32	AVPR2 (ENSMMSG00000015654) #34	ARHGAP4 (ENSMMSG00000015607) #35	NAA10 (ENSMMSG00000015542) #36	RENBP (ENSMMSG00000015497) #37	HCFC1 (ENSMMSG00000015453)
Bovidae	ANCESTRAL SPECIES	33						ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Bovinae	ANCESTRAL SPECIES	46							ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Bos	ANCESTRAL SPECIES	36	ENSGT00390000016992.s	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000235238.e.b	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Bos_b	ANCESTRAL SPECIES	31	ENSGT00940000154783.f	ENSGT00390000016992.s	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Cow	MODERN SPECIES	177	CMC4 (ENSBTAG00000007813)	FUNDC2 (ENSBTAG00000016977)	F8 (ENSBTAG00000010726)	ENSBTAG00000033167	MPP1 (ENSBTAG00000013046)	DKC1 (ENSBTAG00000013045)	GAB3 (ENSBTAG00000013044)	ENSBTAG00000023820	ENSBTAG00000020185 #15	ENSBTAG00000047917	ENSBTAG00000050830 #16	HAUS7 (ENSBTAG00000014095) #18	BGN (ENSBTAG00000005250) #19	ATP2B3 (ENSBTAG00000000520) #20	CCNQ (ENSBTAG00000011350) #21	DUSP9 (ENSBTAG00000008319) #22	PNCK (ENSBTAG00000017430) #23	SLC6A8 (ENSBTAG00000009959) #24	BCAP31 (ENSBTAG00000020547) #25	ABCD1 (ENSBTAG00000020551) #26	PLXNB3 (ENSBTAG00000010146) #27	SRPK3 (ENSBTAG00000001058) #28	IDH3G (ENSBTAG00000001059) #29	SSR4 (ENSBTAG00000021421) #30	PDZD4 (ENSBTAG00000021422) #31	ENSBTAG00000038379	L1CAM (ENSBTAG00000013462) #32	AVPR2 (ENSBTAG00000047138) #34	ARHGAP4 (ENSBTAG00000047531) #35	NAA10 (ENSBTAG00000047702) #36	RENBP (ENSBTAG00000047827) #37
Hybrid Bos Indicus	MODERN SPECIES	315	FUNDC2 (ENSBIXG00005006322)	ENSBIXG00005011325	F8 (ENSBIXG00005006715)	MPP1 (ENSBIXG00005011616)	DKC1 (ENSBIXG00005011665)	GAB3 (ENSBIXG00005011700)	ENSBIXG00005011731	ENSBIXG00005001157 #15	ENSBIXG00005011758	ENSBIXG00005011766 #16	HAUS7 (ENSBIXG00005001172) #18	ENSBIXG00005011824	BGN (ENSBIXG00005011869) #19	ATP2B3 (ENSBIXG00005001219) #20	CCNQ (ENSBIXG00005012024) #21	ENSBIXG00005012054 #22	PNCK (ENSBIXG00005012167) #23	ENSBIXG00005012235 #24	BCAP31 (ENSBIXG00005012267) #25	ABCD1 (ENSBIXG00005001289) #26	PLXNB3 (ENSBIXG00005012308) #27	SRPK3 (ENSBIXG00005012339) #28	SSR4 (ENSBIXG00005012375) #30	PDZD4 (ENSBIXG00005012442) #31	ENSBIXG00005012493	L1CAM (ENSBIXG00005012618) #32	AVPR2 (ENSBIXG00005012700) #34	ARHGAP4 (ENSBIXG00005001429) #35	NAA10 (ENSBIXG00005012916) #36	RENBP (ENSBIXG00005007005) #37	HCFC1 (ENSBIXG00005013025)
Bos_a	ANCESTRAL SPECIES	39	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000235238.e.b	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Domestic yak	MODERN SPECIES	69	F8 (ENSBGRG00000024985)	ENSBGRG00000017378	ENSBGRG00000017426	MPP1 (ENSBGRG00000017459)	DKC1 (ENSBGRG00000017777)	GAB3 (ENSBGRG00000018202)	ENSBGRG00000018336	ENSBGRG00000018361	ENSBGRG00000018441 #15	ENSBGRG00000018662 #16	HAUS7 (ENSBGRG00000018702) #18	ENSBGRG00000018982	BGN (ENSBGRG00000019034) #19	ATP2B3 (ENSBGRG00000019084) #20	CCNQ (ENSBGRG00000019445) #21	DUSP9 (ENSBGRG00000019532) #22	ENSBGRG00000019589 #23	ENSBGRG00000019737 #24	BCAP31 (ENSBGRG00000019806) #25	ABCD1 (ENSBGRG00000019899) #26	SRPK3 (ENSBGRG00000020582) #28	IDH3G (ENSBGRG00000020629) #29	ENSBGRG00000020770 #30	PDZD4 (ENSBGRG00000020897) #31	ENSBGRG00000020944	L1CAM (ENSBGRG00000020974) #32	AVPR2 (ENSBGRG00000021537) #34	ARHGAP4 (ENSBGRG00000021595) #35	NAA10 (ENSBGRG00000021764) #36	RENBP (ENSBGRG00000021852) #37	HCFC1 (ENSBGRG00000021965)
Wild yak	MODERN SPECIES	2346																DUSP9 (ENSBMUG00000011871) #22	PNCK (ENSBMUG00000011937) #23	ENSBMUG00000011967 #24	BCAP31 (ENSBMUG00000011987) #25	ABCD1 (ENSBMUG00000012003) #26	PLXNB3 (ENSBMUG00000012298) #27	SRPK3 (ENSBMUG00000012477) #28	IDH3G (ENSBMUG00000012493) #29	SSR4 (ENSBMUG00000012499) #30	PDZD4 (ENSBMUG00000012542) #31	L1CAM (ENSBMUG00000012610) #32	AVPR2 (ENSBMUG00000012644) #34	ARHGAP4 (ENSBMUG00000012757) #35	NAA10 (ENSBMUG00000012855) #36	RENBP (ENSBMUG00000012951) #37
Caprinae	ANCESTRAL SPECIES	45	ENSGT00940000161201	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Goat	MODERN SPECIES	65															CCNQ (ENSCHIG00000016499) #21	DUSP9 (ENSCHIG00000012585) #22	PNCK (ENSCHIG00000003212) #23	ENSCHIG00000021442 #24	BCAP31 (ENSCHIG00000012576) #25	ABCD1 (ENSCHIG00000020085) #26	PLXNB3 (ENSCHIG00000012234) #27	SRPK3 (ENSCHIG00000002559) #28	IDH3G (ENSCHIG00000016785) #29	SSR4 (ENSCHIG00000006805) #30	PDZD4 (ENSCHIG00000000364) #31
Rambouillet Sheep	MODERN SPECIES	205	CNGA2 (ENSOARG00020006792)	GABRA3 (ENSOARG00020006461)	CETN2 (ENSOARG00020025056) #13	NSDHL (ENSOARG00020025037) #14	ENSOARG00020024990	ENSOARG00020024988	ENSOARG00020024977	ENSOARG00020024974	ENSOARG00020024952	ZFP92 (ENSOARG00020024935) #16	TREX2 (ENSOARG00020024928) #17	HAUS7 (ENSOARG00020024905) #18	BGN (ENSOARG00020024895) #19	ATP2B3 (ENSOARG00020024861) #20	CCNQ (ENSOARG00020024846) #21	DUSP9 (ENSOARG00020024837) #22	PNCK (ENSOARG00020024721) #23	ENSOARG00020024643 #24	BCAP31 (ENSOARG00020024614) #25	ABCD1 (ENSOARG00020024584) #26	PLXNB3 (ENSOARG00020024564) #27	IDH3G (ENSOARG00020024407) #29	SSR4 (ENSOARG00020024383) #30	PDZD4 (ENSOARG00020024315) #31	L1CAM (ENSOARG00020023921) #32	AVPR2 (ENSOARG00020023848) #34	ARHGAP4 (ENSOARG00020023326) #35	NAA10 (ENSOARG00020023246) #36	RENBP (ENSOARG00020023053) #37	HCFC1 (ENSOARG00020022415)	TMEM187 (ENSOARG00020022375)
Camelidae	ANCESTRAL SPECIES																	ENSGT00940000161880 #22
Arabian camel	MODERN SPECIES	204	SRPK3 (ENSCDRG00005020984) #28	ABCD1 (ENSCDRG00005020958) #26	BCAP31 (ENSCDRG00005020943) #25	ENSCDRG00005020937 #24	PNCK (ENSCDRG00005020913) #23	CCNQ (ENSCDRG00005020899) #21	ATP2B3 (ENSCDRG00005020884) #20	BGN (ENSCDRG00005020868) #19	HAUS7 (ENSCDRG00005020839) #18	TREX2 (ENSCDRG00005020829) #17	ZFP92 (ENSCDRG00005020817) #16	ENSCDRG00005020767 #15	ENSCDRG00005020729	ENSCDRG00005020724	ENSCDRG00005020712	ENSCDRG00005020708 #22	ENSCDRG00005020698	PNMA6A (ENSCDRG00005020688)	ENSCDRG00005020680	ZNF185 (ENSCDRG00005018034)	NSDHL (ENSCDRG00005017818) #14	CETN2 (ENSCDRG00005017787) #13	GABRQ (ENSCDRG00005017608) #12	GABRA3 (ENSCDRG00005017512)	MAGEA10 (ENSCDRG00005017492)	GABRE (ENSCDRG00005017444)	CNGA2 (ENSCDRG00005017401)	FATE1 (ENSCDRG00005017356)	PRRG3 (ENSCDRG00005017332)	ENSCDRG00005017295	GPR50 (ENSCDRG00005017269)
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Carnivora	ANCESTRAL SPECIES	11	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Caniformia	ANCESTRAL SPECIES	22	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Caniformia_b	ANCESTRAL SPECIES	27	ENSGT00940000162167 #12	ENSGT00940000163823.e.b	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Ursidae	ANCESTRAL SPECIES	45	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C.b #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.h #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Ursus	ANCESTRAL SPECIES	211							ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C.b #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000155869.v #24	ENSGT00390000011863.c.h #25	ENSGT00950000182955.a.b.a #26	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31
Polar bear	MODERN SPECIES	330								ENSUMAG00000021273	ENSUMAG00000021267	ENSUMAG00000021264	ENSUMAG00000021253	HAUS7 (ENSUMAG00000021248) #18	BGN (ENSUMAG00000021244) #19	ATP2B3 (ENSUMAG00000020942) #20	CCNQ (ENSUMAG00000020894) #21	DUSP9 (ENSUMAG00000020891) #22	ENSUMAG00000020857 #24	BCAP31 (ENSUMAG00000020844) #25	SRPK3 (ENSUMAG00000020820) #28	IDH3G (ENSUMAG00000020814) #29	SSR4 (ENSUMAG00000020804) #30	NAA10 (ENSUMAG00000020773) #36	RENBP (ENSUMAG00000020768) #37	ENSUMAG00000020761	TMEM187 (ENSUMAG00000020759)	ENSUMAG00000020747	ENSUMAG00000020714	TEX28 (ENSUMAG00000020707)	TKTL1 (ENSUMAG00000020693)	EMD (ENSUMAG00000020684)	FLNA (ENSUMAG00000019645)
American black bear	MODERN SPECIES	6716																DUSP9 (ENSUAMG00000015423) #22
Giant Panda	MODERN SPECIES	2288	GABRE (ENSAMEG00000001520)	ENSAMEG00000012142	GABRQ (ENSAMEG00000024249) #12	CETN2 (ENSAMEG00000000364) #13	NSDHL (ENSAMEG00000000343) #14	ZNF185 (ENSAMEG00000000294)	ENSAMEG00000000291	ENSAMEG00000024870 #15	ENSAMEG00000029889	ENSAMEG00000008936 #16	TREX2 (ENSAMEG00000008933) #17	HAUS7 (ENSAMEG00000008916) #18	BGN (ENSAMEG00000008895) #19	ATP2B3 (ENSAMEG00000008798) #20	CCNQ (ENSAMEG00000008792) #21	DUSP9 (ENSAMEG00000023668) #22	PNCK (ENSAMEG00000008740) #23	BCAP31 (ENSAMEG00000008719) #25	ABCD1 (ENSAMEG00000008692) #26	PLXNB3 (ENSAMEG00000018468) #27	SRPK3 (ENSAMEG00000018467) #28	IDH3G (ENSAMEG00000018466) #29	SSR4 (ENSAMEG00000018465) #30	PDZD4 (ENSAMEG00000018464) #31	ENSAMEG00000009528	L1CAM (ENSAMEG00000018461) #32	AVPR2 (ENSAMEG00000018460) #34	ARHGAP4 (ENSAMEG00000018458) #35	NAA10 (ENSAMEG00000018457) #36	RENBP (ENSAMEG00000018452) #37	HCFC1 (ENSAMEG00000018450)
Mustelinae	ANCESTRAL SPECIES	108							ENSGT00390000001700.a.b.b	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
American mink	MODERN SPECIES	402								ENSNVIG00000024011	ENSNVIG00000024008	ENSNVIG00000024007	ZFP92 (ENSNVIG00000024006) #16	HAUS7 (ENSNVIG00000024002) #18	BGN (ENSNVIG00000023999) #19	ATP2B3 (ENSNVIG00000023990) #20	CCNQ (ENSNVIG00000023988) #21	DUSP9 (ENSNVIG00000023986) #22	PNCK (ENSNVIG00000023984) #23	ENSNVIG00000023983 #24	BAP31 (ENSNVIG00000023982) #25	ABCD1 (ENSNVIG00000023981) #26	PLXNB3 (ENSNVIG00000023976) #27	SRPK3 (ENSNVIG00000023970) #28	IDH3G (ENSNVIG00000023966) #29	SSR4 (ENSNVIG00000023964) #30	PDZD4 (ENSNVIG00000023958) #31	L1CAM (ENSNVIG00000023921) #32	AVPR2 (ENSNVIG00000023918) #34	ARHGAP4 (ENSNVIG00000023893) #35	NAA10 (ENSNVIG00000023879) #36	RENBP (ENSNVIG00000023874) #37	HCFC1 (ENSNVIG00000023869)
Ferret	MODERN SPECIES	463				ENSMPUG00000019555	ENSMPUG00000019553	ENSMPUG00000016177	ZFP92 (ENSMPUG00000016176) #16	TREX2 (ENSMPUG00000019552) #17	HAUS7 (ENSMPUG00000016175) #18	ENSMPUG00000016174	BGN (ENSMPUG00000016173) #19	ATP2B3 (ENSMPUG00000016170) #20	CCNQ (ENSMPUG00000016164) #21	ENSMPUG00000016162	ENSMPUG00000016150	DUSP9 (ENSMPUG00000016151) #22	PNCK (ENSMPUG00000016148) #23	ENSMPUG00000016146 #24	ENSMPUG00000019549	ENSMPUG00000019547	ENSMPUG00000019545	ENSMPUG00000016145	ENSMPUG00000019543	GAB3 (ENSMPUG00000016143)	MPP1 (ENSMPUG00000016141)	F8 (ENSMPUG00000016139)	DKC1 (ENSMPUG00000016136)	BRCC3 (ENSMPUG00000016134)	ENSMPUG00000016133	ENSMPUG00000016131	RAB39B (ENSMPUG00000016129)
Canidae	ANCESTRAL SPECIES	50	ENSGT00940000163823.e.b.a.b	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b.n	ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b.m.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Canis_lupus	ANCESTRAL SPECIES	22	ENSGT00940000155935.g #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b.n	ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b.m.b.a	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Dog	MODERN SPECIES	144	ENSCAFG00845022365	ENSCAFG00845022410	ENSCAFG00845022448	ENSCAFG00845022483 #18	ENSCAFG00845022582	ENSCAFG00845022611	ENSCAFG00845022640	ENSCAFG00845022693	ENSCAFG00845022737	ENSCAFG00845022788	ENSCAFG00845022808	ZFP92 (ENSCAFG00845023007) #16	BGN (ENSCAFG00845023053) #19	ATP2B3 (ENSCAFG00845023172) #20	CCNQ (ENSCAFG00845023588) #21	DUSP9 (ENSCAFG00845023663) #22	ENSCAFG00845023730 #23	ENSCAFG00845023957 #24	BCAP31 (ENSCAFG00845024213) #25	ABCD1 (ENSCAFG00845024327) #26	PLXNB3 (ENSCAFG00845024556) #27	SRPK3 (ENSCAFG00845024967) #28	IDH3G (ENSCAFG00845025145) #29	SSR4 (ENSCAFG00845025375) #30	PDZD4 (ENSCAFG00845025486) #31	L1CAM (ENSCAFG00845025647) #32	AVPR2 (ENSCAFG00845026015) #34	ARHGAP4 (ENSCAFG00845026108) #35	RENBP (ENSCAFG00845026554) #36	HCFC1 (ENSCAFG00845026790)	TMEM187 (ENSCAFG00845027090)
Dingo	MODERN SPECIES	383	ENSCAFG00020023229	GABRQ (ENSCAFG00020023222) #12	ENSCAFG00020023218 #13	NSDHL (ENSCAFG00020023215) #14	ZNF185 (ENSCAFG00020023207)	ENSCAFG00020023204	ENSCAFG00020023200	ENSCAFG00020023197	ENSCAFG00020023196	ENSCAFG00020023194 #16	TREX2 (ENSCAFG00020023190) #17	HAUS7 (ENSCAFG00020023188) #18	BGN (ENSCAFG00020023184) #19	ATP2B3 (ENSCAFG00020022993) #20	CCNQ (ENSCAFG00020022953) #21	DUSP9 (ENSCAFG00020022952) #22	PNCK (ENSCAFG00020022950) #23	ENSCAFG00020022949 #24	BCAP31 (ENSCAFG00020022946) #25	ABCD1 (ENSCAFG00020022942) #26	PLXNB3 (ENSCAFG00020022936) #27	SRPK3 (ENSCAFG00020022932) #28	IDH3G (ENSCAFG00020022931) #29	SSR4 (ENSCAFG00020022930) #30	PDZD4 (ENSCAFG00020022928) #31	L1CAM (ENSCAFG00020022925) #32	AVPR2 (ENSCAFG00020022923) #34	ARHGAP4 (ENSCAFG00020022156) #35	NAA10 (ENSCAFG00020022123) #36	RENBP (ENSCAFG00020022111) #37	HCFC1 (ENSCAFG00020022091)
Red fox	MODERN SPECIES	263							ENSVVUG00000029721	ENSVVUG00000029719	ENSVVUG00000029716	ZFP92 (ENSVVUG00000029715) #16	TREX2 (ENSVVUG00000029714) #17	HAUS7 (ENSVVUG00000029713) #18	BGN (ENSVVUG00000029707) #19	ATP2B3 (ENSVVUG00000029706) #20	CCNQ (ENSVVUG00000029705) #21	DUSP9 (ENSVVUG00000029702) #22	PNCK (ENSVVUG00000029700) #23	ENSVVUG00000029699 #24	ENSVVUG00000029696 #25	ENSVVUG00000029695 #26	ENSVVUG00000029694 #26	PLXNB3 (ENSVVUG00000029634) #27	IDH3G (ENSVVUG00000029622) #29	ENSVVUG00000029621 #30	PDZD4 (ENSVVUG00000029620) #31	L1CAM (ENSVVUG00000029611) #32	AVPR2 (ENSVVUG00000029607) #34	ARHGAP4 (ENSVVUG00000029605) #35	NAA10 (ENSVVUG00000029603) #36	RENBP (ENSVVUG00000029602) #37	HCFC1 (ENSVVUG00000029596)
Felidae	ANCESTRAL SPECIES	29								ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Panthera	ANCESTRAL SPECIES	56								ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Panthera_a	ANCESTRAL SPECIES	65								ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
lion	MODERN SPECIES	50											TREX2 (ENSPLOG00000017143) #17	ENSPLOG00000017109 #18	BGN (ENSPLOG00000017044) #19	ATP2B3 (ENSPLOG00000016345) #20	CCNQ (ENSPLOG00000016196) #21	DUSP9 (ENSPLOG00000016155) #22	PNCK (ENSPLOG00000015960) #23	ENSPLOG00000015847 #24	BCAP31 (ENSPLOG00000015741) #25	ABCD1 (ENSPLOG00000015686) #26	PLXNB3 (ENSPLOG00000015318) #27	SRPK3 (ENSPLOG00000014529) #28	IDH3G (ENSPLOG00000014245) #29	SSR4 (ENSPLOG00000014154) #30	PDZD4 (ENSPLOG00000013907) #31	L1CAM (ENSPLOG00000013396) #32	AVPR2 (ENSPLOG00000013280) #34	ARHGAP4 (ENSPLOG00000012775) #35	NAA10 (ENSPLOG00000012684) #36	RENBP (ENSPLOG00000012442) #37	HCFC1 (ENSPLOG00000011916)
leopard	MODERN SPECIES	214									ENSPPRG00000013055	ENSPPRG00000013646	TREX2 (ENSPPRG00000017457) #17	HAUS7 (ENSPPRG00000014451) #18	BGN (ENSPPRG00000014620) #19	ATP2B3 (ENSPPRG00000024167) #20	CCNQ (ENSPPRG00000024044) #21	DUSP9 (ENSPPRG00000023875) #22	ENSPPRG00000000433 #23	PNCK (ENSPPRG00000002563) #23	ENSPPRG00000002840 #24	BCAP31 (ENSPPRG00000003191) #25	ABCD1 (ENSPPRG00000003214) #26	SRPK3 (ENSPPRG00000006472) #28	IDH3G (ENSPPRG00000007090) #29	SSR4 (ENSPPRG00000007302) #30	PDZD4 (ENSPPRG00000007757) #31	L1CAM (ENSPPRG00000010911) #32	ENSPPRG00000011145	AVPR2 (ENSPPRG00000011559) #34	ARHGAP4 (ENSPPRG00000019046) #35	NAA10 (ENSPPRG00000021297) #36	RENBP (ENSPPRG00000000874) #37
Cat	MODERN SPECIES	252	GABRA3 (ENSFCAG00000018801)	GABRQ (ENSFCAG00000003846) #12	ENSFCAG00000052762	CETN2 (ENSFCAG00000004901) #13	NSDHL (ENSFCAG00000004907) #14	ZNF185 (ENSFCAG00000004911)	ENSFCAG00000052684	PNMA3 (ENSFCAG00000003125)	ENSFCAG00000041838	ENSFCAG00000052212	ENSFCAG00000004665 #15	TREX2 (ENSFCAG00000018938) #17	HAUS7 (ENSFCAG00000004027) #18	ATP2B3 (ENSFCAG00000004031) #20	CCNQ (ENSFCAG00000004033) #21	DUSP9 (ENSFCAG00000004034) #22	PNCK (ENSFCAG00000004035) #23	ENSFCAG00000004036 #24	BCAP31 (ENSFCAG00000004037) #25	ABCD1 (ENSFCAG00000004038) #26	PLXNB3 (ENSFCAG00000004039) #27	SRPK3 (ENSFCAG00000043991) #28	IDH3G (ENSFCAG00000033410) #29	SSR4 (ENSFCAG00000004040) #30	ARHGAP4 (ENSFCAG00000011385) #35	L1CAM (ENSFCAG00000008614) #32	AVPR2 (ENSFCAG00000011384) #34	NAA10 (ENSFCAG00000028705) #36	RENBP (ENSFCAG00000018690) #37	HCFC1 (ENSFCAG00000011387)	TMEM187 (ENSFCAG00000011388)
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Equus	ANCESTRAL SPECIES	52	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.hb.b	ENSGT00390000001700.a.b.b	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.ib	ENSGT00940000162887 #16	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Horse	MODERN SPECIES	480	ZNF185 (ENSECAG00000010142)	PNMA5 (ENSECAG00000000960)	ENSECAG00000031829	PNMA3 (ENSECAG00000000991)	ENSECAG00000035483	ENSECAG00000056746	ENSECAG00000030904	ENSECAG00000028315	ENSECAG00000014611 #15	ZFP92 (ENSECAG00000015856) #16	HAUS7 (ENSECAG00000016027) #18	ECMX (ENSECAG00000018701)	BGN (ENSECAG00000018717) #19	ATP2B3 (ENSECAG00000023490) #20	CCNQ (ENSECAG00000026922) #21	DUSP9 (ENSECAG00000013650) #22	PNCK (ENSECAG00000036146) #23	SLC6A8 (ENSECAG00000013965) #24	BCAP31 (ENSECAG00000022787) #25	ABCD1 (ENSECAG00000022935) #26	PLXNB3 (ENSECAG00000000639) #27	SRPK3 (ENSECAG00000058187) #28	IDH3G (ENSECAG00000018509) #29	SSR4 (ENSECAG00000023150) #30	PDZD4 (ENSECAG00000024310) #31	L1CAM (ENSECAG00000002810) #32	AVPR2 (ENSECAG00000022974) #34	ARHGAP4 (ENSECAG00000023201) #35	NAA10 (ENSECAG00000015203) #36	RENBP (ENSECAG00000018888) #37	HCFC1 (ENSECAG00000022440)
Donkey	MODERN SPECIES	36	ENSEASG00005025853	ENSEASG00005023777	ENSEASG00005028277	ENSEASG00005019400	ENSEASG00005031334	ENSEASG00005033113	ENSEASG00005026052	ENSEASG00005035618	ENSEASG00005023652 #15	ENSEASG00005036517 #16	TREX2 (ENSEASG00005019558) #17	HAUS7 (ENSEASG00005019556) #18	BGN (ENSEASG00005035268) #19	ATP2B3 (ENSEASG00005019538) #20	CCNQ (ENSEASG00005019537) #21	DUSP9 (ENSEASG00005019536) #22	PNCK (ENSEASG00005019534) #23	ENSEASG00005019533 #24	BCAP31 (ENSEASG00005019531) #25	ABCD1 (ENSEASG00005019529) #26	PLXNB3 (ENSEASG00005019471) #27	SRPK3 (ENSEASG00005019451) #28	IDH3G (ENSEASG00005019382) #29	SSR4 (ENSEASG00005019363) #30	PDZD4 (ENSEASG00005028120) #31	L1CAM (ENSEASG00005019353) #32	AVPR2 (ENSEASG00005027808) #34	ARHGAP4 (ENSEASG00005019296) #35	NAA10 (ENSEASG00005030165) #36	RENBP (ENSEASG00005019286) #37	HCFC1 (ENSEASG00005019244)
Chiroptera	ANCESTRAL SPECIES	48	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00910000144363	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37
Megabat	MODERN SPECIES	4214																DUSP9 (ENSPVAG00000012345) #22
Microchiroptera	ANCESTRAL SPECIES	45	ENSGT00940000159444	ENSGT00940000162167 #12	ENSGT00910000144363	ENSGT00940000155935 #13	ENSGT00940000158229 #14	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000161383
Greater horseshoe bat	MODERN SPECIES		ENSRFEG00010006156	CETN2 (ENSRFEG00010006124) #13	NSDHL (ENSRFEG00010006063) #14	ZNF185 (ENSRFEG00010005969)	PNMA3 (ENSRFEG00010005848)	ENSRFEG00010005818	ENSRFEG00010005799	ENSRFEG00010005753	ENSRFEG00010005702 #15	ENSRFEG00010005686	ENSRFEG00010005660	HAUS7 (ENSRFEG00010005503) #18	BGN (ENSRFEG00010005401) #19	ATP2B3 (ENSRFEG00010005284) #20	CCNQ (ENSRFEG00010005249) #21	DUSP9 (ENSRFEG00010005234) #22	PNCK (ENSRFEG00010005195) #23	ENSRFEG00010005165 #24	BCAP31 (ENSRFEG00010005136) #25	ABCD1 (ENSRFEG00010005067) #26	PLXNB3 (ENSRFEG00010005005) #27	SRPK3 (ENSRFEG00010004974) #28	IDH3G (ENSRFEG00010004950) #29	SSR4 (ENSRFEG00010004934) #30	PDZD4 (ENSRFEG00010004912) #31	L1CAM (ENSRFEG00010004838) #32	ENSRFEG00010004798	AVPR2 (ENSRFEG00010004785) #34	ARHGAP4 (ENSRFEG00010004760) #35	ARD1A (ENSRFEG00010004730) #36	RENBP (ENSRFEG00010004689) #37
Microbat	MODERN SPECIES	977	ENSMLUG00000014520 #13	NSDHL (ENSMLUG00000014525) #14	ZNF185 (ENSMLUG00000015980)	ENSMLUG00000022293	ENSMLUG00000025329	ENSMLUG00000023246	ENSMLUG00000025774	ENSMLUG00000006827	ENSMLUG00000028854	TREX2 (ENSMLUG00000027143) #17	ENSMLUG00000010516 #18	ENSMLUG00000025983	ENSMLUG00000010569 #19	ATP2B3 (ENSMLUG00000010583) #20	CCNQ (ENSMLUG00000012844) #21	DUSP9 (ENSMLUG00000008666) #22	PNCK (ENSMLUG00000008649) #23	ENSMLUG00000004391 #24	BCAP31 (ENSMLUG00000004416) #25	ABCD1 (ENSMLUG00000004423) #26	PLXNB3 (ENSMLUG00000004428) #27	SRPK3 (ENSMLUG00000004445) #28	ENSMLUG00000004457 #29	SSR4 (ENSMLUG00000004462) #30	PDZD4 (ENSMLUG00000004464) #31	L1CAM (ENSMLUG00000014234) #32	AVPR2 (ENSMLUG00000014253) #34	ARHGAP4 (ENSMLUG00000014257) #35	NAA10 (ENSMLUG00000014267) #36	RENBP (ENSMLUG00000014271) #37	HCFC1 (ENSMLUG00000014275)
Atlantogenata	ANCESTRAL SPECIES	70		ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000154411.`b.i.f	ENSGT01100000263534.b.k.a.b.b	ENSGT01100000263507.D.a.a.b.a	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000164248	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000166196
Afrotheria	ANCESTRAL SPECIES	82								ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000166196
Afrotheria_a	ANCESTRAL SPECIES	81								ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #16	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000012715.a #17	ENSGT00390000003937 #18	ENSGT00940000155311.C #19	ENSGT00940000160765 #20	ENSGT00940000155445 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #35	ENSGT00550000074803 #36	ENSGT00390000013740 #37	ENSGT00940000166196
Elephant	MODERN SPECIES	50								ENSLAFG00000027476	ENSLAFG00000026228	ENSLAFG00000022395	TREX2 (ENSLAFG00000025805) #17	BGN (ENSLAFG00000002207) #19	ATP2B3 (ENSLAFG00000002208) #20	CCNQ (ENSLAFG00000029369) #21	HAUS7 (ENSLAFG00000005743) #18	DUSP9 (ENSLAFG00000031085) #22	PNCK (ENSLAFG00000013695) #23	ENSLAFG00000012168 #24	BCAP31 (ENSLAFG00000022717) #25	ABCD1 (ENSLAFG00000027794) #26	PLXNB3 (ENSLAFG00000002638) #27	SRPK3 (ENSLAFG00000006899) #28	IDH3G (ENSLAFG00000006904) #29	SSR4 (ENSLAFG00000006908) #30	PDZD4 (ENSLAFG00000025865) #31	L1CAM (ENSLAFG00000021925) #32	AVPR2 (ENSLAFG00000027738) #34	ARHGAP4 (ENSLAFG00000014809) #35	NAA10 (ENSLAFG00000007025) #36	RENBP (ENSLAFG00000007027) #37	ENSLAFG00000028984
Tenrec	MODERN SPECIES	9696																ENSETEG00000008182 #22