Sarcopterygii	ANCESTRAL SPECIES	265							ENSGT00940000161969	ENSGT00940000154471.a.a	ENSGT00940000164911	ENSGT00390000013740 #36	ENSGT00950000182846.a.b	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937 #19	ENSGT00940000153588.b	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a
Tetrapoda	ANCESTRAL SPECIES	86	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00390000016224	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00950000182846.a.b	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937 #19	ENSGT00390000012715 #18	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162980	ENSGT00390000003348	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000155170
Amniota	ANCESTRAL SPECIES	40	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00390000003348	ENSGT00940000162980	ENSGT00940000164454	ENSGT00950000182835.c.c	ENSGT00530000063540.a	ENSGT00940000159912	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000166196
Mammalia	ANCESTRAL SPECIES	46	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000162980	ENSGT00940000164454	ENSGT00950000182835.c.c	ENSGT00530000063540.a	ENSGT00940000159912	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000183006.A.a.b	ENSGT00950000182824.a.b.b #33	ENSGT00390000016224.j.a	ENSGT00550000074803 #35
Theria	ANCESTRAL SPECIES	46										ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00390000016224.j.a	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Eutheria	ANCESTRAL SPECIES	16										ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000166196
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b #15	ENSGT00390000000062.x.b #13	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b #15	ENSGT00390000000062.x.b #13	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Glires	ANCESTRAL SPECIES	10	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Rodentia	ANCESTRAL SPECIES	10	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000154972 #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Muroidea	ANCESTRAL SPECIES	13	ENSGT00940000154972.eb.a #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000154972.eb.a #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Murinae	ANCESTRAL SPECIES	14	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a ##13	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Mus	ANCESTRAL SPECIES	9	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a ##13	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Shrew mouse	MODERN SPECIES	23	Magea10 (MGP_PahariEiJ_G0031681) #7	Gabra3 (MGP_PahariEiJ_G0031682) #8	Gabrq (MGP_PahariEiJ_G0031683) #9	Cetn2 (MGP_PahariEiJ_G0031684) #10	Nsdhl (MGP_PahariEiJ_G0031685) #11	Zfp185 (MGP_PahariEiJ_G0031686) #12	MGP_PahariEiJ_G0031687 #13	MGP_PahariEiJ_G0031688 #14	MGP_PahariEiJ_G0031689 #15	Zfp275 (MGP_PahariEiJ_G0031690) #16	MGP_PahariEiJ_G0031691 #17	Trex2 (MGP_PahariEiJ_G0031692) #18	Haus7 (MGP_PahariEiJ_G0031693) #19	Bgn (MGP_PahariEiJ_G0031694) #20	Atp2b3 (MGP_PahariEiJ_G0031695) #21	Dusp9 (MGP_PahariEiJ_G0031696) #22	Pnck (MGP_PahariEiJ_G0031697) #23	Slc6a8 (MGP_PahariEiJ_G0031698) #24	Bcap31 (MGP_PahariEiJ_G0031699) #25	Abcd1 (MGP_PahariEiJ_G0031700) #26	Plxnb3 (MGP_PahariEiJ_G0031701) #27	Srpk3 (MGP_PahariEiJ_G0031702) #28	Idh3g (MGP_PahariEiJ_G0031703) #29	Ssr4 (MGP_PahariEiJ_G0031704) #30	Pdzd4 (MGP_PahariEiJ_G0031705) #31	L1cam (MGP_PahariEiJ_G0031706) #32	Arhgap4 (MGP_PahariEiJ_G0031707) #33	Avpr2 (MGP_PahariEiJ_G0031708) #34	Naa10 (MGP_PahariEiJ_G0031709) #35	Renbp (MGP_PahariEiJ_G0031710) #36	Hcfc1 (MGP_PahariEiJ_G0031711) #37
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a ##13	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Mus_B	ANCESTRAL SPECIES	14	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a ##13	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000154972.eb.a #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
spretus	MODERN SPECIES	19	Magea10 (MGP_SPRETEiJ_G0034293) #7	Gabra3 (MGP_SPRETEiJ_G0034294) #8	Gabrq (MGP_SPRETEiJ_G0034295) #9	Cetn2 (MGP_SPRETEiJ_G0034296) #10	Nsdhl (MGP_SPRETEiJ_G0034297) #11	Zfp185 (MGP_SPRETEiJ_G0034298) #12	Pnma5 (MGP_SPRETEiJ_G0034299)	Pnma3 (MGP_SPRETEiJ_G0034300)	F8a (MGP_SPRETEiJ_G0034301)	Zfp275 (MGP_SPRETEiJ_G0034302) #16	Zfp92 (MGP_SPRETEiJ_G0034303) #17	Trex2 (MGP_SPRETEiJ_G0034304) #18	Haus7 (MGP_SPRETEiJ_G0034305) #19	Bgn (MGP_SPRETEiJ_G0034306) #20	Atp2b3 (MGP_SPRETEiJ_G0034307) #21	Dusp9 (MGP_SPRETEiJ_G0034308) #22	Pnck (MGP_SPRETEiJ_G0034309) #23	Slc6a8 (MGP_SPRETEiJ_G0034310) #24	Bcap31 (MGP_SPRETEiJ_G0034311) #25	Abcd1 (MGP_SPRETEiJ_G0034312) #26	Plxnb3 (MGP_SPRETEiJ_G0034313) #27	Srpk3 (MGP_SPRETEiJ_G0034314) #28	Idh3g (MGP_SPRETEiJ_G0034315) #29	Ssr4 (MGP_SPRETEiJ_G0034316) #30	Pdzd4 (MGP_SPRETEiJ_G0034317) #31	L1cam (MGP_SPRETEiJ_G0034318) #32	Arhgap4 (MGP_SPRETEiJ_G0034319) #33	Avpr2 (MGP_SPRETEiJ_G0034320) #34	Naa10 (MGP_SPRETEiJ_G0034321) #35	Renbp (MGP_SPRETEiJ_G0034322) #36	Hcfc1 (MGP_SPRETEiJ_G0034323) #37
Steppe mouse	MODERN SPECIES	886																Dusp9 (ENSMSIG00000007104) #22
Mouse	MODERN SPECIES	37	Spin2d (ENSMUSG00000079566)	Xlr3b (ENSMUSG00000073125) ##13	Xlr4b (ENSMUSG00000067768) ##13	F8a (ENSMUSG00000078317)	Xlr4c (ENSMUSG00000031362) ##13	Xlr3c (ENSMUSG00000058147) ##13	Xlr5c (ENSMUSG00000067764) #13	Gm45015 (ENSMUSG00000109368)	Zfp275 (ENSMUSG00000031365) #16	Gm18336 (ENSMUSG00000096966)	Zfp92 (ENSMUSG00000031374) #17	Trex2 (ENSMUSG00000031372) #18	Haus7 (ENSMUSG00000031371) #19	Bgn (ENSMUSG00000031375) #20	Atp2b3 (ENSMUSG00000031376) #21	Dusp9 (ENSMUSG00000031383) #22	Pnck (ENSMUSG00000002012) #23	Slc6a8 (ENSMUSG00000019558) #24	Bcap31 (ENSMUSG00000002015) #25	Abcd1 (ENSMUSG00000031378) #26	Plxnb3 (ENSMUSG00000031385) #27	Srpk3 (ENSMUSG00000002007) #28	Idh3g (ENSMUSG00000002010) #29	Ssr4 (ENSMUSG00000002014) #30	Pdzd4 (ENSMUSG00000002006) #31	L1cam (ENSMUSG00000031391) #32	Arhgap4 (ENSMUSG00000031389) #33	Avpr2 (ENSMUSG00000031390) #34	Naa10 (ENSMUSG00000031388) #35	Renbp (ENSMUSG00000031387) #36	Hcfc1 (ENSMUSG00000031386) #37
Ryukyu mouse	MODERN SPECIES	19	Magea4 (MGP_CAROLIEiJ_G0033138) ##7	Gabre (MGP_CAROLIEiJ_G0033139)	Magea10 (MGP_CAROLIEiJ_G0033140) #7	Gabra3 (MGP_CAROLIEiJ_G0033141) #8	Gabrq (MGP_CAROLIEiJ_G0033142) #9	Cetn2 (MGP_CAROLIEiJ_G0033143) #10	Nsdhl (MGP_CAROLIEiJ_G0033144) #11	Zfp185 (MGP_CAROLIEiJ_G0033145) #12	Pnma5 (MGP_CAROLIEiJ_G0033146)	Zfp275 (MGP_CAROLIEiJ_G0033147) #16	Zfp92 (MGP_CAROLIEiJ_G0033148) #17	Trex2 (MGP_CAROLIEiJ_G0033149) #18	Haus7 (MGP_CAROLIEiJ_G0033150) #19	Bgn (MGP_CAROLIEiJ_G0033151) #20	Atp2b3 (MGP_CAROLIEiJ_G0033152) #21	Dusp9 (MGP_CAROLIEiJ_G0033153) #22	Pnck (MGP_CAROLIEiJ_G0033154) #23	Slc6a8 (MGP_CAROLIEiJ_G0033155) #24	Bcap31 (MGP_CAROLIEiJ_G0033156) #25	Abcd1 (MGP_CAROLIEiJ_G0033157) #26	Plxnb3 (MGP_CAROLIEiJ_G0033158) #27	Srpk3 (MGP_CAROLIEiJ_G0033159) #28	Idh3g (MGP_CAROLIEiJ_G0033160) #29	Ssr4 (MGP_CAROLIEiJ_G0033161) #30	Pdzd4 (MGP_CAROLIEiJ_G0033162) #31	L1cam (MGP_CAROLIEiJ_G0033163) #32	Arhgap4 (MGP_CAROLIEiJ_G0033164) #33	Avpr2 (MGP_CAROLIEiJ_G0033165) #34	Naa10 (MGP_CAROLIEiJ_G0033166) #35	Renbp (MGP_CAROLIEiJ_G0033167) #36	Hcfc1 (MGP_CAROLIEiJ_G0033168) #37
Rat	MODERN SPECIES	46	F8a1 (ENSRNOG00000070033)	LOC103690322 (ENSRNOG00000055822) ##13	LOC100911047 (ENSRNOG00000068104) ##13	Xlr3a (ENSRNOG00000064693) ##13	LOC100911002 (ENSRNOG00000050177) #13	Pwwp4 (ENSRNOG00000068777) #15	ENSRNOG00000069789	Zfp275 (ENSRNOG00000061073) #16	RGD1559982 (ENSRNOG00000070467)	Zfp92 (ENSRNOG00000051836) #17	Trex2 (ENSRNOG00000056983) #18	Haus7 (ENSRNOG00000055648) #19	Bgn (ENSRNOG00000055962) #20	Atp2b3 (ENSRNOG00000061304) #21	AABR07071935.1 (ENSRNOG00000061441)	Dusp9 (ENSRNOG00000055185) #22	Pnck (ENSRNOG00000058317) #23	Slc6a8 (ENSRNOG00000057620) #24	Bcap31 (ENSRNOG00000055756) #25	Abcd1 (ENSRNOG00000056524) #26	Plxnb3 (ENSRNOG00000061731) #27	Srpk3 (ENSRNOG00000054548) #28	Idh3g (ENSRNOG00000055572) #29	Ssr4 (ENSRNOG00000053172) #30	Pdzd4 (ENSRNOG00000056174) #31	L1cam (ENSRNOG00000061230) #32	Arhgap4 (ENSRNOG00000058545) #33	Avpr2 (ENSRNOG00000059862) #34	Naa10 (ENSRNOG00000060063) #35	Renbp (ENSRNOG00000054765) #36	Hcfc1 (ENSRNOG00000051948) #37
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00390000006832	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000154972.eb.a #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Cricetinae	ANCESTRAL SPECIES	46						ENSGT00390000000062.x.b.k.b ##13	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00940000161383 #37	ENSGT00940000160502
Golden Hamster	MODERN SPECIES	857									ENSMAUG00000019268	Gm18336 (ENSMAUG00000017654)	Zfp92 (ENSMAUG00000006204) #17	Trex2 (ENSMAUG00000006617) #18	Haus7 (ENSMAUG00000020073) #19	Bgn (ENSMAUG00000020050) #20	Atp2b3 (ENSMAUG00000009992) #21	Dusp9 (ENSMAUG00000020993) #22	Pnck (ENSMAUG00000017486) #23	Slc6a8 (ENSMAUG00000017007) #24	Bcap31 (ENSMAUG00000009135) #25	Abcd1 (ENSMAUG00000020103) #26	Plxnb3 (ENSMAUG00000005458) #27	Srpk3 (ENSMAUG00000009935) #28	Idh3g (ENSMAUG00000000657) #29	ENSMAUG00000015090 #30	Pdzd4 (ENSMAUG00000000466) #31	L1cam (ENSMAUG00000008575) #32	Avpr2 (ENSMAUG00000001098) #34	Arhgap4 (ENSMAUG00000020011) #33	Naa10 (ENSMAUG00000019021) #35	Hcfc1 (ENSMAUG00000018495) #37	Irak1 (ENSMAUG00000002430)
Chinese hamster chok1gshd	MODERN SPECIES	16	Nsdhl (ENSCGRG00001015462) #11	Zfp185 (ENSCGRG00001021834) #12	ENSCGRG00001024731 ##13	ENSCGRG00001005230 #15	ENSCGRG00001023020 ##13	F8a (ENSCGRG00001010823)	ENSCGRG00001011071	Gm45015 (ENSCGRG00001000704)	ENSCGRG00001020684	Gm18336 (ENSCGRG00001009753)	Zfp92 (ENSCGRG00001024615) #17	Trex2 (ENSCGRG00001012110) #18	Haus7 (ENSCGRG00001014259) #19	Bgn (ENSCGRG00001004273) #20	Atp2b3 (ENSCGRG00001013946) #21	Dusp9 (ENSCGRG00001015656) #22	Pnck (ENSCGRG00001015654) #23	Slc6a8 (ENSCGRG00001013941) #24	ENSCGRG00001022627 #25	Abcd1 (ENSCGRG00001017773) #26	Plxnb3 (ENSCGRG00001024658) #27	Srpk3 (ENSCGRG00001005920) #28	Idh3g (ENSCGRG00001012756) #29	Ssr4 (ENSCGRG00001019369) #30	Pdzd4 (ENSCGRG00001012732) #31	L1cam (ENSCGRG00001020541) #32	Avpr2 (ENSCGRG00001010799) #34	Arhgap4 (ENSCGRG00001023232) #33	Naa10 (ENSCGRG00001012595) #35	Hcfc1 (ENSCGRG00001019535) #37	Irak1 (ENSCGRG00001013928)
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00940000161201	ENSGT00940000154972.eb.a #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v.i #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Prairie vole	MODERN SPECIES	212									ENSMOCG00000008885	Gm18336 (ENSMOCG00000000683)	Zfp92 (ENSMOCG00000015417) #17	Trex2 (ENSMOCG00000001305) #18	ENSMOCG00000016829 #19	Bgn (ENSMOCG00000005439) #20	Atp2b3 (ENSMOCG00000016837) #21	Dusp9 (ENSMOCG00000014149) #22	Pnck (ENSMOCG00000005305) #23	Slc6a8 (ENSMOCG00000013922) #24	Bcap31 (ENSMOCG00000011355) #25	Abcd1 (ENSMOCG00000020381) #26	Plxnb3 (ENSMOCG00000016754) #27	Srpk3 (ENSMOCG00000000270) #28	Idh3g (ENSMOCG00000013265) #29	Ssr4 (ENSMOCG00000000481) #30	Pdzd4 (ENSMOCG00000013342) #31	L1cam (ENSMOCG00000018901) #32	Avpr2 (ENSMOCG00000012257) #34	Arhgap4 (ENSMOCG00000010795) #33	Naa10 (ENSMOCG00000011968) #35	Renbp (ENSMOCG00000021137) #36	Hcfc1 (ENSMOCG00000018390) #37
Northern American deer mouse	MODERN SPECIES	475	Gabrq (ENSPEMG00000024127) #9	Cetn2 (ENSPEMG00000009693) #10	Nsdhl (ENSPEMG00000028251) #11	ENSPEMG00000016866	Zfp185 (ENSPEMG00000001172) #12	Pnma5 (ENSPEMG00000029060)	ENSPEMG00000029415	ENSPEMG00000014112	Zfp275 (ENSPEMG00000028598) #16	ENSPEMG00000002119	Zfp92 (ENSPEMG00000029357) #17	Trex2 (ENSPEMG00000004918) #18	Haus7 (ENSPEMG00000011467) #19	Bgn (ENSPEMG00000017164) #20	Atp2b3 (ENSPEMG00000001607) #21	Dusp9 (ENSPEMG00000009249) #22	Pnck (ENSPEMG00000018929) #23	ENSPEMG00000001387 #24	Bcap31 (ENSPEMG00000018100) #25	Abcd1 (ENSPEMG00000010748) #26	Plxnb3 (ENSPEMG00000019022) #27	Srpk3 (ENSPEMG00000012149) #28	Idh3g (ENSPEMG00000011232) #29	Ssr4 (ENSPEMG00000008760) #30	Pdzd4 (ENSPEMG00000008494) #31	L1cam (ENSPEMG00000011592) #32	Avpr2 (ENSPEMG00000008325) #34	Arhgap4 (ENSPEMG00000019112) #33	ENSPEMG00000010870 #36	Hcfc1 (ENSPEMG00000011837) #37	Irak1 (ENSPEMG00000001469)
Upper Galilee mountains blind mole rat	MODERN SPECIES	660	Magea10 (ENSNGAG00000018067) #7	Gabra3 (ENSNGAG00000004762) #8	Gabrq (ENSNGAG00000023448) #9	Cetn2 (ENSNGAG00000013931) #10	Nsdhl (ENSNGAG00000013199) #11	Zfp185 (ENSNGAG00000007010) #12	Pnma3 (ENSNGAG00000021577)	Zfp275 (ENSNGAG00000023803) #16	Gm18336 (ENSNGAG00000010715)	Zfp92 (ENSNGAG00000014044) #17	Trex2 (ENSNGAG00000022556) #18	Haus7 (ENSNGAG00000004509) #19	Bgn (ENSNGAG00000020236) #20	Atp2b3 (ENSNGAG00000023103) #21	ENSNGAG00000022572	Dusp9 (ENSNGAG00000022463) #22	Pnck (ENSNGAG00000024203) #23	Slc6a8 (ENSNGAG00000012992) #24	Bcap31 (ENSNGAG00000005195) #25	Abcd1 (ENSNGAG00000023420) #26	Plxnb3 (ENSNGAG00000023368) #27	Srpk3 (ENSNGAG00000021121) #28	Idh3g (ENSNGAG00000017889) #29	ENSNGAG00000015787 #30	Pdzd4 (ENSNGAG00000009443) #31	L1cam (ENSNGAG00000013550) #32	Avpr2 (ENSNGAG00000009849) #34	Arhgap4 (ENSNGAG00000015413) #33	Naa10 (ENSNGAG00000020303) #35	Renbp (ENSNGAG00000021686) #36	Hcfc1 (ENSNGAG00000013083) #37
Lesser Egyptian jerboa	MODERN SPECIES	224							Pnma5 (ENSJJAG00000022106)	ENSJJAG00000023268	Zfp275 (ENSJJAG00000023544) #16	ENSJJAG00000023776	Zfp92 (ENSJJAG00000024019) #17	Trex2 (ENSJJAG00000012484) #18	Haus7 (ENSJJAG00000011304) #19	Bgn (ENSJJAG00000014050) #20	Atp2b3 (ENSJJAG00000014975) #21	Dusp9 (ENSJJAG00000018570) #22	Pnck (ENSJJAG00000020546) #23	Slc6a8 (ENSJJAG00000022046) #24	Bcap31 (ENSJJAG00000011510) #25	Abcd1 (ENSJJAG00000012430) #26	Plxnb3 (ENSJJAG00000017006) #27	Srpk3 (ENSJJAG00000019785) #28	Idh3g (ENSJJAG00000015962) #29	Ssr4 (ENSJJAG00000017842) #30	Pdzd4 (ENSJJAG00000018534) #31	L1cam (ENSJJAG00000021077) #32	Avpr2 (ENSJJAG00000018314) #34	Arhgap4 (ENSJJAG00000021798) #33	Naa10 (ENSJJAG00000023398) #35	Renbp (ENSJJAG00000010739) #36	Hcfc1 (ENSJJAG00000012815) #37
Kangaroo rat	MODERN SPECIES	526									ENSDORG00000029018	Zfp92 (ENSDORG00000001936) #17	Trex2 (ENSDORG00000023727) #18	Haus7 (ENSDORG00000001235) #19	ENSDORG00000001237 #20	Atp2b3 (ENSDORG00000013038) #21	ENSDORG00000012846	Dusp9 (ENSDORG00000024222) #22	Pnck (ENSDORG00000014186) #23	Slc6a8 (ENSDORG00000001174) #24	Bcap31 (ENSDORG00000006022) #25	Abcd1 (ENSDORG00000006023) #26	Plxnb3 (ENSDORG00000006024) #27	Srpk3 (ENSDORG00000006026) #28	Idh3g (ENSDORG00000006029) #29	Ssr4 (ENSDORG00000006030) #30	Pdzd4 (ENSDORG00000028112) #31	L1cam (ENSDORG00000014093) #32	Avpr2 (ENSDORG00000002747) #34	Arhgap4 (ENSDORG00000002750) #33	Naa10 (ENSDORG00000002753) #35	Renbp (ENSDORG00000002755) #36	Hcfc1 (ENSDORG00000002756) #37
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935.eb.a #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT00940000161201	ENSGT00940000154972 #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935.eb.a #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Hystricomorpha_b	ANCESTRAL SPECIES	84	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000154972 #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935.eb.a #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Degu	MODERN SPECIES	259		ENSODEG00000002731	ENSODEG00000002721	CCSER1 (ENSODEG00000002701)	ENSODEG00000003691	GABRQ (ENSODEG00000003646) #9	ENSODEG00000003612 #10	NSDHL (ENSODEG00000003563) #11	ENSODEG00000003535	ZFP92 (ENSODEG00000003508) #17	TREX2 (ENSODEG00000019142) #18	HAUS7 (ENSODEG00000003475) #19	BGN (ENSODEG00000003451) #20	ATP2B3 (ENSODEG00000003358) #21	CCNQ (ENSODEG00000003285)	DUSP9 (ENSODEG00000003261) #22	PNCK (ENSODEG00000003252) #23	ENSODEG00000003207 #24	BCAP31 (ENSODEG00000003174) #25	ABCD1 (ENSODEG00000003127) #26	PLXNB3 (ENSODEG00000002965) #27	SRPK3 (ENSODEG00000002869) #28	IDH3G (ENSODEG00000002774) #29	SSR4 (ENSODEG00000002732) #30	PDZD4 (ENSODEG00000005482) #31	L1CAM (ENSODEG00000005259) #32	ENSODEG00000005204	AVPR2 (ENSODEG00000005166) #34	ARHGAP4 (ENSODEG00000005124) #33	ENSODEG00000005100 #35	RENBP (ENSODEG00000005065) #36
Long-tailed chinchilla	MODERN SPECIES	287									ENSCLAG00000002477	ZFP92 (ENSCLAG00000002658) #17	TREX2 (ENSCLAG00000002698) #18	HAUS7 (ENSCLAG00000002789) #19	BGN (ENSCLAG00000003040) #20	ATP2B3 (ENSCLAG00000006386) #21	CCNQ (ENSCLAG00000008202)	DUSP9 (ENSCLAG00000008316) #22	PNCK (ENSCLAG00000002167) #23	ENSCLAG00000002550 #24	BCAP31 (ENSCLAG00000002843) #25	ABCD1 (ENSCLAG00000001650) #26	PLXNB3 (ENSCLAG00000001828) #27	SRPK3 (ENSCLAG00000001932) #28	IDH3G (ENSCLAG00000002456) #29	SSR4 (ENSCLAG00000002670) #30	PDZD4 (ENSCLAG00000002707) #31	L1CAM (ENSCLAG00000001453) #32	AVPR2 (ENSCLAG00000002650) #34	ENSCLAG00000001334 #33	NAA10 (ENSCLAG00000001427) #35	RENBP (ENSCLAG00000003810) #36	HCFC1 (ENSCLAG00000004175) #37
Guinea pig	MODERN SPECIES	148							ENSCPOG00000037160	ENSCPOG00000011291	ENSCPOG00000020829	ZFP92 (ENSCPOG00000006654) #17	TREX2 (ENSCPOG00000025702) #18	HAUS7 (ENSCPOG00000007497) #19	BGN (ENSCPOG00000023628) #20	ATP2B3 (ENSCPOG00000005102) #21	CCNQ (ENSCPOG00000009250)	DUSP9 (ENSCPOG00000000114) #22	ENSCPOG00000011710 #24	BCAP31 (ENSCPOG00000008510) #25	ABCD1 (ENSCPOG00000011702) #26	PLXNB3 (ENSCPOG00000006868) #27	SRPK3 (ENSCPOG00000006881) #28	IDH3G (ENSCPOG00000006890) #29	SSR4 (ENSCPOG00000006898) #30	PDZD4 (ENSCPOG00000019482) #31	L1CAM (ENSCPOG00000005519) #32	AVPR2 (ENSCPOG00000012697) #34	ENSCPOG00000026143 #33	NAA10 (ENSCPOG00000011495) #35	ENSCPOG00000024784 #36	IRAK1 (ENSCPOG00000039151)	MECP2 (ENSCPOG00000012579)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000033617	ENSHGLG00000045983 #7	ENSHGLG00000047243	ENSHGLG00000045027	ENSHGLG00000000219	ENSHGLG00000035866 #7	ENSHGLG00000032270	ENSHGLG00000046068	ENSHGLG00000045727	ENSHGLG00000035589 #17	TREX2 (ENSHGLG00000008010) #18	HAUS7 (ENSHGLG00000002908) #19	BGN (ENSHGLG00000004010) #20	ATP2B3 (ENSHGLG00000000642) #21	CCNQ (ENSHGLG00000003517)	DUSP9 (ENSHGLG00000004236) #22	PNCK (ENSHGLG00000006098) #23	ENSHGLG00000037294 #24	BCAP31 (ENSHGLG00000000710) #25	ABCD1 (ENSHGLG00000001000) #26	PLXNB3 (ENSHGLG00000002203) #27	IDH3G (ENSHGLG00000000443) #29	SSR4 (ENSHGLG00000001720) #30	PDZD4 (ENSHGLG00000001939) #31	L1CAM (ENSHGLG00000003403) #32	AVPR2 (ENSHGLG00000006784) #34	ARHGAP4 (ENSHGLG00000000857) #33	NAA10 (ENSHGLG00000002773) #35	RENBP (ENSHGLG00000009835) #36	HCFC1 (ENSHGLG00000001143) #37	IRAK1 (ENSHGLG00000002116)
Sciuridae	ANCESTRAL SPECIES	27	ENSGT00940000162167 #9	ENSGT00940000155935.cb #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Eurasian red squirrel	MODERN SPECIES	156	NSDHL (ENSSVLG00005022122) #11	ZNF185 (ENSSVLG00005022073) #12	PNMA5 (ENSSVLG00005022038)	ENSSVLG00005021967	PNMA3 (ENSSVLG00005021940)	ENSSVLG00005021915	ENSSVLG00005021891	ENSSVLG00005021871 #15	ENSSVLG00005021782 #16	ENSSVLG00005021735	ZFP92 (ENSSVLG00005021718) #17	HAUS7 (ENSSVLG00005021619) #19	BGN (ENSSVLG00005021572) #20	ATP2B3 (ENSSVLG00005020846) #21	CCNQ (ENSSVLG00005020662)	DUSP9 (ENSSVLG00005020621) #22	PNCK (ENSSVLG00005020384) #23	ENSSVLG00005020284 #24	BCAP31 (ENSSVLG00005020208) #25	ABCD1 (ENSSVLG00005020163) #26	ENSSVLG00005020066 #27	SRPK3 (ENSSVLG00005020004) #28	IDH3G (ENSSVLG00005019902) #29	SSR4 (ENSSVLG00005019816) #30	PDZD4 (ENSSVLG00005019686) #31	AVPR2 (ENSSVLG00005019578) #34	ENSSVLG00005019536	ARHGAP4 (ENSSVLG00005019458) #33	NAA10 (ENSSVLG00005019123) #35	RENBP (ENSSVLG00005019023) #36	HCFC1 (ENSSVLG00005018524) #37
Marmotini	ANCESTRAL SPECIES	83								ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Alpin marmot	MODERN SPECIES	541																ENSMMMG00000001424 #22
Marmotini_b	ANCESTRAL SPECIES	124								ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Arctic ground squirrel	MODERN SPECIES	562								ZNF275 (ENSUPAG00010012750)	ENSUPAG00010012742	ZFP92 (ENSUPAG00010012725) #17	TREX2 (ENSUPAG00010012721) #18	HAUS7 (ENSUPAG00010012697) #19	BGN (ENSUPAG00010012684) #20	ATP2B3 (ENSUPAG00010012590) #21	CCNQ (ENSUPAG00010012574)	DUSP9 (ENSUPAG00010012557) #22	PNCK (ENSUPAG00010012527) #23	ENSUPAG00010012523 #24	ABCD1 (ENSUPAG00010012506) #26	ENSUPAG00010012496	ENSUPAG00010012465 #27	SRPK3 (ENSUPAG00010012441) #28	IDH3G (ENSUPAG00010012400) #29	SSR4 (ENSUPAG00010012375) #30	PDZD4 (ENSUPAG00010012358) #31	L1CAM (ENSUPAG00010012204) #32	AVPR2 (ENSUPAG00010012191) #34	ARHGAP4 (ENSUPAG00010012018) #33	NAA10 (ENSUPAG00010011976) #35	RENBP (ENSUPAG00010011941) #36	HCFC1 (ENSUPAG00010011877) #37
Squirrel	MODERN SPECIES	409						ENSSTOG00000032558 #13	ZNF275 (ENSSTOG00000022633)	ENSSTOG00000033034	ENSSTOG00000029369	ZFP92 (ENSSTOG00000009126) #17	TREX2 (ENSSTOG00000027213) #18	HAUS7 (ENSSTOG00000022988) #19	BGN (ENSSTOG00000008058) #20	ATP2B3 (ENSSTOG00000008068) #21	CCNQ (ENSSTOG00000008103)	DUSP9 (ENSSTOG00000008115) #22	PNCK (ENSSTOG00000008119) #23	ENSSTOG00000026886 #24	BCAP31 (ENSSTOG00000008138) #25	ABCD1 (ENSSTOG00000008153) #26	ENSSTOG00000008188	PLXNB3 (ENSSTOG00000008197) #27	SRPK3 (ENSSTOG00000008233) #28	IDH3G (ENSSTOG00000008261) #29	SSR4 (ENSSTOG00000008278) #30	PDZD4 (ENSSTOG00000021423) #31	L1CAM (ENSSTOG00000008316) #32	AVPR2 (ENSSTOG00000008352) #34	ARHGAP4 (ENSSTOG00000022503) #33	NAA10 (ENSSTOG00000010237) #35	RENBP (ENSSTOG00000010247) #36
Lagomorpha	ANCESTRAL SPECIES	103											ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37	ENSGT00390000011272
Rabbit	MODERN SPECIES	549											TREX2 (ENSOCUG00000025054) #18	ENSOCUG00000002376 #19	BGN (ENSOCUG00000023931) #20	ATP2B3 (ENSOCUG00000029623) #21	CCNQ (ENSOCUG00000002393)	DUSP9 (ENSOCUG00000021158) #22	PNCK (ENSOCUG00000002399) #23	BCAP31 (ENSOCUG00000017921) #25	PLXNB3 (ENSOCUG00000016506) #27	ABCD1 (ENSOCUG00000017922) #26	IDH3G (ENSOCUG00000016554) #29	SSR4 (ENSOCUG00000027360) #30	ENSOCUG00000026260 #24	PDZD4 (ENSOCUG00000017200) #31	L1CAM (ENSOCUG00000001102) #32	AVPR2 (ENSOCUG00000015695) #34	ARHGAP4 (ENSOCUG00000001107) #33	NAA10 (ENSOCUG00000001111) #35	RENBP (ENSOCUG00000025840) #36	HCFC1 (ENSOCUG00000001113) #37	TMEM187 (ENSOCUG00000001116)
Pika	MODERN SPECIES	8486																DUSP9 (ENSOPRG00000012013) #22
Primates	ANCESTRAL SPECIES	23	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b #15	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Simiiformes	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Catarrhini	ANCESTRAL SPECIES	12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000164672	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00940000162921	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33
Gorilla	MODERN SPECIES	523	ZNF185 (ENSGGOG00000017066) #12	PNMA5 (ENSGGOG00000000643)	PNMA3 (ENSGGOG00000034909)	ENSGGOG00000043525	ENSGGOG00000036462	MAGEA1 (ENSGGOG00000010904)	PNMA6F (ENSGGOG00000039046)	ENSGGOG00000010898	ENSGGOG00000038628	ZFP92 (ENSGGOG00000039989) #17	TREX2 (ENSGGOG00000036312) #18	HAUS7 (ENSGGOG00000007959) #19	BGN (ENSGGOG00000007211) #20	ATP2B3 (ENSGGOG00000007217) #21	ENSGGOG00000027073	DUSP9 (ENSGGOG00000015273) #22	ENSGGOG00000039596	PNCK (ENSGGOG00000005546) #23	ENSGGOG00000041742 ##24	ENSGGOG00000005559 #25	ABCD1 (ENSGGOG00000005561) #26	PLXNB3 (ENSGGOG00000027723) #27	SRPK3 (ENSGGOG00000036424) #28	IDH3G (ENSGGOG00000023796) #29	SSR4 (ENSGGOG00000024329) #30	PDZD4 (ENSGGOG00000007937) #31	AVPR2 (ENSGGOG00000027387) #34	ARHGAP4 (ENSGGOG00000009770) #33	NAA10 (ENSGGOG00000009788) #35	RENBP (ENSGGOG00000009791) #36	HCFC1 (ENSGGOG00000009800) #37
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33
Human	MODERN SPECIES	1827	ZNF185 (ENSG00000147394) #12	PNMA5 (ENSG00000198883)	PNMA3 (ENSG00000183837)	PNMA6A (ENSG00000235961)	MAGEA1 (ENSG00000198681)	PWWP4 (ENSG00000278803) #15	PNMA6F (ENSG00000225110)	ZNF275 (ENSG00000063587)	PNMA6E (ENSG00000214897)	ZFP92 (ENSG00000189420) #17	TREX2 (ENSG00000183479) #18	HAUS7 (ENSG00000213397) #19	BGN (ENSG00000182492) #20	ATP2B3 (ENSG00000067842) #21	CCNQ (ENSG00000262919)	DUSP9 (ENSG00000130829) #22	PNCK (ENSG00000130822) #23	SLC6A8 (ENSG00000130821) #24	BCAP31 (ENSG00000185825) #25	ABCD1 (ENSG00000101986) #26	PLXNB3 (ENSG00000198753) #27	SRPK3 (ENSG00000184343) #28	IDH3G (ENSG00000067829) #29	SSR4 (ENSG00000180879) #30	PDZD4 (ENSG00000067840) #31	L1CAM (ENSG00000198910) #32	AVPR2 (ENSG00000126895) #34	ARHGAP4 (ENSG00000089820) #33	NAA10 (ENSG00000102030) #35	RENBP (ENSG00000102032) #36	HCFC1 (ENSG00000172534) #37
Pan	ANCESTRAL SPECIES	6	ENSGT00940000164672	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506 #32	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	259																ENSPTRG00000045215 #22	ENSPTRG00000048716	ENSPTRG00000047427 #23
Chimpanzee	MODERN SPECIES	972	ENSPTRG00000044072 #10	NSDHL (ENSPTRG00000022390) #11	ZNF185 (ENSPTRG00000022391) #12	PNMA5 (ENSPTRG00000028170)	PNMA3 (ENSPTRG00000029325)	ENSPTRG00000048952	ENSPTRG00000044850	MAGEA1 (ENSPTRG00000022386)	PNMA6F (ENSPTRG00000049868)	ZNF275 (ENSPTRG00000022394)	ZFP92 (ENSPTRG00000047228) #17	HAUS7 (ENSPTRG00000022397) #19	BGN (ENSPTRG00000022541) #20	ATP2B3 (ENSPTRG00000022399) #21	CCNQ (ENSPTRG00000043565)	ENSPTRG00000050474 #22	ENSPTRG00000043668	PNCK (ENSPTRG00000022404) #23	ENSPTRG00000050829 #24	BCAP31 (ENSPTRG00000046838) #25	ABCD1 (ENSPTRG00000051738) #26	PLXNB3 (ENSPTRG00000052414) #27	SRPK3 (ENSPTRG00000022410) #28	IDH3G (ENSPTRG00000024398) #29	SSR4 (ENSPTRG00000022412) #30	PDZD4 (ENSPTRG00000022413) #31	ENSPTRG00000045057	L1CAM (ENSPTRG00000022416) #32	ENSPTRG00000039921	AVPR2 (ENSPTRG00000033849) #34	ARHGAP4 (ENSPTRG00000033931) #33
Bonobo	MODERN SPECIES	369	MAGEA10 (ENSPPAG00000004915) #7	GABRA3 (ENSPPAG00000031555) #8	GABRQ (ENSPPAG00000032226) #9	CETN2 (ENSPPAG00000038780) #10	NSDHL (ENSPPAG00000039481) #11	ZNF185 (ENSPPAG00000039048) #12	PNMA5 (ENSPPAG00000009176)	PNMA3 (ENSPPAG00000033493)	ENSPPAG00000043033	ENSPPAG00000016764	ZFP92 (ENSPPAG00000027875) #17	HAUS7 (ENSPPAG00000034336) #19	BGN (ENSPPAG00000033259) #20	ATP2B3 (ENSPPAG00000028306) #21	ENSPPAG00000027886	DUSP9 (ENSPPAG00000043656) #22	ENSPPAG00000029417	PNCK (ENSPPAG00000030824) #23	SLC6A8 (ENSPPAG00000035106) #24	BCAP31 (ENSPPAG00000033741) #25	ABCD1 (ENSPPAG00000038979) #26	PLXNB3 (ENSPPAG00000029812) #27	SRPK3 (ENSPPAG00000030197) #28	IDH3G (ENSPPAG00000041999) #29	SSR4 (ENSPPAG00000041018) #30	PDZD4 (ENSPPAG00000038351) #31	ENSPPAG00000001011	L1CAM (ENSPPAG00000042079) #32	AVPR2 (ENSPPAG00000034862) #34	ARHGAP4 (ENSPPAG00000039545) #33	ENSPPAG00000037021 #35
Orangutan	MODERN SPECIES	242	CETN2 (ENSPPYG00000020833) #10	NSDHL (ENSPPYG00000020834) #11	ZNF185 (ENSPPYG00000029371) #12	PNMA5 (ENSPPYG00000032957)	PNMA3 (ENSPPYG00000020835)	PNMA6A (ENSPPYG00000020836)	MAGEA1 (ENSPPYG00000020837)	PNMA6F (ENSPPYG00000020840)	ZNF275 (ENSPPYG00000020839)	ENSPPYG00000033472	ENSPPYG00000020841 #17	HAUS7 (ENSPPYG00000020843) #19	BGN (ENSPPYG00000020844) #20	ATP2B3 (ENSPPYG00000020845) #21	CCNQ (ENSPPYG00000020846)	DUSP9 (ENSPPYG00000020847) #22	ENSPPYG00000031169	ENSPPYG00000020848 #23	SLC6A8 (ENSPPYG00000037616) #24	BCAP31 (ENSPPYG00000020850) #25	ABCD1 (ENSPPYG00000020852) #26	SRPK3 (ENSPPYG00000020854) #28	IDH3G (ENSPPYG00000020855) #29	SSR4 (ENSPPYG00000020856) #30	PDZD4 (ENSPPYG00000020857) #31	ENSPPYG00000031511	L1CAM (ENSPPYG00000020858) #32	ENSPPYG00000020859 #34	ARHGAP4 (ENSPPYG00000020860) #33	NAA10 (ENSPPYG00000020861) #35	RENBP (ENSPPYG00000020862) #36
Gibbon	MODERN SPECIES	449	ENSNLEG00000030965	ENSNLEG00000033117	CETN2 (ENSNLEG00000033913) #10	NSDHL (ENSNLEG00000013866) #11	ZNF185 (ENSNLEG00000013907) #12	PNMA3 (ENSNLEG00000018300)	ENSNLEG00000014065	ENSNLEG00000031614	ENSNLEG00000027745	ZFP92 (ENSNLEG00000013228) #17	ENSNLEG00000013237 #18	ENSNLEG00000031253 #19	BGN (ENSNLEG00000013250) #20	ATP2B3 (ENSNLEG00000032741) #21	CCNQ (ENSNLEG00000013298)	DUSP9 (ENSNLEG00000013321) #22	ENSNLEG00000027939	PNCK (ENSNLEG00000013336) #23	BCAP31 (ENSNLEG00000013380) #25	ABCD1 (ENSNLEG00000013458) #26	PLXNB3 (ENSNLEG00000013475) #27	ENSNLEG00000013518 #28	IDH3G (ENSNLEG00000013540) #29	SSR4 (ENSNLEG00000013602) #30	PDZD4 (ENSNLEG00000013626) #31	ENSNLEG00000034251	L1CAM (ENSNLEG00000013647) #32	ENSNLEG00000031864	AVPR2 (ENSNLEG00000013671) #34	ARHGAP4 (ENSNLEG00000013678) #33	NAA10 (ENSNLEG00000013724) #35
Cercopithecidae	ANCESTRAL SPECIES	19	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Rhinopithecus	ANCESTRAL SPECIES	195								ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Golden snub-nosed monkey	MODERN SPECIES	977									ENSRROG00000033043	ENSRROG00000028871	ZFP92 (ENSRROG00000031212) #17	HAUS7 (ENSRROG00000005507) #19	BGN (ENSRROG00000042294) #20	ATP2B3 (ENSRROG00000043666) #21	CCNQ (ENSRROG00000038429)	DUSP9 (ENSRROG00000037162) #22	ENSRROG00000039351	PNCK (ENSRROG00000044383) #23	SLC6A8 (ENSRROG00000045113) #24	BCAP31 (ENSRROG00000045725) #25	ABCD1 (ENSRROG00000037289) #26	PLXNB3 (ENSRROG00000039660) #27	SRPK3 (ENSRROG00000011319) #28	IDH3G (ENSRROG00000044366) #29	SSR4 (ENSRROG00000035638) #30	PDZD4 (ENSRROG00000042678) #31	L1CAM (ENSRROG00000041494) #32	AVPR2 (ENSRROG00000036522) #34	ARHGAP4 (ENSRROG00000045508) #33	NAA10 (ENSRROG00000041881) #35	RENBP (ENSRROG00000034139) #36
Black snub-nosed monkey	MODERN SPECIES	661								PNMA6F (ENSRBIG00000030196)	ENSRBIG00000041318	PNMA6E (ENSRBIG00000025010)	ZFP92 (ENSRBIG00000027712) #17	HAUS7 (ENSRBIG00000038209) #19	BGN (ENSRBIG00000043894) #20	ATP2B3 (ENSRBIG00000030237) #21	CCNQ (ENSRBIG00000034283)	DUSP9 (ENSRBIG00000031725) #22	ENSRBIG00000028856	PNCK (ENSRBIG00000039714) #23	SLC6A8 (ENSRBIG00000040899) #24	BCAP31 (ENSRBIG00000043421) #25	ABCD1 (ENSRBIG00000044662) #26	PLXNB3 (ENSRBIG00000026773) #27	IDH3G (ENSRBIG00000035445) #29	SSR4 (ENSRBIG00000015579) #30	PDZD4 (ENSRBIG00000029436) #31	L1CAM (ENSRBIG00000036638) #32	ENSRBIG00000032383 #34	ENSRBIG00000034619 #34	ARHGAP4 (ENSRBIG00000031629) #33	NAA10 (ENSRBIG00000040703) #35	RENBP (ENSRBIG00000020101) #36
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Pig-tailed macaque	MODERN SPECIES	390								PNMA6F (ENSMNEG00000031969)	ENSMNEG00000039113 #16	PNMA6E (ENSMNEG00000038171)	ZFP92 (ENSMNEG00000042434) #17	HAUS7 (ENSMNEG00000036428) #19	BGN (ENSMNEG00000042759) #20	ATP2B3 (ENSMNEG00000044784) #21	CCNQ (ENSMNEG00000042079)	DUSP9 (ENSMNEG00000040094) #22	ENSMNEG00000028994	PNCK (ENSMNEG00000040586) #23	SLC6A8 (ENSMNEG00000005457) #24	BCAP31 (ENSMNEG00000028474) #25	ABCD1 (ENSMNEG00000033571) #26	PLXNB3 (ENSMNEG00000032414) #27	SRPK3 (ENSMNEG00000030566) #28	IDH3G (ENSMNEG00000042620) #29	SSR4 (ENSMNEG00000042721) #30	PDZD4 (ENSMNEG00000041450) #31	L1CAM (ENSMNEG00000042796) #32	AVPR2 (ENSMNEG00000029040) #34	ARHGAP4 (ENSMNEG00000039860) #33	NAA10 (ENSMNEG00000034261) #35	RENBP (ENSMNEG00000038526) #36
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00940000164672.a.b	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37	ENSGT00390000011272
Rhesus	MODERN SPECIES	327	CETN2 (ENSMMUG00000020743) #10	NSDHL (ENSMMUG00000013176) #11	ZNF185 (ENSMMUG00000015264) #12	PNMA5 (ENSMMUG00000018469)	PNMA3 (ENSMMUG00000010897)	ENSMMUG00000063804 #15	ENSMMUG00000053273 #15	PNMA6F (ENSMMUG00000048764)	ENSMMUG00000013386 #16	PNMA6E (ENSMMUG00000045255)	ZFP92 (ENSMMUG00000057937) #17	HAUS7 (ENSMMUG00000012739) #19	BGN (ENSMMUG00000012743) #20	ATP2B3 (ENSMMUG00000011478) #21	CCNQ (ENSMMUG00000011480)	DUSP9 (ENSMMUG00000056988) #22	PNCK (ENSMMUG00000010585) #23	SLC6A8 (ENSMMUG00000012742) #24	BCAP31 (ENSMMUG00000012744) #25	ABCD1 (ENSMMUG00000012746) #26	SRPK3 (ENSMMUG00000003372) #28	IDH3G (ENSMMUG00000003374) #29	SSR4 (ENSMMUG00000003375) #30	PDZD4 (ENSMMUG00000003377) #31	L1CAM (ENSMMUG00000003379) #32	AVPR2 (ENSMMUG00000064945) #34	ARHGAP4 (ENSMMUG00000000323) #33	NAA10 (ENSMMUG00000000322) #35	RENBP (ENSMMUG00000000320) #36	HCFC1 (ENSMMUG00000000319) #37	TMEM187 (ENSMMUG00000005132)
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Olive baboon	MODERN SPECIES	792	IRAK1 (ENSPANG00000015781)	TMEM187 (ENSPANG00000050796)	HCFC1 (ENSPANG00000024276) #37	RENBP (ENSPANG00000008961) #36	NAA10 (ENSPANG00000014390) #35	ARHGAP4 (ENSPANG00000010087) #33	AVPR2 (ENSPANG00000004382) #34	L1CAM (ENSPANG00000013145) #32	PDZD4 (ENSPANG00000000291) #31	SSR4 (ENSPANG00000006591) #30	IDH3G (ENSPANG00000023323) #29	SRPK3 (ENSPANG00000004220) #28	PLXNB3 (ENSPANG00000008014) #27	ABCD1 (ENSPANG00000025399) #26	CCNQ (ENSPANG00000026424)	DUSP9 (ENSPANG00000004029) #22	PNCK (ENSPANG00000013747) #23	SLC6A8 (ENSPANG00000010089) #24	BCAP31 (ENSPANG00000001625) #25	ATP2B3 (ENSPANG00000014878) #21	BGN (ENSPANG00000022851) #20	HAUS7 (ENSPANG00000014066) #19	TREX2 (ENSPANG00000039672) #18	ZFP92 (ENSPANG00000006612) #17	ENSPANG00000035942	ENSPANG00000015246	PNMA6F (ENSPANG00000035246)	ENSPANG00000040158 #15	PNMA3 (ENSPANG00000008016)	PNMA5 (ENSPANG00000041264)	ZNF185 (ENSPANG00000011355) #12
Cercopithecinae_d	ANCESTRAL SPECIES	141								ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Sooty mangabey	MODERN SPECIES	286														ENSCATG00000032628	CCNQ (ENSCATG00000013187)	DUSP9 (ENSCATG00000009164) #22	ENSCATG00000003729	PNCK (ENSCATG00000041955) #23	SLC6A8 (ENSCATG00000001771) #24	BCAP31 (ENSCATG00000043253) #25	ABCD1 (ENSCATG00000042536) #26	PLXNB3 (ENSCATG00000037895) #27	SRPK3 (ENSCATG00000045096) #28	IDH3G (ENSCATG00000042112) #29	SSR4 (ENSCATG00000006344) #30	PDZD4 (ENSCATG00000043997) #31	L1CAM (ENSCATG00000041515) #32	AVPR2 (ENSCATG00000036647) #34	ARHGAP4 (ENSCATG00000042499) #33	NAA10 (ENSCATG00000038709) #35	RENBP (ENSCATG00000037009) #36
Drill	MODERN SPECIES	1411								PNMA6F (ENSMLEG00000035105)	ENSMLEG00000040255 #16	PNMA6E (ENSMLEG00000041204)	ZFP92 (ENSMLEG00000013319) #17	HAUS7 (ENSMLEG00000038483) #19	BGN (ENSMLEG00000029067) #20	ATP2B3 (ENSMLEG00000032665) #21	CCNQ (ENSMLEG00000039950)	DUSP9 (ENSMLEG00000042559) #22	ENSMLEG00000027362	PNCK (ENSMLEG00000027716) #23	SLC6A8 (ENSMLEG00000042530) #24	BCAP31 (ENSMLEG00000042884) #25	ABCD1 (ENSMLEG00000041428) #26	PLXNB3 (ENSMLEG00000032454) #27	IDH3G (ENSMLEG00000038908) #29	SSR4 (ENSMLEG00000016802) #30	PDZD4 (ENSMLEG00000004595) #31	L1CAM (ENSMLEG00000036326) #32	AVPR2 (ENSMLEG00000042889) #34	ARHGAP4 (ENSMLEG00000038659) #33	NAA10 (ENSMLEG00000032424) #35	RENBP (ENSMLEG00000038487) #36	HCFC1 (ENSMLEG00000042451) #37
Vervet Monkey	MODERN SPECIES	203	ENSCSAG00000006992	CETN2 (ENSCSAG00000006984) #10	NSDHL (ENSCSAG00000006982) #11	ZNF185 (ENSCSAG00000006979) #12	PNMA5 (ENSCSAG00000000526)	PNMA3 (ENSCSAG00000000525)	MAGEA1 (ENSCSAG00000000524)	ENSCSAG00000006975	ENSCSAG00000006968	ZFP92 (ENSCSAG00000006967) #17	HAUS7 (ENSCSAG00000006961) #19	ENSCSAG00000006955	BGN (ENSCSAG00000006954) #20	ATP2B3 (ENSCSAG00000006948) #21	CCNQ (ENSCSAG00000006940)	DUSP9 (ENSCSAG00000006926) #22	PNCK (ENSCSAG00000006923) #23	SLC6A8 (ENSCSAG00000006918) #24	BCAP31 (ENSCSAG00000006911) #25	PLXNB3 (ENSCSAG00000006893) #27	SRPK3 (ENSCSAG00000006884) #28	IDH3G (ENSCSAG00000006879) #29	SSR4 (ENSCSAG00000006874) #30	PDZD4 (ENSCSAG00000006871) #31	L1CAM (ENSCSAG00000006864) #32	AVPR2 (ENSCSAG00000006857) #34	ARHGAP4 (ENSCSAG00000006854) #33	NAA10 (ENSCSAG00000006823) #35	RENBP (ENSCSAG00000006814) #36	HCFC1 (ENSCSAG00000006809) #37	TMEM187 (ENSCSAG00000000523)
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.c	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a.f #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Cebidae	ANCESTRAL SPECIES	27	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.c	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a.f #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Marmoset	MODERN SPECIES	78	ENSCJAG00000016338 #10	NSDHL (ENSCJAG00000016347) #11	ZNF185 (ENSCJAG00000016363) #12	PNMA5 (ENSCJAG00000016373)	PNMA3 (ENSCJAG00000022542)	PWWP4 (ENSCJAG00000052872) #15	PNMA6F (ENSCJAG00000042286)	ENSCJAG00000019468	PNMA6E (ENSCJAG00000048415)	ZFP92 (ENSCJAG00000011538) #17	TREX2 (ENSCJAG00000011515) #18	HAUS7 (ENSCJAG00000036194) #19	BGN (ENSCJAG00000011493) #20	ATP2B3 (ENSCJAG00000011413) #21	ENSCJAG00000011407	DUSP9 (ENSCJAG00000047408) #22	ENSCJAG00000081213 #23	ENSCJAG00000011356 #24	BCAP31 (ENSCJAG00000011348) #25	ABCD1 (ENSCJAG00000011337) #26	PLXNB3 (ENSCJAG00000011267) #27	SRPK3 (ENSCJAG00000011233) #28	PDZD4 (ENSCJAG00000011185) #31	SSR4 (ENSCJAG00000011167) #30	ENSCJAG00000074256	ENSCJAG00000022809	L1CAM (ENSCJAG00000011023) #32	ARHGAP4 (ENSCJAG00000011008) #33	AVPR2 (ENSCJAG00000011022) #34	NAA10 (ENSCJAG00000014506) #35	RENBP (ENSCJAG00000014500) #36
Cebidae_a	ANCESTRAL SPECIES	78							ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445.c	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a.f #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Capuchin	MODERN SPECIES	597								ENSCCAG00000024093	ENSCCAG00000020739	ENSCCAG00000030112	ZFP92 (ENSCCAG00000034129) #17	HAUS7 (ENSCCAG00000030265) #19	BGN (ENSCCAG00000018493) #20	ATP2B3 (ENSCCAG00000027100) #21	CCNQ (ENSCCAG00000029897)	DUSP9 (ENSCCAG00000033198) #22	ENSCCAG00000023569	PNCK (ENSCCAG00000021403) #23	SLC6A8 (ENSCCAG00000035546) #24	BCAP31 (ENSCCAG00000033187) #25	ABCD1 (ENSCCAG00000019717) #26	PLXNB3 (ENSCCAG00000024352) #27	SRPK3 (ENSCCAG00000021599) #28	SSR4 (ENSCCAG00000020454) #30	PDZD4 (ENSCCAG00000022158) #31	L1CAM (ENSCCAG00000032233) #32	AVPR2 (ENSCCAG00000028592) #34	ARHGAP4 (ENSCCAG00000025262) #33	ENSCCAG00000033959 #35	RENBP (ENSCCAG00000037940) #36	HCFC1 (ENSCCAG00000021425) #37
Bolivian squirrel monkey	MODERN SPECIES	236								PNMA6F (ENSSBOG00000015383)	ENSSBOG00000027546	ENSSBOG00000030661	ZFP92 (ENSSBOG00000028775) #17	HAUS7 (ENSSBOG00000028472) #19	BGN (ENSSBOG00000029980) #20	ATP2B3 (ENSSBOG00000032052) #21	ENSSBOG00000029871	DUSP9 (ENSSBOG00000001225) #22	PNCK (ENSSBOG00000031039) #23	ENSSBOG00000033535 #24	ENSSBOG00000028295 #25	ABCD1 (ENSSBOG00000024968) #26	PLXNB3 (ENSSBOG00000025081) #27	SRPK3 (ENSSBOG00000024085) #28	IDH3G (ENSSBOG00000019899) #29	SSR4 (ENSSBOG00000022316) #30	PDZD4 (ENSSBOG00000033217) #31	L1CAM (ENSSBOG00000033301) #32	AVPR2 (ENSSBOG00000031595) #34	ARHGAP4 (ENSSBOG00000023946) #33	ENSSBOG00000020071 #35	RENBP (ENSSBOG00000034728) #36	HCFC1 (ENSSBOG00000034222) #37
Mas night monkey	MODERN SPECIES	1312								PNMA6F (ENSANAG00000025537)	ZNF275 (ENSANAG00000025581)	ENSANAG00000022983	ZFP92 (ENSANAG00000038344) #17	HAUS7 (ENSANAG00000022685) #19	BGN (ENSANAG00000033529) #20	ATP2B3 (ENSANAG00000032972) #21	ENSANAG00000000457	DUSP9 (ENSANAG00000019919) #22	PNCK (ENSANAG00000010774) #23	ENSANAG00000037607 #24	BCAP31 (ENSANAG00000035222) #25	ABCD1 (ENSANAG00000035583) #26	PLXNB3 (ENSANAG00000036384) #27	SRPK3 (ENSANAG00000037077) #28	ENSANAG00000024077 #29	SSR4 (ENSANAG00000035059) #30	PDZD4 (ENSANAG00000026191) #31	L1CAM (ENSANAG00000035752) #32	AVPR2 (ENSANAG00000022496) #34	ARHGAP4 (ENSANAG00000023680) #33	NAA10 (ENSANAG00000019745) #35	RENBP (ENSANAG00000034421) #36	HCFC1 (ENSANAG00000030898) #37
Tarsier	MODERN SPECIES	2197									ENSTSYG00000000195	ENSTSYG00000036390	ENSTSYG00000031978 #17	HAUS7 (ENSTSYG00000030026) #19	BGN (ENSTSYG00000030156) #20	ATP2B3 (ENSTSYG00000034877) #21	FAM58A (ENSTSYG00000026900)	DUSP9 (ENSTSYG00000026755) #22	PNCK (ENSTSYG00000034891) #23	ENSTSYG00000033997 #24	BCAP31 (ENSTSYG00000003985) #25	ABCD1 (ENSTSYG00000028624) #26	PLXNB3 (ENSTSYG00000032080) #27
Strepsirrhini	ANCESTRAL SPECIES	45	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b #15	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Lemuriformes	ANCESTRAL SPECIES	60	ENSGT00940000161201	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935.q.a #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Mouse lemur	MODERN SPECIES	169	GABRA3 (ENSMICG00000042718) #8	ENSMICG00000012692	ENSMICG00000013442	GABRQ (ENSMICG00000047310) #9	ENSMICG00000005862 #10	NSDHL (ENSMICG00000005868) #11	ZNF185 (ENSMICG00000005873) #12	ENSMICG00000046490	ENSMICG00000046759	ZFP92 (ENSMICG00000011893) #17	TREX2 (ENSMICG00000038278) #18	HAUS7 (ENSMICG00000000008) #19	BGN (ENSMICG00000000009) #20	ATP2B3 (ENSMICG00000000010) #21	CCNQ (ENSMICG00000032354)	DUSP9 (ENSMICG00000044469) #22	PNCK (ENSMICG00000013947) #23	ENSMICG00000003428 #24	BCAP31 (ENSMICG00000003437) #25	ABCD1 (ENSMICG00000003441) #26	PLXNB3 (ENSMICG00000003449) #27	SRPK3 (ENSMICG00000003464) #28	IDH3G (ENSMICG00000003472) #29	SSR4 (ENSMICG00000003476) #30	PDZD4 (ENSMICG00000027183) #31	L1CAM (ENSMICG00000003486) #32	AVPR2 (ENSMICG00000037091) #34	ARHGAP4 (ENSMICG00000016246) #33	NAA10 (ENSMICG00000010278) #35	RENBP (ENSMICG00000033869) #36	HCFC1 (ENSMICG00000016286) #37
Lemuriformes_a	ANCESTRAL SPECIES	110								ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Coquerels sifaka	MODERN SPECIES	882								ENSPCOG00000020542	ENSPCOG00000025588	ENSPCOG00000018479 ##16	TREX2 (ENSPCOG00000022646) #18	HAUS7 (ENSPCOG00000016936) #19	BGN (ENSPCOG00000018303) #20	ATP2B3 (ENSPCOG00000022001) #21	CCNQ (ENSPCOG00000020959)	DUSP9 (ENSPCOG00000021779) #22	PNCK (ENSPCOG00000019463) #23	ENSPCOG00000024763 #24	BCAP31 (ENSPCOG00000017960) #25	ABCD1 (ENSPCOG00000016908) #26	PLXNB3 (ENSPCOG00000024468) #27	SRPK3 (ENSPCOG00000018569) #28	IDH3G (ENSPCOG00000023374) #29	SSR4 (ENSPCOG00000028866) #30	PDZD4 (ENSPCOG00000025180) #31	L1CAM (ENSPCOG00000010437) #32	AVPR2 (ENSPCOG00000008409) #34	ARHGAP4 (ENSPCOG00000009927) #33	ENSPCOG00000027024 #35	RENBP (ENSPCOG00000013414) #36	HCFC1 (ENSPCOG00000028065) #37
Greater bamboo lemur	MODERN SPECIES	277							LARP7 (ENSPSMG00000003620)	ANK2 (ENSPSMG00000005110)	CAMK2D (ENSPSMG00000007663)	ARSJ (ENSPSMG00000008750)	ATP2B3 (ENSPSMG00000009254) #21	BGN (ENSPSMG00000009998) #20	HAUS7 (ENSPSMG00000010024) #19	TREX2 (ENSPSMG00000010030) #18	ZFP92 (ENSPSMG00000010034) #17	DUSP9 (ENSPSMG00000010039) #22	PNCK (ENSPSMG00000010066) #23	ENSPSMG00000010151 #24	ENSPSMG00000010220
Bushbaby	MODERN SPECIES	364					ENSOGAG00000029555 #15	ENSOGAG00000030548	ENSOGAG00000032682	ENSOGAG00000031649 #16	ZFP92 (ENSOGAG00000029963) #17	TREX2 (ENSOGAG00000033175) #18	HAUS7 (ENSOGAG00000008917) #19	ENSOGAG00000029324	BGN (ENSOGAG00000008920) #20	ATP2B3 (ENSOGAG00000008921) #21	ENSOGAG00000033279	DUSP9 (ENSOGAG00000002412) #22	PNCK (ENSOGAG00000006718) #23	ENSOGAG00000031270 #24	BCAP31 (ENSOGAG00000006721) #25	ABCD1 (ENSOGAG00000027153) #26	PLXNB3 (ENSOGAG00000003133) #27	SRPK3 (ENSOGAG00000003138) #28	ENSOGAG00000006735 #29	SSR4 (ENSOGAG00000006738) #30	PDZD4 (ENSOGAG00000006741) #31	L1CAM (ENSOGAG00000015077) #32	AVPR2 (ENSOGAG00000030887) #34	ARHGAP4 (ENSOGAG00000015087) #33	NAA10 (ENSOGAG00000013263) #35	RENBP (ENSOGAG00000032778) #36	HCFC1 (ENSOGAG00000015100) #37
Laurasiatheria	ANCESTRAL SPECIES	26	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b #15	ENSGT00390000000062.x.b #13	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161880 #22
Hedgehog	MODERN SPECIES	13152																DUSP9 (ENSEEUG00000001589) #22
Common shrew	MODERN SPECIES	2073																DUSP9 (ENSSARG00000007756) #22
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b #15	ENSGT00390000000062.x.b #13	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Suina	ANCESTRAL SPECIES	7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00910000144363.b	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Chacoan peccary	MODERN SPECIES	64													BGN (ENSCWAG00000015339) #20	ATP2B3 (ENSCWAG00000014036) #21	CCNQ (ENSCWAG00000013960)	DUSP9 (ENSCWAG00000013930) #22	PNCK (ENSCWAG00000013628) #23	ENSCWAG00000013485 #24	BCAP31 (ENSCWAG00000013428) #25	ABCD1 (ENSCWAG00000013367) #26	PLXNB3 (ENSCWAG00000013064) #27	SRPK3 (ENSCWAG00000012244) #28	IDH3G (ENSCWAG00000012166) #29	SSR4 (ENSCWAG00000012103) #30	PDZD4 (ENSCWAG00000011881) #31	L1CAM (ENSCWAG00000010938) #32	AVPR2 (ENSCWAG00000010837) #34	ARHGAP4 (ENSCWAG00000010083) #33	NAA10 (ENSCWAG00000009933) #35	RENBP (ENSCWAG00000009675) #36	HCFC1 (ENSCWAG00000009363) #37
Pig	MODERN SPECIES	300	ZNF185 (ENSSSCG00000012759) #12	PNMA5 (ENSSSCG00000038758)	ENSSSCG00000012762	ENSSSCG00000048272	ENSSSCG00000059750 #15	ENSSSCG00000057031 #15	ENSSSCG00000035599	ENSSSCG00000049239 #16	ENSSSCG00000030075	ZFP92 (ENSSSCG00000012768) #17	HAUS7 (ENSSSCG00000012767) #19	BGN (ENSSSCG00000012766) #20	SLC6A8 (ENSSSCG00000012771) #24	ATP2B3 (ENSSSCG00000012769) #21	CCNQ (ENSSSCG00000012770)	DUSP9 (ENSSSCG00000012774) #22	PNCK (ENSSSCG00000012773) #23	BCAP31 (ENSSSCG00000012772) #25	ABCD1 (ENSSSCG00000012779) #26	PLXNB3 (ENSSSCG00000012780) #27	ENSSSCG00000024676 #28	ENSSSCG00000053900 #28	IDH3G (ENSSSCG00000012783) #29	SSR4 (ENSSSCG00000012784) #30	PDZD4 (ENSSSCG00000012785) #31	L1CAM (ENSSSCG00000012787) #32	AVPR2 (ENSSSCG00000012789) #34	ARHGAP4 (ENSSSCG00000012790) #33	NAA10 (ENSSSCG00000012791) #35	RENBP (ENSSSCG00000012792) #36	HCFC1 (ENSSSCG00000012793) #37
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Cetacea	ANCESTRAL SPECIES	19	ENSGT00940000161201	ENSGT00940000154972 #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00940000161201	ENSGT00940000154972 #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00940000161201	ENSGT00940000154972 #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v.e.a #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00940000161201	ENSGT00940000154972 #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v.e.a #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00940000161201	ENSGT00940000154972 #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT00950000185059.b.a.a	ENSGT00940000153582.b.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v.e.a #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00390000013740 #36	ENSGT00940000161383 #37	ENSGT00390000011272
Beluga whale	MODERN SPECIES	139			CETN2 (ENSDLEG00000008486) #10	NSDHL (ENSDLEG00000008500) #11	ZNF185 (ENSDLEG00000008571) #12	ENSDLEG00000008777	ENSDLEG00000008821	ENSDLEG00000008874	ENSDLEG00000008903	ZFP92 (ENSDLEG00000008939) #17	TREX2 (ENSDLEG00000008947) #18	HAUS7 (ENSDLEG00000008961) #19	BGN (ENSDLEG00000009001) #20	ATP2B3 (ENSDLEG00000009068) #21	CCNQ (ENSDLEG00000009254)	DUSP9 (ENSDLEG00000009275) #22	PNCK (ENSDLEG00000009302) #23	ENSDLEG00000009357 #24	BCAP31 (ENSDLEG00000009436) #25	ABCD1 (ENSDLEG00000009490) #26	PLXNB3 (ENSDLEG00000009548) #27	SRPK3 (ENSDLEG00000009748) #28	IDH3G (ENSDLEG00000010539) #29	SSR4 (ENSDLEG00000010578) #30	PDZD4 (ENSDLEG00000010618) #31	L1CAM (ENSDLEG00000010633) #32	AVPR2 (ENSDLEG00000010715) #34	ARHGAP4 (ENSDLEG00000010745) #33	RENBP (ENSDLEG00000010782) #36	HCFC1 (ENSDLEG00000010826) #37	TMEM187 (ENSDLEG00000010884)
Narwhal	MODERN SPECIES	309	MAGEA10 (ENSMMNG00015011533) #7	GABRA3 (ENSMMNG00015011549) #8	GABRQ (ENSMMNG00015011628) #9	CETN2 (ENSMMNG00015011652) #10	NSDHL (ENSMMNG00015011668) #11	ENSMMNG00015011709 #12	ENSMMNG00015011751	PNMA5 (ENSMMNG00015011762)	ZNF275 (ENSMMNG00015011779)	ENSMMNG00015011848 #17	TREX2 (ENSMMNG00015011851) #18	HAUS7 (ENSMMNG00015011870) #19	BGN (ENSMMNG00015011917) #20	ATP2B3 (ENSMMNG00015011983) #21	CCNQ (ENSMMNG00015012078)	DUSP9 (ENSMMNG00015012090) #22	PNCK (ENSMMNG00015012107) #23	BCAP31 (ENSMMNG00015012134) #25	ABCD1 (ENSMMNG00015012167) #26	PLXNB3 (ENSMMNG00015012205) #27	SRPK3 (ENSMMNG00015012303) #28	IDH3G (ENSMMNG00015012488) #29	SSR4 (ENSMMNG00015012518) #30	PDZD4 (ENSMMNG00015012532) #31	L1CAM (ENSMMNG00015012599) #32	AVPR2 (ENSMMNG00015012757) #34	ARHGAP4 (ENSMMNG00015012794) #33	RENBP (ENSMMNG00015012853) #36	HCFC1 (ENSMMNG00015012895) #37	TMEM187 (ENSMMNG00015012935)	IRAK1 (ENSMMNG00015012947)
Vaquita	MODERN SPECIES	34	ENSPSNG00000016487	CETN2 (ENSPSNG00000016540) #10	NSDHL (ENSPSNG00000016593) #11	ENSPSNG00000016682 #12	ENSPSNG00000016703	ENSPSNG00000016766	ENSPSNG00000016858	ENSPSNG00000016906	ZNF275 (ENSPSNG00000016963)	ZFP92 (ENSPSNG00000017091) #17	TREX2 (ENSPSNG00000017121) #18	HAUS7 (ENSPSNG00000017146) #19	BGN (ENSPSNG00000017293) #20	ATP2B3 (ENSPSNG00000017785) #21	CCNQ (ENSPSNG00000020074)	DUSP9 (ENSPSNG00000020127) #22	PNCK (ENSPSNG00000020162) #23	ENSPSNG00000020216 #24	BCAP31 (ENSPSNG00000020287) #25	ABCD1 (ENSPSNG00000020339) #26	PLXNB3 (ENSPSNG00000020397) #27	SRPK3 (ENSPSNG00000020624) #28	IDH3G (ENSPSNG00000021007) #29	SSR4 (ENSPSNG00000021050) #30	PDZD4 (ENSPSNG00000021105) #31	L1CAM (ENSPSNG00000021249) #32	AVPR2 (ENSPSNG00000021500) #34	ARHGAP4 (ENSPSNG00000021560) #33	NAA10 (ENSPSNG00000021621) #35	ENSPSNG00000021660 #36	HCFC1 (ENSPSNG00000021713) #37
Dolphin	MODERN SPECIES	1323														ATP2B3 (ENSTTRG00000011664) #21	CCNQ (ENSTTRG00000011680)	DUSP9 (ENSTTRG00000011684) #22	PNCK (ENSTTRG00000011687) #23	ENSTTRG00000011689 #24	BCAP31 (ENSTTRG00000011698) #25	ABCD1 (ENSTTRG00000011702) #26	PLXNB3 (ENSTTRG00000011705) #27	SRPK3 (ENSTTRG00000011724) #28	IDH3G (ENSTTRG00000011728) #29
Sperm whale	MODERN SPECIES	13	GABRQ (ENSPCTG00005018852) #9	ENSPCTG00005018953	ENSPCTG00005018999	ENSPCTG00005019029	ENSPCTG00005019056	CETN2 (ENSPCTG00005019083) #10	NSDHL (ENSPCTG00005019131) #11	ZNF185 (ENSPCTG00005019207) #12	ENSPCTG00005019540	ENSPCTG00005019569 #16	ZFP92 (ENSPCTG00005019580) #17	HAUS7 (ENSPCTG00005019634) #19	BGN (ENSPCTG00005019735) #20	ATP2B3 (ENSPCTG00005019806) #21	CCNQ (ENSPCTG00005020427)	DUSP9 (ENSPCTG00005020457) #22	PNCK (ENSPCTG00005020491) #23	SLC6A8 (ENSPCTG00005020619) #24	BCAP31 (ENSPCTG00005020665) #25	ABCD1 (ENSPCTG00005020693) #26	PLXNB3 (ENSPCTG00005020721) #27	SRPK3 (ENSPCTG00005020896) #28	IDH3G (ENSPCTG00005021222) #29	SSR4 (ENSPCTG00005021260) #30	PDZD4 (ENSPCTG00005021324) #31	L1CAM (ENSPCTG00005021438) #32	AVPR2 (ENSPCTG00005021602) #34	ARHGAP4 (ENSPCTG00005021658) #33	NAA10 (ENSPCTG00005021859) #35	RENBP (ENSPCTG00005021884) #36	HCFC1 (ENSPCTG00005021915) #37
Blue whale	MODERN SPECIES	40	GABRQ (ENSBMSG00010021381) #9	ENSBMSG00010021410	ENSBMSG00010021416	ENSBMSG00010021420	ENSBMSG00010021428	ENSBMSG00010021440	CETN2 (ENSBMSG00010021445) #10	NSDHL (ENSBMSG00010021450) #11	ZNF185 (ENSBMSG00010016223) #12	ZFP92 (ENSBMSG00010016386) #17	TREX2 (ENSBMSG00010016424) #18	HAUS7 (ENSBMSG00010016441) #19	BGN (ENSBMSG00010016563) #20	ATP2B3 (ENSBMSG00010016642) #21	CCNQ (ENSBMSG00010017295)	DUSP9 (ENSBMSG00010017328) #22	PNCK (ENSBMSG00010017371) #23	ENSBMSG00010017516 #24	BCAP31 (ENSBMSG00010017577) #25	ABCD1 (ENSBMSG00010017634) #26	PLXNB3 (ENSBMSG00010017695) #27	SRPK3 (ENSBMSG00010017917) #28	IDH3G (ENSBMSG00010018140) #29	SSR4 (ENSBMSG00010018296) #30	PDZD4 (ENSBMSG00010018349) #31	L1CAM (ENSBMSG00010018510) #32	AVPR2 (ENSBMSG00010018770) #34	ARHGAP4 (ENSBMSG00010018853) #33	NAA10 (ENSBMSG00010019439) #35	RENBP (ENSBMSG00010019364) #36	HCFC1 (ENSBMSG00010019528) #37
Pecora	ANCESTRAL SPECIES	38						ENSGT00390000001700.a.b.b.a.a #15	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Yarkand deer	MODERN SPECIES	1323	TCEAL1 (ENSCHYG00000015273)	ENSCHYG00000015211	ENSCHYG00000026699	ENSCHYG00000026697	ENSCHYG00000026691 #13	ENSCHYG00000026686	ENSCHYG00000026676 #15	ENSCHYG00000026670	ENSCHYG00000026662	ENSCHYG00000026653 #17	TREX2 (ENSCHYG00000026645) #18	HAUS7 (ENSCHYG00000026596) #19	BGN (ENSCHYG00000026554) #20	ATP2B3 (ENSCHYG00000026445) #21	CCNQ (ENSCHYG00000026390)	DUSP9 (ENSCHYG00000026372) #22	PNCK (ENSCHYG00000026358) #23	ENSCHYG00000026332 #24	ENSCHYG00000026299 #25	ABCD1 (ENSCHYG00000026259) #26	PLXNB3 (ENSCHYG00000026217) #27	SRPK3 (ENSCHYG00000026187) #28	ENSCHYG00000026148 #29	ENSCHYG00000026124 #30	PDZD4 (ENSCHYG00000026107) #31	L1CAM (ENSCHYG00000025877) #32	AVPR2 (ENSCHYG00000025838) #34	ARHGAP4 (ENSCHYG00000025566) #33	ENSCHYG00000025281 #35	RENBP (ENSCHYG00000025248) #36	HCFC1 (ENSCHYG00000025112) #37
Percora_a	ANCESTRAL SPECIES	35						ENSGT00390000001700.a.b.b.a.a #15	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Siberian musk deer	MODERN SPECIES	14							ENSMMSG00000017989	ENSMMSG00000017963	ENSMMSG00000017951	ENSMMSG00000017851	TREX2 (ENSMMSG00000017821) #18	HAUS7 (ENSMMSG00000017752) #19	BGN (ENSMMSG00000017708) #20	ATP2B3 (ENSMMSG00000017117) #21	CCNQ (ENSMMSG00000017061)	DUSP9 (ENSMMSG00000017038) #22	PNCK (ENSMMSG00000016992) #23	ENSMMSG00000016948 #24	BCAP31 (ENSMMSG00000016925) #25	ABCD1 (ENSMMSG00000016894) #26	PLXNB3 (ENSMMSG00000016798) #27	SRPK3 (ENSMMSG00000016477) #28	IDH3G (ENSMMSG00000016400) #29	SSR4 (ENSMMSG00000016336) #30	PDZD4 (ENSMMSG00000016210) #31	L1CAM (ENSMMSG00000015717) #32	AVPR2 (ENSMMSG00000015654) #34	ARHGAP4 (ENSMMSG00000015607) #33	NAA10 (ENSMMSG00000015542) #35	RENBP (ENSMMSG00000015497) #36	HCFC1 (ENSMMSG00000015453) #37
Bovidae	ANCESTRAL SPECIES	33						ENSGT00390000001700.a.b.b.a.a #15	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Bovinae	ANCESTRAL SPECIES	46							ENSGT00390000001700.a.b.b.a.a #15	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Bos	ANCESTRAL SPECIES	36	ENSGT00390000016992.s	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000235238.e.b	ENSGT00390000001700.a.b.b.a.a #15	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Bos_b	ANCESTRAL SPECIES	31	ENSGT00940000154783.f	ENSGT00390000016992.s	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b.a.a #15	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Cow	MODERN SPECIES	177	CMC4 (ENSBTAG00000007813)	FUNDC2 (ENSBTAG00000016977)	F8 (ENSBTAG00000010726)	ENSBTAG00000033167	MPP1 (ENSBTAG00000013046)	DKC1 (ENSBTAG00000013045)	GAB3 (ENSBTAG00000013044)	ENSBTAG00000023820 #15	ENSBTAG00000020185	ENSBTAG00000047917	ENSBTAG00000050830 #17	HAUS7 (ENSBTAG00000014095) #19	BGN (ENSBTAG00000005250) #20	ATP2B3 (ENSBTAG00000000520) #21	CCNQ (ENSBTAG00000011350)	DUSP9 (ENSBTAG00000008319) #22	PNCK (ENSBTAG00000017430) #23	SLC6A8 (ENSBTAG00000009959) #24	BCAP31 (ENSBTAG00000020547) #25	ABCD1 (ENSBTAG00000020551) #26	PLXNB3 (ENSBTAG00000010146) #27	SRPK3 (ENSBTAG00000001058) #28	IDH3G (ENSBTAG00000001059) #29	SSR4 (ENSBTAG00000021421) #30	PDZD4 (ENSBTAG00000021422) #31	ENSBTAG00000038379	L1CAM (ENSBTAG00000013462) #32	AVPR2 (ENSBTAG00000047138) #34	ARHGAP4 (ENSBTAG00000047531) #33	NAA10 (ENSBTAG00000047702) #35	RENBP (ENSBTAG00000047827) #36
Hybrid Bos Indicus	MODERN SPECIES	315	FUNDC2 (ENSBIXG00005006322)	ENSBIXG00005011325	F8 (ENSBIXG00005006715)	MPP1 (ENSBIXG00005011616)	DKC1 (ENSBIXG00005011665)	GAB3 (ENSBIXG00005011700)	ENSBIXG00005011731 #15	ENSBIXG00005001157	ENSBIXG00005011758	ENSBIXG00005011766 #17	HAUS7 (ENSBIXG00005001172) #19	ENSBIXG00005011824	BGN (ENSBIXG00005011869) #20	ATP2B3 (ENSBIXG00005001219) #21	CCNQ (ENSBIXG00005012024)	ENSBIXG00005012054 #22	PNCK (ENSBIXG00005012167) #23	ENSBIXG00005012235 #24	BCAP31 (ENSBIXG00005012267) #25	ABCD1 (ENSBIXG00005001289) #26	PLXNB3 (ENSBIXG00005012308) #27	SRPK3 (ENSBIXG00005012339) #28	SSR4 (ENSBIXG00005012375) #30	PDZD4 (ENSBIXG00005012442) #31	ENSBIXG00005012493	L1CAM (ENSBIXG00005012618) #32	AVPR2 (ENSBIXG00005012700) #34	ARHGAP4 (ENSBIXG00005001429) #33	NAA10 (ENSBIXG00005012916) #35	RENBP (ENSBIXG00005007005) #36	HCFC1 (ENSBIXG00005013025) #37
Bos_a	ANCESTRAL SPECIES	39	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000235238.e.b	ENSGT00390000001700.a.b.b.a.a #15	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Domestic yak	MODERN SPECIES	69	F8 (ENSBGRG00000024985)	ENSBGRG00000017378	ENSBGRG00000017426	MPP1 (ENSBGRG00000017459)	DKC1 (ENSBGRG00000017777)	GAB3 (ENSBGRG00000018202)	ENSBGRG00000018336	ENSBGRG00000018361 #15	ENSBGRG00000018441	ENSBGRG00000018662 #17	HAUS7 (ENSBGRG00000018702) #19	ENSBGRG00000018982	BGN (ENSBGRG00000019034) #20	ATP2B3 (ENSBGRG00000019084) #21	CCNQ (ENSBGRG00000019445)	DUSP9 (ENSBGRG00000019532) #22	ENSBGRG00000019589 #23	ENSBGRG00000019737 #24	BCAP31 (ENSBGRG00000019806) #25	ABCD1 (ENSBGRG00000019899) #26	SRPK3 (ENSBGRG00000020582) #28	IDH3G (ENSBGRG00000020629) #29	ENSBGRG00000020770 #30	PDZD4 (ENSBGRG00000020897) #31	ENSBGRG00000020944	L1CAM (ENSBGRG00000020974) #32	AVPR2 (ENSBGRG00000021537) #34	ARHGAP4 (ENSBGRG00000021595) #33	NAA10 (ENSBGRG00000021764) #35	RENBP (ENSBGRG00000021852) #36	HCFC1 (ENSBGRG00000021965) #37
Wild yak	MODERN SPECIES	2346																DUSP9 (ENSBMUG00000011871) #22	PNCK (ENSBMUG00000011937) #23	ENSBMUG00000011967 #24	BCAP31 (ENSBMUG00000011987) #25	ABCD1 (ENSBMUG00000012003) #26	PLXNB3 (ENSBMUG00000012298) #27	SRPK3 (ENSBMUG00000012477) #28	IDH3G (ENSBMUG00000012493) #29	SSR4 (ENSBMUG00000012499) #30	PDZD4 (ENSBMUG00000012542) #31	L1CAM (ENSBMUG00000012610) #32	AVPR2 (ENSBMUG00000012644) #34	ARHGAP4 (ENSBMUG00000012757) #33	NAA10 (ENSBMUG00000012855) #35	RENBP (ENSBMUG00000012951) #36
Caprinae	ANCESTRAL SPECIES	45	ENSGT00940000161201	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT00390000001700.a.b.b.a.a #15	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Goat	MODERN SPECIES	65															CCNQ (ENSCHIG00000016499)	DUSP9 (ENSCHIG00000012585) #22	PNCK (ENSCHIG00000003212) #23	ENSCHIG00000021442 #24	BCAP31 (ENSCHIG00000012576) #25	ABCD1 (ENSCHIG00000020085) #26	PLXNB3 (ENSCHIG00000012234) #27	SRPK3 (ENSCHIG00000002559) #28	IDH3G (ENSCHIG00000016785) #29	SSR4 (ENSCHIG00000006805) #30	PDZD4 (ENSCHIG00000000364) #31
Rambouillet Sheep	MODERN SPECIES	205	CNGA2 (ENSOARG00020006792)	GABRA3 (ENSOARG00020006461) #8	CETN2 (ENSOARG00020025056) #10	NSDHL (ENSOARG00020025037) #11	ENSOARG00020024990	ENSOARG00020024988	ENSOARG00020024977 #15	ENSOARG00020024974	ENSOARG00020024952	ZFP92 (ENSOARG00020024935) #17	TREX2 (ENSOARG00020024928) #18	HAUS7 (ENSOARG00020024905) #19	BGN (ENSOARG00020024895) #20	ATP2B3 (ENSOARG00020024861) #21	CCNQ (ENSOARG00020024846)	DUSP9 (ENSOARG00020024837) #22	PNCK (ENSOARG00020024721) #23	ENSOARG00020024643 #24	BCAP31 (ENSOARG00020024614) #25	ABCD1 (ENSOARG00020024584) #26	PLXNB3 (ENSOARG00020024564) #27	IDH3G (ENSOARG00020024407) #29	SSR4 (ENSOARG00020024383) #30	PDZD4 (ENSOARG00020024315) #31	L1CAM (ENSOARG00020023921) #32	AVPR2 (ENSOARG00020023848) #34	ARHGAP4 (ENSOARG00020023326) #33	NAA10 (ENSOARG00020023246) #35	RENBP (ENSOARG00020023053) #36	HCFC1 (ENSOARG00020022415) #37	TMEM187 (ENSOARG00020022375)
Camelidae	ANCESTRAL SPECIES																	ENSGT00940000161880 #22
Arabian camel	MODERN SPECIES	204	SRPK3 (ENSCDRG00005020984) #28	ABCD1 (ENSCDRG00005020958) #26	BCAP31 (ENSCDRG00005020943) #25	ENSCDRG00005020937 #24	PNCK (ENSCDRG00005020913) #23	CCNQ (ENSCDRG00005020899)	ATP2B3 (ENSCDRG00005020884) #21	BGN (ENSCDRG00005020868) #20	HAUS7 (ENSCDRG00005020839) #19	TREX2 (ENSCDRG00005020829) #18	ZFP92 (ENSCDRG00005020817) #17	ENSCDRG00005020767	ENSCDRG00005020729	ENSCDRG00005020724 #13	ENSCDRG00005020712 #13	ENSCDRG00005020708 #22	ENSCDRG00005020698	PNMA6A (ENSCDRG00005020688)	ENSCDRG00005020680	ZNF185 (ENSCDRG00005018034) #12	NSDHL (ENSCDRG00005017818) #11	CETN2 (ENSCDRG00005017787) #10	GABRQ (ENSCDRG00005017608) #9	GABRA3 (ENSCDRG00005017512) #8	MAGEA10 (ENSCDRG00005017492) #7	GABRE (ENSCDRG00005017444)	CNGA2 (ENSCDRG00005017401)	FATE1 (ENSCDRG00005017356)	PRRG3 (ENSCDRG00005017332)	ENSCDRG00005017295	GPR50 (ENSCDRG00005017269)
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b #15	ENSGT00390000000062.x.b #13	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Carnivora	ANCESTRAL SPECIES	11	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Caniformia	ANCESTRAL SPECIES	22	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Caniformia_b	ANCESTRAL SPECIES	27	ENSGT00940000162167 #9	ENSGT00940000163823.e.b	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Ursidae	ANCESTRAL SPECIES	45	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C.b #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.h #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Ursus	ANCESTRAL SPECIES	211							ENSGT00390000000062.x.b #13	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C.b #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000155869.v #24	ENSGT00390000011863.c.h #25	ENSGT00950000182955.a.b.a #26	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31
Polar bear	MODERN SPECIES	330								ENSUMAG00000021273 #13	ENSUMAG00000021267 #15	ENSUMAG00000021264	ENSUMAG00000021253	HAUS7 (ENSUMAG00000021248) #19	BGN (ENSUMAG00000021244) #20	ATP2B3 (ENSUMAG00000020942) #21	CCNQ (ENSUMAG00000020894)	DUSP9 (ENSUMAG00000020891) #22	ENSUMAG00000020857 #24	BCAP31 (ENSUMAG00000020844) #25	SRPK3 (ENSUMAG00000020820) #28	IDH3G (ENSUMAG00000020814) #29	SSR4 (ENSUMAG00000020804) #30	NAA10 (ENSUMAG00000020773) #35	RENBP (ENSUMAG00000020768) #36	ENSUMAG00000020761	TMEM187 (ENSUMAG00000020759)	ENSUMAG00000020747	ENSUMAG00000020714	TEX28 (ENSUMAG00000020707)	TKTL1 (ENSUMAG00000020693)	EMD (ENSUMAG00000020684)	FLNA (ENSUMAG00000019645)
American black bear	MODERN SPECIES	6716																DUSP9 (ENSUAMG00000015423) #22
Giant Panda	MODERN SPECIES	2288	GABRE (ENSAMEG00000001520)	ENSAMEG00000012142 #8	GABRQ (ENSAMEG00000024249) #9	CETN2 (ENSAMEG00000000364) #10	NSDHL (ENSAMEG00000000343) #11	ZNF185 (ENSAMEG00000000294) #12	ENSAMEG00000000291	ENSAMEG00000024870	ENSAMEG00000029889	ENSAMEG00000008936 #17	TREX2 (ENSAMEG00000008933) #18	HAUS7 (ENSAMEG00000008916) #19	BGN (ENSAMEG00000008895) #20	ATP2B3 (ENSAMEG00000008798) #21	CCNQ (ENSAMEG00000008792)	DUSP9 (ENSAMEG00000023668) #22	PNCK (ENSAMEG00000008740) #23	BCAP31 (ENSAMEG00000008719) #25	ABCD1 (ENSAMEG00000008692) #26	PLXNB3 (ENSAMEG00000018468) #27	SRPK3 (ENSAMEG00000018467) #28	IDH3G (ENSAMEG00000018466) #29	SSR4 (ENSAMEG00000018465) #30	PDZD4 (ENSAMEG00000018464) #31	ENSAMEG00000009528	L1CAM (ENSAMEG00000018461) #32	AVPR2 (ENSAMEG00000018460) #34	ARHGAP4 (ENSAMEG00000018458) #33	NAA10 (ENSAMEG00000018457) #35	RENBP (ENSAMEG00000018452) #36	HCFC1 (ENSAMEG00000018450) #37
Mustelinae	ANCESTRAL SPECIES	108							ENSGT00390000001700.a.b.b #15	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
American mink	MODERN SPECIES	402								ENSNVIG00000024011 #15	ENSNVIG00000024008	ENSNVIG00000024007	ZFP92 (ENSNVIG00000024006) #17	HAUS7 (ENSNVIG00000024002) #19	BGN (ENSNVIG00000023999) #20	ATP2B3 (ENSNVIG00000023990) #21	CCNQ (ENSNVIG00000023988)	DUSP9 (ENSNVIG00000023986) #22	PNCK (ENSNVIG00000023984) #23	ENSNVIG00000023983 #24	BAP31 (ENSNVIG00000023982) #25	ABCD1 (ENSNVIG00000023981) #26	PLXNB3 (ENSNVIG00000023976) #27	SRPK3 (ENSNVIG00000023970) #28	IDH3G (ENSNVIG00000023966) #29	SSR4 (ENSNVIG00000023964) #30	PDZD4 (ENSNVIG00000023958) #31	L1CAM (ENSNVIG00000023921) #32	AVPR2 (ENSNVIG00000023918) #34	ARHGAP4 (ENSNVIG00000023893) #33	NAA10 (ENSNVIG00000023879) #35	RENBP (ENSNVIG00000023874) #36	HCFC1 (ENSNVIG00000023869) #37
Ferret	MODERN SPECIES	463				ENSMPUG00000019555	ENSMPUG00000019553	ENSMPUG00000016177	ZFP92 (ENSMPUG00000016176) #17	TREX2 (ENSMPUG00000019552) #18	HAUS7 (ENSMPUG00000016175) #19	ENSMPUG00000016174	BGN (ENSMPUG00000016173) #20	ATP2B3 (ENSMPUG00000016170) #21	CCNQ (ENSMPUG00000016164)	ENSMPUG00000016162	ENSMPUG00000016150	DUSP9 (ENSMPUG00000016151) #22	PNCK (ENSMPUG00000016148) #23	ENSMPUG00000016146 #24	ENSMPUG00000019549	ENSMPUG00000019547	ENSMPUG00000019545	ENSMPUG00000016145	ENSMPUG00000019543	GAB3 (ENSMPUG00000016143)	MPP1 (ENSMPUG00000016141)	F8 (ENSMPUG00000016139)	DKC1 (ENSMPUG00000016136)	BRCC3 (ENSMPUG00000016134)	ENSMPUG00000016133	ENSMPUG00000016131	RAB39B (ENSMPUG00000016129)
Canidae	ANCESTRAL SPECIES	50	ENSGT00940000163823.e.b.a.b	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b.n #15	ENSGT00390000000062.x.b #13	ENSGT00390000001700.a.b.b.m.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Canis_lupus	ANCESTRAL SPECIES	22	ENSGT00940000155935.g #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b.n #15	ENSGT00390000000062.x.b #13	ENSGT00390000001700.a.b.b.m.b.a #15	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Dog	MODERN SPECIES	144	ENSCAFG00845022365	ENSCAFG00845022410 #15	ENSCAFG00845022448	ENSCAFG00845022483 #19	ENSCAFG00845022582 #15	ENSCAFG00845022611	ENSCAFG00845022640	ENSCAFG00845022693 #13	ENSCAFG00845022737 #13	ENSCAFG00845022788 #15	ENSCAFG00845022808	ZFP92 (ENSCAFG00845023007) #17	BGN (ENSCAFG00845023053) #20	ATP2B3 (ENSCAFG00845023172) #21	CCNQ (ENSCAFG00845023588)	DUSP9 (ENSCAFG00845023663) #22	ENSCAFG00845023730 #23	ENSCAFG00845023957 #24	BCAP31 (ENSCAFG00845024213) #25	ABCD1 (ENSCAFG00845024327) #26	PLXNB3 (ENSCAFG00845024556) #27	SRPK3 (ENSCAFG00845024967) #28	IDH3G (ENSCAFG00845025145) #29	SSR4 (ENSCAFG00845025375) #30	PDZD4 (ENSCAFG00845025486) #31	L1CAM (ENSCAFG00845025647) #32	AVPR2 (ENSCAFG00845026015) #34	ARHGAP4 (ENSCAFG00845026108) #33	RENBP (ENSCAFG00845026554) #35	HCFC1 (ENSCAFG00845026790) #37	TMEM187 (ENSCAFG00845027090)
Dingo	MODERN SPECIES	383	ENSCAFG00020023229	GABRQ (ENSCAFG00020023222) #9	ENSCAFG00020023218 #10	NSDHL (ENSCAFG00020023215) #11	ZNF185 (ENSCAFG00020023207) #12	ENSCAFG00020023204	ENSCAFG00020023200 #15	ENSCAFG00020023197	ENSCAFG00020023196	ENSCAFG00020023194 #17	TREX2 (ENSCAFG00020023190) #18	HAUS7 (ENSCAFG00020023188) #19	BGN (ENSCAFG00020023184) #20	ATP2B3 (ENSCAFG00020022993) #21	CCNQ (ENSCAFG00020022953)	DUSP9 (ENSCAFG00020022952) #22	PNCK (ENSCAFG00020022950) #23	ENSCAFG00020022949 #24	BCAP31 (ENSCAFG00020022946) #25	ABCD1 (ENSCAFG00020022942) #26	PLXNB3 (ENSCAFG00020022936) #27	SRPK3 (ENSCAFG00020022932) #28	IDH3G (ENSCAFG00020022931) #29	SSR4 (ENSCAFG00020022930) #30	PDZD4 (ENSCAFG00020022928) #31	L1CAM (ENSCAFG00020022925) #32	AVPR2 (ENSCAFG00020022923) #34	ARHGAP4 (ENSCAFG00020022156) #33	NAA10 (ENSCAFG00020022123) #35	RENBP (ENSCAFG00020022111) #36	HCFC1 (ENSCAFG00020022091) #37
Red fox	MODERN SPECIES	263							ENSVVUG00000029721 #15	ENSVVUG00000029719	ENSVVUG00000029716	ZFP92 (ENSVVUG00000029715) #17	TREX2 (ENSVVUG00000029714) #18	HAUS7 (ENSVVUG00000029713) #19	BGN (ENSVVUG00000029707) #20	ATP2B3 (ENSVVUG00000029706) #21	CCNQ (ENSVVUG00000029705)	DUSP9 (ENSVVUG00000029702) #22	PNCK (ENSVVUG00000029700) #23	ENSVVUG00000029699 #24	ENSVVUG00000029696 #25	ENSVVUG00000029695 #26	ENSVVUG00000029694 #26	PLXNB3 (ENSVVUG00000029634) #27	IDH3G (ENSVVUG00000029622) #29	ENSVVUG00000029621 #30	PDZD4 (ENSVVUG00000029620) #31	L1CAM (ENSVVUG00000029611) #32	AVPR2 (ENSVVUG00000029607) #34	ARHGAP4 (ENSVVUG00000029605) #33	NAA10 (ENSVVUG00000029603) #35	RENBP (ENSVVUG00000029602) #36	HCFC1 (ENSVVUG00000029596) #37
Felidae	ANCESTRAL SPECIES	29								ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Panthera	ANCESTRAL SPECIES	56								ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Panthera_a	ANCESTRAL SPECIES	65								ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
lion	MODERN SPECIES	50											TREX2 (ENSPLOG00000017143) #18	ENSPLOG00000017109 #19	BGN (ENSPLOG00000017044) #20	ATP2B3 (ENSPLOG00000016345) #21	CCNQ (ENSPLOG00000016196)	DUSP9 (ENSPLOG00000016155) #22	PNCK (ENSPLOG00000015960) #23	ENSPLOG00000015847 #24	BCAP31 (ENSPLOG00000015741) #25	ABCD1 (ENSPLOG00000015686) #26	PLXNB3 (ENSPLOG00000015318) #27	SRPK3 (ENSPLOG00000014529) #28	IDH3G (ENSPLOG00000014245) #29	SSR4 (ENSPLOG00000014154) #30	PDZD4 (ENSPLOG00000013907) #31	L1CAM (ENSPLOG00000013396) #32	AVPR2 (ENSPLOG00000013280) #34	ARHGAP4 (ENSPLOG00000012775) #33	NAA10 (ENSPLOG00000012684) #35	RENBP (ENSPLOG00000012442) #36	HCFC1 (ENSPLOG00000011916) #37
leopard	MODERN SPECIES	214									ENSPPRG00000013055 #16	ENSPPRG00000013646	TREX2 (ENSPPRG00000017457) #18	HAUS7 (ENSPPRG00000014451) #19	BGN (ENSPPRG00000014620) #20	ATP2B3 (ENSPPRG00000024167) #21	CCNQ (ENSPPRG00000024044)	DUSP9 (ENSPPRG00000023875) #22	ENSPPRG00000000433 #23	PNCK (ENSPPRG00000002563) #23	ENSPPRG00000002840 #24	BCAP31 (ENSPPRG00000003191) #25	ABCD1 (ENSPPRG00000003214) #26	SRPK3 (ENSPPRG00000006472) #28	IDH3G (ENSPPRG00000007090) #29	SSR4 (ENSPPRG00000007302) #30	PDZD4 (ENSPPRG00000007757) #31	L1CAM (ENSPPRG00000010911) #32	ENSPPRG00000011145	AVPR2 (ENSPPRG00000011559) #34	ARHGAP4 (ENSPPRG00000019046) #33	NAA10 (ENSPPRG00000021297) #35	RENBP (ENSPPRG00000000874) #36
Cat	MODERN SPECIES	252	GABRA3 (ENSFCAG00000018801) #8	GABRQ (ENSFCAG00000003846) #9	ENSFCAG00000052762	CETN2 (ENSFCAG00000004901) #10	NSDHL (ENSFCAG00000004907) #11	ZNF185 (ENSFCAG00000004911) #12	ENSFCAG00000052684	PNMA3 (ENSFCAG00000003125)	ENSFCAG00000041838 #15	ENSFCAG00000052212 #13	ENSFCAG00000004665	TREX2 (ENSFCAG00000018938) #18	HAUS7 (ENSFCAG00000004027) #19	ATP2B3 (ENSFCAG00000004031) #21	CCNQ (ENSFCAG00000004033)	DUSP9 (ENSFCAG00000004034) #22	PNCK (ENSFCAG00000004035) #23	ENSFCAG00000004036 #24	BCAP31 (ENSFCAG00000004037) #25	ABCD1 (ENSFCAG00000004038) #26	PLXNB3 (ENSFCAG00000004039) #27	SRPK3 (ENSFCAG00000043991) #28	IDH3G (ENSFCAG00000033410) #29	SSR4 (ENSFCAG00000004040) #30	ARHGAP4 (ENSFCAG00000011385) #33	L1CAM (ENSFCAG00000008614) #32	AVPR2 (ENSFCAG00000011384) #34	NAA10 (ENSFCAG00000028705) #35	RENBP (ENSFCAG00000018690) #36	HCFC1 (ENSFCAG00000011387) #37	TMEM187 (ENSFCAG00000011388)
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT00390000001700.a.b.b #15	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Equus	ANCESTRAL SPECIES	52	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.hb.b	ENSGT00390000001700.a.b.b #15	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.ib	ENSGT00940000162887 #17	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Horse	MODERN SPECIES	480	ZNF185 (ENSECAG00000010142) #12	PNMA5 (ENSECAG00000000960)	ENSECAG00000031829	PNMA3 (ENSECAG00000000991)	ENSECAG00000035483	ENSECAG00000056746 #15	ENSECAG00000030904 #15	ENSECAG00000028315	ENSECAG00000014611	ZFP92 (ENSECAG00000015856) #17	HAUS7 (ENSECAG00000016027) #19	ECMX (ENSECAG00000018701)	BGN (ENSECAG00000018717) #20	ATP2B3 (ENSECAG00000023490) #21	CCNQ (ENSECAG00000026922)	DUSP9 (ENSECAG00000013650) #22	PNCK (ENSECAG00000036146) #23	SLC6A8 (ENSECAG00000013965) #24	BCAP31 (ENSECAG00000022787) #25	ABCD1 (ENSECAG00000022935) #26	PLXNB3 (ENSECAG00000000639) #27	SRPK3 (ENSECAG00000058187) #28	IDH3G (ENSECAG00000018509) #29	SSR4 (ENSECAG00000023150) #30	PDZD4 (ENSECAG00000024310) #31	L1CAM (ENSECAG00000002810) #32	AVPR2 (ENSECAG00000022974) #34	ARHGAP4 (ENSECAG00000023201) #33	NAA10 (ENSECAG00000015203) #35	RENBP (ENSECAG00000018888) #36	HCFC1 (ENSECAG00000022440) #37
Donkey	MODERN SPECIES	36	ENSEASG00005025853	ENSEASG00005023777	ENSEASG00005028277 #15	ENSEASG00005019400	ENSEASG00005031334	ENSEASG00005033113	ENSEASG00005026052	ENSEASG00005035618	ENSEASG00005023652	ENSEASG00005036517 #17	TREX2 (ENSEASG00005019558) #18	HAUS7 (ENSEASG00005019556) #19	BGN (ENSEASG00005035268) #20	ATP2B3 (ENSEASG00005019538) #21	CCNQ (ENSEASG00005019537)	DUSP9 (ENSEASG00005019536) #22	PNCK (ENSEASG00005019534) #23	ENSEASG00005019533 #24	BCAP31 (ENSEASG00005019531) #25	ABCD1 (ENSEASG00005019529) #26	PLXNB3 (ENSEASG00005019471) #27	SRPK3 (ENSEASG00005019451) #28	IDH3G (ENSEASG00005019382) #29	SSR4 (ENSEASG00005019363) #30	PDZD4 (ENSEASG00005028120) #31	L1CAM (ENSEASG00005019353) #32	AVPR2 (ENSEASG00005027808) #34	ARHGAP4 (ENSEASG00005019296) #33	NAA10 (ENSEASG00005030165) #35	RENBP (ENSEASG00005019286) #36	HCFC1 (ENSEASG00005019244) #37
Chiroptera	ANCESTRAL SPECIES	48	ENSGT00940000161201	ENSGT00940000154972 #7	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00910000144363	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT00910000146500	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Megabat	MODERN SPECIES	4214																DUSP9 (ENSPVAG00000012345) #22
Microchiroptera	ANCESTRAL SPECIES	45	ENSGT00940000159444 #8	ENSGT00940000162167 #9	ENSGT00910000144363	ENSGT00940000155935 #10	ENSGT00940000158229 #11	ENSGT00530000063872.A #12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000161383 #37
Greater horseshoe bat	MODERN SPECIES		ENSRFEG00010006156 #7	CETN2 (ENSRFEG00010006124) #10	NSDHL (ENSRFEG00010006063) #11	ZNF185 (ENSRFEG00010005969) #12	PNMA3 (ENSRFEG00010005848)	ENSRFEG00010005818 #15	ENSRFEG00010005799 #15	ENSRFEG00010005753	ENSRFEG00010005702	ENSRFEG00010005686	ENSRFEG00010005660	HAUS7 (ENSRFEG00010005503) #19	BGN (ENSRFEG00010005401) #20	ATP2B3 (ENSRFEG00010005284) #21	CCNQ (ENSRFEG00010005249)	DUSP9 (ENSRFEG00010005234) #22	PNCK (ENSRFEG00010005195) #23	ENSRFEG00010005165 #24	BCAP31 (ENSRFEG00010005136) #25	ABCD1 (ENSRFEG00010005067) #26	PLXNB3 (ENSRFEG00010005005) #27	SRPK3 (ENSRFEG00010004974) #28	IDH3G (ENSRFEG00010004950) #29	SSR4 (ENSRFEG00010004934) #30	PDZD4 (ENSRFEG00010004912) #31	L1CAM (ENSRFEG00010004838) #32	ENSRFEG00010004798	AVPR2 (ENSRFEG00010004785) #34	ARHGAP4 (ENSRFEG00010004760) #33	ARD1A (ENSRFEG00010004730) #35	RENBP (ENSRFEG00010004689) #36
Microbat	MODERN SPECIES	977	ENSMLUG00000014520 #10	NSDHL (ENSMLUG00000014525) #11	ZNF185 (ENSMLUG00000015980) #12	ENSMLUG00000022293	ENSMLUG00000025329	ENSMLUG00000023246 #15	ENSMLUG00000025774 #15	ENSMLUG00000006827	ENSMLUG00000028854	TREX2 (ENSMLUG00000027143) #18	ENSMLUG00000010516 #19	ENSMLUG00000025983	ENSMLUG00000010569 #20	ATP2B3 (ENSMLUG00000010583) #21	CCNQ (ENSMLUG00000012844)	DUSP9 (ENSMLUG00000008666) #22	PNCK (ENSMLUG00000008649) #23	ENSMLUG00000004391 #24	BCAP31 (ENSMLUG00000004416) #25	ABCD1 (ENSMLUG00000004423) #26	PLXNB3 (ENSMLUG00000004428) #27	SRPK3 (ENSMLUG00000004445) #28	ENSMLUG00000004457 #29	SSR4 (ENSMLUG00000004462) #30	PDZD4 (ENSMLUG00000004464) #31	L1CAM (ENSMLUG00000014234) #32	AVPR2 (ENSMLUG00000014253) #34	ARHGAP4 (ENSMLUG00000014257) #33	NAA10 (ENSMLUG00000014267) #35	RENBP (ENSMLUG00000014271) #36	HCFC1 (ENSMLUG00000014275) #37
Atlantogenata	ANCESTRAL SPECIES	70		ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT00940000154411.`b.i.f	ENSGT01100000263534.b.k.a.b.b	ENSGT01100000263507.D.a.a.b.a	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000166196
Afrotheria	ANCESTRAL SPECIES	82								ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000166196
Afrotheria_a	ANCESTRAL SPECIES	81								ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #17	ENSGT00950000182890.D.c.b.a.a.a #16	ENSGT00390000012715.a #18	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00550000074803 #35	ENSGT00390000013740 #36	ENSGT00940000166196
Elephant	MODERN SPECIES	50								ENSLAFG00000027476 #15	ENSLAFG00000026228	ENSLAFG00000022395 #16	TREX2 (ENSLAFG00000025805) #18	BGN (ENSLAFG00000002207) #20	ATP2B3 (ENSLAFG00000002208) #21	CCNQ (ENSLAFG00000029369)	HAUS7 (ENSLAFG00000005743) #19	DUSP9 (ENSLAFG00000031085) #22	PNCK (ENSLAFG00000013695) #23	ENSLAFG00000012168 #24	BCAP31 (ENSLAFG00000022717) #25	ABCD1 (ENSLAFG00000027794) #26	PLXNB3 (ENSLAFG00000002638) #27	SRPK3 (ENSLAFG00000006899) #28	IDH3G (ENSLAFG00000006904) #29	SSR4 (ENSLAFG00000006908) #30	PDZD4 (ENSLAFG00000025865) #31	L1CAM (ENSLAFG00000021925) #32	AVPR2 (ENSLAFG00000027738) #34	ARHGAP4 (ENSLAFG00000014809) #33	NAA10 (ENSLAFG00000007025) #35	RENBP (ENSLAFG00000007027) #36	ENSLAFG00000028984
Tenrec	MODERN SPECIES	9696																ENSETEG00000008182 #22
Marsupialia	ANCESTRAL SPECIES	40						ENSGT00940000164372	ENSGT00940000164592	ENSGT01060000248564.b.a.b.b	ENSGT00390000003937.c.b #19	ENSGT00390000012715.a #18	ENSGT00390000003937.c.a #19	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c.b #25	ENSGT00390000011863.c.a.a #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.b ##29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00390000016224.j.a	ENSGT00550000074803 #35
Opossum	MODERN SPECIES	627	EDA2R (ENSMODG00000012440)	ENSMODG00000012445	ENSMODG00000027338	ENSMODG00000043924	ENSMODG00000012459	ENSMODG00000012465	ENSMODG00000012494	ENSMODG00000007462	ENSMODG00000022849	ENSMODG00000029017 #19	ENSMODG00000050925 #18	ENSMODG00000007539 #19	ENSMODG00000022847	ENSMODG00000008043	ATP2B3 (ENSMODG00000008152) #21	DUSP9 (ENSMODG00000008174) #22	PNCK (ENSMODG00000008192) #23	ENSMODG00000008271 #24	BCAP31 (ENSMODG00000008300) #25	ABCD1 (ENSMODG00000008330) #26	PLXNB3 (ENSMODG00000008407) #27	SRPK3 (ENSMODG00000039232) #28	ENSMODG00000008568 ##29	SSR4 (ENSMODG00000008581) #30	PDZD4 (ENSMODG00000008596) #31	L1CAM (ENSMODG00000008677) #32	ENSMODG00000002236	ENSMODG00000047866	DNAAF6 (ENSMODG00000002249)	ENSMODG00000002278	ENSMODG00000050281
Marsupialia_b	ANCESTRAL SPECIES	37						ENSGT00940000164372	ENSGT00940000164592	ENSGT01060000248564.b.a.b.b	ENSGT00390000003937.c.b #19	ENSGT00390000012715.a #18	ENSGT00390000003937.c.a #19	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c.b #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.b ##29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00390000016224.j.a	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Diprotodontia	ANCESTRAL SPECIES	81						ENSGT00940000164372	ENSGT00940000164592	ENSGT01060000248564.b.a.b.b	ENSGT00390000003937.c.b #19	ENSGT00390000012715.a #18	ENSGT00390000003937.c.a #19	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c.b #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.b ##29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00390000016224.j.a	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Diprotodontia_a	ANCESTRAL SPECIES	79						ENSGT00940000164372	ENSGT00940000164592	ENSGT01060000248564.b.a.b.b	ENSGT00390000003937.c.b #19	ENSGT00390000012715.a #18	ENSGT00390000003937.c.a.a #19	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c.b #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a.g.b ##29	ENSGT00390000008992.a #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000182824.a.b.b #33	ENSGT00390000016224.j.a	ENSGT00550000074803 #35	ENSGT00390000013740 #36
Common wonbat	MODERN SPECIES	1157															ATP2B3 (ENSVURG00010020897) #21	DUSP9 (ENSVURG00010020940) #22	PNCK (ENSVURG00010020947) #23	ENSVURG00010020979 #24	BCAP31 (ENSVURG00010020986) #25	ABCD1 (ENSVURG00010021008) #26	PLXNB3 (ENSVURG00010021147) #27	SRPK3 (ENSVURG00010021162) #28	ENSVURG00010021172 ##29	ENSVURG00010021186 #30	PDZD4 (ENSVURG00010021202) #31	L1CAM (ENSVURG00010021232) #32	AVPR2 (ENSVURG00010021274) #34	ARHGAP4 (ENSVURG00010021281) #33	ENSVURG00010021294	NAA10 (ENSVURG00010021302) #35	RENBP (ENSVURG00010021310) #36
koala	MODERN SPECIES	310					ENSPCIG00000011061	ENSPCIG00000034875	ENSPCIG00000000101	ENSPCIG00000000183	ENSPCIG00000034352 #19	TREX2 (ENSPCIG00000009700) #18	ENSPCIG00000033247 #19	ENSPCIG00000010240	ENSPCIG00000001499	BGN (ENSPCIG00000016827) #20	ATP2B3 (ENSPCIG00000008574) #21	DUSP9 (ENSPCIG00000017701) #22	ENSPCIG00000017699 #23	ENSPCIG00000017698 #24	BCAP31 (ENSPCIG00000017694) #25	ABCD1 (ENSPCIG00000017689) #26	PLXNB3 (ENSPCIG00000016447) #27	SRPK3 (ENSPCIG00000016407) #28	ENSPCIG00000016406 ##29	ENSPCIG00000016404 #30	PDZD4 (ENSPCIG00000016403) #31	L1CAM (ENSPCIG00000003277) #32	AVPR2 (ENSPCIG00000012251) #34	ARHGAP4 (ENSPCIG00000012250) #33	ENSPCIG00000037377	NAA10 (ENSPCIG00000035783) #35	RENBP (ENSPCIG00000016399) #36
Wallaby	MODERN SPECIES	14571																ENSMEUG00000003454 #22
Tasmanian devil	MODERN SPECIES	21	CLDN2 (ENSSHAG00000032255)	ENSSHAG00000021575	ENSSHAG00000002285	ENSSHAG00000002038	ENSSHAG00000005765	ENSSHAG00000001308	ENSSHAG00000002527	ENSSHAG00000021923	ENSSHAG00000021553 #19	ENSSHAG00000028821 #18	ENSSHAG00000025093 #19	ENSSHAG00000021114	ENSSHAG00000001909	BGN (ENSSHAG00000030752) #20	ATP2B3 (ENSSHAG00000005720) #21	DUSP9 (ENSSHAG00000007865) #22	PNCK (ENSSHAG00000008570) #23	ENSSHAG00000009030 #24	ENSSHAG00000009111 #25	ENSSHAG00000009362 #26	PLXNB3 (ENSSHAG00000009796) #27	SRPK3 (ENSSHAG00000000037) #28	ENSSHAG00000001102 ##29	SSR4 (ENSSHAG00000021208) #30	PDZD4 (ENSSHAG00000000157) #31	L1CAM (ENSSHAG00000003280) #32	AVPR2 (ENSSHAG00000004862) #34	ENSSHAG00000005769	ARHGAP4 (ENSSHAG00000004979) #33	NAA10 (ENSSHAG00000005952) #35	RENBP (ENSSHAG00000006063) #36
Platypus	MODERN SPECIES	17	FAM120C (ENSOANG00000000710)	WNK3 (ENSOANG00000000708)	TSR2 (ENSOANG00000000707)	FGD1 (ENSOANG00000000703)	GNL3L (ENSOANG00000000700)	ENSOANG00000000695	ENSOANG00000020339	PFKFB1 (ENSOANG00000000691)	APEX2 (ENSOANG00000040218)	ALAS2 (ENSOANG00000000687)	TREX2 (ENSOANG00000000686) #18	ENSOANG00000029619	BGN (ENSOANG00000000684) #20	ATP2B3 (ENSOANG00000000679) #21	CCNQ (ENSOANG00000000678)	DUSP9 (ENSOANG00000005316) #22	PNCK (ENSOANG00000036709) #23	ENSOANG00000010213 #24	BCAP31 (ENSOANG00000010212) #25	ABCD1 (ENSOANG00000041560) #26	PLXNB3 (ENSOANG00000005185) #27	SRPK3 (ENSOANG00000005184) #28	IDH3G (ENSOANG00000005183) #29	SSR4 (ENSOANG00000036977) #30	PDZD4 (ENSOANG00000005181) #31	L1CAM (ENSOANG00000009415) #32	AVPR2 (ENSOANG00000005890) #34	ENSOANG00000005889	ARHGAP4 (ENSOANG00000005180) #33	NAA10 (ENSOANG00000002893) #35	RENBP (ENSOANG00000002892) #36
Sauria	ANCESTRAL SPECIES	13	ENSGT00390000008983.a	ENSGT01030000237821	ENSGT00940000155071.E	ENSGT00940000158384	ENSGT00940000154861	ENSGT00940000157717	ENSGT01030000234648.a.a.d	ENSGT00940000158813	ENSGT00440000038003	ENSGT00940000163873.l	ENSGT00940000163873.k	ENSGT00390000003937 #19	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000008992 #30	ENSGT00950000183062.a.b #31	ENSGT00940000157506 #32	ENSGT01050000244882.b.c.b #34	ENSGT00950000183006.A.a.b	ENSGT00950000183006.B.f.b.b	ENSGT01050000244882.a.a.b ##34	ENSGT00390000011230
Lepidosauria	ANCESTRAL SPECIES	38	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #33	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #34	ENSGT00940000157506 #32	ENSGT00950000183062.a.b #31	ENSGT00390000008992 #30	ENSGT00940000153588.b	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Episquamata	ANCESTRAL SPECIES	23	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00950000183062.a.b #31	ENSGT00390000008992 #30	ENSGT00940000153588.b	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00550000074803 #35	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #33	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #34	ENSGT00940000157506 #32	ENSGT00950000183062.a.b #31	ENSGT00390000008992 #30	ENSGT00940000153588.b	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Elapidae	ANCESTRAL SPECIES	21	ENSGT00550000074803 #35	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #33	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #34	ENSGT00940000157506.a #32	ENSGT00950000183062.a.b #31	ENSGT00390000008992 #30	ENSGT00940000153588.b	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Indian cobra	MODERN SPECIES	1	ARHGAP4 (ENSNNAG00000018669) #33	CAV3 (ENSNNAG00000018661)	ENSNNAG00000018657	AVPR2 (ENSNNAG00000018655) #34	L1CAM (ENSNNAG00000018628) #32	ENSNNAG00000018620 #31	ENSNNAG00000018618	ENSNNAG00000018610 #31	SSR4 (ENSNNAG00000018601) #30	ENSNNAG00000018599	FLNA (ENSNNAG00000010196)	HAUS7 (ENSNNAG00000008940) #19	BGN (ENSNNAG00000008914) #20	ATP2B3 (ENSNNAG00000007314) #21	CCNQ (ENSNNAG00000007203)	DUSP9 (ENSNNAG00000007195) #22	PNCK (ENSNNAG00000007117) #23	ENSNNAG00000004889 #24	BCAP31 (ENSNNAG00000004742) #25	ABCD1 (ENSNNAG00000004643) #26	ENSNNAG00000004620 #27	ENSNNAG00000004602	ENSNNAG00000018745	ENSNNAG00000018733 #27	ENSNNAG00000018721 #28	IDH3G (ENSNNAG00000018712) #29	ENSNNAG00000018704	DNASE1L1 (ENSNNAG00000018696)	TAFAZZIN (ENSNNAG00000018691)	ATP6AP1 (ENSNNAG00000018685)	GDI1 (ENSNNAG00000018677)
Elapidae_a	ANCESTRAL SPECIES	23	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #33	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #34	ENSGT00940000157506.a #32	ENSGT00940000157506.b #32	ENSGT00950000183062.a.b #31	ENSGT00390000008992 #30	ENSGT00940000153588.b	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a.f #26	ENSGT00950000182955.a.b.a.e #26	ENSGT01020000230394.e.a.a.b.a.b.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C
Acanthophiinae	ANCESTRAL SPECIES	23	ENSGT00550000074803 #35	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #33	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #34	ENSGT00940000157506.a #32	ENSGT00950000183062.a.b #31	ENSGT00390000008992 #30	ENSGT00940000153588.b	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a.f #26	ENSGT00950000182955.a.b.a.e #26	ENSGT01020000230394.e.a.a.b.a.b.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C
Eastern brown snake	MODERN SPECIES	52	RENBP (ENSPTXG00000004959) #36	NAA10 (ENSPTXG00000004961) #35	ENSPTXG00000004963	ARHGAP4 (ENSPTXG00000004965) #33	CAV3 (ENSPTXG00000004995)	ENSPTXG00000004997	AVPR2 (ENSPTXG00000004998) #34	L1CAM (ENSPTXG00000004999) #32	PDZD4 (ENSPTXG00000005007) #31	SSR4 (ENSPTXG00000005008) #30	FLNA (ENSPTXG00000005011)	HAUS7 (ENSPTXG00000005012) #19	BGN (ENSPTXG00000005013) #20	ATP2B3 (ENSPTXG00000005014) #21	CCNQ (ENSPTXG00000005700)	DUSP9 (ENSPTXG00000005701) #22	PNCK (ENSPTXG00000005709) #23	ENSPTXG00000005710 #24	BCAP31 (ENSPTXG00000005711) #25	ENSPTXG00000005712 #26	ENSPTXG00000005713 #26	PLXNB3 (ENSPTXG00000005731) #27	SRPK3 (ENSPTXG00000007997) #28	IDH3G (ENSPTXG00000007998) #29	ENSPTXG00000007999	ENSPTXG00000006589	DNASE1L1 (ENSPTXG00000006590)	TAFAZZIN (ENSPTXG00000006591)	ATP6AP1 (ENSPTXG00000006592)	GDI1 (ENSPTXG00000006593)	ENSPTXG00000006594
Mainland tiger snake	MODERN SPECIES	81	NAA10 (ENSNSUG00000014942) #35	ENSNSUG00000014943	ARHGAP4 (ENSNSUG00000014999) #33	CAV3 (ENSNSUG00000015005)	ENSNSUG00000015006	AVPR2 (ENSNSUG00000015007) #34	L1CAM (ENSNSUG00000015009) #32	PDZD4 (ENSNSUG00000015010) #31	SSR4 (ENSNSUG00000015011) #30	FLNA (ENSNSUG00000015014)	HAUS7 (ENSNSUG00000015675) #19	ENSNSUG00000015676	BGN (ENSNSUG00000015677) #20	ATP2B3 (ENSNSUG00000015687) #21	CCNQ (ENSNSUG00000015690)	DUSP9 (ENSNSUG00000015691) #22	PNCK (ENSNSUG00000015692) #23	ENSNSUG00000015693 #24	ENSNSUG00000015694 #24	BCAP31 (ENSNSUG00000015695) #25	ENSNSUG00000015696 #26	ENSNSUG00000015697 #26	ENSNSUG00000015698 #27	ENSNSUG00000015699 #27	SRPK3 (ENSNSUG00000015700) #28	IDH3G (ENSNSUG00000015701) #29	ENSNSUG00000015702	ENSNSUG00000015704	DNASE1L1 (ENSNSUG00000015705)	TAFAZZIN (ENSNSUG00000015706)	ATP6AP1 (ENSNSUG00000015714)
Blue-lipped sea krait	MODERN SPECIES	2741																DUSP9 (ENSLLTG00000002032) #22	PNCK (ENSLLTG00000001996) #23	ENSLLTG00000001970 #24
Lizard	MODERN SPECIES	1	NAA10 (ENSACAG00000012233) #35	ENSACAG00000012219	ARHGAP4 (ENSACAG00000011924) #33	CAV3 (ENSACAG00000040122)	ENSACAG00000011878	AVPR2 (ENSACAG00000021016) #34	L1CAM (ENSACAG00000011487) #32	ENSACAG00000040437	PDZD4 (ENSACAG00000036143) #31	SSR4 (ENSACAG00000011328) #30	ENSACAG00000009800	HAUS7 (ENSACAG00000009779) #19	BGN (ENSACAG00000009615) #20	ATP2B3 (ENSACAG00000009210) #21	CCNQ (ENSACAG00000009190)	DUSP9 (ENSACAG00000009178) #22	ENSACAG00000044476	PNCK (ENSACAG00000008973) #23	ENSACAG00000008691 #24	ENSACAG00000045378	BCAP31 (ENSACAG00000008629) #25	ABCD1 (ENSACAG00000008539) #26	ENSACAG00000029519	PLXNB3 (ENSACAG00000008378) #27	SRPK3 (ENSACAG00000008280) #28	IDH3G (ENSACAG00000008220) #29	ENSACAG00000008192	ENSACAG00000026130	ENSACAG00000008098	ENSACAG00000007871	ENSACAG00000007823
Laterata	ANCESTRAL SPECIES	7	ENSGT00550000074803 #35	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #33	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #34	ENSGT00940000157506 #32	ENSGT00950000183062.a.b #31	ENSGT00390000008992 #30	ENSGT00940000153588.b	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #28	ENSGT00950000182989.D.a.a #29	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a	ENSGT00410000025802
Common wall lizard	MODERN SPECIES	8	ARHGAP4 (ENSPMRG00000021373) #33	CAV3 (ENSPMRG00000021320)	ENSPMRG00000021311	AVPR2 (ENSPMRG00000021305) #34	ENSPMRG00000021296	ENSPMRG00000021287	L1CAM (ENSPMRG00000021230) #32	PDZD4 (ENSPMRG00000021208) #31	SSR4 (ENSPMRG00000021193) #30	ENSPMRG00000021190	FLNA (ENSPMRG00000021086)	HAUS7 (ENSPMRG00000021057) #19	BGN (ENSPMRG00000021052) #20	ATP2B3 (ENSPMRG00000023951) #21	CCNQ (ENSPMRG00000023950)	DUSP9 (ENSPMRG00000023948) #22	PNCK (ENSPMRG00000023947) #23	ENSPMRG00000023946 #24	BCAP31 (ENSPMRG00000023945) #25	ABCD1 (ENSPMRG00000023944) #26	PLXNB3 (ENSPMRG00000023943) #27	SRPK3 (ENSPMRG00000023942) #28	IDH3G (ENSPMRG00000023941) #29	ENSPMRG00000023939	DNASE1L1 (ENSPMRG00000023938)	TAFAZZIN (ENSPMRG00000023937)	ATP6AP1 (ENSPMRG00000023936)	GDI1 (ENSPMRG00000023935)	ENSPMRG00000023934	PLXNA3 (ENSPMRG00000023922)	ENSPMRG00000023892
Argentine black and white tegu	MODERN SPECIES	12	ENSSMRG00000002333	NAA10 (ENSSMRG00000002335) #35	ENSSMRG00000002344	ARHGAP4 (ENSSMRG00000002350) #33	CAV3 (ENSSMRG00000002372)	ENSSMRG00000002373	AVPR2 (ENSSMRG00000002377) #34	L1CAM (ENSSMRG00000002421) #32	PDZD4 (ENSSMRG00000002457) #31	FLNA (ENSSMRG00000002470)	HAUS7 (ENSSMRG00000002500) #19	ENSSMRG00000002504	BGN (ENSSMRG00000002508) #20	ATP2B3 (ENSSMRG00000002530) #21	CCNQ (ENSSMRG00000002583)	DUSP9 (ENSSMRG00000002591) #22	PNCK (ENSSMRG00000002638) #23	ENSSMRG00000002650 #24	BCAP31 (ENSSMRG00000002653) #25	ABCD1 (ENSSMRG00000002654) #26	PLXNB3 (ENSSMRG00000002754) #27	SRPK3 (ENSSMRG00000002758) #28	IDH3G (ENSSMRG00000002761) #29	ENSSMRG00000002764	DNASE1L1 (ENSSMRG00000002768)	TAFAZZIN (ENSSMRG00000002769)	ATP6AP1 (ENSSMRG00000002776)	GDI1 (ENSSMRG00000002779)	ENSSMRG00000002783	PLXNA3 (ENSSMRG00000002851)	ENSSMRG00000002873
tuatara	MODERN SPECIES	315																DUSP9 (ENSSPUG00000002001) #22
Archelosauria	ANCESTRAL SPECIES	75													ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937 #19	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Cryptodira	ANCESTRAL SPECIES	95													ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937 #19	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Testudinoidea	ANCESTRAL SPECIES	51					ENSGT00390000011272	ENSGT00940000160502	ENSGT00530000063687.b.b.b.j	ENSGT01030000234549.a.a.a.a.a.a	ENSGT01030000234549.a.a.a.b	ENSGT00940000161969	ENSGT01060000248768	ENSGT00940000154471.a.a	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a.g	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT00940000165180	ENSGT00530000063435.a
Testudinidae	ANCESTRAL SPECIES	82													ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937 #19	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a.g	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT00940000165180.g	ENSGT00530000063435.a
Goode s thornscrub tortoise	MODERN SPECIES	194			L1CAM (ENSGEVG00005019079) #32	ENSGEVG00005019065 #30	IDH3G (ENSGEVG00005019054) #29	TMEM187 (ENSGEVG00005019030)	IRAK1 (ENSGEVG00005018287)	MECP2 (ENSGEVG00005018139)	ENSGEVG00005018118	TKTL2 (ENSGEVG00005017921)	ENSGEVG00005017874	ENSGEVG00005017852	BGN (ENSGEVG00005017820) #20	ATP2B3 (ENSGEVG00005016987) #21	CCNQ (ENSGEVG00005016840)	DUSP9 (ENSGEVG00005016821) #22	ENSGEVG00005016786 #19
Abingdon island giant tortoise	MODERN SPECIES	1863														ATP2B3 (ENSCABG00000022671) #21	ENSCABG00000022664	DUSP9 (ENSCABG00000022663) #22	FLNA (ENSCABG00000016076)	ENSCABG00000015472	ENSCABG00000015469	DNASE1L1 (ENSCABG00000015466)	ATP6AP1 (ENSCABG00000015464)	GDI1 (ENSCABG00000015246)	ENSCABG00000015173
Emydidae	ANCESTRAL SPECIES	99														ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a.g	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT00940000165180.i	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a
painted turtle	MODERN SPECIES	1100														ATP2B3 (ENSCPBG00000014832) #21	CCNQ (ENSCPBG00000015958)	DUSP9 (ENSCPBG00000015962) #22	FLNA (ENSCPBG00000015968)	ENSCPBG00000015988	ENSCPBG00000015995	DNASE1L1 (ENSCPBG00000015997)	TAFAZZIN (ENSCPBG00000016003)	ATP6AP1 (ENSCPBG00000016015)	GDI1 (ENSCPBG00000016047)	ENSCPBG00000017165	ENSCPBG00000017169	ENSCPBG00000017177	ENSCPBG00000017179	FAM3A (ENSCPBG00000017182)	UBL4A (ENSCPBG00000017185)	ENSCPBG00000017187	ENSCPBG00000017191
Three-toed box turtle	MODERN SPECIES	259																DUSP9 (ENSTMTG00000011433) #22
Anura	ANCESTRAL SPECIES	249											ENSGT00950000182846.a.b	ENSGT00940000164248	ENSGT00940000155311.C #20	ENSGT00940000160765 #21	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869 #24	ENSGT00390000011863.c #25	ENSGT00950000182955.a.b.a #26	ENSGT01020000230394.e.a.a.b.a.b #27
Leishan spiny toad	MODERN SPECIES	12	ENSLLEG00000016072 #18	ENSLLEG00000015985 #19	ENSLLEG00000015931 #18	ENSLLEG00000015885	ALAS2 (ENSLLEG00000015720)	APEX2 (ENSLLEG00000015467)	PFKFB1 (ENSLLEG00000015025)	ENSLLEG00000014898	ENSLLEG00000014743	ENSLLEG00000014665	ENSLLEG00000014514	BGN (ENSLLEG00000014316) #20	ENSLLEG00000014240	ATP2B3 (ENSLLEG00000030285) #21	CCNQ (ENSLLEG00000030219)	DUSP9 (ENSLLEG00000030195) #22	ENSLLEG00000030187	PNCK (ENSLLEG00000030165) #23	ENSLLEG00000030075 #24	BCAP31 (ENSLLEG00000029981) #25	ABCD1 (ENSLLEG00000029377) #26	PLXNB3 (ENSLLEG00000028671) #27	ST6GALNAC4 (ENSLLEG00000028566)	ENSLLEG00000028550	PHF8 (ENSLLEG00000028501)	ENSLLEG00000028484	FAM120C (ENSLLEG00000028450)	WNK3 (ENSLLEG00000028345)	TSR2 (ENSLLEG00000028315)	SRPK3 (ENSLLEG00000028215) #28	IDH3G (ENSLLEG00000027844) #29
Frog	MODERN SPECIES	8	bbln (ENSXETG00000035874)	ptges2 (ENSXETG00000012893)	sh3glb2 (ENSXETG00000012895)	nup188 (ENSXETG00000012903)	dolk (ENSXETG00000024754)	phyhd1 (ENSXETG00000012919)	lrrc8a (ENSXETG00000012899)	kyat1 (ENSXETG00000012909)	golga2 (ENSXETG00000012915)	dnase1 (ENSXETG00000012928)	ENSXETG00000046713	ecm2.2 (ENSXETG00000012932)	bgn (ENSXETG00000012934) #20	atp2b3 (ENSXETG00000030920) #21	ccnq (ENSXETG00000007696)	idh3b (ENSXETG00000007698) #22	gnl3l (ENSXETG00000007700)	pnck (ENSXETG00000007699) #23	slc6a8 (ENSXETG00000007703) #24	bcap31 (ENSXETG00000024749) #25	abcd1 (ENSXETG00000007705) #26	plxnb3 (ENSXETG00000007706) #27	smc1a (ENSXETG00000024747)	wnt7c (ENSXETG00000007719)	syp (ENSXETG00000007721)	prickle3 (ENSXETG00000030869)	plp2 (ENSXETG00000043070)	gpkow (ENSXETG00000007727)	naif1 (ENSXETG00000007730)	slc25a25 (ENSXETG00000007731)	col27a1 (ENSXETG00000021972)
Coelacanth	MODERN SPECIES	76																ENSLACG00000000437 #22