Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000163101
Glires	ANCESTRAL SPECIES	21	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000163101
Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000163101
Rodentia_B	ANCESTRAL SPECIES	43	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00940000162952	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000163101
Myomorpha	ANCESTRAL SPECIES	52	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00940000162952	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000163101
Muroidea	ANCESTRAL SPECIES	60	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00940000162952	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000159327 #37
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00940000162952	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000159327 #37
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00940000162952	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000159327 #37
Cricetinae	ANCESTRAL SPECIES	40	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000159327 #37
Chinese hamster chok1gshd	MODERN SPECIES	347	Ndufb7 (ENSCGRG00001019688) #7	Tecr (ENSCGRG00001016685) #8	Dnajb1 (ENSCGRG00001013728) #9	Gipc1 (ENSCGRG00001013034) #10	Ptger1 (ENSCGRG00001012182) #11	Pkn1 (ENSCGRG00001009026) #12	Ddx39a (ENSCGRG00001001611) #13	Adgre5 (ENSCGRG00001000548) #14	ENSCGRG00001000091 #15	Adgrl1 (ENSCGRG00001022080) #16	Asf1b (ENSCGRG00001018098) #17	PRKACA (ENSCGRG00001017184) #18	Samd1 (ENSCGRG00001016469) #19	1700067K01Rik (ENSCGRG00001015825) #20	Misp3 (ENSCGRG00001015443) #21	Palm3 (ENSCGRG00001015020) #22	Il27ra (ENSCGRG00001019895) #23	Rln3 (ENSCGRG00001018325) #24	Rfx1 (ENSCGRG00001011068) #25	Dcaf15 (ENSCGRG00001023898) #26	Podnl1 (ENSCGRG00001020503) #27	Cc2d1a (ENSCGRG00001014304) #28	Brme1 (ENSCGRG00001007024) #29	Nanos3 (ENSCGRG00001023851) #30	Zswim4 (ENSCGRG00001022171) #31	D8Ertd738e (ENSCGRG00001019898) #32	MRI1 (ENSCGRG00001015655) #33	Ccdc130 (ENSCGRG00001021573) #34	Cacna1a (ENSCGRG00001015728) #35	Ier2 (ENSCGRG00001015864) #36	Nacc1 (ENSCGRG00001016498) #37
Golden Hamster	MODERN SPECIES	893				Dnajb1 (ENSMAUG00000005728) #9	ENSMAUG00000009614 #10	Ptger1 (ENSMAUG00000012479) #11	Pkn1 (ENSMAUG00000012228) #12	Ddx39a (ENSMAUG00000008459) #13	Adgre5 (ENSMAUG00000018404) #14	Adgrl1 (ENSMAUG00000000445) #16	Asf1b (ENSMAUG00000020077) #17	Prkaca (ENSMAUG00000004842) #18	ENSMAUG00000011537	1700067K01Rik (ENSMAUG00000017815) #20	Misp3 (ENSMAUG00000015004) #21	Palm3 (ENSMAUG00000020501) #22	Il27ra (ENSMAUG00000004460) #23	Rln3 (ENSMAUG00000016189) #24	Rfx1 (ENSMAUG00000018885) #25	Dcaf15 (ENSMAUG00000010865) #26	Podnl1 (ENSMAUG00000010711) #27	Cc2d1a (ENSMAUG00000003818) #28	Brme1 (ENSMAUG00000021597) #29	Nanos3 (ENSMAUG00000008396) #30	Zswim4 (ENSMAUG00000021623) #31	Mri1 (ENSMAUG00000003451) #33	Ccdc130 (ENSMAUG00000020315) #34
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00940000159684 #16	ENSGT00520000059915 #15	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00940000162952	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000159327 #37
Northern American deer mouse	MODERN SPECIES	18	Ndufb7 (ENSPEMG00000010565) #7	Tecr (ENSPEMG00000008519) #8	Dnajb1 (ENSPEMG00000007843) #9	Gipc1 (ENSPEMG00000008496) #10	Ptger1 (ENSPEMG00000027389) #11	Pkn1 (ENSPEMG00000018704) #12	ENSPEMG00000017767 #13	Adgre5 (ENSPEMG00000012912) #14	ENSPEMG00000028964 #15	Adgrl1 (ENSPEMG00000008075) #16	Asf1b (ENSPEMG00000026306) #17	Prkaca (ENSPEMG00000002089) #18	ENSPEMG00000017586	1700067K01Rik (ENSPEMG00000008680) #20	Misp3 (ENSPEMG00000017574) #21	Palm3 (ENSPEMG00000000570) #22	Il27ra (ENSPEMG00000011917) #23	Rln3 (ENSPEMG00000005926) #24	Rfx1 (ENSPEMG00000014245) #25	Dcaf15 (ENSPEMG00000012514) #26	Podnl1 (ENSPEMG00000018883) #27	Brme1 (ENSPEMG00000000718) #29	Nanos3 (ENSPEMG00000030151) #30	Zswim4 (ENSPEMG00000009048) #31	D8Ertd738e (ENSPEMG00000027807) #32	Mri1 (ENSPEMG00000006105) #33	Ccdc130 (ENSPEMG00000013906) #34	ENSPEMG00000031086 #35	ENSPEMG00000030103 #35	Ier2 (ENSPEMG00000005842) #36	ENSPEMG00000028317
Prairie vole	MODERN SPECIES	173	Tecr (ENSMOCG00000018776) #8	ENSMOCG00000016066 #9	ENSMOCG00000017692	Gipc1 (ENSMOCG00000008417) #10	Ptger1 (ENSMOCG00000012350) #11	Pkn1 (ENSMOCG00000001118) #12	Ddx39a (ENSMOCG00000016890) #13	Adgre5 (ENSMOCG00000015102) #14	Adgrl1 (ENSMOCG00000019230) #16	ENSMOCG00000016743 #15	Asf1b (ENSMOCG00000019691) #17	Prkaca (ENSMOCG00000009319) #18	ENSMOCG00000000409	1700067K01Rik (ENSMOCG00000012915) #20	Misp3 (ENSMOCG00000012756) #21	Palm3 (ENSMOCG00000019944) #22	Il27ra (ENSMOCG00000015066) #23	Rln3 (ENSMOCG00000011994) #24	Rfx1 (ENSMOCG00000009461) #25	Dcaf15 (ENSMOCG00000017126) #26	ENSMOCG00000019700	Podnl1 (ENSMOCG00000019920) #27	Cc2d1a (ENSMOCG00000009561) #28	Brme1 (ENSMOCG00000019462) #29	Nanos3 (ENSMOCG00000000059) #30	Zswim4 (ENSMOCG00000013310) #31	D8Ertd738e (ENSMOCG00000000560) #32	Mri1 (ENSMOCG00000009591) #33	ENSMOCG00000009861 #34	ENSMOCG00000010484	Cacna1a (ENSMOCG00000014432) #35
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000159327 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00940000162952	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT00950000183929	ENSGT00900000143265	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35
Mus_A	ANCESTRAL SPECIES	8	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186.c #18	ENSGT00940000162952	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT00950000183929	ENSGT00900000143265	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35
Mus_B	ANCESTRAL SPECIES	6	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186.c #18	ENSGT00940000162952	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT00950000183929	ENSGT00900000143265	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35
Mouse	MODERN SPECIES	17	Ndufb7 (ENSMUSG00000033938) #7	Tecr (ENSMUSG00000031708) #8	Dnajb1 (ENSMUSG00000005483) #9	Gipc1 (ENSMUSG00000019433) #10	Pkn1 (ENSMUSG00000057672) #12	Ptger1 (ENSMUSG00000019464) #11	Ddx39a (ENSMUSG00000005481) #13	Adgre5 (ENSMUSG00000002885) #14	Adgrl1 (ENSMUSG00000013033) #16	Asf1b (ENSMUSG00000005470) #17	Prkaca (ENSMUSG00000005469) #18	SMIM46 (ENSMUSG00000121579)	Samd1 (ENSMUSG00000079003) #19	1700067K01Rik (ENSMUSG00000046408) #20	Misp3 (ENSMUSG00000074217) #21	Palm3 (ENSMUSG00000047986) #22	Il27ra (ENSMUSG00000005465) #23	Rln3 (ENSMUSG00000045232) #24	Gm10643 (ENSMUSG00000074215)	Rfx1 (ENSMUSG00000031706) #25	Dcaf15 (ENSMUSG00000037103) #26	Podnl1 (ENSMUSG00000012889) #27	Cc2d1a (ENSMUSG00000036686) #28	Brme1 (ENSMUSG00000008129) #29	Nanos3 (ENSMUSG00000056155) #30	Zswim4 (ENSMUSG00000035671) #31	D8Ertd738e (ENSMUSG00000019362) #32	Mri1 (ENSMUSG00000004996) #33	Ccdc130 (ENSMUSG00000004994) #34	Cacna1a (ENSMUSG00000034656) #35	Ier2 (ENSMUSG00000053560) #36
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186.c #18	ENSGT00940000162952	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT00950000183929	ENSGT00900000143265	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35
spretus	MODERN SPECIES	17	Or10k2 (MGP_SPRETEiJ_G0032389)	Ndufb7 (MGP_SPRETEiJ_G0032390) #7	Tecr (MGP_SPRETEiJ_G0032391) #8	Dnajb1 (MGP_SPRETEiJ_G0032392) #9	Gipc1 (MGP_SPRETEiJ_G0032393) #10	Ptger1 (MGP_SPRETEiJ_G0032394) #11	Pkn1 (MGP_SPRETEiJ_G0032395) #12	Ddx39a (MGP_SPRETEiJ_G0032396) #13	Adgre5 (MGP_SPRETEiJ_G0032397) #14	Adgrl1 (MGP_SPRETEiJ_G0032398) #16	MGP_SPRETEiJ_G0032399 #15	Asf1b (MGP_SPRETEiJ_G0032400) #17	Prkaca (MGP_SPRETEiJ_G0032401) #18	1700067K01Rik (MGP_SPRETEiJ_G0032402) #20	Misp3 (MGP_SPRETEiJ_G0032403) #21	Palm3 (MGP_SPRETEiJ_G0032404) #22	Il27ra (MGP_SPRETEiJ_G0032405) #23	Rln3 (MGP_SPRETEiJ_G0032406) #24	Gm10643 (MGP_SPRETEiJ_G0032407)	MGP_SPRETEiJ_G0032408	Rfx1 (MGP_SPRETEiJ_G0032409) #25	Dcaf15 (MGP_SPRETEiJ_G0032410) #26	Podnl1 (MGP_SPRETEiJ_G0032411) #27	Cc2d1a (MGP_SPRETEiJ_G0032412) #28	Brme1 (MGP_SPRETEiJ_G0032413) #29	Nanos3 (MGP_SPRETEiJ_G0032414) #30	Zswim4 (MGP_SPRETEiJ_G0032415) #31	D8Ertd738e (MGP_SPRETEiJ_G0032416) #32	Mri1 (MGP_SPRETEiJ_G0032417) #33	Ccdc130 (MGP_SPRETEiJ_G0032418) #34	Cacna1a (MGP_SPRETEiJ_G0032419) #35
Steppe mouse	MODERN SPECIES	2936	Or10k2 (ENSMSIG00000011619)	Ndufb7 (ENSMSIG00000011624) #7	ENSMSIG00000011638 #8	Dnajb1 (ENSMSIG00000011684) #9	Gipc1 (ENSMSIG00000011710) #10	Ptger1 (ENSMSIG00000011721) #11	Pkn1 (ENSMSIG00000011733) #12	Ddx39a (ENSMSIG00000011831) #13	Adgre5 (ENSMSIG00000011871) #14	Adgrl1 (ENSMSIG00000012147) #16	Asf1b (ENSMSIG00000012561) #17	Prkaca (ENSMSIG00000012589) #18	ENSMSIG00000012646	1700067K01Rik (ENSMSIG00000012658) #20	ENSMSIG00000012685 #21	Palm3 (ENSMSIG00000012709) #22	Il27ra (ENSMSIG00000012734) #23	Rln3 (ENSMSIG00000012772) #24	ENSMSIG00000012780	Rfx1 (ENSMSIG00000012789) #25	Dcaf15 (ENSMSIG00000012945) #26	Podnl1 (ENSMSIG00000012995) #27	Cc2d1a (ENSMSIG00000013019) #28	Brme1 (ENSMSIG00000013081) #29	Nanos3 (ENSMSIG00000013144) #30	Zswim4 (ENSMSIG00000013176) #31	D8Ertd738e (ENSMSIG00000013244) #32	Mri1 (ENSMSIG00000013255) #33	Ccdc130 (ENSMSIG00000013278) #34	Cacna1a (ENSMSIG00000013335) #35
Ryukyu mouse	MODERN SPECIES	17	Ndufb7 (MGP_CAROLIEiJ_G0031271) #7	Tecr (MGP_CAROLIEiJ_G0031272) #8	Dnajb1 (MGP_CAROLIEiJ_G0031273) #9	Gipc1 (MGP_CAROLIEiJ_G0031274) #10	Ptger1 (MGP_CAROLIEiJ_G0031275) #11	Pkn1 (MGP_CAROLIEiJ_G0031276) #12	Ddx39a (MGP_CAROLIEiJ_G0031277) #13	Adgre5 (MGP_CAROLIEiJ_G0031278) #14	Adgrl1 (MGP_CAROLIEiJ_G0031279) #16	MGP_CAROLIEiJ_G0031280 #15	Asf1b (MGP_CAROLIEiJ_G0031281) #17	Prkaca (MGP_CAROLIEiJ_G0031282) #18	MGP_CAROLIEiJ_G0031283	1700067K01Rik (MGP_CAROLIEiJ_G0031284) #20	Misp3 (MGP_CAROLIEiJ_G0031285) #21	Palm3 (MGP_CAROLIEiJ_G0031286) #22	Il27ra (MGP_CAROLIEiJ_G0031287) #23	Rln3 (MGP_CAROLIEiJ_G0031288) #24	MGP_CAROLIEiJ_G0031289	MGP_CAROLIEiJ_G0031290	Rfx1 (MGP_CAROLIEiJ_G0031291) #25	Dcaf15 (MGP_CAROLIEiJ_G0031292) #26	Podnl1 (MGP_CAROLIEiJ_G0031293) #27	Cc2d1a (MGP_CAROLIEiJ_G0031294) #28	Brme1 (MGP_CAROLIEiJ_G0031295) #29	Nanos3 (MGP_CAROLIEiJ_G0031296) #30	Zswim4 (MGP_CAROLIEiJ_G0031297) #31	D8Ertd738e (MGP_CAROLIEiJ_G0031298) #32	Mri1 (MGP_CAROLIEiJ_G0031299) #33	MGP_CAROLIEiJ_G0031300 #34	Cacna1a (MGP_CAROLIEiJ_G0031301) #35
Shrew mouse	MODERN SPECIES	12	Ndufb7 (MGP_PahariEiJ_G0022877) #7	Tecr (MGP_PahariEiJ_G0022878) #8	Dnajb1 (MGP_PahariEiJ_G0022879) #9	Gipc1 (MGP_PahariEiJ_G0022880) #10	Pkn1 (MGP_PahariEiJ_G0022881) #12	Ptger1 (MGP_PahariEiJ_G0022882) #11	Ddx39a (MGP_PahariEiJ_G0022883) #13	Adgre5 (MGP_PahariEiJ_G0022884) #14	Adgrl1 (MGP_PahariEiJ_G0022885) #16	MGP_PahariEiJ_G0022886 #15	Asf1b (MGP_PahariEiJ_G0022887) #17	Prkaca (MGP_PahariEiJ_G0022888) #18	MGP_PahariEiJ_G0022889	1700067K01Rik (MGP_PahariEiJ_G0022890) #20	Misp3 (MGP_PahariEiJ_G0022891) #21	Palm3 (MGP_PahariEiJ_G0022892) #22	Il27ra (MGP_PahariEiJ_G0022893) #23	Rln3 (MGP_PahariEiJ_G0022894) #24	MGP_PahariEiJ_G0022895	MGP_PahariEiJ_G0022896	Rfx1 (MGP_PahariEiJ_G0022897) #25	Dcaf15 (MGP_PahariEiJ_G0022898) #26	Podnl1 (MGP_PahariEiJ_G0022899) #27	Cc2d1a (MGP_PahariEiJ_G0022900) #28	Brme1 (MGP_PahariEiJ_G0022901) #29	Nanos3 (MGP_PahariEiJ_G0022902) #30	Zswim4 (MGP_PahariEiJ_G0022903) #31	D8Ertd738e (MGP_PahariEiJ_G0022904) #32	Mri1 (MGP_PahariEiJ_G0022905) #33	Ccdc130 (MGP_PahariEiJ_G0022906) #34	Cacna1a (MGP_PahariEiJ_G0022907) #35
Rat	MODERN SPECIES	10	Ndufb7 (ENSRNOG00000028717) #7	Tecr (ENSRNOG00000021808) #8	Dnajb1 (ENSRNOG00000021824) #9	Ptger1 (ENSRNOG00000004094) #11	Gipc1 (ENSRNOG00000003864) #10	Pkn1 (ENSRNOG00000004131) #12	Ddx39a (ENSRNOG00000004373) #13	Adgre5 (ENSRNOG00000004489) #14	AABR07043167.1 (ENSRNOG00000039252) #15	Adgrl1 (ENSRNOG00000029134) #16	Asf1b (ENSRNOG00000005115) #17	Prkaca (ENSRNOG00000005257) #18	Samd1 (ENSRNOG00000065861) #19	LOC686013 (ENSRNOG00000005533) #20	Misp3 (ENSRNOG00000005619) #21	Il27ra (ENSRNOG00000005729) #22	Il27ra (ENSRNOG00000005747) #23	Rln3 (ENSRNOG00000005911) #24	Rfx1 (ENSRNOG00000006049) #25	Dcaf15 (ENSRNOG00000006551) #26	Podnl1 (ENSRNOG00000006741) #27	Cc2d1a (ENSRNOG00000006747) #28	Brme1 (ENSRNOG00000025796) #29	Nanos3 (ENSRNOG00000031593) #30	LOC288913 (ENSRNOG00000049931) #32	Mri1 (ENSRNOG00000026211) #33	Yju2b (ENSRNOG00000008319) #34	Cacna1a (ENSRNOG00000052707) #35	Ier2 (ENSRNOG00000067274) #36	Nacc1 (ENSRNOG00000002864) #37	Trmt1 (ENSRNOG00000002914)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1738	Tecr (ENSNGAG00000018503) #8	ENSNGAG00000023511	Dnajb1 (ENSNGAG00000023791) #9	Gipc1 (ENSNGAG00000001250) #10	Ptger1 (ENSNGAG00000015906) #11	Pkn1 (ENSNGAG00000018524) #12	Ddx39a (ENSNGAG00000010734) #13	Adgre5 (ENSNGAG00000021625) #14	Adgrl1 (ENSNGAG00000013398) #16	ENSNGAG00000021731 #15	Asf1b (ENSNGAG00000019502) #17	Prkaca (ENSNGAG00000004941) #18	Samd1 (ENSNGAG00000014280) #19	1700067K01Rik (ENSNGAG00000022697) #20	Misp3 (ENSNGAG00000007990) #21	Palm3 (ENSNGAG00000000694) #22	Il27ra (ENSNGAG00000012078) #23	Rln3 (ENSNGAG00000014225) #24	Rfx1 (ENSNGAG00000015296) #25	Dcaf15 (ENSNGAG00000009961) #26	Podnl1 (ENSNGAG00000000890) #27	Cc2d1a (ENSNGAG00000020333) #28	ENSNGAG00000007857 #29	Nanos3 (ENSNGAG00000020486) #30	Zswim4 (ENSNGAG00000001121) #31	D8Ertd738e (ENSNGAG00000016091) #32	Mri1 (ENSNGAG00000022102) #33	ENSNGAG00000011971 #34	Cacna1a (ENSNGAG00000000916) #35	Nacc1 (ENSNGAG00000021982) #37	Trmt1 (ENSNGAG00000022486)
Lesser Egyptian jerboa	MODERN SPECIES	234											Adgrl1 (ENSJJAG00000010567) #16	Asf1b (ENSJJAG00000022179) #17	Prkaca (ENSJJAG00000021581) #18	1700067K01Rik (ENSJJAG00000019559) #20	Misp3 (ENSJJAG00000019250) #21	ENSJJAG00000019152 #22	Il27ra (ENSJJAG00000016724) #23	Rln3 (ENSJJAG00000016021) #24	Rfx1 (ENSJJAG00000007901) #25	Dcaf15 (ENSJJAG00000020594) #26	Podnl1 (ENSJJAG00000019479) #27	Cc2d1a (ENSJJAG00000011117) #28	Nanos3 (ENSJJAG00000000545) #30	Zswim4 (ENSJJAG00000019795) #31	D8Ertd738e (ENSJJAG00000019133) #32	Mri1 (ENSJJAG00000018104) #33	ENSJJAG00000015193 #34	Cacna1a (ENSJJAG00000020086) #35	Ier2 (ENSJJAG00000015305) #36	ENSJJAG00000012119	Nacc1 (ENSJJAG00000000199) #37
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000163101
Hystricomorpha	ANCESTRAL SPECIES	55	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00940000159684 #16	ENSGT00520000059915 #15	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00940000163111.a.b.a	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000159327 #37
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000035999	NDUFB7 (ENSHGLG00000044161) #7	ENSHGLG00000018607 #8	DNAJB1 (ENSHGLG00000016171) #9	GIPC1 (ENSHGLG00000035217) #10	PTGER1 (ENSHGLG00000015428) #11	PKN1 (ENSHGLG00000015605) #12	DDX39A (ENSHGLG00000018263) #13	ENSHGLG00000042784	ADGRL1 (ENSHGLG00000011314) #16	ENSHGLG00000009203 #17	ENSHGLG00000007137	ENSHGLG00000041868 #19	C19orf67 (ENSHGLG00000004595) #20	MISP3 (ENSHGLG00000004102) #21	ENSHGLG00000038000 #22	IL27RA (ENSHGLG00000008513) #23	RLN3 (ENSHGLG00000006860) #24	RFX1 (ENSHGLG00000013500) #25	DCAF15 (ENSHGLG00000010729) #26	PODNL1 (ENSHGLG00000008104) #27	ENSHGLG00000003199 #29	NANOS3 (ENSHGLG00000019378) #30	ZSWIM4 (ENSHGLG00000019264) #31	C19orf53 (ENSHGLG00000035084) #32	MRI1 (ENSHGLG00000010969) #33	YJU2B (ENSHGLG00000008180) #34	IER2 (ENSHGLG00000050933) #36	ENSHGLG00000050447	NACC1 (ENSHGLG00000008369) #37	LYL1 (ENSHGLG00000046929)
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00940000159684 #16	ENSGT00520000059915 #15	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000159327 #37
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00940000159684 #16	ENSGT00520000059915 #15	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000159327 #37
Long-tailed chinchilla	MODERN SPECIES	122			TECR (ENSCLAG00000015751) #8	NDUFB7 (ENSCLAG00000015228) #7	DNAJB1 (ENSCLAG00000014789) #9	GIPC1 (ENSCLAG00000016614) #10	PTGER1 (ENSCLAG00000015236) #11	PKN1 (ENSCLAG00000016252) #12	DDX39A (ENSCLAG00000015069) #13	ADGRE5 (ENSCLAG00000014267) #14	ENSCLAG00000013773	ADGRL1 (ENSCLAG00000013543) #16	ASF1B (ENSCLAG00000011839) #17	PRKACA (ENSCLAG00000015604) #18	C19orf67 (ENSCLAG00000014973) #20	PALM3 (ENSCLAG00000016217) #22	IL27RA (ENSCLAG00000013752) #23	RLN3 (ENSCLAG00000013074) #24	RFX1 (ENSCLAG00000013348) #25	DCAF15 (ENSCLAG00000015146) #26	PODNL1 (ENSCLAG00000013361) #27	CC2D1A (ENSCLAG00000012998) #28	ENSCLAG00000015002 #29	NANOS3 (ENSCLAG00000015139) #30	ZSWIM4 (ENSCLAG00000011642) #31	C19orf53 (ENSCLAG00000011489) #32	MRI1 (ENSCLAG00000013025) #33	YJU2B (ENSCLAG00000011790) #34	CACNA1A (ENSCLAG00000013282) #35	IER2 (ENSCLAG00000015309) #36	NACC1 (ENSCLAG00000016122) #37
Degu	MODERN SPECIES	114	NDUFB7 (ENSODEG00000008312) #7	ENSODEG00000008880 #8	DNAJB1 (ENSODEG00000008741) #9	ENSODEG00000008921 #10	PTGER1 (ENSODEG00000010144) #11	PKN1 (ENSODEG00000008829) #12	ENSODEG00000009068 #13	ADGRE5 (ENSODEG00000009226) #14	ENSODEG00000019750	ADGRL1 (ENSODEG00000008624) #16	ENSODEG00000009258 #15	ASF1B (ENSODEG00000009467) #17	PRKACA (ENSODEG00000009087) #18	C19orf67 (ENSODEG00000010090) #20	MISP3 (ENSODEG00000009732) #21	PALM3 (ENSODEG00000008820) #22	IL27RA (ENSODEG00000009893) #23	RLN3 (ENSODEG00000009268) #24	RFX1 (ENSODEG00000011025) #25	DCAF15 (ENSODEG00000010421) #26	ENSODEG00000011425	PODNL1 (ENSODEG00000009051) #27	CC2D1A (ENSODEG00000009306) #28	NANOS3 (ENSODEG00000008907) #30	ZSWIM4 (ENSODEG00000009901) #31	C19orf53 (ENSODEG00000009270) #32	ENSODEG00000010083 #33	YJU2B (ENSODEG00000009976) #34	CACNA1A (ENSODEG00000009256) #35	IER2 (ENSODEG00000013532) #36	NACC1 (ENSODEG00000009255) #37
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000163101
Marmotini	ANCESTRAL SPECIES	41	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000163101
Marmotini_b	ANCESTRAL SPECIES	40	ENSGT00390000018759 #7	ENSGT00950000182886.a.a.b #8	ENSGT00940000160312 #9	ENSGT00390000003420.a.a #10	ENSGT01030000234559.a.a.b.a #11	ENSGT00940000154990 #12	ENSGT00940000154912 #13	ENSGT00940000160578 #14	ENSGT00520000059915 #15	ENSGT00940000159684 #16	ENSGT00390000004692.d.a #17	ENSGT00940000162186 #18	ENSGT00530000063936.a #19	ENSGT00390000009916 #20	ENSGT00940000154739.A #21	ENSGT00390000009016 #22	ENSGT00700000104610 #23	ENSGT00940000154396.b.a #24	ENSGT01050000244879.a.b #25	ENSGT00390000011987 #26	ENSGT00940000162059 #27	ENSGT00390000009595.b #28	ENSGT00390000016855 #29	ENSGT00950000183135.A.b #30	ENSGT00940000162102 #31	ENSGT00390000011740 #32	ENSGT00390000013732 #33	ENSGT00530000063615.b #34	ENSGT00940000156518.C #35	ENSGT00900000141021.b.b #36	ENSGT00940000163101
Squirrel	MODERN SPECIES	259	ENSSTOG00000026233	ADGRE3 (ENSSTOG00000013792)	NDUFB7 (ENSSTOG00000013808) #7	TECR (ENSSTOG00000013803) #8	DNAJB1 (ENSSTOG00000026438) #9	GIPC1 (ENSSTOG00000013788) #10	PTGER1 (ENSSTOG00000013787) #11	PKN1 (ENSSTOG00000029002) #12	DDX39A (ENSSTOG00000013762) #13	ADGRE5 (ENSSTOG00000013742) #14	ENSSTOG00000021516 #15	ADGRL1 (ENSSTOG00000024713) #16	ASF1B (ENSSTOG00000002335) #17	PRKACA (ENSSTOG00000002327) #18	C19orf67 (ENSSTOG00000001321) #20	PALM3 (ENSSTOG00000023133) #22	IL27RA (ENSSTOG00000008690) #23	RLN3 (ENSSTOG00000024302) #24	RFX1 (ENSSTOG00000025432) #25	DCAF15 (ENSSTOG00000024329) #26	PODNL1 (ENSSTOG00000021014) #27	CC2D1A (ENSSTOG00000019980) #28	BRME1 (ENSSTOG00000028732) #29	NANOS3 (ENSSTOG00000024797) #30	ZSWIM4 (ENSSTOG00000021055) #31	C19orf53 (ENSSTOG00000011602) #32	MRI1 (ENSSTOG00000020750) #33	YJU2B (ENSSTOG00000006281) #34	CACNA1A (ENSSTOG00000024862) #35	IER2 (ENSSTOG00000007900) #36	STX10 (ENSSTOG00000007880)
Arctic ground squirrel	MODERN SPECIES	217	ENSUPAG00010012250	NDUFB7 (ENSUPAG00010012248) #7	TECR (ENSUPAG00010012195) #8	DNAJB1 (ENSUPAG00010012186) #9	GIPC1 (ENSUPAG00010012168) #10	PTGER1 (ENSUPAG00010012165) #11	PKN1 (ENSUPAG00010012107) #12	DDX39A (ENSUPAG00010012095) #13	ADGRE5 (ENSUPAG00010012057) #14	ADGRL1 (ENSUPAG00010011915) #16	ASF1B (ENSUPAG00010011900) #17	PRKACA (ENSUPAG00010011860) #18	ENSUPAG00010011851 #19	C19orf67 (ENSUPAG00010011838) #20	MISP3 (ENSUPAG00010011828) #21	PALM3 (ENSUPAG00010011814) #22	IL27RA (ENSUPAG00010011800) #23	RLN3 (ENSUPAG00010011794) #24	RFX1 (ENSUPAG00010011748) #25	DCAF15 (ENSUPAG00010011735) #26	PODNL1 (ENSUPAG00010011723) #27	CC2D1A (ENSUPAG00010011706) #28	BRME1 (ENSUPAG00010011699) #29	NANOS3 (ENSUPAG00010011697) #30	ZSWIM4 (ENSUPAG00010011666) #31	C19orf53 (ENSUPAG00010011656) #32	MRI1 (ENSUPAG00010011651) #33	YJU2B (ENSUPAG00010011639) #34	CACNA1A (ENSUPAG00010008388) #35	IER2 (ENSUPAG00010008375) #36	STX10 (ENSUPAG00010008362)
Eurasian red squirrel	MODERN SPECIES	7	NDUFB7 (ENSSVLG00005025616) #7	ENSSVLG00005025594 #8	DNAJB1 (ENSSVLG00005025574) #9	GIPC1 (ENSSVLG00005025566) #10	PTGER1 (ENSSVLG00005025557) #11	PKN1 (ENSSVLG00005025535) #12	DDX39A (ENSSVLG00005025506) #13	ADGRE5 (ENSSVLG00005025449) #14	ENSSVLG00005025403 #16	ENSSVLG00005025395	ASF1B (ENSSVLG00005025369) #17	PRKACA (ENSSVLG00005025328) #18	ENSSVLG00005025298 #19	C19orf67 (ENSSVLG00005025279) #20	MISP3 (ENSSVLG00005025270) #21	PALM3 (ENSSVLG00005025246) #22	IL27RA (ENSSVLG00005025225) #23	RLN3 (ENSSVLG00005025204) #24	RFX1 (ENSSVLG00005025184) #25	DCAF15 (ENSSVLG00005025150) #26	PODNL1 (ENSSVLG00005025116) #27	ENSSVLG00005025075 #29	NANOS3 (ENSSVLG00005025060) #30	ZSWIM4 (ENSSVLG00005025031) #31	C19orf53 (ENSSVLG00005025010) #32	MRI1 (ENSSVLG00005025000) #33	YJU2B (ENSSVLG00005024977) #34	ENSSVLG00005024956	ENSSVLG00005024939	ENSSVLG00005024924	ENSSVLG00005024893
Tree shrew	MODERN SPECIES	4750																ENSTBEG00000003515 #22