Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Primates	ANCESTRAL SPECIES	23	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Strepsirrhini	ANCESTRAL SPECIES	45	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Lemuriformes	ANCESTRAL SPECIES	60	ENSGT00940000161201	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935.q.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Lemuriformes_a	ANCESTRAL SPECIES	110								ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Greater bamboo lemur	MODERN SPECIES	277							LARP7 (ENSPSMG00000003620) #13	ANK2 (ENSPSMG00000005110) #14	CAMK2D (ENSPSMG00000007663) #15	ARSJ (ENSPSMG00000008750) #16	ATP2B3 (ENSPSMG00000009254) #17	BGN (ENSPSMG00000009998) #18	HAUS7 (ENSPSMG00000010024) #19	TREX2 (ENSPSMG00000010030) #20	ZFP92 (ENSPSMG00000010034) #21	DUSP9 (ENSPSMG00000010039) #22	PNCK (ENSPSMG00000010066) #23	ENSPSMG00000010151 #24	ENSPSMG00000010220 #25
Coquerels sifaka	MODERN SPECIES	882								ENSPCOG00000020542	ENSPCOG00000025588	ENSPCOG00000018479	TREX2 (ENSPCOG00000022646) #20	HAUS7 (ENSPCOG00000016936) #19	BGN (ENSPCOG00000018303) #18	ATP2B3 (ENSPCOG00000022001) #17	CCNQ (ENSPCOG00000020959)	DUSP9 (ENSPCOG00000021779) #22	PNCK (ENSPCOG00000019463) #23	ENSPCOG00000024763 #24	BCAP31 (ENSPCOG00000017960)	ABCD1 (ENSPCOG00000016908)	PLXNB3 (ENSPCOG00000024468)	SRPK3 (ENSPCOG00000018569)	IDH3G (ENSPCOG00000023374)	SSR4 (ENSPCOG00000028866)	PDZD4 (ENSPCOG00000025180)	L1CAM (ENSPCOG00000010437)	AVPR2 (ENSPCOG00000008409)	ARHGAP4 (ENSPCOG00000009927)	ENSPCOG00000027024	RENBP (ENSPCOG00000013414)	HCFC1 (ENSPCOG00000028065)
Mouse lemur	MODERN SPECIES	169	GABRA3 (ENSMICG00000042718)	ENSMICG00000012692	ENSMICG00000013442	GABRQ (ENSMICG00000047310)	ENSMICG00000005862	NSDHL (ENSMICG00000005868)	ZNF185 (ENSMICG00000005873)	ENSMICG00000046490	ENSMICG00000046759	ZFP92 (ENSMICG00000011893) #21	TREX2 (ENSMICG00000038278) #20	HAUS7 (ENSMICG00000000008) #19	BGN (ENSMICG00000000009) #18	ATP2B3 (ENSMICG00000000010) #17	CCNQ (ENSMICG00000032354)	DUSP9 (ENSMICG00000044469) #22	PNCK (ENSMICG00000013947) #23	ENSMICG00000003428 #24	BCAP31 (ENSMICG00000003437)	ABCD1 (ENSMICG00000003441)	PLXNB3 (ENSMICG00000003449)	SRPK3 (ENSMICG00000003464)	IDH3G (ENSMICG00000003472)	SSR4 (ENSMICG00000003476)	PDZD4 (ENSMICG00000027183)	L1CAM (ENSMICG00000003486)	AVPR2 (ENSMICG00000037091)	ARHGAP4 (ENSMICG00000016246)	NAA10 (ENSMICG00000010278)	RENBP (ENSMICG00000033869)	HCFC1 (ENSMICG00000016286)
Bushbaby	MODERN SPECIES	364					ENSOGAG00000029555	ENSOGAG00000030548	ENSOGAG00000032682	ENSOGAG00000031649	ZFP92 (ENSOGAG00000029963) #21	TREX2 (ENSOGAG00000033175) #20	HAUS7 (ENSOGAG00000008917) #19	ENSOGAG00000029324	BGN (ENSOGAG00000008920) #18	ATP2B3 (ENSOGAG00000008921) #17	ENSOGAG00000033279	DUSP9 (ENSOGAG00000002412) #22	PNCK (ENSOGAG00000006718) #23	ENSOGAG00000031270 #24	BCAP31 (ENSOGAG00000006721)	ABCD1 (ENSOGAG00000027153)	PLXNB3 (ENSOGAG00000003133)	SRPK3 (ENSOGAG00000003138)	ENSOGAG00000006735	SSR4 (ENSOGAG00000006738)	PDZD4 (ENSOGAG00000006741)	L1CAM (ENSOGAG00000015077)	AVPR2 (ENSOGAG00000030887)	ARHGAP4 (ENSOGAG00000015087)	NAA10 (ENSOGAG00000013263)	RENBP (ENSOGAG00000032778)	HCFC1 (ENSOGAG00000015100)
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Simiiformes	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Catarrhini	ANCESTRAL SPECIES	12	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000164672	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00940000162921	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Gorilla	MODERN SPECIES	523	ZNF185 (ENSGGOG00000017066)	PNMA5 (ENSGGOG00000000643)	PNMA3 (ENSGGOG00000034909)	ENSGGOG00000043525	ENSGGOG00000036462	MAGEA1 (ENSGGOG00000010904)	PNMA6F (ENSGGOG00000039046)	ENSGGOG00000010898	ENSGGOG00000038628	ZFP92 (ENSGGOG00000039989) #21	TREX2 (ENSGGOG00000036312) #20	HAUS7 (ENSGGOG00000007959) #19	BGN (ENSGGOG00000007211) #18	ATP2B3 (ENSGGOG00000007217) #17	ENSGGOG00000027073	DUSP9 (ENSGGOG00000015273) #22	ENSGGOG00000039596	PNCK (ENSGGOG00000005546) #23	ENSGGOG00000041742 ##24	ENSGGOG00000005559	ABCD1 (ENSGGOG00000005561)	PLXNB3 (ENSGGOG00000027723)	SRPK3 (ENSGGOG00000036424)	IDH3G (ENSGGOG00000023796)	SSR4 (ENSGGOG00000024329)	PDZD4 (ENSGGOG00000007937)	AVPR2 (ENSGGOG00000027387)	ARHGAP4 (ENSGGOG00000009770)	NAA10 (ENSGGOG00000009788)	RENBP (ENSGGOG00000009791)	HCFC1 (ENSGGOG00000009800)
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Human	MODERN SPECIES	1827	ZNF185 (ENSG00000147394)	PNMA5 (ENSG00000198883)	PNMA3 (ENSG00000183837)	PNMA6A (ENSG00000235961)	MAGEA1 (ENSG00000198681)	PWWP4 (ENSG00000278803)	PNMA6F (ENSG00000225110)	ZNF275 (ENSG00000063587)	PNMA6E (ENSG00000214897)	ZFP92 (ENSG00000189420) #21	TREX2 (ENSG00000183479) #20	HAUS7 (ENSG00000213397) #19	BGN (ENSG00000182492) #18	ATP2B3 (ENSG00000067842) #17	CCNQ (ENSG00000262919)	DUSP9 (ENSG00000130829) #22	PNCK (ENSG00000130822) #23	SLC6A8 (ENSG00000130821) #24	BCAP31 (ENSG00000185825)	ABCD1 (ENSG00000101986)	PLXNB3 (ENSG00000198753)	SRPK3 (ENSG00000184343)	IDH3G (ENSG00000067829)	SSR4 (ENSG00000180879)	PDZD4 (ENSG00000067840)	L1CAM (ENSG00000198910)	AVPR2 (ENSG00000126895)	ARHGAP4 (ENSG00000089820)	NAA10 (ENSG00000102030)	RENBP (ENSG00000102032)	HCFC1 (ENSG00000172534)
Pan	ANCESTRAL SPECIES	6	ENSGT00940000164672	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT00940000162887 #21	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e.a.b	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00390000009405.b.c.a.b	ENSGT00940000157506	ENSGT00940000167437.b	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	259																ENSPTRG00000045215 #22	ENSPTRG00000048716	ENSPTRG00000047427 #23
Chimpanzee	MODERN SPECIES	972	ENSPTRG00000044072	NSDHL (ENSPTRG00000022390)	ZNF185 (ENSPTRG00000022391)	PNMA5 (ENSPTRG00000028170)	PNMA3 (ENSPTRG00000029325)	ENSPTRG00000048952	ENSPTRG00000044850	MAGEA1 (ENSPTRG00000022386)	PNMA6F (ENSPTRG00000049868)	ZNF275 (ENSPTRG00000022394)	ZFP92 (ENSPTRG00000047228) #21	HAUS7 (ENSPTRG00000022397) #19	BGN (ENSPTRG00000022541) #18	ATP2B3 (ENSPTRG00000022399) #17	CCNQ (ENSPTRG00000043565)	ENSPTRG00000050474 #22	ENSPTRG00000043668	PNCK (ENSPTRG00000022404) #23	ENSPTRG00000050829 #24	BCAP31 (ENSPTRG00000046838)	ABCD1 (ENSPTRG00000051738)	PLXNB3 (ENSPTRG00000052414)	SRPK3 (ENSPTRG00000022410)	IDH3G (ENSPTRG00000024398)	SSR4 (ENSPTRG00000022412)	PDZD4 (ENSPTRG00000022413)	ENSPTRG00000045057	L1CAM (ENSPTRG00000022416)	ENSPTRG00000039921	AVPR2 (ENSPTRG00000033849)	ARHGAP4 (ENSPTRG00000033931)
Bonobo	MODERN SPECIES	369	MAGEA10 (ENSPPAG00000004915)	GABRA3 (ENSPPAG00000031555)	GABRQ (ENSPPAG00000032226)	CETN2 (ENSPPAG00000038780)	NSDHL (ENSPPAG00000039481)	ZNF185 (ENSPPAG00000039048)	PNMA5 (ENSPPAG00000009176)	PNMA3 (ENSPPAG00000033493)	ENSPPAG00000043033	ENSPPAG00000016764	ZFP92 (ENSPPAG00000027875) #21	HAUS7 (ENSPPAG00000034336) #19	BGN (ENSPPAG00000033259) #18	ATP2B3 (ENSPPAG00000028306) #17	ENSPPAG00000027886	DUSP9 (ENSPPAG00000043656) #22	ENSPPAG00000029417	PNCK (ENSPPAG00000030824) #23	SLC6A8 (ENSPPAG00000035106) #24	BCAP31 (ENSPPAG00000033741)	ABCD1 (ENSPPAG00000038979)	PLXNB3 (ENSPPAG00000029812)	SRPK3 (ENSPPAG00000030197)	IDH3G (ENSPPAG00000041999)	SSR4 (ENSPPAG00000041018)	PDZD4 (ENSPPAG00000038351)	ENSPPAG00000001011	L1CAM (ENSPPAG00000042079)	AVPR2 (ENSPPAG00000034862)	ARHGAP4 (ENSPPAG00000039545)	ENSPPAG00000037021
Orangutan	MODERN SPECIES	242	CETN2 (ENSPPYG00000020833)	NSDHL (ENSPPYG00000020834)	ZNF185 (ENSPPYG00000029371)	PNMA5 (ENSPPYG00000032957)	PNMA3 (ENSPPYG00000020835)	PNMA6A (ENSPPYG00000020836)	MAGEA1 (ENSPPYG00000020837)	PNMA6F (ENSPPYG00000020840)	ZNF275 (ENSPPYG00000020839)	ENSPPYG00000033472	ENSPPYG00000020841 #21	HAUS7 (ENSPPYG00000020843) #19	BGN (ENSPPYG00000020844) #18	ATP2B3 (ENSPPYG00000020845) #17	CCNQ (ENSPPYG00000020846)	DUSP9 (ENSPPYG00000020847) #22	ENSPPYG00000031169	ENSPPYG00000020848 #23	SLC6A8 (ENSPPYG00000037616) #24	BCAP31 (ENSPPYG00000020850)	ABCD1 (ENSPPYG00000020852)	SRPK3 (ENSPPYG00000020854)	IDH3G (ENSPPYG00000020855)	SSR4 (ENSPPYG00000020856)	PDZD4 (ENSPPYG00000020857)	ENSPPYG00000031511	L1CAM (ENSPPYG00000020858)	ENSPPYG00000020859	ARHGAP4 (ENSPPYG00000020860)	NAA10 (ENSPPYG00000020861)	RENBP (ENSPPYG00000020862)
Gibbon	MODERN SPECIES	449	ENSNLEG00000030965	ENSNLEG00000033117	CETN2 (ENSNLEG00000033913)	NSDHL (ENSNLEG00000013866)	ZNF185 (ENSNLEG00000013907)	PNMA3 (ENSNLEG00000018300)	ENSNLEG00000014065	ENSNLEG00000031614	ENSNLEG00000027745	ZFP92 (ENSNLEG00000013228) #21	ENSNLEG00000013237 #20	ENSNLEG00000031253 #19	BGN (ENSNLEG00000013250) #18	ATP2B3 (ENSNLEG00000032741) #17	CCNQ (ENSNLEG00000013298)	DUSP9 (ENSNLEG00000013321) #22	ENSNLEG00000027939	PNCK (ENSNLEG00000013336) #23	BCAP31 (ENSNLEG00000013380)	ABCD1 (ENSNLEG00000013458)	PLXNB3 (ENSNLEG00000013475)	ENSNLEG00000013518	IDH3G (ENSNLEG00000013540)	SSR4 (ENSNLEG00000013602)	PDZD4 (ENSNLEG00000013626)	ENSNLEG00000034251	L1CAM (ENSNLEG00000013647)	ENSNLEG00000031864	AVPR2 (ENSNLEG00000013671)	ARHGAP4 (ENSNLEG00000013678)	NAA10 (ENSNLEG00000013724)
Cercopithecidae	ANCESTRAL SPECIES	19	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Rhinopithecus	ANCESTRAL SPECIES	195								ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Golden snub-nosed monkey	MODERN SPECIES	977									ENSRROG00000033043	ENSRROG00000028871	ZFP92 (ENSRROG00000031212) #21	HAUS7 (ENSRROG00000005507) #19	BGN (ENSRROG00000042294) #18	ATP2B3 (ENSRROG00000043666) #17	CCNQ (ENSRROG00000038429)	DUSP9 (ENSRROG00000037162) #22	ENSRROG00000039351	PNCK (ENSRROG00000044383) #23	SLC6A8 (ENSRROG00000045113) #24	BCAP31 (ENSRROG00000045725)	ABCD1 (ENSRROG00000037289)	PLXNB3 (ENSRROG00000039660)	SRPK3 (ENSRROG00000011319)	IDH3G (ENSRROG00000044366)	SSR4 (ENSRROG00000035638)	PDZD4 (ENSRROG00000042678)	L1CAM (ENSRROG00000041494)	AVPR2 (ENSRROG00000036522)	ARHGAP4 (ENSRROG00000045508)	NAA10 (ENSRROG00000041881)	RENBP (ENSRROG00000034139)
Black snub-nosed monkey	MODERN SPECIES	661								PNMA6F (ENSRBIG00000030196)	ENSRBIG00000041318	PNMA6E (ENSRBIG00000025010)	ZFP92 (ENSRBIG00000027712) #21	HAUS7 (ENSRBIG00000038209) #19	BGN (ENSRBIG00000043894) #18	ATP2B3 (ENSRBIG00000030237) #17	CCNQ (ENSRBIG00000034283)	DUSP9 (ENSRBIG00000031725) #22	ENSRBIG00000028856	PNCK (ENSRBIG00000039714) #23	SLC6A8 (ENSRBIG00000040899) #24	BCAP31 (ENSRBIG00000043421)	ABCD1 (ENSRBIG00000044662)	PLXNB3 (ENSRBIG00000026773)	IDH3G (ENSRBIG00000035445)	SSR4 (ENSRBIG00000015579)	PDZD4 (ENSRBIG00000029436)	L1CAM (ENSRBIG00000036638)	ENSRBIG00000032383	ENSRBIG00000034619	ARHGAP4 (ENSRBIG00000031629)	NAA10 (ENSRBIG00000040703)	RENBP (ENSRBIG00000020101)
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000164248	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000165830	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Pig-tailed macaque	MODERN SPECIES	390								PNMA6F (ENSMNEG00000031969)	ENSMNEG00000039113	PNMA6E (ENSMNEG00000038171)	ZFP92 (ENSMNEG00000042434) #21	HAUS7 (ENSMNEG00000036428) #19	BGN (ENSMNEG00000042759) #18	ATP2B3 (ENSMNEG00000044784) #17	CCNQ (ENSMNEG00000042079)	DUSP9 (ENSMNEG00000040094) #22	ENSMNEG00000028994	PNCK (ENSMNEG00000040586) #23	SLC6A8 (ENSMNEG00000005457) #24	BCAP31 (ENSMNEG00000028474)	ABCD1 (ENSMNEG00000033571)	PLXNB3 (ENSMNEG00000032414)	SRPK3 (ENSMNEG00000030566)	IDH3G (ENSMNEG00000042620)	SSR4 (ENSMNEG00000042721)	PDZD4 (ENSMNEG00000041450)	L1CAM (ENSMNEG00000042796)	AVPR2 (ENSMNEG00000029040)	ARHGAP4 (ENSMNEG00000039860)	NAA10 (ENSMNEG00000034261)	RENBP (ENSMNEG00000038526)
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00940000164672.a.b	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272
Rhesus	MODERN SPECIES	327	CETN2 (ENSMMUG00000020743)	NSDHL (ENSMMUG00000013176)	ZNF185 (ENSMMUG00000015264)	PNMA5 (ENSMMUG00000018469)	PNMA3 (ENSMMUG00000010897)	ENSMMUG00000063804	ENSMMUG00000053273	PNMA6F (ENSMMUG00000048764)	ENSMMUG00000013386	PNMA6E (ENSMMUG00000045255)	ZFP92 (ENSMMUG00000057937) #21	HAUS7 (ENSMMUG00000012739) #19	BGN (ENSMMUG00000012743) #18	ATP2B3 (ENSMMUG00000011478) #17	CCNQ (ENSMMUG00000011480)	DUSP9 (ENSMMUG00000056988) #22	PNCK (ENSMMUG00000010585) #23	SLC6A8 (ENSMMUG00000012742) #24	BCAP31 (ENSMMUG00000012744)	ABCD1 (ENSMMUG00000012746)	SRPK3 (ENSMMUG00000003372)	IDH3G (ENSMMUG00000003374)	SSR4 (ENSMMUG00000003375)	PDZD4 (ENSMMUG00000003377)	L1CAM (ENSMMUG00000003379)	AVPR2 (ENSMMUG00000064945)	ARHGAP4 (ENSMMUG00000000323)	NAA10 (ENSMMUG00000000322)	RENBP (ENSMMUG00000000320)	HCFC1 (ENSMMUG00000000319)	TMEM187 (ENSMMUG00000005132)
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Olive baboon	MODERN SPECIES	792	IRAK1 (ENSPANG00000015781)	TMEM187 (ENSPANG00000050796)	HCFC1 (ENSPANG00000024276)	RENBP (ENSPANG00000008961)	NAA10 (ENSPANG00000014390)	ARHGAP4 (ENSPANG00000010087)	AVPR2 (ENSPANG00000004382)	L1CAM (ENSPANG00000013145)	PDZD4 (ENSPANG00000000291)	SSR4 (ENSPANG00000006591)	IDH3G (ENSPANG00000023323)	SRPK3 (ENSPANG00000004220)	PLXNB3 (ENSPANG00000008014)	ABCD1 (ENSPANG00000025399)	CCNQ (ENSPANG00000026424)	DUSP9 (ENSPANG00000004029) #22	PNCK (ENSPANG00000013747) #23	SLC6A8 (ENSPANG00000010089) #24	BCAP31 (ENSPANG00000001625)	ATP2B3 (ENSPANG00000014878) #17	BGN (ENSPANG00000022851) #18	HAUS7 (ENSPANG00000014066) #19	TREX2 (ENSPANG00000039672) #20	ZFP92 (ENSPANG00000006612) #21	ENSPANG00000035942	ENSPANG00000015246	PNMA6F (ENSPANG00000035246)	ENSPANG00000040158	PNMA3 (ENSPANG00000008016)	PNMA5 (ENSPANG00000041264)	ZNF185 (ENSPANG00000011355)
Cercopithecinae_d	ANCESTRAL SPECIES	141								ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.e	ENSGT00940000161880 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740
Sooty mangabey	MODERN SPECIES	286														ENSCATG00000032628	CCNQ (ENSCATG00000013187)	DUSP9 (ENSCATG00000009164) #22	ENSCATG00000003729	PNCK (ENSCATG00000041955) #23	SLC6A8 (ENSCATG00000001771) #24	BCAP31 (ENSCATG00000043253)	ABCD1 (ENSCATG00000042536)	PLXNB3 (ENSCATG00000037895)	SRPK3 (ENSCATG00000045096)	IDH3G (ENSCATG00000042112)	SSR4 (ENSCATG00000006344)	PDZD4 (ENSCATG00000043997)	L1CAM (ENSCATG00000041515)	AVPR2 (ENSCATG00000036647)	ARHGAP4 (ENSCATG00000042499)	NAA10 (ENSCATG00000038709)	RENBP (ENSCATG00000037009)
Drill	MODERN SPECIES	1411								PNMA6F (ENSMLEG00000035105)	ENSMLEG00000040255	PNMA6E (ENSMLEG00000041204)	ZFP92 (ENSMLEG00000013319) #21	HAUS7 (ENSMLEG00000038483) #19	BGN (ENSMLEG00000029067) #18	ATP2B3 (ENSMLEG00000032665) #17	CCNQ (ENSMLEG00000039950)	DUSP9 (ENSMLEG00000042559) #22	ENSMLEG00000027362	PNCK (ENSMLEG00000027716) #23	SLC6A8 (ENSMLEG00000042530) #24	BCAP31 (ENSMLEG00000042884)	ABCD1 (ENSMLEG00000041428)	PLXNB3 (ENSMLEG00000032454)	IDH3G (ENSMLEG00000038908)	SSR4 (ENSMLEG00000016802)	PDZD4 (ENSMLEG00000004595)	L1CAM (ENSMLEG00000036326)	AVPR2 (ENSMLEG00000042889)	ARHGAP4 (ENSMLEG00000038659)	NAA10 (ENSMLEG00000032424)	RENBP (ENSMLEG00000038487)	HCFC1 (ENSMLEG00000042451)
Vervet Monkey	MODERN SPECIES	203	ENSCSAG00000006992	CETN2 (ENSCSAG00000006984)	NSDHL (ENSCSAG00000006982)	ZNF185 (ENSCSAG00000006979)	PNMA5 (ENSCSAG00000000526)	PNMA3 (ENSCSAG00000000525)	MAGEA1 (ENSCSAG00000000524)	ENSCSAG00000006975	ENSCSAG00000006968	ZFP92 (ENSCSAG00000006967) #21	HAUS7 (ENSCSAG00000006961) #19	ENSCSAG00000006955	BGN (ENSCSAG00000006954) #18	ATP2B3 (ENSCSAG00000006948) #17	CCNQ (ENSCSAG00000006940)	DUSP9 (ENSCSAG00000006926) #22	PNCK (ENSCSAG00000006923) #23	SLC6A8 (ENSCSAG00000006918) #24	BCAP31 (ENSCSAG00000006911)	PLXNB3 (ENSCSAG00000006893)	SRPK3 (ENSCSAG00000006884)	IDH3G (ENSCSAG00000006879)	SSR4 (ENSCSAG00000006874)	PDZD4 (ENSCSAG00000006871)	L1CAM (ENSCSAG00000006864)	AVPR2 (ENSCSAG00000006857)	ARHGAP4 (ENSCSAG00000006854)	NAA10 (ENSCSAG00000006823)	RENBP (ENSCSAG00000006814)	HCFC1 (ENSCSAG00000006809)	TMEM187 (ENSCSAG00000000523)
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.c	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a.f	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Cebidae	ANCESTRAL SPECIES	27	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.c	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a.f	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Marmoset	MODERN SPECIES	78	ENSCJAG00000016338	NSDHL (ENSCJAG00000016347)	ZNF185 (ENSCJAG00000016363)	PNMA5 (ENSCJAG00000016373)	PNMA3 (ENSCJAG00000022542)	PWWP4 (ENSCJAG00000052872)	PNMA6F (ENSCJAG00000042286)	ENSCJAG00000019468	PNMA6E (ENSCJAG00000048415)	ZFP92 (ENSCJAG00000011538) #21	TREX2 (ENSCJAG00000011515) #20	HAUS7 (ENSCJAG00000036194) #19	BGN (ENSCJAG00000011493) #18	ATP2B3 (ENSCJAG00000011413) #17	ENSCJAG00000011407	DUSP9 (ENSCJAG00000047408) #22	ENSCJAG00000081213 #23	ENSCJAG00000011356 #24	BCAP31 (ENSCJAG00000011348)	ABCD1 (ENSCJAG00000011337)	PLXNB3 (ENSCJAG00000011267)	SRPK3 (ENSCJAG00000011233)	PDZD4 (ENSCJAG00000011185)	SSR4 (ENSCJAG00000011167)	ENSCJAG00000074256	ENSCJAG00000022809	L1CAM (ENSCJAG00000011023)	ARHGAP4 (ENSCJAG00000011008)	AVPR2 (ENSCJAG00000011022)	NAA10 (ENSCJAG00000014506)	RENBP (ENSCJAG00000014500)
Cebidae_a	ANCESTRAL SPECIES	78							ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d	ENSGT00940000162887 #21	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445.c	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a.f	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Capuchin	MODERN SPECIES	597								ENSCCAG00000024093	ENSCCAG00000020739	ENSCCAG00000030112	ZFP92 (ENSCCAG00000034129) #21	HAUS7 (ENSCCAG00000030265) #19	BGN (ENSCCAG00000018493) #18	ATP2B3 (ENSCCAG00000027100) #17	CCNQ (ENSCCAG00000029897)	DUSP9 (ENSCCAG00000033198) #22	ENSCCAG00000023569	PNCK (ENSCCAG00000021403) #23	SLC6A8 (ENSCCAG00000035546) #24	BCAP31 (ENSCCAG00000033187)	ABCD1 (ENSCCAG00000019717)	PLXNB3 (ENSCCAG00000024352)	SRPK3 (ENSCCAG00000021599)	SSR4 (ENSCCAG00000020454)	PDZD4 (ENSCCAG00000022158)	L1CAM (ENSCCAG00000032233)	AVPR2 (ENSCCAG00000028592)	ARHGAP4 (ENSCCAG00000025262)	ENSCCAG00000033959	RENBP (ENSCCAG00000037940)	HCFC1 (ENSCCAG00000021425)
Bolivian squirrel monkey	MODERN SPECIES	236								PNMA6F (ENSSBOG00000015383)	ENSSBOG00000027546	ENSSBOG00000030661	ZFP92 (ENSSBOG00000028775) #21	HAUS7 (ENSSBOG00000028472) #19	BGN (ENSSBOG00000029980) #18	ATP2B3 (ENSSBOG00000032052) #17	ENSSBOG00000029871	DUSP9 (ENSSBOG00000001225) #22	PNCK (ENSSBOG00000031039) #23	ENSSBOG00000033535 #24	ENSSBOG00000028295	ABCD1 (ENSSBOG00000024968)	PLXNB3 (ENSSBOG00000025081)	SRPK3 (ENSSBOG00000024085)	IDH3G (ENSSBOG00000019899)	SSR4 (ENSSBOG00000022316)	PDZD4 (ENSSBOG00000033217)	L1CAM (ENSSBOG00000033301)	AVPR2 (ENSSBOG00000031595)	ARHGAP4 (ENSSBOG00000023946)	ENSSBOG00000020071	RENBP (ENSSBOG00000034728)	HCFC1 (ENSSBOG00000034222)
Mas night monkey	MODERN SPECIES	1312								PNMA6F (ENSANAG00000025537)	ZNF275 (ENSANAG00000025581)	ENSANAG00000022983	ZFP92 (ENSANAG00000038344) #21	HAUS7 (ENSANAG00000022685) #19	BGN (ENSANAG00000033529) #18	ATP2B3 (ENSANAG00000032972) #17	ENSANAG00000000457	DUSP9 (ENSANAG00000019919) #22	PNCK (ENSANAG00000010774) #23	ENSANAG00000037607 #24	BCAP31 (ENSANAG00000035222)	ABCD1 (ENSANAG00000035583)	PLXNB3 (ENSANAG00000036384)	SRPK3 (ENSANAG00000037077)	ENSANAG00000024077	SSR4 (ENSANAG00000035059)	PDZD4 (ENSANAG00000026191)	L1CAM (ENSANAG00000035752)	AVPR2 (ENSANAG00000022496)	ARHGAP4 (ENSANAG00000023680)	NAA10 (ENSANAG00000019745)	RENBP (ENSANAG00000034421)	HCFC1 (ENSANAG00000030898)
Tarsier	MODERN SPECIES	2197									ENSTSYG00000000195	ENSTSYG00000036390	ENSTSYG00000031978 #21	HAUS7 (ENSTSYG00000030026) #19	BGN (ENSTSYG00000030156) #18	ATP2B3 (ENSTSYG00000034877) #17	FAM58A (ENSTSYG00000026900)	DUSP9 (ENSTSYG00000026755) #22	PNCK (ENSTSYG00000034891) #23	ENSTSYG00000033997 #24	BCAP31 (ENSTSYG00000003985)	ABCD1 (ENSTSYG00000028624)	PLXNB3 (ENSTSYG00000032080)
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Glires	ANCESTRAL SPECIES	10	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Lagomorpha	ANCESTRAL SPECIES	103											ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272
Rabbit	MODERN SPECIES	549											TREX2 (ENSOCUG00000025054) #20	ENSOCUG00000002376 #19	BGN (ENSOCUG00000023931) #18	ATP2B3 (ENSOCUG00000029623) #17	CCNQ (ENSOCUG00000002393)	DUSP9 (ENSOCUG00000021158) #22	PNCK (ENSOCUG00000002399) #23	BCAP31 (ENSOCUG00000017921)	PLXNB3 (ENSOCUG00000016506)	ABCD1 (ENSOCUG00000017922)	IDH3G (ENSOCUG00000016554)	SSR4 (ENSOCUG00000027360)	ENSOCUG00000026260 #24	PDZD4 (ENSOCUG00000017200)	L1CAM (ENSOCUG00000001102)	AVPR2 (ENSOCUG00000015695)	ARHGAP4 (ENSOCUG00000001107)	NAA10 (ENSOCUG00000001111)	RENBP (ENSOCUG00000025840)	HCFC1 (ENSOCUG00000001113)	TMEM187 (ENSOCUG00000001116)
Pika	MODERN SPECIES	8486																DUSP9 (ENSOPRG00000012013) #22
Rodentia	ANCESTRAL SPECIES	10	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Muroidea	ANCESTRAL SPECIES	13	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00390000006832	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Cricetinae	ANCESTRAL SPECIES	46						ENSGT00390000000062.x.b.k.b	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00940000161383	ENSGT00940000160502
Golden Hamster	MODERN SPECIES	857									ENSMAUG00000019268	Gm18336 (ENSMAUG00000017654)	Zfp92 (ENSMAUG00000006204) #21	Trex2 (ENSMAUG00000006617) #20	Haus7 (ENSMAUG00000020073) #19	Bgn (ENSMAUG00000020050) #18	Atp2b3 (ENSMAUG00000009992) #17	Dusp9 (ENSMAUG00000020993) #22	Pnck (ENSMAUG00000017486) #23	Slc6a8 (ENSMAUG00000017007) #24	Bcap31 (ENSMAUG00000009135)	Abcd1 (ENSMAUG00000020103)	Plxnb3 (ENSMAUG00000005458)	Srpk3 (ENSMAUG00000009935)	Idh3g (ENSMAUG00000000657)	ENSMAUG00000015090	Pdzd4 (ENSMAUG00000000466)	L1cam (ENSMAUG00000008575)	Avpr2 (ENSMAUG00000001098)	Arhgap4 (ENSMAUG00000020011)	Naa10 (ENSMAUG00000019021)	Hcfc1 (ENSMAUG00000018495)	Irak1 (ENSMAUG00000002430)
Chinese hamster chok1gshd	MODERN SPECIES	16	Nsdhl (ENSCGRG00001015462)	Zfp185 (ENSCGRG00001021834)	ENSCGRG00001024731	ENSCGRG00001005230	ENSCGRG00001023020	F8a (ENSCGRG00001010823)	ENSCGRG00001011071	Gm45015 (ENSCGRG00001000704)	ENSCGRG00001020684	Gm18336 (ENSCGRG00001009753)	Zfp92 (ENSCGRG00001024615) #21	Trex2 (ENSCGRG00001012110) #20	Haus7 (ENSCGRG00001014259) #19	Bgn (ENSCGRG00001004273) #18	Atp2b3 (ENSCGRG00001013946) #17	Dusp9 (ENSCGRG00001015656) #22	Pnck (ENSCGRG00001015654) #23	Slc6a8 (ENSCGRG00001013941) #24	ENSCGRG00001022627	Abcd1 (ENSCGRG00001017773)	Plxnb3 (ENSCGRG00001024658)	Srpk3 (ENSCGRG00001005920)	Idh3g (ENSCGRG00001012756)	Ssr4 (ENSCGRG00001019369)	Pdzd4 (ENSCGRG00001012732)	L1cam (ENSCGRG00001020541)	Avpr2 (ENSCGRG00001010799)	Arhgap4 (ENSCGRG00001023232)	Naa10 (ENSCGRG00001012595)	Hcfc1 (ENSCGRG00001019535)	Irak1 (ENSCGRG00001013928)
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00940000161201	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v.i #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Prairie vole	MODERN SPECIES	212									ENSMOCG00000008885	Gm18336 (ENSMOCG00000000683)	Zfp92 (ENSMOCG00000015417) #21	Trex2 (ENSMOCG00000001305) #20	ENSMOCG00000016829 #19	Bgn (ENSMOCG00000005439) #18	Atp2b3 (ENSMOCG00000016837) #17	Dusp9 (ENSMOCG00000014149) #22	Pnck (ENSMOCG00000005305) #23	Slc6a8 (ENSMOCG00000013922) #24	Bcap31 (ENSMOCG00000011355)	Abcd1 (ENSMOCG00000020381)	Plxnb3 (ENSMOCG00000016754)	Srpk3 (ENSMOCG00000000270)	Idh3g (ENSMOCG00000013265)	Ssr4 (ENSMOCG00000000481)	Pdzd4 (ENSMOCG00000013342)	L1cam (ENSMOCG00000018901)	Avpr2 (ENSMOCG00000012257)	Arhgap4 (ENSMOCG00000010795)	Naa10 (ENSMOCG00000011968)	Renbp (ENSMOCG00000021137)	Hcfc1 (ENSMOCG00000018390)
Northern American deer mouse	MODERN SPECIES	475	Gabrq (ENSPEMG00000024127)	Cetn2 (ENSPEMG00000009693)	Nsdhl (ENSPEMG00000028251)	ENSPEMG00000016866	Zfp185 (ENSPEMG00000001172)	Pnma5 (ENSPEMG00000029060)	ENSPEMG00000029415	ENSPEMG00000014112	Zfp275 (ENSPEMG00000028598)	ENSPEMG00000002119	Zfp92 (ENSPEMG00000029357) #21	Trex2 (ENSPEMG00000004918) #20	Haus7 (ENSPEMG00000011467) #19	Bgn (ENSPEMG00000017164) #18	Atp2b3 (ENSPEMG00000001607) #17	Dusp9 (ENSPEMG00000009249) #22	Pnck (ENSPEMG00000018929) #23	ENSPEMG00000001387 #24	Bcap31 (ENSPEMG00000018100)	Abcd1 (ENSPEMG00000010748)	Plxnb3 (ENSPEMG00000019022)	Srpk3 (ENSPEMG00000012149)	Idh3g (ENSPEMG00000011232)	Ssr4 (ENSPEMG00000008760)	Pdzd4 (ENSPEMG00000008494)	L1cam (ENSPEMG00000011592)	Avpr2 (ENSPEMG00000008325)	Arhgap4 (ENSPEMG00000019112)	ENSPEMG00000010870	Hcfc1 (ENSPEMG00000011837)	Irak1 (ENSPEMG00000001469)
Murinae	ANCESTRAL SPECIES	14	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Mus	ANCESTRAL SPECIES	9	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Mus_B	ANCESTRAL SPECIES	14	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT00390000000062.x.b.k.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000154972.eb.a	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
spretus	MODERN SPECIES	19	Magea10 (MGP_SPRETEiJ_G0034293)	Gabra3 (MGP_SPRETEiJ_G0034294)	Gabrq (MGP_SPRETEiJ_G0034295)	Cetn2 (MGP_SPRETEiJ_G0034296)	Nsdhl (MGP_SPRETEiJ_G0034297)	Zfp185 (MGP_SPRETEiJ_G0034298)	Pnma5 (MGP_SPRETEiJ_G0034299)	Pnma3 (MGP_SPRETEiJ_G0034300)	F8a (MGP_SPRETEiJ_G0034301)	Zfp275 (MGP_SPRETEiJ_G0034302)	Zfp92 (MGP_SPRETEiJ_G0034303) #21	Trex2 (MGP_SPRETEiJ_G0034304) #20	Haus7 (MGP_SPRETEiJ_G0034305) #19	Bgn (MGP_SPRETEiJ_G0034306) #18	Atp2b3 (MGP_SPRETEiJ_G0034307) #17	Dusp9 (MGP_SPRETEiJ_G0034308) #22	Pnck (MGP_SPRETEiJ_G0034309) #23	Slc6a8 (MGP_SPRETEiJ_G0034310) #24	Bcap31 (MGP_SPRETEiJ_G0034311)	Abcd1 (MGP_SPRETEiJ_G0034312)	Plxnb3 (MGP_SPRETEiJ_G0034313)	Srpk3 (MGP_SPRETEiJ_G0034314)	Idh3g (MGP_SPRETEiJ_G0034315)	Ssr4 (MGP_SPRETEiJ_G0034316)	Pdzd4 (MGP_SPRETEiJ_G0034317)	L1cam (MGP_SPRETEiJ_G0034318)	Arhgap4 (MGP_SPRETEiJ_G0034319)	Avpr2 (MGP_SPRETEiJ_G0034320)	Naa10 (MGP_SPRETEiJ_G0034321)	Renbp (MGP_SPRETEiJ_G0034322)	Hcfc1 (MGP_SPRETEiJ_G0034323)
Steppe mouse	MODERN SPECIES	886																Dusp9 (ENSMSIG00000007104) #22
Mouse	MODERN SPECIES	37	Spin2d (ENSMUSG00000079566)	Xlr3b (ENSMUSG00000073125)	Xlr4b (ENSMUSG00000067768)	F8a (ENSMUSG00000078317)	Xlr4c (ENSMUSG00000031362)	Xlr3c (ENSMUSG00000058147)	Xlr5c (ENSMUSG00000067764)	Gm45015 (ENSMUSG00000109368)	Zfp275 (ENSMUSG00000031365)	Gm18336 (ENSMUSG00000096966)	Zfp92 (ENSMUSG00000031374) #21	Trex2 (ENSMUSG00000031372) #20	Haus7 (ENSMUSG00000031371) #19	Bgn (ENSMUSG00000031375) #18	Atp2b3 (ENSMUSG00000031376) #17	Dusp9 (ENSMUSG00000031383) #22	Pnck (ENSMUSG00000002012) #23	Slc6a8 (ENSMUSG00000019558) #24	Bcap31 (ENSMUSG00000002015)	Abcd1 (ENSMUSG00000031378)	Plxnb3 (ENSMUSG00000031385)	Srpk3 (ENSMUSG00000002007)	Idh3g (ENSMUSG00000002010)	Ssr4 (ENSMUSG00000002014)	Pdzd4 (ENSMUSG00000002006)	L1cam (ENSMUSG00000031391)	Arhgap4 (ENSMUSG00000031389)	Avpr2 (ENSMUSG00000031390)	Naa10 (ENSMUSG00000031388)	Renbp (ENSMUSG00000031387)	Hcfc1 (ENSMUSG00000031386)
Ryukyu mouse	MODERN SPECIES	19	Magea4 (MGP_CAROLIEiJ_G0033138)	Gabre (MGP_CAROLIEiJ_G0033139)	Magea10 (MGP_CAROLIEiJ_G0033140)	Gabra3 (MGP_CAROLIEiJ_G0033141)	Gabrq (MGP_CAROLIEiJ_G0033142)	Cetn2 (MGP_CAROLIEiJ_G0033143)	Nsdhl (MGP_CAROLIEiJ_G0033144)	Zfp185 (MGP_CAROLIEiJ_G0033145)	Pnma5 (MGP_CAROLIEiJ_G0033146)	Zfp275 (MGP_CAROLIEiJ_G0033147)	Zfp92 (MGP_CAROLIEiJ_G0033148) #21	Trex2 (MGP_CAROLIEiJ_G0033149) #20	Haus7 (MGP_CAROLIEiJ_G0033150) #19	Bgn (MGP_CAROLIEiJ_G0033151) #18	Atp2b3 (MGP_CAROLIEiJ_G0033152) #17	Dusp9 (MGP_CAROLIEiJ_G0033153) #22	Pnck (MGP_CAROLIEiJ_G0033154) #23	Slc6a8 (MGP_CAROLIEiJ_G0033155) #24	Bcap31 (MGP_CAROLIEiJ_G0033156)	Abcd1 (MGP_CAROLIEiJ_G0033157)	Plxnb3 (MGP_CAROLIEiJ_G0033158)	Srpk3 (MGP_CAROLIEiJ_G0033159)	Idh3g (MGP_CAROLIEiJ_G0033160)	Ssr4 (MGP_CAROLIEiJ_G0033161)	Pdzd4 (MGP_CAROLIEiJ_G0033162)	L1cam (MGP_CAROLIEiJ_G0033163)	Arhgap4 (MGP_CAROLIEiJ_G0033164)	Avpr2 (MGP_CAROLIEiJ_G0033165)	Naa10 (MGP_CAROLIEiJ_G0033166)	Renbp (MGP_CAROLIEiJ_G0033167)	Hcfc1 (MGP_CAROLIEiJ_G0033168)
Shrew mouse	MODERN SPECIES	23	Magea10 (MGP_PahariEiJ_G0031681)	Gabra3 (MGP_PahariEiJ_G0031682)	Gabrq (MGP_PahariEiJ_G0031683)	Cetn2 (MGP_PahariEiJ_G0031684)	Nsdhl (MGP_PahariEiJ_G0031685)	Zfp185 (MGP_PahariEiJ_G0031686)	MGP_PahariEiJ_G0031687	MGP_PahariEiJ_G0031688	MGP_PahariEiJ_G0031689	Zfp275 (MGP_PahariEiJ_G0031690)	MGP_PahariEiJ_G0031691 #21	Trex2 (MGP_PahariEiJ_G0031692) #20	Haus7 (MGP_PahariEiJ_G0031693) #19	Bgn (MGP_PahariEiJ_G0031694) #18	Atp2b3 (MGP_PahariEiJ_G0031695) #17	Dusp9 (MGP_PahariEiJ_G0031696) #22	Pnck (MGP_PahariEiJ_G0031697) #23	Slc6a8 (MGP_PahariEiJ_G0031698) #24	Bcap31 (MGP_PahariEiJ_G0031699)	Abcd1 (MGP_PahariEiJ_G0031700)	Plxnb3 (MGP_PahariEiJ_G0031701)	Srpk3 (MGP_PahariEiJ_G0031702)	Idh3g (MGP_PahariEiJ_G0031703)	Ssr4 (MGP_PahariEiJ_G0031704)	Pdzd4 (MGP_PahariEiJ_G0031705)	L1cam (MGP_PahariEiJ_G0031706)	Arhgap4 (MGP_PahariEiJ_G0031707)	Avpr2 (MGP_PahariEiJ_G0031708)	Naa10 (MGP_PahariEiJ_G0031709)	Renbp (MGP_PahariEiJ_G0031710)	Hcfc1 (MGP_PahariEiJ_G0031711)
Rat	MODERN SPECIES	46	F8a1 (ENSRNOG00000070033)	LOC103690322 (ENSRNOG00000055822)	LOC100911047 (ENSRNOG00000068104)	Xlr3a (ENSRNOG00000064693)	LOC100911002 (ENSRNOG00000050177)	Pwwp4 (ENSRNOG00000068777)	ENSRNOG00000069789	Zfp275 (ENSRNOG00000061073)	RGD1559982 (ENSRNOG00000070467)	Zfp92 (ENSRNOG00000051836) #21	Trex2 (ENSRNOG00000056983) #20	Haus7 (ENSRNOG00000055648) #19	Bgn (ENSRNOG00000055962) #18	Atp2b3 (ENSRNOG00000061304) #17	AABR07071935.1 (ENSRNOG00000061441)	Dusp9 (ENSRNOG00000055185) #22	Pnck (ENSRNOG00000058317) #23	Slc6a8 (ENSRNOG00000057620) #24	Bcap31 (ENSRNOG00000055756)	Abcd1 (ENSRNOG00000056524)	Plxnb3 (ENSRNOG00000061731)	Srpk3 (ENSRNOG00000054548)	Idh3g (ENSRNOG00000055572)	Ssr4 (ENSRNOG00000053172)	Pdzd4 (ENSRNOG00000056174)	L1cam (ENSRNOG00000061230)	Arhgap4 (ENSRNOG00000058545)	Avpr2 (ENSRNOG00000059862)	Naa10 (ENSRNOG00000060063)	Renbp (ENSRNOG00000054765)	Hcfc1 (ENSRNOG00000051948)
Upper Galilee mountains blind mole rat	MODERN SPECIES	660	Magea10 (ENSNGAG00000018067)	Gabra3 (ENSNGAG00000004762)	Gabrq (ENSNGAG00000023448)	Cetn2 (ENSNGAG00000013931)	Nsdhl (ENSNGAG00000013199)	Zfp185 (ENSNGAG00000007010)	Pnma3 (ENSNGAG00000021577)	Zfp275 (ENSNGAG00000023803)	Gm18336 (ENSNGAG00000010715)	Zfp92 (ENSNGAG00000014044) #21	Trex2 (ENSNGAG00000022556) #20	Haus7 (ENSNGAG00000004509) #19	Bgn (ENSNGAG00000020236) #18	Atp2b3 (ENSNGAG00000023103) #17	ENSNGAG00000022572	Dusp9 (ENSNGAG00000022463) #22	Pnck (ENSNGAG00000024203) #23	Slc6a8 (ENSNGAG00000012992) #24	Bcap31 (ENSNGAG00000005195)	Abcd1 (ENSNGAG00000023420)	Plxnb3 (ENSNGAG00000023368)	Srpk3 (ENSNGAG00000021121)	Idh3g (ENSNGAG00000017889)	ENSNGAG00000015787	Pdzd4 (ENSNGAG00000009443)	L1cam (ENSNGAG00000013550)	Avpr2 (ENSNGAG00000009849)	Arhgap4 (ENSNGAG00000015413)	Naa10 (ENSNGAG00000020303)	Renbp (ENSNGAG00000021686)	Hcfc1 (ENSNGAG00000013083)
Lesser Egyptian jerboa	MODERN SPECIES	224							Pnma5 (ENSJJAG00000022106)	ENSJJAG00000023268	Zfp275 (ENSJJAG00000023544)	ENSJJAG00000023776	Zfp92 (ENSJJAG00000024019) #21	Trex2 (ENSJJAG00000012484) #20	Haus7 (ENSJJAG00000011304) #19	Bgn (ENSJJAG00000014050) #18	Atp2b3 (ENSJJAG00000014975) #17	Dusp9 (ENSJJAG00000018570) #22	Pnck (ENSJJAG00000020546) #23	Slc6a8 (ENSJJAG00000022046) #24	Bcap31 (ENSJJAG00000011510)	Abcd1 (ENSJJAG00000012430)	Plxnb3 (ENSJJAG00000017006)	Srpk3 (ENSJJAG00000019785)	Idh3g (ENSJJAG00000015962)	Ssr4 (ENSJJAG00000017842)	Pdzd4 (ENSJJAG00000018534)	L1cam (ENSJJAG00000021077)	Avpr2 (ENSJJAG00000018314)	Arhgap4 (ENSJJAG00000021798)	Naa10 (ENSJJAG00000023398)	Renbp (ENSJJAG00000010739)	Hcfc1 (ENSJJAG00000012815)
Kangaroo rat	MODERN SPECIES	526									ENSDORG00000029018	Zfp92 (ENSDORG00000001936) #21	Trex2 (ENSDORG00000023727) #20	Haus7 (ENSDORG00000001235) #19	ENSDORG00000001237 #18	Atp2b3 (ENSDORG00000013038) #17	ENSDORG00000012846	Dusp9 (ENSDORG00000024222) #22	Pnck (ENSDORG00000014186) #23	Slc6a8 (ENSDORG00000001174) #24	Bcap31 (ENSDORG00000006022)	Abcd1 (ENSDORG00000006023)	Plxnb3 (ENSDORG00000006024)	Srpk3 (ENSDORG00000006026)	Idh3g (ENSDORG00000006029)	Ssr4 (ENSDORG00000006030)	Pdzd4 (ENSDORG00000028112)	L1cam (ENSDORG00000014093)	Avpr2 (ENSDORG00000002747)	Arhgap4 (ENSDORG00000002750)	Naa10 (ENSDORG00000002753)	Renbp (ENSDORG00000002755)	Hcfc1 (ENSDORG00000002756)
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935.eb.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935.eb.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Hystricomorpha_b	ANCESTRAL SPECIES	84	ENSGT00940000155374	ENSGT00940000161201	ENSGT00940000154972	ENSGT00940000159444	ENSGT00940000162167	ENSGT00940000155935.eb.a	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000154488.B	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Degu	MODERN SPECIES	259		ENSODEG00000002731	ENSODEG00000002721	CCSER1 (ENSODEG00000002701)	ENSODEG00000003691	GABRQ (ENSODEG00000003646)	ENSODEG00000003612	NSDHL (ENSODEG00000003563)	ENSODEG00000003535	ZFP92 (ENSODEG00000003508) #21	TREX2 (ENSODEG00000019142) #20	HAUS7 (ENSODEG00000003475) #19	BGN (ENSODEG00000003451) #18	ATP2B3 (ENSODEG00000003358) #17	CCNQ (ENSODEG00000003285)	DUSP9 (ENSODEG00000003261) #22	PNCK (ENSODEG00000003252) #23	ENSODEG00000003207 #24	BCAP31 (ENSODEG00000003174)	ABCD1 (ENSODEG00000003127)	PLXNB3 (ENSODEG00000002965)	SRPK3 (ENSODEG00000002869)	IDH3G (ENSODEG00000002774)	SSR4 (ENSODEG00000002732)	PDZD4 (ENSODEG00000005482)	L1CAM (ENSODEG00000005259)	ENSODEG00000005204	AVPR2 (ENSODEG00000005166)	ARHGAP4 (ENSODEG00000005124)	ENSODEG00000005100	RENBP (ENSODEG00000005065)
Long-tailed chinchilla	MODERN SPECIES	287									ENSCLAG00000002477	ZFP92 (ENSCLAG00000002658) #21	TREX2 (ENSCLAG00000002698) #20	HAUS7 (ENSCLAG00000002789) #19	BGN (ENSCLAG00000003040) #18	ATP2B3 (ENSCLAG00000006386) #17	CCNQ (ENSCLAG00000008202)	DUSP9 (ENSCLAG00000008316) #22	PNCK (ENSCLAG00000002167) #23	ENSCLAG00000002550 #24	BCAP31 (ENSCLAG00000002843)	ABCD1 (ENSCLAG00000001650)	PLXNB3 (ENSCLAG00000001828)	SRPK3 (ENSCLAG00000001932)	IDH3G (ENSCLAG00000002456)	SSR4 (ENSCLAG00000002670)	PDZD4 (ENSCLAG00000002707)	L1CAM (ENSCLAG00000001453)	AVPR2 (ENSCLAG00000002650)	ENSCLAG00000001334	NAA10 (ENSCLAG00000001427)	RENBP (ENSCLAG00000003810)	HCFC1 (ENSCLAG00000004175)
Guinea pig	MODERN SPECIES	148							ENSCPOG00000037160	ENSCPOG00000011291	ENSCPOG00000020829	ZFP92 (ENSCPOG00000006654) #21	TREX2 (ENSCPOG00000025702) #20	HAUS7 (ENSCPOG00000007497) #19	BGN (ENSCPOG00000023628) #18	ATP2B3 (ENSCPOG00000005102) #17	CCNQ (ENSCPOG00000009250)	DUSP9 (ENSCPOG00000000114) #22	ENSCPOG00000011710 #24	BCAP31 (ENSCPOG00000008510)	ABCD1 (ENSCPOG00000011702)	PLXNB3 (ENSCPOG00000006868)	SRPK3 (ENSCPOG00000006881)	IDH3G (ENSCPOG00000006890)	SSR4 (ENSCPOG00000006898)	PDZD4 (ENSCPOG00000019482)	L1CAM (ENSCPOG00000005519)	AVPR2 (ENSCPOG00000012697)	ENSCPOG00000026143	NAA10 (ENSCPOG00000011495)	ENSCPOG00000024784	IRAK1 (ENSCPOG00000039151)	MECP2 (ENSCPOG00000012579)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000033617	ENSHGLG00000045983	ENSHGLG00000047243	ENSHGLG00000045027	ENSHGLG00000000219	ENSHGLG00000035866	ENSHGLG00000032270	ENSHGLG00000046068	ENSHGLG00000045727	ENSHGLG00000035589 #21	TREX2 (ENSHGLG00000008010) #20	HAUS7 (ENSHGLG00000002908) #19	BGN (ENSHGLG00000004010) #18	ATP2B3 (ENSHGLG00000000642) #17	CCNQ (ENSHGLG00000003517)	DUSP9 (ENSHGLG00000004236) #22	PNCK (ENSHGLG00000006098) #23	ENSHGLG00000037294 #24	BCAP31 (ENSHGLG00000000710)	ABCD1 (ENSHGLG00000001000)	PLXNB3 (ENSHGLG00000002203)	IDH3G (ENSHGLG00000000443)	SSR4 (ENSHGLG00000001720)	PDZD4 (ENSHGLG00000001939)	L1CAM (ENSHGLG00000003403)	AVPR2 (ENSHGLG00000006784)	ARHGAP4 (ENSHGLG00000000857)	NAA10 (ENSHGLG00000002773)	RENBP (ENSHGLG00000009835)	HCFC1 (ENSHGLG00000001143)	IRAK1 (ENSHGLG00000002116)
Sciuridae	ANCESTRAL SPECIES	27	ENSGT00940000162167	ENSGT00940000155935.cb	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT01030000234522.C.b.e.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Eurasian red squirrel	MODERN SPECIES	156	NSDHL (ENSSVLG00005022122)	ZNF185 (ENSSVLG00005022073)	PNMA5 (ENSSVLG00005022038)	ENSSVLG00005021967	PNMA3 (ENSSVLG00005021940)	ENSSVLG00005021915	ENSSVLG00005021891	ENSSVLG00005021871	ENSSVLG00005021782	ENSSVLG00005021735	ZFP92 (ENSSVLG00005021718) #21	HAUS7 (ENSSVLG00005021619) #19	BGN (ENSSVLG00005021572) #18	ATP2B3 (ENSSVLG00005020846) #17	CCNQ (ENSSVLG00005020662)	DUSP9 (ENSSVLG00005020621) #22	PNCK (ENSSVLG00005020384) #23	ENSSVLG00005020284 #24	BCAP31 (ENSSVLG00005020208)	ABCD1 (ENSSVLG00005020163)	ENSSVLG00005020066	SRPK3 (ENSSVLG00005020004)	IDH3G (ENSSVLG00005019902)	SSR4 (ENSSVLG00005019816)	PDZD4 (ENSSVLG00005019686)	AVPR2 (ENSSVLG00005019578)	ENSSVLG00005019536	ARHGAP4 (ENSSVLG00005019458)	NAA10 (ENSSVLG00005019123)	RENBP (ENSSVLG00005019023)	HCFC1 (ENSSVLG00005018524)
Marmotini	ANCESTRAL SPECIES	83								ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Alpin marmot	MODERN SPECIES	541																ENSMMMG00000001424 #22
Marmotini_b	ANCESTRAL SPECIES	124								ENSGT00940000153582.b.a.a.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.b	ENSGT00940000162887 #21	ENSGT00390000012715.a #20	ENSGT00390000003937 #19	ENSGT00940000155311.C #18	ENSGT00940000160765 #17	ENSGT00940000155445	ENSGT00940000161880 #22	ENSGT00940000162187 #23	ENSGT00940000155869.v #24	ENSGT00390000011863.c	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a.g.a	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383
Arctic ground squirrel	MODERN SPECIES	562								ZNF275 (ENSUPAG00010012750)	ENSUPAG00010012742	ZFP92 (ENSUPAG00010012725) #21	TREX2 (ENSUPAG00010012721) #20	HAUS7 (ENSUPAG00010012697) #19	BGN (ENSUPAG00010012684) #18	ATP2B3 (ENSUPAG00010012590) #17	CCNQ (ENSUPAG00010012574)	DUSP9 (ENSUPAG00010012557) #22	PNCK (ENSUPAG00010012527) #23	ENSUPAG00010012523 #24	ABCD1 (ENSUPAG00010012506)	ENSUPAG00010012496	ENSUPAG00010012465	SRPK3 (ENSUPAG00010012441)	IDH3G (ENSUPAG00010012400)	SSR4 (ENSUPAG00010012375)	PDZD4 (ENSUPAG00010012358)	L1CAM (ENSUPAG00010012204)	AVPR2 (ENSUPAG00010012191)	ARHGAP4 (ENSUPAG00010012018)	NAA10 (ENSUPAG00010011976)	RENBP (ENSUPAG00010011941)	HCFC1 (ENSUPAG00010011877)
Squirrel	MODERN SPECIES	409						ENSSTOG00000032558	ZNF275 (ENSSTOG00000022633)	ENSSTOG00000033034	ENSSTOG00000029369	ZFP92 (ENSSTOG00000009126) #21	TREX2 (ENSSTOG00000027213) #20	HAUS7 (ENSSTOG00000022988) #19	BGN (ENSSTOG00000008058) #18	ATP2B3 (ENSSTOG00000008068) #17	CCNQ (ENSSTOG00000008103)	DUSP9 (ENSSTOG00000008115) #22	PNCK (ENSSTOG00000008119) #23	ENSSTOG00000026886 #24	BCAP31 (ENSSTOG00000008138)	ABCD1 (ENSSTOG00000008153)	ENSSTOG00000008188	PLXNB3 (ENSSTOG00000008197)	SRPK3 (ENSSTOG00000008233)	IDH3G (ENSSTOG00000008261)	SSR4 (ENSSTOG00000008278)	PDZD4 (ENSSTOG00000021423)	L1CAM (ENSSTOG00000008316)	AVPR2 (ENSSTOG00000008352)	ARHGAP4 (ENSSTOG00000022503)	NAA10 (ENSSTOG00000010237)	RENBP (ENSSTOG00000010247)