Euteleostomi	ANCESTRAL SPECIES	629													ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937
Sarcopterygii	ANCESTRAL SPECIES	265							ENSGT00940000161969	ENSGT00940000154471.a.a	ENSGT00940000164911	ENSGT00390000013740	ENSGT00950000182846.a.b	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937	ENSGT00940000153588.b	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a
Tetrapoda	ANCESTRAL SPECIES	86	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00390000016224	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00950000182846.a.b	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937	ENSGT00390000012715	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162980	ENSGT00390000003348	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000155170
Amniota	ANCESTRAL SPECIES	40	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00390000003348	ENSGT00940000162980	ENSGT00940000164454	ENSGT00950000182835.c.c	ENSGT00530000063540.a	ENSGT00940000159912	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196
Mammalia	ANCESTRAL SPECIES	46	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000162980	ENSGT00940000164454	ENSGT00950000182835.c.c	ENSGT00530000063540.a	ENSGT00940000159912	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000183006.A.a.b	ENSGT00950000182824.a.b.b	ENSGT00390000016224.j.a	ENSGT00550000074803
Theria	ANCESTRAL SPECIES	46										ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00390000016224.j.a	ENSGT00550000074803	ENSGT00390000013740
Eutheria	ANCESTRAL SPECIES	16										ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Glires	ANCESTRAL SPECIES	10	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Lagomorpha	ANCESTRAL SPECIES	103											ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272
Pika	MODERN SPECIES	8486																DUSP9 (ENSOPRG00000012013) #22
Rabbit	MODERN SPECIES	549											TREX2 (ENSOCUG00000025054)	ENSOCUG00000002376	BGN (ENSOCUG00000023931)	ATP2B3 (ENSOCUG00000029623)	CCNQ (ENSOCUG00000002393)	DUSP9 (ENSOCUG00000021158) #22	PNCK (ENSOCUG00000002399)	BCAP31 (ENSOCUG00000017921)	PLXNB3 (ENSOCUG00000016506)	ABCD1 (ENSOCUG00000017922)	IDH3G (ENSOCUG00000016554)	SSR4 (ENSOCUG00000027360)	ENSOCUG00000026260	PDZD4 (ENSOCUG00000017200)	L1CAM (ENSOCUG00000001102)	AVPR2 (ENSOCUG00000015695)	ARHGAP4 (ENSOCUG00000001107)	NAA10 (ENSOCUG00000001111)	RENBP (ENSOCUG00000025840)	HCFC1 (ENSOCUG00000001113)	TMEM187 (ENSOCUG00000001116)
Rodentia	ANCESTRAL SPECIES	10	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Muroidea	ANCESTRAL SPECIES	13	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00390000006832	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Cricetinae	ANCESTRAL SPECIES	46						ENSGT00390000000062.x.b.k.b	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00940000161383	ENSGT00940000160502
Golden Hamster	MODERN SPECIES	857									ENSMAUG00000019268	Gm18336 (ENSMAUG00000017654)	Zfp92 (ENSMAUG00000006204)	Trex2 (ENSMAUG00000006617)	Haus7 (ENSMAUG00000020073)	Bgn (ENSMAUG00000020050)	Atp2b3 (ENSMAUG00000009992)	Dusp9 (ENSMAUG00000020993) #22	Pnck (ENSMAUG00000017486)	Slc6a8 (ENSMAUG00000017007)	Bcap31 (ENSMAUG00000009135)	Abcd1 (ENSMAUG00000020103)	Plxnb3 (ENSMAUG00000005458)	Srpk3 (ENSMAUG00000009935)	Idh3g (ENSMAUG00000000657)	ENSMAUG00000015090	Pdzd4 (ENSMAUG00000000466)	L1cam (ENSMAUG00000008575)	Avpr2 (ENSMAUG00000001098)	Arhgap4 (ENSMAUG00000020011)	Naa10 (ENSMAUG00000019021)	Hcfc1 (ENSMAUG00000018495)	Irak1 (ENSMAUG00000002430)
Chinese hamster chok1gshd	MODERN SPECIES	16	Nsdhl (ENSCGRG00001015462)	Zfp185 (ENSCGRG00001021834)	ENSCGRG00001024731	ENSCGRG00001005230	ENSCGRG00001023020	F8a (ENSCGRG00001010823)	ENSCGRG00001011071	Gm45015 (ENSCGRG00001000704)	ENSCGRG00001020684	Gm18336 (ENSCGRG00001009753)	Zfp92 (ENSCGRG00001024615)	Trex2 (ENSCGRG00001012110)	Haus7 (ENSCGRG00001014259)	Bgn (ENSCGRG00001004273)	Atp2b3 (ENSCGRG00001013946)	Dusp9 (ENSCGRG00001015656) #22	Pnck (ENSCGRG00001015654)	Slc6a8 (ENSCGRG00001013941)	ENSCGRG00001022627	Abcd1 (ENSCGRG00001017773)	Plxnb3 (ENSCGRG00001024658)	Srpk3 (ENSCGRG00001005920)	Idh3g (ENSCGRG00001012756)	Ssr4 (ENSCGRG00001019369)	Pdzd4 (ENSCGRG00001012732)	L1cam (ENSCGRG00001020541)	Avpr2 (ENSCGRG00001010799)	Arhgap4 (ENSCGRG00001023232)	Naa10 (ENSCGRG00001012595)	Hcfc1 (ENSCGRG00001019535)	Irak1 (ENSCGRG00001013928)
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00940000161201	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v.i	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Prairie vole	MODERN SPECIES	212									ENSMOCG00000008885	Gm18336 (ENSMOCG00000000683)	Zfp92 (ENSMOCG00000015417)	Trex2 (ENSMOCG00000001305)	ENSMOCG00000016829	Bgn (ENSMOCG00000005439)	Atp2b3 (ENSMOCG00000016837)	Dusp9 (ENSMOCG00000014149) #22	Pnck (ENSMOCG00000005305)	Slc6a8 (ENSMOCG00000013922)	Bcap31 (ENSMOCG00000011355)	Abcd1 (ENSMOCG00000020381)	Plxnb3 (ENSMOCG00000016754)	Srpk3 (ENSMOCG00000000270)	Idh3g (ENSMOCG00000013265)	Ssr4 (ENSMOCG00000000481)	Pdzd4 (ENSMOCG00000013342)	L1cam (ENSMOCG00000018901)	Avpr2 (ENSMOCG00000012257)	Arhgap4 (ENSMOCG00000010795)	Naa10 (ENSMOCG00000011968)	Renbp (ENSMOCG00000021137)	Hcfc1 (ENSMOCG00000018390)
Northern American deer mouse	MODERN SPECIES	475	Gabrq (ENSPEMG00000024127)	Cetn2 (ENSPEMG00000009693)	Nsdhl (ENSPEMG00000028251)	ENSPEMG00000016866	Zfp185 (ENSPEMG00000001172)	Pnma5 (ENSPEMG00000029060)	ENSPEMG00000029415	ENSPEMG00000014112	Zfp275 (ENSPEMG00000028598)	ENSPEMG00000002119	Zfp92 (ENSPEMG00000029357)	Trex2 (ENSPEMG00000004918)	Haus7 (ENSPEMG00000011467)	Bgn (ENSPEMG00000017164)	Atp2b3 (ENSPEMG00000001607)	Dusp9 (ENSPEMG00000009249) #22	Pnck (ENSPEMG00000018929)	ENSPEMG00000001387	Bcap31 (ENSPEMG00000018100)	Abcd1 (ENSPEMG00000010748)	Plxnb3 (ENSPEMG00000019022)	Srpk3 (ENSPEMG00000012149)	Idh3g (ENSPEMG00000011232)	Ssr4 (ENSPEMG00000008760)	Pdzd4 (ENSPEMG00000008494)	L1cam (ENSPEMG00000011592)	Avpr2 (ENSPEMG00000008325)	Arhgap4 (ENSPEMG00000019112)	ENSPEMG00000010870	Hcfc1 (ENSPEMG00000011837)	Irak1 (ENSPEMG00000001469)
Murinae	ANCESTRAL SPECIES	14	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Mus	ANCESTRAL SPECIES	9	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Mus_B	ANCESTRAL SPECIES	14	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
spretus	MODERN SPECIES	19	Magea10 (MGP_SPRETEiJ_G0034293)	Gabra3 (MGP_SPRETEiJ_G0034294)	Gabrq (MGP_SPRETEiJ_G0034295)	Cetn2 (MGP_SPRETEiJ_G0034296)	Nsdhl (MGP_SPRETEiJ_G0034297)	Zfp185 (MGP_SPRETEiJ_G0034298)	Pnma5 (MGP_SPRETEiJ_G0034299)	Pnma3 (MGP_SPRETEiJ_G0034300)	F8a (MGP_SPRETEiJ_G0034301)	Zfp275 (MGP_SPRETEiJ_G0034302)	Zfp92 (MGP_SPRETEiJ_G0034303)	Trex2 (MGP_SPRETEiJ_G0034304)	Haus7 (MGP_SPRETEiJ_G0034305)	Bgn (MGP_SPRETEiJ_G0034306)	Atp2b3 (MGP_SPRETEiJ_G0034307)	Dusp9 (MGP_SPRETEiJ_G0034308) #22	Pnck (MGP_SPRETEiJ_G0034309)	Slc6a8 (MGP_SPRETEiJ_G0034310)	Bcap31 (MGP_SPRETEiJ_G0034311)	Abcd1 (MGP_SPRETEiJ_G0034312)	Plxnb3 (MGP_SPRETEiJ_G0034313)	Srpk3 (MGP_SPRETEiJ_G0034314)	Idh3g (MGP_SPRETEiJ_G0034315)	Ssr4 (MGP_SPRETEiJ_G0034316)	Pdzd4 (MGP_SPRETEiJ_G0034317)	L1cam (MGP_SPRETEiJ_G0034318)	Arhgap4 (MGP_SPRETEiJ_G0034319)	Avpr2 (MGP_SPRETEiJ_G0034320)	Naa10 (MGP_SPRETEiJ_G0034321)	Renbp (MGP_SPRETEiJ_G0034322)	Hcfc1 (MGP_SPRETEiJ_G0034323)
Steppe mouse	MODERN SPECIES	886																Dusp9 (ENSMSIG00000007104) #22
Mouse	MODERN SPECIES	37	Spin2d (ENSMUSG00000079566)	Xlr3b (ENSMUSG00000073125)	Xlr4b (ENSMUSG00000067768)	F8a (ENSMUSG00000078317)	Xlr4c (ENSMUSG00000031362)	Xlr3c (ENSMUSG00000058147)	Xlr5c (ENSMUSG00000067764)	Gm45015 (ENSMUSG00000109368)	Zfp275 (ENSMUSG00000031365)	Gm18336 (ENSMUSG00000096966)	Zfp92 (ENSMUSG00000031374)	Trex2 (ENSMUSG00000031372)	Haus7 (ENSMUSG00000031371)	Bgn (ENSMUSG00000031375)	Atp2b3 (ENSMUSG00000031376)	Dusp9 (ENSMUSG00000031383) #22	Pnck (ENSMUSG00000002012)	Slc6a8 (ENSMUSG00000019558)	Bcap31 (ENSMUSG00000002015)	Abcd1 (ENSMUSG00000031378)	Plxnb3 (ENSMUSG00000031385)	Srpk3 (ENSMUSG00000002007)	Idh3g (ENSMUSG00000002010)	Ssr4 (ENSMUSG00000002014)	Pdzd4 (ENSMUSG00000002006)	L1cam (ENSMUSG00000031391)	Arhgap4 (ENSMUSG00000031389)	Avpr2 (ENSMUSG00000031390)	Naa10 (ENSMUSG00000031388)	Renbp (ENSMUSG00000031387)	Hcfc1 (ENSMUSG00000031386)
Ryukyu mouse	MODERN SPECIES	19	Magea4 (MGP_CAROLIEiJ_G0033138)	Gabre (MGP_CAROLIEiJ_G0033139)	Magea10 (MGP_CAROLIEiJ_G0033140)	Gabra3 (MGP_CAROLIEiJ_G0033141)	Gabrq (MGP_CAROLIEiJ_G0033142)	Cetn2 (MGP_CAROLIEiJ_G0033143)	Nsdhl (MGP_CAROLIEiJ_G0033144)	Zfp185 (MGP_CAROLIEiJ_G0033145)	Pnma5 (MGP_CAROLIEiJ_G0033146)	Zfp275 (MGP_CAROLIEiJ_G0033147)	Zfp92 (MGP_CAROLIEiJ_G0033148)	Trex2 (MGP_CAROLIEiJ_G0033149)	Haus7 (MGP_CAROLIEiJ_G0033150)	Bgn (MGP_CAROLIEiJ_G0033151)	Atp2b3 (MGP_CAROLIEiJ_G0033152)	Dusp9 (MGP_CAROLIEiJ_G0033153) #22	Pnck (MGP_CAROLIEiJ_G0033154)	Slc6a8 (MGP_CAROLIEiJ_G0033155)	Bcap31 (MGP_CAROLIEiJ_G0033156)	Abcd1 (MGP_CAROLIEiJ_G0033157)	Plxnb3 (MGP_CAROLIEiJ_G0033158)	Srpk3 (MGP_CAROLIEiJ_G0033159)	Idh3g (MGP_CAROLIEiJ_G0033160)	Ssr4 (MGP_CAROLIEiJ_G0033161)	Pdzd4 (MGP_CAROLIEiJ_G0033162)	L1cam (MGP_CAROLIEiJ_G0033163)	Arhgap4 (MGP_CAROLIEiJ_G0033164)	Avpr2 (MGP_CAROLIEiJ_G0033165)	Naa10 (MGP_CAROLIEiJ_G0033166)	Renbp (MGP_CAROLIEiJ_G0033167)	Hcfc1 (MGP_CAROLIEiJ_G0033168)
Shrew mouse	MODERN SPECIES	23	Magea10 (MGP_PahariEiJ_G0031681)	Gabra3 (MGP_PahariEiJ_G0031682)	Gabrq (MGP_PahariEiJ_G0031683)	Cetn2 (MGP_PahariEiJ_G0031684)	Nsdhl (MGP_PahariEiJ_G0031685)	Zfp185 (MGP_PahariEiJ_G0031686)	MGP_PahariEiJ_G0031687	MGP_PahariEiJ_G0031688	MGP_PahariEiJ_G0031689	Zfp275 (MGP_PahariEiJ_G0031690)	MGP_PahariEiJ_G0031691	Trex2 (MGP_PahariEiJ_G0031692)	Haus7 (MGP_PahariEiJ_G0031693)	Bgn (MGP_PahariEiJ_G0031694)	Atp2b3 (MGP_PahariEiJ_G0031695)	Dusp9 (MGP_PahariEiJ_G0031696) #22	Pnck (MGP_PahariEiJ_G0031697)	Slc6a8 (MGP_PahariEiJ_G0031698)	Bcap31 (MGP_PahariEiJ_G0031699)	Abcd1 (MGP_PahariEiJ_G0031700)	Plxnb3 (MGP_PahariEiJ_G0031701)	Srpk3 (MGP_PahariEiJ_G0031702)	Idh3g (MGP_PahariEiJ_G0031703)	Ssr4 (MGP_PahariEiJ_G0031704)	Pdzd4 (MGP_PahariEiJ_G0031705)	L1cam (MGP_PahariEiJ_G0031706)	Arhgap4 (MGP_PahariEiJ_G0031707)	Avpr2 (MGP_PahariEiJ_G0031708)	Naa10 (MGP_PahariEiJ_G0031709)	Renbp (MGP_PahariEiJ_G0031710)	Hcfc1 (MGP_PahariEiJ_G0031711)
Rat	MODERN SPECIES	46	F8a1 (ENSRNOG00000070033)	LOC103690322 (ENSRNOG00000055822)	LOC100911047 (ENSRNOG00000068104)	Xlr3a (ENSRNOG00000064693)	LOC100911002 (ENSRNOG00000050177)	Pwwp4 (ENSRNOG00000068777)	ENSRNOG00000069789	Zfp275 (ENSRNOG00000061073)	RGD1559982 (ENSRNOG00000070467)	Zfp92 (ENSRNOG00000051836)	Trex2 (ENSRNOG00000056983)	Haus7 (ENSRNOG00000055648)	Bgn (ENSRNOG00000055962)	Atp2b3 (ENSRNOG00000061304)	AABR07071935.1 (ENSRNOG00000061441)	Dusp9 (ENSRNOG00000055185) #22	Pnck (ENSRNOG00000058317)	Slc6a8 (ENSRNOG00000057620)	Bcap31 (ENSRNOG00000055756)	Abcd1 (ENSRNOG00000056524)	Plxnb3 (ENSRNOG00000061731)	Srpk3 (ENSRNOG00000054548)	Idh3g (ENSRNOG00000055572)	Ssr4 (ENSRNOG00000053172)	Pdzd4 (ENSRNOG00000056174)	L1cam (ENSRNOG00000061230)	Arhgap4 (ENSRNOG00000058545)	Avpr2 (ENSRNOG00000059862)	Naa10 (ENSRNOG00000060063)	Renbp (ENSRNOG00000054765)	Hcfc1 (ENSRNOG00000051948)
Upper Galilee mountains blind mole rat	MODERN SPECIES	660	Magea10 (ENSNGAG00000018067)	Gabra3 (ENSNGAG00000004762)	Gabrq (ENSNGAG00000023448)	Cetn2 (ENSNGAG00000013931)	Nsdhl (ENSNGAG00000013199)	Zfp185 (ENSNGAG00000007010)	Pnma3 (ENSNGAG00000021577)	Zfp275 (ENSNGAG00000023803)	Gm18336 (ENSNGAG00000010715)	Zfp92 (ENSNGAG00000014044)	Trex2 (ENSNGAG00000022556)	Haus7 (ENSNGAG00000004509)	Bgn (ENSNGAG00000020236)	Atp2b3 (ENSNGAG00000023103)	ENSNGAG00000022572	Dusp9 (ENSNGAG00000022463) #22	Pnck (ENSNGAG00000024203)	Slc6a8 (ENSNGAG00000012992)	Bcap31 (ENSNGAG00000005195)	Abcd1 (ENSNGAG00000023420)	Plxnb3 (ENSNGAG00000023368)	Srpk3 (ENSNGAG00000021121)	Idh3g (ENSNGAG00000017889)	ENSNGAG00000015787	Pdzd4 (ENSNGAG00000009443)	L1cam (ENSNGAG00000013550)	Avpr2 (ENSNGAG00000009849)	Arhgap4 (ENSNGAG00000015413)	Naa10 (ENSNGAG00000020303)	Renbp (ENSNGAG00000021686)	Hcfc1 (ENSNGAG00000013083)
Lesser Egyptian jerboa	MODERN SPECIES	224							Pnma5 (ENSJJAG00000022106)	ENSJJAG00000023268	Zfp275 (ENSJJAG00000023544)	ENSJJAG00000023776	Zfp92 (ENSJJAG00000024019)	Trex2 (ENSJJAG00000012484)	Haus7 (ENSJJAG00000011304)	Bgn (ENSJJAG00000014050)	Atp2b3 (ENSJJAG00000014975)	Dusp9 (ENSJJAG00000018570) #22	Pnck (ENSJJAG00000020546)	Slc6a8 (ENSJJAG00000022046)	Bcap31 (ENSJJAG00000011510)	Abcd1 (ENSJJAG00000012430)	Plxnb3 (ENSJJAG00000017006)	Srpk3 (ENSJJAG00000019785)	Idh3g (ENSJJAG00000015962)	Ssr4 (ENSJJAG00000017842)	Pdzd4 (ENSJJAG00000018534)	L1cam (ENSJJAG00000021077)	Avpr2 (ENSJJAG00000018314)	Arhgap4 (ENSJJAG00000021798)	Naa10 (ENSJJAG00000023398)	Renbp (ENSJJAG00000010739)	Hcfc1 (ENSJJAG00000012815)
Kangaroo rat	MODERN SPECIES	526									ENSDORG00000029018	Zfp92 (ENSDORG00000001936)	Trex2 (ENSDORG00000023727)	Haus7 (ENSDORG00000001235)	ENSDORG00000001237	Atp2b3 (ENSDORG00000013038)	ENSDORG00000012846	Dusp9 (ENSDORG00000024222) #22	Pnck (ENSDORG00000014186)	Slc6a8 (ENSDORG00000001174)	Bcap31 (ENSDORG00000006022)	Abcd1 (ENSDORG00000006023)	Plxnb3 (ENSDORG00000006024)	Srpk3 (ENSDORG00000006026)	Idh3g (ENSDORG00000006029)	Ssr4 (ENSDORG00000006030)	Pdzd4 (ENSDORG00000028112)	L1cam (ENSDORG00000014093)	Avpr2 (ENSDORG00000002747)	Arhgap4 (ENSDORG00000002750)	Naa10 (ENSDORG00000002753)	Renbp (ENSDORG00000002755)	Hcfc1 (ENSDORG00000002756)
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935.eb.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935.eb.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Hystricomorpha_b	ANCESTRAL SPECIES	84	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935.eb.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Degu	MODERN SPECIES	259		ENSODEG00000002731	ENSODEG00000002721	CCSER1 (ENSODEG00000002701)	ENSODEG00000003691	GABRQ (ENSODEG00000003646)	ENSODEG00000003612	NSDHL (ENSODEG00000003563)	ENSODEG00000003535	ZFP92 (ENSODEG00000003508)	TREX2 (ENSODEG00000019142)	HAUS7 (ENSODEG00000003475)	BGN (ENSODEG00000003451)	ATP2B3 (ENSODEG00000003358)	CCNQ (ENSODEG00000003285)	DUSP9 (ENSODEG00000003261) #22	PNCK (ENSODEG00000003252)	ENSODEG00000003207	BCAP31 (ENSODEG00000003174)	ABCD1 (ENSODEG00000003127)	PLXNB3 (ENSODEG00000002965)	SRPK3 (ENSODEG00000002869)	IDH3G (ENSODEG00000002774)	SSR4 (ENSODEG00000002732)	PDZD4 (ENSODEG00000005482)	L1CAM (ENSODEG00000005259)	ENSODEG00000005204	AVPR2 (ENSODEG00000005166)	ARHGAP4 (ENSODEG00000005124)	ENSODEG00000005100	RENBP (ENSODEG00000005065)
Long-tailed chinchilla	MODERN SPECIES	287									ENSCLAG00000002477	ZFP92 (ENSCLAG00000002658)	TREX2 (ENSCLAG00000002698)	HAUS7 (ENSCLAG00000002789)	BGN (ENSCLAG00000003040)	ATP2B3 (ENSCLAG00000006386)	CCNQ (ENSCLAG00000008202)	DUSP9 (ENSCLAG00000008316) #22	PNCK (ENSCLAG00000002167)	ENSCLAG00000002550	BCAP31 (ENSCLAG00000002843)	ABCD1 (ENSCLAG00000001650)	PLXNB3 (ENSCLAG00000001828)	SRPK3 (ENSCLAG00000001932)	IDH3G (ENSCLAG00000002456)	SSR4 (ENSCLAG00000002670)	PDZD4 (ENSCLAG00000002707)	L1CAM (ENSCLAG00000001453)	AVPR2 (ENSCLAG00000002650)	ENSCLAG00000001334	NAA10 (ENSCLAG00000001427)	RENBP (ENSCLAG00000003810)	HCFC1 (ENSCLAG00000004175)
Guinea pig	MODERN SPECIES	148							ENSCPOG00000037160	ENSCPOG00000011291	ENSCPOG00000020829	ZFP92 (ENSCPOG00000006654)	TREX2 (ENSCPOG00000025702)	HAUS7 (ENSCPOG00000007497)	BGN (ENSCPOG00000023628)	ATP2B3 (ENSCPOG00000005102)	CCNQ (ENSCPOG00000009250)	DUSP9 (ENSCPOG00000000114) #22	ENSCPOG00000011710	BCAP31 (ENSCPOG00000008510)	ABCD1 (ENSCPOG00000011702)	PLXNB3 (ENSCPOG00000006868)	SRPK3 (ENSCPOG00000006881)	IDH3G (ENSCPOG00000006890)	SSR4 (ENSCPOG00000006898)	PDZD4 (ENSCPOG00000019482)	L1CAM (ENSCPOG00000005519)	AVPR2 (ENSCPOG00000012697)	ENSCPOG00000026143	NAA10 (ENSCPOG00000011495)	ENSCPOG00000024784	IRAK1 (ENSCPOG00000039151)	MECP2 (ENSCPOG00000012579)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000033617	ENSHGLG00000045983	ENSHGLG00000047243	ENSHGLG00000045027	ENSHGLG00000000219	ENSHGLG00000035866	ENSHGLG00000032270	ENSHGLG00000046068	ENSHGLG00000045727	ENSHGLG00000035589	TREX2 (ENSHGLG00000008010)	HAUS7 (ENSHGLG00000002908)	BGN (ENSHGLG00000004010)	ATP2B3 (ENSHGLG00000000642)	CCNQ (ENSHGLG00000003517)	DUSP9 (ENSHGLG00000004236) #22	PNCK (ENSHGLG00000006098)	ENSHGLG00000037294	BCAP31 (ENSHGLG00000000710)	ABCD1 (ENSHGLG00000001000)	PLXNB3 (ENSHGLG00000002203)	IDH3G (ENSHGLG00000000443)	SSR4 (ENSHGLG00000001720)	PDZD4 (ENSHGLG00000001939)	L1CAM (ENSHGLG00000003403)	AVPR2 (ENSHGLG00000006784)	ARHGAP4 (ENSHGLG00000000857)	NAA10 (ENSHGLG00000002773)	RENBP (ENSHGLG00000009835)	HCFC1 (ENSHGLG00000001143)	IRAK1 (ENSHGLG00000002116)
Sciuridae	ANCESTRAL SPECIES	27	ENSGT00940000162167	ENSGT00940000155935.cb	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Eurasian red squirrel	MODERN SPECIES	156	NSDHL (ENSSVLG00005022122)	ZNF185 (ENSSVLG00005022073)	PNMA5 (ENSSVLG00005022038)	ENSSVLG00005021967	PNMA3 (ENSSVLG00005021940)	ENSSVLG00005021915	ENSSVLG00005021891	ENSSVLG00005021871	ENSSVLG00005021782	ENSSVLG00005021735	ZFP92 (ENSSVLG00005021718)	HAUS7 (ENSSVLG00005021619)	BGN (ENSSVLG00005021572)	ATP2B3 (ENSSVLG00005020846)	CCNQ (ENSSVLG00005020662)	DUSP9 (ENSSVLG00005020621) #22	PNCK (ENSSVLG00005020384)	ENSSVLG00005020284	BCAP31 (ENSSVLG00005020208)	ABCD1 (ENSSVLG00005020163)	ENSSVLG00005020066	SRPK3 (ENSSVLG00005020004)	IDH3G (ENSSVLG00005019902)	SSR4 (ENSSVLG00005019816)	PDZD4 (ENSSVLG00005019686)	AVPR2 (ENSSVLG00005019578)	ENSSVLG00005019536	ARHGAP4 (ENSSVLG00005019458)	NAA10 (ENSSVLG00005019123)	RENBP (ENSSVLG00005019023)	HCFC1 (ENSSVLG00005018524)
Marmotini	ANCESTRAL SPECIES	83								ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Alpin marmot	MODERN SPECIES	541																ENSMMMG00000001424 #22
Marmotini_b	ANCESTRAL SPECIES	124								ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Arctic ground squirrel	MODERN SPECIES	562								ZNF275 (ENSUPAG00010012750)	ENSUPAG00010012742	ZFP92 (ENSUPAG00010012725)	TREX2 (ENSUPAG00010012721)	HAUS7 (ENSUPAG00010012697)	BGN (ENSUPAG00010012684)	ATP2B3 (ENSUPAG00010012590)	CCNQ (ENSUPAG00010012574)	DUSP9 (ENSUPAG00010012557) #22	PNCK (ENSUPAG00010012527)	ENSUPAG00010012523	ABCD1 (ENSUPAG00010012506)	ENSUPAG00010012496	ENSUPAG00010012465	SRPK3 (ENSUPAG00010012441)	IDH3G (ENSUPAG00010012400)	SSR4 (ENSUPAG00010012375)	PDZD4 (ENSUPAG00010012358)	L1CAM (ENSUPAG00010012204)	AVPR2 (ENSUPAG00010012191)	ARHGAP4 (ENSUPAG00010012018)	NAA10 (ENSUPAG00010011976)	RENBP (ENSUPAG00010011941)	HCFC1 (ENSUPAG00010011877)
Squirrel	MODERN SPECIES	409						ENSSTOG00000032558	ZNF275 (ENSSTOG00000022633)	ENSSTOG00000033034	ENSSTOG00000029369	ZFP92 (ENSSTOG00000009126)	TREX2 (ENSSTOG00000027213)	HAUS7 (ENSSTOG00000022988)	BGN (ENSSTOG00000008058)	ATP2B3 (ENSSTOG00000008068)	CCNQ (ENSSTOG00000008103)	DUSP9 (ENSSTOG00000008115) #22	PNCK (ENSSTOG00000008119)	ENSSTOG00000026886	BCAP31 (ENSSTOG00000008138)	ABCD1 (ENSSTOG00000008153)	ENSSTOG00000008188	PLXNB3 (ENSSTOG00000008197)	SRPK3 (ENSSTOG00000008233)	IDH3G (ENSSTOG00000008261)	SSR4 (ENSSTOG00000008278)	PDZD4 (ENSSTOG00000021423)	L1CAM (ENSSTOG00000008316)	AVPR2 (ENSSTOG00000008352)	ARHGAP4 (ENSSTOG00000022503)	NAA10 (ENSSTOG00000010237)	RENBP (ENSSTOG00000010247)
Primates	ANCESTRAL SPECIES	23	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Simiiformes	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Catarrhini	ANCESTRAL SPECIES	12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000164672	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00940000162921	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Gorilla	MODERN SPECIES	523	ZNF185 (ENSGGOG00000017066)	PNMA5 (ENSGGOG00000000643)	PNMA3 (ENSGGOG00000034909)	ENSGGOG00000043525	ENSGGOG00000036462	MAGEA1 (ENSGGOG00000010904)	PNMA6F (ENSGGOG00000039046)	ENSGGOG00000010898	ENSGGOG00000038628	ZFP92 (ENSGGOG00000039989)	TREX2 (ENSGGOG00000036312)	HAUS7 (ENSGGOG00000007959)	BGN (ENSGGOG00000007211)	ATP2B3 (ENSGGOG00000007217)	ENSGGOG00000027073	DUSP9 (ENSGGOG00000015273) #22	ENSGGOG00000039596	PNCK (ENSGGOG00000005546)	ENSGGOG00000041742	ENSGGOG00000005559	ABCD1 (ENSGGOG00000005561)	PLXNB3 (ENSGGOG00000027723)	SRPK3 (ENSGGOG00000036424)	IDH3G (ENSGGOG00000023796)	SSR4 (ENSGGOG00000024329)	PDZD4 (ENSGGOG00000007937)	AVPR2 (ENSGGOG00000027387)	ARHGAP4 (ENSGGOG00000009770)	NAA10 (ENSGGOG00000009788)	RENBP (ENSGGOG00000009791)	HCFC1 (ENSGGOG00000009800)
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Human	MODERN SPECIES	1827	ZNF185 (ENSG00000147394)	PNMA5 (ENSG00000198883)	PNMA3 (ENSG00000183837)	PNMA6A (ENSG00000235961)	MAGEA1 (ENSG00000198681)	PWWP4 (ENSG00000278803)	PNMA6F (ENSG00000225110)	ZNF275 (ENSG00000063587)	PNMA6E (ENSG00000214897)	ZFP92 (ENSG00000189420)	TREX2 (ENSG00000183479)	HAUS7 (ENSG00000213397)	BGN (ENSG00000182492)	ATP2B3 (ENSG00000067842)	CCNQ (ENSG00000262919)	DUSP9 (ENSG00000130829) #22	PNCK (ENSG00000130822)	SLC6A8 (ENSG00000130821)	BCAP31 (ENSG00000185825)	ABCD1 (ENSG00000101986)	PLXNB3 (ENSG00000198753)	SRPK3 (ENSG00000184343)	IDH3G (ENSG00000067829)	SSR4 (ENSG00000180879)	PDZD4 (ENSG00000067840)	L1CAM (ENSG00000198910)	AVPR2 (ENSG00000126895)	ARHGAP4 (ENSG00000089820)	NAA10 (ENSG00000102030)	RENBP (ENSG00000102032)	HCFC1 (ENSG00000172534)
Pan	ANCESTRAL SPECIES	6	ENSGT00940000164672	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	259																ENSPTRG00000045215 #22	ENSPTRG00000048716	ENSPTRG00000047427
Chimpanzee	MODERN SPECIES	972	ENSPTRG00000044072	NSDHL (ENSPTRG00000022390)	ZNF185 (ENSPTRG00000022391)	PNMA5 (ENSPTRG00000028170)	PNMA3 (ENSPTRG00000029325)	ENSPTRG00000048952	ENSPTRG00000044850	MAGEA1 (ENSPTRG00000022386)	PNMA6F (ENSPTRG00000049868)	ZNF275 (ENSPTRG00000022394)	ZFP92 (ENSPTRG00000047228)	HAUS7 (ENSPTRG00000022397)	BGN (ENSPTRG00000022541)	ATP2B3 (ENSPTRG00000022399)	CCNQ (ENSPTRG00000043565)	ENSPTRG00000050474 #22	ENSPTRG00000043668	PNCK (ENSPTRG00000022404)	ENSPTRG00000050829	BCAP31 (ENSPTRG00000046838)	ABCD1 (ENSPTRG00000051738)	PLXNB3 (ENSPTRG00000052414)	SRPK3 (ENSPTRG00000022410)	IDH3G (ENSPTRG00000024398)	SSR4 (ENSPTRG00000022412)	PDZD4 (ENSPTRG00000022413)	ENSPTRG00000045057	L1CAM (ENSPTRG00000022416)	ENSPTRG00000039921	AVPR2 (ENSPTRG00000033849)	ARHGAP4 (ENSPTRG00000033931)
Bonobo	MODERN SPECIES	369	MAGEA10 (ENSPPAG00000004915)	GABRA3 (ENSPPAG00000031555)	GABRQ (ENSPPAG00000032226)	CETN2 (ENSPPAG00000038780)	NSDHL (ENSPPAG00000039481)	ZNF185 (ENSPPAG00000039048)	PNMA5 (ENSPPAG00000009176)	PNMA3 (ENSPPAG00000033493)	ENSPPAG00000043033	ENSPPAG00000016764	ZFP92 (ENSPPAG00000027875)	HAUS7 (ENSPPAG00000034336)	BGN (ENSPPAG00000033259)	ATP2B3 (ENSPPAG00000028306)	ENSPPAG00000027886	DUSP9 (ENSPPAG00000043656) #22	ENSPPAG00000029417	PNCK (ENSPPAG00000030824)	SLC6A8 (ENSPPAG00000035106)	BCAP31 (ENSPPAG00000033741)	ABCD1 (ENSPPAG00000038979)	PLXNB3 (ENSPPAG00000029812)	SRPK3 (ENSPPAG00000030197)	IDH3G (ENSPPAG00000041999)	SSR4 (ENSPPAG00000041018)	PDZD4 (ENSPPAG00000038351)	ENSPPAG00000001011	L1CAM (ENSPPAG00000042079)	AVPR2 (ENSPPAG00000034862)	ARHGAP4 (ENSPPAG00000039545)	ENSPPAG00000037021
Orangutan	MODERN SPECIES	242	CETN2 (ENSPPYG00000020833)	NSDHL (ENSPPYG00000020834)	ZNF185 (ENSPPYG00000029371)	PNMA5 (ENSPPYG00000032957)	PNMA3 (ENSPPYG00000020835)	PNMA6A (ENSPPYG00000020836)	MAGEA1 (ENSPPYG00000020837)	PNMA6F (ENSPPYG00000020840)	ZNF275 (ENSPPYG00000020839)	ENSPPYG00000033472	ENSPPYG00000020841	HAUS7 (ENSPPYG00000020843)	BGN (ENSPPYG00000020844)	ATP2B3 (ENSPPYG00000020845)	CCNQ (ENSPPYG00000020846)	DUSP9 (ENSPPYG00000020847) #22	ENSPPYG00000031169	ENSPPYG00000020848	SLC6A8 (ENSPPYG00000037616)	BCAP31 (ENSPPYG00000020850)	ABCD1 (ENSPPYG00000020852)	SRPK3 (ENSPPYG00000020854)	IDH3G (ENSPPYG00000020855)	SSR4 (ENSPPYG00000020856)	PDZD4 (ENSPPYG00000020857)	ENSPPYG00000031511	L1CAM (ENSPPYG00000020858)	ENSPPYG00000020859	ARHGAP4 (ENSPPYG00000020860)	NAA10 (ENSPPYG00000020861)	RENBP (ENSPPYG00000020862)
Gibbon	MODERN SPECIES	449	ENSNLEG00000030965	ENSNLEG00000033117	CETN2 (ENSNLEG00000033913)	NSDHL (ENSNLEG00000013866)	ZNF185 (ENSNLEG00000013907)	PNMA3 (ENSNLEG00000018300)	ENSNLEG00000014065	ENSNLEG00000031614	ENSNLEG00000027745	ZFP92 (ENSNLEG00000013228)	ENSNLEG00000013237	ENSNLEG00000031253	BGN (ENSNLEG00000013250)	ATP2B3 (ENSNLEG00000032741)	CCNQ (ENSNLEG00000013298)	DUSP9 (ENSNLEG00000013321) #22	ENSNLEG00000027939	PNCK (ENSNLEG00000013336)	BCAP31 (ENSNLEG00000013380)	ABCD1 (ENSNLEG00000013458)	PLXNB3 (ENSNLEG00000013475)	ENSNLEG00000013518	IDH3G (ENSNLEG00000013540)	SSR4 (ENSNLEG00000013602)	PDZD4 (ENSNLEG00000013626)	ENSNLEG00000034251	L1CAM (ENSNLEG00000013647)	ENSNLEG00000031864	AVPR2 (ENSNLEG00000013671)	ARHGAP4 (ENSNLEG00000013678)	NAA10 (ENSNLEG00000013724)
Cercopithecidae	ANCESTRAL SPECIES	19	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Rhinopithecus	ANCESTRAL SPECIES	195								ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Golden snub-nosed monkey	MODERN SPECIES	977									ENSRROG00000033043	ENSRROG00000028871	ZFP92 (ENSRROG00000031212)	HAUS7 (ENSRROG00000005507)	BGN (ENSRROG00000042294)	ATP2B3 (ENSRROG00000043666)	CCNQ (ENSRROG00000038429)	DUSP9 (ENSRROG00000037162) #22	ENSRROG00000039351	PNCK (ENSRROG00000044383)	SLC6A8 (ENSRROG00000045113)	BCAP31 (ENSRROG00000045725)	ABCD1 (ENSRROG00000037289)	PLXNB3 (ENSRROG00000039660)	SRPK3 (ENSRROG00000011319)	IDH3G (ENSRROG00000044366)	SSR4 (ENSRROG00000035638)	PDZD4 (ENSRROG00000042678)	L1CAM (ENSRROG00000041494)	AVPR2 (ENSRROG00000036522)	ARHGAP4 (ENSRROG00000045508)	NAA10 (ENSRROG00000041881)	RENBP (ENSRROG00000034139)
Black snub-nosed monkey	MODERN SPECIES	661								PNMA6F (ENSRBIG00000030196)	ENSRBIG00000041318	PNMA6E (ENSRBIG00000025010)	ZFP92 (ENSRBIG00000027712)	HAUS7 (ENSRBIG00000038209)	BGN (ENSRBIG00000043894)	ATP2B3 (ENSRBIG00000030237)	CCNQ (ENSRBIG00000034283)	DUSP9 (ENSRBIG00000031725) #22	ENSRBIG00000028856	PNCK (ENSRBIG00000039714)	SLC6A8 (ENSRBIG00000040899)	BCAP31 (ENSRBIG00000043421)	ABCD1 (ENSRBIG00000044662)	PLXNB3 (ENSRBIG00000026773)	IDH3G (ENSRBIG00000035445)	SSR4 (ENSRBIG00000015579)	PDZD4 (ENSRBIG00000029436)	L1CAM (ENSRBIG00000036638)	ENSRBIG00000032383	ENSRBIG00000034619	ARHGAP4 (ENSRBIG00000031629)	NAA10 (ENSRBIG00000040703)	RENBP (ENSRBIG00000020101)
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Pig-tailed macaque	MODERN SPECIES	390								PNMA6F (ENSMNEG00000031969)	ENSMNEG00000039113	PNMA6E (ENSMNEG00000038171)	ZFP92 (ENSMNEG00000042434)	HAUS7 (ENSMNEG00000036428)	BGN (ENSMNEG00000042759)	ATP2B3 (ENSMNEG00000044784)	CCNQ (ENSMNEG00000042079)	DUSP9 (ENSMNEG00000040094) #22	ENSMNEG00000028994	PNCK (ENSMNEG00000040586)	SLC6A8 (ENSMNEG00000005457)	BCAP31 (ENSMNEG00000028474)	ABCD1 (ENSMNEG00000033571)	PLXNB3 (ENSMNEG00000032414)	SRPK3 (ENSMNEG00000030566)	IDH3G (ENSMNEG00000042620)	SSR4 (ENSMNEG00000042721)	PDZD4 (ENSMNEG00000041450)	L1CAM (ENSMNEG00000042796)	AVPR2 (ENSMNEG00000029040)	ARHGAP4 (ENSMNEG00000039860)	NAA10 (ENSMNEG00000034261)	RENBP (ENSMNEG00000038526)
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00940000164672.a.b	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272
Rhesus	MODERN SPECIES	327	CETN2 (ENSMMUG00000020743)	NSDHL (ENSMMUG00000013176)	ZNF185 (ENSMMUG00000015264)	PNMA5 (ENSMMUG00000018469)	PNMA3 (ENSMMUG00000010897)	ENSMMUG00000063804	ENSMMUG00000053273	PNMA6F (ENSMMUG00000048764)	ENSMMUG00000013386	PNMA6E (ENSMMUG00000045255)	ZFP92 (ENSMMUG00000057937)	HAUS7 (ENSMMUG00000012739)	BGN (ENSMMUG00000012743)	ATP2B3 (ENSMMUG00000011478)	CCNQ (ENSMMUG00000011480)	DUSP9 (ENSMMUG00000056988) #22	PNCK (ENSMMUG00000010585)	SLC6A8 (ENSMMUG00000012742)	BCAP31 (ENSMMUG00000012744)	ABCD1 (ENSMMUG00000012746)	SRPK3 (ENSMMUG00000003372)	IDH3G (ENSMMUG00000003374)	SSR4 (ENSMMUG00000003375)	PDZD4 (ENSMMUG00000003377)	L1CAM (ENSMMUG00000003379)	AVPR2 (ENSMMUG00000064945)	ARHGAP4 (ENSMMUG00000000323)	NAA10 (ENSMMUG00000000322)	RENBP (ENSMMUG00000000320)	HCFC1 (ENSMMUG00000000319)	TMEM187 (ENSMMUG00000005132)
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Olive baboon	MODERN SPECIES	792	IRAK1 (ENSPANG00000015781)	TMEM187 (ENSPANG00000050796)	HCFC1 (ENSPANG00000024276)	RENBP (ENSPANG00000008961)	NAA10 (ENSPANG00000014390)	ARHGAP4 (ENSPANG00000010087)	AVPR2 (ENSPANG00000004382)	L1CAM (ENSPANG00000013145)	PDZD4 (ENSPANG00000000291)	SSR4 (ENSPANG00000006591)	IDH3G (ENSPANG00000023323)	SRPK3 (ENSPANG00000004220)	PLXNB3 (ENSPANG00000008014)	ABCD1 (ENSPANG00000025399)	CCNQ (ENSPANG00000026424)	DUSP9 (ENSPANG00000004029) #22	PNCK (ENSPANG00000013747)	SLC6A8 (ENSPANG00000010089)	BCAP31 (ENSPANG00000001625)	ATP2B3 (ENSPANG00000014878)	BGN (ENSPANG00000022851)	HAUS7 (ENSPANG00000014066)	TREX2 (ENSPANG00000039672)	ZFP92 (ENSPANG00000006612)	ENSPANG00000035942	ENSPANG00000015246	PNMA6F (ENSPANG00000035246)	ENSPANG00000040158	PNMA3 (ENSPANG00000008016)	PNMA5 (ENSPANG00000041264)	ZNF185 (ENSPANG00000011355)
Cercopithecinae_d	ANCESTRAL SPECIES	141								ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Sooty mangabey	MODERN SPECIES	286														ENSCATG00000032628	CCNQ (ENSCATG00000013187)	DUSP9 (ENSCATG00000009164) #22	ENSCATG00000003729	PNCK (ENSCATG00000041955)	SLC6A8 (ENSCATG00000001771)	BCAP31 (ENSCATG00000043253)	ABCD1 (ENSCATG00000042536)	PLXNB3 (ENSCATG00000037895)	SRPK3 (ENSCATG00000045096)	IDH3G (ENSCATG00000042112)	SSR4 (ENSCATG00000006344)	PDZD4 (ENSCATG00000043997)	L1CAM (ENSCATG00000041515)	AVPR2 (ENSCATG00000036647)	ARHGAP4 (ENSCATG00000042499)	NAA10 (ENSCATG00000038709)	RENBP (ENSCATG00000037009)
Drill	MODERN SPECIES	1411								PNMA6F (ENSMLEG00000035105)	ENSMLEG00000040255	PNMA6E (ENSMLEG00000041204)	ZFP92 (ENSMLEG00000013319)	HAUS7 (ENSMLEG00000038483)	BGN (ENSMLEG00000029067)	ATP2B3 (ENSMLEG00000032665)	CCNQ (ENSMLEG00000039950)	DUSP9 (ENSMLEG00000042559) #22	ENSMLEG00000027362	PNCK (ENSMLEG00000027716)	SLC6A8 (ENSMLEG00000042530)	BCAP31 (ENSMLEG00000042884)	ABCD1 (ENSMLEG00000041428)	PLXNB3 (ENSMLEG00000032454)	IDH3G (ENSMLEG00000038908)	SSR4 (ENSMLEG00000016802)	PDZD4 (ENSMLEG00000004595)	L1CAM (ENSMLEG00000036326)	AVPR2 (ENSMLEG00000042889)	ARHGAP4 (ENSMLEG00000038659)	NAA10 (ENSMLEG00000032424)	RENBP (ENSMLEG00000038487)	HCFC1 (ENSMLEG00000042451)
Vervet Monkey	MODERN SPECIES	203	ENSCSAG00000006992	CETN2 (ENSCSAG00000006984)	NSDHL (ENSCSAG00000006982)	ZNF185 (ENSCSAG00000006979)	PNMA5 (ENSCSAG00000000526)	PNMA3 (ENSCSAG00000000525)	MAGEA1 (ENSCSAG00000000524)	ENSCSAG00000006975	ENSCSAG00000006968	ZFP92 (ENSCSAG00000006967)	HAUS7 (ENSCSAG00000006961)	ENSCSAG00000006955	BGN (ENSCSAG00000006954)	ATP2B3 (ENSCSAG00000006948)	CCNQ (ENSCSAG00000006940)	DUSP9 (ENSCSAG00000006926) #22	PNCK (ENSCSAG00000006923)	SLC6A8 (ENSCSAG00000006918)	BCAP31 (ENSCSAG00000006911)	PLXNB3 (ENSCSAG00000006893)	SRPK3 (ENSCSAG00000006884)	IDH3G (ENSCSAG00000006879)	SSR4 (ENSCSAG00000006874)	PDZD4 (ENSCSAG00000006871)	L1CAM (ENSCSAG00000006864)	AVPR2 (ENSCSAG00000006857)	ARHGAP4 (ENSCSAG00000006854)	NAA10 (ENSCSAG00000006823)	RENBP (ENSCSAG00000006814)	HCFC1 (ENSCSAG00000006809)	TMEM187 (ENSCSAG00000000523)
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.c	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a.f	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Cebidae	ANCESTRAL SPECIES	27	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.c	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a.f	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Marmoset	MODERN SPECIES	78	ENSCJAG00000016338	NSDHL (ENSCJAG00000016347)	ZNF185 (ENSCJAG00000016363)	PNMA5 (ENSCJAG00000016373)	PNMA3 (ENSCJAG00000022542)	PWWP4 (ENSCJAG00000052872)	PNMA6F (ENSCJAG00000042286)	ENSCJAG00000019468	PNMA6E (ENSCJAG00000048415)	ZFP92 (ENSCJAG00000011538)	TREX2 (ENSCJAG00000011515)	HAUS7 (ENSCJAG00000036194)	BGN (ENSCJAG00000011493)	ATP2B3 (ENSCJAG00000011413)	ENSCJAG00000011407	DUSP9 (ENSCJAG00000047408) #22	ENSCJAG00000081213	ENSCJAG00000011356	BCAP31 (ENSCJAG00000011348)	ABCD1 (ENSCJAG00000011337)	PLXNB3 (ENSCJAG00000011267)	SRPK3 (ENSCJAG00000011233)	PDZD4 (ENSCJAG00000011185)	SSR4 (ENSCJAG00000011167)	ENSCJAG00000074256	ENSCJAG00000022809	L1CAM (ENSCJAG00000011023)	ARHGAP4 (ENSCJAG00000011008)	AVPR2 (ENSCJAG00000011022)	NAA10 (ENSCJAG00000014506)	RENBP (ENSCJAG00000014500)
Cebidae_a	ANCESTRAL SPECIES	78							ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445.c	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a.f	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Capuchin	MODERN SPECIES	597								ENSCCAG00000024093	ENSCCAG00000020739	ENSCCAG00000030112	ZFP92 (ENSCCAG00000034129)	HAUS7 (ENSCCAG00000030265)	BGN (ENSCCAG00000018493)	ATP2B3 (ENSCCAG00000027100)	CCNQ (ENSCCAG00000029897)	DUSP9 (ENSCCAG00000033198) #22	ENSCCAG00000023569	PNCK (ENSCCAG00000021403)	SLC6A8 (ENSCCAG00000035546)	BCAP31 (ENSCCAG00000033187)	ABCD1 (ENSCCAG00000019717)	PLXNB3 (ENSCCAG00000024352)	SRPK3 (ENSCCAG00000021599)	SSR4 (ENSCCAG00000020454)	PDZD4 (ENSCCAG00000022158)	L1CAM (ENSCCAG00000032233)	AVPR2 (ENSCCAG00000028592)	ARHGAP4 (ENSCCAG00000025262)	ENSCCAG00000033959	RENBP (ENSCCAG00000037940)	HCFC1 (ENSCCAG00000021425)
Bolivian squirrel monkey	MODERN SPECIES	236								PNMA6F (ENSSBOG00000015383)	ENSSBOG00000027546	ENSSBOG00000030661	ZFP92 (ENSSBOG00000028775)	HAUS7 (ENSSBOG00000028472)	BGN (ENSSBOG00000029980)	ATP2B3 (ENSSBOG00000032052)	ENSSBOG00000029871	DUSP9 (ENSSBOG00000001225) #22	PNCK (ENSSBOG00000031039)	ENSSBOG00000033535	ENSSBOG00000028295	ABCD1 (ENSSBOG00000024968)	PLXNB3 (ENSSBOG00000025081)	SRPK3 (ENSSBOG00000024085)	IDH3G (ENSSBOG00000019899)	SSR4 (ENSSBOG00000022316)	PDZD4 (ENSSBOG00000033217)	L1CAM (ENSSBOG00000033301)	AVPR2 (ENSSBOG00000031595)	ARHGAP4 (ENSSBOG00000023946)	ENSSBOG00000020071	RENBP (ENSSBOG00000034728)	HCFC1 (ENSSBOG00000034222)
Mas night monkey	MODERN SPECIES	1312								PNMA6F (ENSANAG00000025537)	ZNF275 (ENSANAG00000025581)	ENSANAG00000022983	ZFP92 (ENSANAG00000038344)	HAUS7 (ENSANAG00000022685)	BGN (ENSANAG00000033529)	ATP2B3 (ENSANAG00000032972)	ENSANAG00000000457	DUSP9 (ENSANAG00000019919) #22	PNCK (ENSANAG00000010774)	ENSANAG00000037607	BCAP31 (ENSANAG00000035222)	ABCD1 (ENSANAG00000035583)	PLXNB3 (ENSANAG00000036384)	SRPK3 (ENSANAG00000037077)	ENSANAG00000024077	SSR4 (ENSANAG00000035059)	PDZD4 (ENSANAG00000026191)	L1CAM (ENSANAG00000035752)	AVPR2 (ENSANAG00000022496)	ARHGAP4 (ENSANAG00000023680)	NAA10 (ENSANAG00000019745)	RENBP (ENSANAG00000034421)	HCFC1 (ENSANAG00000030898)
Tarsier	MODERN SPECIES	2197									ENSTSYG00000000195	ENSTSYG00000036390	ENSTSYG00000031978	HAUS7 (ENSTSYG00000030026)	BGN (ENSTSYG00000030156)	ATP2B3 (ENSTSYG00000034877)	FAM58A (ENSTSYG00000026900)	DUSP9 (ENSTSYG00000026755) #22	PNCK (ENSTSYG00000034891)	ENSTSYG00000033997	BCAP31 (ENSTSYG00000003985)	ABCD1 (ENSTSYG00000028624)	PLXNB3 (ENSTSYG00000032080)
Strepsirrhini	ANCESTRAL SPECIES	45	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Lemuriformes	ANCESTRAL SPECIES	60	ENSGT00940000161201	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935.q.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Mouse lemur	MODERN SPECIES	169	GABRA3 (ENSMICG00000042718)	ENSMICG00000012692	ENSMICG00000013442	GABRQ (ENSMICG00000047310)	ENSMICG00000005862	NSDHL (ENSMICG00000005868)	ZNF185 (ENSMICG00000005873)	ENSMICG00000046490	ENSMICG00000046759	ZFP92 (ENSMICG00000011893)	TREX2 (ENSMICG00000038278)	HAUS7 (ENSMICG00000000008)	BGN (ENSMICG00000000009)	ATP2B3 (ENSMICG00000000010)	CCNQ (ENSMICG00000032354)	DUSP9 (ENSMICG00000044469) #22	PNCK (ENSMICG00000013947)	ENSMICG00000003428	BCAP31 (ENSMICG00000003437)	ABCD1 (ENSMICG00000003441)	PLXNB3 (ENSMICG00000003449)	SRPK3 (ENSMICG00000003464)	IDH3G (ENSMICG00000003472)	SSR4 (ENSMICG00000003476)	PDZD4 (ENSMICG00000027183)	L1CAM (ENSMICG00000003486)	AVPR2 (ENSMICG00000037091)	ARHGAP4 (ENSMICG00000016246)	NAA10 (ENSMICG00000010278)	RENBP (ENSMICG00000033869)	HCFC1 (ENSMICG00000016286)
Lemuriformes_a	ANCESTRAL SPECIES	110								ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Coquerels sifaka	MODERN SPECIES	882								ENSPCOG00000020542	ENSPCOG00000025588	ENSPCOG00000018479	TREX2 (ENSPCOG00000022646)	HAUS7 (ENSPCOG00000016936)	BGN (ENSPCOG00000018303)	ATP2B3 (ENSPCOG00000022001)	CCNQ (ENSPCOG00000020959)	DUSP9 (ENSPCOG00000021779) #22	PNCK (ENSPCOG00000019463)	ENSPCOG00000024763	BCAP31 (ENSPCOG00000017960)	ABCD1 (ENSPCOG00000016908)	PLXNB3 (ENSPCOG00000024468)	SRPK3 (ENSPCOG00000018569)	IDH3G (ENSPCOG00000023374)	SSR4 (ENSPCOG00000028866)	PDZD4 (ENSPCOG00000025180)	L1CAM (ENSPCOG00000010437)	AVPR2 (ENSPCOG00000008409)	ARHGAP4 (ENSPCOG00000009927)	ENSPCOG00000027024	RENBP (ENSPCOG00000013414)	HCFC1 (ENSPCOG00000028065)
Greater bamboo lemur	MODERN SPECIES	277							LARP7 (ENSPSMG00000003620)	ANK2 (ENSPSMG00000005110)	CAMK2D (ENSPSMG00000007663)	ARSJ (ENSPSMG00000008750)	ATP2B3 (ENSPSMG00000009254)	BGN (ENSPSMG00000009998)	HAUS7 (ENSPSMG00000010024)	TREX2 (ENSPSMG00000010030)	ZFP92 (ENSPSMG00000010034)	DUSP9 (ENSPSMG00000010039) #22	PNCK (ENSPSMG00000010066)	ENSPSMG00000010151	ENSPSMG00000010220
Bushbaby	MODERN SPECIES	364					ENSOGAG00000029555	ENSOGAG00000030548	ENSOGAG00000032682	ENSOGAG00000031649	ZFP92 (ENSOGAG00000029963)	TREX2 (ENSOGAG00000033175)	HAUS7 (ENSOGAG00000008917)	ENSOGAG00000029324	BGN (ENSOGAG00000008920)	ATP2B3 (ENSOGAG00000008921)	ENSOGAG00000033279	DUSP9 (ENSOGAG00000002412) #22	PNCK (ENSOGAG00000006718)	ENSOGAG00000031270	BCAP31 (ENSOGAG00000006721)	ABCD1 (ENSOGAG00000027153)	PLXNB3 (ENSOGAG00000003133)	SRPK3 (ENSOGAG00000003138)	ENSOGAG00000006735	SSR4 (ENSOGAG00000006738)	PDZD4 (ENSOGAG00000006741)	L1CAM (ENSOGAG00000015077)	AVPR2 (ENSOGAG00000030887)	ARHGAP4 (ENSOGAG00000015087)	NAA10 (ENSOGAG00000013263)	RENBP (ENSOGAG00000032778)	HCFC1 (ENSOGAG00000015100)
Laurasiatheria	ANCESTRAL SPECIES	26	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161880 #22
Hedgehog	MODERN SPECIES	13152																DUSP9 (ENSEEUG00000001589) #22
Common shrew	MODERN SPECIES	2073																DUSP9 (ENSSARG00000007756) #22
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Suina	ANCESTRAL SPECIES	7	ENSGT00940000159444	ENSGT00940000162167	ENSGT00910000144363.b	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Chacoan peccary	MODERN SPECIES	64													BGN (ENSCWAG00000015339)	ATP2B3 (ENSCWAG00000014036)	CCNQ (ENSCWAG00000013960)	DUSP9 (ENSCWAG00000013930) #22	PNCK (ENSCWAG00000013628)	ENSCWAG00000013485	BCAP31 (ENSCWAG00000013428)	ABCD1 (ENSCWAG00000013367)	PLXNB3 (ENSCWAG00000013064)	SRPK3 (ENSCWAG00000012244)	IDH3G (ENSCWAG00000012166)	SSR4 (ENSCWAG00000012103)	PDZD4 (ENSCWAG00000011881)	L1CAM (ENSCWAG00000010938)	AVPR2 (ENSCWAG00000010837)	ARHGAP4 (ENSCWAG00000010083)	NAA10 (ENSCWAG00000009933)	RENBP (ENSCWAG00000009675)	HCFC1 (ENSCWAG00000009363)
Pig	MODERN SPECIES	300	ZNF185 (ENSSSCG00000012759)	PNMA5 (ENSSSCG00000038758)	ENSSSCG00000012762	ENSSSCG00000048272	ENSSSCG00000059750	ENSSSCG00000057031	ENSSSCG00000035599	ENSSSCG00000049239	ENSSSCG00000030075	ZFP92 (ENSSSCG00000012768)	HAUS7 (ENSSSCG00000012767)	BGN (ENSSSCG00000012766)	SLC6A8 (ENSSSCG00000012771)	ATP2B3 (ENSSSCG00000012769)	CCNQ (ENSSSCG00000012770)	DUSP9 (ENSSSCG00000012774) #22	PNCK (ENSSSCG00000012773)	BCAP31 (ENSSSCG00000012772)	ABCD1 (ENSSSCG00000012779)	PLXNB3 (ENSSSCG00000012780)	ENSSSCG00000024676	ENSSSCG00000053900	IDH3G (ENSSSCG00000012783)	SSR4 (ENSSSCG00000012784)	PDZD4 (ENSSSCG00000012785)	L1CAM (ENSSSCG00000012787)	AVPR2 (ENSSSCG00000012789)	ARHGAP4 (ENSSSCG00000012790)	NAA10 (ENSSSCG00000012791)	RENBP (ENSSSCG00000012792)	HCFC1 (ENSSSCG00000012793)
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Cetacea	ANCESTRAL SPECIES	19	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v.e.a	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v.e.a	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00950000185059.b.a.a	ENSGT00940000153582.b.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v.e.a	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272
Beluga whale	MODERN SPECIES	139			CETN2 (ENSDLEG00000008486)	NSDHL (ENSDLEG00000008500)	ZNF185 (ENSDLEG00000008571)	ENSDLEG00000008777	ENSDLEG00000008821	ENSDLEG00000008874	ENSDLEG00000008903	ZFP92 (ENSDLEG00000008939)	TREX2 (ENSDLEG00000008947)	HAUS7 (ENSDLEG00000008961)	BGN (ENSDLEG00000009001)	ATP2B3 (ENSDLEG00000009068)	CCNQ (ENSDLEG00000009254)	DUSP9 (ENSDLEG00000009275) #22	PNCK (ENSDLEG00000009302)	ENSDLEG00000009357	BCAP31 (ENSDLEG00000009436)	ABCD1 (ENSDLEG00000009490)	PLXNB3 (ENSDLEG00000009548)	SRPK3 (ENSDLEG00000009748)	IDH3G (ENSDLEG00000010539)	SSR4 (ENSDLEG00000010578)	PDZD4 (ENSDLEG00000010618)	L1CAM (ENSDLEG00000010633)	AVPR2 (ENSDLEG00000010715)	ARHGAP4 (ENSDLEG00000010745)	RENBP (ENSDLEG00000010782)	HCFC1 (ENSDLEG00000010826)	TMEM187 (ENSDLEG00000010884)
Narwhal	MODERN SPECIES	309	MAGEA10 (ENSMMNG00015011533)	GABRA3 (ENSMMNG00015011549)	GABRQ (ENSMMNG00015011628)	CETN2 (ENSMMNG00015011652)	NSDHL (ENSMMNG00015011668)	ENSMMNG00015011709	ENSMMNG00015011751	PNMA5 (ENSMMNG00015011762)	ZNF275 (ENSMMNG00015011779)	ENSMMNG00015011848	TREX2 (ENSMMNG00015011851)	HAUS7 (ENSMMNG00015011870)	BGN (ENSMMNG00015011917)	ATP2B3 (ENSMMNG00015011983)	CCNQ (ENSMMNG00015012078)	DUSP9 (ENSMMNG00015012090) #22	PNCK (ENSMMNG00015012107)	BCAP31 (ENSMMNG00015012134)	ABCD1 (ENSMMNG00015012167)	PLXNB3 (ENSMMNG00015012205)	SRPK3 (ENSMMNG00015012303)	IDH3G (ENSMMNG00015012488)	SSR4 (ENSMMNG00015012518)	PDZD4 (ENSMMNG00015012532)	L1CAM (ENSMMNG00015012599)	AVPR2 (ENSMMNG00015012757)	ARHGAP4 (ENSMMNG00015012794)	RENBP (ENSMMNG00015012853)	HCFC1 (ENSMMNG00015012895)	TMEM187 (ENSMMNG00015012935)	IRAK1 (ENSMMNG00015012947)
Vaquita	MODERN SPECIES	34	ENSPSNG00000016487	CETN2 (ENSPSNG00000016540)	NSDHL (ENSPSNG00000016593)	ENSPSNG00000016682	ENSPSNG00000016703	ENSPSNG00000016766	ENSPSNG00000016858	ENSPSNG00000016906	ZNF275 (ENSPSNG00000016963)	ZFP92 (ENSPSNG00000017091)	TREX2 (ENSPSNG00000017121)	HAUS7 (ENSPSNG00000017146)	BGN (ENSPSNG00000017293)	ATP2B3 (ENSPSNG00000017785)	CCNQ (ENSPSNG00000020074)	DUSP9 (ENSPSNG00000020127) #22	PNCK (ENSPSNG00000020162)	ENSPSNG00000020216	BCAP31 (ENSPSNG00000020287)	ABCD1 (ENSPSNG00000020339)	PLXNB3 (ENSPSNG00000020397)	SRPK3 (ENSPSNG00000020624)	IDH3G (ENSPSNG00000021007)	SSR4 (ENSPSNG00000021050)	PDZD4 (ENSPSNG00000021105)	L1CAM (ENSPSNG00000021249)	AVPR2 (ENSPSNG00000021500)	ARHGAP4 (ENSPSNG00000021560)	NAA10 (ENSPSNG00000021621)	ENSPSNG00000021660	HCFC1 (ENSPSNG00000021713)
Dolphin	MODERN SPECIES	1323														ATP2B3 (ENSTTRG00000011664)	CCNQ (ENSTTRG00000011680)	DUSP9 (ENSTTRG00000011684) #22	PNCK (ENSTTRG00000011687)	ENSTTRG00000011689	BCAP31 (ENSTTRG00000011698)	ABCD1 (ENSTTRG00000011702)	PLXNB3 (ENSTTRG00000011705)	SRPK3 (ENSTTRG00000011724)	IDH3G (ENSTTRG00000011728)
Sperm whale	MODERN SPECIES	13	GABRQ (ENSPCTG00005018852)	ENSPCTG00005018953	ENSPCTG00005018999	ENSPCTG00005019029	ENSPCTG00005019056	CETN2 (ENSPCTG00005019083)	NSDHL (ENSPCTG00005019131)	ZNF185 (ENSPCTG00005019207)	ENSPCTG00005019540	ENSPCTG00005019569	ZFP92 (ENSPCTG00005019580)	HAUS7 (ENSPCTG00005019634)	BGN (ENSPCTG00005019735)	ATP2B3 (ENSPCTG00005019806)	CCNQ (ENSPCTG00005020427)	DUSP9 (ENSPCTG00005020457) #22	PNCK (ENSPCTG00005020491)	SLC6A8 (ENSPCTG00005020619)	BCAP31 (ENSPCTG00005020665)	ABCD1 (ENSPCTG00005020693)	PLXNB3 (ENSPCTG00005020721)	SRPK3 (ENSPCTG00005020896)	IDH3G (ENSPCTG00005021222)	SSR4 (ENSPCTG00005021260)	PDZD4 (ENSPCTG00005021324)	L1CAM (ENSPCTG00005021438)	AVPR2 (ENSPCTG00005021602)	ARHGAP4 (ENSPCTG00005021658)	NAA10 (ENSPCTG00005021859)	RENBP (ENSPCTG00005021884)	HCFC1 (ENSPCTG00005021915)
Blue whale	MODERN SPECIES	40	GABRQ (ENSBMSG00010021381)	ENSBMSG00010021410	ENSBMSG00010021416	ENSBMSG00010021420	ENSBMSG00010021428	ENSBMSG00010021440	CETN2 (ENSBMSG00010021445)	NSDHL (ENSBMSG00010021450)	ZNF185 (ENSBMSG00010016223)	ZFP92 (ENSBMSG00010016386)	TREX2 (ENSBMSG00010016424)	HAUS7 (ENSBMSG00010016441)	BGN (ENSBMSG00010016563)	ATP2B3 (ENSBMSG00010016642)	CCNQ (ENSBMSG00010017295)	DUSP9 (ENSBMSG00010017328) #22	PNCK (ENSBMSG00010017371)	ENSBMSG00010017516	BCAP31 (ENSBMSG00010017577)	ABCD1 (ENSBMSG00010017634)	PLXNB3 (ENSBMSG00010017695)	SRPK3 (ENSBMSG00010017917)	IDH3G (ENSBMSG00010018140)	SSR4 (ENSBMSG00010018296)	PDZD4 (ENSBMSG00010018349)	L1CAM (ENSBMSG00010018510)	AVPR2 (ENSBMSG00010018770)	ARHGAP4 (ENSBMSG00010018853)	NAA10 (ENSBMSG00010019439)	RENBP (ENSBMSG00010019364)	HCFC1 (ENSBMSG00010019528)
Pecora	ANCESTRAL SPECIES	38						ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Yarkand deer	MODERN SPECIES	1323	TCEAL1 (ENSCHYG00000015273)	ENSCHYG00000015211	ENSCHYG00000026699	ENSCHYG00000026697	ENSCHYG00000026691	ENSCHYG00000026686	ENSCHYG00000026676	ENSCHYG00000026670	ENSCHYG00000026662	ENSCHYG00000026653	TREX2 (ENSCHYG00000026645)	HAUS7 (ENSCHYG00000026596)	BGN (ENSCHYG00000026554)	ATP2B3 (ENSCHYG00000026445)	CCNQ (ENSCHYG00000026390)	DUSP9 (ENSCHYG00000026372) #22	PNCK (ENSCHYG00000026358)	ENSCHYG00000026332	ENSCHYG00000026299	ABCD1 (ENSCHYG00000026259)	PLXNB3 (ENSCHYG00000026217)	SRPK3 (ENSCHYG00000026187)	ENSCHYG00000026148	ENSCHYG00000026124	PDZD4 (ENSCHYG00000026107)	L1CAM (ENSCHYG00000025877)	AVPR2 (ENSCHYG00000025838)	ARHGAP4 (ENSCHYG00000025566)	ENSCHYG00000025281	RENBP (ENSCHYG00000025248)	HCFC1 (ENSCHYG00000025112)
Percora_a	ANCESTRAL SPECIES	35						ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Siberian musk deer	MODERN SPECIES	14							ENSMMSG00000017989	ENSMMSG00000017963	ENSMMSG00000017951	ENSMMSG00000017851	TREX2 (ENSMMSG00000017821)	HAUS7 (ENSMMSG00000017752)	BGN (ENSMMSG00000017708)	ATP2B3 (ENSMMSG00000017117)	CCNQ (ENSMMSG00000017061)	DUSP9 (ENSMMSG00000017038) #22	PNCK (ENSMMSG00000016992)	ENSMMSG00000016948	BCAP31 (ENSMMSG00000016925)	ABCD1 (ENSMMSG00000016894)	PLXNB3 (ENSMMSG00000016798)	SRPK3 (ENSMMSG00000016477)	IDH3G (ENSMMSG00000016400)	SSR4 (ENSMMSG00000016336)	PDZD4 (ENSMMSG00000016210)	L1CAM (ENSMMSG00000015717)	AVPR2 (ENSMMSG00000015654)	ARHGAP4 (ENSMMSG00000015607)	NAA10 (ENSMMSG00000015542)	RENBP (ENSMMSG00000015497)	HCFC1 (ENSMMSG00000015453)
Bovidae	ANCESTRAL SPECIES	33						ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Bovinae	ANCESTRAL SPECIES	46							ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Bos	ANCESTRAL SPECIES	36	ENSGT00390000016992.s	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000235238.e.b	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Bos_b	ANCESTRAL SPECIES	31	ENSGT00940000154783.f	ENSGT00390000016992.s	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Cow	MODERN SPECIES	177	CMC4 (ENSBTAG00000007813)	FUNDC2 (ENSBTAG00000016977)	F8 (ENSBTAG00000010726)	ENSBTAG00000033167	MPP1 (ENSBTAG00000013046)	DKC1 (ENSBTAG00000013045)	GAB3 (ENSBTAG00000013044)	ENSBTAG00000023820	ENSBTAG00000020185	ENSBTAG00000047917	ENSBTAG00000050830	HAUS7 (ENSBTAG00000014095)	BGN (ENSBTAG00000005250)	ATP2B3 (ENSBTAG00000000520)	CCNQ (ENSBTAG00000011350)	DUSP9 (ENSBTAG00000008319) #22	PNCK (ENSBTAG00000017430)	SLC6A8 (ENSBTAG00000009959)	BCAP31 (ENSBTAG00000020547)	ABCD1 (ENSBTAG00000020551)	PLXNB3 (ENSBTAG00000010146)	SRPK3 (ENSBTAG00000001058)	IDH3G (ENSBTAG00000001059)	SSR4 (ENSBTAG00000021421)	PDZD4 (ENSBTAG00000021422)	ENSBTAG00000038379	L1CAM (ENSBTAG00000013462)	AVPR2 (ENSBTAG00000047138)	ARHGAP4 (ENSBTAG00000047531)	NAA10 (ENSBTAG00000047702)	RENBP (ENSBTAG00000047827)
Hybrid Bos Indicus	MODERN SPECIES	315	FUNDC2 (ENSBIXG00005006322)	ENSBIXG00005011325	F8 (ENSBIXG00005006715)	MPP1 (ENSBIXG00005011616)	DKC1 (ENSBIXG00005011665)	GAB3 (ENSBIXG00005011700)	ENSBIXG00005011731	ENSBIXG00005001157	ENSBIXG00005011758	ENSBIXG00005011766	HAUS7 (ENSBIXG00005001172)	ENSBIXG00005011824	BGN (ENSBIXG00005011869)	ATP2B3 (ENSBIXG00005001219)	CCNQ (ENSBIXG00005012024)	ENSBIXG00005012054 #22	PNCK (ENSBIXG00005012167)	ENSBIXG00005012235	BCAP31 (ENSBIXG00005012267)	ABCD1 (ENSBIXG00005001289)	PLXNB3 (ENSBIXG00005012308)	SRPK3 (ENSBIXG00005012339)	SSR4 (ENSBIXG00005012375)	PDZD4 (ENSBIXG00005012442)	ENSBIXG00005012493	L1CAM (ENSBIXG00005012618)	AVPR2 (ENSBIXG00005012700)	ARHGAP4 (ENSBIXG00005001429)	NAA10 (ENSBIXG00005012916)	RENBP (ENSBIXG00005007005)	HCFC1 (ENSBIXG00005013025)
Bos_a	ANCESTRAL SPECIES	39	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000235238.e.b	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Domestic yak	MODERN SPECIES	69	F8 (ENSBGRG00000024985)	ENSBGRG00000017378	ENSBGRG00000017426	MPP1 (ENSBGRG00000017459)	DKC1 (ENSBGRG00000017777)	GAB3 (ENSBGRG00000018202)	ENSBGRG00000018336	ENSBGRG00000018361	ENSBGRG00000018441	ENSBGRG00000018662	HAUS7 (ENSBGRG00000018702)	ENSBGRG00000018982	BGN (ENSBGRG00000019034)	ATP2B3 (ENSBGRG00000019084)	CCNQ (ENSBGRG00000019445)	DUSP9 (ENSBGRG00000019532) #22	ENSBGRG00000019589	ENSBGRG00000019737	BCAP31 (ENSBGRG00000019806)	ABCD1 (ENSBGRG00000019899)	SRPK3 (ENSBGRG00000020582)	IDH3G (ENSBGRG00000020629)	ENSBGRG00000020770	PDZD4 (ENSBGRG00000020897)	ENSBGRG00000020944	L1CAM (ENSBGRG00000020974)	AVPR2 (ENSBGRG00000021537)	ARHGAP4 (ENSBGRG00000021595)	NAA10 (ENSBGRG00000021764)	RENBP (ENSBGRG00000021852)	HCFC1 (ENSBGRG00000021965)
Wild yak	MODERN SPECIES	2346																DUSP9 (ENSBMUG00000011871) #22	PNCK (ENSBMUG00000011937)	ENSBMUG00000011967	BCAP31 (ENSBMUG00000011987)	ABCD1 (ENSBMUG00000012003)	PLXNB3 (ENSBMUG00000012298)	SRPK3 (ENSBMUG00000012477)	IDH3G (ENSBMUG00000012493)	SSR4 (ENSBMUG00000012499)	PDZD4 (ENSBMUG00000012542)	L1CAM (ENSBMUG00000012610)	AVPR2 (ENSBMUG00000012644)	ARHGAP4 (ENSBMUG00000012757)	NAA10 (ENSBMUG00000012855)	RENBP (ENSBMUG00000012951)
Caprinae	ANCESTRAL SPECIES	45	ENSGT00940000161201	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00390000001700.a.b.b.a.a	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Goat	MODERN SPECIES	65															CCNQ (ENSCHIG00000016499)	DUSP9 (ENSCHIG00000012585) #22	PNCK (ENSCHIG00000003212)	ENSCHIG00000021442	BCAP31 (ENSCHIG00000012576)	ABCD1 (ENSCHIG00000020085)	PLXNB3 (ENSCHIG00000012234)	SRPK3 (ENSCHIG00000002559)	IDH3G (ENSCHIG00000016785)	SSR4 (ENSCHIG00000006805)	PDZD4 (ENSCHIG00000000364)
Rambouillet Sheep	MODERN SPECIES	205	CNGA2 (ENSOARG00020006792)	GABRA3 (ENSOARG00020006461)	CETN2 (ENSOARG00020025056)	NSDHL (ENSOARG00020025037)	ENSOARG00020024990	ENSOARG00020024988	ENSOARG00020024977	ENSOARG00020024974	ENSOARG00020024952	ZFP92 (ENSOARG00020024935)	TREX2 (ENSOARG00020024928)	HAUS7 (ENSOARG00020024905)	BGN (ENSOARG00020024895)	ATP2B3 (ENSOARG00020024861)	CCNQ (ENSOARG00020024846)	DUSP9 (ENSOARG00020024837) #22	PNCK (ENSOARG00020024721)	ENSOARG00020024643	BCAP31 (ENSOARG00020024614)	ABCD1 (ENSOARG00020024584)	PLXNB3 (ENSOARG00020024564)	IDH3G (ENSOARG00020024407)	SSR4 (ENSOARG00020024383)	PDZD4 (ENSOARG00020024315)	L1CAM (ENSOARG00020023921)	AVPR2 (ENSOARG00020023848)	ARHGAP4 (ENSOARG00020023326)	NAA10 (ENSOARG00020023246)	RENBP (ENSOARG00020023053)	HCFC1 (ENSOARG00020022415)	TMEM187 (ENSOARG00020022375)
Camelidae	ANCESTRAL SPECIES																	ENSGT00940000161880 #22
Arabian camel	MODERN SPECIES	204	SRPK3 (ENSCDRG00005020984)	ABCD1 (ENSCDRG00005020958)	BCAP31 (ENSCDRG00005020943)	ENSCDRG00005020937	PNCK (ENSCDRG00005020913)	CCNQ (ENSCDRG00005020899)	ATP2B3 (ENSCDRG00005020884)	BGN (ENSCDRG00005020868)	HAUS7 (ENSCDRG00005020839)	TREX2 (ENSCDRG00005020829)	ZFP92 (ENSCDRG00005020817)	ENSCDRG00005020767	ENSCDRG00005020729	ENSCDRG00005020724	ENSCDRG00005020712	ENSCDRG00005020708 #22	ENSCDRG00005020698	PNMA6A (ENSCDRG00005020688)	ENSCDRG00005020680	ZNF185 (ENSCDRG00005018034)	NSDHL (ENSCDRG00005017818)	CETN2 (ENSCDRG00005017787)	GABRQ (ENSCDRG00005017608)	GABRA3 (ENSCDRG00005017512)	MAGEA10 (ENSCDRG00005017492)	GABRE (ENSCDRG00005017444)	CNGA2 (ENSCDRG00005017401)	FATE1 (ENSCDRG00005017356)	PRRG3 (ENSCDRG00005017332)	ENSCDRG00005017295	GPR50 (ENSCDRG00005017269)
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Carnivora	ANCESTRAL SPECIES	11	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Caniformia	ANCESTRAL SPECIES	22	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Caniformia_b	ANCESTRAL SPECIES	27	ENSGT00940000162167	ENSGT00940000163823.e.b	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Ursidae	ANCESTRAL SPECIES	45	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C.b	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c.h	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Ursus	ANCESTRAL SPECIES	211							ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C.b	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000155869.v	ENSGT00390000011863.c.h	ENSGT00950000182955.a.b.a	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b
Polar bear	MODERN SPECIES	330								ENSUMAG00000021273	ENSUMAG00000021267	ENSUMAG00000021264	ENSUMAG00000021253	HAUS7 (ENSUMAG00000021248)	BGN (ENSUMAG00000021244)	ATP2B3 (ENSUMAG00000020942)	CCNQ (ENSUMAG00000020894)	DUSP9 (ENSUMAG00000020891) #22	ENSUMAG00000020857	BCAP31 (ENSUMAG00000020844)	SRPK3 (ENSUMAG00000020820)	IDH3G (ENSUMAG00000020814)	SSR4 (ENSUMAG00000020804)	NAA10 (ENSUMAG00000020773)	RENBP (ENSUMAG00000020768)	ENSUMAG00000020761	TMEM187 (ENSUMAG00000020759)	ENSUMAG00000020747	ENSUMAG00000020714	TEX28 (ENSUMAG00000020707)	TKTL1 (ENSUMAG00000020693)	EMD (ENSUMAG00000020684)	FLNA (ENSUMAG00000019645)
American black bear	MODERN SPECIES	6716																DUSP9 (ENSUAMG00000015423) #22
Giant Panda	MODERN SPECIES	2288	GABRE (ENSAMEG00000001520)	ENSAMEG00000012142	GABRQ (ENSAMEG00000024249)	CETN2 (ENSAMEG00000000364)	NSDHL (ENSAMEG00000000343)	ZNF185 (ENSAMEG00000000294)	ENSAMEG00000000291	ENSAMEG00000024870	ENSAMEG00000029889	ENSAMEG00000008936	TREX2 (ENSAMEG00000008933)	HAUS7 (ENSAMEG00000008916)	BGN (ENSAMEG00000008895)	ATP2B3 (ENSAMEG00000008798)	CCNQ (ENSAMEG00000008792)	DUSP9 (ENSAMEG00000023668) #22	PNCK (ENSAMEG00000008740)	BCAP31 (ENSAMEG00000008719)	ABCD1 (ENSAMEG00000008692)	PLXNB3 (ENSAMEG00000018468)	SRPK3 (ENSAMEG00000018467)	IDH3G (ENSAMEG00000018466)	SSR4 (ENSAMEG00000018465)	PDZD4 (ENSAMEG00000018464)	ENSAMEG00000009528	L1CAM (ENSAMEG00000018461)	AVPR2 (ENSAMEG00000018460)	ARHGAP4 (ENSAMEG00000018458)	NAA10 (ENSAMEG00000018457)	RENBP (ENSAMEG00000018452)	HCFC1 (ENSAMEG00000018450)
Mustelinae	ANCESTRAL SPECIES	108							ENSGT00390000001700.a.b.b	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
American mink	MODERN SPECIES	402								ENSNVIG00000024011	ENSNVIG00000024008	ENSNVIG00000024007	ZFP92 (ENSNVIG00000024006)	HAUS7 (ENSNVIG00000024002)	BGN (ENSNVIG00000023999)	ATP2B3 (ENSNVIG00000023990)	CCNQ (ENSNVIG00000023988)	DUSP9 (ENSNVIG00000023986) #22	PNCK (ENSNVIG00000023984)	ENSNVIG00000023983	BAP31 (ENSNVIG00000023982)	ABCD1 (ENSNVIG00000023981)	PLXNB3 (ENSNVIG00000023976)	SRPK3 (ENSNVIG00000023970)	IDH3G (ENSNVIG00000023966)	SSR4 (ENSNVIG00000023964)	PDZD4 (ENSNVIG00000023958)	L1CAM (ENSNVIG00000023921)	AVPR2 (ENSNVIG00000023918)	ARHGAP4 (ENSNVIG00000023893)	NAA10 (ENSNVIG00000023879)	RENBP (ENSNVIG00000023874)	HCFC1 (ENSNVIG00000023869)
Ferret	MODERN SPECIES	463				ENSMPUG00000019555	ENSMPUG00000019553	ENSMPUG00000016177	ZFP92 (ENSMPUG00000016176)	TREX2 (ENSMPUG00000019552)	HAUS7 (ENSMPUG00000016175)	ENSMPUG00000016174	BGN (ENSMPUG00000016173)	ATP2B3 (ENSMPUG00000016170)	CCNQ (ENSMPUG00000016164)	ENSMPUG00000016162	ENSMPUG00000016150	DUSP9 (ENSMPUG00000016151) #22	PNCK (ENSMPUG00000016148)	ENSMPUG00000016146	ENSMPUG00000019549	ENSMPUG00000019547	ENSMPUG00000019545	ENSMPUG00000016145	ENSMPUG00000019543	GAB3 (ENSMPUG00000016143)	MPP1 (ENSMPUG00000016141)	F8 (ENSMPUG00000016139)	DKC1 (ENSMPUG00000016136)	BRCC3 (ENSMPUG00000016134)	ENSMPUG00000016133	ENSMPUG00000016131	RAB39B (ENSMPUG00000016129)
Canidae	ANCESTRAL SPECIES	50	ENSGT00940000163823.e.b.a.b	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b.n	ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b.m.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Canis_lupus	ANCESTRAL SPECIES	22	ENSGT00940000155935.g	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b.n	ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b.m.b.a	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Dog	MODERN SPECIES	144	ENSCAFG00845022365	ENSCAFG00845022410	ENSCAFG00845022448	ENSCAFG00845022483	ENSCAFG00845022582	ENSCAFG00845022611	ENSCAFG00845022640	ENSCAFG00845022693	ENSCAFG00845022737	ENSCAFG00845022788	ENSCAFG00845022808	ZFP92 (ENSCAFG00845023007)	BGN (ENSCAFG00845023053)	ATP2B3 (ENSCAFG00845023172)	CCNQ (ENSCAFG00845023588)	DUSP9 (ENSCAFG00845023663) #22	ENSCAFG00845023730	ENSCAFG00845023957	BCAP31 (ENSCAFG00845024213)	ABCD1 (ENSCAFG00845024327)	PLXNB3 (ENSCAFG00845024556)	SRPK3 (ENSCAFG00845024967)	IDH3G (ENSCAFG00845025145)	SSR4 (ENSCAFG00845025375)	PDZD4 (ENSCAFG00845025486)	L1CAM (ENSCAFG00845025647)	AVPR2 (ENSCAFG00845026015)	ARHGAP4 (ENSCAFG00845026108)	RENBP (ENSCAFG00845026554)	HCFC1 (ENSCAFG00845026790)	TMEM187 (ENSCAFG00845027090)
Dingo	MODERN SPECIES	383	ENSCAFG00020023229	GABRQ (ENSCAFG00020023222)	ENSCAFG00020023218	NSDHL (ENSCAFG00020023215)	ZNF185 (ENSCAFG00020023207)	ENSCAFG00020023204	ENSCAFG00020023200	ENSCAFG00020023197	ENSCAFG00020023196	ENSCAFG00020023194	TREX2 (ENSCAFG00020023190)	HAUS7 (ENSCAFG00020023188)	BGN (ENSCAFG00020023184)	ATP2B3 (ENSCAFG00020022993)	CCNQ (ENSCAFG00020022953)	DUSP9 (ENSCAFG00020022952) #22	PNCK (ENSCAFG00020022950)	ENSCAFG00020022949	BCAP31 (ENSCAFG00020022946)	ABCD1 (ENSCAFG00020022942)	PLXNB3 (ENSCAFG00020022936)	SRPK3 (ENSCAFG00020022932)	IDH3G (ENSCAFG00020022931)	SSR4 (ENSCAFG00020022930)	PDZD4 (ENSCAFG00020022928)	L1CAM (ENSCAFG00020022925)	AVPR2 (ENSCAFG00020022923)	ARHGAP4 (ENSCAFG00020022156)	NAA10 (ENSCAFG00020022123)	RENBP (ENSCAFG00020022111)	HCFC1 (ENSCAFG00020022091)
Red fox	MODERN SPECIES	263							ENSVVUG00000029721	ENSVVUG00000029719	ENSVVUG00000029716	ZFP92 (ENSVVUG00000029715)	TREX2 (ENSVVUG00000029714)	HAUS7 (ENSVVUG00000029713)	BGN (ENSVVUG00000029707)	ATP2B3 (ENSVVUG00000029706)	CCNQ (ENSVVUG00000029705)	DUSP9 (ENSVVUG00000029702) #22	PNCK (ENSVVUG00000029700)	ENSVVUG00000029699	ENSVVUG00000029696	ENSVVUG00000029695	ENSVVUG00000029694	PLXNB3 (ENSVVUG00000029634)	IDH3G (ENSVVUG00000029622)	ENSVVUG00000029621	PDZD4 (ENSVVUG00000029620)	L1CAM (ENSVVUG00000029611)	AVPR2 (ENSVVUG00000029607)	ARHGAP4 (ENSVVUG00000029605)	NAA10 (ENSVVUG00000029603)	RENBP (ENSVVUG00000029602)	HCFC1 (ENSVVUG00000029596)
Felidae	ANCESTRAL SPECIES	29								ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Panthera	ANCESTRAL SPECIES	56								ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Panthera_a	ANCESTRAL SPECIES	65								ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
lion	MODERN SPECIES	50											TREX2 (ENSPLOG00000017143)	ENSPLOG00000017109	BGN (ENSPLOG00000017044)	ATP2B3 (ENSPLOG00000016345)	CCNQ (ENSPLOG00000016196)	DUSP9 (ENSPLOG00000016155) #22	PNCK (ENSPLOG00000015960)	ENSPLOG00000015847	BCAP31 (ENSPLOG00000015741)	ABCD1 (ENSPLOG00000015686)	PLXNB3 (ENSPLOG00000015318)	SRPK3 (ENSPLOG00000014529)	IDH3G (ENSPLOG00000014245)	SSR4 (ENSPLOG00000014154)	PDZD4 (ENSPLOG00000013907)	L1CAM (ENSPLOG00000013396)	AVPR2 (ENSPLOG00000013280)	ARHGAP4 (ENSPLOG00000012775)	NAA10 (ENSPLOG00000012684)	RENBP (ENSPLOG00000012442)	HCFC1 (ENSPLOG00000011916)
leopard	MODERN SPECIES	214									ENSPPRG00000013055	ENSPPRG00000013646	TREX2 (ENSPPRG00000017457)	HAUS7 (ENSPPRG00000014451)	BGN (ENSPPRG00000014620)	ATP2B3 (ENSPPRG00000024167)	CCNQ (ENSPPRG00000024044)	DUSP9 (ENSPPRG00000023875) #22	ENSPPRG00000000433	PNCK (ENSPPRG00000002563)	ENSPPRG00000002840	BCAP31 (ENSPPRG00000003191)	ABCD1 (ENSPPRG00000003214)	SRPK3 (ENSPPRG00000006472)	IDH3G (ENSPPRG00000007090)	SSR4 (ENSPPRG00000007302)	PDZD4 (ENSPPRG00000007757)	L1CAM (ENSPPRG00000010911)	ENSPPRG00000011145	AVPR2 (ENSPPRG00000011559)	ARHGAP4 (ENSPPRG00000019046)	NAA10 (ENSPPRG00000021297)	RENBP (ENSPPRG00000000874)
Cat	MODERN SPECIES	252	GABRA3 (ENSFCAG00000018801)	GABRQ (ENSFCAG00000003846)	ENSFCAG00000052762	CETN2 (ENSFCAG00000004901)	NSDHL (ENSFCAG00000004907)	ZNF185 (ENSFCAG00000004911)	ENSFCAG00000052684	PNMA3 (ENSFCAG00000003125)	ENSFCAG00000041838	ENSFCAG00000052212	ENSFCAG00000004665	TREX2 (ENSFCAG00000018938)	HAUS7 (ENSFCAG00000004027)	ATP2B3 (ENSFCAG00000004031)	CCNQ (ENSFCAG00000004033)	DUSP9 (ENSFCAG00000004034) #22	PNCK (ENSFCAG00000004035)	ENSFCAG00000004036	BCAP31 (ENSFCAG00000004037)	ABCD1 (ENSFCAG00000004038)	PLXNB3 (ENSFCAG00000004039)	SRPK3 (ENSFCAG00000043991)	IDH3G (ENSFCAG00000033410)	SSR4 (ENSFCAG00000004040)	ARHGAP4 (ENSFCAG00000011385)	L1CAM (ENSFCAG00000008614)	AVPR2 (ENSFCAG00000011384)	NAA10 (ENSFCAG00000028705)	RENBP (ENSFCAG00000018690)	HCFC1 (ENSFCAG00000011387)	TMEM187 (ENSFCAG00000011388)
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Equus	ANCESTRAL SPECIES	52	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.hb.b	ENSGT00390000001700.a.b.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.ib	ENSGT00940000162887	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Horse	MODERN SPECIES	480	ZNF185 (ENSECAG00000010142)	PNMA5 (ENSECAG00000000960)	ENSECAG00000031829	PNMA3 (ENSECAG00000000991)	ENSECAG00000035483	ENSECAG00000056746	ENSECAG00000030904	ENSECAG00000028315	ENSECAG00000014611	ZFP92 (ENSECAG00000015856)	HAUS7 (ENSECAG00000016027)	ECMX (ENSECAG00000018701)	BGN (ENSECAG00000018717)	ATP2B3 (ENSECAG00000023490)	CCNQ (ENSECAG00000026922)	DUSP9 (ENSECAG00000013650) #22	PNCK (ENSECAG00000036146)	SLC6A8 (ENSECAG00000013965)	BCAP31 (ENSECAG00000022787)	ABCD1 (ENSECAG00000022935)	PLXNB3 (ENSECAG00000000639)	SRPK3 (ENSECAG00000058187)	IDH3G (ENSECAG00000018509)	SSR4 (ENSECAG00000023150)	PDZD4 (ENSECAG00000024310)	L1CAM (ENSECAG00000002810)	AVPR2 (ENSECAG00000022974)	ARHGAP4 (ENSECAG00000023201)	NAA10 (ENSECAG00000015203)	RENBP (ENSECAG00000018888)	HCFC1 (ENSECAG00000022440)
Donkey	MODERN SPECIES	36	ENSEASG00005025853	ENSEASG00005023777	ENSEASG00005028277	ENSEASG00005019400	ENSEASG00005031334	ENSEASG00005033113	ENSEASG00005026052	ENSEASG00005035618	ENSEASG00005023652	ENSEASG00005036517	TREX2 (ENSEASG00005019558)	HAUS7 (ENSEASG00005019556)	BGN (ENSEASG00005035268)	ATP2B3 (ENSEASG00005019538)	CCNQ (ENSEASG00005019537)	DUSP9 (ENSEASG00005019536) #22	PNCK (ENSEASG00005019534)	ENSEASG00005019533	BCAP31 (ENSEASG00005019531)	ABCD1 (ENSEASG00005019529)	PLXNB3 (ENSEASG00005019471)	SRPK3 (ENSEASG00005019451)	IDH3G (ENSEASG00005019382)	SSR4 (ENSEASG00005019363)	PDZD4 (ENSEASG00005028120)	L1CAM (ENSEASG00005019353)	AVPR2 (ENSEASG00005027808)	ARHGAP4 (ENSEASG00005019296)	NAA10 (ENSEASG00005030165)	RENBP (ENSEASG00005019286)	HCFC1 (ENSEASG00005019244)
Chiroptera	ANCESTRAL SPECIES	48	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00910000144363	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT00910000146500	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Megabat	MODERN SPECIES	4214																DUSP9 (ENSPVAG00000012345) #22
Microchiroptera	ANCESTRAL SPECIES	45	ENSGT00940000159444	ENSGT00940000162167	ENSGT00910000144363	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869.v	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Greater horseshoe bat	MODERN SPECIES		ENSRFEG00010006156	CETN2 (ENSRFEG00010006124)	NSDHL (ENSRFEG00010006063)	ZNF185 (ENSRFEG00010005969)	PNMA3 (ENSRFEG00010005848)	ENSRFEG00010005818	ENSRFEG00010005799	ENSRFEG00010005753	ENSRFEG00010005702	ENSRFEG00010005686	ENSRFEG00010005660	HAUS7 (ENSRFEG00010005503)	BGN (ENSRFEG00010005401)	ATP2B3 (ENSRFEG00010005284)	CCNQ (ENSRFEG00010005249)	DUSP9 (ENSRFEG00010005234) #22	PNCK (ENSRFEG00010005195)	ENSRFEG00010005165	BCAP31 (ENSRFEG00010005136)	ABCD1 (ENSRFEG00010005067)	PLXNB3 (ENSRFEG00010005005)	SRPK3 (ENSRFEG00010004974)	IDH3G (ENSRFEG00010004950)	SSR4 (ENSRFEG00010004934)	PDZD4 (ENSRFEG00010004912)	L1CAM (ENSRFEG00010004838)	ENSRFEG00010004798	AVPR2 (ENSRFEG00010004785)	ARHGAP4 (ENSRFEG00010004760)	ARD1A (ENSRFEG00010004730)	RENBP (ENSRFEG00010004689)
Microbat	MODERN SPECIES	977	ENSMLUG00000014520	NSDHL (ENSMLUG00000014525)	ZNF185 (ENSMLUG00000015980)	ENSMLUG00000022293	ENSMLUG00000025329	ENSMLUG00000023246	ENSMLUG00000025774	ENSMLUG00000006827	ENSMLUG00000028854	TREX2 (ENSMLUG00000027143)	ENSMLUG00000010516	ENSMLUG00000025983	ENSMLUG00000010569	ATP2B3 (ENSMLUG00000010583)	CCNQ (ENSMLUG00000012844)	DUSP9 (ENSMLUG00000008666) #22	PNCK (ENSMLUG00000008649)	ENSMLUG00000004391	BCAP31 (ENSMLUG00000004416)	ABCD1 (ENSMLUG00000004423)	PLXNB3 (ENSMLUG00000004428)	SRPK3 (ENSMLUG00000004445)	ENSMLUG00000004457	SSR4 (ENSMLUG00000004462)	PDZD4 (ENSMLUG00000004464)	L1CAM (ENSMLUG00000014234)	AVPR2 (ENSMLUG00000014253)	ARHGAP4 (ENSMLUG00000014257)	NAA10 (ENSMLUG00000014267)	RENBP (ENSMLUG00000014271)	HCFC1 (ENSMLUG00000014275)
Atlantogenata	ANCESTRAL SPECIES	70		ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000154411.`b.i.f	ENSGT01100000263534.b.k.a.b.b	ENSGT01100000263507.D.a.a.b.a	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196
Afrotheria	ANCESTRAL SPECIES	82								ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196
Afrotheria_a	ANCESTRAL SPECIES	81								ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000012715.a	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196
Elephant	MODERN SPECIES	50								ENSLAFG00000027476	ENSLAFG00000026228	ENSLAFG00000022395	TREX2 (ENSLAFG00000025805)	BGN (ENSLAFG00000002207)	ATP2B3 (ENSLAFG00000002208)	CCNQ (ENSLAFG00000029369)	HAUS7 (ENSLAFG00000005743)	DUSP9 (ENSLAFG00000031085) #22	PNCK (ENSLAFG00000013695)	ENSLAFG00000012168	BCAP31 (ENSLAFG00000022717)	ABCD1 (ENSLAFG00000027794)	PLXNB3 (ENSLAFG00000002638)	SRPK3 (ENSLAFG00000006899)	IDH3G (ENSLAFG00000006904)	SSR4 (ENSLAFG00000006908)	PDZD4 (ENSLAFG00000025865)	L1CAM (ENSLAFG00000021925)	AVPR2 (ENSLAFG00000027738)	ARHGAP4 (ENSLAFG00000014809)	NAA10 (ENSLAFG00000007025)	RENBP (ENSLAFG00000007027)	ENSLAFG00000028984
Tenrec	MODERN SPECIES	9696																ENSETEG00000008182 #22
Marsupialia	ANCESTRAL SPECIES	40						ENSGT00940000164372	ENSGT00940000164592	ENSGT01060000248564.b.a.b.b	ENSGT00390000003937.c.b	ENSGT00390000012715.a	ENSGT00390000003937.c.a	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c.b	ENSGT00390000011863.c.a.a	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.b	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00390000016224.j.a	ENSGT00550000074803
Opossum	MODERN SPECIES	627	EDA2R (ENSMODG00000012440)	ENSMODG00000012445	ENSMODG00000027338	ENSMODG00000043924	ENSMODG00000012459	ENSMODG00000012465	ENSMODG00000012494	ENSMODG00000007462	ENSMODG00000022849	ENSMODG00000029017	ENSMODG00000050925	ENSMODG00000007539	ENSMODG00000022847	ENSMODG00000008043	ATP2B3 (ENSMODG00000008152)	DUSP9 (ENSMODG00000008174) #22	PNCK (ENSMODG00000008192)	ENSMODG00000008271	BCAP31 (ENSMODG00000008300)	ABCD1 (ENSMODG00000008330)	PLXNB3 (ENSMODG00000008407)	SRPK3 (ENSMODG00000039232)	ENSMODG00000008568	SSR4 (ENSMODG00000008581)	PDZD4 (ENSMODG00000008596)	L1CAM (ENSMODG00000008677)	ENSMODG00000002236	ENSMODG00000047866	DNAAF6 (ENSMODG00000002249)	ENSMODG00000002278	ENSMODG00000050281
Marsupialia_b	ANCESTRAL SPECIES	37						ENSGT00940000164372	ENSGT00940000164592	ENSGT01060000248564.b.a.b.b	ENSGT00390000003937.c.b	ENSGT00390000012715.a	ENSGT00390000003937.c.a	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.b	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00390000016224.j.a	ENSGT00550000074803	ENSGT00390000013740
Diprotodontia	ANCESTRAL SPECIES	81						ENSGT00940000164372	ENSGT00940000164592	ENSGT01060000248564.b.a.b.b	ENSGT00390000003937.c.b	ENSGT00390000012715.a	ENSGT00390000003937.c.a	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.b	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00390000016224.j.a	ENSGT00550000074803	ENSGT00390000013740
Diprotodontia_a	ANCESTRAL SPECIES	79						ENSGT00940000164372	ENSGT00940000164592	ENSGT01060000248564.b.a.b.b	ENSGT00390000003937.c.b	ENSGT00390000012715.a	ENSGT00390000003937.c.a.a	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.b	ENSGT00390000008992.a	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00390000016224.j.a	ENSGT00550000074803	ENSGT00390000013740
Common wonbat	MODERN SPECIES	1157															ATP2B3 (ENSVURG00010020897)	DUSP9 (ENSVURG00010020940) #22	PNCK (ENSVURG00010020947)	ENSVURG00010020979	BCAP31 (ENSVURG00010020986)	ABCD1 (ENSVURG00010021008)	PLXNB3 (ENSVURG00010021147)	SRPK3 (ENSVURG00010021162)	ENSVURG00010021172	ENSVURG00010021186	PDZD4 (ENSVURG00010021202)	L1CAM (ENSVURG00010021232)	AVPR2 (ENSVURG00010021274)	ARHGAP4 (ENSVURG00010021281)	ENSVURG00010021294	NAA10 (ENSVURG00010021302)	RENBP (ENSVURG00010021310)
koala	MODERN SPECIES	310					ENSPCIG00000011061	ENSPCIG00000034875	ENSPCIG00000000101	ENSPCIG00000000183	ENSPCIG00000034352	TREX2 (ENSPCIG00000009700)	ENSPCIG00000033247	ENSPCIG00000010240	ENSPCIG00000001499	BGN (ENSPCIG00000016827)	ATP2B3 (ENSPCIG00000008574)	DUSP9 (ENSPCIG00000017701) #22	ENSPCIG00000017699	ENSPCIG00000017698	BCAP31 (ENSPCIG00000017694)	ABCD1 (ENSPCIG00000017689)	PLXNB3 (ENSPCIG00000016447)	SRPK3 (ENSPCIG00000016407)	ENSPCIG00000016406	ENSPCIG00000016404	PDZD4 (ENSPCIG00000016403)	L1CAM (ENSPCIG00000003277)	AVPR2 (ENSPCIG00000012251)	ARHGAP4 (ENSPCIG00000012250)	ENSPCIG00000037377	NAA10 (ENSPCIG00000035783)	RENBP (ENSPCIG00000016399)
Wallaby	MODERN SPECIES	14571																ENSMEUG00000003454 #22
Tasmanian devil	MODERN SPECIES	21	CLDN2 (ENSSHAG00000032255)	ENSSHAG00000021575	ENSSHAG00000002285	ENSSHAG00000002038	ENSSHAG00000005765	ENSSHAG00000001308	ENSSHAG00000002527	ENSSHAG00000021923	ENSSHAG00000021553	ENSSHAG00000028821	ENSSHAG00000025093	ENSSHAG00000021114	ENSSHAG00000001909	BGN (ENSSHAG00000030752)	ATP2B3 (ENSSHAG00000005720)	DUSP9 (ENSSHAG00000007865) #22	PNCK (ENSSHAG00000008570)	ENSSHAG00000009030	ENSSHAG00000009111	ENSSHAG00000009362	PLXNB3 (ENSSHAG00000009796)	SRPK3 (ENSSHAG00000000037)	ENSSHAG00000001102	SSR4 (ENSSHAG00000021208)	PDZD4 (ENSSHAG00000000157)	L1CAM (ENSSHAG00000003280)	AVPR2 (ENSSHAG00000004862)	ENSSHAG00000005769	ARHGAP4 (ENSSHAG00000004979)	NAA10 (ENSSHAG00000005952)	RENBP (ENSSHAG00000006063)
Platypus	MODERN SPECIES	17	FAM120C (ENSOANG00000000710)	WNK3 (ENSOANG00000000708)	TSR2 (ENSOANG00000000707)	FGD1 (ENSOANG00000000703)	GNL3L (ENSOANG00000000700)	ENSOANG00000000695	ENSOANG00000020339	PFKFB1 (ENSOANG00000000691)	APEX2 (ENSOANG00000040218)	ALAS2 (ENSOANG00000000687)	TREX2 (ENSOANG00000000686)	ENSOANG00000029619	BGN (ENSOANG00000000684)	ATP2B3 (ENSOANG00000000679)	CCNQ (ENSOANG00000000678)	DUSP9 (ENSOANG00000005316) #22	PNCK (ENSOANG00000036709)	ENSOANG00000010213	BCAP31 (ENSOANG00000010212)	ABCD1 (ENSOANG00000041560)	PLXNB3 (ENSOANG00000005185)	SRPK3 (ENSOANG00000005184)	IDH3G (ENSOANG00000005183)	SSR4 (ENSOANG00000036977)	PDZD4 (ENSOANG00000005181)	L1CAM (ENSOANG00000009415)	AVPR2 (ENSOANG00000005890)	ENSOANG00000005889	ARHGAP4 (ENSOANG00000005180)	NAA10 (ENSOANG00000002893)	RENBP (ENSOANG00000002892)
Sauria	ANCESTRAL SPECIES	13	ENSGT00390000008983.a	ENSGT01030000237821	ENSGT00940000155071.E	ENSGT00940000158384	ENSGT00940000154861	ENSGT00940000157717	ENSGT01030000234648.a.a.d	ENSGT00940000158813	ENSGT00440000038003	ENSGT00940000163873.l	ENSGT00940000163873.k	ENSGT00390000003937	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000183006.A.a.b	ENSGT00950000183006.B.f.b.b	ENSGT01050000244882.a.a.b	ENSGT00390000011230
Lepidosauria	ANCESTRAL SPECIES	38	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00940000153588.b	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Episquamata	ANCESTRAL SPECIES	23	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00940000153588.b	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00550000074803	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00940000153588.b	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Elapidae	ANCESTRAL SPECIES	21	ENSGT00550000074803	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506.a	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00940000153588.b	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Indian cobra	MODERN SPECIES	1	ARHGAP4 (ENSNNAG00000018669)	CAV3 (ENSNNAG00000018661)	ENSNNAG00000018657	AVPR2 (ENSNNAG00000018655)	L1CAM (ENSNNAG00000018628)	ENSNNAG00000018620	ENSNNAG00000018618	ENSNNAG00000018610	SSR4 (ENSNNAG00000018601)	ENSNNAG00000018599	FLNA (ENSNNAG00000010196)	HAUS7 (ENSNNAG00000008940)	BGN (ENSNNAG00000008914)	ATP2B3 (ENSNNAG00000007314)	CCNQ (ENSNNAG00000007203)	DUSP9 (ENSNNAG00000007195) #22	PNCK (ENSNNAG00000007117)	ENSNNAG00000004889	BCAP31 (ENSNNAG00000004742)	ABCD1 (ENSNNAG00000004643)	ENSNNAG00000004620	ENSNNAG00000004602	ENSNNAG00000018745	ENSNNAG00000018733	ENSNNAG00000018721	IDH3G (ENSNNAG00000018712)	ENSNNAG00000018704	DNASE1L1 (ENSNNAG00000018696)	TAFAZZIN (ENSNNAG00000018691)	ATP6AP1 (ENSNNAG00000018685)	GDI1 (ENSNNAG00000018677)
Elapidae_a	ANCESTRAL SPECIES	23	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506.a	ENSGT00940000157506.b	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00940000153588.b	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a.f	ENSGT00950000182955.a.b.a.e	ENSGT01020000230394.e.a.a.b.a.b.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C
Acanthophiinae	ANCESTRAL SPECIES	23	ENSGT00550000074803	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506.a	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00940000153588.b	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a.f	ENSGT00950000182955.a.b.a.e	ENSGT01020000230394.e.a.a.b.a.b.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C
Eastern brown snake	MODERN SPECIES	52	RENBP (ENSPTXG00000004959)	NAA10 (ENSPTXG00000004961)	ENSPTXG00000004963	ARHGAP4 (ENSPTXG00000004965)	CAV3 (ENSPTXG00000004995)	ENSPTXG00000004997	AVPR2 (ENSPTXG00000004998)	L1CAM (ENSPTXG00000004999)	PDZD4 (ENSPTXG00000005007)	SSR4 (ENSPTXG00000005008)	FLNA (ENSPTXG00000005011)	HAUS7 (ENSPTXG00000005012)	BGN (ENSPTXG00000005013)	ATP2B3 (ENSPTXG00000005014)	CCNQ (ENSPTXG00000005700)	DUSP9 (ENSPTXG00000005701) #22	PNCK (ENSPTXG00000005709)	ENSPTXG00000005710	BCAP31 (ENSPTXG00000005711)	ENSPTXG00000005712	ENSPTXG00000005713	PLXNB3 (ENSPTXG00000005731)	SRPK3 (ENSPTXG00000007997)	IDH3G (ENSPTXG00000007998)	ENSPTXG00000007999	ENSPTXG00000006589	DNASE1L1 (ENSPTXG00000006590)	TAFAZZIN (ENSPTXG00000006591)	ATP6AP1 (ENSPTXG00000006592)	GDI1 (ENSPTXG00000006593)	ENSPTXG00000006594
Mainland tiger snake	MODERN SPECIES	81	NAA10 (ENSNSUG00000014942)	ENSNSUG00000014943	ARHGAP4 (ENSNSUG00000014999)	CAV3 (ENSNSUG00000015005)	ENSNSUG00000015006	AVPR2 (ENSNSUG00000015007)	L1CAM (ENSNSUG00000015009)	PDZD4 (ENSNSUG00000015010)	SSR4 (ENSNSUG00000015011)	FLNA (ENSNSUG00000015014)	HAUS7 (ENSNSUG00000015675)	ENSNSUG00000015676	BGN (ENSNSUG00000015677)	ATP2B3 (ENSNSUG00000015687)	CCNQ (ENSNSUG00000015690)	DUSP9 (ENSNSUG00000015691) #22	PNCK (ENSNSUG00000015692)	ENSNSUG00000015693	ENSNSUG00000015694	BCAP31 (ENSNSUG00000015695)	ENSNSUG00000015696	ENSNSUG00000015697	ENSNSUG00000015698	ENSNSUG00000015699	SRPK3 (ENSNSUG00000015700)	IDH3G (ENSNSUG00000015701)	ENSNSUG00000015702	ENSNSUG00000015704	DNASE1L1 (ENSNSUG00000015705)	TAFAZZIN (ENSNSUG00000015706)	ATP6AP1 (ENSNSUG00000015714)
Blue-lipped sea krait	MODERN SPECIES	2741																DUSP9 (ENSLLTG00000002032) #22	PNCK (ENSLLTG00000001996)	ENSLLTG00000001970
Lizard	MODERN SPECIES	1	NAA10 (ENSACAG00000012233)	ENSACAG00000012219	ARHGAP4 (ENSACAG00000011924)	CAV3 (ENSACAG00000040122)	ENSACAG00000011878	AVPR2 (ENSACAG00000021016)	L1CAM (ENSACAG00000011487)	ENSACAG00000040437	PDZD4 (ENSACAG00000036143)	SSR4 (ENSACAG00000011328)	ENSACAG00000009800	HAUS7 (ENSACAG00000009779)	BGN (ENSACAG00000009615)	ATP2B3 (ENSACAG00000009210)	CCNQ (ENSACAG00000009190)	DUSP9 (ENSACAG00000009178) #22	ENSACAG00000044476	PNCK (ENSACAG00000008973)	ENSACAG00000008691	ENSACAG00000045378	BCAP31 (ENSACAG00000008629)	ABCD1 (ENSACAG00000008539)	ENSACAG00000029519	PLXNB3 (ENSACAG00000008378)	SRPK3 (ENSACAG00000008280)	IDH3G (ENSACAG00000008220)	ENSACAG00000008192	ENSACAG00000026130	ENSACAG00000008098	ENSACAG00000007871	ENSACAG00000007823
Laterata	ANCESTRAL SPECIES	7	ENSGT00550000074803	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00940000153588.b	ENSGT00390000003937	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a	ENSGT00410000025802
Common wall lizard	MODERN SPECIES	8	ARHGAP4 (ENSPMRG00000021373)	CAV3 (ENSPMRG00000021320)	ENSPMRG00000021311	AVPR2 (ENSPMRG00000021305)	ENSPMRG00000021296	ENSPMRG00000021287	L1CAM (ENSPMRG00000021230)	PDZD4 (ENSPMRG00000021208)	SSR4 (ENSPMRG00000021193)	ENSPMRG00000021190	FLNA (ENSPMRG00000021086)	HAUS7 (ENSPMRG00000021057)	BGN (ENSPMRG00000021052)	ATP2B3 (ENSPMRG00000023951)	CCNQ (ENSPMRG00000023950)	DUSP9 (ENSPMRG00000023948) #22	PNCK (ENSPMRG00000023947)	ENSPMRG00000023946	BCAP31 (ENSPMRG00000023945)	ABCD1 (ENSPMRG00000023944)	PLXNB3 (ENSPMRG00000023943)	SRPK3 (ENSPMRG00000023942)	IDH3G (ENSPMRG00000023941)	ENSPMRG00000023939	DNASE1L1 (ENSPMRG00000023938)	TAFAZZIN (ENSPMRG00000023937)	ATP6AP1 (ENSPMRG00000023936)	GDI1 (ENSPMRG00000023935)	ENSPMRG00000023934	PLXNA3 (ENSPMRG00000023922)	ENSPMRG00000023892
Argentine black and white tegu	MODERN SPECIES	12	ENSSMRG00000002333	NAA10 (ENSSMRG00000002335)	ENSSMRG00000002344	ARHGAP4 (ENSSMRG00000002350)	CAV3 (ENSSMRG00000002372)	ENSSMRG00000002373	AVPR2 (ENSSMRG00000002377)	L1CAM (ENSSMRG00000002421)	PDZD4 (ENSSMRG00000002457)	FLNA (ENSSMRG00000002470)	HAUS7 (ENSSMRG00000002500)	ENSSMRG00000002504	BGN (ENSSMRG00000002508)	ATP2B3 (ENSSMRG00000002530)	CCNQ (ENSSMRG00000002583)	DUSP9 (ENSSMRG00000002591) #22	PNCK (ENSSMRG00000002638)	ENSSMRG00000002650	BCAP31 (ENSSMRG00000002653)	ABCD1 (ENSSMRG00000002654)	PLXNB3 (ENSSMRG00000002754)	SRPK3 (ENSSMRG00000002758)	IDH3G (ENSSMRG00000002761)	ENSSMRG00000002764	DNASE1L1 (ENSSMRG00000002768)	TAFAZZIN (ENSSMRG00000002769)	ATP6AP1 (ENSSMRG00000002776)	GDI1 (ENSSMRG00000002779)	ENSSMRG00000002783	PLXNA3 (ENSSMRG00000002851)	ENSSMRG00000002873
tuatara	MODERN SPECIES	315																DUSP9 (ENSSPUG00000002001) #22
Archelosauria	ANCESTRAL SPECIES	75													ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Cryptodira	ANCESTRAL SPECIES	95													ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a
Testudinoidea	ANCESTRAL SPECIES	51					ENSGT00390000011272	ENSGT00940000160502	ENSGT00530000063687.b.b.b.j	ENSGT01030000234549.a.a.a.a.a.a	ENSGT01030000234549.a.a.a.b	ENSGT00940000161969	ENSGT01060000248768	ENSGT00940000154471.a.a	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a.g	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT00940000165180	ENSGT00530000063435.a
Testudinidae	ANCESTRAL SPECIES	82													ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a.g	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT00940000165180.g	ENSGT00530000063435.a
Goode s thornscrub tortoise	MODERN SPECIES	194			L1CAM (ENSGEVG00005019079)	ENSGEVG00005019065	IDH3G (ENSGEVG00005019054)	TMEM187 (ENSGEVG00005019030)	IRAK1 (ENSGEVG00005018287)	MECP2 (ENSGEVG00005018139)	ENSGEVG00005018118	TKTL2 (ENSGEVG00005017921)	ENSGEVG00005017874	ENSGEVG00005017852	BGN (ENSGEVG00005017820)	ATP2B3 (ENSGEVG00005016987)	CCNQ (ENSGEVG00005016840)	DUSP9 (ENSGEVG00005016821) #22	ENSGEVG00005016786
Abingdon island giant tortoise	MODERN SPECIES	1863														ATP2B3 (ENSCABG00000022671)	ENSCABG00000022664	DUSP9 (ENSCABG00000022663) #22	FLNA (ENSCABG00000016076)	ENSCABG00000015472	ENSCABG00000015469	DNASE1L1 (ENSCABG00000015466)	ATP6AP1 (ENSCABG00000015464)	GDI1 (ENSCABG00000015246)	ENSCABG00000015173
Emydidae	ANCESTRAL SPECIES	99														ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a.g	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT00940000165180.i	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a
painted turtle	MODERN SPECIES	1100														ATP2B3 (ENSCPBG00000014832)	CCNQ (ENSCPBG00000015958)	DUSP9 (ENSCPBG00000015962) #22	FLNA (ENSCPBG00000015968)	ENSCPBG00000015988	ENSCPBG00000015995	DNASE1L1 (ENSCPBG00000015997)	TAFAZZIN (ENSCPBG00000016003)	ATP6AP1 (ENSCPBG00000016015)	GDI1 (ENSCPBG00000016047)	ENSCPBG00000017165	ENSCPBG00000017169	ENSCPBG00000017177	ENSCPBG00000017179	FAM3A (ENSCPBG00000017182)	UBL4A (ENSCPBG00000017185)	ENSCPBG00000017187	ENSCPBG00000017191
Three-toed box turtle	MODERN SPECIES	259																DUSP9 (ENSTMTG00000011433) #22
Anura	ANCESTRAL SPECIES	249											ENSGT00950000182846.a.b	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b
Leishan spiny toad	MODERN SPECIES	12	ENSLLEG00000016072	ENSLLEG00000015985	ENSLLEG00000015931	ENSLLEG00000015885	ALAS2 (ENSLLEG00000015720)	APEX2 (ENSLLEG00000015467)	PFKFB1 (ENSLLEG00000015025)	ENSLLEG00000014898	ENSLLEG00000014743	ENSLLEG00000014665	ENSLLEG00000014514	BGN (ENSLLEG00000014316)	ENSLLEG00000014240	ATP2B3 (ENSLLEG00000030285)	CCNQ (ENSLLEG00000030219)	DUSP9 (ENSLLEG00000030195) #22	ENSLLEG00000030187	PNCK (ENSLLEG00000030165)	ENSLLEG00000030075	BCAP31 (ENSLLEG00000029981)	ABCD1 (ENSLLEG00000029377)	PLXNB3 (ENSLLEG00000028671)	ST6GALNAC4 (ENSLLEG00000028566)	ENSLLEG00000028550	PHF8 (ENSLLEG00000028501)	ENSLLEG00000028484	FAM120C (ENSLLEG00000028450)	WNK3 (ENSLLEG00000028345)	TSR2 (ENSLLEG00000028315)	SRPK3 (ENSLLEG00000028215)	IDH3G (ENSLLEG00000027844)
Frog	MODERN SPECIES	8	bbln (ENSXETG00000035874)	ptges2 (ENSXETG00000012893)	sh3glb2 (ENSXETG00000012895)	nup188 (ENSXETG00000012903)	dolk (ENSXETG00000024754)	phyhd1 (ENSXETG00000012919)	lrrc8a (ENSXETG00000012899)	kyat1 (ENSXETG00000012909)	golga2 (ENSXETG00000012915)	dnase1 (ENSXETG00000012928)	ENSXETG00000046713	ecm2.2 (ENSXETG00000012932)	bgn (ENSXETG00000012934)	atp2b3 (ENSXETG00000030920)	ccnq (ENSXETG00000007696)	idh3b (ENSXETG00000007698) #22	gnl3l (ENSXETG00000007700)	pnck (ENSXETG00000007699)	slc6a8 (ENSXETG00000007703)	bcap31 (ENSXETG00000024749)	abcd1 (ENSXETG00000007705)	plxnb3 (ENSXETG00000007706)	smc1a (ENSXETG00000024747)	wnt7c (ENSXETG00000007719)	syp (ENSXETG00000007721)	prickle3 (ENSXETG00000030869)	plp2 (ENSXETG00000043070)	gpkow (ENSXETG00000007727)	naif1 (ENSXETG00000007730)	slc25a25 (ENSXETG00000007731)	col27a1 (ENSXETG00000021972)
Coelacanth	MODERN SPECIES	76																ENSLACG00000000437 #22
Actinopterygii	ANCESTRAL SPECIES	449											ENSGT00940000153541.B	ENSGT00940000164248	ENSGT00940000155311.C	ENSGT00940000165254.c.b	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00390000003937
Neopterygii	ANCESTRAL SPECIES	521													ENSGT00390000003937	ENSGT00940000165254.c.b	ENSGT00940000155445	ENSGT00940000161880 #22
Spotted gar	MODERN SPECIES	647	ENSLOCG00000015583	ENSLOCG00000015581	zgc:56596 (ENSLOCG00000015578)	zgc:100918 (ENSLOCG00000015576)	wdr45 (ENSLOCG00000015571)	ENSLOCG00000015567	ENSLOCG00000015565	tktb (ENSLOCG00000015562)	ENSLOCG00000015560	ENSLOCG00000015558	ENSLOCG00000015557	ENSLOCG00000015554	HAUS7 (ENSLOCG00000015550)	atp2b3a (ENSLOCG00000015538)	ccnq (ENSLOCG00000015536)	DUSP9 (ENSLOCG00000015534) #22	ENSLOCG00000015533	cfap126 (ENSLOCG00000015532)	dedd (ENSLOCG00000015531)	ENSLOCG00000015529	ENSLOCG00000015527	ENSLOCG00000015526	tnnc1b (ENSLOCG00000015523)	si:dkey-6n6.1 (ENSLOCG00000015522)	bgna (ENSLOCG00000015519)	ENSLOCG00000015515	ENSLOCG00000017984	si:ch211-150o23.2 (ENSLOCG00000015513)	FLNA (ENSLOCG00000015505)	ENSLOCG00000015504	rpl10 (ENSLOCG00000015500)
Reedfish	MODERN SPECIES	2	ENSECRG00000009589	ENSECRG00000009607	ENSECRG00000009641	ZBTB45 (ENSECRG00000009676)	ENSECRG00000009686	chmp2a (ENSECRG00000009694)	UBE2M (ENSECRG00000009706)	ENSECRG00000009722	ENSECRG00000009734	ENSECRG00000009741	tnnc1b (ENSECRG00000009751)	si:dkey-6n6.1 (ENSECRG00000009758)	bgna (ENSECRG00000009777)	ENSECRG00000009799	ccnq (ENSECRG00000009809)	DUSP9 (ENSECRG00000009818) #22	ENSECRG00000009832	ENSECRG00000009844	trpm4a (ENSECRG00000009857)	ENSECRG00000009885	ENSECRG00000009906	wdr13 (ENSECRG00000009926)	ENSECRG00000009953	pnkp (ENSECRG00000009996)	ENSECRG00000010035	rras (ENSECRG00000010043)	ENSECRG00000010057	ENSECRG00000010069	IRF3 (ENSECRG00000010094)	ENSECRG00000010145	ENSECRG00000010245