Neopterygii	ANCESTRAL SPECIES	305						ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00580000081623	ENSGT00390000009380	ENSGT00990000203541.a.a.a.a.b	ENSGT00940000157862	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT00390000017006	ENSGT00940000164657 #22
Osteoglossocephalai	ANCESTRAL SPECIES	42					ENSGT00930000152681	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT00390000004237	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00950000182818.B #21	ENSGT00810000125439.B.c.a ##24	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00530000063554.b ##9	ENSGT00940000158636 #28	ENSGT00940000157529	ENSGT00390000016228.b	ENSGT00390000016228.a	ENSGT00730000111061	ENSGT00390000013995.b.b.k.a
Clupeocephala	ANCESTRAL SPECIES	76	ENSGT00950000182931.B.a.a	ENSGT00940000177916	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00950000182818.B #21	ENSGT00810000125439.B.c.a ##24	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Euteleosteomorpha	ANCESTRAL SPECIES	21	ENSGT00950000182931.B.a.a.g	ENSGT00940000177916	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT01020000230394.e.a.a.a.a.b ##15	ENSGT00940000157255.c.b ##19	ENSGT00950000182818.B.a ##21	ENSGT00810000125439.B.c.a ##24	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b
Acanthomorphata	ANCESTRAL SPECIES	4	ENSGT00940000177916	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a	ENSGT00940000168203	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Euacanthomorphacea	ANCESTRAL SPECIES	7	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Carangaria	ANCESTRAL SPECIES	6	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT01090000263055 #18	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Tongue sole	MODERN SPECIES	16	ADCK2 (ENSCSEG00000009376) #7	ENSCSEG00000009410 #8	pus7 (ENSCSEG00000009505) #9	aplnr2 (ENSCSEG00000009570) #10	hdac10 (ENSCSEG00000009593) #11	parvb (ENSCSEG00000009627) #12	parvg (ENSCSEG00000009684) #13	SHISAL1 (ENSCSEG00000009690) #14	plxnb2b (ENSCSEG00000009715) #15	TUBGCP6 (ENSCSEG00000009894) #16	appl2 (ENSCSEG00000009967) #17	ENSCSEG00000010029 #18	NUAK1 (ENSCSEG00000010041) #19	ENSCSEG00000007228 #20	prl2 (ENSCSEG00000007262) #21	szl (ENSCSEG00000007381) #22	ENSCSEG00000007386 #23	NELL2 (ENSCSEG00000007407) #24	TMEM117 (ENSCSEG00000007537) #25	twf1a (ENSCSEG00000007561) #26	irak4 (ENSCSEG00000007582) #27	ADAMTS20 (ENSCSEG00000007625) #28	ENSCSEG00000007726 #29	irf7 (ENSCSEG00000007816) #30	RASSF7 (ENSCSEG00000007878) #31	LRRC56 (ENSCSEG00000007914) #32	hrasb (ENSCSEG00000007927) #33	zgc:123278 (ENSCSEG00000007936) #34	tsg101a (ENSCSEG00000007946) #35	ldha (ENSCSEG00000007969) #36	BRSK2 (ENSCSEG00000007990) #37
Turbot	MODERN SPECIES	1	ENSSMAG00000007013 #7	ENSSMAG00000007027 #8	ENSSMAG00000007173 #9	ENSSMAG00000007233	ENSSMAG00000007240 #10	hdac10 (ENSSMAG00000007246) #11	parvb (ENSSMAG00000007275) #12	parvg (ENSSMAG00000007332) #13	SHISAL1 (ENSSMAG00000007345) #14	plxnb2b (ENSSMAG00000007363) #15	ENSSMAG00000007401 #16	appl2 (ENSSMAG00000007446) #17	appl2 (ENSSMAG00000038118) #17	ENSSMAG00000007503 #19	ENSSMAG00000007542 #20	ENSSMAG00000007647 #22	ENSSMAG00000007662 #21	ENSSMAG00000007703 #23	NELL2 (ENSSMAG00000007710) #24	TMEM117 (ENSSMAG00000007827) #25	twf1a (ENSSMAG00000007848) #26	irak4 (ENSSMAG00000007871) #27	ADAMTS20 (ENSSMAG00000007900) #28	ENSSMAG00000008018	PPHLN1 (ENSSMAG00000008043)	PRICKLE1 (ENSSMAG00000008028)	YAF2 (ENSSMAG00000008054)	GXYLT1 (ENSSMAG00000008062)	PDZRN4 (ENSSMAG00000008100)	CNTN1 (ENSSMAG00000008140)	NRCAM (ENSSMAG00000008243)
Carangaria_A	ANCESTRAL SPECIES		ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Barramundi perch	MODERN SPECIES	144															NUAK1 (ENSLCAG00010024231) #19	szl (ENSLCAG00010024224) #22	prl2 (ENSLCAG00010024216) #21	ENSLCAG00010024212 #23	ENSLCAG00010023994 #20	ENSLCAG00010023885	TMEM117 (ENSLCAG00010023881) #25	twf1a (ENSLCAG00010023877) #26	irak4 (ENSLCAG00010023870) #27	ADAMTS20 (ENSLCAG00010023794) #28	ENSLCAG00010023754	prickle1a (ENSLCAG00010023751)	PPHLN1 (ENSLCAG00010023747)	YAF2 (ENSLCAG00010023745)	GXYLT1 (ENSLCAG00010023741)	PDZRN4 (ENSLCAG00010023738)	CNTN1 (ENSLCAG00010023704)
Seriola	ANCESTRAL SPECIES	5	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Greater amberjack	MODERN SPECIES	86	ADCK2 (ENSSDUG00000023257) #7	ENSSDUG00000023249 #8	pus7 (ENSSDUG00000023238) #9	zgc:172339 (ENSSDUG00000023230)	aplnr2 (ENSSDUG00000023212) #10	hdac10 (ENSSDUG00000023200) #11	parvb (ENSSDUG00000023195) #12	parvg (ENSSDUG00000023191) #13	ENSSDUG00000023189	SHISAL1 (ENSSDUG00000023184) #14	plxnb2b (ENSSDUG00000023152) #15	TUBGCP6 (ENSSDUG00000023141) #16	appl2 (ENSSDUG00000023125) #17	ENSSDUG00000023122	NUAK1 (ENSSDUG00000023118) #19	szl (ENSSDUG00000023113) #22	prl2 (ENSSDUG00000023101) #21	ENSSDUG00000023096 #23	ENSSDUG00000023078 #20	NELL2 (ENSSDUG00000023061) #24	ENSSDUG00000023056	TMEM117 (ENSSDUG00000023052) #25	twf1a (ENSSDUG00000023046) #26	irak4 (ENSSDUG00000023039) #27	ADAMTS20 (ENSSDUG00000022977) #28	ENSSDUG00000022967	prickle1a (ENSSDUG00000022955)	PPHLN1 (ENSSDUG00000022947)	YAF2 (ENSSDUG00000022939)	GXYLT1 (ENSSDUG00000022929)	PDZRN4 (ENSSDUG00000022923)
Yellowtail amberjack	MODERN SPECIES	2263	ADCK2 (ENSSLDG00000023751) #7	SRPK2 (ENSSLDG00000023702) #8	pus7 (ENSSLDG00000023664) #9	zgc:172339 (ENSSLDG00000023654)	aplnr2 (ENSSLDG00000023624) #10	hdac10 (ENSSLDG00000023599) #11	parvb (ENSSLDG00000023569) #12	parvg (ENSSLDG00000023544) #13	ENSSLDG00000023537	SHISAL1 (ENSSLDG00000023530) #14	plxnb2b (ENSSLDG00000023435) #15	TUBGCP6 (ENSSLDG00000023278) #16	appl2 (ENSSLDG00000023236) #17	NUAK1 (ENSSLDG00000023219) #19	ENSSLDG00000023183 #20	szl (ENSSLDG00000023164) #22	prl2 (ENSSLDG00000023159) #21	ENSSLDG00000023141 #23	NELL2 (ENSSLDG00000023098) #24	ENSSLDG00000023090	TMEM117 (ENSSLDG00000023073) #25	twf1a (ENSSLDG00000023055) #26	irak4 (ENSSLDG00000023042) #27	ADAMTS20 (ENSSLDG00000022994) #28	ENSSLDG00000022984	prickle1a (ENSSLDG00000022971)	YAF2 (ENSSLDG00000022945)	GXYLT1 (ENSSLDG00000022923)	PDZRN4 (ENSSLDG00000022904)
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01030000234621.E	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT01100000266314	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Climbing perch	MODERN SPECIES	19	ENSATEG00000019317	ENSATEG00000019300 #7	ENSATEG00000019263 #8	ENSATEG00000019185 #9	ENSATEG00000025742	ENSATEG00000019140 #10	hdac10 (ENSATEG00000019120) #11	parvb (ENSATEG00000019110) #12	parvg (ENSATEG00000019099) #13	SHISAL1 (ENSATEG00000026537) #14	plxnb2b (ENSATEG00000019037) #15	ENSATEG00000019005 #16	appl2 (ENSATEG00000018930) #17	ENSATEG00000029401 #19	ENSATEG00000018848 #20	ENSATEG00000018823 #22	ENSATEG00000018799 #23	NELL2 (ENSATEG00000018734) #24	TMEM117 (ENSATEG00000018705) #25	twf1a (ENSATEG00000018670) #26	irak4 (ENSATEG00000018652) #27	ADAMTS20 (ENSATEG00000018585) #28	ENSATEG00000018565	PRICKLE1 (ENSATEG00000018535)	PPHLN1 (ENSATEG00000027966)	YAF2 (ENSATEG00000028697)	GXYLT1 (ENSATEG00000018487)	PDZRN4 (ENSATEG00000018448)	CNTN1 (ENSATEG00000018430)	ENSATEG00000018349	ENSATEG00000018329
Siamese fighting fish	MODERN SPECIES	17	ENSBSLG00000025832	ADCK2 (ENSBSLG00000025828) #7	SRPK2 (ENSBSLG00000025737) #8	pus7 (ENSBSLG00000025571) #9	zgc:172339 (ENSBSLG00000025559)	aplnr2 (ENSBSLG00000025557) #10	hdac10 (ENSBSLG00000025456) #11	parvg (ENSBSLG00000025388) #13	SHISAL1 (ENSBSLG00000025358) #14	plxnb2b (ENSBSLG00000025313) #15	TUBGCP6 (ENSBSLG00000025236) #16	appl2 (ENSBSLG00000025115) #17	ENSBSLG00000025104	NUAK1 (ENSBSLG00000025103) #19	ENSBSLG00000025068 #20	szl (ENSBSLG00000025056) #22	ENSBSLG00000025054 #23	NELL2 (ENSBSLG00000024851) #24	ENSBSLG00000024815	TMEM117 (ENSBSLG00000024805) #25	twf1a (ENSBSLG00000024787) #26	irak4 (ENSBSLG00000024766) #27	ADAMTS20 (ENSBSLG00000024588) #28	ENSBSLG00000024536	ENSBSLG00000024532	prickle1a (ENSBSLG00000024530)	PPHLN1 (ENSBSLG00000024499)	YAF2 (ENSBSLG00000024491)	GXYLT1 (ENSBSLG00000024478)	PDZRN4 (ENSBSLG00000024471)	CNTN1 (ENSBSLG00000024323)
Zig-zag eel	MODERN SPECIES	20	ENSMAMG00000023151 #7	ENSMAMG00000023152 #8	ENSMAMG00000023153 #9	ENSMAMG00000027383	ENSMAMG00000023156 #10	hdac10 (ENSMAMG00000023157) #11	parvb (ENSMAMG00000023158) #12	parvg (ENSMAMG00000023159) #13	SHISAL1 (ENSMAMG00000023155) #14	plxnb2b (ENSMAMG00000023163) #15	ENSMAMG00000023164 #16	appl2 (ENSMAMG00000023165) #17	ENSMAMG00000025098	NUAK1 (ENSMAMG00000023166) #19	ENSMAMG00000023167 #20	ENSMAMG00000023168 #22	NELL2 (ENSMAMG00000023170) #24	TMEM117 (ENSMAMG00000023171) #25	ENSMAMG00000023172	twf1a (ENSMAMG00000023173) #26	irak4 (ENSMAMG00000023174) #27	ADAMTS20 (ENSMAMG00000023175) #28	ENSMAMG00000023176	PRICKLE1 (ENSMAMG00000023177)	PPHLN1 (ENSMAMG00000023178)	YAF2 (ENSMAMG00000023180)	PDZRN4 (ENSMAMG00000023181)	CNTN1 (ENSMAMG00000023182)	NRCAM (ENSMAMG00000023183)	ENSMAMG00000023184	dnajb9a (ENSMAMG00000023185)
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.l	ENSGT00940000168203	ENSGT00990000208084	ENSGT00390000013995.b.b.k.b
Tetraodontidae	ANCESTRAL SPECIES	11	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00940000168203	ENSGT00990000208084	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b
Tetraodon	MODERN SPECIES	4	ENSTNIG00000003414	DENND2A (ENSTNIG00000003415)	ADCK2 (ENSTNIG00000005807) #7	SRPK2 (ENSTNIG00000015966) #8	pus7 (ENSTNIG00000015967) #9	aplnr2 (ENSTNIG00000015968) #10	hdac10 (ENSTNIG00000015969) #11	parvb (ENSTNIG00000015970) #12	parvg (ENSTNIG00000015971) #13	SHISAL1 (ENSTNIG00000015972) #14	plxnb2b (ENSTNIG00000015973) #15	TUBGCP6 (ENSTNIG00000015974) #16	appl2 (ENSTNIG00000015975) #17	NUAK1 (ENSTNIG00000015976) #19	ENSTNIG00000015977 #20	szl (ENSTNIG00000015978) #22	prl2 (ENSTNIG00000001813) #21	ENSTNIG00000015979 #23	NELL2 (ENSTNIG00000015980) #24	TMEM117 (ENSTNIG00000015981) #25	twf1a (ENSTNIG00000015982) #26	irak4 (ENSTNIG00000015983) #27	ADAMTS20 (ENSTNIG00000015984) #28	prickle1a (ENSTNIG00000015985)	ENSTNIG00000015986	ENSTNIG00000015987	YAF2 (ENSTNIG00000015988)	GXYLT1 (ENSTNIG00000015989)	PDZRN4 (ENSTNIG00000015990)	CNTN1 (ENSTNIG00000015991)	ENSTNIG00000015992
Fugu	MODERN SPECIES	21	TEAD4 (ENSTRUG00000016489)	DENND2A (ENSTRUG00000016500)	ADCK2 (ENSTRUG00000016512) #7	ENSTRUG00000016517 #8	pus7 (ENSTRUG00000016532) #9	aplnr2 (ENSTRUG00000016544) #10	hdac10 (ENSTRUG00000016566) #11	parvg (ENSTRUG00000016590) #13	SHISAL1 (ENSTRUG00000016596) #14	plxnb2b (ENSTRUG00000016597) #15	TUBGCP6 (ENSTRUG00000016635) #16	appl2 (ENSTRUG00000016642) #17	ENSTRUG00000021275	NUAK1 (ENSTRUG00000027364) #19	ENSTRUG00000016678 #20	szl (ENSTRUG00000016691) #22	prl2 (ENSTRUG00000016693) #21	ENSTRUG00000016696 #23	NELL2 (ENSTRUG00000016697) #24	TMEM117 (ENSTRUG00000016723) #25	twf1a (ENSTRUG00000025657) #26	irak4 (ENSTRUG00000025150) #27	ADAMTS20 (ENSTRUG00000016748) #28	ENSTRUG00000023125	prickle1a (ENSTRUG00000016783)	ENSTRUG00000023687	YAF2 (ENSTRUG00000016786)	GXYLT1 (ENSTRUG00000016788)	PDZRN4 (ENSTRUG00000016792)	CNTN1 (ENSTRUG00000016799)	ENSTRUG00000016812
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.l	ENSGT00940000168203	ENSGT00990000208084	ENSGT00390000013995.b.b.k.b
Ballan wrasse	MODERN SPECIES	246			pus7 (ENSLBEG00000011849) #9	zgc:172339 (ENSLBEG00000011901)	aplnr2 (ENSLBEG00000011908) #10	hdac10 (ENSLBEG00000011985) #11	parvb (ENSLBEG00000012232) #12	parvg (ENSLBEG00000012301) #13	SHISAL1 (ENSLBEG00000012346) #14	plxnb2b (ENSLBEG00000012494) #15	TUBGCP6 (ENSLBEG00000012650) #16	appl2 (ENSLBEG00000012708) #17	ENSLBEG00000012790	NUAK1 (ENSLBEG00000012814) #19	ENSLBEG00000012849 #20	szl (ENSLBEG00000012889) #22	prl2 (ENSLBEG00000012937) #21	ENSLBEG00000013023 #23	NELL2 (ENSLBEG00000013108) #24	TMEM117 (ENSLBEG00000013219) #25	twf1a (ENSLBEG00000013291) #26	irak4 (ENSLBEG00000013356) #27	ADAMTS20 (ENSLBEG00000013401) #28
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.l	ENSGT00940000168203	ENSGT00990000208084	ENSGT00390000013995.b.b.k.b
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Large yellow croaker	MODERN SPECIES	492	DENND2A (ENSLCRG00005011306)	ADCK2 (ENSLCRG00005011334) #7	ENSLCRG00005011357 #8	pus7 (ENSLCRG00005012376) #9	zgc:172339 (ENSLCRG00005012387)	aplnr2 (ENSLCRG00005012388) #10	hdac10 (ENSLCRG00005012390) #11	parvb (ENSLCRG00005012409) #12	parvg (ENSLCRG00005012488) #13	SHISAL1 (ENSLCRG00005012490) #14	plxnb2b (ENSLCRG00005012544) #15	TUBGCP6 (ENSLCRG00005016205) #16	appl2 (ENSLCRG00005016251) #17	NUAK1 (ENSLCRG00005016912) #19	ENSLCRG00005016915 #20	szl (ENSLCRG00005017017) #22	prl2 (ENSLCRG00005017019) #21	ENSLCRG00005017021 #23	NELL2 (ENSLCRG00005017029) #24	TMEM117 (ENSLCRG00005018681) #25	twf1a (ENSLCRG00005018687) #26	irak4 (ENSLCRG00005018744) #27	ADAMTS20 (ENSLCRG00005018756) #28	ENSLCRG00005019037	ENSLCRG00005019040	PPHLN1 (ENSLCRG00005019041)	prickle1a (ENSLCRG00005019050)	ENSLCRG00005019054	YAF2 (ENSLCRG00005019058)	GXYLT1 (ENSLCRG00005019061)	PDZRN4 (ENSLCRG00005019063)
Gilthead seabream	MODERN SPECIES	22	DENND2A (ENSSAUG00010026619)	ADCK2 (ENSSAUG00010026615) #7	ENSSAUG00010026530 #8	pus7 (ENSSAUG00010026487) #9	zgc:172339 (ENSSAUG00010026485)	aplnr2 (ENSSAUG00010026484) #10	hdac10 (ENSSAUG00010026471) #11	parvb (ENSSAUG00010026441) #12	parvg (ENSSAUG00010026439) #13	SHISAL1 (ENSSAUG00010026435) #14	plxnb2b (ENSSAUG00010025990) #15	TUBGCP6 (ENSSAUG00010025930) #16	appl2 (ENSSAUG00010025467) #17	NUAK1 (ENSSAUG00010025463) #19	ENSSAUG00010025448 #20	szl (ENSSAUG00010025443) #22	prl2 (ENSSAUG00010025441) #21	ENSSAUG00010025439 #23	NELL2 (ENSSAUG00010024772) #24	ENSSAUG00010024750	TMEM117 (ENSSAUG00010024749) #25	twf1a (ENSSAUG00010024746) #26	irak4 (ENSSAUG00010024737) #27	ADAMTS20 (ENSSAUG00010024533) #28	ENSSAUG00010024519	prickle1a (ENSSAUG00010024517)	ENSSAUG00010024516	YAF2 (ENSSAUG00010024515)	YAF2 (ENSSAUG00010024514)	GXYLT1 (ENSSAUG00010024512)	PDZRN4 (ENSSAUG00010024511)
Perciformes	ANCESTRAL SPECIES	7	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00940000168203	ENSGT00990000208084	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a
Cottioidei	ANCESTRAL SPECIES	6	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00940000168203	ENSGT00990000208084	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b
Lumpfish	MODERN SPECIES	21	DENND2A (ENSCLMG00005018117)	ADCK2 (ENSCLMG00005018548) #7	ENSCLMG00005018552 #8	pus7 (ENSCLMG00005018558) #9	zgc:172339 (ENSCLMG00005018582)	aplnr2 (ENSCLMG00005018584) #10	hdac10 (ENSCLMG00005018589) #11	parvb (ENSCLMG00005018747) #12	parvg (ENSCLMG00005018761) #13	SHISAL1 (ENSCLMG00005018762) #14	plxnb2b (ENSCLMG00005018787) #15	TUBGCP6 (ENSCLMG00005019634) #16	appl2 (ENSCLMG00005019661) #17	NUAK1 (ENSCLMG00005019961) #19	ENSCLMG00005019964 #20	szl (ENSCLMG00005019969) #22	ENSCLMG00005019970 #23	NELL2 (ENSCLMG00005019975) #24	TMEM117 (ENSCLMG00005019977) #25	ENSCLMG00005019978	twf1a (ENSCLMG00005019979) #26	irak4 (ENSCLMG00005020008) #27	ENSCLMG00005020012	ADAMTS20 (ENSCLMG00005020015) #28	ENSCLMG00005020028	prickle1a (ENSCLMG00005020032)	PPHLN1 (ENSCLMG00005000074)	YAF2 (ENSCLMG00005000104)	GXYLT1 (ENSCLMG00005000113)	PDZRN4 (ENSCLMG00005000134)	CNTN1 (ENSCLMG00005000220)
Stickleback	MODERN SPECIES	14	DENND2A (ENSGACG00000003792)	ADCK2 (ENSGACG00000003821) #7	ENSGACG00000003832 #8	pus7 (ENSGACG00000003840) #9	zgc:172339 (ENSGACG00000003845)	aplnr2 (ENSGACG00000003849) #10	hdac10 (ENSGACG00000003854) #11	parvb (ENSGACG00000003874) #12	parvg (ENSGACG00000003899) #13	SHISAL1 (ENSGACG00000003905) #14	plxnb2b (ENSGACG00000003911) #15	TUBGCP6 (ENSGACG00000003928) #16	appl2 (ENSGACG00000003947) #17	NUAK1 (ENSGACG00000003957) #19	ENSGACG00000003977 #20	szl (ENSGACG00000003997) #22	ENSGACG00000004000 #23	NELL2 (ENSGACG00000004004) #24	TMEM117 (ENSGACG00000004020) #25	ENSGACG00000004026	twf1a (ENSGACG00000004028) #26	irak4 (ENSGACG00000004050) #27	ADAMTS20 (ENSGACG00000004063) #28	prickle1a (ENSGACG00000004088)	ENSGACG00000004098	ENSGACG00000004099	YAF2 (ENSGACG00000004103)	GXYLT1 (ENSGACG00000004112)	PDZRN4 (ENSGACG00000004122)	CNTN1 (ENSGACG00000004129)	ENSGACG00000004140
Perciformes_a	ANCESTRAL SPECIES	7	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Channel bull blenny	MODERN SPECIES	20	TEAD4 (ENSCGOG00000022697)	DENND2A (ENSCGOG00000022579)	ADCK2 (ENSCGOG00000022567) #7	ENSCGOG00000022555 #8	pus7 (ENSCGOG00000022487) #9	aplnr2 (ENSCGOG00000022482) #10	hdac10 (ENSCGOG00000022340) #11	parvb (ENSCGOG00000022264) #12	parvg (ENSCGOG00000022261) #13	SHISAL1 (ENSCGOG00000022260) #14	plxnb2b (ENSCGOG00000021915) #15	TUBGCP6 (ENSCGOG00000021830) #16	appl2 (ENSCGOG00000021540) #17	NUAK1 (ENSCGOG00000021516) #19	ENSCGOG00000021509 #20	szl (ENSCGOG00000021502) #22	prl2 (ENSCGOG00000021489) #21	ENSCGOG00000021488 #23	NELL2 (ENSCGOG00000020379) #24	ENSCGOG00000020343	TMEM117 (ENSCGOG00000020246) #25	twf1a (ENSCGOG00000020181) #26	irak4 (ENSCGOG00000020003) #27	ADAMTS20 (ENSCGOG00000019903) #28	ENSCGOG00000019897	prickle1a (ENSCGOG00000019892)	PPHLN1 (ENSCGOG00000019889)	YAF2 (ENSCGOG00000019886)	GXYLT1 (ENSCGOG00000019881)	PDZRN4 (ENSCGOG00000019879)	CNTN1 (ENSCGOG00000018721)
Pike perch	MODERN SPECIES	6	ADCK2 (ENSSLUG00000013866) #7	ENSSLUG00000013827 #8	pus7 (ENSSLUG00000012759) #9	zgc:172339 (ENSSLUG00000012701)	aplnr2 (ENSSLUG00000012697) #10	hdac10 (ENSSLUG00000012634) #11	parvb (ENSSLUG00000012548) #12	parvg (ENSSLUG00000012527) #13	SHISAL1 (ENSSLUG00000012521) #14	ENSSLUG00000012519	plxnb2b (ENSSLUG00000010449) #15	TUBGCP6 (ENSSLUG00000010230) #16	appl2 (ENSSLUG00000009320) #17	NUAK1 (ENSSLUG00000009267) #19	ENSSLUG00000009182 #20	szl (ENSSLUG00000009139) #22	prl2 (ENSSLUG00000009117) #21	NELL2 (ENSSLUG00000005606) #24	ENSSLUG00000005393	TMEM117 (ENSSLUG00000005362) #25	twf1a (ENSSLUG00000005325) #26	irak4 (ENSSLUG00000005222) #27	ADAMTS20 (ENSSLUG00000004961) #28	ENSSLUG00000004927	prickle1a (ENSSLUG00000004921)	PPHLN1 (ENSSLUG00000004908)	YAF2 (ENSSLUG00000004904)	GXYLT1 (ENSSLUG00000004900)	ENSSLUG00000023430	PDZRN4 (ENSSLUG00000023424)	CNTN1 (ENSSLUG00000021304)
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Pomacentridae	ANCESTRAL SPECIES	1	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00940000154368.s.j	ENSGT01020000230583.d	ENSGT00950000182857.a.b	ENSGT01020000230583.c
Pomacentridae_A	ANCESTRAL SPECIES	9	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810.i #16	ENSGT00940000157810.j #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00940000168203	ENSGT01020000230583.c	ENSGT00940000177257	ENSGT00940000154368.s.j	ENSGT01020000230583.d
Amphiprion	ANCESTRAL SPECIES	4	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00510000050415.C.i.a.b.i.a.a	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810.i #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000182818.B.b #21	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00940000168203	ENSGT01020000230583.c	ENSGT00940000154368.s.j	ENSGT01020000230583.d.b	ENSGT00950000182857.a.b.db.a.a
Clown anemonefish	MODERN SPECIES	1347													NUAK1 (ENSAOCG00000004289) #19	ENSAOCG00000004267 #20	prl2 (ENSAOCG00000004241) #21	szl (ENSAOCG00000004219) #22	ENSAOCG00000004203 #23	NELL2 (ENSAOCG00000004181) #24	steap4 (ENSAOCG00000004145)	ENSAOCG00000004133	ENSAOCG00000004128	ENSAOCG00000004111	ENSAOCG00000004086	steap4 (ENSAOCG00000004052)	glipr2l (ENSAOCG00000004026)	ENSAOCG00000004020	ENSAOCG00000000120	ATP4A (ENSAOCG00000004011)	DENND3 (ENSAOCG00000003995)	SLC45A4 (ENSAOCG00000003972)	GPR20 (ENSAOCG00000003950)
Orange clownfish	MODERN SPECIES	18	pus7 (ENSAPEG00000007260) #9	zgc:172339 (ENSAPEG00000007291)	aplnr2 (ENSAPEG00000007317) #10	ENSAPEG00000007398	hdac10 (ENSAPEG00000007437) #11	parvb (ENSAPEG00000007458) #12	parvg (ENSAPEG00000007538) #13	SHISAL1 (ENSAPEG00000007559) #14	plxnb2b (ENSAPEG00000007663) #15	ENSAPEG00000007792 #16	ENSAPEG00000007801 #16	appl2 (ENSAPEG00000007884) #17	ENSAPEG00000007960	NUAK1 (ENSAPEG00000007974) #19	ENSAPEG00000007996 #20	szl (ENSAPEG00000008054) #22	prl2 (ENSAPEG00000008074) #21	ENSAPEG00000008082 #23	NELL2 (ENSAPEG00000008115) #24	TMEM117 (ENSAPEG00000008174) #25	ENSAPEG00000008207	twf1a (ENSAPEG00000008222) #26	irak4 (ENSAPEG00000008256) #27	ADAMTS20 (ENSAPEG00000008305) #28	ENSAPEG00000008433	prickle1a (ENSAPEG00000008442)	ENSAPEG00000008478	ENSAPEG00000008492	ENSAPEG00000008503	ENSAPEG00000008520	ENSAPEG00000008536
Spiny chromis	MODERN SPECIES	1277											ENSAPOG00000010812 #16	appl2 (ENSAPOG00000010756) #17	NUAK1 (ENSAPOG00000010655) #19	ENSAPOG00000010615 #20	prl2 (ENSAPOG00000001058) #21	szl (ENSAPOG00000010482) #22	ENSAPOG00000010441 #23	ENSAPOG00000010429 #24
Bicolor damselfish	MODERN SPECIES	301				pus7 (ENSSPAG00000022258) #9	zgc:172339 (ENSSPAG00000022278)	aplnr2 (ENSSPAG00000022248) #10	hdac10 (ENSSPAG00000022235) #11	parvb (ENSSPAG00000022201) #12	parvg (ENSSPAG00000022193) #13	SHISAL1 (ENSSPAG00000022185) #14	plxnb2b (ENSSPAG00000022109) #15	TUBGCP6 (ENSSPAG00000022086) #16	appl2 (ENSSPAG00000022052) #17	NUAK1 (ENSSPAG00000022025) #19	ENSSPAG00000021986 #20	szl (ENSSPAG00000021967) #22	prl2 (ENSSPAG00000021954) #21	ENSSPAG00000021942 #23	NELL2 (ENSSPAG00000021919) #24	ENSSPAG00000021905	TMEM117 (ENSSPAG00000021874) #25	twf1a (ENSSPAG00000021863) #26	irak4 (ENSSPAG00000021849) #27	ADAMTS20 (ENSSPAG00000021797) #28	ENSSPAG00000021783	prickle1a (ENSSPAG00000021758)	PPHLN1 (ENSSPAG00000021738)	ENSSPAG00000021713	ENSSPAG00000021700	ENSSPAG00000021687	ENSSPAG00000021681
Cichlidae	ANCESTRAL SPECIES	5	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000156209.v.b	ENSGT00530000063554.a #9	ENSGT01020000230394.e.a.a.a.a.a.h.b #15	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a.h.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000178174	ENSGT00940000156209.v.b	ENSGT00530000063554.a #9	ENSGT01020000230394.e.a.a.a.a.a.h.b.a #15	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a.h.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000178174	ENSGT00940000156209.v.b	ENSGT00530000063554.a #9	ENSGT01020000230394.e.a.a.a.a.a.h.b.a #15	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a.h.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a.e.a	ENSGT00940000155419.c.a
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00940000178174	ENSGT00940000156209.v.b	ENSGT00530000063554.a #9	ENSGT01020000230394.e.a.a.a.a.a.h.b.a #15	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a.h.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a.e.a	ENSGT00940000155419.c.a
P. nyererei	MODERN SPECIES	322	ENSPNYG00000006734 #15	zgc:172339 (ENSPNYG00000006728)	aplnr2 (ENSPNYG00000006632) #10	hdac10 (ENSPNYG00000006594) #11	parvb (ENSPNYG00000006572) #12	parvg (ENSPNYG00000006537) #13	SHISAL1 (ENSPNYG00000006503) #14	ENSPNYG00000006477 #15	ENSPNYG00000006470	ENSPNYG00000006434 #15	ENSPNYG00000006423 #16	TUBGCP6 (ENSPNYG00000006380) #16	appl2 (ENSPNYG00000006326) #17	NUAK1 (ENSPNYG00000006291) #19	ENSPNYG00000006158 #20	szl (ENSPNYG00000006085) #22	ENSPNYG00000006058 #23	NELL2 (ENSPNYG00000006005) #24	ENSPNYG00000005989	TMEM117 (ENSPNYG00000005964) #25	twf1a (ENSPNYG00000005936) #26	irak4 (ENSPNYG00000005723) #27	ADAMTS20 (ENSPNYG00000005239) #28	ENSPNYG00000005157	prickle1a (ENSPNYG00000005140)	PPHLN1 (ENSPNYG00000005128)	YAF2 (ENSPNYG00000005107)	GXYLT1 (ENSPNYG00000005077)	PDZRN4 (ENSPNYG00000005050)	CNTN1 (ENSPNYG00000004847)	NRCAM (ENSPNYG00000004759)
Haplochromini_B	ANCESTRAL SPECIES	20	ENSGT00940000178174	ENSGT00940000156209.v.b	ENSGT00530000063554.a #9	ENSGT01020000230394.e.a.a.a.a.a.h.b.a #15	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a.h.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a.e.a	ENSGT00940000155419.c.a
Eastern happy	MODERN SPECIES	19	dnai4 (ENSACLG00000026488)	pus7 (ENSACLG00000026503) #9	ENSACLG00000026556 #15	zgc:172339 (ENSACLG00000026586)	aplnr2 (ENSACLG00000026634) #10	hdac10 (ENSACLG00000026638) #11	parvb (ENSACLG00000026651) #12	parvg (ENSACLG00000026683) #13	SHISAL1 (ENSACLG00000026699) #14	plxnb2b (ENSACLG00000026742) #15	ENSACLG00000026916 #16	TUBGCP6 (ENSACLG00000026919) #16	appl2 (ENSACLG00000026945) #17	NUAK1 (ENSACLG00000026981) #19	ENSACLG00000026991 #20	szl (ENSACLG00000027030) #22	ENSACLG00000027039 #23	NELL2 (ENSACLG00000027059) #24	TMEM117 (ENSACLG00000027085) #25	ENSACLG00000027109	twf1a (ENSACLG00000027122) #26	irak4 (ENSACLG00000000097) #27	ADAMTS20 (ENSACLG00000000156) #28	ENSACLG00000000409	prickle1a (ENSACLG00000000425)	PPHLN1 (ENSACLG00000000449)	YAF2 (ENSACLG00000000456)	GXYLT1 (ENSACLG00000000481)	ENSACLG00000000539	PDZRN4 (ENSACLG00000000551)	CNTN1 (ENSACLG00000000904)
Zebra mbuna	MODERN SPECIES	1110	ENSMZEG00005009282	ENSMZEG00005009259 #8	ENSMZEG00005009236	pus7 (ENSMZEG00005009209) #9	zgc:172339 (ENSMZEG00005009203)	aplnr2 (ENSMZEG00005009189) #10	hdac10 (ENSMZEG00005009171) #11	parvb (ENSMZEG00005009094) #12	parvg (ENSMZEG00005009053) #13	SHISAL1 (ENSMZEG00005009036) #14	plxnb2b (ENSMZEG00005008978) #15	TUBGCP6 (ENSMZEG00005008906) #16	appl2 (ENSMZEG00005008846) #17	NUAK1 (ENSMZEG00005008818) #19	ENSMZEG00005008789 #20	szl (ENSMZEG00005008769) #22	ENSMZEG00005008756 #23	NELL2 (ENSMZEG00005008701) #24	ENSMZEG00005008680	TMEM117 (ENSMZEG00005008658) #25	twf1a (ENSMZEG00005008622) #26	irak4 (ENSMZEG00005008598) #27	ADAMTS20 (ENSMZEG00005008339) #28	ENSMZEG00005008290	prickle1a (ENSMZEG00005008270)	YAF2 (ENSMZEG00005008258)	GXYLT1 (ENSMZEG00005008242)	PDZRN4 (ENSMZEG00005008227)	ENSMZEG00005008199	CNTN1 (ENSMZEG00005008112)	NRCAM (ENSMZEG00005007891)
Burton s mouthbrooder	MODERN SPECIES	359	dnai4 (ENSHBUG00000015360)	pus7 (ENSHBUG00000015448) #9	zgc:172339 (ENSHBUG00000015457)	aplnr2 (ENSHBUG00000015466) #10	hdac10 (ENSHBUG00000015497) #11	parvb (ENSHBUG00000015597) #12	parvg (ENSHBUG00000015615) #13	SHISAL1 (ENSHBUG00000015630) #14	ENSHBUG00000015653 #15	ENSHBUG00000015669	plxnb2b (ENSHBUG00000015745) #15	TUBGCP6 (ENSHBUG00000015776) #16	appl2 (ENSHBUG00000015788) #17	NUAK1 (ENSHBUG00000015817) #19	ENSHBUG00000015831	szl (ENSHBUG00000000469) #22	ENSHBUG00000015852 #23	NELL2 (ENSHBUG00000015919) #24	ENSHBUG00000015929	TMEM117 (ENSHBUG00000015981) #25	twf1a (ENSHBUG00000016028) #26	irak4 (ENSHBUG00000016034) #27
Lyretail cichlid	MODERN SPECIES	293	ENSNBRG00000019050	pus7 (ENSNBRG00000019065) #9	ENSNBRG00000019098 #15	zgc:172339 (ENSNBRG00000019115)	aplnr2 (ENSNBRG00000019156) #10	hdac10 (ENSNBRG00000019276) #11	parvb (ENSNBRG00000019312) #12	parvg (ENSNBRG00000019341) #13	SHISAL1 (ENSNBRG00000019355) #14	plxnb2b (ENSNBRG00000019392) #15	TUBGCP6 (ENSNBRG00000019527) #16	appl2 (ENSNBRG00000019576) #17	NUAK1 (ENSNBRG00000019617) #19	ENSNBRG00000019646 #20	ENSNBRG00000019695 #23	szl (ENSNBRG00000019712) #22	NELL2 (ENSNBRG00000019731) #24	TMEM117 (ENSNBRG00000019772) #25	twf1a (ENSNBRG00000019791) #26	irak4 (ENSNBRG00000019813) #27	ADAMTS20 (ENSNBRG00000019988) #28	ENSNBRG00000020637	prickle1a (ENSNBRG00000020651)	PPHLN1 (ENSNBRG00000020669)	YAF2 (ENSNBRG00000020680)	GXYLT1 (ENSNBRG00000020710)	PDZRN4 (ENSNBRG00000020749)	ENSNBRG00000020773	CNTN1 (ENSNBRG00000020792)	NRCAM (ENSNBRG00000020897)	ENSNBRG00000020948
Nile tilapia	MODERN SPECIES	19	dnai4 (ENSONIG00000008806)	pus7 (ENSONIG00000008804) #9	ENSONIG00000008802 #15	zgc:172339 (ENSONIG00000008801)	aplnr2 (ENSONIG00000034057) #10	hdac10 (ENSONIG00000008796) #11	parvb (ENSONIG00000008792) #12	parvg (ENSONIG00000008791) #13	SHISAL1 (ENSONIG00000028796) #14	plxnb2b (ENSONIG00000008781) #15	TUBGCP6 (ENSONIG00000008780) #16	appl2 (ENSONIG00000008773) #17	ENSONIG00000027376	NUAK1 (ENSONIG00000032856) #19	ENSONIG00000008767 #20	szl (ENSONIG00000008765) #22	ENSONIG00000042325 #23	NELL2 (ENSONIG00000008749) #24	TMEM117 (ENSONIG00000008743) #25	twf1a (ENSONIG00000008739) #26	irak4 (ENSONIG00000008733) #27	ADAMTS20 (ENSONIG00000008715) #28	ENSONIG00000021092	prickle1a (ENSONIG00000008712)	PPHLN1 (ENSONIG00000025900)	YAF2 (ENSONIG00000008709)	GXYLT1 (ENSONIG00000008707)	PDZRN4 (ENSONIG00000008705)	CNTN1 (ENSONIG00000008695)	NRCAM (ENSONIG00000008686)	ENSONIG00000008681
Midas cichlid	MODERN SPECIES	108				zgc:172339 (ENSACIG00000001431)	aplnr2 (ENSACIG00000001441) #10	parvb (ENSACIG00000001507) #12	parvg (ENSACIG00000001620) #13	SHISAL1 (ENSACIG00000001653) #14	plxnb2b (ENSACIG00000001687) #15	TUBGCP6 (ENSACIG00000002063) #16	appl2 (ENSACIG00000002233) #17	ENSACIG00000002272	NUAK1 (ENSACIG00000002275) #19	ENSACIG00000002296 #20	ENSACIG00000002336 #23	szl (ENSACIG00000002353) #22	NELL2 (ENSACIG00000002376) #24	TMEM117 (ENSACIG00000002428) #25	twf1a (ENSACIG00000002443) #26	irak4 (ENSACIG00000002462) #27	ADAMTS20 (ENSACIG00000002491) #28	ENSACIG00000002579	prickle1a (ENSACIG00000002591)	ENSACIG00000002610	YAF2 (ENSACIG00000002635)	GXYLT1 (ENSACIG00000002649)	PDZRN4 (ENSACIG00000002668)	CNTN1 (ENSACIG00000002688)	NRCAM (ENSACIG00000002744)	ENSACIG00000002797	dnajb9a (ENSACIG00000002817)
Atherinomorphae	ANCESTRAL SPECIES	5	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01030000234621.E	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01030000234518.C.b	ENSGT00390000013052 #25	ENSGT01030000234621.E	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Aplocheiloidei	ANCESTRAL SPECIES	1										ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01030000234518.C.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Mangrove rivulus	MODERN SPECIES	243										plxnb2b (ENSKMAG00000009913) #15	TUBGCP6 (ENSKMAG00000009852) #16	appl2 (ENSKMAG00000009753) #17	ENSKMAG00000009719	NUAK1 (ENSKMAG00000009701) #19	ENSKMAG00000009655 #20	szl (ENSKMAG00000009631) #22	ENSKMAG00000009609 #23	NELL2 (ENSKMAG00000009511) #24	ENSKMAG00000009486	TMEM117 (ENSKMAG00000009443) #25	twf1a (ENSKMAG00000009419) #26	irak4 (ENSKMAG00000009370) #27
Turquoise killifish	MODERN SPECIES	1622	NT5DC3 (ENSNFUG00015017657)	ENSNFUG00015017645	ENSNFUG00015017637	FLNC (ENSNFUG00015016322)	ENSNFUG00015016236	nr2c1 (ENSNFUG00015015453)	TMCC3 (ENSNFUG00015015398)	hal (ENSNFUG00015014085)	LMO2 (ENSNFUG00015014010)	caprin1b (ENSNFUG00015025177)	PLXNB2B (ENSNFUG00015025007) #15	TUBGCP6 (ENSNFUG00015024926) #16	APPL2 (ENSNFUG00015024841) #17	ENSNFUG00015024836	ENSNFUG00015024821 #20	szl (ENSNFUG00015024815) #22	DBX2 (ENSNFUG00015024814) #23	NUAK1 (ENSNFUG00015024810) #19	NELL2 (ENSNFUG00015024744) #24	TMEM117 (ENSNFUG00015024705) #25	IRAK4 (ENSNFUG00015024700) #27	twf1a (ENSNFUG00015024697) #26	ADAMTS20 (ENSNFUG00015024443) #28	ENSNFUG00015024381	YAF2 (ENSNFUG00015024379)	GXYLT1B (ENSNFUG00015024376)	ENSNFUG00015024374	PDZRN4 (ENSNFUG00015024360)	CNTN1 (ENSNFUG00015023371)	NRCAM (ENSNFUG00015022871)	ENSNFUG00015022817
Cyprinodontoidei	ANCESTRAL SPECIES	7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01030000234518.C.b	ENSGT00390000013052 #25	ENSGT01030000234621.E	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01030000234518.C.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Poecilia	ANCESTRAL SPECIES	5	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01030000234518.C.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
NAME_6	ANCESTRAL SPECIES	31	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT01030000234518.C.b	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792.f #27	ENSGT00940000158792.e #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a
Sailfin molly	MODERN SPECIES	1211														NUAK1 (ENSPLAG00000020482) #19	ENSPLAG00000020493 #20	szl (ENSPLAG00000020507) #22	ENSPLAG00000020526 #23	NELL2 (ENSPLAG00000020619) #24
Amazon molly	MODERN SPECIES	269	zgc:172339 (ENSPFOG00000011091)	aplnr2 (ENSPFOG00000011088) #10	hdac10 (ENSPFOG00000011004) #11	pus7 (ENSPFOG00000010669) #9	zgc:172339 (ENSPFOG00000010661)	aplnr2 (ENSPFOG00000010655) #10	hdac10 (ENSPFOG00000010646) #11	parvb (ENSPFOG00000010724) #12	parvg (ENSPFOG00000010536) #13	SHISAL1 (ENSPFOG00000010515) #14	plxnb2b (ENSPFOG00000010031) #15	TUBGCP6 (ENSPFOG00000009509) #16	appl2 (ENSPFOG00000008838) #17	NUAK1 (ENSPFOG00000008728) #19	ENSPFOG00000008331 #20	szl (ENSPFOG00000008307) #22	ENSPFOG00000008292 #23	NELL2 (ENSPFOG00000007645) #24	ENSPFOG00000020311	TMEM117 (ENSPFOG00000007536) #25	twf1a (ENSPFOG00000007332) #26	irak4 (ENSPFOG00000007106) #27	irak4 (ENSPFOG00000007094) #27	ADAMTS20 (ENSPFOG00000005633) #28	ENSPFOG00000005594	prickle1a (ENSPFOG00000005504)	PPHLN1 (ENSPFOG00000005469)	YAF2 (ENSPFOG00000005422)	GXYLT1 (ENSPFOG00000005277)	ENSPFOG00000023657	PDZRN4 (ENSPFOG00000005033)
Guppy	MODERN SPECIES	458	enpp2 (ENSPREG00000010633)	NOD1 (ENSPREG00000010614)	znrf2b (ENSPREG00000010602)	fzd1 (ENSPREG00000010596)	cdk14 (ENSPREG00000010573)	ENSPREG00000010555	ENSPREG00000010528	ENSPREG00000010469	ENSPREG00000010436	ADGRB1 (ENSPREG00000010366)	ENSPREG00000010328	ENSPREG00000010319	si:ch211-198c19.1 (ENSPREG00000010310)	NUAK1 (ENSPREG00000010290) #19	ENSPREG00000010246 #20	szl (ENSPREG00000010223) #22	ENSPREG00000010214 #23	NELL2 (ENSPREG00000010004) #24	TMEM117 (ENSPREG00000009931) #25	twf1a (ENSPREG00000009901) #26	irak4 (ENSPREG00000009873) #27	ADAMTS20 (ENSPREG00000009700) #28	ENSPREG00000009646	prickle1a (ENSPREG00000009636)	PPHLN1 (ENSPREG00000009629)	YAF2 (ENSPREG00000009617)	GXYLT1 (ENSPREG00000009558)	PDZRN4 (ENSPREG00000009526)	CNTN1 (ENSPREG00000009441)	NRCAM (ENSPREG00000008863)	PNPLA8 (ENSPREG00000008719)
Platyfish	MODERN SPECIES	11	IREB2 (ENSXMAG00000002195)	snx1a (ENSXMAG00000001948)	ENSXMAG00000001972	AP3B2 (ENSXMAG00000001977)	ENSXMAG00000002015	ENSXMAG00000028949	ENSXMAG00000029659	parvb (ENSXMAG00000017574) #12	parvg (ENSXMAG00000020954) #13	SHISAL1 (ENSXMAG00000029174) #14	plxnb2b (ENSXMAG00000017504) #15	TUBGCP6 (ENSXMAG00000017489) #16	appl2 (ENSXMAG00000017453) #17	NUAK1 (ENSXMAG00000004754) #19	ENSXMAG00000004708 #20	szl (ENSXMAG00000004694) #22	ENSXMAG00000004689 #23	NELL2 (ENSXMAG00000017418) #24	TMEM117 (ENSXMAG00000029251) #25	twf1a (ENSXMAG00000017399) #26	irak4 (ENSXMAG00000028973) #27	ADAMTS20 (ENSXMAG00000017324) #28	ENSXMAG00000021158	prickle1a (ENSXMAG00000017299)	ENSXMAG00000028228	PPHLN1 (ENSXMAG00000029948)	YAF2 (ENSXMAG00000025433)	GXYLT1 (ENSXMAG00000017282)	PDZRN4 (ENSXMAG00000029582)	CNTN1 (ENSXMAG00000017213)	NRCAM (ENSXMAG00000017134)
NAME_4	ANCESTRAL SPECIES	26	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01030000234621.E	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Mummichog	MODERN SPECIES	278									plxnb2b (ENSFHEG00000001250) #15	ENSFHEG00000001235 #16	ENSFHEG00000001231 #16	appl2 (ENSFHEG00000001219) #17	ENSFHEG00000000572	NUAK1 (ENSFHEG00000023219) #19	ENSFHEG00000023180 #20	szl (ENSFHEG00000023131) #22	ENSFHEG00000023091 #23	NELL2 (ENSFHEG00000023071) #24	TMEM117 (ENSFHEG00000022998) #25	ENSFHEG00000022984	twf1a (ENSFHEG00000022971) #26	irak4 (ENSFHEG00000000562) #27
Sheepshead minnow	MODERN SPECIES	367												appl2 (ENSCVAG00000002617) #17	ENSCVAG00000002624	NUAK1 (ENSCVAG00000002632) #19	ENSCVAG00000000855 #20	szl (ENSCVAG00000002661) #22	ENSCVAG00000002663 #23	NELL2 (ENSCVAG00000002685) #24	TMEM117 (ENSCVAG00000002697) #25	twf1a (ENSCVAG00000002707) #26	irak4 (ENSCVAG00000000870) #27	ADAMTS20 (ENSCVAG00000002759) #28	ENSCVAG00000002767	prickle1a (ENSCVAG00000002784)	YAF2 (ENSCVAG00000002793)	GXYLT1 (ENSCVAG00000002805)	PDZRN4 (ENSCVAG00000002817)
Oryzias	ANCESTRAL SPECIES	16	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a	ENSGT00940000154738.a.q
Oryzias_b	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00610000087444	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b.c	ENSGT00940000155915.a	ENSGT00940000155419.c.a	ENSGT00940000154738.a.q
Indian medaka	MODERN SPECIES	15	SRPK2 (ENSOMEG00000008236) #8	pus7 (ENSOMEG00000008389) #9	zgc:172339 (ENSOMEG00000008413)	ENSOMEG00000008445	barhl2 (ENSOMEG00000008466)	ENSOMEG00000000209	parvb (ENSOMEG00000008549) #12	parvg (ENSOMEG00000008578) #13	SHISAL1 (ENSOMEG00000008614) #14	plxnb2b (ENSOMEG00000008933) #15	TUBGCP6 (ENSOMEG00000009031) #16	appl2 (ENSOMEG00000009134) #17	ENSOMEG00000009163	NUAK1 (ENSOMEG00000009190) #19	ENSOMEG00000009330 #20	szl (ENSOMEG00000009356) #22	ENSOMEG00000009373 #23	NELL2 (ENSOMEG00000009595) #24	TMEM117 (ENSOMEG00000009692) #25	twf1a (ENSOMEG00000009732) #26	irak4 (ENSOMEG00000009757) #27	ADAMTS20 (ENSOMEG00000009983) #28	ENSOMEG00000010016	prickle1a (ENSOMEG00000010059)	PPHLN1 (ENSOMEG00000010079)	YAF2 (ENSOMEG00000010094)	GXYLT1 (ENSOMEG00000010162)	PDZRN4 (ENSOMEG00000010211)	CNTN1 (ENSOMEG00000010258)	ENSOMEG00000010365	ENSOMEG00000010476
Javanese ricefish	MODERN SPECIES	20	DENND2A (ENSOJAG00000008938)	ADCK2 (ENSOJAG00000009056) #7	ENSOJAG00000009164 #8	pus7 (ENSOJAG00000009532) #9	zgc:172339 (ENSOJAG00000010378)	aplnr2 (ENSOJAG00000010387) #10	parvb (ENSOJAG00000010403) #12	parvg (ENSOJAG00000010592) #13	SHISAL1 (ENSOJAG00000010607) #14	plxnb2b (ENSOJAG00000010880) #15	TUBGCP6 (ENSOJAG00000012979) #16	appl2 (ENSOJAG00000014144) #17	ENSOJAG00000015261	NUAK1 (ENSOJAG00000015281) #19	ENSOJAG00000015339 #20	szl (ENSOJAG00000015702) #22	ENSOJAG00000015723 #23	NELL2 (ENSOJAG00000015835) #24	TMEM117 (ENSOJAG00000017018) #25	twf1a (ENSOJAG00000017105) #26	irak4 (ENSOJAG00000017320) #27	ADAMTS20 (ENSOJAG00000017500) #28	ENSOJAG00000018778	prickle1a (ENSOJAG00000018801)	YAF2 (ENSOJAG00000018820)	GXYLT1 (ENSOJAG00000018836)	PDZRN4 (ENSOJAG00000018862)	ENSOJAG00000018889	ENSOJAG00000018907	CNTN1 (ENSOJAG00000018970)	NRCAM (ENSOJAG00000019980)
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00950000182956.b.b.a.b	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01050000244888.b.b.a.a #10	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000170627	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.k.b	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a	ENSGT00940000154738.a.q
Japanese Medaka HdrR	MODERN SPECIES	20	ADCK2 (ENSORLG00000002597) #7	SRPK2 (ENSORLG00000002625) #8	ENSORLG00000030410	pus7 (ENSORLG00000002656) #9	zgc:172339 (ENSORLG00000002663)	aplnr2 (ENSORLG00000002666) #10	parvb (ENSORLG00000002715) #12	parvg (ENSORLG00000024447) #13	SHISAL1 (ENSORLG00000002726) #14	plxnb2b (ENSORLG00000002814) #15	ENSORLG00000023419 #16	ENSORLG00000002834 #16	appl2 (ENSORLG00000002887) #17	NUAK1 (ENSORLG00000027517) #19	ENSORLG00000002944 #20	szl (ENSORLG00000002964) #22	ENSORLG00000025454 #23	NELL2 (ENSORLG00000003018) #24	TMEM117 (ENSORLG00000003044) #25	twf1a (ENSORLG00000003106) #26	irak4 (ENSORLG00000003134) #27	ADAMTS20 (ENSORLG00000003194) #28	ENSORLG00000027602	prickle1a (ENSORLG00000003229)	PPHLN1 (ENSORLG00000003241)	YAF2 (ENSORLG00000003255)	ENSORLG00000023834	ENSORLG00000022854	ENSORLG00000026898	ENSORLG00000024063	ENSORLG00000025720
Chinese medaka	MODERN SPECIES	594																szl (ENSOSIG00000006933) #22	ENSOSIG00000006931 #23
Tiger tail seahorse	MODERN SPECIES	428	ENSHCOG00000005328	ENSHCOG00000005330 #8	pus7 (ENSHCOG00000005361) #9	aplnr2 (ENSHCOG00000005371) #10	hdac10 (ENSHCOG00000005375) #11	parvb (ENSHCOG00000005425) #12	parvg (ENSHCOG00000005444) #13	SHISAL1 (ENSHCOG00000005461) #14	SHISAL1 (ENSHCOG00000000178) #14	plxnb2b (ENSHCOG00000005561) #15	TUBGCP6 (ENSHCOG00000005574) #16	appl2 (ENSHCOG00000005613) #17	ENSHCOG00000005624	NUAK1 (ENSHCOG00000005640) #19	ENSHCOG00000005653 #20	szl (ENSHCOG00000005664) #22	NELL2 (ENSHCOG00000005694) #24	TMEM117 (ENSHCOG00000005711) #25	twf1a (ENSHCOG00000005729) #26	irak4 (ENSHCOG00000005758) #27	ENSHCOG00000005769	ENSHCOG00000005779 #28	ADAMTS20 (ENSHCOG00000005964) #28	ENSHCOG00000005993	prickle1a (ENSHCOG00000006016)	ENSHCOG00000006022	YAF2 (ENSHCOG00000006027)	GXYLT1 (ENSHCOG00000006039)	PDZRN4 (ENSHCOG00000006061)	CNTN1 (ENSHCOG00000006075)	ENSHCOG00000006088
Pinecone sodierfish	MODERN SPECIES	20	DENND2A (ENSMMDG00005012068)	ADCK2 (ENSMMDG00005012064) #7	ENSMMDG00005012060 #8	ENSMMDG00005012056 #8	pus7 (ENSMMDG00005011625) #9	zgc:172339 (ENSMMDG00005011601)	aplnr2 (ENSMMDG00005011600) #10	parvb (ENSMMDG00005011598) #12	parvg (ENSMMDG00005011595) #13	SHISAL1 (ENSMMDG00005011591) #14	plxnb2b (ENSMMDG00005008013) #15	TUBGCP6 (ENSMMDG00005007539) #16	appl2 (ENSMMDG00005002071) #17	NUAK1 (ENSMMDG00005001913) #19	ENSMMDG00005001867 #20	szl (ENSMMDG00005001809) #22	prl2 (ENSMMDG00005001759) #21	ENSMMDG00005001747 #23	NELL2 (ENSMMDG00005001742) #24	TMEM117 (ENSMMDG00005001729) #25	twf1a (ENSMMDG00005001693) #26	irak4 (ENSMMDG00005001094) #27	ADAMTS20 (ENSMMDG00005001076) #28	ENSMMDG00005001071	prickle1a (ENSMMDG00005001069)	PPHLN1 (ENSMMDG00005001065)	YAF2 (ENSMMDG00005001063)	GXYLT1 (ENSMMDG00005001060)	PDZRN4 (ENSMMDG00005001054)	CNTN1 (ENSMMDG00005001022)	NRCAM (ENSMMDG00005000496)
Cod	MODERN SPECIES	22	ENSGMOG00000004822 #7	ENSGMOG00000033097 #8	ENSGMOG00000004874 #9	ENSGMOG00000033081	ENSGMOG00000023538 #10	hdac10 (ENSGMOG00000004935) #11	parvb (ENSGMOG00000004975) #12	parvg (ENSGMOG00000004996) #13	SHISAL1 (ENSGMOG00000005022) #14	plxnb2b (ENSGMOG00000008910) #15	ENSGMOG00000008939 #16	appl2 (ENSGMOG00000008980) #17	ENSGMOG00000032711	ENSGMOG00000009000 #19	ENSGMOG00000009016 #20	ENSGMOG00000024340 #22	ENSGMOG00000032076 #23	TMEM117 (ENSGMOG00000009090) #25	ENSGMOG00000030565	twf1a (ENSGMOG00000009101) #26	irak4 (ENSGMOG00000009110) #27	ADAMTS20 (ENSGMOG00000009121) #28	ENSGMOG00000009177	ENSGMOG00000019794	PRICKLE1 (ENSGMOG00000000750)	YAF2 (ENSGMOG00000000765)	GXYLT1 (ENSGMOG00000000771)	PDZRN4 (ENSGMOG00000030299)	CNTN1 (ENSGMOG00000000812)	NRCAM (ENSGMOG00000000846)	ENSGMOG00000028053
Protacanthopterygii	ANCESTRAL SPECIES	42	ENSGT00950000182956.b.b.a.b	ENSGT00950000182931.B.a.a.g	ENSGT00390000001536 #7	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT01090000263055 #18	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT01020000230394.e.a.a.a.a.b ##15	ENSGT00940000157255.c.b ##19	ENSGT00950000182818.B.a ##21	ENSGT00810000125439.B.c.a ##24	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000161379	ENSGT00940000165046.a	ENSGT00940000163363	ENSGT00390000009663
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	196	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.a.b	ENSGT00950000182956.b.b.a.b.g	ENSGT00950000182931.B.a.a.g.a	ENSGT00940000154795.db #8	ENSGT00530000063554.a.d #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a.g #12	ENSGT00950000183194.b #13	ENSGT00390000006791.l.b #14	ENSGT01020000230394.e.a.a.a.a.a.e #15	ENSGT00940000157810 #16	ENSGT00940000158319.n #17	ENSGT01090000263055 #18	ENSGT00940000157255.c.a.c #19	ENSGT00940000165903 #20	ENSGT00940000164657.c #22	ENSGT01060000248946.b	ENSGT01060000252138	ENSGT00810000125439.B.c.b.c.a #24	ENSGT00390000013052.m #25	ENSGT01100000263537.b.a.b.f	ENSGT00530000063868.b.j.a.b #26	ENSGT00940000158792.k #27	ENSGT00940000158636.k.a #28	ENSGT00940000161379	ENSGT00940000165046.a.f	ENSGT00390000009663.l	ENSGT00940000167440	ENSGT00390000009899.a.d.n	ENSGT00940000156574.C.o.a	ENSGT00940000153377.B
Salmoninae_a	ANCESTRAL SPECIES	13	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.a.b	ENSGT00950000182956.b.b.a.b.g	ENSGT00950000182931.B.a.a.g.a	ENSGT00940000154795.db #8	ENSGT00530000063554.a.d #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a.g #12	ENSGT00950000183194.b #13	ENSGT00390000006791.l.b #14	ENSGT01020000230394.e.a.a.a.a.a.e #15	ENSGT00940000157810 #16	ENSGT00940000158319.n #17	ENSGT01090000263055 #18	ENSGT00940000157255.c.a.c #19	ENSGT00940000165903 #20	ENSGT00940000164657.c #22	ENSGT00950000183093.A.a.c #23	ENSGT00810000125439.B.c.b.c.a #24	ENSGT00390000013052.m #25	ENSGT01100000263537.b.a.b.f	ENSGT00530000063868.b.j.a.b #26	ENSGT00940000158792.k #27	ENSGT00940000158636.k.a #28	ENSGT00940000161379	ENSGT00940000165046.a.f	ENSGT00390000009663.l	ENSGT00940000167440	ENSGT00390000009899.a.d.n	ENSGT00940000156574.C.o.a	ENSGT00940000153377.B.a	ENSGT00940000154876.a.b.a
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00940000153377.C	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.a.b	ENSGT00950000182956.b.b.a.b.g	ENSGT00950000182931.B.a.a.g.a	ENSGT00940000154795.db #8	ENSGT00530000063554.a.d #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a.g #12	ENSGT00950000183194.b #13	ENSGT00390000006791.l.b #14	ENSGT01020000230394.e.a.a.a.a.a.e #15	ENSGT00940000157810 #16	ENSGT00940000158319.n #17	ENSGT00940000157255.c.a.c #19	ENSGT00940000165903 #20	ENSGT00940000164657.c #22	ENSGT00950000183093.A.a.c #23	ENSGT00810000125439.B.c.b.c.a #24	ENSGT00390000013052.m #25	ENSGT01100000263537.b.a.b.f.a.b	ENSGT00530000063868.b.j.a.b #26	ENSGT00940000158792.k #27	ENSGT00940000158636.k.a #28	ENSGT00940000161379	ENSGT00940000165046.a.f	ENSGT00390000009663.l	ENSGT00940000167440	ENSGT00390000009899.a.d.n	ENSGT00940000156574.C.o.a	ENSGT00940000153377.B.a	ENSGT00940000154876.a.b.a
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000022178	ENSOMYG00000022192	ENSOMYG00000022198	ENSOMYG00000022474	ENSOMYG00000023869 #8	ENSOMYG00000023973 #9	hdac10 (ENSOMYG00000024303) #11	parvb (ENSOMYG00000025485) #12	parvg (ENSOMYG00000025605) #13	SHISAL1 (ENSOMYG00000025624) #14	plxnb2b (ENSOMYG00000026122) #15	ENSOMYG00000028793 #16	appl2 (ENSOMYG00000029103) #17	ENSOMYG00000029287 #19	ENSOMYG00000029404	ENSOMYG00000075679 #22	ENSOMYG00000029451 #23	NELL2 (ENSOMYG00000030051) #24	TMEM117 (ENSOMYG00000030850) #25	ENSOMYG00000030862	twf1a (ENSOMYG00000030886) #26	irak4 (ENSOMYG00000030965) #27	ADAMTS20 (ENSOMYG00000031161) #28	ENSOMYG00000031321	zgc:110339 (ENSOMYG00000031331)	gal (ENSOMYG00000031338)	ENSOMYG00000070518	ENSOMYG00000031358	ppp6r3 (ENSOMYG00000031697)	lrp5 (ENSOMYG00000033413)	ENSOMYG00000037142
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00940000153377.C	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.a.b	ENSGT00950000182956.b.b.a.b.g	ENSGT00950000182931.B.a.a.g.a	ENSGT00940000154795.db.a #8	ENSGT00530000063554.a.d #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a.g #12	ENSGT00950000183194.b #13	ENSGT00390000006791.l.b #14	ENSGT01020000230394.e.a.a.a.a.a.e #15	ENSGT00940000157810 #16	ENSGT00940000158319.n #17	ENSGT00940000157255.c.a.c #19	ENSGT00940000165903 #20	ENSGT00940000164657.c #22	ENSGT00950000183093.A.a.c #23	ENSGT00810000125439.B.c.b.c.a #24	ENSGT00390000013052.m #25	ENSGT01100000263537.b.a.b.f.a.b	ENSGT00530000063868.b.j.a.b #26	ENSGT00940000158792.k #27	ENSGT01010000229777	ENSGT00940000158636.k.a #28	ENSGT00940000161379	ENSGT00940000163363	ENSGT00390000009663.l	ENSGT00940000167440	ENSGT00390000009899.a.d.n	ENSGT00940000156574.C.o.a	ENSGT00940000153377.B.a
Coho salmon	MODERN SPECIES	14	TEAD4 (ENSOKIG00005022312)	ENSOKIG00005022912	DENND2A (ENSOKIG00005022960)	ENSOKIG00005023568 #8	pus7 (ENSOKIG00005027750) #9	hdac10 (ENSOKIG00005027962) #11	parvb (ENSOKIG00005028953) #12	parvg (ENSOKIG00005029095) #13	SHISAL1 (ENSOKIG00005029106) #14	plxnb2b (ENSOKIG00005029188) #15	TUBGCP6 (ENSOKIG00005030695) #16	appl2 (ENSOKIG00005031489) #17	ENSOKIG00005031908	NUAK1 (ENSOKIG00005031918) #19	ENSOKIG00005031965 #20	szl (ENSOKIG00005032386) #22	ENSOKIG00005032408 #23	NELL2 (ENSOKIG00005032521) #24	TMEM117 (ENSOKIG00005035753) #25	ENSOKIG00005035842	twf1a (ENSOKIG00005035862) #26	irak4 (ENSOKIG00005035877) #27	ENSOKIG00005035940	ADAMTS20 (ENSOKIG00005036052) #28	ENSOKIG00005036974	ENSOKIG00005037033	gal (ENSOKIG00005037096)	ENSOKIG00005037107	ppp6r3 (ENSOKIG00005037193)	lrp5 (ENSOKIG00005038566)	ENSOKIG00005043979
Chinook salmon	MODERN SPECIES	10	BRSK2 (ENSOTSG00005020135) #37	ldha (ENSOTSG00005020538) #36	tsg101a (ENSOTSG00005020677) #35	ENSOTSG00005020979	ENSOTSG00005020982	ENSOTSG00005020983	MAGI2 (ENSOTSG00005020989)	ENSOTSG00005021105	ENSOTSG00005021110	tmem41aa (ENSOTSG00005021112)	ehhadh (ENSOTSG00005021117)	zgc:162707 (ENSOTSG00005021134)	NUAK1 (ENSOTSG00005021137) #19	ENSOTSG00005021138	ENSOTSG00005021140 #20	szl (ENSOTSG00005021141) #22	ENSOTSG00005021144 #23	ENSOTSG00005021146	NELL2 (ENSOTSG00005021158) #24	TMEM117 (ENSOTSG00005025488) #25	ENSOTSG00005025489	twf1a (ENSOTSG00005025490) #26	irak4 (ENSOTSG00005025491) #27	ENSOTSG00005025493	ADAMTS20 (ENSOTSG00005025519) #28	ENSOTSG00005026214	ENSOTSG00005026216	gal (ENSOTSG00005026218)	ENSOTSG00005026223	ppp6r3 (ENSOTSG00005026234)	lrp5 (ENSOTSG00005027040)
Salmo	ANCESTRAL SPECIES	36	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.a.b	ENSGT00950000182956.b.b.a.b.g	ENSGT00950000182931.B.a.a.g.a	ENSGT00940000154795.db #8	ENSGT00530000063554.a.d #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a.g #12	ENSGT00950000183194.b #13	ENSGT00390000006791.l.b #14	ENSGT01020000230394.e.a.a.a.a.a.e #15	ENSGT00940000157810 #16	ENSGT00940000158319.n #17	ENSGT01090000263055 #18	ENSGT00940000157255.c.a.c #19	ENSGT00940000165903 #20	ENSGT00940000164657.c #22	ENSGT01060000248946.b	ENSGT00950000183093.A.a.c #23	ENSGT00810000125439.B.c.b.c.a #24	ENSGT00390000013052.m #25	ENSGT00530000063868.b.j.a.b #26	ENSGT00940000158792.k #27	ENSGT00940000158636.k.a #28	ENSGT00940000161379	ENSGT00940000165046.a.f	ENSGT00390000009663.l	ENSGT00940000167440	ENSGT00390000009899.a.d.n	ENSGT00940000156574.C.o.a	ENSGT00940000153377.B.a	ENSGT00940000154876.a.b.a
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000094851	ENSSSAG00000009323	ENSSSAG00000009385	ENSSSAG00000010690	ENSSSAG00000015277 #8	ENSSSAG00000047246 #9	hdac10 (ENSSSAG00000047307) #11	parvb (ENSSSAG00000109384) #12	parvg (ENSSSAG00000047375) #13	SHISAL1 (ENSSSAG00000098953) #14	plxnb2b (ENSSSAG00000047582) #15	ENSSSAG00000055220 #16	appl2 (ENSSSAG00000055453) #17	ENSSSAG00000095243 #19	mov10l1 (ENSSSAG00000059236) #20	ENSSSAG00000059461 #22	ENSSSAG00000059498	ENSSSAG00000059575 #23	NELL2 (ENSSSAG00000059676) #24	TMEM117 (ENSSSAG00000063780) #25	twf1a (ENSSSAG00000062334) #26	irak4 (ENSSSAG00000062519) #27	ADAMTS20 (ENSSSAG00000062769) #28	ENSSSAG00000093384	ENSSSAG00000098032	ENSSSAG00000063755	zgc:110339 (ENSSSAG00000063764)	gal (ENSSSAG00000090276)	ENSSSAG00000063794	saps3 (ENSSSAG00000063838)	lrp5 (ENSSSAG00000064425)
River trout	MODERN SPECIES	37	DENND2A (ENSSTUG00000028584)	ENSSTUG00000028048 #8	pus7 (ENSSTUG00000027779) #9	hdac10 (ENSSTUG00000025839) #11	parvb (ENSSTUG00000025665) #12	parvg (ENSSTUG00000025644) #13	SHISAL1 (ENSSTUG00000025630) #14	ENSSTUG00000025625	plxnb2b (ENSSTUG00000025216) #15	TUBGCP6 (ENSSTUG00000024871) #16	appl2 (ENSSTUG00000022090) #17	ENSSTUG00000022019 #18	NUAK1 (ENSSTUG00000022005) #19	ENSSTUG00000021993	ENSSTUG00000021922 #20	szl (ENSSTUG00000021890) #22	ENSSTUG00000021868	ENSSTUG00000021860 #23	NELL2 (ENSSTUG00000020827) #24	TMEM117 (ENSSTUG00000020751) #25	twf1a (ENSSTUG00000020713) #26	irak4 (ENSSTUG00000020599) #27	ENSSTUG00000020586	ADAMTS20 (ENSSTUG00000019540) #28	ENSSTUG00000019456	zgc:110339 (ENSSTUG00000019432)	gal (ENSSTUG00000019424)	ENSSTUG00000019388	ppp6r3 (ENSSTUG00000018786)	lrp5 (ENSSTUG00000016009)	ENSSTUG00000015936
Huchen	MODERN SPECIES	675											plxnb2b (ENSHHUG00000026242) #15	TUBGCP6 (ENSHHUG00000026116) #16	appl2 (ENSHHUG00000025968) #17	NUAK1 (ENSHHUG00000025949) #19	ENSHHUG00000025929 #20	szl (ENSHHUG00000025925) #22	ENSHHUG00000025903	ENSHHUG00000025898	NELL2 (ENSHHUG00000025868) #24
Salmoninae	ANCESTRAL SPECIES	229	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.b	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a	ENSGT00940000164807.A.h.a.b.a.b	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.a.a	ENSGT00950000182956.b.b.a.b.h	ENSGT00950000182931.B.a.a.g.b	ENSGT00390000001536 #7	ENSGT00940000154795.eb #8	ENSGT00530000063554.a.c #9	ENSGT00950000183194.a.a.h #12	ENSGT00390000006791.l.a #14	ENSGT01020000230394.e.a.a.a.a.a.f #15	ENSGT00940000158319.m #17	ENSGT00940000157255.c.a.d #19	ENSGT00940000160150	ENSGT00940000164657.d #22	ENSGT00950000183093.A.a #23	ENSGT00390000008060.d	ENSGT00940000161721.f	ENSGT00910000144271.B.d	ENSGT00910000144271.A	ENSGT00940000162161.A.w	ENSGT00950000182925.C.a.b.f	ENSGT00390000002629.v	ENSGT00940000162487.t.b	ENSGT00950000183112.b.a.a.a.c	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d.cb.b.b	ENSGT00940000154716.hc	ENSGT01030000234534.B.a.a.a.a.a.a.a	ENSGT00940000159261.d.a.c
Salmoninae_a	ANCESTRAL SPECIES	9	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a.a.a	ENSGT00940000164807.A.h.a.b.a.b	ENSGT00940000157046.D.d	ENSGT00940000154446.b.b.a.a	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.a.a	ENSGT00950000182956.b.b.a.b.h	ENSGT00950000182931.B.a.a.g.b	ENSGT00390000001536 #7	ENSGT00940000154795.eb #8	ENSGT00530000063554.a.c #9	ENSGT00950000183194.a.a.h #12	ENSGT00390000006791.l.a #14	ENSGT01020000230394.e.a.a.a.a.a.f #15	ENSGT00940000158319.m #17	ENSGT00940000157255.c.a.d #19	ENSGT00940000164657.d #22	ENSGT00950000183093.A.a.d #23	ENSGT00390000008060.d	ENSGT00940000161721.f	ENSGT00910000144271.B.d	ENSGT00910000144271.A	ENSGT00940000162161.A.w	ENSGT00950000182925.C.a.b.f	ENSGT00390000002629.v	ENSGT00940000162487.t.b	ENSGT00950000183112.b.a.a.a.c	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d.cb.b.b	ENSGT00940000154716.hc	ENSGT01030000234534.B.a.a.a.a.a.a.a	ENSGT00940000159261.d.a.c
Oncorhynchus	ANCESTRAL SPECIES	51	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a.a.a	ENSGT00940000164807.A.h.a.b.a.b.b	ENSGT00940000157046.D.d	ENSGT00940000154446.b.b.a.a	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.a.a	ENSGT00950000182956.b.b.a.b.h	ENSGT00950000182931.B.a.a.g.b	ENSGT00390000001536 #7	ENSGT00940000154795.eb #8	ENSGT00530000063554.a.c #9	ENSGT00950000183194.a.a.h #12	ENSGT00390000006791.l.a #14	ENSGT01020000230394.e.a.a.a.a.a.f #15	ENSGT00940000158319.m #17	ENSGT00940000157255.c.a.d #19	ENSGT00940000164657.d #22	ENSGT00950000183093.A.a.d #23	ENSGT00390000008060.d	ENSGT00940000161721.f	ENSGT00910000144271.B.d	ENSGT00910000144271.A	ENSGT00940000162161.A.w	ENSGT00950000182925.C.a.b.f	ENSGT00390000002629.v	ENSGT00940000162487.t.b	ENSGT00950000183112.b.a.a.a.c	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d.cb.b.b	ENSGT00940000154716.hc.f	ENSGT01030000234534.B.a.a.a.a.a.a.a	ENSGT00940000159261.d.a.c
Oncorhynchus_a	ANCESTRAL SPECIES	36	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.b	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a.a.a	ENSGT00940000164807.A.h.a.b.a.b.b	ENSGT00940000157046.D.d	ENSGT00940000154446.b.b.a.a	ENSGT00950000182956.b.b.a.b.h	ENSGT00950000182931.B.a.a.g.b	ENSGT00390000001536 #7	ENSGT00940000154795.eb #8	ENSGT00530000063554.a.c #9	ENSGT00950000183194.a.a.h #12	ENSGT00390000006791.l.a #14	ENSGT01020000230394.e.a.a.a.a.a.f #15	ENSGT00940000158319.m #17	ENSGT00940000157255.c.a.d #19	ENSGT00940000164657.d #22	ENSGT00950000183093.A.a.d #23	ENSGT00390000008060.d	ENSGT00940000161721.f	ENSGT00910000144271.B.d	ENSGT00910000144271.A	ENSGT00940000162161.A.w	ENSGT00950000182925.C.a.b.f	ENSGT00390000002629.v.a	ENSGT00940000162487.t.b	ENSGT00950000183112.b.a.a.a.c	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d.cb.b.b	ENSGT00940000154716.hc.f	ENSGT01030000234534.B.a.a.a.a.a.a.a	ENSGT00940000159261.d.a.c
Coho salmon	MODERN SPECIES	1	ENSOKIG00005004078	ENSOKIG00005004083	ENSOKIG00005004101	DENND2A (ENSOKIG00005004158)	ADCK2 (ENSOKIG00005004195) #7	ENSOKIG00005004291 #8	PUS7 (ENSOKIG00005004486) #9	PARVB (ENSOKIG00005004610) #12	SHISAL1 (ENSOKIG00005004638) #14	plxnb2b (ENSOKIG00005004739) #15	ENSOKIG00005006483	ENSOKIG00005006488	ENSOKIG00005006497	APPL2 (ENSOKIG00005006659) #17	NUAK1 (ENSOKIG00005009964) #19	ENSOKIG00005009982 #22	ENSOKIG00005009993 #23	POLRMT (ENSOKIG00005010050)	fgf22 (ENSOKIG00005010308)	ENSOKIG00005010317	ENSOKIG00005010331	ENSOKIG00005010339	ENSOKIG00005010349	micos13 (ENSOKIG00005010356)	hsd11b1la (ENSOKIG00005010368)	rgmd (ENSOKIG00005010373)	ENSOKIG00005010381	celf5a (ENSOKIG00005010397)	ENSOKIG00005010423	ENSOKIG00005010427	rxfp3.2b (ENSOKIG00005010430)
Chinook salmon	MODERN SPECIES		ENSOTSG00005019810	ENSOTSG00005019811	ENSOTSG00005019812	ENSOTSG00005019813	ENSOTSG00005019817	ADCK2 (ENSOTSG00005019819) #7	ENSOTSG00005019820 #8	ENSOTSG00005019827	pus7 (ENSOTSG00005019836) #9	parvb (ENSOTSG00005019933) #12	SHISAL1 (ENSOTSG00005019936) #14	plxnb2b (ENSOTSG00005019942) #15	appl2 (ENSOTSG00005000188) #17	NUAK1 (ENSOTSG00005000203) #19	ENSOTSG00005000204	szl (ENSOTSG00005000206) #22	ENSOTSG00005000209 #23	POLRMT (ENSOTSG00005000217)	fgf22 (ENSOTSG00005000237)	ENSOTSG00005000238	ENSOTSG00005000239	ENSOTSG00005000240	ENSOTSG00005000241	micos13 (ENSOTSG00005000242)	hsd11b1la (ENSOTSG00005000244)	rgmd (ENSOTSG00005000245)	ENSOTSG00005000246	celf5a (ENSOTSG00005000247)	ENSOTSG00005000248	ENSOTSG00005000249	rxfp3.2b (ENSOTSG00005000250)
Rainbow trout	MODERN SPECIES	22	ENSOMYG00000013105	ENSOMYG00000013107	ENSOMYG00000013120	ENSOMYG00000064237	ENSOMYG00000013194	ENSOMYG00000013247 #7	ENSOMYG00000013281 #8	ENSOMYG00000013403 #9	ENSOMYG00000013741 #12	ENSOMYG00000013758 #14	ENSOMYG00000070442	ENSOMYG00000063507	ENSOMYG00000013809 #15	ENSOMYG00000014156 #17	ENSOMYG00000016260 #19	ENSOMYG00000016288 #22	ENSOMYG00000016295 #23	ENSOMYG00000016330	fgf22 (ENSOMYG00000016677)	ENSOMYG00000016686	ENSOMYG00000016702	ENSOMYG00000016711	ENSOMYG00000058826	ENSOMYG00000060310	micos13 (ENSOMYG00000016755)	hsd11b1la (ENSOMYG00000016728)	rgmd (ENSOMYG00000016763)	ENSOMYG00000016771	celf5a (ENSOMYG00000057546)	ENSOMYG00000076062	rxfp3.2b (ENSOMYG00000066614)
Salmo	ANCESTRAL SPECIES	20	ENSGT00390000003443.c	ENSGT00940000164807.A.h.a.b.a.b	ENSGT00940000157046.D.d.e.b	ENSGT00940000154446.b.b.a.a	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.a.a	ENSGT00950000182956.b.b.a.b.h	ENSGT00950000182931.B.a.a.g.b	ENSGT00390000001536 #7	ENSGT00940000154795.eb #8	ENSGT00530000063554.a.c #9	ENSGT00950000183194.a.a.h #12	ENSGT00390000006791.l.a #14	ENSGT01020000230394.e.a.a.a.a.a.f #15	ENSGT00940000158319.m #17	ENSGT00940000157255.c.a.d #19	ENSGT00940000164657.d #22	ENSGT00950000183093.A.a.d #23	ENSGT00390000008060.d	ENSGT00940000161721.f	ENSGT00910000144271.B.d	ENSGT00910000144271.A	ENSGT00940000162161.A.w	ENSGT00950000182925.C.a.b.f	ENSGT00390000002629.v	ENSGT00940000162487.t.b	ENSGT00940000177291	ENSGT00950000183112.b.a.a.a.c	ENSGT00940000154201.a.a.b.d.cb.b.b	ENSGT00940000154716.hc	ENSGT01030000234534.B.a.a.a.a.a.a.a	ENSGT00940000159261.d.a.c
River trout	MODERN SPECIES	33	ENSSTUG00000008086	ENSSTUG00000008080	ENSSTUG00000007978	DENND2A (ENSSTUG00000007450)	ADCK2 (ENSSTUG00000007424) #7	pus7 (ENSSTUG00000007405) #9	ENSSTUG00000006498 #8	pus7 (ENSSTUG00000005795) #9	ENSSTUG00000005717	parvb (ENSSTUG00000005704) #12	SHISAL1 (ENSSTUG00000005703) #14	ENSSTUG00000005687	plxnb2b (ENSSTUG00000002388) #15	appl2 (ENSSTUG00000001918) #17	NUAK1 (ENSSTUG00000001868) #19	szl (ENSSTUG00000001857) #22	ENSSTUG00000001851 #23	ENSSTUG00000009520	fgf22 (ENSSTUG00000009499)	ENSSTUG00000009493	ENSSTUG00000009486	ENSSTUG00000009474	ENSSTUG00000009467	micos13 (ENSSTUG00000009464)	hsd11b1la (ENSSTUG00000009458)	ENSSTUG00000009450	rgmd (ENSSTUG00000009445)	celf5a (ENSSTUG00000009429)	ENSSTUG00000009422	rxfp3.2b (ENSSTUG00000009419)	creb3l3a (ENSSTUG00000009397)
Atlantic salmon	MODERN SPECIES	15	ENSSSAG00000099929	ENSSSAG00000101931	ENSSSAG00000064421	dennd2a (ENSSSAG00000064258)	adck2 (ENSSSAG00000064244) #7	ENSSSAG00000064241	ENSSSAG00000054656 #8	ENSSSAG00000049736 #9	ENSSSAG00000112579	ENSSSAG00000049526 #12	ENSSSAG00000104798 #14	ENSSSAG00000041335 #15	ENSSSAG00000085980	ENSSSAG00000039790 #17	ENSSSAG00000110419 #19	ENSSSAG00000114354 #22	ENSSSAG00000039475 #23	ENSSSAG00000026725	fgf22 (ENSSSAG00000117038)	ENSSSAG00000025551	ENSSSAG00000025343	ENSSSAG00000025124	micos13 (ENSSSAG00000105399)	hsd11b1la (ENSSSAG00000020651)	ENSSSAG00000020311	rgmd (ENSSSAG00000020190)	celf5a (ENSSSAG00000019628)	creb3l3a (ENSSSAG00000018991)	ef2 (ENSSSAG00000017975)	hmg20b (ENSSSAG00000017779)	ENSSSAG00000010477
Huchen	MODERN SPECIES	746												PLXNB2 (ENSHHUG00000028713) #15	appl2 (ENSHHUG00000028541) #17	NUAK1 (ENSHHUG00000028535) #19	ENSHHUG00000028528	szl (ENSHHUG00000028525) #22	ENSHHUG00000028520	ENSHHUG00000028424	fgf22 (ENSHHUG00000028407)
Northern pike	MODERN SPECIES	18	ENSELUG00000032319	TEAD4 (ENSELUG00000008200)	DENND2A (ENSELUG00000008387)	ADCK2 (ENSELUG00000008460) #7	SRPK2 (ENSELUG00000008484) #8	pus7 (ENSELUG00000008521) #9	hdac10 (ENSELUG00000008585) #11	parvb (ENSELUG00000008670) #12	parvg (ENSELUG00000008751) #13	SHISAL1 (ENSELUG00000008795) #14	plxnb2b (ENSELUG00000008913) #15	TUBGCP6 (ENSELUG00000009015) #16	appl2 (ENSELUG00000009175) #17	NUAK1 (ENSELUG00000009225) #19	ENSELUG00000009263 #20	szl (ENSELUG00000009294) #22	ENSELUG00000009310 #23	NELL2 (ENSELUG00000009344) #24	ENSELUG00000029320	TMEM117 (ENSELUG00000009381) #25	twf1a (ENSELUG00000009405) #26	irak4 (ENSELUG00000009419) #27	ADAMTS20 (ENSELUG00000009675) #28	ENSELUG00000009746	zgc:110339 (ENSELUG00000009774)	gal (ENSELUG00000031732)	ENSELUG00000009910	ppp6r3 (ENSELUG00000010007)	lrp5 (ENSELUG00000010119)	ENSELUG00000025527	anpepb.1 (ENSELUG00000010173)
Otomorpha	ANCESTRAL SPECIES	150			ENSGT00980000203449	ENSGT00940000154795 #8	ENSGT00530000063554.a #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000177234	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00950000182818.B.d #21	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b.j	ENSGT00390000013052 #25	ENSGT01030000234621.E	ENSGT01020000230394.e.a.a.a.a.b ##15	ENSGT00940000157255.c.b ##19	ENSGT00950000182818.B.c #21	ENSGT00810000125439.B.c.a ##24	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b
Clupeiformes	ANCESTRAL SPECIES	139	ENSGT00940000154738.a.q	ENSGT00940000155419.c.a	ENSGT00940000155915.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000156242.c.a	ENSGT00530000063554.a #9	ENSGT00940000160061 #11	ENSGT00950000183194.a.a #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT01020000230394.e.a.a.a.a.a #15	ENSGT00940000157810 #16	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00950000182818.B.d #21	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b
Denticle herring	MODERN SPECIES	8	CNTN1 (ENSDCDG00000027377)	ENSDCDG00000027473	PDZRN4 (ENSDCDG00000027474)	GXYLT1 (ENSDCDG00000027476)	pus7 (ENSDCDG00000027483) #9	hdac10 (ENSDCDG00000027612) #11	ENSDCDG00000027700	parvg (ENSDCDG00000027702) #13	SHISAL1 (ENSDCDG00000027705) #14	plxnb2b (ENSDCDG00000027888) #15	ENSDCDG00000030441	TUBGCP6 (ENSDCDG00000030452) #16	appl2 (ENSDCDG00000030621) #17	NUAK1 (ENSDCDG00000030662) #19	MOV10L1 (ENSDCDG00000030664)	szl (ENSDCDG00000030670) #22	ENSDCDG00000030673 #23	ENSDCDG00000030676 #21	NELL2 (ENSDCDG00000030686) #24	TMEM117 (ENSDCDG00000030786) #25	twf1a (ENSDCDG00000030795) #26	irak4 (ENSDCDG00000030804) #27	ADAMTS20 (ENSDCDG00000030862) #28	prickle1a (ENSDCDG00000030980)	PPHLN1 (ENSDCDG00000030982)	ENSDCDG00000030990 #8	ADCK2 (ENSDCDG00000031225) #7	DENND2A (ENSDCDG00000031252)	TEAD4 (ENSDCDG00000031556)	ENSDCDG00000031646	mrps35 (ENSDCDG00000031647)
Atlantic herring	MODERN SPECIES	19	ENSCHAG00000000827	TDG (ENSCHAG00000000772)	tdg.1 (ENSCHAG00000000720)	ENSCHAG00000000624	ENSCHAG00000023203	samm50 (ENSCHAG00000023186)	si:dkey-10o6.2 (ENSCHAG00000023179)	LRTM2 (ENSCHAG00000023166)	CACNA2D4 (ENSCHAG00000022940)	plxnb2b (ENSCHAG00000021148) #15	TUBGCP6 (ENSCHAG00000020742) #16	appl2 (ENSCHAG00000020417) #17	ENSCHAG00000020384	NUAK1 (ENSCHAG00000020358) #19	ENSCHAG00000019923 #20	szl (ENSCHAG00000019850) #22	ENSCHAG00000019836 #23	ENSCHAG00000019830 #21	NELL2 (ENSCHAG00000019120) #24	TMEM117 (ENSCHAG00000019011) #25	twf1a (ENSCHAG00000018946) #26	irak4 (ENSCHAG00000018882) #27	ADAMTS20 (ENSCHAG00000018032) #28	prickle1a (ENSCHAG00000017976)	PPHLN1 (ENSCHAG00000017947)	frmd4a (ENSCHAG00000017925)	frmd4a (ENSCHAG00000017700)	prpf18 (ENSCHAG00000017573)	ENSCHAG00000017559	ENSCHAG00000017550	ENSCHAG00000017500
Otophysi	ANCESTRAL SPECIES	245															ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00950000182818.B.d #21	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b.j	ENSGT00390000013052 #25	ENSGT00530000063868.b.k #26	ENSGT01030000234621.E	ENSGT01020000230394.e.a.a.a.a.b ##15	ENSGT00940000180254	ENSGT00940000157255.c.b ##19	ENSGT00950000182818.B.c #21	ENSGT00810000125439.B.c.a ##24	ENSGT00530000063868.b.l #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28
Characiphysae	ANCESTRAL SPECIES	6	ENSGT00940000163982	ENSGT00730000111073	ENSGT00530000064873.b.e	ENSGT00940000153998.b	ENSGT00940000153883.a	ENSGT00390000013777	ENSGT00390000012069	ENSGT00940000165047	ENSGT00940000157760.g.b	ENSGT00530000063554.a #9	ENSGT00940000154795 #8	ENSGT00390000006548.a.b.b	ENSGT00940000155628	ENSGT00510000048252	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00950000182818.B.d #21	ENSGT00810000125439.B.c.b #24	ENSGT01100000263537.b.a.b.j	ENSGT00390000013052 #25	ENSGT00530000063868.b.l #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.l	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Channel catfish	MODERN SPECIES	5	ENSIPUG00000016122	ENSIPUG00000016095	prnprs3 (ENSIPUG00000016085)	Morc2a (ENSIPUG00000015886)	zgc:158398 (ENSIPUG00000015866)	thoc5 (ENSIPUG00000015790)	chid1 (ENSIPUG00000015692)	pddc1 (ENSIPUG00000015648)	cd151 (ENSIPUG00000015553)	pus7 (ENSIPUG00000015465) #9	srpk2 (ENSIPUG00000015342) #8	zgc:114188 (ENSIPUG00000015246)	ENSIPUG00000015141	pclaf (ENSIPUG00000015111)	mov10l1 (ENSIPUG00000015063) #20	szl (ENSIPUG00000015038) #22	ENSIPUG00000015026 #23	nell2 (ENSIPUG00000014934) #24	ENSIPUG00000014925	tmem117 (ENSIPUG00000014873) #25	twf1a (ENSIPUG00000014796) #26	irak4 (ENSIPUG00000014731) #27	adamts20 (ENSIPUG00000014644) #28	ENSIPUG00000014612	prickle1 (ENSIPUG00000014577)	yaf2 (ENSIPUG00000014560)	gxylt1 (ENSIPUG00000014524)	PDZRN4 (ENSIPUG00000014505)	CNTN1 (ENSIPUG00000014406)	nrcam (ENSIPUG00000013993)	pnpla8 (ENSIPUG00000013951)
Characiphysae_b	ANCESTRAL SPECIES	5	ENSGT00940000163982	ENSGT00730000111073	ENSGT00530000064873.b.e	ENSGT00940000153998.b	ENSGT00940000153883.a	ENSGT00390000013777	ENSGT00390000012069	ENSGT00940000165047	ENSGT00940000157760.g.b	ENSGT00530000063554.a #9	ENSGT00940000154795 #8	ENSGT00390000006548.a.b.b	ENSGT00940000155628	ENSGT00510000048252	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00950000182818.B.d #21	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01030000234621.E	ENSGT00530000063868.b.l #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.l	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Electric eel	MODERN SPECIES	47	hdhd5 (ENSEEEG00000019088)	ccdc77 (ENSEEEG00000019089)	prnprs3 (ENSEEEG00000019093)	morc2 (ENSEEEG00000019110)	zgc:158398 (ENSEEEG00000019389)	thoc5 (ENSEEEG00000019393)	chid1 (ENSEEEG00000019412)	gatd1 (ENSEEEG00000019415)	cd151 (ENSEEEG00000019420)	pus7 (ENSEEEG00000019428) #9	ENSEEEG00000019463 #8	zgc:114188 (ENSEEEG00000019592)	ENSEEEG00000019659	PCLAF (ENSEEEG00000019772)	ENSEEEG00000019773 #20	szl (ENSEEEG00000019774) #22	ENSEEEG00000019775 #23	NELL2 (ENSEEEG00000019776) #24	TMEM117 (ENSEEEG00000019786) #25	twf1a (ENSEEEG00000019788) #26	irak4 (ENSEEEG00000019799) #27	ADAMTS20 (ENSEEEG00000019807) #28	ENSEEEG00000019815	prickle1a (ENSEEEG00000019816)	YAF2 (ENSEEEG00000019819)	GXYLT1 (ENSEEEG00000019820)	PDZRN4 (ENSEEEG00000019821)	CNTN1 (ENSEEEG00000019822)	NRCAM (ENSEEEG00000019830)	ENSEEEG00000019914	ENSEEEG00000019916
Characoidei	ANCESTRAL SPECIES	4	ENSGT00940000163982	ENSGT00730000111073	ENSGT00530000064873.b.e	ENSGT00940000153998.b	ENSGT00940000153883.a	ENSGT00390000013777	ENSGT00390000012069	ENSGT00940000165047	ENSGT00940000157760.g.b	ENSGT00530000063554.a #9	ENSGT00940000154795 #8	ENSGT00390000006548.a.b.b	ENSGT00940000155628	ENSGT00510000048252	ENSGT00940000165903 #20	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00950000182818.B.d #21	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT01030000234621.E	ENSGT00530000063868.b.l #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b	ENSGT00390000013995.b.b.l	ENSGT00940000156242.c.a	ENSGT00950000183062.a.a.b.b.b	ENSGT00940000155915.a	ENSGT00940000155419.c.a
Red-bellied piranha	MODERN SPECIES	61	hdhd5 (ENSPNAG00000016754)	ccdc34 (ENSPNAG00000016798)	ccdc77 (ENSPNAG00000016888)	ENSPNAG00000016986	ENSPNAG00000016999	ENSPNAG00000017123	prnprs3 (ENSPNAG00000017148)	morc2 (ENSPNAG00000017170)	zgc:158398 (ENSPNAG00000017185)	thoc5 (ENSPNAG00000017294)	ENSPNAG00000017313	ENSPNAG00000017333 #8	zgc:114188 (ENSPNAG00000017372)	PCLAF (ENSPNAG00000017392)	MOV10L1 (ENSPNAG00000017463)	szl (ENSPNAG00000017488) #22	DBX2 (ENSPNAG00000017503) #23	ENSPNAG00000017545 #21	NELL2 (ENSPNAG00000003490) #24	ENSPNAG00000017718	TMEM117 (ENSPNAG00000017762) #25	twf1a (ENSPNAG00000017803) #26	irak4 (ENSPNAG00000017853) #27	ADAMTS20 (ENSPNAG00000018037) #28	prickle1a (ENSPNAG00000018061)	PPHLN1 (ENSPNAG00000018068)	YAF2 (ENSPNAG00000018088)	GXYLT1 (ENSPNAG00000018139)	PDZRN4 (ENSPNAG00000018179)	CNTN1 (ENSPNAG00000018336)	NRCAM (ENSPNAG00000018713)
Mexicana tetra	MODERN SPECIES	23	ENSAMXG00000036962	ENSAMXG00000014138	prnprs3 (ENSAMXG00000025658)	morc2 (ENSAMXG00000014169)	zgc:158398 (ENSAMXG00000014201)	thoc5 (ENSAMXG00000014235)	chid1 (ENSAMXG00000014277)	gatd1 (ENSAMXG00000038401)	cd151 (ENSAMXG00000014332)	pus7 (ENSAMXG00000014361) #9	ENSAMXG00000014407 #8	zgc:114188 (ENSAMXG00000014445)	CSNK1G1 (ENSAMXG00000032151)	ENSAMXG00000014470	ENSAMXG00000014490 #20	szl (ENSAMXG00000014533) #22	DBX2 (ENSAMXG00000033273) #23	ENSAMXG00000030223 #21	NELL2 (ENSAMXG00000014574) #24	TMEM117 (ENSAMXG00000032917) #25	ENSAMXG00000014603	twf1a (ENSAMXG00000014613) #26	irak4 (ENSAMXG00000039490) #27	ADAMTS20 (ENSAMXG00000014651) #28	prickle1a (ENSAMXG00000014705)	ENSAMXG00000014710	YAF2 (ENSAMXG00000035723)	GXYLT1 (ENSAMXG00000030102)	PDZRN4 (ENSAMXG00000036933)	CNTN1 (ENSAMXG00000014768)	ENSAMXG00000041099
Cyprinoidei	ANCESTRAL SPECIES	219																ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00810000125439.B.c.b #24	ENSGT00390000013052 #25	ENSGT00530000063868.b.l #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a	ENSGT00390000016228.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	758																ENSGT00940000164657.a #22	ENSGT00950000183093.A.a.b #23	ENSGT00810000125439.B.c.b.b #24	ENSGT00390000013052.k #25	ENSGT00530000063868.b.k #26	ENSGT00530000063868.b.l.c #26	ENSGT00940000158792 #27	ENSGT00940000158636 #28	ENSGT00940000157529.i.a.a	ENSGT00390000016228.a.b
Cyprininae_a	ANCESTRAL SPECIES	247	ENSGT00940000164138.a	ENSGT00400000022240.mc	ENSGT00940000157859.a.b	ENSGT01030000234534.B.a.b.a.a.a.a	ENSGT00390000017697.a.z	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000164099.a.b	ENSGT00390000008748.b.g.a.c	ENSGT00940000159572.a.b.c	ENSGT00940000154905.i.b.k	ENSGT00390000012715.e	ENSGT00950000183105.B.g	ENSGT00940000155943.b.a	ENSGT01050000244970.b.j.b.d	ENSGT00940000164657.a #22	ENSGT00950000183093.A.a.b #23	ENSGT00810000125439.B.c.b.b #24	ENSGT00390000013052.k #25	ENSGT00530000063868.b.k #26	ENSGT00940000158792 #27	ENSGT00940000158636.e #28	ENSGT00940000157529.i.a.a	ENSGT00950000183062.a.a.b.b.b.b	ENSGT00940000156242.c.a
Golden-line barbel	MODERN SPECIES	893										myo9ab (ENSSGRG00000050952)	ENSSGRG00000050949	rsl24d1 (ENSSGRG00000050938)	ENSSGRG00000050937	ENSSGRG00000050934	RFX7 (ENSSGRG00000050932)	szl (ENSSGRG00000050931) #22	ENSSGRG00000050930 #23	NELL2 (ENSSGRG00000050816) #24	TMEM117 (ENSSGRG00000050793) #25	ENSSGRG00000050790	TWF1 (ENSSGRG00000050789) #26
Common carp reference	MODERN SPECIES	37	ENSCCRG00000066089	CLN6 (ENSCCRG00000053784)	CALML4 (ENSCCRG00000046096)	ENSCCRG00000068531	ENSCCRG00000014197	spg11 (ENSCCRG00000014209)	ENSCCRG00000063986	ENSCCRG00000028913	znf609a (ENSCCRG00000053178)	ENSCCRG00000012661	myo9ab (ENSCCRG00000071588)	ENSCCRG00000067383	rsl24d1 (ENSCCRG00000058243)	ENSCCRG00000073461	ENSCCRG00000060276	szl (ENSCCRG00000029295) #22	DBX2 (ENSCCRG00000062319) #23	NELL2 (ENSCCRG00000070211) #24	ENSCCRG00000077248	TMEM117 (ENSCCRG00000081553) #25	TWF1 (ENSCCRG00000022348) #26	irak4 (ENSCCRG00000071606) #27	ADAMTS20 (ENSCCRG00000050164) #28	PRICKLE1 (ENSCCRG00000052041)	ENSCCRG00000065913	ENSCCRG00000009934	ENSCCRG00000072022	ENSCCRG00000066735	ENSCCRG00000034095	ENSCCRG00000054728	ENSCCRG00000067287
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	3192																szl (ENSCARG00000057044) #22
Goldfish	MODERN SPECIES	17	ITGA11 (ENSCARG00000016572)	ENSCARG00000016542	CLN6 (ENSCARG00000016536)	CALML4 (ENSCARG00000016524)	ENSCARG00000016517	spg11 (ENSCARG00000015818)	ENSCARG00000015438	ENSCARG00000015416	znf609a (ENSCARG00000015407)	ENSCARG00000015396	myo9ab (ENSCARG00000014599)	ENSCARG00000014550	ENSCARG00000014546	ENSCARG00000014491	RFX7 (ENSCARG00000014431)	szl (ENSCARG00000014419) #22	ENSCARG00000014411	ENSCARG00000014378 #23	NELL2 (ENSCARG00000013620) #24	twf1a (ENSCARG00000013571) #26	irak4 (ENSCARG00000013558) #27	PCLAF (ENSCARG00000013545)	ENSCARG00000013538	ENSCARG00000013533	ENSCARG00000013525	ENSCARG00000013516	ENSCARG00000013501	ENSCARG00000013493	ENSCARG00000013485	ENSCARG00000013476	F2R (ENSCARG00000013471)
Cyprininae	ANCESTRAL SPECIES	946														ENSGT00940000155943.b.b	ENSGT01050000244970.b.j.b.c	ENSGT00940000164657.b #22	ENSGT00950000183093.A.a.a.b #23	ENSGT00810000125439.B.c.b.a.a #24	ENSGT00390000013052.l #25
Cyprininae_a	ANCESTRAL SPECIES	714														ENSGT00940000155943.b.b	ENSGT01050000244970.b.j.b.c	ENSGT00940000164657.b #22	ENSGT00950000183093.A.a.a.b #23	ENSGT00810000125439.B.c.b.a.a #24	ENSGT00390000013052.l #25
Common carp reference	MODERN SPECIES	33					ENSCCRG00000064460	MON2 (ENSCCRG00000011645)	ppm1h (ENSCCRG00000031451)	avpr1aa (ENSCCRG00000031448)	ENSCCRG00000005508	ENSCCRG00000070009	ENSCCRG00000067505	ENSCCRG00000012672	ENSCCRG00000072972	ENSCCRG00000042745	ENSCCRG00000053942	szl (ENSCCRG00000031248) #22	DBX2 (ENSCCRG00000037418) #23	ENSCCRG00000041799 #24	TMEM117 (ENSCCRG00000040634) #25	ENSCCRG00000041773 #28	ENSCCRG00000052057	fbln1 (ENSCCRG00000052052)	ENSCCRG00000076840	WNT7B (ENSCCRG00000068707)	pparab (ENSCCRG00000060255)	yars2 (ENSCCRG00000052927)	cdkn1bb (ENSCCRG00000032611)	ENSCCRG00000060129	ENSCCRG00000045327	ENSCCRG00000038721	cib1 (ENSCCRG00000027669)
Golden-line barbel	MODERN SPECIES	1556														ENSSGRG00000012182	RFX7 (ENSSGRG00000012181)	szl (ENSSGRG00000012180) #22
Zebrafish	MODERN SPECIES	17	ciao2a (ENSDARG00000104940)	spg11 (ENSDARG00000045968)	ENSDARG00000101522	ENSDARG00000101455	znf609a (ENSDARG00000103388)	irak4 (ENSDARG00000100534) #27	twf1a (ENSDARG00000115712) #26	TMEM117 (ENSDARG00000088356) #25	NELL2 (ENSDARG00000090690) #24	myo9ab (ENSDARG00000073843)	ENSDARG00000092584	rsl24d1 (ENSDARG00000040439)	ENSDARG00000113543	ENSDARG00000040442	RFX7 (ENSDARG00000103691)	szl (ENSDARG00000099637) #22	ENSDARG00000099058	prickle1a (ENSDARG00000040649)	ENSDARG00000076111	ENSDARG00000100096	vwa5a (ENSDARG00000073905)	pus7 (ENSDARG00000031774) #9	ENSDARG00000110142 #8	ENSDARG00000112489	ENSDARG00000110485 #8	ENSDARG00000114874 #8	ENSDARG00000114901	RPS17 (ENSDARG00000046157)	ENSDARG00000097691	ENSDARG00000116725	ENSDARG00000015502
Osteoglossiformes	ANCESTRAL SPECIES	78	ENSGT00950000182956.b.b.a.b	ENSGT00950000182931.B.a.a.k	ENSGT00940000154795.ub #8	ENSGT00940000162446	ENSGT00940000162970	ENSGT00940000160061 #11	ENSGT00950000183194.a.a.i #12	ENSGT00950000183194.b #13	ENSGT00390000006791 #14	ENSGT00390000004237	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b	ENSGT01020000230394.e.a.a.a.b ##15	ENSGT00940000158319 #17	ENSGT00940000157255.c.a #19	ENSGT00940000164657 #22	ENSGT00950000183093.A.a #23	ENSGT00950000182818.B #21	ENSGT00810000125439.B.c.a.a ##24	ENSGT00390000013052 #25	ENSGT01100000263537.b.a.b	ENSGT00530000063868.b #26	ENSGT00940000158792 #27	ENSGT00530000063554.b ##9	ENSGT00940000158636.c #28	ENSGT00940000157529.h	ENSGT00730000111061	ENSGT00390000013995.b.b.l	ENSGT00940000156242.c.b	ENSGT00950000183062.a.a.b.b.a.a	ENSGT00940000155915.b
P. kingsleyae	MODERN SPECIES	44	DENND2A (ENSPKIG00000021835)	SRPK2 (ENSPKIG00000021935) #8	ENSPKIG00000022012	ENSPKIG00000022081	hdac10 (ENSPKIG00000022112) #11	parvb (ENSPKIG00000022188) #12	parvg (ENSPKIG00000022272) #13	SHISAL1 (ENSPKIG00000022343) #14	kcnj8 (ENSPKIG00000022366)	ENSPKIG00000022376	ENSPKIG00000022389	ENSPKIG00000022401 #15	PLXNB2 (ENSPKIG00000022462) ##15	appl2 (ENSPKIG00000022606) #17	NUAK1 (ENSPKIG00000022728) #19	szl (ENSPKIG00000022750) #22	DBX2 (ENSPKIG00000022766) #23	prl2 (ENSPKIG00000022777) #21	NELL2 (ENSPKIG00000022842) ##24	TMEM117 (ENSPKIG00000022930) #25	ENSPKIG00000022949	twf1b (ENSPKIG00000022975) #26	IRAK4 (ENSPKIG00000023007) #27	pus7l (ENSPKIG00000023027) ##9	ADAMTS20 (ENSPKIG00000023096) #28	ENSPKIG00000023183	irf5 (ENSPKIG00000023196)	tnpo3 (ENSPKIG00000023234)	CALU (ENSPKIG00000023282)	ENSPKIG00000023308	IMPDH1 (ENSPKIG00000023359)
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015026228	TEAD4 (ENSSFOG00015006612)	ENSSFOG00015006532	SRPK2 (ENSSFOG00015006488) #8	ENSSFOG00015006409	ENSSFOG00015006352	parvb (ENSSFOG00015006300) #12	parvg (ENSSFOG00015006274) #13	SHISAL1 (ENSSFOG00015027702) #14	ENSSFOG00015031487	kcnj8 (ENSSFOG00015030193)	abcc9 (ENSSFOG00015006097)	PLXNB2 (ENSSFOG00015006002) ##15	appl2 (ENSSFOG00015005927) #17	NUAK1 (ENSSFOG00015026223) #19	szl (ENSSFOG00015005882) #22	ENSSFOG00015024380 #23	prl2 (ENSSFOG00015005864) #21	NELL2 (ENSSFOG00015005776) ##24	TMEM117 (ENSSFOG00015005744) #25	twf1b (ENSSFOG00015005694) #26	ENSSFOG00015033023	IRAK4 (ENSSFOG00015005625) #27	pus7l (ENSSFOG00015005598) ##9	ADAMTS20 (ENSSFOG00015005220) #28	PRICKLE1 (ENSSFOG00015005176)	zcrb1 (ENSSFOG00015005150)	yaf2 (ENSSFOG00015005138)	gxylt1b (ENSSFOG00015005096)	pdzrn4 (ENSSFOG00015005067)	cntn1b (ENSSFOG00015004987)
Spotted gar	MODERN SPECIES	674	appl2 (ENSLOCG00000015456) #17	TUBGCP6 (ENSLOCG00000015459) #16	plxnb2b (ENSLOCG00000015461) #15	hcls1 (ENSLOCG00000015467)	ENSLOCG00000015469	guca1a (ENSLOCG00000015471)	RELN (ENSLOCG00000015474)	ENSLOCG00000015479	orc5 (ENSLOCG00000015480)	lhfpl3 (ENSLOCG00000015483)	ENSLOCG00000017899	KMT2E (ENSLOCG00000015484)	SRPK2 (ENSLOCG00000015487) #8	pus7 (ENSLOCG00000015489) #9	rint1 (ENSLOCG00000015491)	szl (ENSLOCG00000015495) #22	mapk12b (ENSLOCG00000015496)	selenoo1 (ENSLOCG00000015499)	trabd (ENSLOCG00000015501)	ENSLOCG00000017900	panx2 (ENSLOCG00000015503)	MOV10L1 (ENSLOCG00000015507)	mlc1 (ENSLOCG00000015509)	osgep (ENSLOCG00000015512)	apex1 (ENSLOCG00000015516)	ENSLOCG00000015517	cacna2d1a (ENSLOCG00000015521)	hgfa (ENSLOCG00000015530)	pax4 (ENSLOCG00000015535)	snd1 (ENSLOCG00000015537)	lrrc4.2 (ENSLOCG00000017901)