Euteleostomi ANCESTRAL SPECIES 763 ENSGT01030000236954 ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 Actinopterygii ANCESTRAL SPECIES 46 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000159972 ENSGT00950000182993.A.a #17 ENSGT00390000012434 ENSGT00390000007212 ENSGT00940000166580 ENSGT00530000063553.b.a ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000006166 ENSGT00390000016851 ENSGT00940000157019 ENSGT00390000007029 ENSGT00390000012240 ENSGT00390000007336 ENSGT00510000049316 Neopterygii ANCESTRAL SPECIES 69 ENSGT00940000164495 #27 ENSGT00940000157924 #26 ENSGT00940000157246.a #24 ENSGT00940000157178 ENSGT01030000234542.b.b.a.a.a.b #25 ENSGT00940000157246.b ##24 ENSGT00940000161678 ENSGT00940000160466 #23 ENSGT00390000002877 ENSGT00390000005338 ENSGT00900000141362 #19 ENSGT00940000165287 #20 ENSGT00940000160888 ENSGT01030000235192 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000159972 ENSGT00950000182993.A.a #17 ENSGT00390000012434 ENSGT00390000007212 ENSGT00940000162714 ENSGT00530000063553.b.a ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000006166 ENSGT00390000016851 ENSGT00940000157019 ENSGT00390000007029 ENSGT00390000012240 ENSGT00390000007336 ENSGT00510000049316 Osteoglossocephalai ANCESTRAL SPECIES 180 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a ##25 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT00940000155916 ENSGT00390000018044.b.b ENSGT00390000001201 ENSGT00390000013811 ENSGT00390000005338 ENSGT00900000141362.a.b ##19 ENSGT00940000165287.a.b ##20 ENSGT00940000160888 ENSGT01030000235192 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.xb #25 ENSGT01030000234542.b.b.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000164495.c.b ##27 ENSGT00940000155438.b ##28 ENSGT00390000012078.a.a ENSGT00950000182915.b.b.a.b #29 ENSGT00390000002505 ENSGT00730000111147 Clupeocephala ANCESTRAL SPECIES 4 ENSGT00390000016532 ENSGT00390000010427.c ENSGT00940000155464.a.a ##33 ENSGT00940000161387 ENSGT00390000006320 ENSGT00390000007918 ENSGT00950000182993.A.a.j #17 ENSGT00390000018651.a ENSGT00940000156466 ENSGT00510000048500 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.b ##20 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157178.g ENSGT00940000157924 #26 ENSGT00940000164495.c.b ##27 ENSGT00940000155438.b ##28 ENSGT00390000012078.a.a ENSGT00950000182915.b.b.a.b.c.a ##29 ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000163917.a.a ##31 ENSGT00940000160775 ENSGT00940000162148 ENSGT00970000198139 Euteleosteomorpha ANCESTRAL SPECIES 46 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008557 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.b ##20 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157178.g ENSGT00940000157924 #26 ENSGT00940000164495.c.b ##27 ENSGT00940000155438.b ##28 ENSGT00390000012078.a.a ENSGT00950000182915.b.b.a.b.c.a ##29 ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000163917.a.a ##31 ENSGT00940000160775 ENSGT00940000162148 ENSGT00970000198139 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.b ##20 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157178.g ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.b ##20 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157178.g ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.b ##20 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.b ##27 ENSGT00940000155438.b ##28 ENSGT00390000012078.a.a ENSGT00950000182915.b.b.a.b.c.a ##29 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 Anabantaria ANCESTRAL SPECIES 8 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 Anabantoidei ANCESTRAL SPECIES 18 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.xb #25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 Climbing perch MODERN SPECIES 8 ENSATEG00000020820 #7 ndc1 (ENSATEG00000020871) #8 zgc:113691 (ENSATEG00000020910) #9 yipf1 (ENSATEG00000020920) #10 lrrc42 (ENSATEG00000020965) #11 tmem59 (ENSATEG00000020933) #12 TCEANC2 (ENSATEG00000020971) #13 CDCP2 (ENSATEG00000020980) #14 ENSATEG00000021032 #15 ENSATEG00000021222 #16 ENSATEG00000027297 #17 ranbp3b (ENSATEG00000021252) #18 ENSATEG00000021305 #19 ENSATEG00000021312 #20 pnhd (ENSATEG00000021324) #21 admp (ENSATEG00000021331) #22 CIB3 (ENSATEG00000021337) #23 rab8a (ENSATEG00000021347) #24 tpm4b (ENSATEG00000021359) #25 ap1m1 (ENSATEG00000021388) #26 klf2b (ENSATEG00000021417) #27 ENSATEG00000021431 #28 ENSATEG00000021467 #29 ENSATEG00000021516 #30 rx2 (ENSATEG00000021571) #31 cplx4c (ENSATEG00000021592) #32 ENSATEG00000021624 #33 ENSATEG00000021806 #34 nmrk2 (ENSATEG00000021836) #35 loxl5b (ENSATEG00000021850) #36 ENSATEG00000030020 #37 Siamese fighting fish MODERN SPECIES 8 vav3b (ENSBSLG00000019459) DCAF8 (ENSBSLG00000019688) #7 ndc1 (ENSBSLG00000019697) #8 zgc:113691 (ENSBSLG00000019959) #9 yipf1 (ENSBSLG00000019962) #10 lrrc42 (ENSBSLG00000019978) #11 tmem59 (ENSBSLG00000019992) #12 tceanc2 (ENSBSLG00000020017) #13 CDCP2 (ENSBSLG00000020022) #14 ptprfb (ENSBSLG00000020272) #15 NRTN (ENSBSLG00000025001) #17 ranbp3b (ENSBSLG00000025006) #18 ENSBSLG00000025414 #19 ENSBSLG00000025463 #20 pnhd (ENSBSLG00000025471) #21 admp (ENSBSLG00000025477) #22 CIB3 (ENSBSLG00000025480) #23 rab8a (ENSBSLG00000025494) #24 tpm4b (ENSBSLG00000025568) #25 ap1m1 (ENSBSLG00000025820) #26 ENSBSLG00000025946 ENSBSLG00000026013 #28 ENSBSLG00000026085 #29 rx2 (ENSBSLG00000026109) #31 cplx4c (ENSBSLG00000026113) #32 ATCAY (ENSBSLG00000026123) #34 nmrk2 (ENSBSLG00000026127) #35 loxl5b (ENSBSLG00000026129) #36 ENSBSLG00000026138 #37 mfsd14a2 (ENSBSLG00000026162) insra (ENSBSLG00000026284) Zig-zag eel MODERN SPECIES 8 ENSMAMG00000005688 #7 ndc1 (ENSMAMG00000005670) #8 zgc:113691 (ENSMAMG00000005656) #9 yipf1 (ENSMAMG00000005639) #10 lrrc42 (ENSMAMG00000026926) #11 tmem59 (ENSMAMG00000025075) #12 TCEANC2 (ENSMAMG00000005605) #13 CDCP2 (ENSMAMG00000005611) #14 ENSMAMG00000005522 #15 ENSMAMG00000005509 #16 ENSMAMG00000005503 #17 ranbp3b (ENSMAMG00000005453) #18 ENSMAMG00000005434 #19 ENSMAMG00000005430 #20 pnhd (ENSMAMG00000024571) #21 admp (ENSMAMG00000005408) #22 ENSMAMG00000005160 #33 ENSMAMG00000026876 #23 rab8a (ENSMAMG00000004673) #24 ENSMAMG00000004619 ##25 ap1m1 (ENSMAMG00000004566) #26 klf2b (ENSMAMG00000004549) #27 ENSMAMG00000004501 #28 ENSMAMG00000004470 #29 rx2 (ENSMAMG00000004421) #31 cplx4c (ENSMAMG00000004404) #32 ENSMAMG00000027625 #33 ENSMAMG00000024656 #33 ENSMAMG00000002438 #34 nmrk2 (ENSMAMG00000027862) #35 loxl5b (ENSMAMG00000027833) #36 Carangaria ANCESTRAL SPECIES 5 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00940000155252.fb.b ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a Turbot MODERN SPECIES 19 vav3b (ENSSMAG00000013925) ENSSMAG00000014025 #7 ndc1 (ENSSMAG00000014081) #8 zgc:113691 (ENSSMAG00000014112) #9 yipf1 (ENSSMAG00000014125) #10 lrrc42 (ENSSMAG00000014131) #11 tmem59 (ENSSMAG00000035756) #12 TCEANC2 (ENSSMAG00000014195) #13 CDCP2 (ENSSMAG00000023436) #14 ENSSMAG00000014209 #15 ENSSMAG00000014524 #17 ranbp3b (ENSSMAG00000014567) #18 ENSSMAG00000014627 #19 ENSSMAG00000014650 #20 pnhd (ENSSMAG00000014669) #21 admp (ENSSMAG00000014741) #22 ENSSMAG00000014749 #33 CIB3 (ENSSMAG00000014773) #23 rab8a (ENSSMAG00000032645) #24 TPM4 (ENSSMAG00000014803) #25 ap1m1 (ENSSMAG00000014843) #26 ENSSMAG00000014887 ENSSMAG00000014898 #28 ENSSMAG00000014926 #29 rx2 (ENSSMAG00000014946) #31 cplx4c (ENSSMAG00000014957) #32 ENSSMAG00000014972 #33 ENSSMAG00000015350 #34 nmrk2 (ENSSMAG00000015396) #35 loxl5b (ENSSMAG00000015408) #36 ENSSMAG00000015444 #37 Tongue sole MODERN SPECIES 12 vav3b (ENSCSEG00000016172) ENSCSEG00000016162 DCAF8 (ENSCSEG00000016154) #7 ndc1 (ENSCSEG00000016105) #8 yipf1 (ENSCSEG00000016081) #10 tmem59 (ENSCSEG00000016074) #12 CDCP2 (ENSCSEG00000016073) #14 tceanc2 (ENSCSEG00000016065) #13 ENSCSEG00000016062 #14 ENSCSEG00000016049 #15 ptprfb (ENSCSEG00000015922) #15 NRTN (ENSCSEG00000015897) #17 ranbp3b (ENSCSEG00000015885) #18 ENSCSEG00000015875 #19 pnhd (ENSCSEG00000015870) #21 admp (ENSCSEG00000015845) #22 CIB3 (ENSCSEG00000015836) #23 ENSCSEG00000015760 #33 rab8a (ENSCSEG00000015716) #24 TPM4 (ENSCSEG00000015696) ##25 ap1m1 (ENSCSEG00000015635) #26 klf2b (ENSCSEG00000015625) #27 ENSCSEG00000015603 #28 ENSCSEG00000015580 #29 rx2 (ENSCSEG00000015566) #31 ENSCSEG00000015562 #33 ATCAY (ENSCSEG00000015532) #34 nmrk2 (ENSCSEG00000015523) #35 loxl5b (ENSCSEG00000015516) #36 ENSCSEG00000014556 #37 mfsd14a2 (ENSCSEG00000014520) Carangaria_A ANCESTRAL SPECIES 2 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00940000179442 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 Seriola ANCESTRAL SPECIES 45 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 Yellowtail amberjack MODERN SPECIES 3098 ranbp3b (ENSSLDG00000009200) #18 ENSSLDG00000009305 #19 ENSSLDG00000009311 #20 pnhd (ENSSLDG00000009328) #21 admp (ENSSLDG00000009383) #22 ENSSLDG00000009439 #33 CIB3 (ENSSLDG00000009713) #23 rab8a (ENSSLDG00000009731) #24 TPM4 (ENSSLDG00000009760) ##25 ap1m1 (ENSSLDG00000009850) #26 klf2b (ENSSLDG00000009910) #27 ENSSLDG00000009931 #28 ENSSLDG00000010003 #29 DNAH8 (ENSSLDG00000010077) #30 rx2 (ENSSLDG00000010289) #31 ENSSLDG00000010314 #33 ATCAY (ENSSLDG00000010332) #34 nmrk2 (ENSSLDG00000010406) #35 loxl5b (ENSSLDG00000010821) #36 ENSSLDG00000010862 #37 Greater amberjack MODERN SPECIES 99 DCAF8 (ENSSDUG00000009512) #7 ndc1 (ENSSDUG00000009613) #8 yipf1 (ENSSDUG00000009665) #10 lrrc42 (ENSSDUG00000009704) #11 tmem59 (ENSSDUG00000009718) #12 tceanc2 (ENSSDUG00000009728) #13 CDCP2 (ENSSDUG00000009747) #14 ENSSDUG00000009774 #14 ptprfb (ENSSDUG00000009788) #15 ENSSDUG00000009842 #16 NRTN (ENSSDUG00000009853) #17 ranbp3b (ENSSDUG00000009893) #18 ENSSDUG00000009997 #19 ENSSDUG00000010013 #20 pnhd (ENSSDUG00000010033) #21 admp (ENSSDUG00000010089) #22 ENSSDUG00000010120 #33 CIB3 (ENSSDUG00000010171) #23 rab8a (ENSSDUG00000010203) #24 TPM4 (ENSSDUG00000010212) ##25 ap1m1 (ENSSDUG00000010253) #26 klf2b (ENSSDUG00000010309) #27 ENSSDUG00000010331 #28 ENSSDUG00000010450 #29 DNAH8 (ENSSDUG00000010493) #30 rx2 (ENSSDUG00000010646) #31 ENSSDUG00000010767 #33 ATCAY (ENSSDUG00000011755) #34 nmrk2 (ENSSDUG00000011777) #35 loxl5b (ENSSDUG00000011790) #36 ENSSDUG00000011828 #37 Barramundi perch MODERN SPECIES 74 DCAF8 (ENSLCAG00010020485) #7 ndc1 (ENSLCAG00010020471) #8 zgc:113691 (ENSLCAG00010020464) #9 yipf1 (ENSLCAG00010020458) #10 lrrc42 (ENSLCAG00010020454) #11 tmem59 (ENSLCAG00010020447) #12 tceanc2 (ENSLCAG00010020443) #13 CDCP2 (ENSLCAG00010020436) #14 ptprfb (ENSLCAG00010017520) #15 ENSLCAG00010017173 #16 NRTN (ENSLCAG00010017171) #17 ranbp3b (ENSLCAG00010017142) #18 ENSLCAG00010017138 #19 ENSLCAG00010017137 #20 pnhd (ENSLCAG00010017136) #21 admp (ENSLCAG00010017132) #22 CIB3 (ENSLCAG00010017122) #23 rab8a (ENSLCAG00010017119) #24 TPM4 (ENSLCAG00010017093) ##25 ap1m1 (ENSLCAG00010017067) #26 klf2b (ENSLCAG00010017056) #27 ENSLCAG00010017034 #28 ENSLCAG00010017004 #29 DNAH8 (ENSLCAG00010016949) #30 rx2 (ENSLCAG00010016937) #31 ENSLCAG00010016936 ENSLCAG00010016452 #33 ATCAY (ENSLCAG00010016334) #34 nmrk2 (ENSLCAG00010016330) #35 loxl5b (ENSLCAG00010016325) #36 ENSLCAG00010016322 #37 Eupercaria ANCESTRAL SPECIES 24 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 ENSGT00940000164530 Tetraodontidae ANCESTRAL SPECIES 37 ENSGT00940000155252.fb.b ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000155464.b #33 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000169355.b ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a ENSGT00940000157375.d Tetraodon MODERN SPECIES 7 NTNG1 (ENSTNIG00000014878) vav3b (ENSTNIG00000014879) DCAF8 (ENSTNIG00000014880) #7 ndc1 (ENSTNIG00000014881) #8 zgc:113691 (ENSTNIG00000014882) #9 ENSTNIG00000000812 lrrc42 (ENSTNIG00000014883) #11 tmem59 (ENSTNIG00000014884) #12 ENSTNIG00000014885 CDCP2 (ENSTNIG00000014886) #14 ptprfb (ENSTNIG00000014887) #15 NRTN (ENSTNIG00000014888) #17 ranbp3b (ENSTNIG00000014889) #18 ENSTNIG00000014890 #20 pnhd (ENSTNIG00000014891) #21 admp (ENSTNIG00000014892) #22 ENSTNIG00000014893 #33 CIB3 (ENSTNIG00000014894) #23 rab8a (ENSTNIG00000014895) #24 ENSTNIG00000014896 ##25 ENSTNIG00000014897 ENSTNIG00000014898 ENSTNIG00000014899 #28 ENSTNIG00000014900 ##29 rx2 (ENSTNIG00000014901) #31 loxl5b (ENSTNIG00000014902) #36 ENSTNIG00000014903 #37 mfsd14a2 (ENSTNIG00000014904) insra (ENSTNIG00000014905) arhgef18a (ENSTNIG00000014906) sppl2 (ENSTNIG00000014908) Fugu MODERN SPECIES 14 vav3b (ENSTRUG00000012168) DCAF8 (ENSTRUG00000022875) #7 ndc1 (ENSTRUG00000011897) #8 zgc:113691 (ENSTRUG00000011896) #9 yipf1 (ENSTRUG00000011872) #10 lrrc42 (ENSTRUG00000025122) #11 tmem59 (ENSTRUG00000011748) #12 tceanc2 (ENSTRUG00000030275) #13 CDCP2 (ENSTRUG00000011688) #14 ptprfb (ENSTRUG00000021870) #15 NRTN (ENSTRUG00000032797) #17 ranbp3b (ENSTRUG00000011329) #18 ENSTRUG00000021512 #19 ENSTRUG00000011305 #20 pnhd (ENSTRUG00000011281) #21 admp (ENSTRUG00000011210) #22 ENSTRUG00000031561 #33 CIB3 (ENSTRUG00000010744) #23 rab8a (ENSTRUG00000025256) #24 TPM4 (ENSTRUG00000010332) ##25 ap1m1 (ENSTRUG00000010097) #26 ENSTRUG00000023012 ENSTRUG00000009788 #28 ENSTRUG00000009578 #29 rx2 (ENSTRUG00000009519) #31 ATCAY (ENSTRUG00000009394) #34 nmrk2 (ENSTRUG00000009269) #35 loxl5b (ENSTRUG00000009159) #36 ENSTRUG00000030471 #37 mfsd14a2 (ENSTRUG00000008341) insra (ENSTRUG00000007600) Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 ENSGT00940000164530 Ballan wrasse MODERN SPECIES 1 DCAF8 (ENSLBEG00000015687) #7 ndc1 (ENSLBEG00000015737) #8 yipf1 (ENSLBEG00000015780) #10 lrrc42 (ENSLBEG00000015820) #11 tmem59 (ENSLBEG00000015848) #12 tceanc2 (ENSLBEG00000015871) #13 CDCP2 (ENSLBEG00000015893) #14 ENSLBEG00000015917 ptprfb (ENSLBEG00000016097) #15 ENSLBEG00000016460 #16 NRTN (ENSLBEG00000016504) #17 ranbp3b (ENSLBEG00000016536) #18 ENSLBEG00000016608 #19 ENSLBEG00000016621 #20 pnhd (ENSLBEG00000016641) #21 admp (ENSLBEG00000016703) #22 CIB3 (ENSLBEG00000016727) #23 rab8a (ENSLBEG00000016748) #24 TPM4 (ENSLBEG00000016792) ##25 ap1m1 (ENSLBEG00000016846) #26 ENSLBEG00000017196 ENSLBEG00000016982 #28 ENSLBEG00000017234 #29 DNAH8 (ENSLBEG00000017300) #30 rx2 (ENSLBEG00000017513) #31 ATCAY (ENSLBEG00000017524) #34 nmrk2 (ENSLBEG00000017551) #35 loxl5b (ENSLBEG00000017563) #36 ENSLBEG00000017617 #37 mfsd14a2 (ENSLBEG00000017705) ENSLBEG00000017755 Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 ENSGT00940000164530 Perciformes ANCESTRAL SPECIES 5 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 ENSGT00940000164530 Perciformes_a ANCESTRAL SPECIES 17 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00940000163917.a.b #31 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a ENSGT00940000157375.d ENSGT00940000158753 Pike perch MODERN SPECIES 12 ENSSLUG00000013534 DCAF8 (ENSSLUG00000013549) #7 ndc1 (ENSSLUG00000013606) #8 zgc:113691 (ENSSLUG00000013740) #9 yipf1 (ENSSLUG00000013750) #10 lrrc42 (ENSSLUG00000013773) #11 tmem59 (ENSSLUG00000013781) #12 tceanc2 (ENSSLUG00000013788) #13 CDCP2 (ENSSLUG00000013802) #14 ptprfb (ENSSLUG00000014459) #15 larp6b (ENSSLUG00000021679) #16 NRTN (ENSSLUG00000021683) #17 ranbp3b (ENSSLUG00000021708) #18 ENSSLUG00000021733 #19 pnhd (ENSSLUG00000021736) #21 admp (ENSSLUG00000021741) #22 CIB3 (ENSSLUG00000021748) #23 rab8a (ENSSLUG00000021756) #24 TPM4 (ENSSLUG00000021784) ##25 ap1m1 (ENSSLUG00000021921) #26 klf2b (ENSSLUG00000021931) #27 ENSSLUG00000022021 #28 rx2 (ENSSLUG00000022991) #31 ENSSLUG00000023026 #33 ATCAY (ENSSLUG00000023110) #34 ENSSLUG00000023122 nmrk2 (ENSSLUG00000023127) #35 loxl5b (ENSSLUG00000023134) #36 ENSSLUG00000023194 #37 mfsd14a2 (ENSSLUG00000023580) insra (ENSSLUG00000023795) Channel bull blenny MODERN SPECIES 8 vav3b (ENSCGOG00000016466) DCAF8 (ENSCGOG00000017947) #7 ndc1 (ENSCGOG00000018006) #8 zgc:113691 (ENSCGOG00000018009) #9 yipf1 (ENSCGOG00000018010) #10 lrrc42 (ENSCGOG00000018012) #11 tmem59 (ENSCGOG00000018016) #12 tceanc2 (ENSCGOG00000018019) #13 CDCP2 (ENSCGOG00000018023) #14 ptprfb (ENSCGOG00000018196) #15 NRTN (ENSCGOG00000023378) #17 ranbp3b (ENSCGOG00000023383) #18 ENSCGOG00000023471 #19 ENSCGOG00000023480 #20 pnhd (ENSCGOG00000023482) #21 admp (ENSCGOG00000023485) #22 CIB3 (ENSCGOG00000023488) #23 rab8a (ENSCGOG00000023494) #24 TPM4 (ENSCGOG00000023639) ##25 ap1m1 (ENSCGOG00000024195) #26 klf2b (ENSCGOG00000024277) #27 ENSCGOG00000024301 #28 calr3a (ENSCGOG00000024377) ENSCGOG00000024380 rx2 (ENSCGOG00000024381) #31 ATCAY (ENSCGOG00000024382) #34 nmrk2 (ENSCGOG00000024385) #35 loxl5b (ENSCGOG00000024389) #36 ENSCGOG00000024404 #37 mfsd14a2 (ENSCGOG00000024457) insra (ENSCGOG00000024530) Cottioidei ANCESTRAL SPECIES 22 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 ENSGT00940000164530 Stickleback MODERN SPECIES 2 ENSGACG00000016740 NTNG1 (ENSGACG00000016776) vav3b (ENSGACG00000016779) DCAF8 (ENSGACG00000016788) #7 ndc1 (ENSGACG00000016789) #8 yipf1 (ENSGACG00000016795) #10 lrrc42 (ENSGACG00000016801) #11 tmem59 (ENSGACG00000016804) #12 tceanc2 (ENSGACG00000016816) #13 CDCP2 (ENSGACG00000016818) #14 ptprfb (ENSGACG00000016820) #15 NRTN (ENSGACG00000016823) #17 ranbp3b (ENSGACG00000016825) #18 ENSGACG00000016838 #20 pnhd (ENSGACG00000016840) #21 admp (ENSGACG00000016841) #22 CIB3 (ENSGACG00000016844) #23 rab8a (ENSGACG00000016850) #24 TPM4 (ENSGACG00000016865) ##25 ap1m1 (ENSGACG00000016883) #26 klf2b (ENSGACG00000016890) #27 ENSGACG00000016893 #28 ENSGACG00000016898 #29 rx2 (ENSGACG00000016904) #31 ATCAY (ENSGACG00000016905) #34 loxl5b (ENSGACG00000016914) #36 ENSGACG00000016917 ENSGACG00000016918 #37 mfsd14a2 (ENSGACG00000016925) insra (ENSGACG00000016929) arhgef18a (ENSGACG00000016935) Lumpfish MODERN SPECIES 8 vav3b (ENSCLMG00005022909) DCAF8 (ENSCLMG00005022904) #7 ndc1 (ENSCLMG00005022895) #8 zgc:113691 (ENSCLMG00005022894) #9 yipf1 (ENSCLMG00005022893) #10 lrrc42 (ENSCLMG00005022892) #11 tmem59 (ENSCLMG00005022891) #12 tceanc2 (ENSCLMG00005022890) #13 CDCP2 (ENSCLMG00005022889) #14 ptprfb (ENSCLMG00005020849) #15 ENSCLMG00005020743 #16 NRTN (ENSCLMG00005020741) #17 ranbp3b (ENSCLMG00005020719) #18 ENSCLMG00005020711 #19 pnhd (ENSCLMG00005020707) #21 admp (ENSCLMG00005020706) #22 CIB3 (ENSCLMG00005020693) #23 rab8a (ENSCLMG00005020691) #24 TPM4 (ENSCLMG00005020486) ##25 ap1m1 (ENSCLMG00005020480) #26 ENSCLMG00005020479 ENSCLMG00005019530 #28 ENSCLMG00005019524 #29 ENSCLMG00005019523 #30 rx2 (ENSCLMG00005019518) #31 ENSCLMG00005019496 #33 ATCAY (ENSCLMG00005019493) #34 nmrk2 (ENSCLMG00005019484) #35 loxl5b (ENSCLMG00005019478) #36 ENSCLMG00005019375 #37 mfsd14a2 (ENSCLMG00005018750) Eupecaria_C ANCESTRAL SPECIES 26 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 Eupercaria_incertae_sedis ANCESTRAL SPECIES 30 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 European seabass MODERN SPECIES ENSDLAG00005023956 NTNG1 (ENSDLAG00005023943) vav3b (ENSDLAG00005022961) ENSDLAG00005022710 #7 ndc1 (ENSDLAG00005032722) #8 LRRC42 (ENSDLAG00005022636) #11 tmem59 (ENSDLAG00005022629) #12 TCEANC2 (ENSDLAG00005033498) #13 CDCP2 (ENSDLAG00005022623) #14 ENSDLAG00005011855 #15 ENSDLAG00005011516 #16 ENSDLAG00005011508 #17 ranbp3b (ENSDLAG00005011456) #18 ENSDLAG00005011442 #19 ENSDLAG00005031371 #20 admp (ENSDLAG00005011421) #22 CIB3 (ENSDLAG00005032165) #23 rab8a (ENSDLAG00005031001) #24 TPM4 (ENSDLAG00005028686) ##25 ap1m1 (ENSDLAG00005009875) #26 ENSDLAG00005034343 ENSDLAG00005007762 #28 ENSDLAG00005006021 #30 rx2 (ENSDLAG00005005932) #31 ENSDLAG00005005910 #33 ENSDLAG00005005799 #34 nmrk2 (ENSDLAG00005005781) #35 loxl5b (ENSDLAG00005005761) #36 ENSDLAG00005005742 #37 mfsd14a2 (ENSDLAG00005005155) insra (ENSDLAG00005002895) Large yellow croaker MODERN SPECIES 1 ENSLCRG00005018926 DCAF8 (ENSLCRG00005018925) #7 ndc1 (ENSLCRG00005018923) #8 zgc:113691 (ENSLCRG00005018922) #9 yipf1 (ENSLCRG00005018921) #10 lrrc42 (ENSLCRG00005018920) #11 tmem59 (ENSLCRG00005018919) #12 tceanc2 (ENSLCRG00005018918) #13 CDCP2 (ENSLCRG00005018917) #14 ptprfb (ENSLCRG00005002316) #15 ENSLCRG00005001994 #16 NRTN (ENSLCRG00005001991) #17 ranbp3b (ENSLCRG00005001595) #18 ENSLCRG00005001542 #19 pnhd (ENSLCRG00005001522) #21 admp (ENSLCRG00005001515) #22 CIB3 (ENSLCRG00005001499) #23 rab8a (ENSLCRG00005001473) #24 TPM4 (ENSLCRG00005014909) ##25 ap1m1 (ENSLCRG00005014825) #26 ENSLCRG00005014824 ENSLCRG00005012049 #28 ENSLCRG00005011462 #29 DNAH8 (ENSLCRG00005011437) #30 ENSLCRG00005011312 #33 ATCAY (ENSLCRG00005011305) #34 nmrk2 (ENSLCRG00005011304) #35 loxl5b (ENSLCRG00005011157) #36 ENSLCRG00005011017 #37 ENSLCRG00005011012 rps8a (ENSLCRG00005011011) Gilthead seabream MODERN SPECIES 13 DCAF8 (ENSSAUG00010024683) #7 ndc1 (ENSSAUG00010024870) #8 zgc:113691 (ENSSAUG00010024886) #9 yipf1 (ENSSAUG00010024888) #10 lrrc42 (ENSSAUG00010024889) #11 tmem59 (ENSSAUG00010024890) #12 tceanc2 (ENSSAUG00010024891) #13 CDCP2 (ENSSAUG00010024892) #14 ptprfb (ENSSAUG00010024954) #15 ENSSAUG00010026758 #16 NRTN (ENSSAUG00010026761) #17 ranbp3b (ENSSAUG00010026765) #18 CCL21 (ENSSAUG00010026773) #19 ENSSAUG00010026781 ##25 pnhd (ENSSAUG00010026837) #21 admp (ENSSAUG00010026841) #22 ENSSAUG00010026844 #33 CIB3 (ENSSAUG00010026848) #23 rab8a (ENSSAUG00010026850) #24 ap1m1 (ENSSAUG00010026856) #26 ENSSAUG00010026858 ENSSAUG00010026860 #28 ENSSAUG00010026872 #29 DNAH8 (ENSSAUG00010026887) #30 rx2 (ENSSAUG00010026895) #31 ENSSAUG00010026896 #33 ATCAY (ENSSAUG00010026897) #34 nmrk2 (ENSSAUG00010026899) #35 loxl5b (ENSSAUG00010026900) #36 ENSSAUG00010026901 #37 mfsd14a2 (ENSSAUG00010026916) Ovalentaria ANCESTRAL SPECIES 5 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 Aplocheiloidei ANCESTRAL SPECIES 11 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000169355 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 Mangrove rivulus MODERN SPECIES 17 vav3b (ENSKMAG00000020860) DCAF8 (ENSKMAG00000020898) #7 ndc1 (ENSKMAG00000020949) #8 yipf1 (ENSKMAG00000021019) #10 lrrc42 (ENSKMAG00000021032) #11 tmem59 (ENSKMAG00000021045) #12 ENSKMAG00000021054 tceanc2 (ENSKMAG00000021064) #13 CDCP2 (ENSKMAG00000021073) #14 ptprfb (ENSKMAG00000021139) #15 ENSKMAG00000021343 #17 ranbp3b (ENSKMAG00000021357) #18 ENSKMAG00000021382 #19 ENSKMAG00000021388 #20 pnhd (ENSKMAG00000021395) #21 admp (ENSKMAG00000021403) #22 CIB3 (ENSKMAG00000021413) #23 rab8a (ENSKMAG00000021422) #24 TPM4 (ENSKMAG00000021445) ##25 ap1m1 (ENSKMAG00000021466) #26 klf2b (ENSKMAG00000021486) #27 ENSKMAG00000021510 #28 rx2 (ENSKMAG00000021563) #31 cplx4c (ENSKMAG00000021571) #32 ENSKMAG00000021624 #33 ATCAY (ENSKMAG00000021719) #34 ENSKMAG00000021762 #33 ENSKMAG00000021886 #33 nmrk2 (ENSKMAG00000021956) #35 loxl5b (ENSKMAG00000021961) #36 ENSKMAG00000021966 #37 Turquoise killifish MODERN SPECIES 1618 LRRC42 (ENSNFUG00015020607) #11 tmem59 (ENSNFUG00015020609) #12 tceanc2 (ENSNFUG00015020622) #13 CDCP2 (ENSNFUG00015020625) #14 ENSNFUG00015020626 ENSNFUG00015020627 ENSNFUG00015020629 ENSNFUG00015020630 ptprfb (ENSNFUG00015020795) #15 ENSNFUG00015024653 #16 ENSNFUG00015024655 RANBP3 (ENSNFUG00015024656) #18 ENSNFUG00015024663 #19 ENSNFUG00015024665 #20 pnhd (ENSNFUG00015024690) #21 admp (ENSNFUG00015024691) #22 CIB3 (ENSNFUG00015024692) #23 ENSNFUG00015024696 #24 sppl2 (ENSNFUG00015024709) ARHGEF18A (ENSNFUG00015024732) insra (ENSNFUG00015024774) trpm5 (ENSNFUG00015024937) TRAF6 (ENSNFUG00015024945) ENSNFUG00015024948 ttc17 (ENSNFUG00015024960) HSD17B12B (ENSNFUG00015024988) ENSNFUG00015024992 loxl5b (ENSNFUG00015004712) #36 nmrk2 (ENSNFUG00015004742) #35 ATCAYB (ENSNFUG00015004751) #34 ENSNFUG00015004784 #33 Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155464.b #33 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b #31 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 ENSGT00940000164530 NAME_4 ANCESTRAL SPECIES 111 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155464.b #33 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b #31 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a Mummichog MODERN SPECIES 2265 ndc1 (ENSFHEG00000010829) #8 zgc:113691 (ENSFHEG00000010806) #9 yipf1 (ENSFHEG00000010795) #10 lrrc42 (ENSFHEG00000010769) #11 tmem59 (ENSFHEG00000010763) #12 tceanc2 (ENSFHEG00000010748) #13 CDCP2 (ENSFHEG00000010737) #14 ENSFHEG00000010714 #14 ptprfb (ENSFHEG00000010682) #15 ENSFHEG00000010409 #16 ENSFHEG00000010402 #17 ranbp3b (ENSFHEG00000010376) #18 ENSFHEG00000010294 #19 ENSFHEG00000010267 #20 pnhd (ENSFHEG00000010238) #21 admp (ENSFHEG00000010200) #22 CIB3 (ENSFHEG00000010181) #23 rab8a (ENSFHEG00000010167) #24 TPM4 (ENSFHEG00000010127) ##25 ap1m1 (ENSFHEG00000010097) #26 klf2b (ENSFHEG00000010037) #27 ENSFHEG00000010027 #28 ENSFHEG00000009995 #28 ENSFHEG00000009974 #29 ENSFHEG00000009905 #33 cplx4c (ENSFHEG00000000222) #32 rx2 (ENSFHEG00000009601) #31 ATCAY (ENSFHEG00000009585) #34 nmrk2 (ENSFHEG00000009578) #35 loxl5b (ENSFHEG00000009571) #36 ENSFHEG00000009535 #37 Sheepshead minnow MODERN SPECIES 249 vav3b (ENSCVAG00000012486) DCAF8 (ENSCVAG00000012427) #7 ndc1 (ENSCVAG00000012391) #8 yipf1 (ENSCVAG00000012362) #10 lrrc42 (ENSCVAG00000012344) #11 tmem59 (ENSCVAG00000012332) #12 tceanc2 (ENSCVAG00000012312) #13 CDCP2 (ENSCVAG00000012294) #14 ptprfb (ENSCVAG00000012259) #15 ENSCVAG00000012145 #16 ENSCVAG00000012111 #17 ranbp3b (ENSCVAG00000012090) #18 ENSCVAG00000012061 #19 ENSCVAG00000012040 #20 pnhd (ENSCVAG00000012025) #21 admp (ENSCVAG00000012012) #22 CIB3 (ENSCVAG00000011954) #23 rab8a (ENSCVAG00000011935) #24 TPM4 (ENSCVAG00000011898) ##25 ap1m1 (ENSCVAG00000011839) #26 klf2b (ENSCVAG00000011775) #27 ENSCVAG00000011766 #28 Poeciliinae ANCESTRAL SPECIES 6 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155464.b #33 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b #31 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 ENSGT00940000164530 Poecilia ANCESTRAL SPECIES 16 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.xb #25 ENSGT00940000177949 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155464.b #33 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b #31 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 NAME_6 ANCESTRAL SPECIES 11 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155464.b #33 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b #31 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00690000103893 ENSGT00940000164530 Sailfin molly MODERN SPECIES 75 ptprfb (ENSPLAG00000005295) #15 ENSPLAG00000005133 #16 ENSPLAG00000000093 #17 ranbp3b (ENSPLAG00000005103) #18 ENSPLAG00000005048 #19 ENSPLAG00000005040 #20 pnhd (ENSPLAG00000005026) #21 admp (ENSPLAG00000004992) #22 CIB3 (ENSPLAG00000004970) #23 rab8a (ENSPLAG00000004924) #24 ENSPLAG00000004903 ##25 ap1m1 (ENSPLAG00000004869) #26 klf2b (ENSPLAG00000004840) #27 ENSPLAG00000004806 #28 ENSPLAG00000004753 #29 ENSPLAG00000004706 #33 cplx4c (ENSPLAG00000004397) #32 rx2 (ENSPLAG00000004385) #31 ATCAY (ENSPLAG00000004369) #34 nmrk2 (ENSPLAG00000004333) #35 Amazon molly MODERN SPECIES 401 ptprfb (ENSPFOG00000000123) #15 ENSPFOG00000023972 #16 ENSPFOG00000000772 #17 ranbp3b (ENSPFOG00000000891) #18 ENSPFOG00000001038 #19 ENSPFOG00000001072 #20 pnhd (ENSPFOG00000001123) #21 admp (ENSPFOG00000001182) #22 CIB3 (ENSPFOG00000001268) #23 rab8a (ENSPFOG00000001392) #24 tpm4b (ENSPFOG00000001525) #25 ap1m1 (ENSPFOG00000001693) #26 klf2b (ENSPFOG00000001804) #27 ENSPFOG00000001932 #28 ENSPFOG00000002251 #29 ENSPFOG00000002333 #33 cplx4c (ENSPFOG00000002659) #32 rx2 (ENSPFOG00000002677) #31 ATCAY (ENSPFOG00000023322) #34 nmrk2 (ENSPFOG00000022405) #35 loxl5b (ENSPFOG00000002741) #36 ENSPFOG00000020950 ENSPFOG00000002967 #37 Guppy MODERN SPECIES 447 ndc1 (ENSPREG00000011482) #8 zgc:113691 (ENSPREG00000011522) #9 yipf1 (ENSPREG00000011539) #10 lrrc42 (ENSPREG00000011580) #11 tmem59 (ENSPREG00000011659) #12 tceanc2 (ENSPREG00000011727) #13 CDCP2 (ENSPREG00000011742) #14 ENSPREG00000011767 #14 ptprfb (ENSPREG00000011801) #15 ENSPREG00000011853 #16 ENSPREG00000011869 #17 ranbp3b (ENSPREG00000011887) #18 ENSPREG00000011968 #19 ENSPREG00000011988 #20 pnhd (ENSPREG00000012007) #21 admp (ENSPREG00000012066) #22 CIB3 (ENSPREG00000012084) #23 rab8a (ENSPREG00000012101) #24 tpm4b (ENSPREG00000012127) #25 ENSPREG00000012162 ap1m1 (ENSPREG00000012177) #26 klf2b (ENSPREG00000012250) #27 ENSPREG00000012272 #28 ENSPREG00000012309 #29 ENSPREG00000012428 #33 cplx4c (ENSPREG00000013180) #32 rx2 (ENSPREG00000013196) #31 ATCAY (ENSPREG00000013212) #34 nmrk2 (ENSPREG00000013253) #35 ENSPREG00000013268 ENSPREG00000013319 #37 Platyfish MODERN SPECIES 20 yipf1 (ENSXMAG00000000466) #10 lrrc42 (ENSXMAG00000000464) #11 tmem59 (ENSXMAG00000000462) #12 tceanc2 (ENSXMAG00000000457) #13 CDCP2 (ENSXMAG00000000451) #14 ENSXMAG00000026832 #14 ENSXMAG00000027854 ptprfb (ENSXMAG00000000386) #15 ENSXMAG00000025734 #16 ENSXMAG00000000684 #17 ENSXMAG00000029678 ranbp3b (ENSXMAG00000000676) #18 ENSXMAG00000000675 #19 ENSXMAG00000000673 #20 pnhd (ENSXMAG00000000672) #21 admp (ENSXMAG00000000671) #22 CIB3 (ENSXMAG00000000665) #23 rab8a (ENSXMAG00000029254) #24 TPM4 (ENSXMAG00000000647) ##25 ap1m1 (ENSXMAG00000000642) #26 klf2b (ENSXMAG00000000640) #27 ENSXMAG00000000632 #28 ENSXMAG00000026007 #29 ENSXMAG00000026318 #33 cplx4c (ENSXMAG00000020858) #32 rx2 (ENSXMAG00000021214) #31 ATCAY (ENSXMAG00000000615) #34 nmrk2 (ENSXMAG00000000613) #35 loxl5b (ENSXMAG00000000605) #36 ENSXMAG00000022805 ENSXMAG00000000591 #37 Oryzias ANCESTRAL SPECIES 12 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a ENSGT00940000157375.d Oryzias_a ANCESTRAL SPECIES 7 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a ENSGT00940000157375.d ENSGT00940000158753 Japanese Medaka HdrR MODERN SPECIES 8 zgc:113691 (ENSORLG00000024856) #9 yipf1 (ENSORLG00000020670) #10 lrrc42 (ENSORLG00000020671) #11 tmem59 (ENSORLG00000020673) #12 tceanc2 (ENSORLG00000027177) #13 CDCP2 (ENSORLG00000024995) #14 ENSORLG00000025198 #14 ENSORLG00000022344 ENSORLG00000026851 ptprfb (ENSORLG00000018046) #15 NRTN (ENSORLG00000018042) #17 ranbp3b (ENSORLG00000018039) #18 ENSORLG00000018031 #19 ENSORLG00000018030 #20 pnhd (ENSORLG00000025552) #21 admp (ENSORLG00000018027) #22 CIB3 (ENSORLG00000018025) #23 rab8a (ENSORLG00000018023) #24 TPM4 (ENSORLG00000018019) ##25 ap1m1 (ENSORLG00000018017) #26 klf2b (ENSORLG00000018015) #27 ENSORLG00000018011 #29 rx2 (ENSORLG00000018007) #31 cplx4c (ENSORLG00000018003) #32 ENSORLG00000018000 #34 nmrk2 (ENSORLG00000017998) #35 ENSORLG00000018014 #28 loxl5b (ENSORLG00000017995) #36 ENSORLG00000026342 #37 mfsd14a2 (ENSORLG00000017988) insra (ENSORLG00000017980) Chinese medaka MODERN SPECIES 4379 admp (ENSOSIG00000002154) #22 Oryzias_b ANCESTRAL SPECIES 8 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a ENSGT00940000157375.d Indian medaka MODERN SPECIES 10 yipf1 (ENSOMEG00000013443) #10 lrrc42 (ENSOMEG00000013418) #11 tmem59 (ENSOMEG00000013363) #12 tceanc2 (ENSOMEG00000013247) #13 CDCP2 (ENSOMEG00000013213) #14 ENSOMEG00000013196 ENSOMEG00000013185 ENSOMEG00000013171 ENSOMEG00000013160 ptprfb (ENSOMEG00000013142) #15 NRTN (ENSOMEG00000013088) #17 ranbp3b (ENSOMEG00000013062) #18 ENSOMEG00000013004 #19 ENSOMEG00000012983 #20 pnhd (ENSOMEG00000012961) #21 admp (ENSOMEG00000012921) #22 CIB3 (ENSOMEG00000012888) #23 rab8a (ENSOMEG00000012861) #24 ENSOMEG00000012811 ##25 ap1m1 (ENSOMEG00000012780) #26 ENSOMEG00000012740 klf2b (ENSOMEG00000012631) #27 ENSOMEG00000012717 #28 ENSOMEG00000012610 #29 rx2 (ENSOMEG00000012577) #31 cplx4c (ENSOMEG00000012566) #32 ATCAY (ENSOMEG00000012545) #34 nmrk2 (ENSOMEG00000012522) #35 loxl5b (ENSOMEG00000012481) #36 ENSOMEG00000012401 #37 mfsd14a2 (ENSOMEG00000012384) Javanese ricefish MODERN SPECIES 8 DCAF8 (ENSOJAG00000016951) #7 yipf1 (ENSOJAG00000016138) #10 lrrc42 (ENSOJAG00000016126) #11 tmem59 (ENSOJAG00000016084) #12 tceanc2 (ENSOJAG00000016076) #13 CDCP2 (ENSOJAG00000016073) #14 ENSOJAG00000016066 ENSOJAG00000016062 ENSOJAG00000010072 #16 NRTN (ENSOJAG00000010045) #17 ranbp3b (ENSOJAG00000009934) #18 ENSOJAG00000009913 #19 ENSOJAG00000009906 #20 ENSOJAG00000009877 #20 pnhd (ENSOJAG00000009852) #21 admp (ENSOJAG00000023119) #22 CIB3 (ENSOJAG00000023117) #23 rab8a (ENSOJAG00000023104) #24 ENSOJAG00000023051 ##25 ap1m1 (ENSOJAG00000022995) #26 klf2b (ENSOJAG00000022988) #27 ENSOJAG00000022973 #28 rx2 (ENSOJAG00000022963) #31 cplx4c (ENSOJAG00000022961) #32 ATCAY (ENSOJAG00000022959) #34 nmrk2 (ENSOJAG00000022950) #35 loxl5b (ENSOJAG00000022926) #36 insra (ENSOJAG00000022139) arhgef18a (ENSOJAG00000022095) sppl2 (ENSOJAG00000021875) DAPK3 (ENSOJAG00000021853) Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a Pomacentridae ANCESTRAL SPECIES 45 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00940000179442 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000156845.x #37 ENSGT00940000164530 Pomacentridae_A ANCESTRAL SPECIES 61 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992.bb #30 ENSGT00940000163917.a.b #31 ENSGT00940000179442 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000156845.x #37 Amphiprion ANCESTRAL SPECIES 66 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992.bb #30 ENSGT00940000163917.a.b #31 ENSGT00940000179442 ENSGT00940000155464.b #33 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000156845.x #37 Clown anemonefish MODERN SPECIES 1489 ENSAOCG00000004639 ##15 larp6b (ENSAOCG00000004646) #16 NRTN (ENSAOCG00000004658) #17 ranbp3b (ENSAOCG00000004683) #18 ENSAOCG00000004720 #19 ENSAOCG00000004749 #20 pnhd (ENSAOCG00000004766) #21 admp (ENSAOCG00000004780) #22 CIB3 (ENSAOCG00000004805) #23 rab8a (ENSAOCG00000004831) #24 TPM4 (ENSAOCG00000000188) ##25 ap1m1 (ENSAOCG00000004909) #26 klf2b (ENSAOCG00000004915) #27 ENSAOCG00000004965 #28 ENSAOCG00000004988 #29 Orange clownfish MODERN SPECIES 1 DCAF8 (ENSAPEG00000023020) #7 ndc1 (ENSAPEG00000022929) #8 yipf1 (ENSAPEG00000022894) #10 lrrc42 (ENSAPEG00000022886) #11 tmem59 (ENSAPEG00000022871) #12 tceanc2 (ENSAPEG00000022855) #13 CDCP2 (ENSAPEG00000022844) #14 ENSAPEG00000022836 #14 ptprfb (ENSAPEG00000022767) #15 larp6b (ENSAPEG00000022748) #16 ENSAPEG00000022733 #17 ranbp3b (ENSAPEG00000022712) #18 ENSAPEG00000022693 #19 ENSAPEG00000022686 #20 pnhd (ENSAPEG00000022677) #21 admp (ENSAPEG00000022668) #22 CIB3 (ENSAPEG00000022653) #23 rab8a (ENSAPEG00000022630) #24 TPM4 (ENSAPEG00000022600) ##25 ap1m1 (ENSAPEG00000022565) #26 klf2b (ENSAPEG00000022551) #27 ENSAPEG00000022516 #28 ENSAPEG00000022461 #29 rx2 (ENSAPEG00000022400) #31 ENSAPEG00000022389 ENSAPEG00000022090 #33 ATCAY (ENSAPEG00000022029) #34 nmrk2 (ENSAPEG00000022020) #35 loxl5b (ENSAPEG00000021983) #36 ENSAPEG00000021943 #37 mfsd14a2 (ENSAPEG00000021916) Spiny chromis MODERN SPECIES 544 ptprfb (ENSAPOG00000003809) #15 ENSAPOG00000003568 #16 NRTN (ENSAPOG00000003558) #17 ranbp3b (ENSAPOG00000003546) #18 ENSAPOG00000003504 #19 ENSAPOG00000003486 #20 pnhd (ENSAPOG00000003384) #21 admp (ENSAPOG00000003351) #22 CIB3 (ENSAPOG00000003334) #23 rab8a (ENSAPOG00000003307) #24 ENSAPOG00000003253 ##25 ap1m1 (ENSAPOG00000003175) #26 klf2b (ENSAPOG00000003124) #27 ENSAPOG00000003110 #28 ENSAPOG00000003056 #29 Bicolor damselfish MODERN SPECIES 295 ptprfb (ENSSPAG00000014356) #15 larp6b (ENSSPAG00000014320) #16 ENSSPAG00000014305 #17 ranbp3b (ENSSPAG00000014218) #18 ENSSPAG00000014192 #19 ENSSPAG00000013935 #20 pnhd (ENSSPAG00000013863) #21 admp (ENSSPAG00000013820) #22 CIB3 (ENSSPAG00000013789) #23 rab8a (ENSSPAG00000013771) #24 TPM4 (ENSSPAG00000013716) ##25 ap1m1 (ENSSPAG00000013678) #26 klf2b (ENSSPAG00000013663) #27 ENSSPAG00000013587 #28 ENSSPAG00000013551 #29 rx2 (ENSSPAG00000013540) #31 ENSSPAG00000013255 #33 ATCAY (ENSSPAG00000013203) #34 nmrk2 (ENSSPAG00000013193) #35 loxl5b (ENSSPAG00000013170) #36 ENSSPAG00000013065 #37 mfsd14a2 (ENSSPAG00000013017) insra (ENSSPAG00000012933) Cichlidae ANCESTRAL SPECIES 2 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000169355 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000169355 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000169355 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000164530 ENSGT00940000155404.i.a Haplochromini ANCESTRAL SPECIES 2 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000169355 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000156845.v #37 ENSGT00940000164530 Burton s mouthbrooder MODERN SPECIES 477 ptprfb (ENSHBUG00000000344) #15 larp6b (ENSHBUG00000012344) #16 ENSHBUG00000012358 #17 ranbp3b (ENSHBUG00000012404) #18 ENSHBUG00000012431 #19 ENSHBUG00000012588 #20 pnhd (ENSHBUG00000000873) #21 admp (ENSHBUG00000012701) #22 CIB3 (ENSHBUG00000001137) #23 rab8a (ENSHBUG00000012776) #24 TPM4 (ENSHBUG00000012822) ##25 ap1m1 (ENSHBUG00000012863) #26 ENSHBUG00000012883 ENSHBUG00000012949 #28 ENSHBUG00000012961 #29 DNAH8 (ENSHBUG00000013210) #30 rx2 (ENSHBUG00000013240) #31 cplx4c (ENSHBUG00000013260) #32 ATCAY (ENSHBUG00000013280) #34 nmrk2 (ENSHBUG00000013293) #35 loxl5b (ENSHBUG00000013301) #36 ENSHBUG00000013329 #37 ENSHBUG00000013344 #37 Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000169355 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000156845.v #37 ENSGT00940000164530 Haplochromini_B ANCESTRAL SPECIES 35 ENSGT00950000182900.D #7 ENSGT00390000014590 #8 ENSGT00520000060044 #9 ENSGT00390000010157.a #10 ENSGT00390000002727 #11 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00940000165636 #16 ENSGT00950000182993.A.a.j #17 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000169355 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000158992 #30 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a.c.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000156845.v #37 ENSGT00940000164530 Zebra mbuna MODERN SPECIES 1100 zgc:113691 (ENSMZEG00005024367) #9 yipf1 (ENSMZEG00005024369) #10 lrrc42 (ENSMZEG00005024370) #11 tmem59 (ENSMZEG00005024371) #12 tceanc2 (ENSMZEG00005024373) #13 CDCP2 (ENSMZEG00005024374) #14 ENSMZEG00005024375 #14 ENSMZEG00005024376 ptprfb (ENSMZEG00005024379) #15 larp6b (ENSMZEG00005024390) #16 ENSMZEG00005024393 #17 ranbp3b (ENSMZEG00005024394) #18 ENSMZEG00005024396 #19 ENSMZEG00005024398 #20 pnhd (ENSMZEG00005024401) #21 admp (ENSMZEG00005024402) #22 CIB3 (ENSMZEG00005024404) #23 rab8a (ENSMZEG00005024406) #24 TPM4 (ENSMZEG00005024409) ##25 ap1m1 (ENSMZEG00005024413) #26 ENSMZEG00005024415 ENSMZEG00005024416 #28 ENSMZEG00005024418 #29 DNAH8 (ENSMZEG00005024421) #30 rx2 (ENSMZEG00005024425) #31 cplx4c (ENSMZEG00005024427) #32 ATCAY (ENSMZEG00005024428) #34 nmrk2 (ENSMZEG00005024429) #35 loxl5b (ENSMZEG00005024431) #36 ENSMZEG00005024432 ENSMZEG00005024433 Eastern happy MODERN SPECIES 9 DCAF8 (ENSACLG00000009696) #7 ndc1 (ENSACLG00000009706) #8 zgc:113691 (ENSACLG00000009715) #9 yipf1 (ENSACLG00000009718) #10 lrrc42 (ENSACLG00000009723) #11 tmem59 (ENSACLG00000009725) #12 tceanc2 (ENSACLG00000009735) #13 CDCP2 (ENSACLG00000009740) #14 ptprfb (ENSACLG00000009769) #15 larp6b (ENSACLG00000009988) #16 ENSACLG00000010004 #17 ranbp3b (ENSACLG00000010020) #18 ENSACLG00000010434 #19 ENSACLG00000010461 #20 pnhd (ENSACLG00000010472) #21 admp (ENSACLG00000010496) #22 CIB3 (ENSACLG00000010536) #23 rab8a (ENSACLG00000010548) #24 TPM4 (ENSACLG00000010559) ##25 ap1m1 (ENSACLG00000010617) #26 ENSACLG00000010674 ENSACLG00000010693 #28 ENSACLG00000010700 #29 DNAH8 (ENSACLG00000010713) #30 rx2 (ENSACLG00000010943) #31 cplx4c (ENSACLG00000010955) #32 ATCAY (ENSACLG00000010970) #34 nmrk2 (ENSACLG00000011005) #35 loxl5b (ENSACLG00000011015) #36 ENSACLG00000011076 #37 mfsd14a2 (ENSACLG00000011223) P. nyererei MODERN SPECIES 326 DCAF8 (ENSPNYG00000006757) #7 ndc1 (ENSPNYG00000006782) #8 zgc:113691 (ENSPNYG00000006804) #9 yipf1 (ENSPNYG00000006812) #10 lrrc42 (ENSPNYG00000006826) #11 tmem59 (ENSPNYG00000006839) #12 tceanc2 (ENSPNYG00000006868) #13 CDCP2 (ENSPNYG00000006881) #14 ptprfb (ENSPNYG00000006921) #15 larp6b (ENSPNYG00000007025) #16 ENSPNYG00000007044 #17 ranbp3b (ENSPNYG00000007075) #18 ENSPNYG00000007099 #19 ENSPNYG00000007116 #20 pnhd (ENSPNYG00000007131) #21 admp (ENSPNYG00000007174) #22 CIB3 (ENSPNYG00000007193) #23 rab8a (ENSPNYG00000007220) #24 TPM4 (ENSPNYG00000007259) ##25 ap1m1 (ENSPNYG00000007319) #26 ENSPNYG00000007351 ENSPNYG00000007382 #28 ENSPNYG00000007476 #29 DNAH8 (ENSPNYG00000007506) #30 rx2 (ENSPNYG00000007700) #31 cplx4c (ENSPNYG00000007709) #32 ATCAY (ENSPNYG00000007738) #34 nmrk2 (ENSPNYG00000007759) #35 loxl5b (ENSPNYG00000007772) #36 ENSPNYG00000007844 #37 mfsd14a2 (ENSPNYG00000007987) Lyretail cichlid MODERN SPECIES 313 ndc1 (ENSNBRG00000012978) #8 zgc:113691 (ENSNBRG00000012961) #9 yipf1 (ENSNBRG00000012948) #10 lrrc42 (ENSNBRG00000012883) #11 tmem59 (ENSNBRG00000012865) #12 tceanc2 (ENSNBRG00000012854) #13 CDCP2 (ENSNBRG00000012837) #14 ENSNBRG00000012826 #14 ptprfb (ENSNBRG00000012762) #15 larp6b (ENSNBRG00000012748) #16 ENSNBRG00000012737 #17 ENSNBRG00000012721 ENSNBRG00000012715 #19 ENSNBRG00000012702 #20 pnhd (ENSNBRG00000012651) #21 admp (ENSNBRG00000012628) #22 CIB3 (ENSNBRG00000012599) #23 rab8a (ENSNBRG00000012588) #24 ENSNBRG00000012547 ##25 ap1m1 (ENSNBRG00000012502) #26 ENSNBRG00000012440 #28 ENSNBRG00000012411 #29 DNAH8 (ENSNBRG00000012073) #30 rx2 (ENSNBRG00000011995) #31 cplx4c (ENSNBRG00000011980) #32 ATCAY (ENSNBRG00000011928) #34 nmrk2 (ENSNBRG00000011899) #35 loxl5b (ENSNBRG00000011870) #36 mfsd14a2 (ENSNBRG00000011804) insra (ENSNBRG00000011734) arhgef18a (ENSNBRG00000011680) Nile tilapia MODERN SPECIES 9 DCAF8 (ENSONIG00000018547) #7 ndc1 (ENSONIG00000018548) #8 zgc:113691 (ENSONIG00000021246) #9 yipf1 (ENSONIG00000018553) #10 lrrc42 (ENSONIG00000018554) #11 tmem59 (ENSONIG00000018555) #12 tceanc2 (ENSONIG00000035739) #13 ENSONIG00000037432 #14 PTPRF (ENSONIG00000018563) #15 larp6b (ENSONIG00000036949) #16 ENSONIG00000041766 #17 ranbp3b (ENSONIG00000018570) #18 ENSONIG00000032552 #19 ENSONIG00000018573 #20 pnhd (ENSONIG00000018574) #21 admp (ENSONIG00000018575) #22 CIB3 (ENSONIG00000018576) #23 rab8a (ENSONIG00000018577) #24 TPM4 (ENSONIG00000018578) ##25 ap1m1 (ENSONIG00000018580) #26 ENSONIG00000018581 ENSONIG00000018582 #28 ENSONIG00000018588 #29 DNAH8 (ENSONIG00000018590) #30 rx2 (ENSONIG00000018592) #31 cplx4c (ENSONIG00000037812) #32 ATCAY (ENSONIG00000018595) #34 nmrk2 (ENSONIG00000018596) #35 loxl5b (ENSONIG00000018598) #36 ENSONIG00000018600 #37 mfsd14a (ENSONIG00000037562) Midas cichlid MODERN SPECIES 34 ndc1 (ENSACIG00000008518) #8 zgc:113691 (ENSACIG00000008515) #9 yipf1 (ENSACIG00000008495) #10 lrrc42 (ENSACIG00000008476) #11 tmem59 (ENSACIG00000008460) #12 tceanc2 (ENSACIG00000008447) #13 CDCP2 (ENSACIG00000008431) #14 ENSACIG00000008417 #14 ptprfb (ENSACIG00000008360) #15 ENSACIG00000008349 #16 ENSACIG00000008335 #17 ranbp3b (ENSACIG00000008243) #18 ENSACIG00000008227 #19 ENSACIG00000008210 #20 pnhd (ENSACIG00000008197) #21 admp (ENSACIG00000008180) #22 CIB3 (ENSACIG00000008163) #23 rab8a (ENSACIG00000008151) #24 ENSACIG00000008125 ##25 ap1m1 (ENSACIG00000008105) #26 ENSACIG00000008092 ENSACIG00000008077 #28 ENSACIG00000008056 #29 ENSACIG00000008035 #30 rx2 (ENSACIG00000008025) #31 cplx4c (ENSACIG00000008021) #32 ATCAY (ENSACIG00000007994) #34 nmrk2 (ENSACIG00000007974) #35 loxl5b (ENSACIG00000007956) #36 ENSACIG00000007943 ENSACIG00000007873 #37 Tiger tail seahorse MODERN SPECIES 488 DCAF8 (ENSHCOG00000000064) #7 ndc1 (ENSHCOG00000002061) #8 yipf1 (ENSHCOG00000002070) #10 lrrc42 (ENSHCOG00000002076) #11 tmem59 (ENSHCOG00000002086) #12 tceanc2 (ENSHCOG00000002119) #13 CDCP2 (ENSHCOG00000002146) #14 ptprfb (ENSHCOG00000002165) #15 ENSHCOG00000002174 #17 ranbp3b (ENSHCOG00000002201) #18 ENSHCOG00000002227 ENSHCOG00000000068 #19 ENSHCOG00000002250 ##20 ENSHCOG00000002253 #20 pnhd (ENSHCOG00000002286) #21 admp (ENSHCOG00000002301) #22 CIB3 (ENSHCOG00000002327) #23 rab8a (ENSHCOG00000002361) #24 TPM4 (ENSHCOG00000002392) ##25 ap1m1 (ENSHCOG00000002410) #26 klf2b (ENSHCOG00000002422) #27 ENSHCOG00000002432 #28 ENSHCOG00000002440 #28 ENSHCOG00000002450 #29 ENSHCOG00000002466 #30 ENSHCOG00000002479 #30 ENSHCOG00000002483 #30 rx2 (ENSHCOG00000002503) #31 ATCAY (ENSHCOG00000002527) #34 nmrk2 (ENSHCOG00000002532) #35 loxl5b (ENSHCOG00000002565) #36 Pinecone sodierfish MODERN SPECIES 8 DCAF8 (ENSMMDG00005023006) #7 ndc1 (ENSMMDG00005022954) #8 zgc:113691 (ENSMMDG00005022947) #9 yipf1 (ENSMMDG00005022946) #10 lrrc42 (ENSMMDG00005022944) #11 tmem59 (ENSMMDG00005022942) #12 tceanc2 (ENSMMDG00005022940) #13 CDCP2 (ENSMMDG00005022933) #14 ptprfb (ENSMMDG00005016190) #15 larp6b (ENSMMDG00005016012) #16 NRTN (ENSMMDG00005016011) #17 ranbp3b (ENSMMDG00005015448) #18 ENSMMDG00005015370 #19 ENSMMDG00005015328 #20 pnhd (ENSMMDG00005015325) #21 admp (ENSMMDG00005015323) #22 CIB3 (ENSMMDG00005015320) #23 rab8a (ENSMMDG00005015319) #24 TPM4 (ENSMMDG00005015251) ##25 LPL (ENSMMDG00005013663) ap1m1 (ENSMMDG00005013621) #26 klf2b (ENSMMDG00005013620) #27 ENSMMDG00005013619 #28 ENSMMDG00005013614 #29 rx2 (ENSMMDG00005013611) #31 cplx4c (ENSMMDG00005013610) #32 ATCAY (ENSMMDG00005013598) #34 nmrk2 (ENSMMDG00005013589) #35 loxl5b (ENSMMDG00005013539) #36 ENSMMDG00005013530 #37 mfsd14a2 (ENSMMDG00005013508) Cod MODERN SPECIES 21 ndc1 (ENSGMOG00000012456) #8 yipf1 (ENSGMOG00000012461) #10 lrrc42 (ENSGMOG00000012463) #11 tmem59 (ENSGMOG00000012465) #12 TCEANC2 (ENSGMOG00000012467) #13 CDCP2 (ENSGMOG00000012470) #14 ENSGMOG00000033088 ENSGMOG00000024625 ENSGMOG00000026053 ENSGMOG00000012471 #15 ENSGMOG00000034364 #17 ranbp3b (ENSGMOG00000012476) #18 ENSGMOG00000033525 #19 ENSGMOG00000023427 #20 pnhd (ENSGMOG00000012482) #21 admp (ENSGMOG00000012485) #22 CIB3 (ENSGMOG00000012487) #23 rab8a (ENSGMOG00000012489) #24 TPM4 (ENSGMOG00000012492) ##25 ENSGMOG00000012494 ap1m1 (ENSGMOG00000012498) #26 klf2b (ENSGMOG00000036462) #27 ENSGMOG00000012502 #28 ENSGMOG00000012507 #29 rx2 (ENSGMOG00000012510) #31 ENSGMOG00000032331 ENSGMOG00000012512 #34 nmrk2 (ENSGMOG00000012513) #35 loxl5b (ENSGMOG00000012514) #36 ENSGMOG00000032554 ENSGMOG00000012516 #37 Protacanthopterygii ANCESTRAL SPECIES 32 ENSGT00950000183072.a.a.b ENSGT00390000008686.c.c ENSGT00920000149157.c ENSGT00940000154992.a.a ENSGT01100000264009 ENSGT00950000182993.A.a.j #17 ENSGT00940000155060.C.a.a #15 ENSGT00940000158291 #14 ENSGT00390000014384 #13 ENSGT00390000008279.a #12 ENSGT00390000008557 ENSGT00390000002727 #11 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466.c #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157178.g ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b.c #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000156845.nc.a #37 ENSGT00940000156845.nc.b #37 ENSGT00940000164530 Salmoninae ANCESTRAL SPECIES 412 ENSGT00940000156845.nc.a.b #37 ENSGT00940000154779.a.a.c.h #36 ENSGT00940000165007.a #35 ENSGT00940000158364.a #34 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b.c.a #31 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155438.a.o #28 ENSGT00940000164495.c.a.f #27 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157246.a.f #24 ENSGT00940000160466.c #23 ENSGT00940000165287.a.a #20 ENSGT00390000005847.f #21 ENSGT00940000165063 #22 Salmoninae_a ANCESTRAL SPECIES 51 ENSGT00940000156845.nc.a.b #37 ENSGT00940000154779.a.a.c.h #36 ENSGT00940000165007.a #35 ENSGT00940000158364.a #34 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b.c.a #31 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155438.a.o #28 ENSGT00940000164495.c.a.f #27 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157246.a.f #24 ENSGT00940000160466.c #23 ENSGT00940000165287.a.a #20 ENSGT00390000005847.f #21 ENSGT00940000165063 #22 ENSGT00900000141362.a.a #19 ENSGT00940000158588.d.b.b #18 ENSGT00940000177219.d ENSGT01100000263505.b.b.a.b.a.a.b ENSGT00940000162287.A.j.c.b ENSGT00940000161979.B.o ENSGT00940000154446.b.a.a.b.a.a ENSGT00390000002727 #11 ENSGT00390000008557 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00950000182993.A.a.j #17 ENSGT00940000156466.ub Salmo ANCESTRAL SPECIES 21 ENSGT00940000156845.nc.a.b #37 ENSGT00940000154779.a.a.c.h #36 ENSGT00940000165007.a #35 ENSGT00940000158364.a #34 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b.c.a #31 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155438.a.o #28 ENSGT00940000164495.c.a.f #27 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157246.a.f #24 ENSGT00940000160466.c #23 ENSGT00940000165287.a.a #20 ENSGT00390000005847.f #21 ENSGT00940000165063 #22 ENSGT00900000141362.a.a #19 ENSGT00940000158588.d.b.b #18 ENSGT00940000168692.i.a ENSGT00940000161979.B.o ENSGT00940000154446.b.a.a.b.a.a ENSGT00390000002727 #11 ENSGT00390000008557 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00950000182993.A.a.j #17 ENSGT01080000257907 ENSGT00940000156466.ub ENSGT00940000154992.a.a Atlantic salmon MODERN SPECIES 5 ENSSSAG00000058448 #34 rx2 (ENSSSAG00000083843) #31 ENSSSAG00000089063 ENSSSAG00000058499 #29 ENSSSAG00000059374 #28 ENSSSAG00000094895 klf2b (ENSSSAG00000064886) #27 ENSSSAG00000103555 ENSSSAG00000064905 TPM4 (ENSSSAG00000064967) ##25 rab8a (ENSSSAG00000110185) #24 ENSSSAG00000086785 cib3 (ENSSSAG00000094870) #23 ENSSSAG00000065092 #20 ENSSSAG00000065104 #21 ENSSSAG00000065115 #22 ENSSSAG00000065129 #19 ENSSSAG00000065165 #18 ENSSSAG00000104508 ENSSSAG00000065230 zbt17 (ENSSSAG00000065264) ENSSSAG00000091190 ENSSSAG00000065284 lrrc42 (ENSSSAG00000005854) #11 LDLRAD1 (ENSSSAG00000112729) TMEM59 (ENSSSAG00000005868) #12 TCEANC2 (ENSSSAG00000005877) #13 CDCP2 (ENSSSAG00000005884) #14 ENSSSAG00000005891 ENSSSAG00000114776 ENSSSAG00000098414 #15 River trout MODERN SPECIES 13 ENSSTUG00000046087 ENSSTUG00000046101 #37 loxl5b (ENSSTUG00000046169) #36 nmrk2 (ENSSTUG00000046177) #35 ATCAY (ENSSTUG00000046207) #34 cplx4c (ENSSTUG00000046236) #32 rx2 (ENSSTUG00000046240) #31 ENSSTUG00000046247 #29 ENSSTUG00000046354 #28 klf2b (ENSSTUG00000047295) #27 LPL (ENSSTUG00000047301) TPM4 (ENSSTUG00000047318) ##25 rab8a (ENSSTUG00000047345) #24 CIB3 (ENSSTUG00000047349) #23 ENSSTUG00000047353 #20 admp (ENSSTUG00000047354) #22 ENSSTUG00000047357 #19 ranbp3b (ENSSTUG00000047369) #18 ENSSTUG00000023084 ENSSTUG00000023146 ENSSTUG00000023161 lrrc42 (ENSSTUG00000023167) #11 LDLRAD1 (ENSSTUG00000023187) tmem59 (ENSSTUG00000023199) #12 tceanc2 (ENSSTUG00000023219) #13 CDCP2 (ENSSTUG00000023231) #14 ENSSTUG00000023256 ENSSTUG00000023271 #17 ENSSTUG00000023274 ENSSTUG00000023282 ENSSTUG00000023298 Oncorhynchus ANCESTRAL SPECIES 46 ENSGT00940000156845.nc.a.b #37 ENSGT00940000154779.a.a.c.h #36 ENSGT00940000165007.a #35 ENSGT00940000158364.a #34 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b.c.a #31 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155438.a.o #28 ENSGT00940000164495.c.a.f #27 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157246.a.f #24 ENSGT00940000160466.c #23 ENSGT00940000165287.a.a #20 ENSGT00390000005847.f #21 ENSGT00940000165063 #22 ENSGT00900000141362.a.a #19 ENSGT00940000158588.d.b.b #18 ENSGT00940000177219.d ENSGT00940000162287.A.j.c.b ENSGT00940000161979.B.o ENSGT00940000154446.b.a.a.b.a.a ENSGT00390000002727 #11 ENSGT00390000008557 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00950000182993.A.a.j #17 ENSGT00940000156466.ub ENSGT00940000154992.a.a Rainbow trout MODERN SPECIES 29 ENSOMYG00000001977 #34 cplx4c (ENSOMYG00000002014) #32 rx2 (ENSOMYG00000002048) #31 ENSOMYG00000037630 ENSOMYG00000002199 #29 ENSOMYG00000002314 #28 klf2b (ENSOMYG00000002347) #27 ENSOMYG00000077268 TPM4 (ENSOMYG00000002709) ##25 rab8a (ENSOMYG00000002743) #24 ENSOMYG00000072305 ENSOMYG00000069911 CIB3 (ENSOMYG00000002758) #23 ENSOMYG00000002773 #20 ENSOMYG00000002796 #21 ENSOMYG00000002806 #22 ENSOMYG00000069047 #19 ENSOMYG00000002876 #18 ENSOMYG00000002994 ENSOMYG00000064336 ENSOMYG00000003028 ENSOMYG00000003038 LRRC42 (ENSOMYG00000003047) #11 LDLRAD1 (ENSOMYG00000050330) TMEM59 (ENSOMYG00000003115) #12 TCEANC2 (ENSOMYG00000003190) #13 CDCP2 (ENSOMYG00000003263) #14 ENSOMYG00000063534 ENSOMYG00000057645 ENSOMYG00000060774 #15 ENSOMYG00000003383 #17 Oncorhynchus_a ANCESTRAL SPECIES 56 ENSGT00940000156845.nc.a.b #37 ENSGT00940000154779.a.a.c.h #36 ENSGT00940000165007.a #35 ENSGT00940000158364.a #34 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000163917.a.b.c.a #31 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000155438.a.o #28 ENSGT00940000164495.c.a.f #27 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157246.a.f #24 ENSGT00940000160466.c #23 ENSGT00940000165287.a.a #20 ENSGT00390000005847.f #21 ENSGT00940000165063 #22 ENSGT00900000141362.a.a #19 ENSGT00940000158588.d.b.b #18 ENSGT00940000177219.d ENSGT00390000002727 #11 ENSGT00390000008557 ENSGT00390000008279.a #12 ENSGT00390000014384 #13 ENSGT00940000158291 #14 ENSGT00940000155060.C.a.a #15 ENSGT00950000182993.A.a.j #17 ENSGT00940000156466.ub ENSGT00940000154992.a.a ENSGT00920000149157.c ENSGT00390000008686.c.c ENSGT00950000183072.a.a.b Chinook salmon MODERN SPECIES 1 ENSOTSG00005033589 nadkb (ENSOTSG00005033595) SKIL (ENSOTSG00005033597) ENSOTSG00005033598 DAPK3 (ENSOTSG00005033599) lsm7 (ENSOTSG00005033601) sppl2 (ENSOTSG00005033602) arhgef18a (ENSOTSG00005033606) ENSOTSG00005033608 insra (ENSOTSG00005033612) tpm4b (ENSOTSG00005033626) #25 rab8a (ENSOTSG00005033728) #24 CIB3 (ENSOTSG00005033731) #23 ENSOTSG00005033732 #20 pnhd (ENSOTSG00005033733) #21 admp (ENSOTSG00005033734) #22 ENSOTSG00005033735 ranbp3b (ENSOTSG00005033736) #18 ENSOTSG00005033737 ENSOTSG00005033738 ENSOTSG00005033740 ENSOTSG00005033741 lrrc42 (ENSOTSG00005033742) #11 tmem59 (ENSOTSG00005033744) #12 tceanc2 (ENSOTSG00005033745) #13 CDCP2 (ENSOTSG00005033746) #14 ENSOTSG00005033747 ctsba (ENSOTSG00005033749) ENSOTSG00005033762 ENSOTSG00005033766 gcfc2 (ENSOTSG00005033769) Coho salmon MODERN SPECIES 23 ENSOKIG00005036135 #37 loxl5b (ENSOKIG00005036426) #36 nmrk2 (ENSOKIG00005036477) #35 ATCAY (ENSOKIG00005036502) #34 cplx4c (ENSOKIG00005036514) #32 rx2 (ENSOKIG00005036527) #31 ENSOKIG00005036578 #29 ENSOKIG00005037416 #28 klf2b (ENSOKIG00005037911) #27 LPL (ENSOKIG00005037933) ENSOKIG00005037969 ##25 rab8a (ENSOKIG00005038077) #24 CIB3 (ENSOKIG00005038110) #23 ENSOKIG00005038161 #20 ENSOKIG00005038169 #21 admp (ENSOKIG00005038193) #22 ENSOKIG00005038203 #19 RANBP3 (ENSOKIG00005038219) #18 ENSOKIG00005038254 ENSOKIG00005038281 lrrc42 (ENSOKIG00005038302) #11 LDLRAD1 (ENSOKIG00005038330) tmem59 (ENSOKIG00005038352) #12 tceanc2 (ENSOKIG00005038370) #13 CDCP2 (ENSOKIG00005038380) #14 ENSOKIG00005038387 ENSOKIG00005038391 PTPRF (ENSOKIG00005038741) #15 NRTN (ENSOKIG00005045506) #17 capsla (ENSOKIG00005045510) ENSOKIG00005045523 Huchen MODERN SPECIES 1876 TPM4 (ENSHHUG00000013592) #25 rab8a (ENSHHUG00000013566) #24 CIB3 (ENSHHUG00000013557) #23 ENSHHUG00000013548 #20 admp (ENSHHUG00000013541) #22 ENSHHUG00000013529 #19 RANBP3 (ENSHHUG00000013500) #18 ENSHHUG00000013453 ENSHHUG00000013423 ENSHHUG00000013415 lrrc42 (ENSHHUG00000013400) #11 LDLRAD1 (ENSHHUG00000013395) ENSHHUG00000013391 tmem59 (ENSHHUG00000013387) #12 tceanc2 (ENSHHUG00000013383) #13 ENSHHUG00000013380 ENSHHUG00000013377 #14 Northern pike MODERN SPECIES 2 scn12aa (ENSELUG00000015580) ENSELUG00000026502 capsla (ENSELUG00000014778) ENSELUG00000014752 #17 ptprfb (ENSELUG00000000543) #15 ENSELUG00000027575 CDCP2 (ENSELUG00000014641) #14 tceanc2 (ENSELUG00000014656) #13 tmem59 (ENSELUG00000014611) #12 lrrc42 (ENSELUG00000014595) #11 ENSELUG00000014586 ranbp3b (ENSELUG00000014572) #18 ENSELUG00000014541 #19 ENSELUG00000014506 #20 pnhd (ENSELUG00000014481) #21 admp (ENSELUG00000014468) #22 rab8a (ENSELUG00000034094) #24 CIB3 (ENSELUG00000014416) #23 ENSELUG00000014399 ##25 LPL (ENSELUG00000014351) ap1m1 (ENSELUG00000014308) #26 klf2b (ENSELUG00000014262) #27 ENSELUG00000014207 #28 ENSELUG00000014098 #29 rx2 (ENSELUG00000014048) #31 cplx4c (ENSELUG00000014015) #32 ATCAY (ENSELUG00000013996) #34 nmrk2 (ENSELUG00000013939) #35 loxl5b (ENSELUG00000013872) #36 ENSELUG00000013827 #37 mfsd14a2 (ENSELUG00000013771) Otomorpha ANCESTRAL SPECIES 5 ENSGT00390000017580 ENSGT00940000166845 ENSGT00950000182982.A.b ENSGT00940000159325 ENSGT00390000005826.b.f ENSGT00940000154456.hb.a ENSGT00940000155569.a.b ENSGT00390000007336.a.b ENSGT00950000182993.A.a.j #17 ENSGT00390000018651.a ENSGT00940000156466 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157924 #26 ENSGT00940000164495.c.a #27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000162806.b.a Otophysi ANCESTRAL SPECIES 122 ENSGT00390000017580 ENSGT00940000166845 ENSGT00950000182982.A.b ENSGT00940000159325 ENSGT00390000005826.b.f ENSGT00940000154456.hb.a ENSGT00940000155569.a.b ENSGT00390000007336.a.b ENSGT00950000182993.A.a.j #17 ENSGT00390000018651.a ENSGT00940000156466 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 Characiphysae ANCESTRAL SPECIES 20 ENSGT00940000154742.a ENSGT00390000017580 ENSGT00940000166845 ENSGT00950000182982.A.b ENSGT00940000159325 ENSGT00390000005826.b.f ENSGT00940000154456.hb.a ENSGT00940000155569.a.b ENSGT00390000007336.a.b ENSGT00950000182993.A.a.j #17 ENSGT00940000156466 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 Channel catfish MODERN SPECIES 12 ENSIPUG00000017722 ankrd12 (ENSIPUG00000017670) ndufv2 (ENSIPUG00000017607) ACSS2 (ENSIPUG00000017496) mtcl1 (ENSIPUG00000017423) rab12 (ENSIPUG00000017401) Napg (ENSIPUG00000017351) ENSIPUG00000017050 ENSIPUG00000016998 abhd8 (ENSIPUG00000016953) ENSIPUG00000016937 #17 capsla (ENSIPUG00000016920) ranbp3 (ENSIPUG00000016831) #18 ENSIPUG00000016815 #19 pnhd (ENSIPUG00000016792) #21 admp (ENSIPUG00000016781) #22 ENSIPUG00000016727 PTPRS (ENSIPUG00000016658) FEM1A (ENSIPUG00000016646) ENSIPUG00000016618 Harbi1 (ENSIPUG00000016605) ENSIPUG00000016596 ENSIPUG00000016556 PRKAB2 (ENSIPUG00000016527) ENSIPUG00000016488 piwil1 (ENSIPUG00000016443) sdhc (ENSIPUG00000016379) cadm3 (ENSIPUG00000016275) KIRREL (ENSIPUG00000016174) epc1b (ENSIPUG00000016101) arhgap12a (ENSIPUG00000016023) Characiphysae_b ANCESTRAL SPECIES 57 ENSGT00940000154742.a ENSGT00390000017580 ENSGT00940000166845 ENSGT00950000182982.A.b ENSGT00940000159325 ENSGT00390000005826.b.f ENSGT00940000154456.hb.a ENSGT00940000155569.a.b ENSGT00390000007336.a.b ENSGT00950000182993.A.a.j #17 ENSGT00940000156466 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 Characoidei ANCESTRAL SPECIES 45 ENSGT00940000154742.a ENSGT00390000017580 ENSGT00940000166845 ENSGT00950000182982.A.b ENSGT00940000159325 ENSGT00390000005826.b.f ENSGT00940000154456.hb.a.a ENSGT00940000155569.a.b ENSGT00390000007336.a.b ENSGT00950000182993.A.a.j #17 ENSGT00940000156466 ENSGT00940000158588 #18 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 Red-bellied piranha MODERN SPECIES 330 ENSPNAG00000004840 ABHD8 (ENSPNAG00000027807) ENSPNAG00000027816 #17 capsla (ENSPNAG00000027839) ranbp3b (ENSPNAG00000027857) #18 ENSPNAG00000004270 #19 ENSPNAG00000027904 #20 admp (ENSPNAG00000027948) #22 ENSPNAG00000027963 per2 (ENSPNAG00000004287) hes6 (ENSPNAG00000028022) itm2cb (ENSPNAG00000028063) lpar5a (ENSPNAG00000028071) GPR55 (ENSPNAG00000005315) gigyf2 (ENSPNAG00000004304) ENSPNAG00000028118 ACSL3 (ENSPNAG00000028151) pax3a (ENSPNAG00000004317) ENSPNAG00000006072 ENSPNAG00000006923 CCNY (ENSPNAG00000028264) ENSPNAG00000028282 ENSPNAG00000028310 Mexicana tetra MODERN SPECIES 8 ankrd12 (ENSAMXG00000043499) ndufv2 (ENSAMXG00000032899) acss2l (ENSAMXG00000011998) MTCL1 (ENSAMXG00000029826) napgb (ENSAMXG00000039216) rab12 (ENSAMXG00000004882) PIEZO2 (ENSAMXG00000001272) ENSAMXG00000001307 ABHD8 (ENSAMXG00000001323) ENSAMXG00000029455 #17 capsla (ENSAMXG00000001341) ranbp3b (ENSAMXG00000001354) #18 ENSAMXG00000034052 #19 ENSAMXG00000041723 #20 pnhd (ENSAMXG00000035228) #21 admp (ENSAMXG00000001399) #22 ENSAMXG00000001409 per2 (ENSAMXG00000001431) hes6 (ENSAMXG00000032679) itm2cb (ENSAMXG00000043807) lpar5a (ENSAMXG00000026037) GPR55 (ENSAMXG00000033084) gigyf2 (ENSAMXG00000001520) ENSAMXG00000035794 acsl3b (ENSAMXG00000001549) pax3a (ENSAMXG00000043552) ENSAMXG00000043829 ENSAMXG00000038548 ENSAMXG00000040635 ENSAMXG00000037000 ENSAMXG00000039377 Electric eel MODERN SPECIES 281 ENSEEEG00000022717 ndufv2 (ENSEEEG00000022716) acss2l (ENSEEEG00000022715) ENSEEEG00000022714 rab12 (ENSEEEG00000022711) napgb (ENSEEEG00000022709) ENSEEEG00000022700 ENSEEEG00000022696 ABHD8 (ENSEEEG00000022695) ENSEEEG00000022694 ranbp3b (ENSEEEG00000022692) #18 ENSEEEG00000022688 #19 ENSEEEG00000022687 #20 ENSEEEG00000022686 #20 pnhd (ENSEEEG00000022683) #21 admp (ENSEEEG00000022682) #22 ENSEEEG00000022681 ENSEEEG00000022678 ENSEEEG00000022674 ENSEEEG00000022672 Cyprinoidei ANCESTRAL SPECIES 69 ENSGT00950000183066.a.b.a.a ENSGT00390000007058 ENSGT00940000154742.a ENSGT00390000017580 ENSGT00940000166845 ENSGT00950000182982.A.b ENSGT00940000159325 ENSGT00390000005826.b.f ENSGT00940000154456.hb.a ENSGT00940000155569.a.b ENSGT00390000007336.a.b ENSGT00950000182993.A.a.j #17 ENSGT00900000141362.a.a #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 238 ENSGT00940000154742.a.w ENSGT00390000017580.a ENSGT00940000166845.e.a ENSGT00950000182982.A.b.u ENSGT00940000159325.a ENSGT00390000005826.b.f.a ENSGT00940000154456.hb.a.e ENSGT00940000155569.a.b ENSGT00390000007336.a.b.a ENSGT00950000182993.A.a.j.c.a #17 ENSGT00940000156466.db.a ENSGT00940000158588.j.b #18 ENSGT00900000141362.a.a.e.a #19 ENSGT01000000214896.A ENSGT00390000005847.a #21 ENSGT00940000165063.g #22 ENSGT00940000160466.a #23 ENSGT00940000157246.a.b #24 ENSGT01030000234542.b.b.a.a.a.b.wb.b.a ##25 ENSGT00940000157178.g ENSGT00940000157924.e #26 Cyprininae_a ANCESTRAL SPECIES 59 ENSGT00390000017580.a ENSGT00940000166845.e.a ENSGT00950000182982.A.b.u ENSGT00940000159325.a ENSGT00390000005826.b.f.a ENSGT00940000154456.hb.a.e ENSGT00940000155569.a.b ENSGT00390000007336.a.b.a ENSGT00950000182993.A.a.j.c.a #17 ENSGT00950000182993.A.a.j.d #17 ENSGT00940000156466.db.a ENSGT00940000158588.j.b #18 ENSGT00900000141362.a.a.e.a #19 ENSGT01000000214896.A ENSGT00390000005847.a #21 ENSGT00940000165063.g #22 ENSGT00940000160466.b #23 ENSGT00940000155363.w ENSGT00940000164495.c.a.a #27 ENSGT00940000155438.a.q #28 ENSGT00950000182915.b.b.a.b.c.b.a #29 ENSGT00940000163917.a.b.b #31 ENSGT00940000158364.a.b #34 ENSGT00940000165007.a.a #35 ENSGT00940000154779.a.a.c.b #36 ENSGT00390000015368.a.a.c.a ENSGT00940000157413.j ENSGT00940000158081.o.b.a ENSGT00940000153593.h.b.a ENSGT01030000234515.a.b.b.b.a ENSGT00940000154412.C.c.a.a Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 455 ENSSGRG00000007727 #17 capsla (ENSSGRG00000007726) ranbp3b (ENSSGRG00000007676) #18 ENSSGRG00000007670 #19 ENSSGRG00000007669 pnhd (ENSSGRG00000007668) #21 admp (ENSSGRG00000007662) #22 admp (ENSSGRG00000007661) #22 CIB3 (ENSSGRG00000007644) #23 ENSSGRG00000007642 ENSSGRG00000007137 #25 LPL (ENSSGRG00000006955) ap1m1 (ENSSGRG00000006676) #26 klf2b (ENSSGRG00000006665) #27 ENSSGRG00000006659 #28 ENSSGRG00000005235 #29 ATCAY (ENSSGRG00000005215) #34 nmrk2 (ENSSGRG00000004999) #35 jund (ENSSGRG00000004993) pgpep1 (ENSSGRG00000004992) upf1 (ENSSGRG00000004701) HOMER3 (ENSSGRG00000004689) Golden-line barbel MODERN SPECIES 455 ENSSGRG00000007727 #17 capsla (ENSSGRG00000007726) ranbp3b (ENSSGRG00000007676) #18 ENSSGRG00000007670 #19 ENSSGRG00000007669 pnhd (ENSSGRG00000007668) #21 admp (ENSSGRG00000007662) #22 admp (ENSSGRG00000007661) #22 CIB3 (ENSSGRG00000007644) #23 ENSSGRG00000007642 ENSSGRG00000007137 #25 LPL (ENSSGRG00000006955) ap1m1 (ENSSGRG00000006676) #26 klf2b (ENSSGRG00000006665) #27 ENSSGRG00000006659 #28 ENSSGRG00000005235 #29 ATCAY (ENSSGRG00000005215) #34 nmrk2 (ENSSGRG00000004999) #35 jund (ENSSGRG00000004993) pgpep1 (ENSSGRG00000004992) upf1 (ENSSGRG00000004701) HOMER3 (ENSSGRG00000004689) ENSSGRG00000004686 Goldfish MODERN SPECIES 19 ENSCARG00000023249 ndufv2 (ENSCARG00000023222) acss2l (ENSCARG00000022791) MTCL1 (ENSCARG00000022758) rab12 (ENSCARG00000022749) napgb (ENSCARG00000022710) PIEZO2 (ENSCARG00000022077) ENSCARG00000022011 ABHD8 (ENSCARG00000021995) ENSCARG00000021990 #17 capsla (ENSCARG00000021984) ranbp3b (ENSCARG00000021950) #18 ENSCARG00000021934 #19 ENSCARG00000021930 pnhd (ENSCARG00000021921) #21 admp (ENSCARG00000021903) #22 ENSCARG00000021897 CIB3 (ENSCARG00000021892) #23 rab8a (ENSCARG00000021840) #24 TPM4 (ENSCARG00000021759) ##25 LPL (ENSCARG00000021713) ap1m1 (ENSCARG00000021242) #26 klf2b (ENSCARG00000021223) #27 ENSCARG00000021214 ENSCARG00000020750 #29 rx2 (ENSCARG00000020728) #31 ATCAY (ENSCARG00000020674) #34 nmrk2 (ENSCARG00000011532) #35 ENSCARG00000011526 loxl5b (ENSCARG00000011513) #36 jund (ENSCARG00000011501) Cyprininae ANCESTRAL SPECIES 142 ENSGT00940000154742.a.x ENSGT00390000017580.b ENSGT00940000166845.e.b ENSGT00950000182982.A.b.v ENSGT00940000159325.b ENSGT00390000005826.b.f.b ENSGT00940000154456.hb.a.f ENSGT00390000007336.a.b.b ENSGT00950000182993.A.a.j.c.b #17 ENSGT00940000156466.db.b ENSGT00940000158588.j.a #18 ENSGT00900000141362.a.a.e.b #19 ENSGT00900000141362.a.a.f #19 ENSGT00940000165287.a.a #20 ENSGT00390000005847.b #21 ENSGT00940000165063.h #22 ENSGT00940000160466.b #23 ENSGT00940000155363.w ENSGT01030000234542.b.b.a.a.a.b.xb #25 ENSGT01030000234542.b.b.b ##25 Goldfish DUPLICATION Goldfish MODERN SPECIES 11 ENSCARG00000041857 ENSCARG00000041828 ENSCARG00000041823 FEM1A (ENSCARG00000041813) FEM1A (ENSCARG00000041785) fcer1gl (ENSCARG00000041767) NCSTN (ENSCARG00000041254) pnp5b (ENSCARG00000041228) jund (ENSCARG00000041219) pgpep1 (ENSCARG00000041182) upf1 (ENSCARG00000041022) ENSCARG00000040961 #29 ENSCARG00000040719 #28 ENSCARG00000040695 #20 pnhd (ENSCARG00000040685) #21 admp (ENSCARG00000040664) #22 ENSCARG00000040473 ##25 ap1m1 (ENSCARG00000040258) #26 ENSCARG00000040236 klf2b (ENSCARG00000040217) #27 ENSCARG00000040093 #28 ENSCARG00000040005 #29 rx2 (ENSCARG00000039976) #31 cplx4c (ENSCARG00000039962) #32 ATCAY (ENSCARG00000039907) #34 nmrk2 (ENSCARG00000039889) #35 loxl5b (ENSCARG00000039848) #36 Goldfish MODERN SPECIES 2813 ENSCARG00000060560 #19 ENSCARG00000060584 ENSCARG00000060631 ENSCARG00000060646 ENSCARG00000060652 #20 pnhd (ENSCARG00000060663) #21 admp (ENSCARG00000060675) #22 rab8a (ENSCARG00000060692) #24 Cyprininae_a ANCESTRAL SPECIES 162 ENSGT00390000007058.e.b ENSGT00940000154742.a.x ENSGT00390000017580.b ENSGT00940000166845.e.b ENSGT00950000182982.A.b.v ENSGT00940000159325.b ENSGT00390000005826.b.f.b ENSGT00940000154456.hb.a.f ENSGT00390000007336.a.b.b ENSGT00940000156466.db.b ENSGT00940000158588.j.a #18 ENSGT00900000141362.a.a.e.b #19 ENSGT01000000214896.B ENSGT00940000165287.a.a #20 ENSGT00390000005847.b #21 ENSGT00940000165063.h #22 ENSGT00940000160466.a #23 ENSGT00940000157246.a.a #24 ENSGT01030000234542.b.b.a.a.a.b.xb #25 ENSGT01030000234542.b.b.b ##25 ENSGT01030000234542.b.b.a.a.a.b.wb.b.a ##25 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b.b ##25 ENSGT00940000157924.f #26 ENSGT00940000164495.c.a.b #27 ENSGT00940000155438.a.r #28 ENSGT00950000182915.b.b.a.b.c.b.b #29 ENSGT00940000163917.a.b.a #31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000158364.a.a #34 ENSGT00940000165007.a.b #35 Common carp reference DUPLICATION Common carp reference MODERN SPECIES 21 ankrd12 (ENSCCRG00000008581) ndufv2 (ENSCCRG00000069342) acss2l (ENSCCRG00000080986) MTCL1 (ENSCCRG00000063869) rab12 (ENSCCRG00000035454) napgb (ENSCCRG00000035431) ENSCCRG00000021449 ENSCCRG00000014093 ENSCCRG00000069483 #17 ENSCCRG00000014088 ranbp3b (ENSCCRG00000015662) #18 ENSCCRG00000068957 #19 ENSCCRG00000015682 ENSCCRG00000053089 #20 pnhd (ENSCCRG00000015688) #21 admp (ENSCCRG00000079125) #22 ENSCCRG00000074681 #24 ap1m1 (ENSCCRG00000049217) #26 ENSCCRG00000016932 ##25 klf2b (ENSCCRG00000011217) #27 ENSCCRG00000081626 #28 ENSCCRG00000019801 #29 rx2 (ENSCCRG00000075008) #31 cplx4c (ENSCCRG00000079094) #32 ENSCCRG00000045180 #34 nmrk2 (ENSCCRG00000045258) #35 loxl5b (ENSCCRG00000045132) #36 jund (ENSCCRG00000035101) pgpep1 (ENSCCRG00000073516) upf1 (ENSCCRG00000051892) ENSCCRG00000058571 Common carp reference MODERN SPECIES 29 ndufv2 (ENSCCRG00000008598) acss2l (ENSCCRG00000077477) MTCL1 (ENSCCRG00000064731) rab12 (ENSCCRG00000001866) napgb (ENSCCRG00000001797) ENSCCRG00000000858 ENSCCRG00000010057 ENSCCRG00000010079 ENSCCRG00000014085 #17 capsla (ENSCCRG00000009956) ranbp3b (ENSCCRG00000009959) #18 ENSCCRG00000027011 #19 ENSCCRG00000037946 ENSCCRG00000030635 pnhd (ENSCCRG00000030625) #21 admp (ENSCCRG00000030620) #22 ENSCCRG00000052584 #23 ENSCCRG00000076191 ##25 ENSCCRG00000007837 ENSCCRG00000049877 #26 klf2b (ENSCCRG00000006413) #27 ENSCCRG00000053619 #28 ENSCCRG00000076172 #29 rx2 (ENSCCRG00000007794) #31 ENSCCRG00000051906 #34 nmrk2 (ENSCCRG00000051935) #35 loxl5b (ENSCCRG00000074189) #36 pgpep1 (ENSCCRG00000007790) upf1 (ENSCCRG00000007785) ENSCCRG00000007775 uba52 (ENSCCRG00000007704) Golden-line barbel MODERN SPECIES 215 twsg1a (ENSSGRG00000038705) ankrd12 (ENSSGRG00000038732) ndufv2 (ENSSGRG00000038996) acss2l (ENSSGRG00000039237) MTCL1 (ENSSGRG00000039413) rab12 (ENSSGRG00000039414) napgb (ENSSGRG00000039419) ENSSGRG00000039956 ENSSGRG00000039961 ABHD8 (ENSSGRG00000039962) capsla (ENSSGRG00000039964) ranbp3b (ENSSGRG00000039967) #18 ENSSGRG00000039969 #19 ENSSGRG00000039973 #20 pnhd (ENSSGRG00000039977) #21 admp (ENSSGRG00000039978) #22 CIB3 (ENSSGRG00000039980) #23 rab8a (ENSSGRG00000039981) #24 ENSSGRG00000039982 #25 ENSSGRG00000039983 ##25 LPL (ENSSGRG00000039985) AP1M1 (ENSSGRG00000040228) #26 klf2b (ENSSGRG00000040298) #27 ENSSGRG00000040301 #28 ENSSGRG00000040310 #29 cplx4c (ENSSGRG00000041707) #32 ATCAY (ENSSGRG00000041709) #34 ENSSGRG00000041711 #34 nmrk2 (ENSSGRG00000041715) #35 loxl5b (ENSSGRG00000041775) #36 jund (ENSSGRG00000041777) Zebrafish MODERN SPECIES 11 acss2l (ENSDARG00000069029) ENSDARG00000091408 rab12 (ENSDARG00000089428) napgb (ENSDARG00000043012) ENSDARG00000112723 PIEZO2 (ENSDARG00000107086) ENSDARG00000099376 ABHD8 (ENSDARG00000103518) ENSDARG00000110877 #17 capsla (ENSDARG00000103521) ENSDARG00000111796 ctnnbl1 (ENSDARG00000011958) ranbp3b (ENSDARG00000069056) #18 ENSDARG00000115610 #19 pnhd (ENSDARG00000039070) #21 admp (ENSDARG00000025372) #22 ENSDARG00000110341 ENSDARG00000090727 zgc:165603 (ENSDARG00000098702) ENSDARG00000070661 sirt6 (ENSDARG00000102963) ENSDARG00000090903 ralbp1 (ENSDARG00000078653) ENSDARG00000115832 gna11b (ENSDARG00000053326) chico (ENSDARG00000019588) tle2c (ENSDARG00000067832) PLPP2 (ENSDARG00000002231) theg (ENSDARG00000078644) shda (ENSDARG00000094243) yju2 (ENSDARG00000026185) Clupeiformes ANCESTRAL SPECIES 65 ENSGT00390000018395 ENSGT00500000045074 ENSGT00390000005235 ENSGT00720000108823 ENSGT00940000164500.a ENSGT00950000183103.d.b.a.a ENSGT01030000234539.a.a.a.e ENSGT00390000005826.b.f ENSGT00940000154456.hb.a ENSGT00940000155569.a.b ENSGT00390000007336.a.b ENSGT00950000182993.A.a.j #17 ENSGT00900000141362.a.a #19 ENSGT00940000165287.b ##20 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##25 ENSGT00940000157178.g ENSGT00940000157924 #26 ENSGT00940000164495.d ##27 ENSGT00940000155438.a #28 ENSGT00950000182915.b.b.a.b.c.b #29 ENSGT00940000163917.a.b #31 ENSGT00940000158364.a #34 ENSGT00940000165007.a #35 ENSGT00940000154779.a.a.c #36 ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.l Denticle herring MODERN SPECIES 14 ENSDCDG00000020420 ENSDCDG00000020417 ENSDCDG00000020388 plekhj1 (ENSDCDG00000020384) sf3a2 (ENSDCDG00000020380) ENSDCDG00000020371 ENSDCDG00000020367 pias4b (ENSDCDG00000020322) napgb (ENSDCDG00000020227) ABHD8 (ENSDCDG00000020163) NRTN (ENSDCDG00000020156) #17 ranbp3b (ENSDCDG00000019990) #18 ENSDCDG00000019959 #19 ENSDCDG00000019953 ##20 pnhd (ENSDCDG00000019951) #21 admp (ENSDCDG00000019949) #22 CIB3 (ENSDCDG00000019945) #23 rab8a (ENSDCDG00000019941) #24 TPM4 (ENSDCDG00000019757) ##25 LPL (ENSDCDG00000019746) ap1m1 (ENSDCDG00000019589) #26 ENSDCDG00000019569 ##27 ENSDCDG00000018959 #28 ENSDCDG00000018941 #29 rx2 (ENSDCDG00000018940) #31 ATCAY (ENSDCDG00000018937) #34 cplx4c (ENSDCDG00000018929) #32 nmrk2 (ENSDCDG00000018931) #35 loxl5b (ENSDCDG00000018906) #36 jund (ENSDCDG00000018897) pgpep1 (ENSDCDG00000018895) Osteoglossiformes ANCESTRAL SPECIES 243 ENSGT00950000182904.a.b.b.a ENSGT00940000166235 ENSGT00940000165052.f ENSGT00940000160748.b ENSGT00390000006166.a ENSGT00530000063553.b.a ENSGT00940000165636 #16 ENSGT00390000012434 ENSGT00950000182993.A.a.j.a #17 ENSGT00940000158588.a #18 ENSGT00900000141362.a.a.a #19 ENSGT00940000165287.b ##20 ENSGT00940000165287.a.a #20 ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000160466 #23 ENSGT00940000157246.a #24 ENSGT01030000234542.b.b.a.a.a.b.xb #25 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##25 ENSGT00940000157178.g ENSGT00940000166556.f P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 4 plvapb (ENSPKIG00000008672) gtpbp3 (ENSPKIG00000008711) ANO8 (ENSPKIG00000008807) dda1 (ENSPKIG00000008923) ABHD8 (ENSPKIG00000008969) zgc:85936 (ENSPKIG00000009027) lmnb2 (ENSPKIG00000009052) rpl36 (ENSPKIG00000009092) VMAC (ENSPKIG00000009107) ENSPKIG00000009134 #17 RANBP3 (ENSPKIG00000009164) #18 ctns (ENSPKIG00000009205) ENSPKIG00000009232 ##19 ENSPKIG00000009244 ##20 ccl44 (ENSPKIG00000009259) admp (ENSPKIG00000009274) #22 slc1a6 (ENSPKIG00000009362) tax1bp3 (ENSPKIG00000009527) hsh2d (ENSPKIG00000009561) RAB8A (ENSPKIG00000009603) ##24 ENSPKIG00000009649 ENSPKIG00000009682 #25 lpl (ENSPKIG00000009745) ENSPKIG00000009774 ENSPKIG00000009828 safb (ENSPKIG00000009902) malt2 (ENSPKIG00000009958) mrpl54 (ENSPKIG00000009984) fam32a (ENSPKIG00000009996) ap1m1 (ENSPKIG00000010048) #26 ENSPKIG00000010130 #27 P. kingsleyae MODERN SPECIES 17 ENSPKIG00000025597 ENSPKIG00000025644 nr2f6a (ENSPKIG00000025673) ENSPKIG00000025671 dda1 (ENSPKIG00000025602) ABHD8 (ENSPKIG00000025627) LONP1 (ENSPKIG00000025624) larp6b (ENSPKIG00000025605) #16 ndufa11 (ENSPKIG00000025615) NRTN (ENSPKIG00000025612) #17 ranbp3b (ENSPKIG00000025677) #18 ENSPKIG00000000017 #19 ENSPKIG00000000030 ##20 pole4 (ENSPKIG00000000035) pnhd (ENSPKIG00000000043) #21 admp (ENSPKIG00000000061) #22 CIB3 (ENSPKIG00000000074) #23 ENSPKIG00000000101 ENSPKIG00000000130 ##25 LPL (ENSPKIG00000000174) ENSPKIG00000000228 ENSPKIG00000000256 ENSPKIG00000000275 ENSPKIG00000000340 ##27 ENSPKIG00000000357 ##28 ENSPKIG00000000371 #29 cherp (ENSPKIG00000000423) ENSPKIG00000000493 ##31 cplx4c (ENSPKIG00000000506) #32 ZFR2 (ENSPKIG00000000524) ATCAY (ENSPKIG00000000549) #34 Spotted gar MODERN SPECIES 657 ENSLOCG00000003571 lpl (ENSLOCG00000003542) tpm4a (ENSLOCG00000003523) #25 ENSLOCG00000003507 RAB8A (ENSLOCG00000003485) ##24 ENSLOCG00000003473 CIB3 (ENSLOCG00000003454) #23 tax1bp3 (ENSLOCG00000003428) ctns (ENSLOCG00000003402) ENSLOCG00000003388 ccl25b (ENSLOCG00000003372) #19 ENSLOCG00000003359 #20 pole4 (ENSLOCG00000003351) ccl44 (ENSLOCG00000003335) pnhd (ENSLOCG00000003323) #21 admp (ENSLOCG00000003305) #22 ENSLOCG00000003295 slc1a6 (ENSLOCG00000003270) ranbp3b (ENSLOCG00000003225) #18 capsla (ENSLOCG00000003203) NRTN (ENSLOCG00000003179) #17 ndufa11 (ENSLOCG00000003164) VMAC (ENSLOCG00000003155) ENSLOCG00000003145 LONP1 (ENSLOCG00000003119) rpl36 (ENSLOCG00000003106) lmnb2 (ENSLOCG00000003086) plvapa (ENSLOCG00000003074) gtpbp3 (ENSLOCG00000003052) ANO8 (ENSLOCG00000003024) dda1 (ENSLOCG00000003013) Reedfish MODERN SPECIES 3 ENSECRG00000021258 #29 rad23ab (ENSECRG00000021283) EPS15L1 (ENSECRG00000021345) ##28 klf2a (ENSECRG00000021488) #27 ap1m1 (ENSECRG00000021503) #26 ccl44 (ENSECRG00000014482) ENSECRG00000014532 pole4 (ENSECRG00000014612) ENSECRG00000014645 #20 ccl25b (ENSECRG00000014676) #19 ctns (ENSECRG00000014701) tax1bp3 (ENSECRG00000014737) CIB3 (ENSECRG00000014773) #23 ENSECRG00000014830 pnhd (ENSECRG00000014877) #21 admp (ENSECRG00000014998) #22 slc1a6 (ENSECRG00000015164) ENSECRG00000015380 ENSECRG00000015404 ENSECRG00000015447 ENSECRG00000015465 #20 ENSECRG00000015555 ranbp3b (ENSECRG00000015711) #18 capsla (ENSECRG00000015758) NRTN (ENSECRG00000015781) #17 ENSECRG00000015799 ENSECRG00000015822 VMAC (ENSECRG00000015842) ENSECRG00000015854 LONP1 (ENSECRG00000015907) rpl36 (ENSECRG00000016039) Sarcopterygii ANCESTRAL SPECIES 782 ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 Tetrapoda ANCESTRAL SPECIES 350 ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 Amniota ANCESTRAL SPECIES 63 ENSGT00940000161659 ENSGT00940000163126 ENSGT00940000159478 ENSGT00940000161178 ENSGT00910000144227.t ENSGT00960000190059 ENSGT00910000144227.s.a ENSGT00390000006553 ENSGT00990000211583 ENSGT00940000166621 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 Sauria ANCESTRAL SPECIES 50 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00910000144227.s.a ENSGT00960000190059 ENSGT00910000144227.s.b ENSGT00990000211583 ENSGT00390000006553 ENSGT00910000144227.t ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b Archelosauria ANCESTRAL SPECIES 20 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000163715.b Archosauria ANCESTRAL SPECIES 16 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000163715.b Aves ANCESTRAL SPECIES 20 ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT01030000234515.a.b.b.d African ostrich MODERN SPECIES 436 ENSSCUG00000010108 TBXA2R (ENSSCUG00000010109) ENSSCUG00000010110 PIP5K1C (ENSSCUG00000010111) TJP3 (ENSSCUG00000010113) APBA3 (ENSSCUG00000010114) ENSSCUG00000010115 ENSSCUG00000010116 ##31 ENSSCUG00000010117 #32 MATK (ENSSCUG00000010118) ELAVL1 (ENSSCUG00000010120) ENSSCUG00000010121 ENSSCUG00000010122 ENSSCUG00000010123 ENSSCUG00000010124 #21 ENSSCUG00000010125 #22 ENSSCUG00000010126 NDUFA7 (ENSSCUG00000010127) ENSSCUG00000010128 ANGPTL4 (ENSSCUG00000010129) ENSSCUG00000010130 Neognathae ANCESTRAL SPECIES 21 ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 ENSGT00940000158588 #18 Neognathae_b ANCESTRAL SPECIES 22 ENSGT01030000234559.a.a.a ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 ENSGT00940000158588 #18 ENSGT00940000159972 Neognathae_c ANCESTRAL SPECIES 24 ENSGT01030000234559.a.a.a ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00960000189460 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000158668.c.i.a.b ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 ENSGT00940000158588 #18 ENSGT00940000159972 Golden eagle MODERN SPECIES 3 HMG20B (ENSACCG00020012330) ENSACCG00020012353 TBXA2R (ENSACCG00020012364) PIP5K1C (ENSACCG00020012477) TJP3 (ENSACCG00020012618) APBA3 (ENSACCG00020012658) MRPL54 (ENSACCG00020012687) ENSACCG00020012709 ENSACCG00020012751 ##31 ENSACCG00020012764 MATK (ENSACCG00020013164) ELAVL1 (ENSACCG00020013295) ENSACCG00020013372 ENSACCG00020013437 POLE4 (ENSACCG00020013458) ENSACCG00020013477 #22 ENSACCG00020013490 ENSACCG00020013504 NDUFA7 (ENSACCG00020013539) ENSACCG00020013557 KANK3 (ENSACCG00020013573) ANGPTL4 (ENSACCG00020013595) ENSACCG00020013612 MARCHF2 (ENSACCG00020013627) ENSACCG00020013656 ENSACCG00020013668 ENSACCG00020013683 NDUFA11 (ENSACCG00020013705) RANBP3 (ENSACCG00020013758) #18 SLC1A6 (ENSACCG00020013794) LONP1 (ENSACCG00020013830) Kakapo MODERN SPECIES 13 PIP5K1C (ENSSHBG00005013262) TJP3 (ENSSHBG00005013238) APBA3 (ENSSHBG00005013079) ENSSHBG00005013048 ENSSHBG00005013012 ENSSHBG00005012995 ENSSHBG00005012973 ENSSHBG00005012944 ##31 ENSSHBG00005012929 MATK (ENSSHBG00005012904) ELAVL1 (ENSSHBG00005012884) ENSSHBG00005012824 ENSSHBG00005012800 ENSSHBG00005012752 POLE4 (ENSSHBG00005012734) ENSSHBG00005012716 #22 ENSSHBG00005012697 ENSSHBG00005012690 RPS28 (ENSSHBG00005012680) NDUFA7 (ENSSHBG00005012663) KANK3 (ENSSHBG00005012647) ANGPTL4 (ENSSHBG00005012634) ENSSHBG00005012623 MARCHF2 (ENSSHBG00005012619) ENSSHBG00005012609 ENSSHBG00005012604 ENSSHBG00005012597 NDUFA11 (ENSSHBG00005012592) RANBP3 (ENSSHBG00005012581) #18 SLC1A6 (ENSSHBG00005012557) LONP1 (ENSSHBG00005012536) Passeriformes ANCESTRAL SPECIES 27 ENSGT00390000003420.b ENSGT01030000234559.a.a.a ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00910000144227.s.a ENSGT00390000006553 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000158668.c.i.a.b ENSGT01030000234515.a.b.b.c ENSGT00940000155273.lb.a ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 Great tit MODERN SPECIES 21 GIPC3 (ENSPMJG00000004693) TBXA2R (ENSPMJG00000004691) ENSPMJG00000004684 PIP5K1C (ENSPMJG00000004656) TJP3 (ENSPMJG00000004633) APBA3 (ENSPMJG00000004626) MRPL54 (ENSPMJG00000004616) ENSPMJG00000004606 ENSPMJG00000004597 ##31 ENSPMJG00000004591 MATK (ENSPMJG00000004576) ELAVL1 (ENSPMJG00000004561) ENSPMJG00000004552 ENSPMJG00000004531 POLE4 (ENSPMJG00000004528) ENSPMJG00000004514 #22 ENSPMJG00000004507 RPS28 (ENSPMJG00000004504) ENSPMJG00000004478 NDUFA7 (ENSPMJG00000004474) KANK3 (ENSPMJG00000004465) ANGPTL4 (ENSPMJG00000004451) ENSPMJG00000004446 MARCHF2 (ENSPMJG00000004429) ENSPMJG00000004426 ENSPMJG00000004414 ENSPMJG00000004413 ENSPMJG00000004411 ENSPMJG00000004407 SPPL2B (ENSPMJG00000004404) TMPRSS9 (ENSPMJG00000004393) Passeriformes_d ANCESTRAL SPECIES 28 ENSGT00390000003420.b ENSGT01030000234559.a.a.a ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000158668.c.i.a.b ENSGT01030000234515.a.b.b.c ENSGT00940000155273.lb.a ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 ENSGT00940000160274 Passeriformes_g ANCESTRAL SPECIES 29 ENSGT00390000003420.b ENSGT01030000234559.a.a.a ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000158668.c.i.a.b ENSGT01030000234515.a.b.b.c ENSGT00940000155273.lb.a ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 ENSGT00940000160274 Medium ground finch MODERN SPECIES 144 HMG20B (ENSGFOG00000011992) GIPC3 (ENSGFOG00000011999) TBXA2R (ENSGFOG00000012003) ENSGFOG00000012009 PIP5K1C (ENSGFOG00000012030) TJP3 (ENSGFOG00000012394) APBA3 (ENSGFOG00000012404) MRPL54 (ENSGFOG00000012408) ENSGFOG00000012410 ENSGFOG00000012415 ##31 MATK (ENSGFOG00000012418) ELAVL1 (ENSGFOG00000012421) ENSGFOG00000012426 ENSGFOG00000012450 ENSGFOG00000012457 ENSGFOG00000012463 #22 ENSGFOG00000012467 KANK3 (ENSGFOG00000012473) ANGPTL4 (ENSGFOG00000012478) ENSGFOG00000012483 MARCHF2 (ENSGFOG00000012488) ENSGFOG00000012490 ENSGFOG00000012491 CERS4 (ENSGFOG00000012494) ENSGFOG00000012495 ENSGFOG00000012497 SPPL2B (ENSGFOG00000012498) TMPRSS9 (ENSGFOG00000012505) LMNB2 (ENSGFOG00000012515) RPL36 (ENSGFOG00000012523) LONP1 (ENSGFOG00000012543) Passeroidea ANCESTRAL SPECIES 29 ENSGT00390000003420.b ENSGT01030000234559.a.a.a ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000158668.c.i.a.b ENSGT01030000234515.a.b.b.c ENSGT00940000155273.lb.a ENSGT00940000155273.lb.b ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 Common canary MODERN SPECIES 44 ENSSCAG00000001232 TBXA2R (ENSSCAG00000001225) ENSSCAG00000001185 PIP5K1C (ENSSCAG00000001122) TJP3 (ENSSCAG00000001080) APBA3 (ENSSCAG00000001052) MRPL54 (ENSSCAG00000001032) ENSSCAG00000001022 ENSSCAG00000001011 ##31 ENSSCAG00000000989 #32 MATK (ENSSCAG00000000977) ELAVL1 (ENSSCAG00000000962) ENSSCAG00000000890 ENSSCAG00000000860 ENSSCAG00000000847 ENSSCAG00000000842 #22 ENSSCAG00000000837 NDUFA7 (ENSSCAG00000000829) KANK3 (ENSSCAG00000000806) ANGPTL4 (ENSSCAG00000000791) ENSSCAG00000000780 MARCHF2 (ENSSCAG00000000774) ENSSCAG00000000768 CERS4 (ENSSCAG00000000761) ENSSCAG00000000751 ENSSCAG00000000746 LSM7 (ENSSCAG00000000739) SPPL2B (ENSSCAG00000000726) ENSSCAG00000000706 ENSSCAG00000000694 ENSSCAG00000000685 Zebra finch MODERN SPECIES 21 ENSTGUG00000000168 TBXA2R (ENSTGUG00000000167) ENSTGUG00000000163 PIP5K1C (ENSTGUG00000000155) TJP3 (ENSTGUG00000000147) APBA3 (ENSTGUG00000000142) MRPL54 (ENSTGUG00000028379) ENSTGUG00000000138 RAX2 (ENSTGUG00000000137) ##31 ENSTGUG00000023054 #32 MATK (ENSTGUG00000000123) ELAVL1 (ENSTGUG00000000118) ENSTGUG00000000105 ENSTGUG00000019237 POLE4 (ENSTGUG00000000102) ENSTGUG00000020421 #22 ENSTGUG00000000100 ENSTGUG00000000098 NDUFA7 (ENSTGUG00000018969) KANK3 (ENSTGUG00000000089) ANGPTL4 (ENSTGUG00000000086) ENSTGUG00000029625 MARCHF2 (ENSTGUG00000000080) ENSTGUG00000000070 ENSTGUG00000000068 ENSTGUG00000025887 SPPL2B (ENSTGUG00000000063) TMPRSS9 (ENSTGUG00000000057) TIMM13 (ENSTGUG00000020964) LMNB2 (ENSTGUG00000000051) ENSTGUG00000022738 Flycatcher MODERN SPECIES 20 HMG20B (ENSFALG00000025880) ENSFALG00000023251 TBXA2R (ENSFALG00000011627) ENSFALG00000011629 PIP5K1C (ENSFALG00000011633) TJP3 (ENSFALG00000011640) ENSFALG00000025032 ENSFALG00000023616 ENSFALG00000011704 ##31 ENSFALG00000011714 #32 MATK (ENSFALG00000011720) ENSFALG00000011725 ENSFALG00000011740 ENSFALG00000023088 ENSFALG00000023564 ENSFALG00000011771 #22 ENSFALG00000011787 NDUFA7 (ENSFALG00000011794) KANK3 (ENSFALG00000011816) ENSFALG00000027521 ANGPTL4 (ENSFALG00000011805) ENSFALG00000011828 MARCHF2 (ENSFALG00000011843) ENSFALG00000025676 ENSFALG00000011870 ENSFALG00000011904 LSM7 (ENSFALG00000011912) SPPL2B (ENSFALG00000011932) TMPRSS9 (ENSFALG00000011951) TIMM13 (ENSFALG00000011956) LMNB2 (ENSFALG00000011960) Galloanserae ANCESTRAL SPECIES 20 ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 ENSGT00940000158588 #18 Phasianidae DUPLICATION Phasianidae ANCESTRAL SPECIES ENSGT00940000165063.a #22 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000165063.a #22 Turkey MODERN SPECIES 23 MFSD12 (ENSMGAG00000001371) HMG20B (ENSMGAG00000001362) GIPC3 (ENSMGAG00000018477) TBXA2R (ENSMGAG00000015732) ENSMGAG00000001353 PIP5K1C (ENSMGAG00000001308) TJP3 (ENSMGAG00000000963) APBA3 (ENSMGAG00000000958) ENSMGAG00000000932 ENSMGAG00000000927 ##31 ENSMGAG00000017507 ENSMGAG00000021609 #32 MATK (ENSMGAG00000000903) ENSMGAG00000001015 ENSMGAG00000001030 ENSMGAG00000007590 #22 ENSMGAG00000017295 ENSMGAG00000020045 ENSMGAG00000007623 ENSMGAG00000018454 ENSMGAG00000006435 ENSMGAG00000000832 MARCHF2 (ENSMGAG00000000837) ENSMGAG00000000846 ENSMGAG00000000850 ENSMGAG00000019659 ENSMGAG00000000852 ENSMGAG00000000877 #18 ENSMGAG00000000763 ENSMGAG00000000808 ENSMGAG00000022044 Phasianidae ANCESTRAL SPECIES 19 ENSGT01030000234559.a.a.a ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063.b #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000158668.c.i.a.b ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 Japanese quail MODERN SPECIES 20 HMG20B (ENSCJPG00005006172) GIPC3 (ENSCJPG00005006171) TBXA2R (ENSCJPG00005006170) ENSCJPG00005006165 TJP3 (ENSCJPG00005006163) ENSCJPG00005006161 ENSCJPG00005006160 ENSCJPG00005006159 ENSCJPG00005006158 ##31 ENSCJPG00005006157 MATK (ENSCJPG00005006156) ELAVL1 (ENSCJPG00005006154) ENSCJPG00005006153 ENSCJPG00005006148 POLE4 (ENSCJPG00005006146) ENSCJPG00005006142 #22 ENSCJPG00005006140 ENSCJPG00005006139 NDUFA7 (ENSCJPG00005006133) RPS28 (ENSCJPG00005006130) ENSCJPG00005006129 ANGPTL4 (ENSCJPG00005006125) ENSCJPG00005006123 MARCHF2 (ENSCJPG00005006121) ENSCJPG00005006119 ENSCJPG00005006114 ENSCJPG00005006111 ENSCJPG00005006106 ENSCJPG00005006105 RANBP3 (ENSCJPG00005006096) #18 SLC1A6 (ENSCJPG00005006091) Phasianidae_b ANCESTRAL SPECIES 20 ENSGT01030000234559.a.a.a ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00950000182938.b.b.b.b.b.a #32 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063.b #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000158668.c.i.a.b ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00390000012434 ENSGT00940000159238.a ENSGT00940000163073.e ENSGT00940000158588 #18 ENSGT00940000159972 Turkey MODERN SPECIES 491 ENSMGAG00000018178 #22 Chicken MODERN SPECIES 20 ENSGALG00010028117 ENSGALG00010028115 PIP5K1C (ENSGALG00010028113) TJP3 (ENSGALG00010028109) APBA3 (ENSGALG00010028103) MRPL54 (ENSGALG00010028101) PCASP2 (ENSGALG00010028099) RAX2 (ENSGALG00010028092) ##31 ENSGALG00010028090 ENSGALG00010028089 #32 MATK (ENSGALG00010028086) ELAVL1 (ENSGALG00010028083) ENSGALG00010028077 ENSGALG00010028074 POLE4 (ENSGALG00010028068) ADMP (ENSGALG00010028497) #22 ENSGALG00010028481 CD320 (ENSGALG00010028482) RPS28 (ENSGALG00010028463) KANK3 (ENSGALG00010028457) ANGPTL4 (ENSGALG00010027751) RAB11B (ENSGALG00010027741) MARCHF2 (ENSGALG00010027740) ENSGALG00010027738 BTN1A1 (ENSGALG00010027725) ENSGALG00010027718 ENSGALG00010027713 ENSGALG00010027710 ENSGALG00010027708 RANBP3 (ENSGALG00010027668) #18 SLC1A6 (ENSGALG00010027636) Anatidae ANCESTRAL SPECIES 57 ENSGT01030000234559.a.a.a ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00940000160775 ENSGT00960000189460 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000153527.d.rb ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 ENSGT00940000158588 #18 ENSGT00940000159972 ENSGT00530000063553.b.a Pink-footed goose MODERN SPECIES 273 TBXA2R (ENSABRG00000004389) ENSABRG00000004393 PIP5K1C (ENSABRG00000004479) TJP3 (ENSABRG00000005619) APBA3 (ENSABRG00000005634) MRPL54 (ENSABRG00000005647) ENSABRG00000005669 ENSABRG00000005702 ##31 MATK (ENSABRG00000005710) ENSABRG00000005747 ELAVL1 (ENSABRG00000005780) ENSABRG00000005795 ENSABRG00000005811 POLE4 (ENSABRG00000005824) ENSABRG00000005829 #21 ENSABRG00000005834 #22 ENSABRG00000005838 ENSABRG00000005842 ENSABRG00000005848 ENSABRG00000005851 NDUFA7 (ENSABRG00000005861) RPS28 (ENSABRG00000005883) KANK3 (ENSABRG00000005888) ANGPTL4 (ENSABRG00000005894) ENSABRG00000005901 MARCHF2 (ENSABRG00000005907) ENSABRG00000005911 ENSABRG00000005914 ENSABRG00000005917 ENSABRG00000005926 ENSABRG00000005931 Duck MODERN SPECIES 20 PIP5K1C (ENSAPLG00000005085) TCF3 (ENSAPLG00000001939) UQCR11 (ENSAPLG00000000981) ENSAPLG00000003384 FZR1 (ENSAPLG00000005845) ENSAPLG00000005461 ENSAPLG00000026833 ENSAPLG00000017442 ##31 MATK (ENSAPLG00000003263) ENSAPLG00000025013 ELAVL1 (ENSAPLG00000003139) ENSAPLG00000002793 ENSAPLG00000027829 POLE4 (ENSAPLG00000028021) ENSAPLG00000011711 #21 ENSAPLG00000017048 #22 ENSAPLG00000011387 ENSAPLG00000000921 NDUFA7 (ENSAPLG00000011378) RPS28 (ENSAPLG00000000915) ENSAPLG00000011046 MARCHF2 (ENSAPLG00000010859) ENSAPLG00000009418 ENSAPLG00000025050 ENSAPLG00000024808 ENSAPLG00000009942 NDUFA11 (ENSAPLG00000010040) RANBP3 (ENSAPLG00000010044) #18 SLC1A6 (ENSAPLG00000010390) LONP1 (ENSAPLG00000010693) RPL36 (ENSAPLG00000018797) Australian saltwater crocodile MODERN SPECIES 62 TBXA2R (ENSCPRG00005012195) ENSCPRG00005012199 PIP5K1C (ENSCPRG00005012281) TJP3 (ENSCPRG00005012534) APBA3 (ENSCPRG00005012719) MRPL54 (ENSCPRG00005012722) ENSCPRG00005012729 ENSCPRG00005012742 ##31 ENSCPRG00005012745 #32 MATK (ENSCPRG00005012763) ZFR2 (ENSCPRG00005012851) ELAVL1 (ENSCPRG00005012995) ENSCPRG00005013005 POLE4 (ENSCPRG00005013023) ENSCPRG00005013024 #21 ENSCPRG00005013027 #22 ENSCPRG00005013029 ENSCPRG00005013031 NDUFA7 (ENSCPRG00005013033) ENSCPRG00005013036 ENSCPRG00005013042 ENSCPRG00005013044 ANGPTL4 (ENSCPRG00005013045) ENSCPRG00005013048 RNASE4 (ENSCPRG00005013052) ENSCPRG00005013055 PIP4P1 (ENSCPRG00005013059) APEX1 (ENSCPRG00005013064) OSGEP (ENSCPRG00005013077) ENSCPRG00005013163 ENSCPRG00005013185 Cryptodira ANCESTRAL SPECIES 19 ENSGT01030000234559.a.a.a ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.c ENSGT01030000234515.a.b.b.c.d ENSGT00940000163715.b Testudinoidea ANCESTRAL SPECIES 39 ENSGT01030000234559.a.a.a ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553.i ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.c ENSGT01030000234515.a.b.b.c.d ENSGT00940000163715.b Emydidae ANCESTRAL SPECIES 14 ENSGT01030000234559.a.a.a ENSGT00520000060565 ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT01060000249141 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00530000066804 ENSGT00390000006553.i ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.c ENSGT01030000234515.a.b.b.c.d ENSGT00940000163715.b Three-toed box turtle MODERN SPECIES 323 ENSTMTG00000018784 #21 ENSTMTG00000018804 #22 ENSTMTG00000018819 ENSTMTG00000018828 NDUFA7 (ENSTMTG00000018834) ENSTMTG00000018843 ENSTMTG00000018856 ANGPTL4 (ENSTMTG00000018884) ENSTMTG00000018897 MARCHF2 (ENSTMTG00000018916) HNRNPM (ENSTMTG00000018939) TIMM44 (ENSTMTG00000019096) CTXN1 (ENSTMTG00000019144) FBN3 (ENSTMTG00000019349) ENSTMTG00000020619 ENSTMTG00000020643 ENSTMTG00000020795 painted turtle MODERN SPECIES 763 ENSCPBG00000017117 TBXA2R (ENSCPBG00000017116) ENSCPBG00000017115 ENSCPBG00000017114 PIP5K1C (ENSCPBG00000017112) TJP3 (ENSCPBG00000017110) APBA3 (ENSCPBG00000017105) MRPL54 (ENSCPBG00000017103) ENSCPBG00000017102 ENSCPBG00000017101 ##31 MATK (ENSCPBG00000017100) ZFR2 (ENSCPBG00000017098) ELAVL1 (ENSCPBG00000017097) ENSCPBG00000017078 ENSCPBG00000017075 ENSCPBG00000017074 #22 ENSCPBG00000017071 ENSCPBG00000017070 NDUFA7 (ENSCPBG00000017068) RPS28 (ENSCPBG00000017064) KANK3 (ENSCPBG00000017062) ENSCPBG00000017060 ANGPTL4 (ENSCPBG00000017058) ENSCPBG00000017056 MARCHF2 (ENSCPBG00000017054) ENSCPBG00000017053 ENSCPBG00000017052 TIMM44 (ENSCPBG00000017050) Testudinidae ANCESTRAL SPECIES 49 ENSGT00390000003420.b ENSGT01030000234559.a.a.a ENSGT00950000183102.B ENSGT00940000159258 ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ##31 ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00390000006553.i ENSGT00910000144227.s.a ENSGT00940000154886.a.a.hb.a ENSGT00940000159478 ENSGT00940000161659 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.c ENSGT01030000234515.a.b.b.c.d ENSGT00940000163715.b Abingdon island giant tortoise MODERN SPECIES 851 ENSCABG00000000060 FPGT (ENSCABG00000000090) TNNI3K (ENSCABG00000000101) ENSCABG00000000178 CRYZ (ENSCABG00000000293) TYW3 (ENSCABG00000000416) LHX8 (ENSCABG00000000435) SLC44A5 (ENSCABG00000000461) ACADM (ENSCABG00000000562) RABGGTB (ENSCABG00000001291) MSH4 (ENSCABG00000001300) ST6GALNAC3 (ENSCABG00000001310) ENSCABG00000001311 ENSCABG00000001313 #22 ENSCABG00000001316 ENSCABG00000001322 RPS28 (ENSCABG00000001324) ENSCABG00000001331 ENSCABG00000001370 Goode s thornscrub tortoise MODERN SPECIES 14 TBXA2R (ENSGEVG00005014923) ENSGEVG00005014938 PIP5K1C (ENSGEVG00005014989) TJP3 (ENSGEVG00005015129) APBA3 (ENSGEVG00005015529) MRPL54 (ENSGEVG00005015567) ENSGEVG00005015581 ENSGEVG00005015609 ##31 ENSGEVG00005015652 ENSGEVG00005015729 ZFR2 (ENSGEVG00005015775) ELAVL1 (ENSGEVG00005015828) ENSGEVG00005015882 POLE4 (ENSGEVG00005016190) ENSGEVG00005016239 #21 ENSGEVG00005016266 #22 ENSGEVG00005016313 ENSGEVG00005016342 ENSGEVG00005016367 ENSGEVG00005016382 ANGPTL4 (ENSGEVG00005016482) RAB11B (ENSGEVG00005016921) MARCHF2 (ENSGEVG00005016941) ENSGEVG00005016957 ENSGEVG00005016972 TIMM44 (ENSGEVG00005017014) ENSGEVG00005017044 CTXN1 (ENSGEVG00005017067) FBN3 (ENSGEVG00005017147) ENSGEVG00005017835 ENSGEVG00005017860 Chinese turtle MODERN SPECIES 1159 ENSPSIG00000002764 #22 ENSPSIG00000002801 KANK3 (ENSPSIG00000002804) Lepidosauria ANCESTRAL SPECIES 129 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c Episquamata ANCESTRAL SPECIES 18 ENSGT00950000183110.b.a ENSGT00390000013841 ENSGT00940000161721 ENSGT00940000157113 ENSGT00940000160899 ENSGT00390000015467 ENSGT00390000003821 ENSGT00940000162255 ENSGT00940000160280 ENSGT01050000244924.a.a.b ENSGT00940000154739.B ENSGT00940000160580 ENSGT00940000164644 ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000161989 ENSGT00940000161493 ENSGT00940000163917.b ##31 Laterata ANCESTRAL SPECIES 56 ENSGT00940000159261 ENSGT00940000153487.b.a ENSGT00940000162053 ENSGT01030000234539.a.a.a ENSGT00940000154662 ENSGT00940000161753 ENSGT00940000154779.a.a #36 ENSGT00940000164644 ENSGT00940000160888 ENSGT00390000005847 #21 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00940000161178 ENSGT00940000158364 #34 ENSGT00390000004172.s ENSGT00940000163125 ENSGT00950000182993.A.a #17 ENSGT00550000075134 ENSGT00940000158800 ENSGT00940000155332.A ENSGT01050000244879.a.a.a ENSGT00390000016128 ENSGT00730000110920.b.a.a ENSGT00950000182907.b Common wall lizard MODERN SPECIES 9 MRPS18B (ENSPMRG00000021734) ENSPMRG00000021739 PPP1R10 (ENSPMRG00000021748) ABCF1 (ENSPMRG00000021774) POLE4 (ENSPMRG00000021791) ENSPMRG00000021796 GNL1 (ENSPMRG00000021811) ENSPMRG00000021828 CREB3L3 (ENSPMRG00000021853) MAP2K2 (ENSPMRG00000021863) ZBTB7A (ENSPMRG00000021873) PIAS4 (ENSPMRG00000021877) EEF2 (ENSPMRG00000021887) DAPK3 (ENSPMRG00000021899) ENSPMRG00000021924 #36 ENSPMRG00000021941 #22 ENSPMRG00000021954 ENSPMRG00000021964 ENSPMRG00000022044 ENSPMRG00000022243 FEM1A (ENSPMRG00000022251) TICAM1 (ENSPMRG00000022253) ENSPMRG00000022261 ARRDC5 (ENSPMRG00000022267) UHRF1 (ENSPMRG00000022277) KDM4B (ENSPMRG00000022291) PTPRS (ENSPMRG00000022813) ENSPMRG00000023636 ENSPMRG00000023642 ENSPMRG00000023645 ENSPMRG00000023647 Argentine black and white tegu MODERN SPECIES 109 ENSSMRG00000019650 CFD (ENSSMRG00000019649) PLPPR3 (ENSSMRG00000019648) PTBP1 (ENSSMRG00000019647) ENSSMRG00000019646 PALM (ENSSMRG00000019645) ENSSMRG00000019640 ENSSMRG00000019639 POLE4 (ENSSMRG00000019638) ENSSMRG00000019637 #21 ENSSMRG00000019636 #22 ENSSMRG00000019635 ENSSMRG00000019634 NDUFA7 (ENSSMRG00000019633) ENSSMRG00000019632 KANK3 (ENSSMRG00000019631) NMRK2 (ENSSMRG00000019630) ATCAY (ENSSMRG00000019629) #34 ENSSMRG00000019628 ENSSMRG00000019627 NRTN (ENSSMRG00000019626) #17 DUS3L (ENSSMRG00000019625) MLLT1 (ENSSMRG00000019624) ACSBG2 (ENSSMRG00000019531) RFX2 (ENSSMRG00000019530) PRR22 (ENSSMRG00000019529) Toxicofera ANCESTRAL SPECIES 60 ENSGT00940000164644 ENSGT00940000160888 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00960000190059 ENSGT00910000144227.t ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000161989 Elapidae ANCESTRAL SPECIES 59 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00960000190059 ENSGT00910000144227.t ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00940000158995 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.b ENSGT00940000161989 Elapidae_a ANCESTRAL SPECIES 130 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00390000006553 ENSGT00910000144227.s.a ENSGT00940000154886.a.a ENSGT00940000155876.m ENSGT00950000185125 ENSGT00910000144227.t ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000163126 ENSGT00960000193104 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b Acanthophiinae ANCESTRAL SPECIES 215 ENSGT00940000165063 #22 ENSGT00940000164521 ENSGT00390000006553 ENSGT00910000144227.s.a Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 650 ENSPTXG00000016165 #22 ENSPTXG00000016164 Eastern brown snake MODERN SPECIES 651 ENSPTXG00000016166 #22 ENSPTXG00000016167 Mainland tiger snake MODERN SPECIES 2901 ENSNSUG00000000473 #22 Blue-lipped sea krait MODERN SPECIES 281 ENSLLTG00000018225 #22 ENSLLTG00000018223 tuatara MODERN SPECIES 864 ELAVL1 (ENSSPUG00000002077) ENSSPUG00000002093 ENSSPUG00000002156 ENSSPUG00000002165 #22 NDUFA7 (ENSSPUG00000002182) RPS28 (ENSSPUG00000002186) KANK3 (ENSSPUG00000002196) ANGPTL4 (ENSSPUG00000002237) ENSSPUG00000002243 MARCHF2 (ENSSPUG00000002247) HNRNPM (ENSSPUG00000002270) TIMM44 (ENSSPUG00000002303) CTXN1 (ENSSPUG00000002310) ENSSPUG00000002316 Anura ANCESTRAL SPECIES ENSGT00940000165063 #22 Leishan spiny toad MODERN SPECIES MED11 (ENSLLEG00000000055) NDUFA11 (ENSLLEG00000000065) ENSLLEG00000000079 ENSLLEG00000000086 ENSLLEG00000000093 ENSLLEG00000000098 RANBP3 (ENSLLEG00000000124) #18 ENSLLEG00000000164 DPP9 (ENSLLEG00000000196) ENSLLEG00000000231 TNFAIP8L1 (ENSLLEG00000000244) DAPK3 (ENSLLEG00000000253) ENSLLEG00000000272 #36 ENSLLEG00000000300 ENSLLEG00000000332 #21 ENSLLEG00000000374 #22 ENSLLEG00000000541 ENSLLEG00000000501 ENSLLEG00000000630 ENSLLEG00000001115 SAFB (ENSLLEG00000001137) ENSLLEG00000001244 ENSLLEG00000001256 PPP1R3B (ENSLLEG00000001279) ENSLLEG00000001294 LMNB2 (ENSLLEG00000001327) TIMM13 (ENSLLEG00000001377) TMPRSS9 (ENSLLEG00000001418) ENSLLEG00000001463 SPPL2B (ENSLLEG00000001488) LSM7 (ENSLLEG00000001566) Coelacanth MODERN SPECIES 274 ENSLACG00000018035 LPL (ENSLACG00000018014) RAB8A (ENSLACG00000017882) #24 CIB3 (ENSLACG00000017857) #23 TAX1BP3 (ENSLACG00000017846) CTNS (ENSLACG00000017816) ENSLACG00000017800 ENSLACG00000017745 ENSLACG00000017673 slc1a8b (ENSLACG00000017647) ELAVL1 (ENSLACG00000017607) tspan37 (ENSLACG00000017588) ENSLACG00000017484 POLE4 (ENSLACG00000017480) pnhd (ENSLACG00000017449) #21 admp (ENSLACG00000017430) #22 ENSLACG00000017420 ENSLACG00000017317 ENSLACG00000017294 NDUFA7 (ENSLACG00000017258) kank3 (ENSLACG00000017209) ENSLACG00000017186 ANGPTL4 (ENSLACG00000017018) RAB11B (ENSLACG00000016974) MARCHF2 (ENSLACG00000022426) rab11bb (ENSLACG00000016857) HNRNPM (ENSLACG00000016814) TIMM44 (ENSLACG00000016754) ENSLACG00000016511 FBN3 (ENSLACG00000016154) ENSLACG00000015739