Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00940000164248	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000000062.x.b	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30
Primates	ANCESTRAL SPECIES	23	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00940000164248	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30
Strepsirrhini	ANCESTRAL SPECIES	45	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00940000164248	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00940000162725	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32
Lemuriformes	ANCESTRAL SPECIES	60	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00940000162725	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935.q.a #34	ENSGT00940000162167 #35	ENSGT00940000159444
Mouse lemur	MODERN SPECIES	169	TMEM187 (ENSMICG00000033392) #7	HCFC1 (ENSMICG00000016286) #8	RENBP (ENSMICG00000033869) #9	NAA10 (ENSMICG00000010278) #10	ARHGAP4 (ENSMICG00000016246) #11	AVPR2 (ENSMICG00000037091) #12	L1CAM (ENSMICG00000003486) #13	PDZD4 (ENSMICG00000027183) #14	SSR4 (ENSMICG00000003476) #15	IDH3G (ENSMICG00000003472) #16	SRPK3 (ENSMICG00000003464) #17	PLXNB3 (ENSMICG00000003449) #18	ABCD1 (ENSMICG00000003441) #19	BCAP31 (ENSMICG00000003437) #20	ENSMICG00000003428 #21	PNCK (ENSMICG00000013947) #22	DUSP9 (ENSMICG00000044469) #23	CCNQ (ENSMICG00000032354) #24	ATP2B3 (ENSMICG00000000010) #25	BGN (ENSMICG00000000009) #26	HAUS7 (ENSMICG00000000008) #27	TREX2 (ENSMICG00000038278) #28	ZFP92 (ENSMICG00000011893) #29	ENSMICG00000046759 #30	ENSMICG00000046490 #31	ZNF185 (ENSMICG00000005873) #32	NSDHL (ENSMICG00000005868) #33	ENSMICG00000005862 #34	GABRQ (ENSMICG00000047310) #35	ENSMICG00000013442 #36	ENSMICG00000012692 #37
Lemuriformes_a	ANCESTRAL SPECIES	110	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00940000162725
Coquerels sifaka	MODERN SPECIES	882	TMEM187 (ENSPCOG00000024026) #7	HCFC1 (ENSPCOG00000028065) #8	RENBP (ENSPCOG00000013414) #9	ENSPCOG00000027024 #10	ARHGAP4 (ENSPCOG00000009927) #11	AVPR2 (ENSPCOG00000008409) #12	L1CAM (ENSPCOG00000010437) #13	PDZD4 (ENSPCOG00000025180) #14	SSR4 (ENSPCOG00000028866) #15	IDH3G (ENSPCOG00000023374) #16	SRPK3 (ENSPCOG00000018569) #17	PLXNB3 (ENSPCOG00000024468) #18	ABCD1 (ENSPCOG00000016908) #19	BCAP31 (ENSPCOG00000017960) #20	ENSPCOG00000024763 #21	PNCK (ENSPCOG00000019463) #22	DUSP9 (ENSPCOG00000021779) #23	CCNQ (ENSPCOG00000020959) #24	ATP2B3 (ENSPCOG00000022001) #25	BGN (ENSPCOG00000018303) #26	HAUS7 (ENSPCOG00000016936) #27	TREX2 (ENSPCOG00000022646) #28	ENSPCOG00000018479	ENSPCOG00000025588 #30	ENSPCOG00000020542
Greater bamboo lemur	MODERN SPECIES	277														ENSPSMG00000010220	ENSPSMG00000010151 #21	PNCK (ENSPSMG00000010066) #22	DUSP9 (ENSPSMG00000010039) #23	ZFP92 (ENSPSMG00000010034) #29	TREX2 (ENSPSMG00000010030) #28	HAUS7 (ENSPSMG00000010024) #27	BGN (ENSPSMG00000009998) #26	ATP2B3 (ENSPSMG00000009254) #25	ARSJ (ENSPSMG00000008750)	CAMK2D (ENSPSMG00000007663)	ANK2 (ENSPSMG00000005110)	LARP7 (ENSPSMG00000003620)
Bushbaby	MODERN SPECIES	364	TMEM187 (ENSOGAG00000026922) #7	HCFC1 (ENSOGAG00000015100) #8	RENBP (ENSOGAG00000032778) #9	NAA10 (ENSOGAG00000013263) #10	ARHGAP4 (ENSOGAG00000015087) #11	AVPR2 (ENSOGAG00000030887) #12	L1CAM (ENSOGAG00000015077) #13	PDZD4 (ENSOGAG00000006741) #14	SSR4 (ENSOGAG00000006738) #15	ENSOGAG00000006735 #16	SRPK3 (ENSOGAG00000003138) #17	PLXNB3 (ENSOGAG00000003133) #18	ABCD1 (ENSOGAG00000027153) #19	BCAP31 (ENSOGAG00000006721) #20	ENSOGAG00000031270 #21	PNCK (ENSOGAG00000006718) #22	DUSP9 (ENSOGAG00000002412) #23	ENSOGAG00000033279 #24	ATP2B3 (ENSOGAG00000008921) #25	BGN (ENSOGAG00000008920) #26	ENSOGAG00000029324	HAUS7 (ENSOGAG00000008917) #27	TREX2 (ENSOGAG00000033175) #28	ZFP92 (ENSOGAG00000029963) #29	ENSOGAG00000031649	ENSOGAG00000032682	ENSOGAG00000030548 #30	ENSOGAG00000029555
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00940000164248	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32
Tarsier	MODERN SPECIES	2197												PLXNB3 (ENSTSYG00000032080) #18	ABCD1 (ENSTSYG00000028624) #19	BCAP31 (ENSTSYG00000003985) #20	ENSTSYG00000033997 #21	PNCK (ENSTSYG00000034891) #22	DUSP9 (ENSTSYG00000026755) #23	FAM58A (ENSTSYG00000026900) #24	ATP2B3 (ENSTSYG00000034877) #25	BGN (ENSTSYG00000030156) #26	HAUS7 (ENSTSYG00000030026) #27	ENSTSYG00000031978 #29	ENSTSYG00000036390 #30	ENSTSYG00000000195
Simiiformes	ANCESTRAL SPECIES	9	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00940000164248	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a	ENSGT00940000161880 #23	ENSGT00940000155445.e #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00940000164248	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT00940000165830
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000167437	ENSGT00940000157506 #13	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a	ENSGT00940000161880 #23	ENSGT00940000155445.e.a.b #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30
Hominidae	ANCESTRAL SPECIES	8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000167437	ENSGT00940000157506 #13	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a	ENSGT00940000161880 #23	ENSGT00940000155445.e.a.b #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000162921	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000167437.b	ENSGT00940000157506 #13	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a	ENSGT00940000161880 #23	ENSGT00940000155445.e.a.b #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00940000162725	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000167437.b	ENSGT00940000157506 #13	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a	ENSGT00940000161880 #23	ENSGT00940000155445.e.a.b #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00940000153582.b.a.a.b	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30
Pan	ANCESTRAL SPECIES	6	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000167437.b	ENSGT00940000157506 #13	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a	ENSGT00940000161880 #23	ENSGT00940000155445.e.a.b #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00940000162887 #29	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	259																ENSPTRG00000047427 #22	ENSPTRG00000048716	ENSPTRG00000045215 #23
Chimpanzee	MODERN SPECIES	972	RENBP (ENSPTRG00000022420) #9	NAA10 (ENSPTRG00000022419) #10	ARHGAP4 (ENSPTRG00000033931) #11	AVPR2 (ENSPTRG00000033849) #12	ENSPTRG00000039921	L1CAM (ENSPTRG00000022416) #13	ENSPTRG00000045057	PDZD4 (ENSPTRG00000022413) #14	SSR4 (ENSPTRG00000022412) #15	IDH3G (ENSPTRG00000024398) #16	SRPK3 (ENSPTRG00000022410) #17	PLXNB3 (ENSPTRG00000052414) #18	ABCD1 (ENSPTRG00000051738) #19	BCAP31 (ENSPTRG00000046838) #20	ENSPTRG00000050829 #21	PNCK (ENSPTRG00000022404) #22	ENSPTRG00000043668	ENSPTRG00000050474 #23	CCNQ (ENSPTRG00000043565) #24	ATP2B3 (ENSPTRG00000022399) #25	BGN (ENSPTRG00000022541) #26	HAUS7 (ENSPTRG00000022397) #27	ZFP92 (ENSPTRG00000047228) #29	ZNF275 (ENSPTRG00000022394)	PNMA6F (ENSPTRG00000049868) #30	MAGEA1 (ENSPTRG00000022386)	ENSPTRG00000044850 ##30	ENSPTRG00000048952 ##30	PNMA3 (ENSPTRG00000029325) ##30	PNMA5 (ENSPTRG00000028170) ##30	ZNF185 (ENSPTRG00000022391) #32
Bonobo	MODERN SPECIES	369	HCFC1 (ENSPPAG00000044057) #8	RENBP (ENSPPAG00000035978) #9	ENSPPAG00000037021 #10	ARHGAP4 (ENSPPAG00000039545) #11	AVPR2 (ENSPPAG00000034862) #12	L1CAM (ENSPPAG00000042079) #13	ENSPPAG00000001011	PDZD4 (ENSPPAG00000038351) #14	SSR4 (ENSPPAG00000041018) #15	IDH3G (ENSPPAG00000041999) #16	SRPK3 (ENSPPAG00000030197) #17	PLXNB3 (ENSPPAG00000029812) #18	ABCD1 (ENSPPAG00000038979) #19	BCAP31 (ENSPPAG00000033741) #20	SLC6A8 (ENSPPAG00000035106) #21	PNCK (ENSPPAG00000030824) #22	ENSPPAG00000029417	DUSP9 (ENSPPAG00000043656) #23	ENSPPAG00000027886 #24	ATP2B3 (ENSPPAG00000028306) #25	BGN (ENSPPAG00000033259) #26	HAUS7 (ENSPPAG00000034336) #27	ZFP92 (ENSPPAG00000027875) #29	ENSPPAG00000016764	ENSPPAG00000043033 #30	PNMA3 (ENSPPAG00000033493) ##30	PNMA5 (ENSPPAG00000009176) ##30	ZNF185 (ENSPPAG00000039048) #32	NSDHL (ENSPPAG00000039481) #33	CETN2 (ENSPPAG00000038780) #34	GABRQ (ENSPPAG00000032226) #35
Human	MODERN SPECIES	1827	TMEM187 (ENSG00000177854) #7	HCFC1 (ENSG00000172534) #8	RENBP (ENSG00000102032) #9	NAA10 (ENSG00000102030) #10	ARHGAP4 (ENSG00000089820) #11	AVPR2 (ENSG00000126895) #12	L1CAM (ENSG00000198910) #13	PDZD4 (ENSG00000067840) #14	SSR4 (ENSG00000180879) #15	IDH3G (ENSG00000067829) #16	SRPK3 (ENSG00000184343) #17	PLXNB3 (ENSG00000198753) #18	ABCD1 (ENSG00000101986) #19	BCAP31 (ENSG00000185825) #20	SLC6A8 (ENSG00000130821) #21	PNCK (ENSG00000130822) #22	DUSP9 (ENSG00000130829) #23	CCNQ (ENSG00000262919) #24	ATP2B3 (ENSG00000067842) #25	BGN (ENSG00000182492) #26	HAUS7 (ENSG00000213397) #27	TREX2 (ENSG00000183479) #28	ZFP92 (ENSG00000189420) #29	PNMA6E (ENSG00000214897) #30	ZNF275 (ENSG00000063587)	PNMA6F (ENSG00000225110) #30	PWWP4 (ENSG00000278803)	MAGEA1 (ENSG00000198681)	PNMA6A (ENSG00000235961) ##30	PNMA3 (ENSG00000183837) ##30	PNMA5 (ENSG00000198883) ##30
Gorilla	MODERN SPECIES	523	IRAK1 (ENSGGOG00000000220)	TMEM187 (ENSGGOG00000008146) #7	HCFC1 (ENSGGOG00000009800) #8	RENBP (ENSGGOG00000009791) #9	NAA10 (ENSGGOG00000009788) #10	ARHGAP4 (ENSGGOG00000009770) #11	AVPR2 (ENSGGOG00000027387) #12	PDZD4 (ENSGGOG00000007937) #14	SSR4 (ENSGGOG00000024329) #15	IDH3G (ENSGGOG00000023796) #16	SRPK3 (ENSGGOG00000036424) #17	PLXNB3 (ENSGGOG00000027723) #18	ABCD1 (ENSGGOG00000005561) #19	ENSGGOG00000005559 #20	ENSGGOG00000041742 ##21	PNCK (ENSGGOG00000005546) #22	ENSGGOG00000039596	DUSP9 (ENSGGOG00000015273) #23	ENSGGOG00000027073 #24	ATP2B3 (ENSGGOG00000007217) #25	BGN (ENSGGOG00000007211) #26	HAUS7 (ENSGGOG00000007959) #27	TREX2 (ENSGGOG00000036312) #28	ZFP92 (ENSGGOG00000039989) #29	ENSGGOG00000038628 #30	ENSGGOG00000010898	PNMA6F (ENSGGOG00000039046) #30	MAGEA1 (ENSGGOG00000010904)	ENSGGOG00000036462 ##30	ENSGGOG00000043525 ##30	PNMA3 (ENSGGOG00000034909) ##30
Orangutan	MODERN SPECIES	242	TMEM187 (ENSPPYG00000020864) #7	HCFC1 (ENSPPYG00000020863) #8	RENBP (ENSPPYG00000020862) #9	NAA10 (ENSPPYG00000020861) #10	ARHGAP4 (ENSPPYG00000020860) #11	ENSPPYG00000020859 #12	L1CAM (ENSPPYG00000020858) #13	ENSPPYG00000031511	PDZD4 (ENSPPYG00000020857) #14	SSR4 (ENSPPYG00000020856) #15	IDH3G (ENSPPYG00000020855) #16	SRPK3 (ENSPPYG00000020854) #17	ABCD1 (ENSPPYG00000020852) #19	BCAP31 (ENSPPYG00000020850) #20	SLC6A8 (ENSPPYG00000037616) #21	ENSPPYG00000020848 #22	ENSPPYG00000031169	DUSP9 (ENSPPYG00000020847) #23	CCNQ (ENSPPYG00000020846) #24	ATP2B3 (ENSPPYG00000020845) #25	BGN (ENSPPYG00000020844) #26	HAUS7 (ENSPPYG00000020843) #27	ENSPPYG00000020841 #29	ENSPPYG00000033472 #30	ZNF275 (ENSPPYG00000020839)	PNMA6F (ENSPPYG00000020840) #30	MAGEA1 (ENSPPYG00000020837)	PNMA6A (ENSPPYG00000020836) ##30	PNMA3 (ENSPPYG00000020835) ##30	PNMA5 (ENSPPYG00000032957) ##30	ZNF185 (ENSPPYG00000029371) #32
Gibbon	MODERN SPECIES	449	HCFC1 (ENSNLEG00000026624) #8	ENSNLEG00000013753 #9	NAA10 (ENSNLEG00000013724) #10	ARHGAP4 (ENSNLEG00000013678) #11	AVPR2 (ENSNLEG00000013671) #12	ENSNLEG00000031864	L1CAM (ENSNLEG00000013647) #13	ENSNLEG00000034251	PDZD4 (ENSNLEG00000013626) #14	SSR4 (ENSNLEG00000013602) #15	IDH3G (ENSNLEG00000013540) #16	ENSNLEG00000013518 #17	PLXNB3 (ENSNLEG00000013475) #18	ABCD1 (ENSNLEG00000013458) #19	BCAP31 (ENSNLEG00000013380) #20	PNCK (ENSNLEG00000013336) #22	ENSNLEG00000027939	DUSP9 (ENSNLEG00000013321) #23	CCNQ (ENSNLEG00000013298) #24	ATP2B3 (ENSNLEG00000032741) #25	BGN (ENSNLEG00000013250) #26	ENSNLEG00000031253 #27	ENSNLEG00000013237 #28	ZFP92 (ENSNLEG00000013228) #29	ENSNLEG00000027745 #30	ENSNLEG00000031614	ENSNLEG00000014065 ##30	PNMA3 (ENSNLEG00000018300) ##30	ZNF185 (ENSNLEG00000013907) #32	NSDHL (ENSNLEG00000013866) #33	CETN2 (ENSNLEG00000033913) #34
Cercopithecidae	ANCESTRAL SPECIES	19	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a	ENSGT00940000161880 #23	ENSGT00940000155445.e #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00940000164248	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT00940000165830
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a	ENSGT00940000161880 #23	ENSGT00940000155445.e #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00940000164248	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT00940000165830
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000161880 #23	ENSGT00940000155445.e #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000161880 #23	ENSGT00940000155445.e #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30
Olive baboon	MODERN SPECIES	792	NSDHL (ENSPANG00000001786) #33	ZNF185 (ENSPANG00000011355) #32	PNMA5 (ENSPANG00000041264) ##30	PNMA3 (ENSPANG00000008016) ##30	ENSPANG00000040158	PNMA6F (ENSPANG00000035246) #30	ENSPANG00000015246	ENSPANG00000035942 #30	ZFP92 (ENSPANG00000006612) #29	TREX2 (ENSPANG00000039672) #28	HAUS7 (ENSPANG00000014066) #27	BGN (ENSPANG00000022851) #26	ATP2B3 (ENSPANG00000014878) #25	BCAP31 (ENSPANG00000001625) #20	SLC6A8 (ENSPANG00000010089) #21	PNCK (ENSPANG00000013747) #22	DUSP9 (ENSPANG00000004029) #23	CCNQ (ENSPANG00000026424) #24	ABCD1 (ENSPANG00000025399) #19	PLXNB3 (ENSPANG00000008014) #18	SRPK3 (ENSPANG00000004220) #17	IDH3G (ENSPANG00000023323) #16	SSR4 (ENSPANG00000006591) #15	PDZD4 (ENSPANG00000000291) #14	L1CAM (ENSPANG00000013145) #13	AVPR2 (ENSPANG00000004382) #12	ARHGAP4 (ENSPANG00000010087) #11	NAA10 (ENSPANG00000014390) #10	RENBP (ENSPANG00000008961) #9	HCFC1 (ENSPANG00000024276) #8	TMEM187 (ENSPANG00000050796) #7
Cercopithecinae_d	ANCESTRAL SPECIES	141	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000161880 #23	ENSGT00940000155445.e #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30
Sooty mangabey	MODERN SPECIES	286	IRAK1 (ENSCATG00000044264)	HCFC1 (ENSCATG00000022004) #8	RENBP (ENSCATG00000037009) #9	NAA10 (ENSCATG00000038709) #10	ARHGAP4 (ENSCATG00000042499) #11	AVPR2 (ENSCATG00000036647) #12	L1CAM (ENSCATG00000041515) #13	PDZD4 (ENSCATG00000043997) #14	SSR4 (ENSCATG00000006344) #15	IDH3G (ENSCATG00000042112) #16	SRPK3 (ENSCATG00000045096) #17	PLXNB3 (ENSCATG00000037895) #18	ABCD1 (ENSCATG00000042536) #19	BCAP31 (ENSCATG00000043253) #20	SLC6A8 (ENSCATG00000001771) #21	PNCK (ENSCATG00000041955) #22	ENSCATG00000003729	DUSP9 (ENSCATG00000009164) #23	CCNQ (ENSCATG00000013187) #24	ENSCATG00000032628
Drill	MODERN SPECIES	1411	ENSMLEG00000009357	IRAK1 (ENSMLEG00000029062)	HCFC1 (ENSMLEG00000042451) #8	RENBP (ENSMLEG00000038487) #9	NAA10 (ENSMLEG00000032424) #10	ARHGAP4 (ENSMLEG00000038659) #11	AVPR2 (ENSMLEG00000042889) #12	L1CAM (ENSMLEG00000036326) #13	PDZD4 (ENSMLEG00000004595) #14	SSR4 (ENSMLEG00000016802) #15	IDH3G (ENSMLEG00000038908) #16	PLXNB3 (ENSMLEG00000032454) #18	ABCD1 (ENSMLEG00000041428) #19	BCAP31 (ENSMLEG00000042884) #20	SLC6A8 (ENSMLEG00000042530) #21	PNCK (ENSMLEG00000027716) #22	ENSMLEG00000027362	DUSP9 (ENSMLEG00000042559) #23	CCNQ (ENSMLEG00000039950) #24	ATP2B3 (ENSMLEG00000032665) #25	BGN (ENSMLEG00000029067) #26	HAUS7 (ENSMLEG00000038483) #27	ZFP92 (ENSMLEG00000013319) #29	PNMA6E (ENSMLEG00000041204) #30	ENSMLEG00000040255	PNMA6F (ENSMLEG00000035105) #30
Macaca	ANCESTRAL SPECIES	13	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a.c.b	ENSGT00940000161880 #23	ENSGT00940000155445.e #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT00940000165830	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30
Pig-tailed macaque	MODERN SPECIES	390	IRAK1 (ENSMNEG00000021597)	HCFC1 (ENSMNEG00000033780) #8	RENBP (ENSMNEG00000038526) #9	NAA10 (ENSMNEG00000034261) #10	ARHGAP4 (ENSMNEG00000039860) #11	AVPR2 (ENSMNEG00000029040) #12	L1CAM (ENSMNEG00000042796) #13	PDZD4 (ENSMNEG00000041450) #14	SSR4 (ENSMNEG00000042721) #15	IDH3G (ENSMNEG00000042620) #16	SRPK3 (ENSMNEG00000030566) #17	PLXNB3 (ENSMNEG00000032414) #18	ABCD1 (ENSMNEG00000033571) #19	BCAP31 (ENSMNEG00000028474) #20	SLC6A8 (ENSMNEG00000005457) #21	PNCK (ENSMNEG00000040586) #22	ENSMNEG00000028994	DUSP9 (ENSMNEG00000040094) #23	CCNQ (ENSMNEG00000042079) #24	ATP2B3 (ENSMNEG00000044784) #25	BGN (ENSMNEG00000042759) #26	HAUS7 (ENSMNEG00000036428) #27	ZFP92 (ENSMNEG00000042434) #29	PNMA6E (ENSMNEG00000038171) #30	ENSMNEG00000039113	PNMA6F (ENSMNEG00000031969) #30
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00940000160502	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445.e #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34
Crab-eating macaque	MODERN SPECIES	175	ENSMFAG00000049901	MECP2 (ENSMFAG00000033178)	IRAK1 (ENSMFAG00000042818)	HCFC1 (ENSMFAG00000035763) #8	RENBP (ENSMFAG00000044051) #9	NAA10 (ENSMFAG00000044161) #10	ARHGAP4 (ENSMFAG00000038733) #11	AVPR2 (ENSMFAG00000043716) #12	L1CAM (ENSMFAG00000030653) #13	PDZD4 (ENSMFAG00000031705) #14	SSR4 (ENSMFAG00000041921) #15	IDH3G (ENSMFAG00000036641) #16	SRPK3 (ENSMFAG00000035943) #17	BCAP31 (ENSMFAG00000039860) #20	SLC6A8 (ENSMFAG00000032070) #21	PNCK (ENSMFAG00000039202) #22	ENSMFAG00000065537	CCNQ (ENSMFAG00000044349) #24	BGN (ENSMFAG00000001443) #26	HAUS7 (ENSMFAG00000041248) #27	PNMA6E (ENSMFAG00000036391) #30	ENSMFAG00000049740	ENSMFAG00000034548	MAGEA1 (ENSMFAG00000000436)	ENSMFAG00000053528	ENSMFAG00000060170	PNMA3 (ENSMFAG00000043249) ##30	ENSMFAG00000049250	PNMA5 (ENSMFAG00000050915) ##30	ZNF185 (ENSMFAG00000036826) #32	NSDHL (ENSMFAG00000008105) #33
Rhesus	MODERN SPECIES	327	IRAK1 (ENSMMUG00000018703)	TMEM187 (ENSMMUG00000005132) #7	HCFC1 (ENSMMUG00000000319) #8	RENBP (ENSMMUG00000000320) #9	NAA10 (ENSMMUG00000000322) #10	ARHGAP4 (ENSMMUG00000000323) #11	AVPR2 (ENSMMUG00000064945) #12	L1CAM (ENSMMUG00000003379) #13	PDZD4 (ENSMMUG00000003377) #14	SSR4 (ENSMMUG00000003375) #15	IDH3G (ENSMMUG00000003374) #16	SRPK3 (ENSMMUG00000003372) #17	ABCD1 (ENSMMUG00000012746) #19	BCAP31 (ENSMMUG00000012744) #20	SLC6A8 (ENSMMUG00000012742) #21	PNCK (ENSMMUG00000010585) #22	DUSP9 (ENSMMUG00000056988) #23	CCNQ (ENSMMUG00000011480) #24	ATP2B3 (ENSMMUG00000011478) #25	BGN (ENSMMUG00000012743) #26	HAUS7 (ENSMMUG00000012739) #27	ZFP92 (ENSMMUG00000057937) #29	PNMA6E (ENSMMUG00000045255) #30	ENSMMUG00000013386	PNMA6F (ENSMMUG00000048764) #30	ENSMMUG00000053273	ENSMMUG00000063804	PNMA3 (ENSMMUG00000010897) ##30	PNMA5 (ENSMMUG00000018469) ##30	ZNF185 (ENSMMUG00000015264) #32	NSDHL (ENSMMUG00000013176) #33
Vervet Monkey	MODERN SPECIES	203	IRAK1 (ENSCSAG00000006804)	TMEM187 (ENSCSAG00000000523) #7	HCFC1 (ENSCSAG00000006809) #8	RENBP (ENSCSAG00000006814) #9	NAA10 (ENSCSAG00000006823) #10	ARHGAP4 (ENSCSAG00000006854) #11	AVPR2 (ENSCSAG00000006857) #12	L1CAM (ENSCSAG00000006864) #13	PDZD4 (ENSCSAG00000006871) #14	SSR4 (ENSCSAG00000006874) #15	IDH3G (ENSCSAG00000006879) #16	SRPK3 (ENSCSAG00000006884) #17	PLXNB3 (ENSCSAG00000006893) #18	BCAP31 (ENSCSAG00000006911) #20	SLC6A8 (ENSCSAG00000006918) #21	PNCK (ENSCSAG00000006923) #22	DUSP9 (ENSCSAG00000006926) #23	CCNQ (ENSCSAG00000006940) #24	ATP2B3 (ENSCSAG00000006948) #25	BGN (ENSCSAG00000006954) #26	ENSCSAG00000006955	HAUS7 (ENSCSAG00000006961) #27	ZFP92 (ENSCSAG00000006967) #29	ENSCSAG00000006968	ENSCSAG00000006975 #30	MAGEA1 (ENSCSAG00000000524)	PNMA3 (ENSCSAG00000000525) ##30	PNMA5 (ENSCSAG00000000526) ##30	ZNF185 (ENSCSAG00000006979) #32	NSDHL (ENSCSAG00000006982) #33	CETN2 (ENSCSAG00000006984) #34
Rhinopithecus	ANCESTRAL SPECIES	195	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00390000015797.c.a	ENSGT00940000161880 #23	ENSGT00940000155445.e #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30
Golden snub-nosed monkey	MODERN SPECIES	977		HCFC1 (ENSRROG00000004412) #8	RENBP (ENSRROG00000034139) #9	NAA10 (ENSRROG00000041881) #10	ARHGAP4 (ENSRROG00000045508) #11	AVPR2 (ENSRROG00000036522) #12	L1CAM (ENSRROG00000041494) #13	PDZD4 (ENSRROG00000042678) #14	SSR4 (ENSRROG00000035638) #15	IDH3G (ENSRROG00000044366) #16	SRPK3 (ENSRROG00000011319) #17	PLXNB3 (ENSRROG00000039660) #18	ABCD1 (ENSRROG00000037289) #19	BCAP31 (ENSRROG00000045725) #20	SLC6A8 (ENSRROG00000045113) #21	PNCK (ENSRROG00000044383) #22	ENSRROG00000039351	DUSP9 (ENSRROG00000037162) #23	CCNQ (ENSRROG00000038429) #24	ATP2B3 (ENSRROG00000043666) #25	BGN (ENSRROG00000042294) #26	HAUS7 (ENSRROG00000005507) #27	ZFP92 (ENSRROG00000031212) #29	ENSRROG00000028871 #30	ENSRROG00000033043
Black snub-nosed monkey	MODERN SPECIES	661	IRAK1 (ENSRBIG00000037074)	HCFC1 (ENSRBIG00000038921) #8	RENBP (ENSRBIG00000020101) #9	NAA10 (ENSRBIG00000040703) #10	ARHGAP4 (ENSRBIG00000031629) #11	ENSRBIG00000034619 #12	ENSRBIG00000032383 #12	L1CAM (ENSRBIG00000036638) #13	PDZD4 (ENSRBIG00000029436) #14	SSR4 (ENSRBIG00000015579) #15	IDH3G (ENSRBIG00000035445) #16	PLXNB3 (ENSRBIG00000026773) #18	ABCD1 (ENSRBIG00000044662) #19	BCAP31 (ENSRBIG00000043421) #20	SLC6A8 (ENSRBIG00000040899) #21	PNCK (ENSRBIG00000039714) #22	ENSRBIG00000028856	DUSP9 (ENSRBIG00000031725) #23	CCNQ (ENSRBIG00000034283) #24	ATP2B3 (ENSRBIG00000030237) #25	BGN (ENSRBIG00000043894) #26	HAUS7 (ENSRBIG00000038209) #27	ZFP92 (ENSRBIG00000027712) #29	PNMA6E (ENSRBIG00000025010) #30	ENSRBIG00000041318	PNMA6F (ENSRBIG00000030196) #30
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a.f #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445.c #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32
Mas night monkey	MODERN SPECIES	1312	IRAK1 (ENSANAG00000030752)	HCFC1 (ENSANAG00000030898) #8	RENBP (ENSANAG00000034421) #9	NAA10 (ENSANAG00000019745) #10	ARHGAP4 (ENSANAG00000023680) #11	AVPR2 (ENSANAG00000022496) #12	L1CAM (ENSANAG00000035752) #13	PDZD4 (ENSANAG00000026191) #14	SSR4 (ENSANAG00000035059) #15	ENSANAG00000024077 #16	SRPK3 (ENSANAG00000037077) #17	PLXNB3 (ENSANAG00000036384) #18	ABCD1 (ENSANAG00000035583) #19	BCAP31 (ENSANAG00000035222) #20	ENSANAG00000037607 #21	PNCK (ENSANAG00000010774) #22	DUSP9 (ENSANAG00000019919) #23	ENSANAG00000000457 #24	ATP2B3 (ENSANAG00000032972) #25	BGN (ENSANAG00000033529) #26	HAUS7 (ENSANAG00000022685) #27	ZFP92 (ENSANAG00000038344) #29	ENSANAG00000022983 #30	ZNF275 (ENSANAG00000025581)	PNMA6F (ENSANAG00000025537) #30
Cebidae	ANCESTRAL SPECIES	27	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a.f #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445.c #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00390000001700.a.b.b	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32
Marmoset	MODERN SPECIES	78	IRAK1 (ENSCJAG00000014452)	RENBP (ENSCJAG00000014500) #9	NAA10 (ENSCJAG00000014506) #10	AVPR2 (ENSCJAG00000011022) #12	ARHGAP4 (ENSCJAG00000011008) #11	L1CAM (ENSCJAG00000011023) #13	ENSCJAG00000022809	ENSCJAG00000074256	SSR4 (ENSCJAG00000011167) #15	PDZD4 (ENSCJAG00000011185) #14	SRPK3 (ENSCJAG00000011233) #17	PLXNB3 (ENSCJAG00000011267) #18	ABCD1 (ENSCJAG00000011337) #19	BCAP31 (ENSCJAG00000011348) #20	ENSCJAG00000011356 #21	ENSCJAG00000081213 #22	DUSP9 (ENSCJAG00000047408) #23	ENSCJAG00000011407 #24	ATP2B3 (ENSCJAG00000011413) #25	BGN (ENSCJAG00000011493) #26	HAUS7 (ENSCJAG00000036194) #27	TREX2 (ENSCJAG00000011515) #28	ZFP92 (ENSCJAG00000011538) #29	PNMA6E (ENSCJAG00000048415) #30	ENSCJAG00000019468	PNMA6F (ENSCJAG00000042286) #30	PWWP4 (ENSCJAG00000052872)	PNMA3 (ENSCJAG00000022542) ##30	PNMA5 (ENSCJAG00000016373) ##30	ZNF185 (ENSCJAG00000016363) #32	NSDHL (ENSCJAG00000016347) #33
Cebidae_a	ANCESTRAL SPECIES	78	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a.f #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445.c #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d #30	ENSGT00940000162921	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.c #30	ENSGT00940000162725
Capuchin	MODERN SPECIES	597	ENSCCAG00000020001	IRAK1 (ENSCCAG00000023583)	HCFC1 (ENSCCAG00000021425) #8	RENBP (ENSCCAG00000037940) #9	ENSCCAG00000033959 #10	ARHGAP4 (ENSCCAG00000025262) #11	AVPR2 (ENSCCAG00000028592) #12	L1CAM (ENSCCAG00000032233) #13	PDZD4 (ENSCCAG00000022158) #14	SSR4 (ENSCCAG00000020454) #15	SRPK3 (ENSCCAG00000021599) #17	PLXNB3 (ENSCCAG00000024352) #18	ABCD1 (ENSCCAG00000019717) #19	BCAP31 (ENSCCAG00000033187) #20	SLC6A8 (ENSCCAG00000035546) #21	PNCK (ENSCCAG00000021403) #22	ENSCCAG00000023569	DUSP9 (ENSCCAG00000033198) #23	CCNQ (ENSCCAG00000029897) #24	ATP2B3 (ENSCCAG00000027100) #25	BGN (ENSCCAG00000018493) #26	HAUS7 (ENSCCAG00000030265) #27	ZFP92 (ENSCCAG00000034129) #29	ENSCCAG00000030112 #30	ENSCCAG00000020739	ENSCCAG00000024093 #30
Bolivian squirrel monkey	MODERN SPECIES	236	IRAK1 (ENSSBOG00000018599)	HCFC1 (ENSSBOG00000034222) #8	RENBP (ENSSBOG00000034728) #9	ENSSBOG00000020071 #10	ARHGAP4 (ENSSBOG00000023946) #11	AVPR2 (ENSSBOG00000031595) #12	L1CAM (ENSSBOG00000033301) #13	PDZD4 (ENSSBOG00000033217) #14	SSR4 (ENSSBOG00000022316) #15	IDH3G (ENSSBOG00000019899) #16	SRPK3 (ENSSBOG00000024085) #17	PLXNB3 (ENSSBOG00000025081) #18	ABCD1 (ENSSBOG00000024968) #19	ENSSBOG00000028295 #20	ENSSBOG00000033535 #21	PNCK (ENSSBOG00000031039) #22	DUSP9 (ENSSBOG00000001225) #23	ENSSBOG00000029871 #24	ATP2B3 (ENSSBOG00000032052) #25	BGN (ENSSBOG00000029980) #26	HAUS7 (ENSSBOG00000028472) #27	ZFP92 (ENSSBOG00000028775) #29	ENSSBOG00000030661 #30	ENSSBOG00000027546	PNMA6F (ENSSBOG00000015383) #30
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33
Glires	ANCESTRAL SPECIES	10	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33
Lagomorpha	ANCESTRAL SPECIES	103	ENSGT00940000160502	ENSGT00390000011272 #7	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28
Rabbit	MODERN SPECIES	549	IRAK1 (ENSOCUG00000025860)	TMEM187 (ENSOCUG00000001116) #7	HCFC1 (ENSOCUG00000001113) #8	RENBP (ENSOCUG00000025840) #9	NAA10 (ENSOCUG00000001111) #10	ARHGAP4 (ENSOCUG00000001107) #11	AVPR2 (ENSOCUG00000015695) #12	L1CAM (ENSOCUG00000001102) #13	PDZD4 (ENSOCUG00000017200) #14	ENSOCUG00000026260 #21	SSR4 (ENSOCUG00000027360) #15	IDH3G (ENSOCUG00000016554) #16	ABCD1 (ENSOCUG00000017922) #19	PLXNB3 (ENSOCUG00000016506) #18	BCAP31 (ENSOCUG00000017921) #20	PNCK (ENSOCUG00000002399) #22	DUSP9 (ENSOCUG00000021158) #23	CCNQ (ENSOCUG00000002393) #24	ATP2B3 (ENSOCUG00000029623) #25	BGN (ENSOCUG00000023931) #26	ENSOCUG00000002376 #27	TREX2 (ENSOCUG00000025054) #28
Rodentia	ANCESTRAL SPECIES	10	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35
Kangaroo rat	MODERN SPECIES	526	Irak1 (ENSDORG00000013876)	Hcfc1 (ENSDORG00000002756) #8	Renbp (ENSDORG00000002755) #9	Naa10 (ENSDORG00000002753) #10	Arhgap4 (ENSDORG00000002750) #11	Avpr2 (ENSDORG00000002747) #12	L1cam (ENSDORG00000014093) #13	Pdzd4 (ENSDORG00000028112) #14	Ssr4 (ENSDORG00000006030) #15	Idh3g (ENSDORG00000006029) #16	Srpk3 (ENSDORG00000006026) #17	Plxnb3 (ENSDORG00000006024) #18	Abcd1 (ENSDORG00000006023) #19	Bcap31 (ENSDORG00000006022) #20	Slc6a8 (ENSDORG00000001174) #21	Pnck (ENSDORG00000014186) #22	Dusp9 (ENSDORG00000024222) #23	ENSDORG00000012846 #24	Atp2b3 (ENSDORG00000013038) #25	ENSDORG00000001237 #26	Haus7 (ENSDORG00000001235) #27	Trex2 (ENSDORG00000023727) #28	Zfp92 (ENSDORG00000001936) #29	ENSDORG00000029018 #30
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35	ENSGT00940000159444
Muroidea	ANCESTRAL SPECIES	13	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35	ENSGT00940000159444
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35	ENSGT00940000159444
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35	ENSGT00940000159444	ENSGT00940000154972.eb.a	ENSGT00940000161201	ENSGT00940000155374
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v.i #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35	ENSGT00940000159444	ENSGT00940000154972.eb.a
Prairie vole	MODERN SPECIES	212		Hcfc1 (ENSMOCG00000018390) #8	Renbp (ENSMOCG00000021137) #9	Naa10 (ENSMOCG00000011968) #10	Arhgap4 (ENSMOCG00000010795) #11	Avpr2 (ENSMOCG00000012257) #12	L1cam (ENSMOCG00000018901) #13	Pdzd4 (ENSMOCG00000013342) #14	Ssr4 (ENSMOCG00000000481) #15	Idh3g (ENSMOCG00000013265) #16	Srpk3 (ENSMOCG00000000270) #17	Plxnb3 (ENSMOCG00000016754) #18	Abcd1 (ENSMOCG00000020381) #19	Bcap31 (ENSMOCG00000011355) #20	Slc6a8 (ENSMOCG00000013922) #21	Pnck (ENSMOCG00000005305) #22	Dusp9 (ENSMOCG00000014149) #23	Atp2b3 (ENSMOCG00000016837) #25	Bgn (ENSMOCG00000005439) #26	ENSMOCG00000016829 #27	Trex2 (ENSMOCG00000001305) #28	Zfp92 (ENSMOCG00000015417) #29	Gm18336 (ENSMOCG00000000683) #30	ENSMOCG00000008885
Northern American deer mouse	MODERN SPECIES	475	ENSPEMG00000025112	Irak1 (ENSPEMG00000001469)	Hcfc1 (ENSPEMG00000011837) #8	ENSPEMG00000010870 #9	Arhgap4 (ENSPEMG00000019112) #11	Avpr2 (ENSPEMG00000008325) #12	L1cam (ENSPEMG00000011592) #13	Pdzd4 (ENSPEMG00000008494) #14	Ssr4 (ENSPEMG00000008760) #15	Idh3g (ENSPEMG00000011232) #16	Srpk3 (ENSPEMG00000012149) #17	Plxnb3 (ENSPEMG00000019022) #18	Abcd1 (ENSPEMG00000010748) #19	Bcap31 (ENSPEMG00000018100) #20	ENSPEMG00000001387 #21	Pnck (ENSPEMG00000018929) #22	Dusp9 (ENSPEMG00000009249) #23	Atp2b3 (ENSPEMG00000001607) #25	Bgn (ENSPEMG00000017164) #26	Haus7 (ENSPEMG00000011467) #27	Trex2 (ENSPEMG00000004918) #28	Zfp92 (ENSPEMG00000029357) #29	ENSPEMG00000002119 #30	Zfp275 (ENSPEMG00000028598)	ENSPEMG00000014112 #30	ENSPEMG00000029415 ##30	Pnma5 (ENSPEMG00000029060) ##30	Zfp185 (ENSPEMG00000001172) #32	ENSPEMG00000016866	Nsdhl (ENSPEMG00000028251) #33	Cetn2 (ENSPEMG00000009693) #34
Cricetinae	ANCESTRAL SPECIES	46	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00940000154488.B	ENSGT00940000163020	ENSGT00390000016992	ENSGT00390000000062.x.b.k.b
Golden Hamster	MODERN SPECIES	857	Mecp2 (ENSMAUG00000018195)	Irak1 (ENSMAUG00000002430)	Hcfc1 (ENSMAUG00000018495) #8	Naa10 (ENSMAUG00000019021) #10	Arhgap4 (ENSMAUG00000020011) #11	Avpr2 (ENSMAUG00000001098) #12	L1cam (ENSMAUG00000008575) #13	Pdzd4 (ENSMAUG00000000466) #14	ENSMAUG00000015090 #15	Idh3g (ENSMAUG00000000657) #16	Srpk3 (ENSMAUG00000009935) #17	Plxnb3 (ENSMAUG00000005458) #18	Abcd1 (ENSMAUG00000020103) #19	Bcap31 (ENSMAUG00000009135) #20	Slc6a8 (ENSMAUG00000017007) #21	Pnck (ENSMAUG00000017486) #22	Dusp9 (ENSMAUG00000020993) #23	Atp2b3 (ENSMAUG00000009992) #25	Bgn (ENSMAUG00000020050) #26	Haus7 (ENSMAUG00000020073) #27	Trex2 (ENSMAUG00000006617) #28	Zfp92 (ENSMAUG00000006204) #29	Gm18336 (ENSMAUG00000017654) #30	ENSMAUG00000019268
Chinese hamster chok1gshd	MODERN SPECIES	16	ENSCGRG00001022957	Irak1 (ENSCGRG00001013928)	Hcfc1 (ENSCGRG00001019535) #8	Naa10 (ENSCGRG00001012595) #10	Arhgap4 (ENSCGRG00001023232) #11	Avpr2 (ENSCGRG00001010799) #12	L1cam (ENSCGRG00001020541) #13	Pdzd4 (ENSCGRG00001012732) #14	Ssr4 (ENSCGRG00001019369) #15	Idh3g (ENSCGRG00001012756) #16	Srpk3 (ENSCGRG00001005920) #17	Plxnb3 (ENSCGRG00001024658) #18	Abcd1 (ENSCGRG00001017773) #19	ENSCGRG00001022627 #20	Slc6a8 (ENSCGRG00001013941) #21	Pnck (ENSCGRG00001015654) #22	Dusp9 (ENSCGRG00001015656) #23	Atp2b3 (ENSCGRG00001013946) #25	Bgn (ENSCGRG00001004273) #26	Haus7 (ENSCGRG00001014259) #27	Trex2 (ENSCGRG00001012110) #28	Zfp92 (ENSCGRG00001024615) #29	Gm18336 (ENSCGRG00001009753) #30	ENSCGRG00001020684	Gm45015 (ENSCGRG00001000704) #30	ENSCGRG00001011071	F8a (ENSCGRG00001010823)	ENSCGRG00001023020	ENSCGRG00001005230	ENSCGRG00001024731	Zfp185 (ENSCGRG00001021834) #32
Murinae	ANCESTRAL SPECIES	14	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000000062.x.b.k.a	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35
Mus	ANCESTRAL SPECIES	9	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000000062.x.b.k.a	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000000062.x.b.k.a	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35
Mus_B	ANCESTRAL SPECIES	14	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT00390000000062.x.b.k.a	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35	ENSGT00940000159444
Steppe mouse	MODERN SPECIES	888																Pnck (ENSMSIG00000007142) #22
spretus	MODERN SPECIES	19	Irak1 (MGP_SPRETEiJ_G0034324)	Hcfc1 (MGP_SPRETEiJ_G0034323) #8	Renbp (MGP_SPRETEiJ_G0034322) #9	Naa10 (MGP_SPRETEiJ_G0034321) #10	Avpr2 (MGP_SPRETEiJ_G0034320) #12	Arhgap4 (MGP_SPRETEiJ_G0034319) #11	L1cam (MGP_SPRETEiJ_G0034318) #13	Pdzd4 (MGP_SPRETEiJ_G0034317) #14	Ssr4 (MGP_SPRETEiJ_G0034316) #15	Idh3g (MGP_SPRETEiJ_G0034315) #16	Srpk3 (MGP_SPRETEiJ_G0034314) #17	Plxnb3 (MGP_SPRETEiJ_G0034313) #18	Abcd1 (MGP_SPRETEiJ_G0034312) #19	Bcap31 (MGP_SPRETEiJ_G0034311) #20	Slc6a8 (MGP_SPRETEiJ_G0034310) #21	Pnck (MGP_SPRETEiJ_G0034309) #22	Dusp9 (MGP_SPRETEiJ_G0034308) #23	Atp2b3 (MGP_SPRETEiJ_G0034307) #25	Bgn (MGP_SPRETEiJ_G0034306) #26	Haus7 (MGP_SPRETEiJ_G0034305) #27	Trex2 (MGP_SPRETEiJ_G0034304) #28	Zfp92 (MGP_SPRETEiJ_G0034303) #29	Zfp275 (MGP_SPRETEiJ_G0034302)	F8a (MGP_SPRETEiJ_G0034301)	Pnma3 (MGP_SPRETEiJ_G0034300) ##30	Pnma5 (MGP_SPRETEiJ_G0034299) ##30	Zfp185 (MGP_SPRETEiJ_G0034298) #32	Nsdhl (MGP_SPRETEiJ_G0034297) #33	Cetn2 (MGP_SPRETEiJ_G0034296) #34	Gabrq (MGP_SPRETEiJ_G0034295) #35	Gabra3 (MGP_SPRETEiJ_G0034294)
Mouse	MODERN SPECIES	37	Irak1 (ENSMUSG00000031392)	Hcfc1 (ENSMUSG00000031386) #8	Renbp (ENSMUSG00000031387) #9	Naa10 (ENSMUSG00000031388) #10	Avpr2 (ENSMUSG00000031390) #12	Arhgap4 (ENSMUSG00000031389) #11	L1cam (ENSMUSG00000031391) #13	Pdzd4 (ENSMUSG00000002006) #14	Ssr4 (ENSMUSG00000002014) #15	Idh3g (ENSMUSG00000002010) #16	Srpk3 (ENSMUSG00000002007) #17	Plxnb3 (ENSMUSG00000031385) #18	Abcd1 (ENSMUSG00000031378) #19	Bcap31 (ENSMUSG00000002015) #20	Slc6a8 (ENSMUSG00000019558) #21	Pnck (ENSMUSG00000002012) #22	Dusp9 (ENSMUSG00000031383) #23	Atp2b3 (ENSMUSG00000031376) #25	Bgn (ENSMUSG00000031375) #26	Haus7 (ENSMUSG00000031371) #27	Trex2 (ENSMUSG00000031372) #28	Zfp92 (ENSMUSG00000031374) #29	Gm18336 (ENSMUSG00000096966) #30	Zfp275 (ENSMUSG00000031365)	Gm45015 (ENSMUSG00000109368) #30	Xlr5c (ENSMUSG00000067764)	Xlr3c (ENSMUSG00000058147)	Xlr4c (ENSMUSG00000031362)	F8a (ENSMUSG00000078317)	Xlr4b (ENSMUSG00000067768)	Xlr3b (ENSMUSG00000073125)
Ryukyu mouse	MODERN SPECIES	19	Irak1 (MGP_CAROLIEiJ_G0033169)	Hcfc1 (MGP_CAROLIEiJ_G0033168) #8	Renbp (MGP_CAROLIEiJ_G0033167) #9	Naa10 (MGP_CAROLIEiJ_G0033166) #10	Avpr2 (MGP_CAROLIEiJ_G0033165) #12	Arhgap4 (MGP_CAROLIEiJ_G0033164) #11	L1cam (MGP_CAROLIEiJ_G0033163) #13	Pdzd4 (MGP_CAROLIEiJ_G0033162) #14	Ssr4 (MGP_CAROLIEiJ_G0033161) #15	Idh3g (MGP_CAROLIEiJ_G0033160) #16	Srpk3 (MGP_CAROLIEiJ_G0033159) #17	Plxnb3 (MGP_CAROLIEiJ_G0033158) #18	Abcd1 (MGP_CAROLIEiJ_G0033157) #19	Bcap31 (MGP_CAROLIEiJ_G0033156) #20	Slc6a8 (MGP_CAROLIEiJ_G0033155) #21	Pnck (MGP_CAROLIEiJ_G0033154) #22	Dusp9 (MGP_CAROLIEiJ_G0033153) #23	Atp2b3 (MGP_CAROLIEiJ_G0033152) #25	Bgn (MGP_CAROLIEiJ_G0033151) #26	Haus7 (MGP_CAROLIEiJ_G0033150) #27	Trex2 (MGP_CAROLIEiJ_G0033149) #28	Zfp92 (MGP_CAROLIEiJ_G0033148) #29	Zfp275 (MGP_CAROLIEiJ_G0033147)	Pnma5 (MGP_CAROLIEiJ_G0033146) ##30	Zfp185 (MGP_CAROLIEiJ_G0033145) #32	Nsdhl (MGP_CAROLIEiJ_G0033144) #33	Cetn2 (MGP_CAROLIEiJ_G0033143) #34	Gabrq (MGP_CAROLIEiJ_G0033142) #35	Gabra3 (MGP_CAROLIEiJ_G0033141)	Magea10 (MGP_CAROLIEiJ_G0033140)	Gabre (MGP_CAROLIEiJ_G0033139)
Shrew mouse	MODERN SPECIES	23	Irak1 (MGP_PahariEiJ_G0031712)	Hcfc1 (MGP_PahariEiJ_G0031711) #8	Renbp (MGP_PahariEiJ_G0031710) #9	Naa10 (MGP_PahariEiJ_G0031709) #10	Avpr2 (MGP_PahariEiJ_G0031708) #12	Arhgap4 (MGP_PahariEiJ_G0031707) #11	L1cam (MGP_PahariEiJ_G0031706) #13	Pdzd4 (MGP_PahariEiJ_G0031705) #14	Ssr4 (MGP_PahariEiJ_G0031704) #15	Idh3g (MGP_PahariEiJ_G0031703) #16	Srpk3 (MGP_PahariEiJ_G0031702) #17	Plxnb3 (MGP_PahariEiJ_G0031701) #18	Abcd1 (MGP_PahariEiJ_G0031700) #19	Bcap31 (MGP_PahariEiJ_G0031699) #20	Slc6a8 (MGP_PahariEiJ_G0031698) #21	Pnck (MGP_PahariEiJ_G0031697) #22	Dusp9 (MGP_PahariEiJ_G0031696) #23	Atp2b3 (MGP_PahariEiJ_G0031695) #25	Bgn (MGP_PahariEiJ_G0031694) #26	Haus7 (MGP_PahariEiJ_G0031693) #27	Trex2 (MGP_PahariEiJ_G0031692) #28	MGP_PahariEiJ_G0031691 #29	Zfp275 (MGP_PahariEiJ_G0031690)	MGP_PahariEiJ_G0031689	MGP_PahariEiJ_G0031688	MGP_PahariEiJ_G0031687	Zfp185 (MGP_PahariEiJ_G0031686) #32	Nsdhl (MGP_PahariEiJ_G0031685) #33	Cetn2 (MGP_PahariEiJ_G0031684) #34	Gabrq (MGP_PahariEiJ_G0031683) #35	Gabra3 (MGP_PahariEiJ_G0031682)
Rat	MODERN SPECIES	46	Irak1 (ENSRNOG00000060869)	Hcfc1 (ENSRNOG00000051948) #8	Renbp (ENSRNOG00000054765) #9	Naa10 (ENSRNOG00000060063) #10	Avpr2 (ENSRNOG00000059862) #12	Arhgap4 (ENSRNOG00000058545) #11	L1cam (ENSRNOG00000061230) #13	Pdzd4 (ENSRNOG00000056174) #14	Ssr4 (ENSRNOG00000053172) #15	Idh3g (ENSRNOG00000055572) #16	Srpk3 (ENSRNOG00000054548) #17	Plxnb3 (ENSRNOG00000061731) #18	Abcd1 (ENSRNOG00000056524) #19	Bcap31 (ENSRNOG00000055756) #20	Slc6a8 (ENSRNOG00000057620) #21	Pnck (ENSRNOG00000058317) #22	Dusp9 (ENSRNOG00000055185) #23	AABR07071935.1 (ENSRNOG00000061441)	Atp2b3 (ENSRNOG00000061304) #25	Bgn (ENSRNOG00000055962) #26	Haus7 (ENSRNOG00000055648) #27	Trex2 (ENSRNOG00000056983) #28	Zfp92 (ENSRNOG00000051836) #29	RGD1559982 (ENSRNOG00000070467) #30	Zfp275 (ENSRNOG00000061073)	ENSRNOG00000069789	Pwwp4 (ENSRNOG00000068777)	LOC100911002 (ENSRNOG00000050177)	Xlr3a (ENSRNOG00000064693)	LOC100911047 (ENSRNOG00000068104)	LOC103690322 (ENSRNOG00000055822)
Upper Galilee mountains blind mole rat	MODERN SPECIES	660	Irak1 (ENSNGAG00000011647)	Hcfc1 (ENSNGAG00000013083) #8	Renbp (ENSNGAG00000021686) #9	Naa10 (ENSNGAG00000020303) #10	Arhgap4 (ENSNGAG00000015413) #11	Avpr2 (ENSNGAG00000009849) #12	L1cam (ENSNGAG00000013550) #13	Pdzd4 (ENSNGAG00000009443) #14	ENSNGAG00000015787 #15	Idh3g (ENSNGAG00000017889) #16	Srpk3 (ENSNGAG00000021121) #17	Plxnb3 (ENSNGAG00000023368) #18	Abcd1 (ENSNGAG00000023420) #19	Bcap31 (ENSNGAG00000005195) #20	Slc6a8 (ENSNGAG00000012992) #21	Pnck (ENSNGAG00000024203) #22	Dusp9 (ENSNGAG00000022463) #23	ENSNGAG00000022572 #24	Atp2b3 (ENSNGAG00000023103) #25	Bgn (ENSNGAG00000020236) #26	Haus7 (ENSNGAG00000004509) #27	Trex2 (ENSNGAG00000022556) #28	Zfp92 (ENSNGAG00000014044) #29	Gm18336 (ENSNGAG00000010715) #30	Zfp275 (ENSNGAG00000023803)	Pnma3 (ENSNGAG00000021577) ##30	Zfp185 (ENSNGAG00000007010) #32	Nsdhl (ENSNGAG00000013199) #33	Cetn2 (ENSNGAG00000013931) #34	Gabrq (ENSNGAG00000023448) #35	Gabra3 (ENSNGAG00000004762)
Lesser Egyptian jerboa	MODERN SPECIES	224	Irak1 (ENSJJAG00000013849)	Hcfc1 (ENSJJAG00000012815) #8	Renbp (ENSJJAG00000010739) #9	Naa10 (ENSJJAG00000023398) #10	Arhgap4 (ENSJJAG00000021798) #11	Avpr2 (ENSJJAG00000018314) #12	L1cam (ENSJJAG00000021077) #13	Pdzd4 (ENSJJAG00000018534) #14	Ssr4 (ENSJJAG00000017842) #15	Idh3g (ENSJJAG00000015962) #16	Srpk3 (ENSJJAG00000019785) #17	Plxnb3 (ENSJJAG00000017006) #18	Abcd1 (ENSJJAG00000012430) #19	Bcap31 (ENSJJAG00000011510) #20	Slc6a8 (ENSJJAG00000022046) #21	Pnck (ENSJJAG00000020546) #22	Dusp9 (ENSJJAG00000018570) #23	Atp2b3 (ENSJJAG00000014975) #25	Bgn (ENSJJAG00000014050) #26	Haus7 (ENSJJAG00000011304) #27	Trex2 (ENSJJAG00000012484) #28	Zfp92 (ENSJJAG00000024019) #29	ENSJJAG00000023776 #30	Zfp275 (ENSJJAG00000023544)	ENSJJAG00000023268 #30	Pnma5 (ENSJJAG00000022106) ##30
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935 #34	ENSGT00940000162167 #35
Sciuridae	ANCESTRAL SPECIES	27	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a	ENSGT01030000234522.C.b.e.a.a.a.a.a.a ##30	ENSGT01030000234522.C.b.e.a.a.a.a.b ##30	ENSGT01030000234522.C.b.e.a.a.a.b ##30	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935.cb #34
Marmotini	ANCESTRAL SPECIES	83	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00950000182890.D.c.b.a.a.a
Marmotini_b	ANCESTRAL SPECIES	124	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00940000153582.b.a.a.b
Arctic ground squirrel	MODERN SPECIES	562	IRAK1 (ENSUPAG00010010971)	HCFC1 (ENSUPAG00010011877) #8	RENBP (ENSUPAG00010011941) #9	NAA10 (ENSUPAG00010011976) #10	ARHGAP4 (ENSUPAG00010012018) #11	AVPR2 (ENSUPAG00010012191) #12	L1CAM (ENSUPAG00010012204) #13	PDZD4 (ENSUPAG00010012358) #14	SSR4 (ENSUPAG00010012375) #15	IDH3G (ENSUPAG00010012400) #16	SRPK3 (ENSUPAG00010012441) #17	ENSUPAG00010012465 #18	ENSUPAG00010012496	ABCD1 (ENSUPAG00010012506) #19	ENSUPAG00010012523 #21	PNCK (ENSUPAG00010012527) #22	DUSP9 (ENSUPAG00010012557) #23	CCNQ (ENSUPAG00010012574) #24	ATP2B3 (ENSUPAG00010012590) #25	BGN (ENSUPAG00010012684) #26	HAUS7 (ENSUPAG00010012697) #27	TREX2 (ENSUPAG00010012721) #28	ZFP92 (ENSUPAG00010012725) #29	ENSUPAG00010012742 #30	ZNF275 (ENSUPAG00010012750)
Squirrel	MODERN SPECIES	409	HCFC1 (ENSSTOG00000029220) #8	RENBP (ENSSTOG00000010247) #9	NAA10 (ENSSTOG00000010237) #10	ARHGAP4 (ENSSTOG00000022503) #11	AVPR2 (ENSSTOG00000008352) #12	L1CAM (ENSSTOG00000008316) #13	PDZD4 (ENSSTOG00000021423) #14	SSR4 (ENSSTOG00000008278) #15	IDH3G (ENSSTOG00000008261) #16	SRPK3 (ENSSTOG00000008233) #17	PLXNB3 (ENSSTOG00000008197) #18	ENSSTOG00000008188	ABCD1 (ENSSTOG00000008153) #19	BCAP31 (ENSSTOG00000008138) #20	ENSSTOG00000026886 #21	PNCK (ENSSTOG00000008119) #22	DUSP9 (ENSSTOG00000008115) #23	CCNQ (ENSSTOG00000008103) #24	ATP2B3 (ENSSTOG00000008068) #25	BGN (ENSSTOG00000008058) #26	HAUS7 (ENSSTOG00000022988) #27	TREX2 (ENSSTOG00000027213) #28	ZFP92 (ENSSTOG00000009126) #29	ENSSTOG00000029369	ENSSTOG00000033034 #30	ZNF275 (ENSSTOG00000022633)	ENSSTOG00000032558
Alpin marmot	MODERN SPECIES	503																ENSMMMG00000000788 #22
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005018093	HCFC1 (ENSSVLG00005018524) #8	RENBP (ENSSVLG00005019023) #9	NAA10 (ENSSVLG00005019123) #10	ARHGAP4 (ENSSVLG00005019458) #11	ENSSVLG00005019536	AVPR2 (ENSSVLG00005019578) #12	PDZD4 (ENSSVLG00005019686) #14	SSR4 (ENSSVLG00005019816) #15	IDH3G (ENSSVLG00005019902) #16	SRPK3 (ENSSVLG00005020004) #17	ENSSVLG00005020066 #18	ABCD1 (ENSSVLG00005020163) #19	BCAP31 (ENSSVLG00005020208) #20	ENSSVLG00005020284 #21	PNCK (ENSSVLG00005020384) #22	DUSP9 (ENSSVLG00005020621) #23	CCNQ (ENSSVLG00005020662) #24	ATP2B3 (ENSSVLG00005020846) #25	BGN (ENSSVLG00005021572) #26	HAUS7 (ENSSVLG00005021619) #27	ZFP92 (ENSSVLG00005021718) #29	ENSSVLG00005021735 #30	ENSSVLG00005021782	ENSSVLG00005021871	ENSSVLG00005021891 ##30	ENSSVLG00005021915 ##30	PNMA3 (ENSSVLG00005021940) ##30	ENSSVLG00005021967 #30	PNMA5 (ENSSVLG00005022038) ##30	ZNF185 (ENSSVLG00005022073) #32
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00940000154488.B	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935.eb.a #34	ENSGT00940000162167 #35	ENSGT00940000159444	ENSGT00940000161201
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT01030000234522.C.b.e.a.a.a.a.a.b #30	ENSGT00940000154488.B	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935.eb.a #34	ENSGT00940000162167 #35	ENSGT00940000159444	ENSGT00940000154972
Hystricomorpha_b	ANCESTRAL SPECIES	84	ENSGT00940000160502	ENSGT00940000161383 #8	ENSGT00390000013740 #9	ENSGT00550000074803 #10	ENSGT00950000182824.a.b.b #11	ENSGT01050000244882.b.c.b #12	ENSGT00940000157506 #13	ENSGT00950000183062.a.b #14	ENSGT00390000008992 #15	ENSGT00950000182989.D.a.a.g.a #16	ENSGT00940000157877.b #17	ENSGT01020000230394.e.a.a.b.a.b #18	ENSGT00950000182955.a.b.a #19	ENSGT00390000011863.c #20	ENSGT00940000155869.v #21	ENSGT00940000162187 #22	ENSGT00940000161880 #23	ENSGT00940000155445 #24	ENSGT00940000160765 #25	ENSGT00940000155311.C #26	ENSGT00390000003937 #27	ENSGT00390000012715.a #28	ENSGT00940000162887 #29	ENSGT00940000154488.B	ENSGT00530000063872.A #32	ENSGT00940000158229 #33	ENSGT00940000155935.eb.a #34	ENSGT00940000162167 #35	ENSGT00940000159444	ENSGT00940000154972	ENSGT00940000161201
Long-tailed chinchilla	MODERN SPECIES	287	IRAK1 (ENSCLAG00000006192)	HCFC1 (ENSCLAG00000004175) #8	RENBP (ENSCLAG00000003810) #9	NAA10 (ENSCLAG00000001427) #10	ENSCLAG00000001334 #11	AVPR2 (ENSCLAG00000002650) #12	L1CAM (ENSCLAG00000001453) #13	PDZD4 (ENSCLAG00000002707) #14	SSR4 (ENSCLAG00000002670) #15	IDH3G (ENSCLAG00000002456) #16	SRPK3 (ENSCLAG00000001932) #17	PLXNB3 (ENSCLAG00000001828) #18	ABCD1 (ENSCLAG00000001650) #19	BCAP31 (ENSCLAG00000002843) #20	ENSCLAG00000002550 #21	PNCK (ENSCLAG00000002167) #22	DUSP9 (ENSCLAG00000008316) #23	CCNQ (ENSCLAG00000008202) #24	ATP2B3 (ENSCLAG00000006386) #25	BGN (ENSCLAG00000003040) #26	HAUS7 (ENSCLAG00000002789) #27	TREX2 (ENSCLAG00000002698) #28	ZFP92 (ENSCLAG00000002658) #29	ENSCLAG00000002477
Degu	MODERN SPECIES	259	HCFC1 (ENSODEG00000004823) #8	RENBP (ENSODEG00000005065) #9	ENSODEG00000005100 #10	ARHGAP4 (ENSODEG00000005124) #11	AVPR2 (ENSODEG00000005166) #12	ENSODEG00000005204	L1CAM (ENSODEG00000005259) #13	PDZD4 (ENSODEG00000005482) #14	SSR4 (ENSODEG00000002732) #15	IDH3G (ENSODEG00000002774) #16	SRPK3 (ENSODEG00000002869) #17	PLXNB3 (ENSODEG00000002965) #18	ABCD1 (ENSODEG00000003127) #19	BCAP31 (ENSODEG00000003174) #20	ENSODEG00000003207 #21	PNCK (ENSODEG00000003252) #22	DUSP9 (ENSODEG00000003261) #23	CCNQ (ENSODEG00000003285) #24	ATP2B3 (ENSODEG00000003358) #25	BGN (ENSODEG00000003451) #26	HAUS7 (ENSODEG00000003475) #27	TREX2 (ENSODEG00000019142) #28	ZFP92 (ENSODEG00000003508) #29	ENSODEG00000003535	NSDHL (ENSODEG00000003563) #33	ENSODEG00000003612 #34	GABRQ (ENSODEG00000003646) #35	ENSODEG00000003691	CCSER1 (ENSODEG00000002701)	ENSODEG00000002721	ENSODEG00000002731
Naked mole-rat female	MODERN SPECIES	31	MECP2 (ENSHGLG00000000899)	IRAK1 (ENSHGLG00000002116)	HCFC1 (ENSHGLG00000001143) #8	RENBP (ENSHGLG00000009835) #9	NAA10 (ENSHGLG00000002773) #10	ARHGAP4 (ENSHGLG00000000857) #11	AVPR2 (ENSHGLG00000006784) #12	L1CAM (ENSHGLG00000003403) #13	PDZD4 (ENSHGLG00000001939) #14	SSR4 (ENSHGLG00000001720) #15	IDH3G (ENSHGLG00000000443) #16	PLXNB3 (ENSHGLG00000002203) #18	ABCD1 (ENSHGLG00000001000) #19	BCAP31 (ENSHGLG00000000710) #20	ENSHGLG00000037294 #21	PNCK (ENSHGLG00000006098) #22	DUSP9 (ENSHGLG00000004236) #23	CCNQ (ENSHGLG00000003517) #24	ATP2B3 (ENSHGLG00000000642) #25	BGN (ENSHGLG00000004010) #26	HAUS7 (ENSHGLG00000002908) #27	TREX2 (ENSHGLG00000008010) #28	ENSHGLG00000035589 #29	ENSHGLG00000045727 #30	ENSHGLG00000046068	ENSHGLG00000032270	ENSHGLG00000035866	ENSHGLG00000000219	ENSHGLG00000045027	ENSHGLG00000047243	ENSHGLG00000045983