Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a #22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a #22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a #22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a #22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a #22 Amniota ANCESTRAL SPECIES 27 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00990000204366 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a Mammalia ANCESTRAL SPECIES 87 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a Theria ANCESTRAL SPECIES 23 ENSGT00950000182858.B.b ENSGT00950000182858.B.a ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670 #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Eutheria ANCESTRAL SPECIES 7 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670 #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b Primates ANCESTRAL SPECIES 9 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b Haplorrhini DUPLICATION Haplorrhini ANCESTRAL SPECIES 9 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Simiiformes ANCESTRAL SPECIES 11 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00910000147463 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00950000182858.B.b.a ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00910000147835 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00390000006051.a.b.a.a.j.a.a ENSGT00940000160778 ENSGT00390000003140.B.i ENSGT00940000160949 ENSGT00390000003140.B.j.a ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00940000155853 #8 ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00900000143673 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00910000147835 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00390000003860.h.a.a ENSGT00940000158084 ENSGT00390000006051.a.b.a.a.j.a.a ENSGT00940000160778 ENSGT00910000147463 ENSGT00940000160949 ENSGT00390000003140.B.i ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00940000156689 #7 ENSGT00940000155853 #8 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00900000143673 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00910000147835 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00390000003860.h.a.a.a ENSGT00940000158084 ENSGT00390000006051.a.b.a.a.j.a.a ENSGT00940000160778 ENSGT00910000147463 ENSGT00940000160949 ENSGT00390000003140.B.i ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00390000018089 ENSGT00390000008938 ENSGT00940000156689 #7 ENSGT00940000155853 #8 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00390000003860.h.a.a.a ENSGT00940000158084 ENSGT00390000006051.a.b.a.a.j.a.a ENSGT00940000160778 ENSGT00910000147463 ENSGT00940000160949 ENSGT00390000003140.B.i ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 Cercopithecinae_d ANCESTRAL SPECIES 94 ENSGT00940000156689 #7 ENSGT00940000155853 #8 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00390000018018.tb.q.a #13 ENSGT00910000147914 #14 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00390000003860.h.a.a.a ENSGT00940000158084 ENSGT00940000160778 ENSGT00910000147463 ENSGT00940000160949 ENSGT00390000003140.B.i ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b Drill MODERN SPECIES 1009 ENSMLEG00000028214 #7 DAB2IP (ENSMLEG00000030338) #8 STOM (ENSMLEG00000027680) #9 GSN (ENSMLEG00000030126) #10 RAB14 (ENSMLEG00000031858) #11 CNTRL (ENSMLEG00000006810) #12 ENSMLEG00000032688 #13 ENSMLEG00000031339 #14 C5 (ENSMLEG00000033900) #15 TRAF1 (ENSMLEG00000036144) #16 PHF19 (ENSMLEG00000042441) #17 PSMD5 (ENSMLEG00000030244) #18 B3GALT9 (ENSMLEG00000044181) #19 FBXW2 (ENSMLEG00000043755) #20 MEGF9 (ENSMLEG00000031479) #21 CDK5RAP2 (ENSMLEG00000039905) #22 Sooty mangabey MODERN SPECIES 101 NDUFA8 (ENSCATG00000037718) TTLL11 (ENSCATG00000034580) #7 DAB2IP (ENSCATG00000033621) #8 STOM (ENSCATG00000013679) #9 GSN (ENSCATG00000008962) #10 RAB14 (ENSCATG00000035718) #11 CNTRL (ENSCATG00000016072) #12 ENSCATG00000016989 #13 ENSCATG00000044742 #14 C5 (ENSCATG00000039919) #15 TRAF1 (ENSCATG00000032961) #16 PHF19 (ENSCATG00000045217) #17 PSMD5 (ENSCATG00000044218) #18 FBXW2 (ENSCATG00000042032) #20 MEGF9 (ENSCATG00000034491) #21 CDK5RAP2 (ENSCATG00000027840) #22 ENSCATG00000041729 BRINP1 (ENSCATG00000038611) ENSCATG00000010186 TLR4 (ENSCATG00000043557) ASTN2 (ENSCATG00000038700) ENSCATG00000030399 TRIM32 (ENSCATG00000019499) PAPPA (ENSCATG00000030317) ENSCATG00000026641 TNC (ENSCATG00000040751) TNFSF8 (ENSCATG00000037569) TNFSF15 (ENSCATG00000043693) TEX48 (ENSCATG00000041509) TEX53 (ENSCATG00000038014) TMEM268 (ENSCATG00000038211) Olive baboon MODERN SPECIES 4 MORN5 (ENSPANG00000034028) NDUFA8 (ENSPANG00000042514) TTLL11 (ENSPANG00000025827) #7 DAB2IP (ENSPANG00000025828) #8 ENSPANG00000025829 STOM (ENSPANG00000025830) #9 GSN (ENSPANG00000025832) #10 RAB14 (ENSPANG00000025819) #11 CNTRL (ENSPANG00000025820) #12 C5 (ENSPANG00000025822) #15 PHF19 (ENSPANG00000025817) #17 PSMD5 (ENSPANG00000025810) #18 B3GALT9 (ENSPANG00000048962) #19 FBXW2 (ENSPANG00000025813) #20 MEGF9 (ENSPANG00000025814) #21 CDK5RAP2 (ENSPANG00000025815) #22 ENSPANG00000047206 ENSPANG00000050049 ENSPANG00000049720 ENSPANG00000034969 BRINP1 (ENSPANG00000025809) ENSPANG00000037035 ENSPANG00000039681 TLR4 (ENSPANG00000025800) TRIM32 (ENSPANG00000021111) ASTN2 (ENSPANG00000025801) PAPPA (ENSPANG00000025803) TNC (ENSPANG00000025804) TNFSF8 (ENSPANG00000025806) TNFSF15 (ENSPANG00000025807) TEX48 (ENSPANG00000031965) Macaca ANCESTRAL SPECIES 10 ENSGT00940000156689 #7 ENSGT00940000155853 #8 ENSGT01030000234614.B.a.a.a.j #9 ENSGT00940000155591 #10 ENSGT00900000143673 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00910000147835 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00390000003860.h.a.a.a ENSGT00940000158084 ENSGT00390000006051.a.b.a.a.j.a.a ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B.i ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b Macaca_a ANCESTRAL SPECIES 10 ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.b.a.b.b.d.a ENSGT00940000155853 #8 ENSGT01030000234614.B.a.a.a.j #9 ENSGT00940000155591 #10 ENSGT00900000143673 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.a.a.a.a.a ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000170471.B.a.b.b ENSGT00940000158084 ENSGT00390000006051.a.b.a.a.j.a.a ENSGT00940000160778 ENSGT00390000003140.B.i ENSGT00940000160949 ENSGT00390000003140.B.j.a ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT01100000263539.a.a.b.a.a.a.a.b.a.b Rhesus MODERN SPECIES 6 ENSMMUG00000059344 ENSMMUG00000059974 DAB2IP (ENSMMUG00000004639) #8 STOM (ENSMMUG00000013024) #9 GSN (ENSMMUG00000013020) #10 RAB14 (ENSMMUG00000005595) #11 CNTRL (ENSMMUG00000012668) #12 C5 (ENSMMUG00000020124) #15 TRAF1 (ENSMMUG00000041498) #16 PHF19 (ENSMMUG00000010623) #17 PSMD5 (ENSMMUG00000002213) #18 B3GALT9 (ENSMMUG00000001648) #19 FBXW2 (ENSMMUG00000001646) #20 MEGF9 (ENSMMUG00000015885) #21 ENSMMUG00000051647 CDK5RAP2 (ENSMMUG00000023255) #22 ENSMMUG00000064745 ENSMMUG00000054359 BRINP1 (ENSMMUG00000053277) ENSMMUG00000047263 TLR4 (ENSMMUG00000009112) ASTN2 (ENSMMUG00000013105) ENSMMUG00000065273 TRIM32 (ENSMMUG00000013107) PAPPA (ENSMMUG00000013099) ENSMMUG00000008951 TNC (ENSMMUG00000003356) TNFSF8 (ENSMMUG00000041301) TNFSF15 (ENSMMUG00000012892) ENSMMUG00000059279 TEX48 (ENSMMUG00000064427) Crab-eating macaque MODERN SPECIES 6 DAB2IP (ENSMFAG00000042287) #8 ENSMFAG00000048103 STOM (ENSMFAG00000034207) #9 GSN (ENSMFAG00000045940) #10 ENSMFAG00000046157 RAB14 (ENSMFAG00000047714) #11 CNTRL (ENSMFAG00000001166) #12 C5 (ENSMFAG00000033951) #15 TRAF1 (ENSMFAG00000031255) #16 PHF19 (ENSMFAG00000033849) #17 PSMD5 (ENSMFAG00000003663) #18 B3GALT9 (ENSMFAG00000062661) #19 FBXW2 (ENSMFAG00000039416) #20 MEGF9 (ENSMFAG00000049040) #21 ENSMFAG00000060455 CDK5RAP2 (ENSMFAG00000039120) #22 ENSMFAG00000063472 BRINP1 (ENSMFAG00000003931) ENSMFAG00000065255 ENSMFAG00000058815 BCAS4 (ENSMFAG00000044405) ENSMFAG00000024336 ENSMFAG00000061498 TLR4 (ENSMFAG00000042896) ENSMFAG00000063989 ENSMFAG00000048412 ENSMFAG00000044594 TRIM32 (ENSMFAG00000012352) ENSMFAG00000061748 PAPPA (ENSMFAG00000041618) TNC (ENSMFAG00000001848) Pig-tailed macaque MODERN SPECIES 132 TTLL11 (ENSMNEG00000029622) #7 DAB2IP (ENSMNEG00000005518) #8 ENSMNEG00000018559 STOM (ENSMNEG00000031601) #9 GSN (ENSMNEG00000038101) #10 RAB14 (ENSMNEG00000036774) #11 CNTRL (ENSMNEG00000035354) #12 C5 (ENSMNEG00000009863) #15 TRAF1 (ENSMNEG00000044029) #16 ENSMNEG00000045222 PHF19 (ENSMNEG00000034475) #17 PSMD5 (ENSMNEG00000040372) #18 B3GALT9 (ENSMNEG00000037459) #19 FBXW2 (ENSMNEG00000044488) #20 MEGF9 (ENSMNEG00000024832) #21 CDK5RAP2 (ENSMNEG00000029056) #22 ENSMNEG00000003870 BRINP1 (ENSMNEG00000036641) ENSMNEG00000035991 TLR4 (ENSMNEG00000040713) TRIM32 (ENSMNEG00000011194) ASTN2 (ENSMNEG00000032050) PAPPA (ENSMNEG00000007870) ENSMNEG00000030200 TNC (ENSMNEG00000040676) TNFSF8 (ENSMNEG00000029092) TNFSF15 (ENSMNEG00000026380) TEX48 (ENSMNEG00000021036) TEX53 (ENSMNEG00000038235) TMEM268 (ENSMNEG00000023587) ATP6V1G1 (ENSMNEG00000037013) Vervet Monkey MODERN SPECIES 3 MORN5 (ENSCSAG00000013336) NDUFA8 (ENSCSAG00000013331) TTLL11 (ENSCSAG00000013327) #7 DAB2IP (ENSCSAG00000013322) #8 STOM (ENSCSAG00000013314) #9 ENSCSAG00000013306 GSN (ENSCSAG00000013301) #10 RAB14 (ENSCSAG00000013289) #11 CNTRL (ENSCSAG00000013276) #12 C5 (ENSCSAG00000013241) #15 TRAF1 (ENSCSAG00000013216) #16 PHF19 (ENSCSAG00000013204) #17 PSMD5 (ENSCSAG00000013195) #18 FBXW2 (ENSCSAG00000013184) #20 MEGF9 (ENSCSAG00000013180) #21 CDK5RAP2 (ENSCSAG00000013169) #22 ENSCSAG00000013154 ENSCSAG00000000477 BRINP1 (ENSCSAG00000013146) ENSCSAG00000000476 TLR4 (ENSCSAG00000013135) ASTN2 (ENSCSAG00000013127) TRIM32 (ENSCSAG00000000475) PAPPA (ENSCSAG00000013073) ENSCSAG00000000474 TNC (ENSCSAG00000012989) TNFSF8 (ENSCSAG00000012974) TNFSF15 (ENSCSAG00000012970) TMEM268 (ENSCSAG00000012966) ATP6V1G1 (ENSCSAG00000012954) WHRN (ENSCSAG00000012951) Rhinopithecus ANCESTRAL SPECIES 206 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00910000147835 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016.s #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 Black snub-nosed monkey MODERN SPECIES 761 TTLL11 (ENSRBIG00000043653) #7 DAB2IP (ENSRBIG00000031043) #8 ENSRBIG00000042518 STOM (ENSRBIG00000034040) #9 GSN (ENSRBIG00000009021) #10 RAB14 (ENSRBIG00000036040) #11 ENSRBIG00000040111 CNTRL (ENSRBIG00000035885) #12 C5 (ENSRBIG00000043095) #15 TRAF1 (ENSRBIG00000029358) #16 PHF19 (ENSRBIG00000031930) #17 PSMD5 (ENSRBIG00000032604) #18 B3GALT9 (ENSRBIG00000044210) #19 ENSRBIG00000031532 #20 MEGF9 (ENSRBIG00000037703) #21 CDK5RAP2 (ENSRBIG00000035950) #22 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 190 ENSRROG00000032147 #22 Golden snub-nosed monkey MODERN SPECIES 2952 ENSRROG00000034554 #22 Hominoidea ANCESTRAL SPECIES 19 ENSGT00940000156689 #7 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00910000147463 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b Hominidae ANCESTRAL SPECIES 10 ENSGT00940000156689 #7 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00910000147463 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00950000182981.a ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00390000006051.a.b.a.a.j.a.a ENSGT00940000160778 ENSGT00910000147463 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 Gorilla MODERN SPECIES 22 TTLL11 (ENSGGOG00000000556) #7 DAB2IP (ENSGGOG00000000186) #8 ENSGGOG00000040156 STOM (ENSGGOG00000010215) #9 GSN (ENSGGOG00000010202) #10 RAB14 (ENSGGOG00000027624) #11 CNTRL (ENSGGOG00000000954) #12 C5 (ENSGGOG00000002285) #15 TRAF1 (ENSGGOG00000002284) #16 PHF19 (ENSGGOG00000002281) #17 PSMD5 (ENSGGOG00000005709) #18 B3GALT9 (ENSGGOG00000004852) #19 FBXW2 (ENSGGOG00000007441) #20 ENSGGOG00000025364 MEGF9 (ENSGGOG00000015277) #21 CDK5RAP2 (ENSGGOG00000000178) #22 BRINP1 (ENSGGOG00000005190) ENSGGOG00000042803 ENSGGOG00000043595 ENSGGOG00000037048 ENSGGOG00000042290 TRIM32 (ENSGGOG00000025006) ASTN2 (ENSGGOG00000038795) ENSGGOG00000039057 PAPPA (ENSGGOG00000007107) ENSGGOG00000026862 TNC (ENSGGOG00000010138) TNFSF15 (ENSGGOG00000010814) TEX48 (ENSGGOG00000042957) TEX53 (ENSGGOG00000036380) ENSGGOG00000024486 Homo/Pan group ANCESTRAL SPECIES 16 ENSGT00940000156689 #7 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00390000006051.a.b.a.a.j.a.a ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b Pan ANCESTRAL SPECIES 18 ENSGT00940000156689 #7 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00390000006051.a.b.a.a.j.a.a ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b Chimpanzee MODERN SPECIES 22 TTLL11 (ENSPTRG00000021318) #7 DAB2IP (ENSPTRG00000021317) #8 ENSPTRG00000049018 STOM (ENSPTRG00000021315) #9 GSN (ENSPTRG00000021313) #10 RAB14 (ENSPTRG00000021312) #11 CNTRL (ENSPTRG00000021311) #12 C5 (ENSPTRG00000021309) #15 TRAF1 (ENSPTRG00000021307) #16 PHF19 (ENSPTRG00000044184) #17 PSMD5 (ENSPTRG00000021305) #18 B3GALT9 (ENSPTRG00000046674) #19 FBXW2 (ENSPTRG00000021304) #20 ENSPTRG00000047009 MEGF9 (ENSPTRG00000021303) #21 CDK5RAP2 (ENSPTRG00000021302) #22 BRINP1 (ENSPTRG00000021301) ENSPTRG00000047705 TLR4 (ENSPTRG00000021299) TRIM32 (ENSPTRG00000021298) ASTN2 (ENSPTRG00000021297) ENSPTRG00000046834 PAPPA (ENSPTRG00000021296) ENSPTRG00000021295 TNC (ENSPTRG00000021294) TNFSF8 (ENSPTRG00000021293) TNFSF15 (ENSPTRG00000021292) TEX48 (ENSPTRG00000052346) TEX53 (ENSPTRG00000051173) TMEM268 (ENSPTRG00000021291) ATP6V1G1 (ENSPTRG00000021290) Bonobo MODERN SPECIES 22 TTLL11 (ENSPPAG00000035508) #7 DAB2IP (ENSPPAG00000038874) #8 ENSPPAG00000037253 ENSPPAG00000030402 STOM (ENSPPAG00000033707) #9 GSN (ENSPPAG00000033077) #10 RAB14 (ENSPPAG00000031759) #11 CNTRL (ENSPPAG00000021663) #12 C5 (ENSPPAG00000032861) #15 TRAF1 (ENSPPAG00000041780) #16 PHF19 (ENSPPAG00000041871) #17 PSMD5 (ENSPPAG00000040526) #18 B3GALT9 (ENSPPAG00000018320) #19 FBXW2 (ENSPPAG00000030375) #20 MEGF9 (ENSPPAG00000000986) #21 CDK5RAP2 (ENSPPAG00000039121) #22 BRINP1 (ENSPPAG00000032114) ENSPPAG00000042039 TLR4 (ENSPPAG00000031203) TRIM32 (ENSPPAG00000026037) ASTN2 (ENSPPAG00000030670) ENSPPAG00000022500 PAPPA (ENSPPAG00000031632) ENSPPAG00000043498 TNC (ENSPPAG00000033465) TNFSF8 (ENSPPAG00000043155) TNFSF15 (ENSPPAG00000027793) TEX48 (ENSPPAG00000010613) TEX53 (ENSPPAG00000004001) TMEM268 (ENSPPAG00000038943) ATP6V1G1 (ENSPPAG00000008393) Human MODERN SPECIES 21 NDUFA8 (ENSG00000119421) TTLL11 (ENSG00000175764) #7 DAB2IP (ENSG00000136848) #8 GGTA1 (ENSG00000204136) STOM (ENSG00000148175) #9 GSN (ENSG00000148180) #10 RAB14 (ENSG00000119396) #11 CNTRL (ENSG00000119397) #12 C5 (ENSG00000106804) #15 TRAF1 (ENSG00000056558) #16 PHF19 (ENSG00000119403) #17 PSMD5 (ENSG00000095261) #18 B3GALT9 (ENSG00000214654) #19 FBXW2 (ENSG00000119402) #20 MEGF9 (ENSG00000106780) #21 CDK5RAP2 (ENSG00000136861) #22 BRINP1 (ENSG00000078725) TLR4 (ENSG00000136869) ENSG00000285082 TRIM32 (ENSG00000119401) ASTN2 (ENSG00000148219) PAPPA (ENSG00000182752) TNC (ENSG00000041982) TNFSF8 (ENSG00000106952) TNFSF15 (ENSG00000181634) TEX48 (ENSG00000230601) TEX53 (ENSG00000230054) TMEM268 (ENSG00000157693) ATP6V1G1 (ENSG00000136888) WHRN (ENSG00000095397) AKNA (ENSG00000106948) Orangutan MODERN SPECIES 22 ENSPPYG00000019568 NDUFA8 (ENSPPYG00000038544) TTLL11 (ENSPPYG00000019567) #7 DAB2IP (ENSPPYG00000019566) #8 STOM (ENSPPYG00000033227) #9 GSN (ENSPPYG00000019562) #10 RAB14 (ENSPPYG00000019560) #11 CNTRL (ENSPPYG00000019559) #12 C5 (ENSPPYG00000019558) #15 TRAF1 (ENSPPYG00000019557) #16 PHF19 (ENSPPYG00000019555) #17 PSMD5 (ENSPPYG00000031927) #18 B3GALT9 (ENSPPYG00000019553) #19 FBXW2 (ENSPPYG00000019552) #20 MEGF9 (ENSPPYG00000019551) #21 CDK5RAP2 (ENSPPYG00000019550) #22 BRINP1 (ENSPPYG00000019549) TLR4 (ENSPPYG00000019548) TRIM32 (ENSPPYG00000019547) ASTN2 (ENSPPYG00000019546) ENSPPYG00000019545 PAPPA (ENSPPYG00000019541) ENSPPYG00000019539 ENSPPYG00000040717 TNC (ENSPPYG00000019537) TNFSF8 (ENSPPYG00000019536) TNFSF15 (ENSPPYG00000019535) TEX48 (ENSPPYG00000031957) TEX53 (ENSPPYG00000035421) TMEM268 (ENSPPYG00000019534) ATP6V1G1 (ENSPPYG00000041341) Gibbon DUPLICATION Gibbon MODERN SPECIES 115 ENSNLEG00000032981 ENSNLEG00000032442 #22 ENSNLEG00000027803 ENSNLEG00000031001 ENSNLEG00000028011 Gibbon MODERN SPECIES 23 MORN5 (ENSNLEG00000017165) NDUFA8 (ENSNLEG00000028087) ENSNLEG00000017161 #7 DAB2IP (ENSNLEG00000017155) #8 ENSNLEG00000017145 #9 GSN (ENSNLEG00000017119) #10 RAB14 (ENSNLEG00000017108) #11 CNTRL (ENSNLEG00000017086) #12 C5 (ENSNLEG00000017065) #15 TRAF1 (ENSNLEG00000017050) #16 PHF19 (ENSNLEG00000017037) #17 PSMD5 (ENSNLEG00000017033) #18 B3GALT9 (ENSNLEG00000028723) #19 FBXW2 (ENSNLEG00000017023) #20 MEGF9 (ENSNLEG00000017020) #21 CDK5RAP2 (ENSNLEG00000016932) #22 BRINP1 (ENSNLEG00000016928) ENSNLEG00000036147 TLR4 (ENSNLEG00000034920) TRIM32 (ENSNLEG00000035911) ASTN2 (ENSNLEG00000016901) PAPPA (ENSNLEG00000016883) ENSNLEG00000016881 TNC (ENSNLEG00000016850) TNFSF8 (ENSNLEG00000016848) TNFSF15 (ENSNLEG00000031056) TEX48 (ENSNLEG00000032999) TEX53 (ENSNLEG00000035072) TMEM268 (ENSNLEG00000016837) ATP6V1G1 (ENSNLEG00000016833) WHRN (ENSNLEG00000016829) Platyrrhini ANCESTRAL SPECIES 8 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a Cebidae ANCESTRAL SPECIES 7 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a Marmoset MODERN SPECIES GGTA1 (ENSCJAG00000007103) ENSCJAG00000067069 ENSCJAG00000061240 STOM (ENSCJAG00000020202) #9 ENSCJAG00000020216 #10 ENSCJAG00000073288 RAB14 (ENSCJAG00000042020) #11 CNTRL (ENSCJAG00000020244) #12 C5 (ENSCJAG00000020273) #15 TRAF1 (ENSCJAG00000020298) #16 PHF19 (ENSCJAG00000020305) #17 PSMD5 (ENSCJAG00000020315) #18 B3GALT9 (ENSCJAG00000020329) #19 FBXW2 (ENSCJAG00000020331) #20 MEGF9 (ENSCJAG00000020344) #21 CDK5RAP2 (ENSCJAG00000020351) #22 ENSCJAG00000086032 ENSCJAG00000069952 ENSCJAG00000057446 BRINP1 (ENSCJAG00000020375) ENSCJAG00000068766 TLR4 (ENSCJAG00000065341) ENSCJAG00000074126 ENSCJAG00000086205 TRIM32 (ENSCJAG00000058141) ASTN2 (ENSCJAG00000020386) PAPPA (ENSCJAG00000020401) ENSCJAG00000082558 TNC (ENSCJAG00000020421) TNFSF8 (ENSCJAG00000040124) ENSCJAG00000069955 Cebidae_a ANCESTRAL SPECIES 87 ENSGT00390000008938 ENSGT00940000156689 #7 ENSGT00940000155853 #8 ENSGT00950000182858.B.b.a ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016.v #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.k #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00390000016096 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a Bolivian squirrel monkey MODERN SPECIES 55 TTLL11 (ENSSBOG00000025716) #7 DAB2IP (ENSSBOG00000032859) #8 ENSSBOG00000036093 STOM (ENSSBOG00000018761) #9 GSN (ENSSBOG00000029422) #10 RAB14 (ENSSBOG00000027362) #11 CNTRL (ENSSBOG00000028417) #12 ENSSBOG00000012172 #14 C5 (ENSSBOG00000020243) #15 TRAF1 (ENSSBOG00000031471) #16 PHF19 (ENSSBOG00000033424) #17 PSMD5 (ENSSBOG00000022488) #18 B3GALT9 (ENSSBOG00000023427) #19 FBXW2 (ENSSBOG00000021228) #20 MEGF9 (ENSSBOG00000035302) #21 CDK5RAP2 (ENSSBOG00000023984) #22 BRINP1 (ENSSBOG00000032231) TLR4 (ENSSBOG00000028945) ASTN2 (ENSSBOG00000018765) TRIM32 (ENSSBOG00000019352) PAPPA (ENSSBOG00000032914) ENSSBOG00000034647 ENSSBOG00000034353 TNC (ENSSBOG00000025554) TNFSF8 (ENSSBOG00000021632) TNFSF15 (ENSSBOG00000024382) TEX48 (ENSSBOG00000026046) TEX53 (ENSSBOG00000020208) TMEM268 (ENSSBOG00000022862) ATP6V1G1 (ENSSBOG00000006848) WHRN (ENSSBOG00000029306) Capuchin MODERN SPECIES 309 NDUFA8 (ENSCCAG00000013135) TTLL11 (ENSCCAG00000022642) #7 DAB2IP (ENSCCAG00000025808) #8 ENSCCAG00000027514 STOM (ENSCCAG00000029170) #9 GSN (ENSCCAG00000028764) #10 RAB14 (ENSCCAG00000020267) #11 CNTRL (ENSCCAG00000024994) #12 C5 (ENSCCAG00000024641) #15 TRAF1 (ENSCCAG00000030383) #16 PHF19 (ENSCCAG00000030409) #17 PSMD5 (ENSCCAG00000030433) #18 B3GALT9 (ENSCCAG00000027330) #19 FBXW2 (ENSCCAG00000019152) #20 MEGF9 (ENSCCAG00000029667) #21 CDK5RAP2 (ENSCCAG00000019951) #22 Mas night monkey MODERN SPECIES 768 NDUFA8 (ENSANAG00000030008) TTLL11 (ENSANAG00000022904) #7 DAB2IP (ENSANAG00000022082) #8 ENSANAG00000022384 STOM (ENSANAG00000037888) #9 GSN (ENSANAG00000024960) #10 RAB14 (ENSANAG00000031127) #11 CNTRL (ENSANAG00000037084) #12 C5 (ENSANAG00000031101) #15 TRAF1 (ENSANAG00000024121) #16 PHF19 (ENSANAG00000035406) #17 PSMD5 (ENSANAG00000036700) #18 B3GALT9 (ENSANAG00000027923) #19 FBXW2 (ENSANAG00000029076) #20 MEGF9 (ENSANAG00000023066) #21 CDK5RAP2 (ENSANAG00000032013) #22 BRINP1 (ENSANAG00000026807) Tarsier MODERN SPECIES 1077 RAB14 (ENSTSYG00000014136) #11 CNTRL (ENSTSYG00000006523) #12 C5 (ENSTSYG00000011454) #15 TRAF1 (ENSTSYG00000004542) #16 PHF19 (ENSTSYG00000025776) #17 PSMD5 (ENSTSYG00000010764) #18 B3GALT9 (ENSTSYG00000008118) #19 FBXW2 (ENSTSYG00000008021) #20 MEGF9 (ENSTSYG00000008516) #21 CDK5RAP2 (ENSTSYG00000010385) #22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Pan ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Bonobo MODERN SPECIES 248 ENSPPAG00000028101 ENSPPAG00000033006 ##22 Chimpanzee MODERN SPECIES SLC6A17 (ENSPTRG00000023683) UBL4B (ENSPTRG00000030434) ALX3 (ENSPTRG00000001070) STRIP1 (ENSPTRG00000001069) AHCYL1 (ENSPTRG00000001067) CSF1 (ENSPTRG00000001066) EPS8L3 (ENSPTRG00000001065) ENSPTRG00000042967 GSTM5 (ENSPTRG00000001062) GSTM1 (ENSPTRG00000001061) ENSPTRG00000030424 ENSPTRG00000050199 ENSPTRG00000045351 ENSPTRG00000051930 ENSPTRG00000030794 ENSPTRG00000050992 ##22 ENSPTRG00000046020 ENSPTRG00000023855 ENSPTRG00000047567 ENSPTRG00000047652 ENSPTRG00000046494 ENSPTRG00000051267 FCGR1A (ENSPTRG00000001233) H2BC18 (ENSPTRG00000047357) H3C13 (ENSPTRG00000044185) H4C6 (ENSPTRG00000001238) H2BC21 (ENSPTRG00000050454) H2AC20 (ENSPTRG00000052021) H2AC21 (ENSPTRG00000047219) BOLA1 (ENSPTRG00000001241) SV2A (ENSPTRG00000001242) Gorilla MODERN SPECIES RBM8A (ENSGGOG00000037248) ENSGGOG00000005412 PEX11B (ENSGGOG00000015402) ITGA10 (ENSGGOG00000015407) ANKRD35 (ENSGGOG00000015424) PIAS3 (ENSGGOG00000007266) NUDT17 (ENSGGOG00000007275) POLR3C (ENSGGOG00000007279) RNF115 (ENSGGOG00000007291) ENSGGOG00000024675 ENSGGOG00000037578 ENSGGOG00000038111 ENSGGOG00000040113 ENSGGOG00000043592 ENSGGOG00000024428 ENSGGOG00000002474 ##22 ENSGGOG00000037862 ENSGGOG00000043993 ENSGGOG00000043684 ENSGGOG00000042435 ENSGGOG00000036274 ENSGGOG00000024907 ENSGGOG00000024891 PRKAB2 (ENSGGOG00000021957) ENSGGOG00000004670 FMO5 (ENSGGOG00000009281) ENSGGOG00000039475 CHD1L (ENSGGOG00000001067) ENSGGOG00000025887 BCL9 (ENSGGOG00000009304) ACP6 (ENSGGOG00000003144) Gibbon MODERN SPECIES 290 ENSNLEG00000032282 ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Macaca ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Macaca_a ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.l ##22 Rhesus MODERN SPECIES POLR3GL (ENSMMUG00000016738) HJV (ENSMMUG00000016054) TXNIP (ENSMMUG00000007338) ENSMMUG00000065207 ENSMMUG00000050315 PRKAB2 (ENSMMUG00000012221) CHD1L (ENSMMUG00000009024) FMO5 (ENSMMUG00000000476) BCL9 (ENSMMUG00000016786) ACP6 (ENSMMUG00000013561) GJA5 (ENSMMUG00000001803) GJA8 (ENSMMUG00000001382) ENSMMUG00000056619 ENSMMUG00000057963 ENSMMUG00000048493 ENSMMUG00000062140 ##22 FCGR1A (ENSMMUG00000004362) H2BC18 (ENSMMUG00000040506) H3C13 (ENSMMUG00000054078) H4C14 (ENSMMUG00000052382) H2AC20 (ENSMMUG00000037540) H2AC21 (ENSMMUG00000061036) BOLA1 (ENSMMUG00000007258) SV2A (ENSMMUG00000007257) SF3B4 (ENSMMUG00000007256) MTMR11 (ENSMMUG00000007246) ENSMMUG00000052282 OTUD7B (ENSMMUG00000007244) VPS45 (ENSMMUG00000013673) PLEKHO1 (ENSMMUG00000013681) ANP32E (ENSMMUG00000021531) Strepsirrhini ANCESTRAL SPECIES 8 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040.d #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a Lemuriformes ANCESTRAL SPECIES 12 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178.he #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040.d #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000247665 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b Mouse lemur MODERN SPECIES 1 ENSMICG00000016109 ENSMICG00000015644 STOM (ENSMICG00000037756) #9 GSN (ENSMICG00000003365) #10 ENSMICG00000042093 RAB14 (ENSMICG00000003350) #11 CNTRL (ENSMICG00000003333) #12 ENSMICG00000033615 C5 (ENSMICG00000003316) #15 TRAF1 (ENSMICG00000031076) #16 PHF19 (ENSMICG00000003303) #17 PSMD5 (ENSMICG00000003294) #18 B3GALT9 (ENSMICG00000047545) #19 FBXW2 (ENSMICG00000045875) #20 MEGF9 (ENSMICG00000003283) #21 CDK5RAP2 (ENSMICG00000003259) #22 BRINP1 (ENSMICG00000003249) TLR4 (ENSMICG00000004341) TRIM32 (ENSMICG00000004340) ASTN2 (ENSMICG00000004334) ENSMICG00000043135 PAPPA (ENSMICG00000004317) ENSMICG00000003332 TNC (ENSMICG00000015403) TNFSF8 (ENSMICG00000034609) TNFSF15 (ENSMICG00000015387) TMEM268 (ENSMICG00000015373) ENSMICG00000036232 WHRN (ENSMICG00000015359) AKNA (ENSMICG00000015304) ENSMICG00000015294 Lemuriformes_a ANCESTRAL SPECIES 2 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178.he #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040.d #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000247665 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b Greater bamboo lemur MODERN SPECIES 148 TRAF1 (ENSPSMG00000023911) #16 PHF19 (ENSPSMG00000023898) #17 PSMD5 (ENSPSMG00000023873) #18 B3GALT9 (ENSPSMG00000023849) #19 FBXW2 (ENSPSMG00000023845) #20 MEGF9 (ENSPSMG00000023832) #21 CDK5RAP2 (ENSPSMG00000023437) #22 BRINP1 (ENSPSMG00000022871) TLR4 (ENSPSMG00000022854) ENSPSMG00000022845 TRIM32 (ENSPSMG00000022844) ASTN2 (ENSPSMG00000022824) ENSPSMG00000022776 PAPPA (ENSPSMG00000022769) Coquerels sifaka MODERN SPECIES 995 DAB2IP (ENSPCOG00000021793) #8 ENSPCOG00000023306 STOM (ENSPCOG00000009840) #9 GSN (ENSPCOG00000019861) #10 ENSPCOG00000017682 #11 ENSPCOG00000023370 CNTRL (ENSPCOG00000013483) #12 ENSPCOG00000023470 C5 (ENSPCOG00000027263) #15 TRAF1 (ENSPCOG00000026966) #16 PHF19 (ENSPCOG00000024710) #17 PSMD5 (ENSPCOG00000025684) #18 B3GALT9 (ENSPCOG00000019445) #19 FBXW2 (ENSPCOG00000015155) #20 MEGF9 (ENSPCOG00000027969) #21 CDK5RAP2 (ENSPCOG00000027300) #22 BRINP1 (ENSPCOG00000023195) ENSPCOG00000021467 TLR4 (ENSPCOG00000026664) ASTN2 (ENSPCOG00000019231) ENSPCOG00000006438 ENSPCOG00000026564 ENSPCOG00000025447 PAPPA (ENSPCOG00000015609) ENSPCOG00000000468 ENSPCOG00000022840 Bushbaby MODERN SPECIES 129 ENSOGAG00000029560 ENSOGAG00000002879 #9 GSN (ENSOGAG00000002875) #10 RAB14 (ENSOGAG00000012973) #11 CNTRL (ENSOGAG00000012961) #12 ENSOGAG00000034287 ENSOGAG00000027063 ##15 ENSOGAG00000031991 C5 (ENSOGAG00000027630) #15 ENSOGAG00000031735 TRAF1 (ENSOGAG00000029488) #16 PHF19 (ENSOGAG00000032333) #17 PSMD5 (ENSOGAG00000009843) #18 FBXW2 (ENSOGAG00000009841) #20 MEGF9 (ENSOGAG00000009838) #21 CDK5RAP2 (ENSOGAG00000006300) #22 BRINP1 (ENSOGAG00000006800) TLR4 (ENSOGAG00000017116) ENSOGAG00000029828 ASTN2 (ENSOGAG00000004132) PAPPA (ENSOGAG00000004127) TNC (ENSOGAG00000010431) TNFSF8 (ENSOGAG00000007677) TNFSF15 (ENSOGAG00000012033) TMEM268 (ENSOGAG00000007647) ATP6V1G1 (ENSOGAG00000010103) WHRN (ENSOGAG00000010091) AKNA (ENSOGAG00000010079) ENSOGAG00000010078 ENSOGAG00000016510 KIF12 (ENSOGAG00000014830) Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Tree shrew MODERN SPECIES 1733 MEGF9 (ENSTBEG00000009879) #21 CDK5RAP2 (ENSTBEG00000016795) #22 Glires ANCESTRAL SPECIES 9 ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00960000189501 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Rodentia ANCESTRAL SPECIES 9 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Rodentia_A ANCESTRAL SPECIES 11 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 Hystricomorpha ANCESTRAL SPECIES 7 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b.a ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016.r #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 3 RAB14 (ENSHGLG00000043220) #11 CNTRL (ENSHGLG00000018084) #12 ENSHGLG00000049944 ENSHGLG00000018095 ##15 ENSHGLG00000032382 ##15 ENSHGLG00000019138 ##15 TRAF1 (ENSHGLG00000038643) #16 PHF19 (ENSHGLG00000018816) #17 ENSHGLG00000012715 ENSHGLG00000012966 #18 B3GALT9 (ENSHGLG00000020915) #19 ENSHGLG00000014080 #20 MEGF9 (ENSHGLG00000041787) #21 ENSHGLG00000014515 #22 ENSHGLG00000038376 ENSHGLG00000046150 #22 BRINP1 (ENSHGLG00000032697) ENSHGLG00000043535 TLR4 (ENSHGLG00000014838) ASTN2 (ENSHGLG00000014933) ENSHGLG00000038993 TRIM32 (ENSHGLG00000018840) PAPPA (ENSHGLG00000019341) TNC (ENSHGLG00000019404) TNFSF8 (ENSHGLG00000050949) TNFSF15 (ENSHGLG00000049474) ENSHGLG00000040174 TMEM268 (ENSHGLG00000014124) ENSHGLG00000019108 ENSHGLG00000040119 ENSHGLG00000033853 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000038518 GSN (ENSHGLG00000011340) #10 RAB14 (ENSHGLG00000043220) #11 CNTRL (ENSHGLG00000018084) #12 ENSHGLG00000049944 ENSHGLG00000018095 ##15 ENSHGLG00000032382 ##15 ENSHGLG00000019138 ##15 TRAF1 (ENSHGLG00000038643) #16 PHF19 (ENSHGLG00000018816) #17 ENSHGLG00000012715 ENSHGLG00000012966 #18 B3GALT9 (ENSHGLG00000020915) #19 ENSHGLG00000014080 #20 MEGF9 (ENSHGLG00000041787) #21 ENSHGLG00000014515 #22 ENSHGLG00000038376 ENSHGLG00000046150 #22 BRINP1 (ENSHGLG00000032697) ENSHGLG00000043535 TLR4 (ENSHGLG00000014838) ASTN2 (ENSHGLG00000014933) ENSHGLG00000038993 TRIM32 (ENSHGLG00000018840) PAPPA (ENSHGLG00000019341) TNC (ENSHGLG00000019404) TNFSF8 (ENSHGLG00000050949) TNFSF15 (ENSHGLG00000049474) ENSHGLG00000040174 TMEM268 (ENSHGLG00000014124) ENSHGLG00000019108 Hystricomorpha_a ANCESTRAL SPECIES 5 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b.a ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016.r #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000163466 ENSGT00390000012130 Guinea pig MODERN SPECIES 2 TM2D1 (ENSCPOG00000012287) NFIA (ENSCPOG00000010091) ENSCPOG00000036581 STOM (ENSCPOG00000034024) #9 GSN (ENSCPOG00000008387) #10 RAB14 (ENSCPOG00000036631) #11 CNTRL (ENSCPOG00000006668) #12 C5 (ENSCPOG00000002250) ##15 TRAF1 (ENSCPOG00000037365) #16 PHF19 (ENSCPOG00000002245) #17 ENSCPOG00000033823 PSMD5 (ENSCPOG00000025689) #18 B3GALT9 (ENSCPOG00000021101) #19 FBXW2 (ENSCPOG00000035293) #20 ENSCPOG00000007428 #21 CDK5RAP2 (ENSCPOG00000007408) #22 BRINP1 (ENSCPOG00000006572) TLR4 (ENSCPOG00000015159) ASTN2 (ENSCPOG00000015340) TRIM32 (ENSCPOG00000038367) ENSCPOG00000020032 PAPPA (ENSCPOG00000015335) TNC (ENSCPOG00000003429) TNFSF8 (ENSCPOG00000038240) TNFSF15 (ENSCPOG00000036258) TMEM268 (ENSCPOG00000033795) ATP6V1G1 (ENSCPOG00000031882) WHRN (ENSCPOG00000000760) AKNA (ENSCPOG00000021528) ENSCPOG00000008089 KIF12 (ENSCPOG00000014826) Hystricomorpha_b ANCESTRAL SPECIES 11 ENSGT00950000182858.B.b.a ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b.a ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00930000151016.r #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000163466 ENSGT00940000161216 Long-tailed chinchilla MODERN SPECIES 126 ENSCLAG00000008956 ENSCLAG00000012096 ENSCLAG00000011301 STOM (ENSCLAG00000012162) #9 GSN (ENSCLAG00000009527) #10 RAB14 (ENSCLAG00000009500) #11 CNTRL (ENSCLAG00000010438) #12 ENSCLAG00000016584 ##15 ENSCLAG00000011962 ##15 TRAF1 (ENSCLAG00000010515) #16 PHF19 (ENSCLAG00000013171) #17 ENSCLAG00000013647 PSMD5 (ENSCLAG00000014950) #18 FBXW2 (ENSCLAG00000009481) #20 MEGF9 (ENSCLAG00000013366) #21 CDK5RAP2 (ENSCLAG00000009383) #22 BRINP1 (ENSCLAG00000012906) ENSCLAG00000013260 TLR4 (ENSCLAG00000011591) ASTN2 (ENSCLAG00000010305) TRIM32 (ENSCLAG00000016547) PAPPA (ENSCLAG00000009466) ENSCLAG00000013085 TNC (ENSCLAG00000010182) TNFSF8 (ENSCLAG00000015638) TNFSF15 (ENSCLAG00000013922) TEX48 (ENSCLAG00000017361) TMEM268 (ENSCLAG00000009513) ATP6V1G1 (ENSCLAG00000010372) WHRN (ENSCLAG00000011452) ENSCLAG00000012792 Degu MODERN SPECIES 178 GSN (ENSODEG00000002047) #10 RAB14 (ENSODEG00000002013) #11 ENSODEG00000001951 #12 ENSODEG00000001909 #12 ENSODEG00000001878 #12 ENSODEG00000003131 ENSODEG00000003105 ##15 ENSODEG00000003083 ENSODEG00000003068 ##15 TRAF1 (ENSODEG00000002897) #16 PHF19 (ENSODEG00000002818) #17 ENSODEG00000002750 PSMD5 (ENSODEG00000002717) #18 ENSODEG00000002402 #20 MEGF9 (ENSODEG00000002350) #21 ENSODEG00000004888 #22 ENSODEG00000019092 BRINP1 (ENSODEG00000004869) ENSODEG00000004845 TLR4 (ENSODEG00000004825) TRIM32 (ENSODEG00000004805) ASTN2 (ENSODEG00000004514) Sciuridae ANCESTRAL SPECIES 6 ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 Marmotini ANCESTRAL SPECIES 1 ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 Marmotini_b ANCESTRAL SPECIES 2 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 Squirrel MODERN SPECIES 87 ENSSTOG00000029289 #7 DAB2IP (ENSSTOG00000027582) #8 ENSSTOG00000005448 STOM (ENSSTOG00000005434) #9 GSN (ENSSTOG00000005409) #10 RAB14 (ENSSTOG00000025248) #11 CNTRL (ENSSTOG00000013101) #12 C5 (ENSSTOG00000013078) ##15 TRAF1 (ENSSTOG00000023272) #16 PHF19 (ENSSTOG00000013056) #17 ENSSTOG00000023502 PSMD5 (ENSSTOG00000013046) #18 FBXW2 (ENSSTOG00000027011) #20 ENSSTOG00000022956 ENSSTOG00000013036 #21 CDK5RAP2 (ENSSTOG00000013008) #22 BRINP1 (ENSSTOG00000005376) ENSSTOG00000032177 TLR4 (ENSSTOG00000021892) TRIM32 (ENSSTOG00000020349) ASTN2 (ENSSTOG00000001602) PAPPA (ENSSTOG00000001569) TNC (ENSSTOG00000003382) TNFSF8 (ENSSTOG00000016409) TNFSF15 (ENSSTOG00000022205) TMEM268 (ENSSTOG00000014839) ATP6V1G1 (ENSSTOG00000015857) WHRN (ENSSTOG00000029145) AKNA (ENSSTOG00000010093) ENSSTOG00000012755 ENSSTOG00000010036 Arctic ground squirrel MODERN SPECIES 390 ENSUPAG00010011174 ##15 TRAF1 (ENSUPAG00010011136) #16 PHF19 (ENSUPAG00010011123) #17 ENSUPAG00010011105 PSMD5 (ENSUPAG00010011099) #18 B3GALT9 (ENSUPAG00010011096) #19 FBXW2 (ENSUPAG00010011081) #20 MEGF9 (ENSUPAG00010011071) #21 CDK5RAP2 (ENSUPAG00010011031) #22 BRINP1 (ENSUPAG00010011022) Alpin marmot MODERN SPECIES 47 STOM (ENSMMMG00000018916) #9 ENSMMMG00000018918 GSN (ENSMMMG00000018921) #10 RAB14 (ENSMMMG00000018956) #11 CNTRL (ENSMMMG00000019009) #12 ENSMMMG00000019189 ENSMMMG00000019194 ##15 ENSMMMG00000019210 ##15 TRAF1 (ENSMMMG00000019230) #16 PHF19 (ENSMMMG00000019247) #17 ENSMMMG00000019253 PSMD5 (ENSMMMG00000019264) #18 B3GALT9 (ENSMMMG00000019281) #19 FBXW2 (ENSMMMG00000019287) #20 ENSMMMG00000019361 #21 ENSMMMG00000019367 #22 BRINP1 (ENSMMMG00000000068) TLR4 (ENSMMMG00000000105) ASTN2 (ENSMMMG00000000140) TRIM32 (ENSMMMG00000000348) PAPPA (ENSMMMG00000000360) ENSMMMG00000000409 TNC (ENSMMMG00000000465) TNFSF8 (ENSMMMG00000000689) TNFSF15 (ENSMMMG00000000701) Eurasian red squirrel MODERN SPECIES 6 ENSSVLG00005017485 ENSSVLG00005017429 STOM (ENSSVLG00005017195) #9 GSN (ENSSVLG00005016578) #10 RAB14 (ENSSVLG00005016493) #11 CNTRL (ENSSVLG00005016037) #12 ENSSVLG00005015996 C5 (ENSSVLG00005015629) ##15 TRAF1 (ENSSVLG00005015542) #16 PHF19 (ENSSVLG00005015353) #17 ENSSVLG00005015322 PSMD5 (ENSSVLG00005015258) #18 B3GALT9 (ENSSVLG00005015212) #19 ENSSVLG00005015153 #20 MEGF9 (ENSSVLG00005015074) #21 CDK5RAP2 (ENSSVLG00005014913) #22 BRINP1 (ENSSVLG00005014747) TLR4 (ENSSVLG00005014682) ENSSVLG00005014613 ENSSVLG00005014591 ENSSVLG00005024142 ASTN2 (ENSSVLG00005023911) PAPPA (ENSSVLG00005023757) ENSSVLG00005023740 TNC (ENSSVLG00005022957) ENSSVLG00005022777 TNFSF8 (ENSSVLG00005022734) TNFSF15 (ENSSVLG00005022687) ENSSVLG00005022658 TEX48 (ENSSVLG00005022615) TMEM268 (ENSSVLG00005022567) Rodentia_B ANCESTRAL SPECIES 6 ENSGT00950000182858.B.a.d ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Myomorpha ANCESTRAL SPECIES 1 ENSGT00950000182858.B.a.d ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Muroidea ANCESTRAL SPECIES 1 ENSGT00950000182858.B.a.d ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000156990 ENSGT00530000063926.a ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00390000003343 ENSGT00940000154930 ENSGT00940000158577 ENSGT00520000057958 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000156990 ENSGT00530000063926.a ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00390000003343 ENSGT00940000154930 ENSGT00940000158577 ENSGT00520000057958 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000156990 ENSGT00530000063926.a ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00390000003343 ENSGT00940000154930 ENSGT00940000158577 ENSGT00520000057958 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 11 Nfib (ENSPEMG00000015036) Mpdz (ENSPEMG00000002221) Lurap1l (ENSPEMG00000028913) ENSPEMG00000026523 Tyrp1 (ENSPEMG00000020081) Ptprd (ENSPEMG00000017837) Dmac1 (ENSPEMG00000004174) ENSPEMG00000014283 Kdm4c (ENSPEMG00000009673) Frmd3 (ENSPEMG00000018030) 2310002L09Rik (ENSPEMG00000011897) Rasef (ENSPEMG00000002797) ENSPEMG00000026811 Tle1 (ENSPEMG00000009903) Megf9 (ENSPEMG00000027304) #21 ENSPEMG00000003929 #22 ENSPEMG00000024652 Brinp1 (ENSPEMG00000009863) Tlr4 (ENSPEMG00000001134) ENSPEMG00000012154 Trim32 (ENSPEMG00000017435) Astn2 (ENSPEMG00000013068) Pappa (ENSPEMG00000002320) ENSPEMG00000030479 Tnc (ENSPEMG00000012234) Tnfsf8 (ENSPEMG00000025214) Tex48 (ENSPEMG00000017861) Tmem268 (ENSPEMG00000023755) ENSPEMG00000029329 Whrn (ENSPEMG00000014874) Akna (ENSPEMG00000009954) Northern American deer mouse MODERN SPECIES 3 Map3k7cl (ENSPEMG00000024326) ENSPEMG00000022823 Usp16 (ENSPEMG00000022429) Rwdd2b (ENSPEMG00000016001) Ltn1 (ENSPEMG00000022115) N6amt1 (ENSPEMG00000021354) Adamts5 (ENSPEMG00000022498) Adamts1 (ENSPEMG00000022987) Cyyr1 (ENSPEMG00000028311) App (ENSPEMG00000022232) ENSPEMG00000015204 Gabpa (ENSPEMG00000024152) Atp5j (ENSPEMG00000024756) Jam2 (ENSPEMG00000017592) Mrpl39 (ENSPEMG00000007189) ENSPEMG00000027828 #22 Ncam2 (ENSPEMG00000019436) Tmprss15 (ENSPEMG00000015208) Chodl (ENSPEMG00000013958) D16Ertd472e (ENSPEMG00000013878) Btg3 (ENSPEMG00000016947) Cxadr (ENSPEMG00000000547) Usp25 (ENSPEMG00000017372) Nrip1 (ENSPEMG00000027952) Samsn1 (ENSPEMG00000015859) Hspa13 (ENSPEMG00000011955) ENSPEMG00000029965 ENSPEMG00000026601 Rbm11 (ENSPEMG00000016731) Lipi (ENSPEMG00000008953) Robo2 (ENSPEMG00000016316) Prairie vole MODERN SPECIES 1 Cdk5rap2 (ENSMOCG00000003345) #22 Brinp1 (ENSMOCG00000016073) ENSMOCG00000017660 Tlr4 (ENSMOCG00000018259) Astn2 (ENSMOCG00000021196) ENSMOCG00000000415 Trim32 (ENSMOCG00000001252) Pappa (ENSMOCG00000005782) ENSMOCG00000022793 ENSMOCG00000022675 Tnc (ENSMOCG00000008395) Tnfsf8 (ENSMOCG00000011596) Tnfsf15 (ENSMOCG00000013456) Tex48 (ENSMOCG00000021581) Tmem268 (ENSMOCG00000005493) Atp6v1g1 (ENSMOCG00000006795) Cricetinae ANCESTRAL SPECIES 21 ENSGT00940000156990 ENSGT00530000063926.a ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00390000003343 ENSGT00940000154930 ENSGT00940000158577 ENSGT00520000057958 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 Golden Hamster MODERN SPECIES 668 ENSMAUG00000002744 ENSMAUG00000005197 ENSMAUG00000008911 ENSMAUG00000001298 Frmd3 (ENSMAUG00000003025) Rasef (ENSMAUG00000010820) ENSMAUG00000005147 ENSMAUG00000008740 ENSMAUG00000010052 ENSMAUG00000012433 ENSMAUG00000013202 Megf9 (ENSMAUG00000009827) #21 Cdk5rap2 (ENSMAUG00000011870) #22 Brinp1 (ENSMAUG00000013913) Tlr4 (ENSMAUG00000017099) Astn2 (ENSMAUG00000014793) Trim32 (ENSMAUG00000014286) Pappa (ENSMAUG00000015970) Tnc (ENSMAUG00000019426) ENSMAUG00000000693 Tnfsf8 (ENSMAUG00000004342) Tnfsf15 (ENSMAUG00000000041) Tex48 (ENSMAUG00000000204) Tmem268 (ENSMAUG00000000753) ENSMAUG00000010393 ENSMAUG00000011035 ENSMAUG00000006590 Akna (ENSMAUG00000014945) Chinese hamster chok1gshd MODERN SPECIES 111 Lurap1l (ENSCGRG00001018238) Tyrp1 (ENSCGRG00001020616) Ptprd (ENSCGRG00001001921) Dmac1 (ENSCGRG00001012676) ENSCGRG00001003314 Kdm4c (ENSCGRG00001014973) Frmd3 (ENSCGRG00001020520) ENSCGRG00001022505 2310002L09Rik (ENSCGRG00001024634) Rasef (ENSCGRG00001001324) ENSCGRG00001001298 ENSCGRG00001003137 Tle1 (ENSCGRG00001010603) ENSCGRG00001023328 Megf9 (ENSCGRG00001023864) #21 Cdk5rap2 (ENSCGRG00001010238) #22 Brinp1 (ENSCGRG00001000741) ENSCGRG00001015949 TLR4 (ENSCGRG00001015165) Astn2 (ENSCGRG00001021662) Trim32 (ENSCGRG00001006161) Pappa (ENSCGRG00001024813) ENSCGRG00001006736 Tnc (ENSCGRG00001018791) Tnfsf8 (ENSCGRG00001001108) Tnfsf15 (ENSCGRG00001002029) Tex48 (ENSCGRG00001003062) Tmem268 (ENSCGRG00001006011) Atp6v1g1 (ENSCGRG00001012480) Whrn (ENSCGRG00001018474) Akna (ENSCGRG00001013355) Murinae ANCESTRAL SPECIES 2 ENSGT00530000063926.a ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00390000003343 ENSGT00940000154930 ENSGT00940000158577 ENSGT00520000057958 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT00740000117018 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Mus ANCESTRAL SPECIES 3 ENSGT00530000063926.a ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00390000003343 ENSGT00940000154930 ENSGT00940000158577 ENSGT00520000057958 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT00740000117018 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00940000153112.D.j.c.b.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130.j.b Mus_A ANCESTRAL SPECIES 3 ENSGT00530000063926.a ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00390000003343 ENSGT00940000154930 ENSGT00940000158577.e ENSGT00520000057958.a ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT00740000117018.a.b ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00940000153112.D.j.c.b.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130.j.b Mus_B ANCESTRAL SPECIES 5 ENSGT00530000063926.a ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00390000003343 ENSGT00940000154930 ENSGT00940000158577.e ENSGT00520000057958.a ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT00740000117018.a.b ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00940000153112.D.j.c.b.a.a ENSGT00520000058076 ENSGT00960000192269 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a Mus_C ANCESTRAL SPECIES 2 ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00390000003343 ENSGT00940000154930 ENSGT00940000158577.e ENSGT00520000057958.a ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT00740000117018.a.b ENSGT00740000117018.b ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00940000153112.D.j.c.b.a.a ENSGT00520000058076 ENSGT00960000192269 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a spretus MODERN SPECIES 13 Frem1 (MGP_SPRETEiJ_G0027086) Cer1 (MGP_SPRETEiJ_G0027085) Zdhhc21 (MGP_SPRETEiJ_G0027084) Nfib (MGP_SPRETEiJ_G0027083) Mpdz (MGP_SPRETEiJ_G0027082) Lurap1l (MGP_SPRETEiJ_G0027081) Tyrp1 (MGP_SPRETEiJ_G0027080) MGP_SPRETEiJ_G0027079 Dmac1 (MGP_SPRETEiJ_G0027078) Kdm4c (MGP_SPRETEiJ_G0027077) Frmd3 (MGP_SPRETEiJ_G0027076) MGP_SPRETEiJ_G0027075 Tle1 (MGP_SPRETEiJ_G0027074) MGP_SPRETEiJ_G0027073 Megf9 (MGP_SPRETEiJ_G0027072) #21 Cdk5rap2 (MGP_SPRETEiJ_G0027071) #22 Brinp1 (MGP_SPRETEiJ_G0027070) Tlr4 (MGP_SPRETEiJ_G0027069) Trim32 (MGP_SPRETEiJ_G0027068) Astn2 (MGP_SPRETEiJ_G0027067) Pappa (MGP_SPRETEiJ_G0027066) Tnc (MGP_SPRETEiJ_G0027065) Tnfsf8 (MGP_SPRETEiJ_G0027064) Tnfsf15 (MGP_SPRETEiJ_G0027063) Tex48 (MGP_SPRETEiJ_G0027061) Tmem268 (MGP_SPRETEiJ_G0027060) Atp6v1g1 (MGP_SPRETEiJ_G0027059) Whrn (MGP_SPRETEiJ_G0027057) Akna (MGP_SPRETEiJ_G0027056) Orm1 (MGP_SPRETEiJ_G0027055) Col27a1 (MGP_SPRETEiJ_G0027054) Steppe mouse MODERN SPECIES 3276 Megf9 (ENSMSIG00000016673) #21 Cdk5rap2 (ENSMSIG00000016434) #22 Brinp1 (ENSMSIG00000016408) Tlr4 (ENSMSIG00000016362) Mouse MODERN SPECIES 13 Gm13871 (ENSMUSG00000096333) Gm11757 (ENSMUSG00000096750) Gm11758 (ENSMUSG00000096530) Rasef (ENSMUSG00000043003) Gm428 (ENSMUSG00000095341) Gm11239 (ENSMUSG00000095048) Gm11238 (ENSMUSG00000095935) Gm11236 (ENSMUSG00000096700) Gm11237 (ENSMUSG00000094116) Gm38423 (ENSMUSG00000121585) Gm11487 (ENSMUSG00000066137) Aldoart1 (ENSMUSG00000059343) Tle1 (ENSMUSG00000008305) Gm11232 (ENSMUSG00000066141) Megf9 (ENSMUSG00000039270) #21 Cdk5rap2 (ENSMUSG00000039298) #22 Brinp1 (ENSMUSG00000028351) Tlr4 (ENSMUSG00000039005) Trim32 (ENSMUSG00000051675) Astn2 (ENSMUSG00000028373) Pappa (ENSMUSG00000028370) Tnc (ENSMUSG00000028364) Tnfsf8 (ENSMUSG00000028362) Tnfsf15 (ENSMUSG00000050395) Tex48 (ENSMUSG00000058935) Tex53 (ENSMUSG00000084782) Tmem268 (ENSMUSG00000045917) Atp6v1g1 (ENSMUSG00000039105) Whrn (ENSMUSG00000039137) Akna (ENSMUSG00000039158) Orm2 (ENSMUSG00000061540) Ryukyu mouse MODERN SPECIES 13 Cer1 (MGP_CAROLIEiJ_G0026120) Zdhhc21 (MGP_CAROLIEiJ_G0026119) Nfib (MGP_CAROLIEiJ_G0026118) Mpdz (MGP_CAROLIEiJ_G0026117) Lurap1l (MGP_CAROLIEiJ_G0026116) Tyrp1 (MGP_CAROLIEiJ_G0026115) Ptprd (MGP_CAROLIEiJ_G0026114) Dmac1 (MGP_CAROLIEiJ_G0026113) Kdm4c (MGP_CAROLIEiJ_G0026112) Frmd3 (MGP_CAROLIEiJ_G0026111) 2310002L09Rik (MGP_CAROLIEiJ_G0026110) MGP_CAROLIEiJ_G0026109 Tle1 (MGP_CAROLIEiJ_G0026108) Gm11232 (MGP_CAROLIEiJ_G0026107) Megf9 (MGP_CAROLIEiJ_G0026106) #21 Cdk5rap2 (MGP_CAROLIEiJ_G0026105) #22 Brinp1 (MGP_CAROLIEiJ_G0026104) Tlr4 (MGP_CAROLIEiJ_G0026103) Trim32 (MGP_CAROLIEiJ_G0026102) Astn2 (MGP_CAROLIEiJ_G0026101) Pappa (MGP_CAROLIEiJ_G0026100) Tnc (MGP_CAROLIEiJ_G0026099) Tnfsf8 (MGP_CAROLIEiJ_G0026098) Tnfsf15 (MGP_CAROLIEiJ_G0026097) MGP_CAROLIEiJ_G0026096 Tex48 (MGP_CAROLIEiJ_G0026095) Tmem268 (MGP_CAROLIEiJ_G0026094) Atp6v1g1 (MGP_CAROLIEiJ_G0026093) Whrn (MGP_CAROLIEiJ_G0026092) Akna (MGP_CAROLIEiJ_G0026091) Col27a1 (MGP_CAROLIEiJ_G0026090) Shrew mouse MODERN SPECIES 19 Cer1 (MGP_PahariEiJ_G0028458) Zdhhc21 (MGP_PahariEiJ_G0028457) Nfib (MGP_PahariEiJ_G0028456) MGP_PahariEiJ_G0028455 Lurap1l (MGP_PahariEiJ_G0028454) Tyrp1 (MGP_PahariEiJ_G0028453) Ptprd (MGP_PahariEiJ_G0028452) Dmac1 (MGP_PahariEiJ_G0028451) Kdm4c (MGP_PahariEiJ_G0028450) Frmd3 (MGP_PahariEiJ_G0028449) 2310002L09Rik (MGP_PahariEiJ_G0028448) Rasef (MGP_PahariEiJ_G0028447) Tle1 (MGP_PahariEiJ_G0028446) MGP_PahariEiJ_G0028445 Megf9 (MGP_PahariEiJ_G0028444) #21 Cdk5rap2 (MGP_PahariEiJ_G0028443) #22 Brinp1 (MGP_PahariEiJ_G0028442) Tlr4 (MGP_PahariEiJ_G0028441) Trim32 (MGP_PahariEiJ_G0028440) Astn2 (MGP_PahariEiJ_G0028439) Pappa (MGP_PahariEiJ_G0028438) Tnc (MGP_PahariEiJ_G0028437) Tnfsf8 (MGP_PahariEiJ_G0028436) Tnfsf15 (MGP_PahariEiJ_G0028435) MGP_PahariEiJ_G0028434 MGP_PahariEiJ_G0028433 MGP_PahariEiJ_G0028432 Atp6v1g1 (MGP_PahariEiJ_G0028431) Whrn (MGP_PahariEiJ_G0028430) Akna (MGP_PahariEiJ_G0028429) Orm2 (MGP_PahariEiJ_G0028428) Rat MODERN SPECIES 15 Tyrp1 (ENSRNOG00000029318) ENSRNOG00000065765 RGD1563375 (ENSRNOG00000065031) Snurf-ps2 (ENSRNOG00000022595) Ptprd (ENSRNOG00000005711) Dmac1 (ENSRNOG00000023946) Kdm4c (ENSRNOG00000006644) AABR07048770.1 (ENSRNOG00000031344) Frmd3 (ENSRNOG00000006503) LOC298139 (ENSRNOG00000045733) Rasef (ENSRNOG00000024190) Tle1 (ENSRNOG00000005882) ENSRNOG00000062502 LOC683573 (ENSRNOG00000047928) Megf9 (ENSRNOG00000005932) #21 Cdk5rap2 (ENSRNOG00000005788) #22 ENSRNOG00000063954 Brinp1 (ENSRNOG00000005561) RGD1561195 (ENSRNOG00000030383) ENSRNOG00000062447 Tlr4 (ENSRNOG00000010522) Trim32 (ENSRNOG00000010303) Astn2 (ENSRNOG00000060105) Pappa (ENSRNOG00000033527) Tnc (ENSRNOG00000058645) Tnfsf8 (ENSRNOG00000048321) Tnfsf15 (ENSRNOG00000008930) Tex48 (ENSRNOG00000066054) Tmem268 (ENSRNOG00000008712) Atp6v1g1 (ENSRNOG00000063197) Whrn (ENSRNOG00000001700) Upper Galilee mountains blind mole rat MODERN SPECIES 849 Ttll11 (ENSNGAG00000000046) #7 Dab2ip (ENSNGAG00000018063) #8 Ggta1 (ENSNGAG00000012204) Stom (ENSNGAG00000014217) #9 Gsn (ENSNGAG00000017965) #10 Rab14 (ENSNGAG00000010962) #11 Cntrl (ENSNGAG00000014307) #12 AI182371 (ENSNGAG00000013196) ##15 Hc (ENSNGAG00000018523) ##15 Traf1 (ENSNGAG00000009401) #16 Phf19 (ENSNGAG00000010871) #17 Cutal (ENSNGAG00000011613) Psmd5 (ENSNGAG00000012436) #18 Fbxw2 (ENSNGAG00000013777) #20 Megf9 (ENSNGAG00000015005) #21 ENSNGAG00000015687 #22 ENSNGAG00000016545 Brinp1 (ENSNGAG00000017488) Tlr4 (ENSNGAG00000017664) ENSNGAG00000017979 Astn2 (ENSNGAG00000003335) Trim32 (ENSNGAG00000008019) Pappa (ENSNGAG00000012648) Tnc (ENSNGAG00000019655) Tnfsf8 (ENSNGAG00000011868) Tnfsf15 (ENSNGAG00000012287) Tex48 (ENSNGAG00000012741) Tmem268 (ENSNGAG00000013173) Atp6v1g1 (ENSNGAG00000013488) ENSNGAG00000013834 ENSNGAG00000014308 Lesser Egyptian jerboa MODERN SPECIES 94 Ndufa8 (ENSJJAG00000010110) ENSJJAG00000002583 Dab2ip (ENSJJAG00000002531) #8 ENSJJAG00000019498 ENSJJAG00000000544 ENSJJAG00000000396 4930568D16Rik (ENSJJAG00000023052) ENSJJAG00000003287 Stom (ENSJJAG00000013396) #9 ENSJJAG00000017267 #10 ENSJJAG00000012923 #11 Hc (ENSJJAG00000024103) ##15 Traf1 (ENSJJAG00000011708) #16 Phf19 (ENSJJAG00000012717) #17 ENSJJAG00000000744 #21 Cdk5rap2 (ENSJJAG00000000144) #22 Trim32 (ENSJJAG00000005327) Astn2 (ENSJJAG00000014008) Pappa (ENSJJAG00000008214) Tnc (ENSJJAG00000012783) Tnfsf8 (ENSJJAG00000015286) Tmem268 (ENSJJAG00000019424) ENSJJAG00000017066 ENSJJAG00000015667 Akna (ENSJJAG00000015182) ENSJJAG00000015826 ENSJJAG00000019093 Kif12 (ENSJJAG00000022090) Ambp (ENSJJAG00000017525) Zfp618 (ENSJJAG00000023813) ENSJJAG00000003887 Kangaroo rat MODERN SPECIES 446 4930402F06Rik (ENSDORG00000025317) 4930568D16Rik (ENSDORG00000029499) Stom (ENSDORG00000025310) #9 Gsn (ENSDORG00000015375) #10 Rab14 (ENSDORG00000023851) #11 ENSDORG00000025990 #12 ENSDORG00000023155 #12 ENSDORG00000026355 ENSDORG00000023752 #12 Hc (ENSDORG00000016142) ##15 Traf1 (ENSDORG00000016141) #16 Phf19 (ENSDORG00000009969) #17 Psmd5 (ENSDORG00000006880) #18 Fbxw2 (ENSDORG00000006877) #20 Megf9 (ENSDORG00000011670) #21 ENSDORG00000006667 #22 Brinp1 (ENSDORG00000015057) Tlr4 (ENSDORG00000001288) Astn2 (ENSDORG00000004713) Trim32 (ENSDORG00000004717) Pappa (ENSDORG00000004708) Tnc (ENSDORG00000011878) Tnfsf8 (ENSDORG00000015888) Tnfsf15 (ENSDORG00000015887) ENSDORG00000027780 Tmem268 (ENSDORG00000008244) ENSDORG00000024740 ENSDORG00000025637 ENSDORG00000004004 ENSDORG00000003999 ENSDORG00000008193 Lagomorpha ANCESTRAL SPECIES 16 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.c.a ##15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00390000003140.B ENSGT00390000014541 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 ENSGT00940000167622 Rabbit MODERN SPECIES 432 ENSOCUG00000029536 STOM (ENSOCUG00000005794) #9 ENSOCUG00000029074 GSN (ENSOCUG00000013676) #10 RAB14 (ENSOCUG00000013654) #11 ENSOCUG00000013616 #12 ENSOCUG00000036155 C5 (ENSOCUG00000005673) ##15 TRAF1 (ENSOCUG00000005668) #16 PHF19 (ENSOCUG00000005659) #17 ENSOCUG00000022955 PSMD5 (ENSOCUG00000005644) #18 B3GALT9 (ENSOCUG00000024774) #19 FBXW2 (ENSOCUG00000005638) #20 MEGF9 (ENSOCUG00000009745) #21 CDK5RAP2 (ENSOCUG00000012568) #22 ENSOCUG00000024566 BRINP1 (ENSOCUG00000001373) ENSOCUG00000021402 ENSOCUG00000017167 TLR4 (ENSOCUG00000002216) ENSOCUG00000021237 ASTN2 (ENSOCUG00000000863) TRIM32 (ENSOCUG00000000866) ENSOCUG00000027196 ENSOCUG00000022590 PAPPA (ENSOCUG00000001465) ENSOCUG00000031986 ENSOCUG00000038521 TNC (ENSOCUG00000011500) TNFSF8 (ENSOCUG00000009977) Pika MODERN SPECIES 1442 MEGF9 (ENSOPRG00000015070) #21 CDK5RAP2 (ENSOPRG00000014991) #22 Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000155178 #11 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b Artiodactyla ANCESTRAL SPECIES 7 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b Suina ANCESTRAL SPECIES 23 ENSGT00950000182858.B.b.a ENSGT00950000182858.B.b.b ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Pig MODERN SPECIES ENSSSCG00000005519 ENSSSCG00000005518 ENSSSCG00000038200 STOM (ENSSSCG00000036639) #9 GSN (ENSSSCG00000037508) #10 RAB14 (ENSSSCG00000005514) #11 ENSSSCG00000034749 ENSSSCG00000032297 #12 C5 (ENSSSCG00000005512) #15 TRAF1 (ENSSSCG00000005511) #16 PHF19 (ENSSSCG00000005510) #17 ENSSSCG00000039972 PSMD5 (ENSSSCG00000005507) #18 ENSSSCG00000005508 #20 MEGF9 (ENSSSCG00000005506) #21 CDK5RAP2 (ENSSSCG00000028117) #22 BRINP1 (ENSSSCG00000005504) ENSSSCG00000050756 TLR4 (ENSSSCG00000005503) TRIM32 (ENSSSCG00000005501) ASTN2 (ENSSSCG00000005502) PAPPA (ENSSSCG00000005498) ENSSSCG00000040472 TNC (ENSSSCG00000005494) TNFSF8 (ENSSSCG00000036457) TNFSF15 (ENSSSCG00000059646) TEX48 (ENSSSCG00000042680) ENSSSCG00000048487 TMEM268 (ENSSSCG00000032835) ATP6V1G1 (ENSSSCG00000053522) WHRN (ENSSSCG00000005490) Chacoan peccary MODERN SPECIES 887 DAB2IP (ENSCWAG00000011838) #8 ENSCWAG00000012702 STOM (ENSCWAG00000012794) #9 GSN (ENSCWAG00000012871) #10 RAB14 (ENSCWAG00000013372) #11 CNTRL (ENSCWAG00000013452) #12 ENSCWAG00000013555 C5 (ENSCWAG00000013588) #15 TRAF1 (ENSCWAG00000013928) #16 PHF19 (ENSCWAG00000013993) #17 ENSCWAG00000014116 PSMD5 (ENSCWAG00000014147) #18 B3GALT9 (ENSCWAG00000014199) #19 FBXW2 (ENSCWAG00000014242) #20 MEGF9 (ENSCWAG00000014297) #21 CDK5RAP2 (ENSCWAG00000014361) #22 BRINP1 (ENSCWAG00000014478) ENSCWAG00000014578 TLR4 (ENSCWAG00000014617) ASTN2 (ENSCWAG00000014687) ENSCWAG00000015221 TRIM32 (ENSCWAG00000015252) PAPPA (ENSCWAG00000015279) TNC (ENSCWAG00000015530) TNFSF8 (ENSCWAG00000016085) TNFSF15 (ENSCWAG00000016135) TEX48 (ENSCWAG00000016175) ENSCWAG00000016208 TMEM268 (ENSCWAG00000016240) ATP6V1G1 (ENSCWAG00000016270) WHRN (ENSCWAG00000016307) Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a Cetacea ANCESTRAL SPECIES 9 ENSGT00950000182858.B.b.b ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b.a.a ENSGT00950000183002.B.b ENSGT00940000154254.a Odontoceti ANCESTRAL SPECIES 8 ENSGT00950000182858.B.b.a ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000163712 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b.a.a ENSGT00950000183002.B.b ENSGT00940000154254.a Odontoceti_a ANCESTRAL SPECIES 19 ENSGT00950000182858.B.b.a ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000163712 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b.a.a ENSGT00950000183002.B.b ENSGT00940000154254.a Dolphin MODERN SPECIES 515 MEGF9 (ENSTTRG00000007135) #21 CDK5RAP2 (ENSTTRG00000007077) #22 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00950000182858.B.b.a ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000163712 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT01100000267117 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b Monodontidae ANCESTRAL SPECIES 5 ENSGT00390000012138.a.b.t.bb.a.a.c ENSGT00950000182858.B.b.a ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076.i #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT01010000229684 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT01050000246498 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Beluga whale MODERN SPECIES 19 GLT6D1 (ENSDLEG00000001042) ENSDLEG00000001079 STOM (ENSDLEG00000001088) #9 ENSDLEG00000001099 GSN (ENSDLEG00000001109) #10 RAB14 (ENSDLEG00000001141) #11 CNTRL (ENSDLEG00000001194) #12 C5 (ENSDLEG00000001580) #15 TRAF1 (ENSDLEG00000002554) #16 PHF19 (ENSDLEG00000002567) #17 ENSDLEG00000002615 PSMD5 (ENSDLEG00000002623) #18 B3GALT9 (ENSDLEG00000002636) #19 FBXW2 (ENSDLEG00000002642) #20 ENSDLEG00000002657 #21 CDK5RAP2 (ENSDLEG00000002790) #22 ENSDLEG00000003699 BRINP1 (ENSDLEG00000003707) TLR4 (ENSDLEG00000003711) ASTN2 (ENSDLEG00000003720) TRIM32 (ENSDLEG00000003743) PAPPA (ENSDLEG00000003746) ENSDLEG00000003755 TNC (ENSDLEG00000003775) TNFSF8 (ENSDLEG00000003937) TNFSF15 (ENSDLEG00000003948) TMEM268 (ENSDLEG00000003956) ATP6V1G1 (ENSDLEG00000003962) WHRN (ENSDLEG00000003968) AKNA (ENSDLEG00000003995) ENSDLEG00000004061 Narwhal MODERN SPECIES 312 ENSMMNG00015017437 ENSMMNG00015017403 ENSMMNG00015017352 STOM (ENSMMNG00015017324) #9 GSN (ENSMMNG00015017086) #10 RAB14 (ENSMMNG00015016979) #11 CNTRL (ENSMMNG00015016569) #12 C5 (ENSMMNG00015016137) #15 ENSMMNG00015016064 #16 PHF19 (ENSMMNG00015015955) #17 ENSMMNG00015015930 PSMD5 (ENSMMNG00015015873) #18 B3GALT9 (ENSMMNG00015015830) #19 FBXW2 (ENSMMNG00015015783) #20 MEGF9 (ENSMMNG00015015742) #21 CDK5RAP2 (ENSMMNG00015015531) #22 ENSMMNG00015015436 BRINP1 (ENSMMNG00015015424) TLR4 (ENSMMNG00015015416) ENSMMNG00015015408 TRIM32 (ENSMMNG00015015400) ASTN2 (ENSMMNG00015015350) PAPPA (ENSMMNG00015015281) ENSMMNG00015015258 TNC (ENSMMNG00015015043) TNFSF8 (ENSMMNG00015014956) TNFSF15 (ENSMMNG00015021397) ENSMMNG00015021377 TEX53 (ENSMMNG00015021365) TMEM268 (ENSMMNG00015021356) ATP6V1G1 (ENSMMNG00015021340) Vaquita MODERN SPECIES 17 ENSPSNG00000018878 STOM (ENSPSNG00000018944) #9 ENSPSNG00000018988 GSN (ENSPSNG00000019090) #10 RAB14 (ENSPSNG00000019525) #11 ENSPSNG00000019547 CNTRL (ENSPSNG00000019583) #12 C5 (ENSPSNG00000019713) #15 TRAF1 (ENSPSNG00000019939) #16 PHF19 (ENSPSNG00000020025) #17 ENSPSNG00000020210 PSMD5 (ENSPSNG00000020242) #18 B3GALT9 (ENSPSNG00000020293) #19 FBXW2 (ENSPSNG00000006306) #20 MEGF9 (ENSPSNG00000006352) #21 CDK5RAP2 (ENSPSNG00000006432) #22 BRINP1 (ENSPSNG00000006566) TLR4 (ENSPSNG00000006623) ENSPSNG00000006655 ASTN2 (ENSPSNG00000006713) TRIM32 (ENSPSNG00000006963) PAPPA (ENSPSNG00000007017) TNC (ENSPSNG00000007222) TNFSF8 (ENSPSNG00000007500) TNFSF15 (ENSPSNG00000007546) ENSPSNG00000007589 ENSPSNG00000007620 TEX53 (ENSPSNG00000007664) TMEM268 (ENSPSNG00000007695) ATP6V1G1 (ENSPSNG00000007723) WHRN (ENSPSNG00000007772) Sperm whale MODERN SPECIES 20 ENSPCTG00005015853 #7 ENSPCTG00005015883 GLT6D1 (ENSPCTG00005015920) STOM (ENSPCTG00005015970) #9 GSN (ENSPCTG00005016041) #10 RAB14 (ENSPCTG00005017021) #11 CNTRL (ENSPCTG00005017068) #12 C5 (ENSPCTG00005017275) #15 TRAF1 (ENSPCTG00005017714) #16 PHF19 (ENSPCTG00005017799) #17 ENSPCTG00005017970 PSMD5 (ENSPCTG00005018010) #18 B3GALT9 (ENSPCTG00005018197) #19 FBXW2 (ENSPCTG00005018234) #20 MEGF9 (ENSPCTG00005018316) #21 CDK5RAP2 (ENSPCTG00005018480) #22 BRINP1 (ENSPCTG00005018817) TLR4 (ENSPCTG00005018929) ENSPCTG00005018983 ASTN2 (ENSPCTG00005019024) TRIM32 (ENSPCTG00005019537) PAPPA (ENSPCTG00005019557) TNC (ENSPCTG00005019759) TNFSF15 (ENSPCTG00005020072) TNFSF8 (ENSPCTG00005020119) TEX48 (ENSPCTG00005020141) AKNA (ENSPCTG00005008766) ENSPCTG00005009028 ENSPCTG00005009093 AMBP (ENSPCTG00005009113) RGS3 (ENSPCTG00005009293) Blue whale MODERN SPECIES 17 DAB2IP (ENSBMSG00010000948) #8 ENSBMSG00010000844 ENSBMSG00010000827 STOM (ENSBMSG00010000813) #9 GSN (ENSBMSG00010000706) #10 RAB14 (ENSBMSG00010000641) #11 CNTRL (ENSBMSG00010000534) #12 C5 (ENSBMSG00010000396) #15 TRAF1 (ENSBMSG00010000331) #16 PHF19 (ENSBMSG00010000234) #17 ENSBMSG00010000204 PSMD5 (ENSBMSG00010000145) #18 B3GALT9 (ENSBMSG00010000111) #19 FBXW2 (ENSBMSG00010007806) #20 MEGF9 (ENSBMSG00010007789) #21 CDK5RAP2 (ENSBMSG00010007750) #22 BRINP1 (ENSBMSG00010007711) TLR4 (ENSBMSG00010007701) ENSBMSG00010007690 TRIM32 (ENSBMSG00010007689) ASTN2 (ENSBMSG00010007645) PAPPA (ENSBMSG00010007598) TNC (ENSBMSG00010006915) TNFSF8 (ENSBMSG00010006412) TNFSF15 (ENSBMSG00010006398) TEX48 (ENSBMSG00010006387) TMEM268 (ENSBMSG00010006367) ENSBMSG00010006358 WHRN (ENSBMSG00010006344) AKNA (ENSBMSG00010006314) ENSBMSG00010006287 Pecora ANCESTRAL SPECIES 29 ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Yarkand deer MODERN SPECIES 7 RPS7 (ENSCHYG00000007915) COLEC11 (ENSCHYG00000007787) ALLC (ENSCHYG00000007692) ENSCHYG00000007658 STOM (ENSCHYG00000007578) #9 GSN (ENSCHYG00000006981) #10 RAB14 (ENSCHYG00000006897) #11 CNTRL (ENSCHYG00000006795) #12 C5 (ENSCHYG00000006574) #15 TRAF1 (ENSCHYG00000006498) #16 ENSCHYG00000006468 PSMD5 (ENSCHYG00000006351) #18 B3GALT9 (ENSCHYG00000006325) #19 FBXW2 (ENSCHYG00000006280) #20 MEGF9 (ENSCHYG00000006203) #21 CDK5RAP2 (ENSCHYG00000005783) #22 BRINP1 (ENSCHYG00000005693) TLR4 (ENSCHYG00000005655) ENSCHYG00000005635 TRIM32 (ENSCHYG00000005630) ASTN2 (ENSCHYG00000005434) PAPPA (ENSCHYG00000005268) ENSCHYG00000005231 TNC (ENSCHYG00000004831) TNFSF8 (ENSCHYG00000004746) TNFSF15 (ENSCHYG00000004730) TEX48 (ENSCHYG00000020195) ENSCHYG00000020152 TMEM268 (ENSCHYG00000019932) WHRN (ENSCHYG00000019513) AKNA (ENSCHYG00000019162) Percora_a ANCESTRAL SPECIES 29 ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00960000189501 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Bovidae ANCESTRAL SPECIES 14 ENSGT00390000001793 ENSGT00940000162396 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Bovinae ANCESTRAL SPECIES 14 ENSGT00390000001793 ENSGT00940000162396 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00900000143673 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Bos ANCESTRAL SPECIES 10 ENSGT00940000162396 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00900000143673 ENSGT00940000155178 #11 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.a.a.a ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161216 Bos_b ANCESTRAL SPECIES 37 ENSGT00940000162396 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00900000143673 ENSGT00940000155178 #11 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.a.a.a ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161216 Cow MODERN SPECIES 27 DCDC2C (ENSBTAG00000038489) STOM (ENSBTAG00000038375) #9 GSN (ENSBTAG00000019915) #10 RAB14 (ENSBTAG00000017803) #11 ENSBTAG00000054630 ENSBTAG00000051452 #12 CNTRL (ENSBTAG00000011417) #12 C5 (ENSBTAG00000012210) #15 TRAF1 (ENSBTAG00000003012) #16 PHF19 (ENSBTAG00000016958) #17 CUTAL (ENSBTAG00000048407) PSMD5 (ENSBTAG00000016952) #18 B3GALT9 (ENSBTAG00000038486) #19 FBXW2 (ENSBTAG00000000712) #20 MEGF9 (ENSBTAG00000013706) #21 CDK5RAP2 (ENSBTAG00000006532) #22 BRINP1 (ENSBTAG00000015936) TLR4 (ENSBTAG00000006240) TRIM32 (ENSBTAG00000017155) ASTN2 (ENSBTAG00000025667) PAPPA (ENSBTAG00000004010) TNC (ENSBTAG00000000575) TNFSF8 (ENSBTAG00000025782) TNFSF15 (ENSBTAG00000018069) TMEM268 (ENSBTAG00000000204) ATP6V1G1 (ENSBTAG00000000203) WHRN (ENSBTAG00000010107) AKNA (ENSBTAG00000017306) ORM1 (ENSBTAG00000017294) COL27A1 (ENSBTAG00000019807) KIF12 (ENSBTAG00000015685) Hybrid Bos Indicus MODERN SPECIES 27 GSN (ENSBIXG00005001739) #10 ENSBIXG00005029202 RAB14 (ENSBIXG00005029227) #11 ENSBIXG00005008515 CNTRL (ENSBIXG00005008744) #12 ENSBIXG00005005904 C5 (ENSBIXG00005008855) #15 TRAF1 (ENSBIXG00005000320) #16 PHF19 (ENSBIXG00005008941) #17 ENSBIXG00005008952 ENSBIXG00005008964 PSMD5 (ENSBIXG00005008987) #18 B3GALT9 (ENSBIXG00005008999) #19 FBXW2 (ENSBIXG00005009011) #20 MEGF9 (ENSBIXG00005009022) #21 CDK5RAP2 (ENSBIXG00005009041) #22 BRINP1 (ENSBIXG00005009095) TLR4 (ENSBIXG00005009147) TRIM32 (ENSBIXG00005009179) ASTN2 (ENSBIXG00005005579) PAPPA (ENSBIXG00005009532) ENSBIXG00005000534 TNC (ENSBIXG00005009895) TNFSF8 (ENSBIXG00005009969) TNFSF15 (ENSBIXG00005009984) TMEM268 (ENSBIXG00005000750) ATP6V1G1 (ENSBIXG00005006915) WHRN (ENSBIXG00005010093) AKNA (ENSBIXG00005010148) ENSBIXG00005006990 ENSBIXG00005010188 Bos_a ANCESTRAL SPECIES 20 ENSGT00390000001793 ENSGT00940000162396 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.a.a.a ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00990000212624 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Wild yak MODERN SPECIES 446 CDK5RAP2 (ENSBMUG00000009645) #22 BRINP1 (ENSBMUG00000009550) TLR4 (ENSBMUG00000009529) Domestic yak MODERN SPECIES 26 COLEC11 (ENSBGRG00000013317) ALLC (ENSBGRG00000013195) DCDC2C (ENSBGRG00000013082) STOM (ENSBGRG00000013017) #9 GSN (ENSBGRG00000012611) #10 RAB14 (ENSBGRG00000012507) #11 ENSBGRG00000012493 CNTRL (ENSBGRG00000012248) #12 C5 (ENSBGRG00000011687) #15 TRAF1 (ENSBGRG00000011526) #16 PHF19 (ENSBGRG00000011373) #17 PSMD5 (ENSBGRG00000011189) #18 B3GALT9 (ENSBGRG00000011101) #19 FBXW2 (ENSBGRG00000011027) #20 MEGF9 (ENSBGRG00000010851) #21 CDK5RAP2 (ENSBGRG00000010366) #22 BRINP1 (ENSBGRG00000010303) ENSBGRG00000010274 TLR4 (ENSBGRG00000010229) ENSBGRG00000010209 TRIM32 (ENSBGRG00000010197) ASTN2 (ENSBGRG00000009368) PAPPA (ENSBGRG00000009044) TNC (ENSBGRG00000008389) TNFSF8 (ENSBGRG00000008294) TNFSF15 (ENSBGRG00000008260) TMEM268 (ENSBGRG00000008213) ATP6V1G1 (ENSBGRG00000008186) WHRN (ENSBGRG00000007881) AKNA (ENSBGRG00000007501) ENSBGRG00000007405 American bison MODERN SPECIES 3182 ENSBBBG00000005341 COLEC11 (ENSBBBG00000019693) ALLC (ENSBBBG00000005183) STOM (ENSBBBG00000019655) #9 GSN (ENSBBBG00000019607) #10 RAB14 (ENSBBBG00000019379) #11 CNTRL (ENSBBBG00000019373) #12 C5 (ENSBBBG00000019266) #15 TRAF1 (ENSBBBG00000019235) #16 ENSBBBG00000004957 #17 ENSBBBG00000004953 PSMD5 (ENSBBBG00000004948) #18 B3GALT9 (ENSBBBG00000019184) #19 FBXW2 (ENSBBBG00000019180) #20 MEGF9 (ENSBBBG00000019166) #21 CDK5RAP2 (ENSBBBG00000019130) #22 BRINP1 (ENSBBBG00000004799) TLR4 (ENSBBBG00000018921) Caprinae ANCESTRAL SPECIES 14 ENSGT00390000001793 ENSGT00940000162396 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00900000143673 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Goat MODERN SPECIES 27 ALLC (ENSCHIG00000021445) DCDC2C (ENSCHIG00000025436) STOM (ENSCHIG00000011802) #9 GSN (ENSCHIG00000021305) #10 RAB14 (ENSCHIG00000026983) #11 ENSCHIG00000023328 CNTRL (ENSCHIG00000017058) #12 C5 (ENSCHIG00000011041) #15 TRAF1 (ENSCHIG00000019383) #16 PHF19 (ENSCHIG00000021247) #17 ENSCHIG00000017934 PSMD5 (ENSCHIG00000021228) #18 FBXW2 (ENSCHIG00000020458) #20 MEGF9 (ENSCHIG00000027246) #21 ENSCHIG00000004959 CDK5RAP2 (ENSCHIG00000013746) #22 BRINP1 (ENSCHIG00000010799) TLR4 (ENSCHIG00000018498) ENSCHIG00000016022 ENSCHIG00000010833 TRIM32 (ENSCHIG00000009811) ASTN2 (ENSCHIG00000000737) ENSCHIG00000021499 PAPPA (ENSCHIG00000016958) ENSCHIG00000024042 TNC (ENSCHIG00000020744) TNFSF8 (ENSCHIG00000020113) TNFSF15 (ENSCHIG00000024052) TMEM268 (ENSCHIG00000026416) ATP6V1G1 (ENSCHIG00000015713) WHRN (ENSCHIG00000024837) Siberian musk deer MODERN SPECIES 1264 ENSMMSG00000017447 ENSMMSG00000017408 STOM (ENSMMSG00000017373) #9 GSN (ENSMMSG00000016431) #10 RAB14 (ENSMMSG00000016341) #11 CNTRL (ENSMMSG00000016274) #12 ENSMMSG00000016248 C5 (ENSMMSG00000016059) #15 TRAF1 (ENSMMSG00000016001) #16 PHF19 (ENSMMSG00000015912) #17 ENSMMSG00000015870 PSMD5 (ENSMMSG00000015779) #18 B3GALT9 (ENSMMSG00000015746) #19 FBXW2 (ENSMMSG00000015714) #20 MEGF9 (ENSMMSG00000015701) #21 CDK5RAP2 (ENSMMSG00000015270) #22 BRINP1 (ENSMMSG00000015207) TLR4 (ENSMMSG00000015186) TRIM32 (ENSMMSG00000015172) ASTN2 (ENSMMSG00000014977) PAPPA (ENSMMSG00000014896) TNC (ENSMMSG00000014365) TNFSF8 (ENSMMSG00000014261) TNFSF15 (ENSMMSG00000014226) TMEM268 (ENSMMSG00000014176) ATP6V1G1 (ENSMMSG00000014147) WHRN (ENSMMSG00000014095) AKNA (ENSMMSG00000013893) ENSMMSG00000013847 COL27A1 (ENSMMSG00000013801) KIF12 (ENSMMSG00000013751) Camelidae ANCESTRAL SPECIES 5 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT00410000028274 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Arabian camel MODERN SPECIES 30 ENSCDRG00005010541 STOM (ENSCDRG00005010606) #9 GSN (ENSCDRG00005010665) #10 RAB14 (ENSCDRG00005010819) #11 CNTRL (ENSCDRG00005010958) #12 ENSCDRG00005011667 ENSCDRG00005011689 C5 (ENSCDRG00005011738) #15 TRAF1 (ENSCDRG00005011825) #16 PHF19 (ENSCDRG00005011924) #17 ENSCDRG00005011996 PSMD5 (ENSCDRG00005012041) #18 B3GALT9 (ENSCDRG00005012109) #19 FBXW2 (ENSCDRG00005012142) #20 MEGF9 (ENSCDRG00005012191) #21 CDK5RAP2 (ENSCDRG00005012283) #22 BRINP1 (ENSCDRG00005012875) TLR4 (ENSCDRG00005012955) ENSCDRG00005013005 ENSCDRG00005013038 ENSCDRG00005013199 TRIM32 (ENSCDRG00005013317) PAPPA (ENSCDRG00005013335) TNC (ENSCDRG00005013641) TNFSF8 (ENSCDRG00005014535) TNFSF15 (ENSCDRG00005014580) TEX48 (ENSCDRG00005014625) TEX53 (ENSCDRG00005014666) TMEM268 (ENSCDRG00005014685) ATP6V1G1 (ENSCDRG00005014719) WHRN (ENSCDRG00005014777) Alpaca MODERN SPECIES 620 ENSVPAG00000012578 #17 PSMD5 (ENSVPAG00000012577) #18 FBXW2 (ENSVPAG00000012576) #20 MEGF9 (ENSVPAG00000012575) #21 ENSVPAG00000012574 #22 Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a Laurasiatheria_c ANCESTRAL SPECIES 11 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654.cb ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Chiroptera ANCESTRAL SPECIES 8 ENSGT00950000182858.B.b.a ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654.cb ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 ENSGT00940000162727 Microchiroptera ANCESTRAL SPECIES 7 ENSGT00950000182858.B.b.a ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654.bb ENSGT00940000156654.cb ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Microbat MODERN SPECIES 1024 ENSMLUG00000012248 ENSMLUG00000026642 ENSMLUG00000029606 STOM (ENSMLUG00000000077) #9 GSN (ENSMLUG00000000076) #10 RAB14 (ENSMLUG00000009818) #11 CNTRL (ENSMLUG00000009719) #12 C5 (ENSMLUG00000009610) #15 TRAF1 (ENSMLUG00000005038) #16 PHF19 (ENSMLUG00000005029) #17 ENSMLUG00000026802 PSMD5 (ENSMLUG00000005023) #18 B3GALT9 (ENSMLUG00000025312) #19 FBXW2 (ENSMLUG00000005016) #20 MEGF9 (ENSMLUG00000005011) #21 CDK5RAP2 (ENSMLUG00000004984) #22 BRINP1 (ENSMLUG00000001652) TLR4 (ENSMLUG00000007417) ASTN2 (ENSMLUG00000000769) ENSMLUG00000023977 Greater horseshoe bat MODERN SPECIES 3 ENSRFEG00010018822 ENSRFEG00010018750 STOM (ENSRFEG00010018714) #9 ENSRFEG00010018699 GSN (ENSRFEG00010018558) #10 RAB14 (ENSRFEG00010018494) #11 CNTRL (ENSRFEG00010018360) #12 C5 (ENSRFEG00010018303) #15 TRAF1 (ENSRFEG00010018198) #16 PHF19 (ENSRFEG00010018144) #17 ENSRFEG00010018131 PSMD5 (ENSRFEG00010017941) #18 B3GALT9 (ENSRFEG00010017904) #19 MEGF9 (ENSRFEG00010017819) #21 ENSRFEG00010017793 CDK5RAP2 (ENSRFEG00010017548) #22 BRINP1 (ENSRFEG00010017481) TLR4 (ENSRFEG00010017425) TRIM32 (ENSRFEG00010017405) ASTN2 (ENSRFEG00010016780) TNC (ENSRFEG00010016184) TNFSF8 (ENSRFEG00010016134) TEX48 (ENSRFEG00010016002) TMEM268 (ENSRFEG00010015948) ATP6V1G1 (ENSRFEG00010015908) WHRN (ENSRFEG00010015810) AKNA (ENSRFEG00010015263) ENSRFEG00010015141 ENSRFEG00010015061 AMBP (ENSRFEG00010014933) ZNF618 (ENSRFEG00010014804) Megabat MODERN SPECIES 759 CDK5RAP2 (ENSPVAG00000010871) #22 Equus ANCESTRAL SPECIES 35 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT01030000235151 ENSGT00390000003140.B ENSGT00940000156654.cb ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00910000146849 ENSGT00390000011559 ENSGT00940000154399.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a Horse MODERN SPECIES 17 ENSECAG00000052175 ENSECAG00000021425 ENSECAG00000046249 STOM (ENSECAG00000012929) #9 GSN (ENSECAG00000018714) #10 RAB14 (ENSECAG00000011518) #11 CNTRL (ENSECAG00000022819) #12 ENSECAG00000031073 ##15 ENSECAG00000020296 #15 TRAF1 (ENSECAG00000011454) #16 PHF19 (ENSECAG00000023527) #17 PSMD5 (ENSECAG00000013504) #18 B3GALT9 (ENSECAG00000039067) #19 FBXW2 (ENSECAG00000004604) #20 MEGF9 (ENSECAG00000000134) #21 CDK5RAP2 (ENSECAG00000000135) #22 BRINP1 (ENSECAG00000014683) TLR4 (ENSECAG00000010339) TRIM32 (ENSECAG00000009287) ENSECAG00000050552 ASTN2 (ENSECAG00000001128) PAPPA (ENSECAG00000023026) TNC (ENSECAG00000017433) TNFSF8 (ENSECAG00000014973) TNFSF15 (ENSECAG00000014513) TEX48 (ENSECAG00000048522) TMEM268 (ENSECAG00000013544) ATP6V1G1 (ENSECAG00000037138) ENSECAG00000055768 WHRN (ENSECAG00000019559) ENSECAG00000051821 Donkey MODERN SPECIES 1 ENSEASG00005021134 STOM (ENSEASG00005021140) #9 ENSEASG00005023688 GSN (ENSEASG00005021300) #10 RAB14 (ENSEASG00005032403) #11 CNTRL (ENSEASG00005021925) #12 ENSEASG00005021954 ##15 ENSEASG00005021960 #15 TRAF1 (ENSEASG00005021967) #16 PHF19 (ENSEASG00005021973) #17 ENSEASG00005031556 PSMD5 (ENSEASG00005022001) #18 B3GALT9 (ENSEASG00005028718) #19 FBXW2 (ENSEASG00005022028) #20 MEGF9 (ENSEASG00005022032) #21 CDK5RAP2 (ENSEASG00005022211) #22 BRINP1 (ENSEASG00005022558) ENSEASG00005026899 TLR4 (ENSEASG00005034929) ASTN2 (ENSEASG00005022580) TRIM32 (ENSEASG00005022616) ENSEASG00005022617 PAPPA (ENSEASG00005022619) TNC (ENSEASG00005022621) TNFSF8 (ENSEASG00005036867) TNFSF15 (ENSEASG00005025573) TEX48 (ENSEASG00005022627) ENSEASG00005027692 TMEM268 (ENSEASG00005022629) ENSEASG00005029983 WHRN (ENSEASG00005022634) Carnivora ANCESTRAL SPECIES 18 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Felidae ANCESTRAL SPECIES 16 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Panthera ANCESTRAL SPECIES 11 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Tiger MODERN SPECIES 473 GSN (ENSPTIG00000018431) #10 RAB14 (ENSPTIG00000017871) #11 ENSPTIG00000016709 #12 ENSPTIG00000016218 #12 ENSPTIG00000015659 #12 ENSPTIG00000005679 C5 (ENSPTIG00000015109) #15 TRAF1 (ENSPTIG00000014520) #16 ENSPTIG00000014319 #17 ENSPTIG00000014153 #17 ENSPTIG00000013889 PSMD5 (ENSPTIG00000012775) #18 B3GALT9 (ENSPTIG00000012356) #19 FBXW2 (ENSPTIG00000012158) #20 ENSPTIG00000012024 #21 CDK5RAP2 (ENSPTIG00000006968) #22 BRINP1 (ENSPTIG00000005836) TLR4 (ENSPTIG00000004657) TRIM32 (ENSPTIG00000005562) ASTN2 (ENSPTIG00000021222) PAPPA (ENSPTIG00000020206) TNC (ENSPTIG00000016397) TNFSF8 (ENSPTIG00000016081) TNFSF15 (ENSPTIG00000015697) TEX48 (ENSPTIG00000015586) TMEM268 (ENSPTIG00000014320) ATP6V1G1 (ENSPTIG00000013524) ENSPTIG00000013097 AKNA (ENSPTIG00000007001) ENSPTIG00000006587 COL27A1 (ENSPTIG00000021997) Panthera_a ANCESTRAL SPECIES 10 ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.c.b ##15 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 lion MODERN SPECIES 13 ENSPLOG00000019243 STOM (ENSPLOG00000019321) #9 ENSPLOG00000019359 GSN (ENSPLOG00000019554) #10 RAB14 (ENSPLOG00000020042) #11 CNTRL (ENSPLOG00000020100) #12 ENSPLOG00000020275 ##15 ENSPLOG00000020411 #15 TRAF1 (ENSPLOG00000020655) #16 PHF19 (ENSPLOG00000020712) #17 ENSPLOG00000020788 PSMD5 (ENSPLOG00000020840) #18 B3GALT9 (ENSPLOG00000021018) #19 FBXW2 (ENSPLOG00000021055) #20 MEGF9 (ENSPLOG00000021085) #21 CDK5RAP2 (ENSPLOG00000021346) #22 BRINP1 (ENSPLOG00000021847) TLR4 (ENSPLOG00000021896) ASTN2 (ENSPLOG00000021966) ENSPLOG00000022129 TRIM32 (ENSPLOG00000011226) PAPPA (ENSPLOG00000011378) TNC (ENSPLOG00000011739) TNFSF8 (ENSPLOG00000012930) TNFSF15 (ENSPLOG00000012956) TEX48 (ENSPLOG00000013021) TMEM268 (ENSPLOG00000013088) ATP6V1G1 (ENSPLOG00000013230) WHRN (ENSPLOG00000013249) AKNA (ENSPLOG00000013420) ENSPLOG00000013514 leopard MODERN SPECIES 26 ENSPPRG00000003087 GSN (ENSPPRG00000002264) #10 RAB14 (ENSPPRG00000021393) #11 ENSPPRG00000020520 #12 ENSPPRG00000016404 #12 ENSPPRG00000014897 #12 ENSPPRG00000019119 C5 (ENSPPRG00000012216) #15 TRAF1 (ENSPPRG00000011660) #16 PHF19 (ENSPPRG00000011293) #17 ENSPPRG00000009409 PSMD5 (ENSPPRG00000008369) #18 B3GALT9 (ENSPPRG00000007312) #19 FBXW2 (ENSPPRG00000007216) #20 MEGF9 (ENSPPRG00000007070) #21 CDK5RAP2 (ENSPPRG00000006270) #22 BRINP1 (ENSPPRG00000012950) TLR4 (ENSPPRG00000011574) ASTN2 (ENSPPRG00000011311) TRIM32 (ENSPPRG00000017836) PAPPA (ENSPPRG00000007098) TNC (ENSPPRG00000005061) TNFSF8 (ENSPPRG00000022573) TNFSF15 (ENSPPRG00000022121) TMEM268 (ENSPPRG00000021874) ATP6V1G1 (ENSPPRG00000017247) ENSPPRG00000016634 ENSPPRG00000015226 AKNA (ENSPPRG00000013831) ENSPPRG00000009834 COL27A1 (ENSPPRG00000008394) Cat MODERN SPECIES 244 ENSFCAG00000022798 ENSFCAG00000035681 STOM (ENSFCAG00000029066) #9 GSN (ENSFCAG00000003093) #10 RAB14 (ENSFCAG00000026542) #11 CNTRL (ENSFCAG00000053177) #12 ENSFCAG00000050638 ##15 C5 (ENSFCAG00000000645) #15 TRAF1 (ENSFCAG00000025199) #16 PHF19 (ENSFCAG00000000643) #17 CUTAL (ENSFCAG00000028903) PSMD5 (ENSFCAG00000001313) #18 B3GALT9 (ENSFCAG00000022327) #19 FBXW2 (ENSFCAG00000028736) #20 MEGF9 (ENSFCAG00000033858) #21 CDK5RAP2 (ENSFCAG00000008625) #22 BRINP1 (ENSFCAG00000033056) TLR4 (ENSFCAG00000024741) TRIM32 (ENSFCAG00000002357) ASTN2 (ENSFCAG00000011484) PAPPA (ENSFCAG00000011481) TNC (ENSFCAG00000004938) TNFSF8 (ENSFCAG00000036833) TNFSF15 (ENSFCAG00000000174) TEX48 (ENSFCAG00000043714) TMEM268 (ENSFCAG00000042326) ATP6V1G1 (ENSFCAG00000034121) WHRN (ENSFCAG00000000170) AKNA (ENSFCAG00000000167) ENSFCAG00000000166 COL27A1 (ENSFCAG00000044114) Caniformia ANCESTRAL SPECIES 16 ENSGT00950000182858.B.a.d ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00940000163452 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Canidae ANCESTRAL SPECIES 9 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00940000163452 ENSGT00390000013040 #18 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00390000006922.m.b.a.d.gb ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a Canis_lupus ANCESTRAL SPECIES 15 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00940000163452 ENSGT00390000013040.g #18 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00390000006922.m.b.a.d.gb ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a Dingo MODERN SPECIES 366 ENSCAFG00020009339 ENSCAFG00020009318 STOM (ENSCAFG00020009313) #9 GSN (ENSCAFG00020009296) #10 RAB14 (ENSCAFG00020009287) #11 ENSCAFG00020009261 #12 ENSCAFG00020009206 #12 C5 (ENSCAFG00020009142) #15 TRAF1 (ENSCAFG00020009136) #16 PHF19 (ENSCAFG00020009125) #17 ENSCAFG00020009121 ENSCAFG00020009117 ENSCAFG00020009111 #18 FBXW2 (ENSCAFG00020009109) #20 ENSCAFG00020009096 #21 CDK5RAP2 (ENSCAFG00020006792) #22 ENSCAFG00020006599 BRINP1 (ENSCAFG00020006570) TLR4 (ENSCAFG00020006556) TRIM32 (ENSCAFG00020006549) ASTN2 (ENSCAFG00020006222) ENSCAFG00020006189 PAPPA (ENSCAFG00020006122) ENSCAFG00020006085 TNC (ENSCAFG00020001483) TNFSF8 (ENSCAFG00020001028) TNFSF15 (ENSCAFG00020001018) TMEM268 (ENSCAFG00020000993) ATP6V1G1 (ENSCAFG00020000972) WHRN (ENSCAFG00020000851) AKNA (ENSCAFG00020000767) Dog MODERN SPECIES 2 ENSCAFG00845017046 ENSCAFG00845016999 STOM (ENSCAFG00845016873) #9 GSN (ENSCAFG00845016093) #10 ENSCAFG00845015886 #11 CNTRL (ENSCAFG00845015201) #12 C5 (ENSCAFG00845014898) #15 PHF19 (ENSCAFG00845014785) #17 ENSCAFG00845014747 ENSCAFG00845014733 PSMD5 (ENSCAFG00845014705) #18 FBXW2 (ENSCAFG00845014676) #20 ENSCAFG00845014624 #21 CDK5RAP2 (ENSCAFG00845013104) #22 ENSCAFG00845012206 BRINP1 (ENSCAFG00845012153) ENSCAFG00845012099 TLR4 (ENSCAFG00845012026) TRIM32 (ENSCAFG00845011992) ASTN2 (ENSCAFG00845011765) ENSCAFG00845011725 PAPPA (ENSCAFG00845011656) TNC (ENSCAFG00845010582) TNFSF8 (ENSCAFG00845010341) ENSCAFG00845010304 TEX48 (ENSCAFG00845010268) TMEM268 (ENSCAFG00845010231) ATP6V1G1 (ENSCAFG00845010204) WHRN (ENSCAFG00845009977) Red fox MODERN SPECIES 42 ENSVVUG00000014040 ENSVVUG00000014036 STOM (ENSVVUG00000014017) #9 GSN (ENSVVUG00000012283) #10 RAB14 (ENSVVUG00000012143) #11 CNTRL (ENSVVUG00000012033) #12 C5 (ENSVVUG00000011984) #15 TRAF1 (ENSVVUG00000011973) #16 PHF19 (ENSVVUG00000011956) #17 ENSVVUG00000011955 ENSVVUG00000011953 PSMD5 (ENSVVUG00000011936) #18 FBXW2 (ENSVVUG00000011925) #20 CDK5RAP2 (ENSVVUG00000011768) #22 ENSVVUG00000011718 ENSVVUG00000011714 BRINP1 (ENSVVUG00000011695) TLR4 (ENSVVUG00000011652) ENSVVUG00000011550 ENSVVUG00000011542 TRIM32 (ENSVVUG00000011539) ENSVVUG00000011476 ENSVVUG00000011465 PAPPA (ENSVVUG00000011378) TNC (ENSVVUG00000004215) TNFSF8 (ENSVVUG00000003813) TNFSF15 (ENSVVUG00000003806) ENSVVUG00000003797 TMEM268 (ENSVVUG00000003783) Caniformia_b ANCESTRAL SPECIES 12 ENSGT00950000182858.B.a.d ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00940000163452 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000163466 Ursidae ANCESTRAL SPECIES 6 ENSGT00950000182858.B.a.d ENSGT00390000000223 ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591.d #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00940000163452 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000154451.l ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130.b Ursus ANCESTRAL SPECIES 15 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00390000000223 ENSGT00940000155591.d #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00940000163452 ENSGT00390000013040 #18 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000154451.l ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a American black bear MODERN SPECIES 417 ENSUAMG00000016516 PSMD5 (ENSUAMG00000016508) #18 FBXW2 (ENSUAMG00000016503) #20 MEGF9 (ENSUAMG00000016501) #21 CDK5RAP2 (ENSUAMG00000015600) #22 Polar bear MODERN SPECIES 214 ENSUMAG00000003563 STOM (ENSUMAG00000003570) #9 ENSUMAG00000003574 GSN (ENSUMAG00000003583) #10 RAB14 (ENSUMAG00000003596) #11 CNTRL (ENSUMAG00000003661) #12 C5 (ENSUMAG00000004029) #15 TRAF1 (ENSUMAG00000004059) #16 ENSUMAG00000004066 #17 ENSUMAG00000004071 #17 ENSUMAG00000004077 PSMD5 (ENSUMAG00000004094) #18 ENSUMAG00000004148 FBXW2 (ENSUMAG00000004150) #20 ENSUMAG00000004159 #21 CDK5RAP2 (ENSUMAG00000004170) #22 BRINP1 (ENSUMAG00000004234) ENSUMAG00000004250 TLR4 (ENSUMAG00000004259) ASTN2 (ENSUMAG00000004274) TRIM32 (ENSUMAG00000004376) PAPPA (ENSUMAG00000004386) TNC (ENSUMAG00000004726) TNFSF8 (ENSUMAG00000006767) TNFSF15 (ENSUMAG00000006768) ENSUMAG00000006771 TMEM268 (ENSUMAG00000006775) ENSUMAG00000006780 WHRN (ENSUMAG00000006783) AKNA (ENSUMAG00000006799) Giant Panda MODERN SPECIES 17 ENSAMEG00000000845 ENSAMEG00000000865 ENSAMEG00000027930 STOM (ENSAMEG00000025019) #9 GSN (ENSAMEG00000000895) #10 RAB14 (ENSAMEG00000000968) #11 CNTRL (ENSAMEG00000000983) #12 C5 (ENSAMEG00000001045) #15 TRAF1 (ENSAMEG00000001116) #16 PHF19 (ENSAMEG00000001131) #17 ENSAMEG00000027650 PSMD5 (ENSAMEG00000001195) #18 B3GALT9 (ENSAMEG00000001218) #19 FBXW2 (ENSAMEG00000001220) #20 MEGF9 (ENSAMEG00000001232) #21 CDK5RAP2 (ENSAMEG00000001233) #22 BRINP1 (ENSAMEG00000007274) ENSAMEG00000000098 TLR4 (ENSAMEG00000031378) TRIM32 (ENSAMEG00000019636) ASTN2 (ENSAMEG00000011103) PAPPA (ENSAMEG00000012394) TNC (ENSAMEG00000012406) TNFSF8 (ENSAMEG00000012447) TNFSF15 (ENSAMEG00000012454) TEX53 (ENSAMEG00000023928) TMEM268 (ENSAMEG00000012461) ENSAMEG00000030604 WHRN (ENSAMEG00000012475) AKNA (ENSAMEG00000012522) ENSAMEG00000012556 Mustelinae DUPLICATION Mustelinae ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a.i #22 American mink MODERN SPECIES 738 ENSNVIG00000001937 #22 Mustelinae ANCESTRAL SPECIES 12 ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670.d #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00940000163452 ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a.j #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 American mink MODERN SPECIES 79 ENSNVIG00000010324 ENSNVIG00000010311 STOM (ENSNVIG00000010290) #9 GSN (ENSNVIG00000010103) #10 RAB14 (ENSNVIG00000010068) #11 CNTRL (ENSNVIG00000009871) #12 CO5 (ENSNVIG00000009776) #15 TRAF1 (ENSNVIG00000009755) #16 PHF19 (ENSNVIG00000009709) #17 ENSNVIG00000009701 ENSNVIG00000009694 PSMD5 (ENSNVIG00000009683) #18 B3GALT9 (ENSNVIG00000009673) #19 FBXW2 (ENSNVIG00000009661) #20 ENSNVIG00000009651 #21 CDK5RAP2 (ENSNVIG00000009407) #22 DBC1 (ENSNVIG00000009363) ENSNVIG00000009335 TLR4 (ENSNVIG00000009311) TRIM32 (ENSNVIG00000009305) ASTN2 (ENSNVIG00000009205) PAPPA (ENSNVIG00000009166) TNC (ENSNVIG00000008721) TNFSF8 (ENSNVIG00000008692) TNFSF15 (ENSNVIG00000008675) ENSNVIG00000008660 TEX53 (ENSNVIG00000008655) TMEM268 (ENSNVIG00000008619) ATP6V1G1 (ENSNVIG00000008606) WHRN (ENSNVIG00000008541) AKNA (ENSNVIG00000008424) Ferret MODERN SPECIES 379 ENSMPUG00000007373 ENSMPUG00000007461 ENSMPUG00000007470 STOM (ENSMPUG00000007475) #9 RAB14 (ENSMPUG00000007533) #11 CNTRL (ENSMPUG00000007585) #12 C5 (ENSMPUG00000007615) #15 TRAF1 (ENSMPUG00000007641) #16 PHF19 (ENSMPUG00000007651) #17 ENSMPUG00000007666 ENSMPUG00000019813 PSMD5 (ENSMPUG00000007688) #18 B3GALT9 (ENSMPUG00000007700) #19 FBXW2 (ENSMPUG00000007731) #20 ENSMPUG00000007741 #21 CDK5RAP2 (ENSMPUG00000007752) #22 BRINP1 (ENSMPUG00000007767) Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a #22 Hedgehog MODERN SPECIES 3403 CDK5RAP2 (ENSEEUG00000001140) #22 Common shrew MODERN SPECIES 2561 ENSSARG00000000271 #22 Atlantogenata ANCESTRAL SPECIES 12 ENSGT00950000182858.B.b.a ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670 #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00520000058076 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 Afrotheria ANCESTRAL SPECIES ENSGT00940000155853 #8 ENSGT00940000174010 ENSGT00950000182858.B.b.a ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670 #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00940000154399.a.a.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 Tenrec MODERN SPECIES 3286 CDK5RAP2 (ENSETEG00000008099) #22 Afrotheria_a ANCESTRAL SPECIES ENSGT00940000155853 #8 ENSGT00940000174010 ENSGT00950000182858.B.b.a ENSGT00950000182858.B.b.b ENSGT00950000182858.B.a.d ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670 #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000013040 #18 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161216 Elephant DUPLICATION Elephant MODERN SPECIES 472 DAB2IP (ENSLAFG00000008001) #8 ENSLAFG00000031094 ENSLAFG00000028653 ENSLAFG00000027324 ENSLAFG00000015846 STOM (ENSLAFG00000005769) #9 GSN (ENSLAFG00000005767) #10 RAB14 (ENSLAFG00000005250) #11 CNTRL (ENSLAFG00000005237) #12 C5 (ENSLAFG00000013034) #15 TRAF1 (ENSLAFG00000018541) #16 PHF19 (ENSLAFG00000004865) #17 PSMD5 (ENSLAFG00000004157) #18 FBXW2 (ENSLAFG00000010867) #20 ENSLAFG00000012164 #21 ENSLAFG00000030842 #22 ENSLAFG00000012150 #22 BRINP1 (ENSLAFG00000009223) TLR4 (ENSLAFG00000006775) ASTN2 (ENSLAFG00000014094) TRIM32 (ENSLAFG00000014104) PAPPA (ENSLAFG00000015803) TNC (ENSLAFG00000010541) TNFSF8 (ENSLAFG00000018734) TNFSF15 (ENSLAFG00000013197) TMEM268 (ENSLAFG00000016839) ATP6V1G1 (ENSLAFG00000013437) WHRN (ENSLAFG00000005150) AKNA (ENSLAFG00000005143) ENSLAFG00000000508 ENSLAFG00000013705 Elephant MODERN SPECIES 472 ENSLAFG00000031094 ENSLAFG00000028653 ENSLAFG00000027324 ENSLAFG00000015846 STOM (ENSLAFG00000005769) #9 GSN (ENSLAFG00000005767) #10 RAB14 (ENSLAFG00000005250) #11 CNTRL (ENSLAFG00000005237) #12 C5 (ENSLAFG00000013034) #15 TRAF1 (ENSLAFG00000018541) #16 PHF19 (ENSLAFG00000004865) #17 PSMD5 (ENSLAFG00000004157) #18 FBXW2 (ENSLAFG00000010867) #20 ENSLAFG00000012164 #21 ENSLAFG00000030842 #22 ENSLAFG00000012150 #22 BRINP1 (ENSLAFG00000009223) TLR4 (ENSLAFG00000006775) ASTN2 (ENSLAFG00000014094) TRIM32 (ENSLAFG00000014104) PAPPA (ENSLAFG00000015803) TNC (ENSLAFG00000010541) TNFSF8 (ENSLAFG00000018734) TNFSF15 (ENSLAFG00000013197) TMEM268 (ENSLAFG00000016839) ATP6V1G1 (ENSLAFG00000013437) WHRN (ENSLAFG00000005150) AKNA (ENSLAFG00000005143) ENSLAFG00000000508 ENSLAFG00000013705 ENSLAFG00000007381 Hyrax MODERN SPECIES 2073 SNRPN (ENSPCAG00000006056) CDK5RAP2 (ENSPCAG00000005714) #22 Xenarthra ANCESTRAL SPECIES 637 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 Armadillo MODERN SPECIES 3074 C5 (ENSDNOG00000014163) #15 ENSDNOG00000009014 TRAF1 (ENSDNOG00000048134) #16 PHF19 (ENSDNOG00000015174) #17 ENSDNOG00000042852 B3GALT9 (ENSDNOG00000036805) #19 PSMD5 (ENSDNOG00000009259) #18 ENSDNOG00000009856 #20 ENSDNOG00000033648 MEGF9 (ENSDNOG00000039460) #21 CDK5RAP2 (ENSDNOG00000010028) #22 Sloth MODERN SPECIES 2965 ENSCHOG00000009243 #22 Marsupialia ANCESTRAL SPECIES 9 ENSGT00940000155853 #8 ENSGT00950000182858.B.b ENSGT00950000182858.B.a ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670 #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000161179 ENSGT00520000055634.b Opossum MODERN SPECIES ENSMODG00000038669 ENSMODG00000044331 ENSMODG00000019654 #9 GSN (ENSMODG00000019652) #10 RAB14 (ENSMODG00000019649) #11 CNTRL (ENSMODG00000019643) #12 C5 (ENSMODG00000019641) #15 ENSMODG00000045541 TRAF1 (ENSMODG00000019639) #16 PHF19 (ENSMODG00000044031) #17 ENSMODG00000043271 PSMD5 (ENSMODG00000019635) #18 B3GALT9 (ENSMODG00000019631) #19 FBXW2 (ENSMODG00000019633) #20 MEGF9 (ENSMODG00000019630) #21 CDK5RAP2 (ENSMODG00000019629) #22 TLR4 (ENSMODG00000019614) ENSMODG00000029102 ENSMODG00000023529 ENSMODG00000027910 TRIM32 (ENSMODG00000019608) ASTN2 (ENSMODG00000019604) PAPPA (ENSMODG00000019600) ENSMODG00000039686 ENSMODG00000019598 TNC (ENSMODG00000019592) TNFSF8 (ENSMODG00000019580) ENSMODG00000040008 TMEM268 (ENSMODG00000019578) ATP6V1G1 (ENSMODG00000019574) WHRN (ENSMODG00000019572) Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00940000155853 #8 ENSGT00950000182858.B.b ENSGT00950000182858.B.a ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670 #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00960000186656.b.a.a.b ENSGT00940000153877.e Diprotodontia ANCESTRAL SPECIES 4 ENSGT00940000155853 #8 ENSGT00950000182858.B.b ENSGT00950000182858.B.a ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670 #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00960000186656.b.a.a.b ENSGT00520000055567.a.a.a Wallaby MODERN SPECIES 4334 ENSMEUG00000013303 #22 Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00940000155853 #8 ENSGT00950000182858.B.b ENSGT00950000182858.B.a ENSGT01030000234614.B.a.a.a #9 ENSGT00940000155591 #10 ENSGT00940000155178 #11 ENSGT00940000155434 #12 ENSGT00940000155670 #15 ENSGT00940000161076 #16 ENSGT00950000183180.a.a #17 ENSGT00390000017030.b.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00930000151016 #20 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00960000186656.b.a.a.b ENSGT00940000154891 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1024 ENSVURG00010016761 #7 ENSVURG00010016726 #8 ENSVURG00010016699 ENSVURG00010016666 ENSVURG00010016652 #9 ENSVURG00010016631 #10 ENSVURG00010016614 #11 ENSVURG00010016534 #12 ENSVURG00010016476 #15 ENSVURG00010016451 #16 ENSVURG00010016445 ENSVURG00010016320 #18 B3GALT9 (ENSVURG00010016305) #19 ENSVURG00010016288 #20 ENSVURG00010016274 #21 ENSVURG00010015597 #22 ENSVURG00010015475 ENSVURG00010015464 ENSVURG00010015452 ENSVURG00010015440 ENSVURG00010015115 ENSVURG00010014974 ENSVURG00010014957 ENSVURG00010014868 ENSVURG00010014854 ENSVURG00010014845 ENSVURG00010014835 ENSVURG00010014830 ENSVURG00010014822 ENSVURG00010014810 ENSVURG00010014806 Common wonbat MODERN SPECIES 1024 ENSVURG00010008500 ENSVURG00010008471 #7 ENSVURG00010008376 #8 ENSVURG00010008315 ENSVURG00010008282 ENSVURG00010008252 #9 ENSVURG00010008031 #10 ENSVURG00010008012 #11 ENSVURG00010007943 #12 ENSVURG00010007899 #15 ENSVURG00010007872 #16 ENSVURG00010007864 ENSVURG00010007845 #18 ENSVURG00010007836 #20 ENSVURG00010007802 #21 ENSVURG00010004925 #22 ENSVURG00010004684 ENSVURG00010004648 ENSVURG00010004584 ENSVURG00010004564 ENSVURG00010003853 ENSVURG00010003627 ENSVURG00010003556 ENSVURG00010003384 ENSVURG00010003359 ENSVURG00010003326 ENSVURG00010003307 ENSVURG00010003303 ENSVURG00010003279 ENSVURG00010003207 ENSVURG00010003199 koala MODERN SPECIES 39 ENSPCIG00000025478 ENSPCIG00000025477 STOM (ENSPCIG00000025475) #9 GSN (ENSPCIG00000025472) #10 RAB14 (ENSPCIG00000009235) #11 CNTRL (ENSPCIG00000021402) #12 C5 (ENSPCIG00000021387) #15 TRAF1 (ENSPCIG00000021383) #16 PHF19 (ENSPCIG00000021382) #17 ENSPCIG00000021380 PSMD5 (ENSPCIG00000003764) #18 B3GALT9 (ENSPCIG00000003760) #19 FBXW2 (ENSPCIG00000029190) #20 ENSPCIG00000032636 MEGF9 (ENSPCIG00000033706) #21 CDK5RAP2 (ENSPCIG00000012551) #22 BRINP1 (ENSPCIG00000026013) TLR4 (ENSPCIG00000008960) ASTN2 (ENSPCIG00000008962) TRIM32 (ENSPCIG00000008975) PAPPA (ENSPCIG00000008980) TNC (ENSPCIG00000002358) ENSPCIG00000036418 TNFSF8 (ENSPCIG00000037433) TNFSF15 (ENSPCIG00000002467) TMEM268 (ENSPCIG00000006761) ATP6V1G1 (ENSPCIG00000006760) ENSPCIG00000002487 ENSPCIG00000032310 ENSPCIG00000005624 ENSPCIG00000002593 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000018125 STOM (ENSSHAG00000029833) #9 GSN (ENSSHAG00000017910) #10 RAB14 (ENSSHAG00000017800) #11 CNTRL (ENSSHAG00000017687) #12 C5 (ENSSHAG00000017518) #15 TRAF1 (ENSSHAG00000017403) #16 PHF19 (ENSSHAG00000017325) #17 ENSSHAG00000020629 B3GALT9 (ENSSHAG00000017180) #19 PSMD5 (ENSSHAG00000017196) #18 FBXW2 (ENSSHAG00000017113) #20 ENSSHAG00000017089 ENSSHAG00000017035 MEGF9 (ENSSHAG00000016698) #21 ENSSHAG00000016253 #22 BRINP1 (ENSSHAG00000023667) TLR4 (ENSSHAG00000017208) TRIM32 (ENSSHAG00000022105) ASTN2 (ENSSHAG00000025644) PAPPA (ENSSHAG00000010767) TNC (ENSSHAG00000009497) TNFSF8 (ENSSHAG00000008358) TNFSF15 (ENSSHAG00000006512) TMEM268 (ENSSHAG00000002701) ENSSHAG00000002446 ENSSHAG00000014475 ENSSHAG00000014299 ENSSHAG00000025484 NSFL1C (ENSSHAG00000023578) ENSSHAG00000025220 Platypus MODERN SPECIES 15 AK1 (ENSOANG00000038287) ENSOANG00000015246 ST6GALNAC6 (ENSOANG00000008139) ST6GALNAC4 (ENSOANG00000047012) PIP5KL1 (ENSOANG00000010999) ENSOANG00000040631 EEIG1 (ENSOANG00000040584) NAIF1 (ENSOANG00000051175) SLC25A25 (ENSOANG00000014329) ENSOANG00000035522 ENSOANG00000044966 ENSOANG00000013663 ENSOANG00000013664 ENSOANG00000006934 MEGF9 (ENSOANG00000014651) #21 CDK5RAP2 (ENSOANG00000013317) #22 BRINP1 (ENSOANG00000005071) ENSOANG00000013202 ENSOANG00000013201 TRIM32 (ENSOANG00000002097) ASTN2 (ENSOANG00000002095) PAPPA (ENSOANG00000002094) STXBP1 (ENSOANG00000002090) ENSOANG00000038427 WHRN (ENSOANG00000048340) ENSOANG00000042031 ENSOANG00000010616 TNFSF8 (ENSOANG00000010613) TNC (ENSOANG00000010612) SNTB1 (ENSOANG00000037104) POLE3 (ENSOANG00000039628) Sauria ANCESTRAL SPECIES 22 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a Archelosauria ANCESTRAL SPECIES 28 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a Cryptodira ANCESTRAL SPECIES 42 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000155127 ENSGT00940000154149.a Testudinoidea ANCESTRAL SPECIES 23 ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000155127 ENSGT00940000154149.a Testudinidae ANCESTRAL SPECIES 29 ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT01030000235246 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000155127 ENSGT00940000154149.a Abingdon island giant tortoise MODERN SPECIES 2008 SH2D3C (ENSCABG00000001828) CDK9 (ENSCABG00000001804) FPGS (ENSCABG00000001299) AK1 (ENSCABG00000001261) ENSCABG00000001253 ST6GALNAC6 (ENSCABG00000001251) ST6GALNAC4 (ENSCABG00000001246) PIP5KL1 (ENSCABG00000001242) DPM2 (ENSCABG00000001237) EEIG1 (ENSCABG00000001094) NAIF1 (ENSCABG00000001088) SLC25A25 (ENSCABG00000000350) ENSCABG00000000255 ENSCABG00000017391 MEGF9 (ENSCABG00000017388) #21 CDK5RAP2 (ENSCABG00000017101) #22 BRINP1 (ENSCABG00000017084) TLR4 (ENSCABG00000017083) TRIM32 (ENSCABG00000017081) ASTN2 (ENSCABG00000017052) PAPPA (ENSCABG00000017044) ENSCABG00000017041 ENSCABG00000017040 TNC (ENSCABG00000017039) TNFSF8 (ENSCABG00000017037) TNFSF15 (ENSCABG00000017036) TMEM268 (ENSCABG00000017025) ATP6V1G1 (ENSCABG00000017022) WHRN (ENSCABG00000017020) STXBP1 (ENSCABG00000016862) NIBAN2 (ENSCABG00000016852) Goode s thornscrub tortoise MODERN SPECIES 7 SH2D3C (ENSGEVG00005019120) CDK9 (ENSGEVG00005019101) FPGS (ENSGEVG00005019074) ENG (ENSGEVG00005019048) AK1 (ENSGEVG00005019033) ENSGEVG00005018958 ST6GALNAC6 (ENSGEVG00005018913) ST6GALNAC4 (ENSGEVG00005018898) PIP5KL1 (ENSGEVG00005018877) DPM2 (ENSGEVG00005018839) EEIG1 (ENSGEVG00005018805) NAIF1 (ENSGEVG00005018797) SLC25A25 (ENSGEVG00005018753) ENSGEVG00005018727 MEGF9 (ENSGEVG00005018713) #21 CDK5RAP2 (ENSGEVG00005018602) #22 BRINP1 (ENSGEVG00005018535) TLR4 (ENSGEVG00005018508) TRIM32 (ENSGEVG00005018492) ASTN2 (ENSGEVG00005018380) PAPPA (ENSGEVG00005018262) ENSGEVG00005018230 ENSGEVG00005018213 ENSGEVG00005018188 TNC (ENSGEVG00005018106) TNFSF8 (ENSGEVG00005018065) TNFSF15 (ENSGEVG00005018034) TMEM268 (ENSGEVG00005017993) ATP6V1G1 (ENSGEVG00005017975) WHRN (ENSGEVG00005017903) AKNA (ENSGEVG00005017848) Emydidae ANCESTRAL SPECIES 29 ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000155127 ENSGT00940000154149.a Three-toed box turtle MODERN SPECIES 113 SH2D3C (ENSTMTG00000021687) CDK9 (ENSTMTG00000021656) FPGS (ENSTMTG00000021647) ENG (ENSTMTG00000021637) AK1 (ENSTMTG00000021630) ST6GALNAC6 (ENSTMTG00000021624) ST6GALNAC4 (ENSTMTG00000021621) PIP5KL1 (ENSTMTG00000021616) DPM2 (ENSTMTG00000021609) EEIG1 (ENSTMTG00000021605) NAIF1 (ENSTMTG00000021601) SLC25A25 (ENSTMTG00000021596) ENSTMTG00000021590 ENSTMTG00000021589 MEGF9 (ENSTMTG00000021583) #21 CDK5RAP2 (ENSTMTG00000021540) #22 BRINP1 (ENSTMTG00000021524) TLR4 (ENSTMTG00000021510) TRIM32 (ENSTMTG00000021501) ASTN2 (ENSTMTG00000021474) PAPPA (ENSTMTG00000021459) ENSTMTG00000021450 ENSTMTG00000021445 TNC (ENSTMTG00000021389) TNFSF8 (ENSTMTG00000021374) TNFSF15 (ENSTMTG00000021369) TMEM268 (ENSTMTG00000021361) ATP6V1G1 (ENSTMTG00000021358) WHRN (ENSTMTG00000021309) STXBP1 (ENSTMTG00000020809) NIBAN2 (ENSTMTG00000020741) painted turtle MODERN SPECIES 752 MPP1 (ENSCPBG00000005894) F8 (ENSCPBG00000005930) FUNDC2 (ENSCPBG00000005982) CMC4 (ENSCPBG00000005986) ENSCPBG00000005988 BRCC3 (ENSCPBG00000005992) ENSCPBG00000005997 FAAH2 (ENSCPBG00000006001) ENSCPBG00000006014 CLIC2 (ENSCPBG00000006034) ENSCPBG00000006044 ENSCPBG00000006070 ENSCPBG00000006079 ENSCPBG00000006099 MEGF9 (ENSCPBG00000006154) #21 CDK5RAP2 (ENSCPBG00000006193) #22 ENSCPBG00000006257 BRINP1 (ENSCPBG00000006277) TLR4 (ENSCPBG00000006289) ENSCPBG00000006320 ASTN2 (ENSCPBG00000006339) ENSCPBG00000006350 TRIM32 (ENSCPBG00000006353) PAPPA (ENSCPBG00000006358) ENSCPBG00000006374 TNC (ENSCPBG00000006393) ENSCPBG00000006406 TNFSF8 (ENSCPBG00000006410) TNFSF15 (ENSCPBG00000006416) ENSCPBG00000006423 TMEM268 (ENSCPBG00000006438) Chinese turtle MODERN SPECIES 1529 MEGF9 (ENSPSIG00000003302) #21 CDK5RAP2 (ENSPSIG00000018189) #22 Archosauria ANCESTRAL SPECIES 25 ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a Australian saltwater crocodile MODERN SPECIES 44 SH2D3C (ENSCPRG00005000297) CDK9 (ENSCPRG00005000290) FPGS (ENSCPRG00005000278) ENG (ENSCPRG00005000267) AK1 (ENSCPRG00005000262) ENSCPRG00005000132 ST6GALNAC6 (ENSCPRG00005000106) ST6GALNAC4 (ENSCPRG00005000091) PIP5KL1 (ENSCPRG00005000086) DPM2 (ENSCPRG00005000084) EEIG1 (ENSCPRG00005000074) NAIF1 (ENSCPRG00005013929) SLC25A25 (ENSCPRG00005013925) ENSCPRG00005013923 MEGF9 (ENSCPRG00005013916) #21 CDK5RAP2 (ENSCPRG00005013906) #22 BRINP1 (ENSCPRG00005013899) TLR4 (ENSCPRG00005013883) ENSCPRG00005013880 TRIM32 (ENSCPRG00005013878) ASTN2 (ENSCPRG00005013763) ENSCPRG00005013734 PAPPA (ENSCPRG00005013700) TNC (ENSCPRG00005012447) TNFSF8 (ENSCPRG00005012324) TNFSF15 (ENSCPRG00005012321) TMEM268 (ENSCPRG00005012312) ENSCPRG00005012307 WHRN (ENSCPRG00005012290) AKNA (ENSCPRG00005012276) STXBP1 (ENSCPRG00005012267) Aves ANCESTRAL SPECIES 21 ENSGT00950000182888.a.b ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a Neognathae ANCESTRAL SPECIES 20 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a Neognathae_b ANCESTRAL SPECIES 21 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000155127 ENSGT00940000154149.a Passeriformes ANCESTRAL SPECIES 20 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000155127 ENSGT00940000154149.a ENSGT00940000159996 Great tit MODERN SPECIES 7 SH2D3C (ENSPMJG00000009546) CDK9 (ENSPMJG00000009549) FPGS (ENSPMJG00000009550) ENG (ENSPMJG00000009551) AK1 (ENSPMJG00000009554) ST6GALNAC6 (ENSPMJG00000009556) ST6GALNAC4 (ENSPMJG00000009557) DPM2 (ENSPMJG00000009558) EEIG1 (ENSPMJG00000009561) NAIF1 (ENSPMJG00000009562) SLC25A25 (ENSPMJG00000009563) ENSPMJG00000009569 ENSPMJG00000009570 ENSPMJG00000009573 MEGF9 (ENSPMJG00000009574) #21 CDK5RAP2 (ENSPMJG00000009575) #22 BRINP1 (ENSPMJG00000009578) ENSPMJG00000009579 ENSPMJG00000009605 TLR4 (ENSPMJG00000009620) ASTN2 (ENSPMJG00000009642) TRIM32 (ENSPMJG00000009672) ENSPMJG00000009673 PAPPA (ENSPMJG00000009674) TNC (ENSPMJG00000009696) TNFSF8 (ENSPMJG00000009710) TNFSF15 (ENSPMJG00000009711) TMEM268 (ENSPMJG00000009713) ATP6V1G1 (ENSPMJG00000009714) WHRN (ENSPMJG00000009722) STXBP1 (ENSPMJG00000009726) Passeriformes_d ANCESTRAL SPECIES 20 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000155127 ENSGT00940000154149.a ENSGT00940000159996 Flycatcher MODERN SPECIES 7 TOR2A (ENSFALG00000028744) SH2D3C (ENSFALG00000001345) CDK9 (ENSFALG00000001337) FPGS (ENSFALG00000001332) ENG (ENSFALG00000024453) AK1 (ENSFALG00000001322) ST6GALNAC6 (ENSFALG00000001315) ST6GALNAC4 (ENSFALG00000001309) DPM2 (ENSFALG00000001304) EEIG1 (ENSFALG00000001301) NAIF1 (ENSFALG00000001298) SLC25A25 (ENSFALG00000024332) ENSFALG00000001295 ENSFALG00000001287 MEGF9 (ENSFALG00000023082) #21 CDK5RAP2 (ENSFALG00000001268) #22 ENSFALG00000028418 BRINP1 (ENSFALG00000026163) ENSFALG00000025580 ENSFALG00000027793 ENSFALG00000027983 TLR4 (ENSFALG00000007733) TRIM32 (ENSFALG00000014511) ASTN2 (ENSFALG00000007746) ENSFALG00000027621 PAPPA (ENSFALG00000005308) ENSFALG00000024928 ENSFALG00000025846 TNC (ENSFALG00000005325) TNFSF8 (ENSFALG00000005350) ENSFALG00000023263 Passeriformes_g ANCESTRAL SPECIES 21 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000155127 ENSGT00940000154149.a ENSGT00940000159996 Passeroidea ANCESTRAL SPECIES 21 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000155127 ENSGT00940000154149.a ENSGT00940000159996 Common canary DUPLICATION Common canary DUPLICATION Common canary MODERN SPECIES 22 CDK9 (ENSSCAG00000006447) FPGS (ENSSCAG00000006456) ENG (ENSSCAG00000006498) AK1 (ENSSCAG00000006507) ST6GALNAC6 (ENSSCAG00000006516) ST6GALNAC4 (ENSSCAG00000006520) DPM2 (ENSSCAG00000006528) EEIG1 (ENSSCAG00000006535) NAIF1 (ENSSCAG00000006541) SLC25A25 (ENSSCAG00000006547) ENSSCAG00000006562 ENSSCAG00000006566 ENSSCAG00000006578 MEGF9 (ENSSCAG00000006583) #21 ENSSCAG00000006587 #22 ENSSCAG00000006595 #22 BRINP1 (ENSSCAG00000006620) TLR4 (ENSSCAG00000006623) ASTN2 (ENSSCAG00000006638) TRIM32 (ENSSCAG00000006699) ENSSCAG00000006701 PAPPA (ENSSCAG00000006717) ENSSCAG00000006732 TNC (ENSSCAG00000006781) TNFSF8 (ENSSCAG00000007015) TNFSF15 (ENSSCAG00000007019) TMEM268 (ENSSCAG00000007028) ATP6V1G1 (ENSSCAG00000007066) WHRN (ENSSCAG00000007071) STXBP1 (ENSSCAG00000007077) NIBAN2 (ENSSCAG00000007083) Common canary MODERN SPECIES 126 ENSSCAG00000015575 #22 ENSSCAG00000015581 ##22 ENSSCAG00000015586 ##22 PRKAB2 (ENSSCAG00000015591) ENSSCAG00000015604 ENSSCAG00000015623 PLPP6 (ENSSCAG00000015642) FAM78B (ENSSCAG00000015648) PRDX6 (ENSSCAG00000015649) TADA1 (ENSSCAG00000015651) Common canary MODERN SPECIES 22 SH2D3C (ENSSCAG00000006435) CDK9 (ENSSCAG00000006447) FPGS (ENSSCAG00000006456) ENG (ENSSCAG00000006498) AK1 (ENSSCAG00000006507) ST6GALNAC6 (ENSSCAG00000006516) ST6GALNAC4 (ENSSCAG00000006520) DPM2 (ENSSCAG00000006528) EEIG1 (ENSSCAG00000006535) NAIF1 (ENSSCAG00000006541) SLC25A25 (ENSSCAG00000006547) ENSSCAG00000006562 ENSSCAG00000006566 ENSSCAG00000006578 MEGF9 (ENSSCAG00000006583) #21 ENSSCAG00000006587 #22 ENSSCAG00000006595 #22 BRINP1 (ENSSCAG00000006620) TLR4 (ENSSCAG00000006623) ASTN2 (ENSSCAG00000006638) TRIM32 (ENSSCAG00000006699) ENSSCAG00000006701 PAPPA (ENSSCAG00000006717) ENSSCAG00000006732 TNC (ENSSCAG00000006781) TNFSF8 (ENSSCAG00000007015) TNFSF15 (ENSSCAG00000007019) TMEM268 (ENSSCAG00000007028) ATP6V1G1 (ENSSCAG00000007066) WHRN (ENSSCAG00000007071) STXBP1 (ENSSCAG00000007077) Zebra finch MODERN SPECIES 8 PTRH1 (ENSTGUG00000003648) TOR2A (ENSTGUG00000003633) SH2D3C (ENSTGUG00000003600) CDK9 (ENSTGUG00000003597) FPGS (ENSTGUG00000003578) ENG (ENSTGUG00000003570) AK1 (ENSTGUG00000003559) ST6GALNAC6 (ENSTGUG00000003556) ST6GALNAC4 (ENSTGUG00000003554) DPM2 (ENSTGUG00000025652) EEIG1 (ENSTGUG00000024590) NAIF1 (ENSTGUG00000003526) SLC25A25 (ENSTGUG00000003504) ENSTGUG00000003499 ENSTGUG00000003398 CDK5RAP2 (ENSTGUG00000003376) #22 ENSTGUG00000020227 BRINP1 (ENSTGUG00000003350) ENSTGUG00000021720 TLR4 (ENSTGUG00000003342) TRIM32 (ENSTGUG00000003326) ASTN2 (ENSTGUG00000003291) ENSTGUG00000028709 PAPPA (ENSTGUG00000003260) TNC (ENSTGUG00000003200) TNFSF8 (ENSTGUG00000003196) TNFSF15 (ENSTGUG00000003190) TMEM268 (ENSTGUG00000003185) ATP6V1G1 (ENSTGUG00000003183) WHRN (ENSTGUG00000003170) STXBP1 (ENSTGUG00000003117) Medium ground finch MODERN SPECIES 32 TOR2A (ENSGFOG00000004206) SH2D3C (ENSGFOG00000004224) CDK9 (ENSGFOG00000004255) FPGS (ENSGFOG00000004292) ENG (ENSGFOG00000004359) AK1 (ENSGFOG00000004370) ST6GALNAC6 (ENSGFOG00000004385) ST6GALNAC4 (ENSGFOG00000004400) DPM2 (ENSGFOG00000004418) EEIG1 (ENSGFOG00000004439) SLC25A25 (ENSGFOG00000004460) ENSGFOG00000004501 ENSGFOG00000004533 ENSGFOG00000004564 MEGF9 (ENSGFOG00000004581) #21 CDK5RAP2 (ENSGFOG00000004601) #22 Neognathae_c ANCESTRAL SPECIES 25 ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000155127 ENSGT00940000154149.a Kakapo MODERN SPECIES 9 TOR2A (ENSSHBG00005016385) SH2D3C (ENSSHBG00005016399) CDK9 (ENSSHBG00005016419) FPGS (ENSSHBG00005016431) ENG (ENSSHBG00005016442) AK1 (ENSSHBG00005016449) ST6GALNAC6 (ENSSHBG00005016454) ST6GALNAC4 (ENSSHBG00005016465) DPM2 (ENSSHBG00005016469) EEIG1 (ENSSHBG00005016473) NAIF1 (ENSSHBG00005016475) SLC25A25 (ENSSHBG00005016479) ENSSHBG00005016485 ENSSHBG00005016492 MEGF9 (ENSSHBG00005016502) #21 CDK5RAP2 (ENSSHBG00005016529) #22 BRINP1 (ENSSHBG00005016585) TLR4 (ENSSHBG00005016595) ASTN2 (ENSSHBG00005016608) TRIM32 (ENSSHBG00005016616) ENSSHBG00005016624 PAPPA (ENSSHBG00005016630) TNC (ENSSHBG00005016653) ENSSHBG00005016681 TNFSF8 (ENSSHBG00005016685) TNFSF15 (ENSSHBG00005016687) TMEM268 (ENSSHBG00005016692) ATP6V1G1 (ENSSHBG00005016702) WHRN (ENSSHBG00005016707) ENSSHBG00005016712 STXBP1 (ENSSHBG00005016724) Golden eagle MODERN SPECIES 16 TOR2A (ENSACCG00020016996) CDK9 (ENSACCG00020016995) FPGS (ENSACCG00020016994) ENG (ENSACCG00020016993) AK1 (ENSACCG00020016992) ST6GALNAC6 (ENSACCG00020016991) ST6GALNAC4 (ENSACCG00020016990) DPM2 (ENSACCG00020016989) EEIG1 (ENSACCG00020016988) NAIF1 (ENSACCG00020016987) SLC25A25 (ENSACCG00020016986) SH2D3C (ENSACCG00020016982) ENSACCG00020016979 ENSACCG00020016977 MEGF9 (ENSACCG00020016976) #21 CDK5RAP2 (ENSACCG00020016975) #22 BRINP1 (ENSACCG00020016973) TLR4 (ENSACCG00020016972) TRIM32 (ENSACCG00020016971) ASTN2 (ENSACCG00020016970) ENSACCG00020016969 PAPPA (ENSACCG00020016968) TNC (ENSACCG00020016967) TNFSF8 (ENSACCG00020016966) TNFSF15 (ENSACCG00020016965) TMEM268 (ENSACCG00020016964) ATP6V1G1 (ENSACCG00020016963) WHRN (ENSACCG00020016962) STXBP1 (ENSACCG00020016960) NIBAN2 (ENSACCG00020016959) SLC31A2 (ENSACCG00020016958) Galloanserae ANCESTRAL SPECIES 22 ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000155127 Anatidae ANCESTRAL SPECIES 13 ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000162727 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000155127 Duck MODERN SPECIES 8 SLC27A4 (ENSAPLG00000008614) URM1 (ENSAPLG00000008603) CERCAM (ENSAPLG00000023317) TOR2A (ENSAPLG00000021882) SH2D3C (ENSAPLG00000007801) CDK9 (ENSAPLG00000021148) DPM2 (ENSAPLG00000001324) EEIG1 (ENSAPLG00000001915) NAIF1 (ENSAPLG00000002142) SLC25A25 (ENSAPLG00000002420) ENSAPLG00000030898 ENSAPLG00000030664 ENSAPLG00000030226 ENSAPLG00000022704 MEGF9 (ENSAPLG00000031052) #21 CDK5RAP2 (ENSAPLG00000006791) #22 BRINP1 (ENSAPLG00000006140) TLR4 (ENSAPLG00000012625) ENSAPLG00000012762 TRIM32 (ENSAPLG00000017941) ASTN2 (ENSAPLG00000012315) PAPPA (ENSAPLG00000014198) TNC (ENSAPLG00000014515) TNFSF8 (ENSAPLG00000018893) TNFSF15 (ENSAPLG00000015357) TMEM268 (ENSAPLG00000015381) ENSAPLG00000021787 WHRN (ENSAPLG00000024736) ENSAPLG00000024372 NIBAN2 (ENSAPLG00000011287) ENSAPLG00000001847 Pink-footed goose MODERN SPECIES 8 TOR2A (ENSABRG00000000799) SH2D3C (ENSABRG00000000726) CDK9 (ENSABRG00000000658) ENSABRG00000000635 AK1 (ENSABRG00000000631) ST6GALNAC6 (ENSABRG00000000627) ST6GALNAC4 (ENSABRG00000000620) DPM2 (ENSABRG00000000605) EEIG1 (ENSABRG00000000591) NAIF1 (ENSABRG00000000587) SLC25A25 (ENSABRG00000000554) ENSABRG00000000541 ENSABRG00000000467 ENSABRG00000022923 MEGF9 (ENSABRG00000022921) #21 CDK5RAP2 (ENSABRG00000022920) #22 BRINP1 (ENSABRG00000022915) TLR4 (ENSABRG00000022910) ENSABRG00000022909 ASTN2 (ENSABRG00000022905) ENSABRG00000022904 PAPPA (ENSABRG00000022903) TNC (ENSABRG00000022897) TNFSF8 (ENSABRG00000022895) TNFSF15 (ENSABRG00000022892) TMEM268 (ENSABRG00000022890) ATP6V1G1 (ENSABRG00000022888) WHRN (ENSABRG00000022887) STXBP1 (ENSABRG00000022884) NIBAN2 (ENSABRG00000022879) ENSABRG00000022878 Phasianidae ANCESTRAL SPECIES 20 ENSGT00950000182888.a.b ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000162727 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000155127 Phasianidae_b ANCESTRAL SPECIES 19 ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00390000012130 ENSGT00940000167228 ENSGT00940000167622 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00940000160949 ENSGT00390000003140.B ENSGT01030000235151 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a ENSGT00940000155127 Chicken MODERN SPECIES 8 SH2D3C (ENSGALG00010029143) CDK9 (ENSGALG00010028095) FPGS (ENSGALG00010028091) ENG (ENSGALG00010028084) AK1 (ENSGALG00010028082) ST6GALNAC6 (ENSGALG00010028076) ST6GALNAC4 (ENSGALG00010028073) DPM2 (ENSGALG00010028071) FAM102A (ENSGALG00010028067) NAIF1 (ENSGALG00010028061) SLC25A25 (ENSGALG00010028056) ORM1 (ENSGALG00010028053) ENSGALG00010028052 ENSGALG00010029149 ENSGALG00010028909 #21 CDK5RAP2 (ENSGALG00010027929) #22 BRINP1 (ENSGALG00010028193) TLR4 (ENSGALG00010028914) ENSGALG00010028913 TRIM32 (ENSGALG00010028904) ASTN2 (ENSGALG00010028903) ENSGALG00010028902 PAPPA (ENSGALG00010028901) TNC (ENSGALG00010028900) TNFSF8 (ENSGALG00010028899) TNFSF15 (ENSGALG00010028898) TMEM268 (ENSGALG00010028897) ATP6V1G1 (ENSGALG00010028896) WHRN (ENSGALG00010028895) AKNA (ENSGALG00010028894) STXBP1 (ENSGALG00010028893) Turkey MODERN SPECIES 10 SH2D3C (ENSMGAG00000003752) CDK9 (ENSMGAG00000003747) FPGS (ENSMGAG00000003714) ENSMGAG00000022597 ENG (ENSMGAG00000003658) AK1 (ENSMGAG00000021319) ST6GALNAC6 (ENSMGAG00000003642) ST6GALNAC4 (ENSMGAG00000003621) DPM2 (ENSMGAG00000003615) EEIG1 (ENSMGAG00000003587) NAIF1 (ENSMGAG00000003576) SLC25A25 (ENSMGAG00000003552) ENSMGAG00000003544 ENSMGAG00000022556 ENSMGAG00000003403 CDK5RAP2 (ENSMGAG00000003271) #22 BRINP1 (ENSMGAG00000003244) TLR4 (ENSMGAG00000005422) ENSMGAG00000005416 TRIM32 (ENSMGAG00000003227) ASTN2 (ENSMGAG00000003165) ENSMGAG00000019621 PAPPA (ENSMGAG00000003116) TNC (ENSMGAG00000003049) TNFSF8 (ENSMGAG00000003041) TNFSF15 (ENSMGAG00000018474) TMEM268 (ENSMGAG00000003005) ATP6V1G1 (ENSMGAG00000019947) ENSMGAG00000023010 WHRN (ENSMGAG00000002738) ENSMGAG00000002743 Japanese quail MODERN SPECIES 8 TOR2A (ENSCJPG00005019941) SH2D3C (ENSCJPG00005019940) CDK9 (ENSCJPG00005019939) FPGS (ENSCJPG00005019938) ENG (ENSCJPG00005019937) AK1 (ENSCJPG00005019936) ST6GALNAC4 (ENSCJPG00005019935) ST6GALNAC6 (ENSCJPG00005019934) DPM2 (ENSCJPG00005019933) EEIG1 (ENSCJPG00005019932) NAIF1 (ENSCJPG00005019931) SLC25A25 (ENSCJPG00005019853) ENSCJPG00005019852 ENSCJPG00005019849 MEGF9 (ENSCJPG00005019848) #21 CDK5RAP2 (ENSCJPG00005019847) #22 BRINP1 (ENSCJPG00005019845) TLR4 (ENSCJPG00005019838) TRIM32 (ENSCJPG00005019835) ENSCJPG00005019834 ASTN2 (ENSCJPG00005019833) PAPPA (ENSCJPG00005019832) TNC (ENSCJPG00005019831) ENSCJPG00005019830 TNFSF15 (ENSCJPG00005019828) TMEM268 (ENSCJPG00005019827) ATP6V1G1 (ENSCJPG00005019826) WHRN (ENSCJPG00005019825) AKNA (ENSCJPG00005019823) STXBP1 (ENSCJPG00005019822) NIBAN2 (ENSCJPG00005019821) African ostrich MODERN SPECIES 325 DPM2 (ENSSCUG00000004773) EEIG1 (ENSSCUG00000004775) NAIF1 (ENSSCUG00000004779) SLC25A25 (ENSSCUG00000004785) ENSSCUG00000004794 ENSSCUG00000004797 MEGF9 (ENSSCUG00000004806) #21 CDK5RAP2 (ENSSCUG00000004810) #22 BRINP1 (ENSSCUG00000004814) Lepidosauria ANCESTRAL SPECIES 21 ENSGT00390000004550 ENSGT00950000182888.a.b ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000168385 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a.d ENSGT00940000155127 ENSGT00940000154149.a Episquamata ANCESTRAL SPECIES 15 ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00940000167622 ENSGT00940000163466 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a.d ENSGT00940000155127 ENSGT00940000159996 ENSGT00940000154149.a Toxicofera ANCESTRAL SPECIES 33 ENSGT00950000182888.a.b ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00940000163466 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084.a ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a.d ENSGT00940000153306.A.a ENSGT00940000154416.C.c.a.a ENSGT00940000164386 Elapidae ANCESTRAL SPECIES 18 ENSGT00950000182888.a.b ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00940000163466 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084.a ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000160949 ENSGT00940000156654 ENSGT00940000155188.A ENSGT01030000235246 ENSGT00990000212723 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a.d ENSGT00390000006998 ENSGT00940000153306.A.a ENSGT00940000154416.C.c.a.a Elapidae_a ANCESTRAL SPECIES 53 ENSGT00950000182888.a.b ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00940000163466 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084.a ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000155188.A ENSGT01030000235246 ENSGT00990000212723 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00390000006998 ENSGT00940000153306.A.a ENSGT00940000154416.C.c.a.a ENSGT00940000164386 ENSGT00390000016856 ENSGT00940000158016.d Acanthophiinae ANCESTRAL SPECIES 48 ENSGT00390000004550 ENSGT00950000182888.a.b ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00940000163466 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084.a ENSGT00940000160778 ENSGT00390000003140.B ENSGT00940000155188.A ENSGT01030000235246 ENSGT00990000212723 ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00390000006998 ENSGT00940000153306.A.a ENSGT00940000154416.C.c.a.a ENSGT00940000164386 ENSGT00940000158016.d ENSGT00510000050587 Mainland tiger snake MODERN SPECIES 306 ENSNSUG00000008781 MEGF9 (ENSNSUG00000008780) #21 ENSNSUG00000008760 #22 Eastern brown snake MODERN SPECIES 54 TTC16 (ENSPTXG00000006859) TOR2A (ENSPTXG00000006862) SH2D3C (ENSPTXG00000006869) CDK9 (ENSPTXG00000007754) FPGS (ENSPTXG00000007756) AK1 (ENSPTXG00000007850) ST6GALNAC6 (ENSPTXG00000007851) ST6GALNAC4 (ENSPTXG00000007852) PIP5KL1 (ENSPTXG00000007853) DPM2 (ENSPTXG00000007854) EEIG1 (ENSPTXG00000007855) NAIF1 (ENSPTXG00000007856) SLC25A25 (ENSPTXG00000007857) ENSPTXG00000007861 MEGF9 (ENSPTXG00000007863) #21 ENSPTXG00000007864 #22 BRINP1 (ENSPTXG00000007867) TLR4 (ENSPTXG00000007869) ENSPTXG00000007870 TNC (ENSPTXG00000007871) ENSPTXG00000007872 ENSPTXG00000007873 TMEM268 (ENSPTXG00000007874) ATP6V1G1 (ENSPTXG00000007875) WHRN (ENSPTXG00000007876) ALAD (ENSPTXG00000007877) ZNF618 (ENSPTXG00000007878) ENSPTXG00000007915 ENSPTXG00000007916 ENSPTXG00000007918 ENSPTXG00000007919 Blue-lipped sea krait MODERN SPECIES 3907 ENSLLTG00000016228 #22 Indian cobra MODERN SPECIES 8 ENSNNAG00000019021 TOR2A (ENSNNAG00000019024) SH2D3C (ENSNNAG00000019029) CDK9 (ENSNNAG00000019035) FPGS (ENSNNAG00000019042) AK1 (ENSNNAG00000019055) ST6GALNAC6 (ENSNNAG00000019060) ST6GALNAC4 (ENSNNAG00000019065) PIP5KL1 (ENSNNAG00000019071) DPM2 (ENSNNAG00000019077) EEIG1 (ENSNNAG00000019084) NAIF1 (ENSNNAG00000019088) SLC25A25 (ENSNNAG00000019091) ENSNNAG00000019095 MEGF9 (ENSNNAG00000019097) #21 CDK5RAP2 (ENSNNAG00000019104) #22 BRINP1 (ENSNNAG00000019106) TLR4 (ENSNNAG00000019107) ASTN2 (ENSNNAG00000019108) TRIM32 (ENSNNAG00000019109) PAPPA (ENSNNAG00000019110) TNC (ENSNNAG00000019138) ENSNNAG00000019148 TMEM268 (ENSNNAG00000019150) ATP6V1G1 (ENSNNAG00000019151) ENSNNAG00000019154 ENSNNAG00000019156 ALAD (ENSNNAG00000019160) ZNF618 (ENSNNAG00000019161) RGS3 (ENSNNAG00000019165) ENSNNAG00000019171 Lizard MODERN SPECIES 1011 ENSACAG00000045537 MEGF9 (ENSACAG00000013773) #21 ENSACAG00000037004 #22 ENSACAG00000026515 Laterata ANCESTRAL SPECIES 20 ENSGT00940000154130.a.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00530000063861.b.a ENSGT00940000158325 ENSGT00940000160114 ENSGT00940000157958 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207 ENSGT00940000167622 ENSGT00940000163466 ENSGT00940000161177 #21 ENSGT00950000183190.a.b.a.a #22 ENSGT00940000158084 ENSGT00940000160778 ENSGT00940000160949 ENSGT00390000003140.B ENSGT00940000156654 ENSGT00940000155188.A ENSGT00390000011719 ENSGT01060000248544.a.a.a.a ENSGT00390000011559 ENSGT00940000154399.b ENSGT00950000183002.B.b ENSGT00940000154254.a.d ENSGT00940000155127 ENSGT00940000159996 ENSGT00940000154149.a Common wall lizard MODERN SPECIES 419 CDK9 (ENSPMRG00000016467) FPGS (ENSPMRG00000016481) ENG (ENSPMRG00000016516) ENSPMRG00000016530 AK1 (ENSPMRG00000016539) ENSPMRG00000016557 ST6GALNAC6 (ENSPMRG00000016589) ST6GALNAC4 (ENSPMRG00000016597) PIP5KL1 (ENSPMRG00000016604) ENSPMRG00000016608 EEIG1 (ENSPMRG00000016616) NAIF1 (ENSPMRG00000016626) SLC25A25 (ENSPMRG00000016633) ENSPMRG00000016649 ENSPMRG00000016656 CDK5RAP2 (ENSPMRG00000016676) #22 ENSPMRG00000016742 BRINP1 (ENSPMRG00000016752) ENSPMRG00000016763 TLR4 (ENSPMRG00000016766) ASTN2 (ENSPMRG00000016779) ENSPMRG00000016848 TRIM32 (ENSPMRG00000016851) PAPPA (ENSPMRG00000016854) ENSPMRG00000016868 ENSPMRG00000016873 TNC (ENSPMRG00000016894) TNFSF8 (ENSPMRG00000016979) TNFSF15 (ENSPMRG00000016981) TMEM268 (ENSPMRG00000016987) ATP6V1G1 (ENSPMRG00000016991) Argentine black and white tegu MODERN SPECIES 52 ENSSMRG00000010464 ENSSMRG00000010451 ENSSMRG00000010450 ENG (ENSSMRG00000010449) AK1 (ENSSMRG00000010446) ENSSMRG00000010442 ST6GALNAC6 (ENSSMRG00000010441) ST6GALNAC4 (ENSSMRG00000010440) PIP5KL1 (ENSSMRG00000010439) DPM2 (ENSSMRG00000010438) EEIG1 (ENSSMRG00000010437) NAIF1 (ENSSMRG00000010436) SLC25A25 (ENSSMRG00000010433) ENSSMRG00000010424 MEGF9 (ENSSMRG00000010417) #21 CDK5RAP2 (ENSSMRG00000010416) #22 BRINP1 (ENSSMRG00000010395) TLR4 (ENSSMRG00000010357) TRIM32 (ENSSMRG00000010356) ASTN2 (ENSSMRG00000010353) PAPPA (ENSSMRG00000010260) TNC (ENSSMRG00000010245) TNFSF8 (ENSSMRG00000010244) TNFSF15 (ENSSMRG00000010243) TMEM268 (ENSSMRG00000010242) ATP6V1G1 (ENSSMRG00000010241) WHRN (ENSSMRG00000010225) ENSSMRG00000010220 STXBP1 (ENSSMRG00000010208) SLC31A2 (ENSSMRG00000010207) NIBAN2 (ENSSMRG00000010204) tuatara DUPLICATION tuatara MODERN SPECIES 1200 ENSSPUG00000005601 #22 ENSSPUG00000005618 #22 ENSSPUG00000005627 #22 BRINP1 (ENSSPUG00000005649) tuatara DUPLICATION tuatara MODERN SPECIES 1200 ENSSPUG00000005601 #22 ENSSPUG00000005618 #22 ENSSPUG00000005627 #22 BRINP1 (ENSSPUG00000005649) tuatara MODERN SPECIES 1200 ENSSPUG00000005601 #22 ENSSPUG00000005618 #22 ENSSPUG00000005627 #22 BRINP1 (ENSSPUG00000005649) Anura ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.a #22 Frog MODERN SPECIES 8 rab9b (ENSXETG00000018133) plp1 (ENSXETG00000018134) gla (ENSXETG00000018146) rpl36a (ENSXETG00000018150) btk (ENSXETG00000018152) TIMM8A (ENSXETG00000043545) mgc108429 (ENSXETG00000038980) taf7 (ENSXETG00000018171) drp2 (ENSXETG00000018175) rab33a (ENSXETG00000018183) mars2 (ENSXETG00000037078) aifm1 (ENSXETG00000018186) faah2 (ENSXETG00000018191) arhgap36 (ENSXETG00000033372) ENSXETG00000040029 cdk5rap2 (ENSXETG00000026157) #22 ENSXETG00000045167 tmem35a (ENSXETG00000031136) trmt2b (ENSXETG00000009650) arl13a (ENSXETG00000026166) xkrx (ENSXETG00000009649) nox1 (ENSXETG00000009648) cstf2 (ENSXETG00000009642) trmt12 (ENSXETG00000009641) prrg3 (ENSXETG00000009640) cnga2 (ENSXETG00000030049) dnaaf6 (ENSXETG00000033757) nup62 (ENSXETG00000009637) ENSXETG00000009630 gabra3 (ENSXETG00000026177) pdzd11 (ENSXETG00000009628) Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000008219 ENSLLEG00000008236 ENSLLEG00000008259 ENSLLEG00000008384 ENSLLEG00000008435 ENSLLEG00000008484 ENSLLEG00000008881 TMEM50B (ENSLLEG00000008889) DNAJC28 (ENSLLEG00000008985) ENSLLEG00000009121 ENSLLEG00000009512 ENSLLEG00000009699 ENSLLEG00000010246 ENSLLEG00000010483 DONSON (ENSLLEG00000010541) ENSLLEG00000010902 #22 ENSLLEG00000010932 ENSLLEG00000011018 ENSLLEG00000011038 ITSN1 (ENSLLEG00000011265) ATP5PO (ENSLLEG00000013638) ENSLLEG00000013687 ENSLLEG00000013704 ENSLLEG00000013723 ENSLLEG00000013758 C21orf62 (ENSLLEG00000013774) PAXBP1 (ENSLLEG00000013832) SYNJ1 (ENSLLEG00000014414) CFAP298 (ENSLLEG00000014680) ENSLLEG00000014733 ENSLLEG00000014870 Coelacanth MODERN SPECIES 2125 zgc:92275 (ENSLACG00000008124) ENSLACG00000006606 #22 PDCL (ENSLACG00000004831) ENSLACG00000001929 ENSLACG00000001759 Vertebrata ANCESTRAL SPECIES 991 ENSGT00950000183190.a.a ##22 ENSGT00950000183190.a.b.a.b ##22 Cyclostomata ANCESTRAL SPECIES 1115 ENSGT00950000183190.a.a ##22 ENSGT00950000183190.a.b.a.b ##22 Hagfish MODERN SPECIES 1019 ENSEBUG00000008189 ENSEBUG00000008867 ptena (ENSEBUG00000015793) ENSEBUG00000014252 b3galt2 (ENSEBUG00000007729) RABGAP1 (ENSEBUG00000009561) kifap3b (ENSEBUG00000006977) ENSEBUG00000011379 PRRX2 (ENSEBUG00000008573) ENSEBUG00000014556 ##22 ENSEBUG00000006123 ##22 NELFE (ENSEBUG00000017070) ENSEBUG00000012190 ENSEBUG00000000775 ENSEBUG00000009350 rpl28 (ENSEBUG00000009129) ENSEBUG00000008200 ENSEBUG00000006472 ENSEBUG00000013992 ENSEBUG00000010578 ENSEBUG00000016941 uck2b (ENSEBUG00000016796) angptl1a (ENSEBUG00000011811) ENSEBUG00000014058 mrps14 (ENSEBUG00000012209) sec22bb (ENSEBUG00000001213) Gnathostomata ANCESTRAL SPECIES 12 ENSGT00940000158069 ENSGT00950000183179.a ENSGT00940000158333 ENSGT00530000063843.b ENSGT00940000173158 ENSGT00940000154654 ENSGT01030000234606.b ENSGT00390000010743.a ENSGT00940000156236 ENSGT00390000012568 ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.b.a.b ##22 ENSGT00940000159284 ENSGT00930000151043 ENSGT00390000004791 ENSGT00390000002738.b ENSGT00940000160168 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Clupeocephala ANCESTRAL SPECIES 1089 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.b.a.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 NAME_4 ANCESTRAL SPECIES 9 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.b.a.b ##22 ENSGT00390000001810.b ENSGT00390000004708 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000177308.d ENSGT00940000177308.c Mummichog MODERN SPECIES 2335 rnf126 (ENSFHEG00000002544) SUGP1 (ENSFHEG00000002556) stk11 (ENSFHEG00000002568) ENSFHEG00000002569 ENSFHEG00000002573 cirbpa (ENSFHEG00000002580) NDUFA13 (ENSFHEG00000002587) GATAD2A (ENSFHEG00000002594) ARMC6 (ENSFHEG00000002612) SLC25A42 (ENSFHEG00000002629) ENSFHEG00000002640 ENSFHEG00000002659 tm6sf2a (ENSFHEG00000002667) ENSFHEG00000002675 ENSFHEG00000002740 ##22 ENSFHEG00000002757 ##22 lyrm5a (ENSFHEG00000002767) dnai7 (ENSFHEG00000002790) PRKAB2 (ENSFHEG00000002805) ENSFHEG00000002845 eeig2a (ENSFHEG00000002856) prpf38b (ENSFHEG00000002861) ENSFHEG00000002875 ENSFHEG00000002879 ENSFHEG00000000082 ENSFHEG00000002889 ENSFHEG00000002898 WDR47 (ENSFHEG00000002929) ENSFHEG00000002941 ENSFHEG00000002948 ENSFHEG00000002973 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Huchen MODERN SPECIES 231 ENSHHUG00000027105 MAU2 (ENSHHUG00000027118) SLC25A42 (ENSHHUG00000027205) ENSHHUG00000027216 ENSHHUG00000027246 ##22 ENSHHUG00000027236 ##22 ENSHHUG00000027249 ##22 PRKAB2 (ENSHHUG00000027255) ENSHHUG00000027264 eeig2a (ENSHHUG00000027298) ENSHHUG00000027304 ENSHHUG00000027315 ENSHHUG00000027324 ENSHHUG00000027340 WDR47 (ENSHHUG00000027345) CAMSAP2 (ENSHHUG00000027351) ENSHHUG00000027376 CAPN10 (ENSHHUG00000027384) eif4e2 (ENSHHUG00000027391) ENSHHUG00000027404 ENSHHUG00000027416 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Mammalia ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Theria ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Eutheria ANCESTRAL SPECIES 53 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.b ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 Atlantogenata ANCESTRAL SPECIES 205 ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 Afrotheria ANCESTRAL SPECIES 267 ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 Afrotheria_a ANCESTRAL SPECIES 271 ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 Elephant DUPLICATION Elephant MODERN SPECIES 26 SF3B4 (ENSLAFG00000008531) SV2A (ENSLAFG00000008529) BOLA1 (ENSLAFG00000008527) H2AC21 (ENSLAFG00000001481) ENSLAFG00000031642 H2BC21 (ENSLAFG00000007572) ENSLAFG00000029983 ENSLAFG00000027548 ENSLAFG00000021961 ENSLAFG00000029422 ENSLAFG00000025802 ENSLAFG00000026296 ##22 ENSLAFG00000029272 H2BC18 (ENSLAFG00000031442) ENSLAFG00000018352 ENSLAFG00000029191 ##22 ENSLAFG00000031707 PALMD (ENSLAFG00000005199) FRRS1 (ENSLAFG00000010929) AGL (ENSLAFG00000000619) SLC35A3 (ENSLAFG00000007403) MFSD14A (ENSLAFG00000032648) SASS6 (ENSLAFG00000002382) TRMT13 (ENSLAFG00000002383) LRRC39 (ENSLAFG00000002386) DBT (ENSLAFG00000006373) RTCA (ENSLAFG00000001473) CDC14A (ENSLAFG00000001476) VCAM1 (ENSLAFG00000003191) EXTL2 (ENSLAFG00000002468) SLC30A7 (ENSLAFG00000002470) Elephant MODERN SPECIES 26 RTCA (ENSLAFG00000001473) DBT (ENSLAFG00000006373) LRRC39 (ENSLAFG00000002386) TRMT13 (ENSLAFG00000002383) SASS6 (ENSLAFG00000002382) MFSD14A (ENSLAFG00000032648) SLC35A3 (ENSLAFG00000007403) AGL (ENSLAFG00000000619) FRRS1 (ENSLAFG00000010929) PALMD (ENSLAFG00000005199) ENSLAFG00000031707 ENSLAFG00000029191 ##22 ENSLAFG00000018352 H2BC18 (ENSLAFG00000031442) ENSLAFG00000029272 ENSLAFG00000026296 ##22 ENSLAFG00000025802 ENSLAFG00000029422 ENSLAFG00000021961 ENSLAFG00000027548 ENSLAFG00000029983 H2BC21 (ENSLAFG00000007572) ENSLAFG00000031642 H2AC21 (ENSLAFG00000001481) BOLA1 (ENSLAFG00000008527) SV2A (ENSLAFG00000008529) SF3B4 (ENSLAFG00000008531) MTMR11 (ENSLAFG00000008533) OTUD7B (ENSLAFG00000026624) VPS45 (ENSLAFG00000018411) PLEKHO1 (ENSLAFG00000018415) Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153125.D.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01020000230360.c.b.a.b.a.b ENSGT01100000263514.A.e.a.a ENSGT00940000155501.a.b ENSGT00990000203553.c.b ENSGT01060000248528.b.kh.xb.b.a ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT00940000153118.db.a.b ENSGT01060000248528.b.kh.yb.a.a ENSGT01100000263506.a.f.b ENSGT01060000248528.b.kh.yb.a.b ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B ENSGT00940000156302 ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Glires ANCESTRAL SPECIES ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B ENSGT00940000156302 ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Rodentia ANCESTRAL SPECIES 67 ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f Rodentia_A ANCESTRAL SPECIES 95 ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f Sciuridae ANCESTRAL SPECIES 107 ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f Marmotini ANCESTRAL SPECIES 33 ENSGT00940000156893 ENSGT00950000182907.a.a.i.b ENSGT00530000063760.b ENSGT00550000075028.z ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.u ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f Marmotini_b ANCESTRAL SPECIES 304 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f Arctic ground squirrel MODERN SPECIES 946 ENSUPAG00010001610 ENSUPAG00010001606 H2BC18 (ENSUPAG00010001593) FCGR1A (ENSUPAG00010001577) ENSUPAG00010001553 ENSUPAG00010001521 ##22 ENSUPAG00010001484 Lagomorpha ANCESTRAL SPECIES 1 ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B ENSGT00940000156302 ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 ENSGT00390000007258 Rabbit MODERN SPECIES 4 OTUD7B (ENSOCUG00000013924) MTMR11 (ENSOCUG00000004616) SF3B4 (ENSOCUG00000004614) SV2A (ENSOCUG00000003894) BOLA1 (ENSOCUG00000004609) ENSOCUG00000037254 H2BC21 (ENSOCUG00000023535) ENSOCUG00000023564 ENSOCUG00000025918 ENSOCUG00000027315 ENSOCUG00000031190 ENSOCUG00000023811 H2BC18 (ENSOCUG00000024543) ENSOCUG00000003403 ENSOCUG00000038567 ENSOCUG00000022427 ##22 ENSOCUG00000021718 ENSOCUG00000023196 HJV (ENSOCUG00000006209) ENSOCUG00000007257 TXNIP (ENSOCUG00000003010) POLR3GL (ENSOCUG00000006212) ANKRD34A (ENSOCUG00000029638) LIX1L (ENSOCUG00000003018) RBM8A (ENSOCUG00000025693) PEX11B (ENSOCUG00000003029) ITGA10 (ENSOCUG00000003032) ENSOCUG00000028209 ANKRD35 (ENSOCUG00000002128) PIAS3 (ENSOCUG00000026198) POLR3C (ENSOCUG00000003050) Primates ANCESTRAL SPECIES 7 ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263474.a.b.b.e.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT01060000248528.b.jh.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B ENSGT01100000263506.a.e.a.b ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Haplorrhini ANCESTRAL SPECIES 7 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.b ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Simiiformes ANCESTRAL SPECIES ENSGT00950000183190.a.b.a.b ##22 Catarrhini ANCESTRAL SPECIES 10 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01020000230360.c.b.a.b.a.b ENSGT01060000248528.b.kh.yb.b.b.b.b ENSGT01100000263514.A.e.a.a ENSGT01060000248528.b.jh.b ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 ENSGT00390000007258 Cercopithecidae ANCESTRAL SPECIES 22 ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.m ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.b ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 ENSGT00390000007258 Cercopithecinae ANCESTRAL SPECIES 129 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.m ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.b ENSGT01060000248528.b.kh.yb.b.a.lb.a ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00420000029746.f.c.b.b ENSGT00400000022759 ENSGT00910000147134 ENSGT01050000244864.D ENSGT01030000234531.A.b.b.b.b.b.e.b.a ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 ENSGT00420000029746.e.a.b.b.b.a Macaca ANCESTRAL SPECIES ENSGT01100000263548.a.b.b ENSGT01060000248528.b.kh.yb.a.b ENSGT01100000263506.a.f.b ENSGT01060000248528.b.jh.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT01060000248528.b.kh.yb.b.a.mb ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f.c.b.b ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00400000022759 ENSGT00910000147134 ENSGT01050000244864.D ENSGT01030000234531.A.b.b.b.b.b.e.b.a ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 ENSGT00420000029746.e.a.b.b.b.a Macaca_a ANCESTRAL SPECIES ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.m ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f.c.b.b ENSGT00400000022759 ENSGT00960000186796.b.b.a ENSGT00910000147134 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 ENSGT00420000029746.e.a.b.b.b.a ENSGT00940000162994.e.a.d.b ENSGT00950000183112.b.b ENSGT00940000158522 Crab-eating macaque MODERN SPECIES VPS45 (ENSMFAG00000032727) OTUD7B (ENSMFAG00000001415) MTMR11 (ENSMFAG00000031699) SF3B4 (ENSMFAG00000042395) SV2A (ENSMFAG00000034474) BOLA1 (ENSMFAG00000048940) H2AC21 (ENSMFAG00000054389) H2AC20 (ENSMFAG00000005216) H2BC21 (ENSMFAG00000060844) ENSMFAG00000059848 ENSMFAG00000060624 H2AC18 (ENSMFAG00000065787) H2BC18 (ENSMFAG00000003396) FCGR1A (ENSMFAG00000001064) ENSMFAG00000036545 ENSMFAG00000047736 ##22 ENSMFAG00000055151 ENSMFAG00000033357 NDUFA11 (ENSMFAG00000017334) ENSMFAG00000050117 ENSMFAG00000050775 ENSMFAG00000060817 ENSMFAG00000037379 ENSMFAG00000065130 GJA8 (ENSMFAG00000040959) GJA5 (ENSMFAG00000018627) ACP6 (ENSMFAG00000046287) BCL9 (ENSMFAG00000043762) ENSMFAG00000050845 CHD1L (ENSMFAG00000043562) FMO5 (ENSMFAG00000002744) Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.m ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.b ENSGT00940000156302 ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00420000029746.f.c.b.b ENSGT00400000022759 ENSGT00940000154913.g.b ENSGT00910000147134 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 ENSGT00420000029746.e.a.b.a.a.a.a.a.a.a Olive baboon MODERN SPECIES VPS45 (ENSPANG00000012294) OTUD7B (ENSPANG00000009169) MTMR11 (ENSPANG00000020583) SF3B4 (ENSPANG00000005126) SV2A (ENSPANG00000008740) BOLA1 (ENSPANG00000005165) H2AC21 (ENSPANG00000048915) H2BC21 (ENSPANG00000043204) ENSPANG00000033703 H2AC20 (ENSPANG00000040460) ENSPANG00000049378 H3C13 (ENSPANG00000045449) H2BC18 (ENSPANG00000040080) FCGR1A (ENSPANG00000001763) ENSPANG00000002791 ENSPANG00000036881 ##22 ENSPANG00000037189 ENSPANG00000012430 ENSPANG00000037273 ENSPANG00000049208 GJA8 (ENSPANG00000014667) ENSPANG00000040876 GJA5 (ENSPANG00000014222) ACP6 (ENSPANG00000004993) BCL9 (ENSPANG00000021034) CHD1L (ENSPANG00000009170) ENSPANG00000005600 ##22 ENSPANG00000050046 ##22 SEC22B (ENSPANG00000033849) NOTCH2 (ENSPANG00000024009) ADAM30 (ENSPANG00000021035) Rhinopithecus ANCESTRAL SPECIES 710 ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 Black snub-nosed monkey MODERN SPECIES 846 H3-7 (ENSRBIG00000015383) H2BC18 (ENSRBIG00000035220) FCGR1A (ENSRBIG00000038615) ENSRBIG00000035418 ENSRBIG00000040328 ##22 ENSRBIG00000036231 ENSRBIG00000040725 Hominoidea ANCESTRAL SPECIES 7 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.m ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00390000009543.d ENSGT00420000029746.f.c Hominidae ANCESTRAL SPECIES 6 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.m ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f.e ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00390000009543.d ENSGT00420000029746.f.c Orangutan MODERN SPECIES MTMR11 (ENSPPYG00000000911) SF3B4 (ENSPPYG00000000912) SV2A (ENSPPYG00000000913) BOLA1 (ENSPPYG00000040309) H2AC21 (ENSPPYG00000035072) ENSPPYG00000030729 H2BC21 (ENSPPYG00000000917) ENSPPYG00000000922 ENSPPYG00000039474 ENSPPYG00000036744 ENSPPYG00000036244 ENSPPYG00000032863 ENSPPYG00000031542 FCGR1A (ENSPPYG00000019984) ENSPPYG00000039543 ENSPPYG00000038344 ##22 ENSPPYG00000032672 ENSPPYG00000040768 ENSPPYG00000039570 ENSPPYG00000000924 ENSPPYG00000033178 ENSPPYG00000034414 ##22 ENSPPYG00000000953 ENSPPYG00000041334 ENSPPYG00000000952 ##22 PDE4DIP (ENSPPYG00000030940) ##22 ENSPPYG00000040487 GJA8 (ENSPPYG00000000951) GJA5 (ENSPPYG00000000949) ACP6 (ENSPPYG00000000948) BCL9 (ENSPPYG00000000947) Strepsirrhini ANCESTRAL SPECIES ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153125.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 ENSGT00390000007258 Lemuriformes ANCESTRAL SPECIES 58 ENSGT00940000163314 ENSGT00940000163016 ENSGT00940000162298 ENSGT00940000163102 ENSGT00940000159644 ENSGT00940000163521 ENSGT00940000161576 ENSGT00940000163165 ENSGT00940000163388 ENSGT00940000163486 ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000162950 ENSGT01100000263474.a.b.b.e.a.a.b ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT00940000153125.E.d ENSGT00940000162941 ENSGT00940000153104.e.b.a.b ENSGT00940000160281 ENSGT00940000153125.C ENSGT00940000153125.B ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT01060000248528.b.jh.a.b ENSGT01100000263506.a.e.a.a.a.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.a ENSGT00940000160426 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT01060000248528.b.kh.yb.b Lemuriformes_a ANCESTRAL SPECIES 116 ENSGT00940000163105 ENSGT00940000163682 ENSGT00940000163314 ENSGT00940000163016 ENSGT00940000162298 ENSGT00940000163102 ENSGT00940000159644 ENSGT00940000163521 ENSGT00940000161576 ENSGT00940000163165 ENSGT00940000163486 ENSGT00940000162950 ENSGT01100000263474.a.b.b.e.a.a.b ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00940000162941 ENSGT00940000153104.e.b.a.b ENSGT00940000160281 ENSGT00940000153125.A ENSGT00940000153125.B ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT00940000162956 ENSGT00390000002062 ENSGT00950000182802.B.a.a.b ENSGT00940000161530 ENSGT00940000158017 ENSGT00940000162723.b Greater bamboo lemur MODERN SPECIES 1644 ENSPSMG00000003529 ENSPSMG00000003539 ENSPSMG00000003546 ENSPSMG00000003549 H2BC18 (ENSPSMG00000003555) FCGR1A (ENSPSMG00000003570) ENSPSMG00000003576 ##22 ENSPSMG00000003579 Bushbaby MODERN SPECIES 289 ANP32E (ENSOGAG00000004841) PLEKHO1 (ENSOGAG00000006275) VPS45 (ENSOGAG00000006271) OTUD7B (ENSOGAG00000030526) MTMR11 (ENSOGAG00000006266) SF3B4 (ENSOGAG00000006265) SV2A (ENSOGAG00000006260) BOLA1 (ENSOGAG00000032964) H2AC21 (ENSOGAG00000006258) H2AC20 (ENSOGAG00000006256) ENSOGAG00000006255 ENSOGAG00000027485 H3-7 (ENSOGAG00000006253) H2BC18 (ENSOGAG00000032731) FCGR1A (ENSOGAG00000014101) ENSOGAG00000024879 ##22 ENSOGAG00000028082 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153125.C ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT00990000203553.c.a.a.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.b ENSGT01100000263575.A ENSGT01100000263575.B.t.a.a.a ENSGT00940000156302 ENSGT01100000263559.B ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00990000203553.c.a.a.a.b ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263559.B ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Artiodactyla ANCESTRAL SPECIES ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.b.b.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00990000203553.c.a.a.a.b ENSGT01100000263506.a.e.a.a.b.b ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT00940000153118.db.b ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Suina ANCESTRAL SPECIES 32 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000264175 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Pig MODERN SPECIES 12 SF3B4 (ENSSSCG00000006665) SV2A (ENSSSCG00000006666) BOLA1 (ENSSSCG00000006667) H2AC21 (ENSSSCG00000063420) H2AC20 (ENSSSCG00000034598) ENSSSCG00000047083 ENSSSCG00000053902 ENSSSCG00000057447 H2BC21 (ENSSSCG00000060759) ENSSSCG00000055629 ENSSSCG00000057512 H3C14 (ENSSSCG00000063270) ENSSSCG00000059426 H2BC18 (ENSSSCG00000062160) FCGR1A (ENSSSCG00000006678) ENSSSCG00000006679 ##22 HJV (ENSSSCG00000035429) TXNIP (ENSSSCG00000031262) ENSSSCG00000006682 ANKRD34A (ENSSSCG00000037823) LIX1L (ENSSSCG00000026502) RBM8A (ENSSSCG00000028509) ENSSSCG00000006685 PEX11B (ENSSSCG00000056541) ITGA10 (ENSSSCG00000006687) ANKRD35 (ENSSSCG00000006688) PIAS3 (ENSSSCG00000006689) NUDT17 (ENSSSCG00000006690) POLR3C (ENSSSCG00000006691) RNF115 (ENSSSCG00000037355) PDZK1 (ENSSSCG00000006693) Chacoan peccary MODERN SPECIES 29 ENSCWAG00000009861 OTUD7B (ENSCWAG00000009903) MTMR11 (ENSCWAG00000009987) SF3B4 (ENSCWAG00000010291) SV2A (ENSCWAG00000010325) BOLA1 (ENSCWAG00000010457) H2AC21 (ENSCWAG00000010470) H2AC20 (ENSCWAG00000010494) H2BC21 (ENSCWAG00000010520) H3C15 (ENSCWAG00000010535) ENSCWAG00000010555 ENSCWAG00000010575 ENSCWAG00000010582 H2BC18 (ENSCWAG00000010598) ENSCWAG00000010635 ENSCWAG00000010702 ##22 ENSCWAG00000010758 HJV (ENSCWAG00000010824) TXNIP (ENSCWAG00000010902) ENSCWAG00000010984 ANKRD34A (ENSCWAG00000011022) LIX1L (ENSCWAG00000011045) RBM8A (ENSCWAG00000011078) ENSCWAG00000011122 PEX11B (ENSCWAG00000011193) ITGA10 (ENSCWAG00000011314) ANKRD35 (ENSCWAG00000011823) PIAS3 (ENSCWAG00000012113) NUDT17 (ENSCWAG00000012279) POLR3C (ENSCWAG00000012364) RNF115 (ENSCWAG00000012426) Artiodactyla_a ANCESTRAL SPECIES ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263506.a.e.a.a.a.a.a ENSGT01100000263575.B.t.a.a.a ENSGT00940000156302 ENSGT01100000263559.B ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Camelidae ANCESTRAL SPECIES 6 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.a.a.a.a.b ENSGT01100000263559.B ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00910000145379 ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 ENSGT00950000182849.A.f.b Arabian camel MODERN SPECIES 13 VPS45 (ENSCDRG00005016029) OTUD7B (ENSCDRG00005015982) MTMR11 (ENSCDRG00005015753) SF3B4 (ENSCDRG00005015698) SV2A (ENSCDRG00005015609) BOLA1 (ENSCDRG00005015588) H2AC21 (ENSCDRG00005015577) H2AC20 (ENSCDRG00005015569) ENSCDRG00005015337 ENSCDRG00005015322 ENSCDRG00005015313 ENSCDRG00005015303 ENSCDRG00005015297 H2BC18 (ENSCDRG00005015267) FCGR1A (ENSCDRG00005015157) ENSCDRG00005015110 ##22 ENSCDRG00005015029 HJV (ENSCDRG00005014941) TXNIP (ENSCDRG00005014863) POLR3GL (ENSCDRG00005014814) ANKRD34A (ENSCDRG00005014782) LIX1L (ENSCDRG00005014710) RBM8A (ENSCDRG00005014616) ENSCDRG00005014575 ITGA10 (ENSCDRG00005014118) ANKRD35 (ENSCDRG00005013927) PIAS3 (ENSCDRG00005013833) ENSCDRG00005013752 POLR3C (ENSCDRG00005013609) ENSCDRG00005013563 RNF115 (ENSCDRG00005013518) Artiodactyla_b ANCESTRAL SPECIES ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f ENSGT01060000248528.a.b.a.a.a.b ENSGT00940000164494 ENSGT01100000263569.a.b.b ENSGT01100000263559.B ENSGT00940000156302 ENSGT01100000263575.B.t.a.a.a ENSGT01060000248528.b.jh.b ENSGT01100000263514.A.e.a.a ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Pecora ANCESTRAL SPECIES 2 ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f ENSGT00940000156302 ENSGT01100000263474.a.b.a.d ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Yarkand deer MODERN SPECIES 12 ANP32E (ENSCHYG00000012932) ENSCHYG00000013481 VPS45 (ENSCHYG00000013592) OTUD7B (ENSCHYG00000014204) ENSCHYG00000014343 MTMR11 (ENSCHYG00000014428) ENSCHYG00000014732 SV2A (ENSCHYG00000014801) BOLA1 (ENSCHYG00000014998) H2AC21 (ENSCHYG00000015023) H2AC20 (ENSCHYG00000015051) H2BC21 (ENSCHYG00000015088) ENSCHYG00000015117 H3-7 (ENSCHYG00000015151) H2BC18 (ENSCHYG00000015177) ENSCHYG00000015246 ##22 FCGR1A (ENSCHYG00000015523) ENSCHYG00000015606 HJV (ENSCHYG00000015634) TXNIP (ENSCHYG00000015719) POLR3GL (ENSCHYG00000015898) ANKRD34A (ENSCHYG00000015933) LIX1L (ENSCHYG00000015993) RBM8A (ENSCHYG00000016090) PEX11B (ENSCHYG00000004579) ITGA10 (ENSCHYG00000004850) ANKRD35 (ENSCHYG00000004968) PIAS3 (ENSCHYG00000005027) NUDT17 (ENSCHYG00000005077) POLR3C (ENSCHYG00000005139) RNF115 (ENSCHYG00000005206) Percora_a ANCESTRAL SPECIES 1 ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f ENSGT00940000156302 ENSGT01100000263474.a.b.a.d ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Siberian musk deer MODERN SPECIES 247 VPS45 (ENSMMSG00000020801) OTUD7B (ENSMMSG00000020949) MTMR11 (ENSMMSG00000020972) SF3B4 (ENSMMSG00000021043) SV2A (ENSMMSG00000021080) BOLA1 (ENSMMSG00000021162) H2AC21 (ENSMMSG00000021172) H2AC20 (ENSMMSG00000021185) H2BC21 (ENSMMSG00000021195) ENSMMSG00000021208 ENSMMSG00000013230 ENSMMSG00000013235 ENSMMSG00000013242 H3-7 (ENSMMSG00000013251) H2BC18 (ENSMMSG00000013260) ENSMMSG00000013270 ##22 ENSMMSG00000013282 ENSMMSG00000013290 ENSMMSG00000013298 ENSMMSG00000013310 Bovidae ANCESTRAL SPECIES 1 ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f ENSGT00940000156302 ENSGT01100000263474.a.b.a.d ENSGT01060000248528.a.b.a.a.a.b ENSGT00940000164494 ENSGT01100000263569.a.b.b ENSGT01100000263559.B ENSGT01060000248528.b.jh.b ENSGT01100000263514.A.e.a.a ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Bovinae ANCESTRAL SPECIES 1 ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.i ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f ENSGT00940000156302 ENSGT01100000263506.a.e.a.a.a.a.b.a ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Bos ANCESTRAL SPECIES ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.i ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT01100000263575.B.u ENSGT01100000263559.A.f ENSGT00940000156302 ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Bos_a ANCESTRAL SPECIES 81 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Wild yak MODERN SPECIES 2590 ENSBMUG00000001405 H2BC21 (ENSBMUG00000001422) ENSBMUG00000001445 ENSBMUG00000001463 ENSBMUG00000001473 ENSBMUG00000001483 H2BC18 (ENSBMUG00000001500) FCGR1A (ENSBMUG00000001517) ENSBMUG00000001550 ##22 ENSBMUG00000001566 Bos_b ANCESTRAL SPECIES 1 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.i ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000156302 ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01100000263480.a.a.a.b.a.b.b.a.b ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Hybrid Bos Indicus MODERN SPECIES 22 CA14 (ENSBIXG00005004451) ENSBIXG00005006696 PLEKHO1 (ENSBIXG00005025976) VPS45 (ENSBIXG00005025887) OTUD7B (ENSBIXG00005025620) MTMR11 (ENSBIXG00005004349) ENSBIXG00005004342 SV2A (ENSBIXG00005025476) ENSBIXG00005025435 H2AC20 (ENSBIXG00005025423) ENSBIXG00005004318 H3-7 (ENSBIXG00005025404) ENSBIXG00005004313 H2BC18 (ENSBIXG00005025377) FCGR1A (ENSBIXG00005025364) ENSBIXG00005025348 ##22 ENSBIXG00005025317 ENSBIXG00005025301 HJV (ENSBIXG00005006687) TXNIP (ENSBIXG00005025179) POLR3GL (ENSBIXG00005025127) ANKRD34A (ENSBIXG00005025105) ENSBIXG00005025081 ENSBIXG00005025011 ITGA10 (ENSBIXG00005004255) ANKRD35 (ENSBIXG00005024727) ENSBIXG00005004206 PIAS3 (ENSBIXG00005024590) NUDT17 (ENSBIXG00005024499) POLR3C (ENSBIXG00005024477) PDZK1 (ENSBIXG00005024420) Cow MODERN SPECIES 22 VPS45 (ENSBTAG00000020635) OTUD7B (ENSBTAG00000001586) MTMR11 (ENSBTAG00000012496) SF3B4 (ENSBTAG00000012495) SV2A (ENSBTAG00000001599) BOLA1 (ENSBTAG00000006050) H2AC20 (ENSBTAG00000040098) H2AC21 (ENSBTAG00000032456) ENSBTAG00000050122 H2AC19 (ENSBTAG00000046003) H4C14 (ENSBTAG00000032453) H2AC18 (ENSBTAG00000038476) H3C13 (ENSBTAG00000050881) H2BC18 (ENSBTAG00000032455) FCGR1A (ENSBTAG00000008592) ENSBTAG00000037565 ##22 MGC134040 (ENSBTAG00000022741) HJV (ENSBTAG00000021823) TXNIP (ENSBTAG00000020060) POLR3GL (ENSBTAG00000013910) ANKRD34A (ENSBTAG00000008365) RBM8A (ENSBTAG00000008369) GNRHR2 (ENSBTAG00000008370) PEX11B (ENSBTAG00000008372) ITGA10 (ENSBTAG00000008373) ANKRD35 (ENSBTAG00000038844) ENSBTAG00000052421 PIAS3 (ENSBTAG00000021634) NUDT17 (ENSBTAG00000021635) POLR3C (ENSBTAG00000021637) RNF115 (ENSBTAG00000008131) American bison MODERN SPECIES 3032 ENSBBBG00000023289 ENSBBBG00000023283 H2AC21 (ENSBBBG00000023276) H2AC20 (ENSBBBG00000023272) H2BC21 (ENSBBBG00000008849) ENSBBBG00000008681 ENSBBBG00000023258 ENSBBBG00000023255 ENSBBBG00000006078 ENSBBBG00000023206 ENSBBBG00000023201 H4C15 (ENSBBBG00000023197) H3C13 (ENSBBBG00000023194) H2BC18 (ENSBBBG00000023192) FCGR1A (ENSBBBG00000023183) ENSBBBG00000000326 ##22 ENSBBBG00000000337 Caprinae ANCESTRAL SPECIES 2 ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.i ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 ENSGT00950000182849.A.f.b Rambouillet Sheep MODERN SPECIES SV2A (ENSOARG00020007009) BOLA1 (ENSOARG00020006951) HIST2H2AB (ENSOARG00020006921) HIST2H2AC (ENSOARG00020006891) HIST2H2BE (ENSOARG00020006877) ENSOARG00020006850 ENSOARG00020006832 ENSOARG00020006810 ENSOARG00020006796 ENSOARG00020006772 ENSOARG00020006745 ENSOARG00020006725 H3-7 (ENSOARG00020006703) H2BC18 (ENSOARG00020006656) FCGR1A (ENSOARG00020006588) ENSOARG00020006514 ##22 ENSOARG00020006487 ENSOARG00020006466 HJV (ENSOARG00020004031) TXNIP (ENSOARG00020003962) POLR3GL (ENSOARG00020003936) ANKRD34A (ENSOARG00020003925) LIX1L (ENSOARG00020003889) RBM8A (ENSOARG00020003860) PEX11B (ENSOARG00020003815) ITGA10 (ENSOARG00020003429) PIAS3 (ENSOARG00020003167) NUDT17 (ENSOARG00020003144) POLR3C (ENSOARG00020003118) RNF115 (ENSOARG00020003086) PDZK1 (ENSOARG00020003047) Goat MODERN SPECIES 22 SV2A (ENSCHIG00000017231) BOLA1 (ENSCHIG00000023087) H2AC21 (ENSCHIG00000006209) H2AC20 (ENSCHIG00000010392) H2BC21 (ENSCHIG00000012955) ENSCHIG00000010054 ENSCHIG00000022263 ENSCHIG00000007823 ENSCHIG00000013722 ENSCHIG00000008044 ENSCHIG00000013241 ENSCHIG00000009699 ENSCHIG00000010234 H2BC18 (ENSCHIG00000007673) FCGR1A (ENSCHIG00000027141) ENSCHIG00000017683 ##22 ENSCHIG00000023415 HJV (ENSCHIG00000010408) TXNIP (ENSCHIG00000017689) POLR3GL (ENSCHIG00000008824) ANKRD34A (ENSCHIG00000007942) LIX1L (ENSCHIG00000012584) RBM8A (ENSCHIG00000012114) ITGA10 (ENSCHIG00000027027) ANKRD35 (ENSCHIG00000018547) PIAS3 (ENSCHIG00000010071) NUDT17 (ENSCHIG00000014413) POLR3C (ENSCHIG00000022431) RNF115 (ENSCHIG00000025502) PDZK1 (ENSCHIG00000011722) ENSCHIG00000017806 Cetacea ANCESTRAL SPECIES ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B ENSGT00940000156302.m.b ENSGT01100000263575.B.t.a.a.a.a.b ENSGT01100000263575.B.t.a.a.a.a.a ENSGT00940000156302.m.a ENSGT01100000263506.a.e.a.a.a.a.a ENSGT01060000248528.b.jh.b ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Blue whale MODERN SPECIES SF3B4 (ENSBMSG00010003943) SV2A (ENSBMSG00010003927) BOLA1 (ENSBMSG00010003920) H2AC21 (ENSBMSG00010003913) H2AC20 (ENSBMSG00010003906) H2BC21 (ENSBMSG00010003899) ENSBMSG00010003894 ENSBMSG00010003888 ENSBMSG00010003885 ENSBMSG00010003880 ENSBMSG00010003874 ENSBMSG00010003866 ENSBMSG00010003857 ENSBMSG00010003847 H2BC18 (ENSBMSG00010003841) ENSBMSG00010003827 ##22 HJV (ENSBMSG00010003805) TXNIP (ENSBMSG00010003790) POLR3GL (ENSBMSG00010003781) ANKRD34A (ENSBMSG00010003767) LIX1L (ENSBMSG00010003757) RBM8A (ENSBMSG00010003752) PEX11B (ENSBMSG00010003741) ITGA10 (ENSBMSG00010003688) NUDT17 (ENSBMSG00010003650) ENSBMSG00010003614 POLR3C (ENSBMSG00010003595) ENSBMSG00010003585 ENSBMSG00010003575 PDZK1 (ENSBMSG00010003562) ENSBMSG00010003553 Odontoceti ANCESTRAL SPECIES ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B ENSGT00940000156302.m.a ENSGT01100000263575.B.t.a.a.a.a.a ENSGT01100000263575.B.t.a.a.a.a.b ENSGT00940000156302.m.b ENSGT01100000263559.A.f ENSGT01100000263575.B.t.a.a.b ENSGT01100000263506.a.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Sperm whale MODERN SPECIES 15 GJA8 (ENSPCTG00005013358) GPR89A (ENSPCTG00005013307) PDZK1 (ENSPCTG00005013079) ENSPCTG00005012998 ENSPCTG00005012939 POLR3C (ENSPCTG00005012859) ITGA10 (ENSPCTG00005012521) PEX11B (ENSPCTG00005012430) RBM8A (ENSPCTG00005012300) LIX1L (ENSPCTG00005012257) ENSPCTG00005012232 ENSPCTG00005012215 POLR3GL (ENSPCTG00005012074) TXNIP (ENSPCTG00005011915) HJV (ENSPCTG00005011809) ENSPCTG00005011661 ##22 ENSPCTG00005011561 ENSPCTG00005011537 ENSPCTG00005011520 ENSPCTG00005011505 ENSPCTG00005011490 ENSPCTG00005011469 ENSPCTG00005011455 ENSPCTG00005011442 H2AC20 (ENSPCTG00005011425) H2AC21 (ENSPCTG00005011410) BOLA1 (ENSPCTG00005011392) SV2A (ENSPCTG00005011188) SF3B4 (ENSPCTG00005011142) MTMR11 (ENSPCTG00005010793) OTUD7B (ENSPCTG00005010704) Odontoceti_a ANCESTRAL SPECIES ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B ENSGT00940000156302.m.a.b ENSGT01100000263575.B.t.a.a.a.a.a ENSGT01100000263575.B.t.a.a.a.a.b ENSGT00940000156302.m.b ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f ENSGT00940000156302.m.b ENSGT01100000263575.B.t.a.a.a.a.b ENSGT01100000263575.B.t.a.a.a.a.a ENSGT00940000156302.m.a.b ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 ENSGT01010000228887 Vaquita MODERN SPECIES MTMR11 (ENSPSNG00000001321) SF3B4 (ENSPSNG00000001286) SV2A (ENSPSNG00000001263) BOLA1 (ENSPSNG00000001237) H2AC21 (ENSPSNG00000001218) H2AC20 (ENSPSNG00000001208) H2BC21 (ENSPSNG00000001199) ENSPSNG00000001182 ENSPSNG00000001168 ENSPSNG00000001160 ENSPSNG00000001148 ENSPSNG00000001132 ENSPSNG00000001122 H3-7 (ENSPSNG00000001054) H2BC18 (ENSPSNG00000001038) ENSPSNG00000001015 ##22 ENSPSNG00000000971 HJV (ENSPSNG00000000911) TXNIP (ENSPSNG00000000878) POLR3GL (ENSPSNG00000000850) ANKRD34A (ENSPSNG00000000834) LIX1L (ENSPSNG00000000812) ENSPSNG00000000786 PEX11B (ENSPSNG00000000744) ITGA10 (ENSPSNG00000000636) ANKRD35 (ENSPSNG00000000537) PIAS3 (ENSPSNG00000000478) NUDT17 (ENSPSNG00000000422) POLR3C (ENSPSNG00000000389) RNF115 (ENSPSNG00000000340) ENSPSNG00000000296 Monodontidae ANCESTRAL SPECIES ENSGT00530000063760.b ENSGT00550000075028.w.a ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.a.b ENSGT01100000263559.A.f ENSGT01060000248528.b.jh.b ENSGT01100000263506.a.e.a.a.a.a.a ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 ENSGT00950000182849.A.f.b Narwhal MODERN SPECIES 304 PLEKHO1 (ENSMMNG00015000265) ENSMMNG00015000303 OTUD7B (ENSMMNG00015000357) MTMR11 (ENSMMNG00015000420) SF3B4 (ENSMMNG00015000508) SV2A (ENSMMNG00015000538) BOLA1 (ENSMMNG00015000565) H2AC21 (ENSMMNG00015000574) H2AC20 (ENSMMNG00015000583) ENSMMNG00015000589 ENSMMNG00015000597 ENSMMNG00015000609 ENSMMNG00015000624 H3C13 (ENSMMNG00015000641) H2BC18 (ENSMMNG00015000651) ENSMMNG00015000669 ##22 ENSMMNG00015000699 HJV (ENSMMNG00015000764) TXNIP (ENSMMNG00015000791) ENSMMNG00015000840 ANKRD34A (ENSMMNG00015000874) LIX1L (ENSMMNG00015000890) RBM8A (ENSMMNG00015000918) PEX11B (ENSMMNG00015000972) ITGA10 (ENSMMNG00015001059) ANKRD35 (ENSMMNG00015001213) PIAS3 (ENSMMNG00015001315) NUDT17 (ENSMMNG00015001410) POLR3C (ENSMMNG00015001448) RNF115 (ENSMMNG00015001502) PDZK1 (ENSMMNG00015001570) Beluga whale MODERN SPECIES 99 ANP32E (ENSDLEG00000009954) PLEKHO1 (ENSDLEG00000009972) VPS45 (ENSDLEG00000009999) ENSDLEG00000010020 OTUD7B (ENSDLEG00000010038) MTMR11 (ENSDLEG00000010078) SF3B4 (ENSDLEG00000010135) SV2A (ENSDLEG00000010159) BOLA1 (ENSDLEG00000010185) ENSDLEG00000010198 H2AC21 (ENSDLEG00000010209) ENSDLEG00000010220 ENSDLEG00000010243 H3-7 (ENSDLEG00000010255) H2BC18 (ENSDLEG00000010273) ENSDLEG00000010280 ##22 ENSDLEG00000010319 Laurasiatheria_b ANCESTRAL SPECIES ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT01100000263514.A.e.a.b.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263506.a.e.a.a.b.a ENSGT01060000248528.b.jh.a.a.b ENSGT01100000263559.A.e.a ENSGT01100000263506.a.e.a.a.a.a.b.a ENSGT00940000153125.C ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153125.E.c.b ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT00940000153125.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.b ENSGT01100000263559.B ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263575.B.u ENSGT00940000153125.D.a.a ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Equus ANCESTRAL SPECIES 3 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT01100000263506.a.e.b ENSGT01100000263559.A.f ENSGT00940000153092.a.b.e.a.a ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263575.A ENSGT00940000163036.g.a.a.a ENSGT01060000248528.b.jh.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.a ENSGT00940000160426 ENSGT01100000263567.a.a ENSGT01060000248528.b.jh.b ENSGT01060000248528.b.kh.yb.d ENSGT00940000155501.a.b Donkey MODERN SPECIES 17 RNF115 (ENSEASG00005007412) POLR3C (ENSEASG00005007417) NUDT17 (ENSEASG00005007420) PIAS3 (ENSEASG00005007424) ANKRD35 (ENSEASG00005007430) ITGA10 (ENSEASG00005007436) PEX11B (ENSEASG00005032013) ENSEASG00005007451 RBM8A (ENSEASG00005007455) LIX1L (ENSEASG00005007459) ANKRD34A (ENSEASG00005007463) POLR3GL (ENSEASG00005007466) TXNIP (ENSEASG00005007477) ENSEASG00005025106 ENSEASG00005037767 ENSEASG00005002130 ##22 ENSEASG00005002125 ENSEASG00005037866 ENSEASG00005036493 ENSEASG00005027933 ENSEASG00005033525 ENSEASG00005026834 ENSEASG00005025005 H2AC21 (ENSEASG00005032093) ENSEASG00005001466 SV2A (ENSEASG00005001472) SF3B4 (ENSEASG00005001477) MTMR11 (ENSEASG00005001485) OTUD7B (ENSEASG00005001503) ENSEASG00005027301 VPS45 (ENSEASG00005001512) Horse MODERN SPECIES 26 POLR3C (ENSECAG00000023713) NUDT17 (ENSECAG00000023259) PIAS3 (ENSECAG00000017540) ANKRD35 (ENSECAG00000016226) ITGA10 (ENSECAG00000008533) PEX11B (ENSECAG00000002265) GNRHR2 (ENSECAG00000023497) RBM8A (ENSECAG00000022024) ENSECAG00000046198 LIX1L (ENSECAG00000020654) ANKRD34A (ENSECAG00000002458) TXNIP (ENSECAG00000028144) HJV (ENSECAG00000028996) POLR3GL (ENSECAG00000015900) ENSECAG00000037385 ENSECAG00000013941 ##22 ENSECAG00000013628 ENSECAG00000014464 ENSECAG00000037030 H2BC18 (ENSECAG00000044618) ENSECAG00000046705 H2BC19 (ENSECAG00000043501) H2BC20 (ENSECAG00000053797) H2AC19 (ENSECAG00000043631) ENSECAG00000054279 H2BC20 (ENSECAG00000060054) H2AC20 (ENSECAG00000049520) BOLA1 (ENSECAG00000034826) SV2A (ENSECAG00000007414) MTMR11 (ENSECAG00000023282) OTUD7B (ENSECAG00000019449) Carnivora ANCESTRAL SPECIES 1 ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.b ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Caniformia ANCESTRAL SPECIES 31 ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01060000248528.b.kh.yb.c.a ENSGT01100000263559.A.f ENSGT01060000248528.b.jh.a.b ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Canidae ANCESTRAL SPECIES 18 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01060000248528.b.kh.yb.c.a ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263883 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00910000145379 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Canis_lupus ANCESTRAL SPECIES 10 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000156302 ENSGT01100000263575.B.u ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263883 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00910000145379 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Dingo MODERN SPECIES 223 SF3B4 (ENSCAFG00020019775) SV2A (ENSCAFG00020019781) BOLA1 (ENSCAFG00020019784) ENSCAFG00020019789 H2AC21 (ENSCAFG00020019793) ENSCAFG00020019797 ENSCAFG00020019814 ENSCAFG00020019823 ENSCAFG00020019846 ENSCAFG00020019848 ENSCAFG00020019854 ENSCAFG00020019867 ENSCAFG00020019897 H2BC18 (ENSCAFG00020019901) FCGR1A (ENSCAFG00020019916) ENSCAFG00020019917 ##22 ENSCAFG00020019918 HJV (ENSCAFG00020019923) TXNIP (ENSCAFG00020019925) ENSCAFG00020019930 ANKRD34A (ENSCAFG00020019941) LIX1L (ENSCAFG00020019943) RBM8A (ENSCAFG00020019945) ENSCAFG00020019946 PEX11B (ENSCAFG00020019947) ITGA10 (ENSCAFG00020019948) ANKRD35 (ENSCAFG00020019974) PIAS3 (ENSCAFG00020019985) NUDT17 (ENSCAFG00020020055) POLR3C (ENSCAFG00020020066) RNF115 (ENSCAFG00020020068) Dog MODERN SPECIES 8 APH1A (ENSCAFG00845016683) CA14 (ENSCAFG00845016587) ANP32E (ENSCAFG00845012804) PLEKHO1 (ENSCAFG00845012601) VPS45 (ENSCAFG00845012364) OTUD7B (ENSCAFG00845012281) MTMR11 (ENSCAFG00845012198) SF3B4 (ENSCAFG00845012146) SV2A (ENSCAFG00845012074) ENSCAFG00845012017 ENSCAFG00845011998 ENSCAFG00845011880 ENSCAFG00845011830 ENSCAFG00845011803 FCGR1A (ENSCAFG00845011691) ENSCAFG00845011630 ##22 ENSCAFG00845011593 ENSCAFG00845011506 TXNIP (ENSCAFG00845011435) POLR3GL (ENSCAFG00845011382) ANKRD34A (ENSCAFG00845011351) LIX1L (ENSCAFG00845011297) RBM8A (ENSCAFG00845011260) ENSCAFG00845011225 PEX11B (ENSCAFG00845011163) ITGA10 (ENSCAFG00845010945) ANKRD35 (ENSCAFG00845010809) NUDT17 (ENSCAFG00845010768) POLR3C (ENSCAFG00845010680) ENSCAFG00845010635 RNF115 (ENSCAFG00845010343) Red fox MODERN SPECIES 176 ENSVVUG00000007839 PLEKHO1 (ENSVVUG00000007828) VPS45 (ENSVVUG00000007786) OTUD7B (ENSVVUG00000007773) MTMR11 (ENSVVUG00000007745) ENSVVUG00000007732 SV2A (ENSVVUG00000007726) BOLA1 (ENSVVUG00000007718) H2AC21 (ENSVVUG00000007714) H2AC20 (ENSVVUG00000007707) H2BC21 (ENSVVUG00000007671) ENSVVUG00000007660 H3-7 (ENSVVUG00000007640) H2BC18 (ENSVVUG00000007606) ENSVVUG00000007601 ENSVVUG00000007595 ##22 ENSVVUG00000007591 FCGR1A (ENSVVUG00000007556) ENSVVUG00000007552 HJV (ENSVVUG00000007529) TXNIP (ENSVVUG00000007524) POLR3GL (ENSVVUG00000007497) ANKRD34A (ENSVVUG00000007494) LIX1L (ENSVVUG00000007490) RBM8A (ENSVVUG00000007486) PEX11B (ENSVVUG00000007477) ITGA10 (ENSVVUG00000007459) ANKRD35 (ENSVVUG00000007450) PIAS3 (ENSVVUG00000007435) NUDT17 (ENSVVUG00000007427) POLR3C (ENSVVUG00000007421) Caniformia_b ANCESTRAL SPECIES 35 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f ENSGT00940000156302 ENSGT01100000263506.a.e.a.a.a.a.b.a ENSGT01060000248528.b.jh.a.b ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Mustelinae ANCESTRAL SPECIES 81 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f Ferret MODERN SPECIES 398 C1orf54 (ENSMPUG00000005317) CA14 (ENSMPUG00000005329) ANP32E (ENSMPUG00000005343) PLEKHO1 (ENSMPUG00000005354) VPS45 (ENSMPUG00000005390) OTUD7B (ENSMPUG00000005404) MTMR11 (ENSMPUG00000005535) SF3B4 (ENSMPUG00000005563) SV2A (ENSMPUG00000005578) H2AC21 (ENSMPUG00000018422) H2AC20 (ENSMPUG00000018423) H2BC21 (ENSMPUG00000018424) ENSMPUG00000018425 H2BC18 (ENSMPUG00000005595) FCGR1A (ENSMPUG00000005605) ENSMPUG00000005618 ##22 ENSMPUG00000005632 American mink MODERN SPECIES 530 SV2A (ENSNVIG00000003188) BOLA1 (ENSNVIG00000003246) H2AC21 (ENSNVIG00000003251) H2AC20 (ENSNVIG00000003252) ENSNVIG00000003258 ENSNVIG00000003275 ENSNVIG00000003279 ENSNVIG00000003286 ENSNVIG00000003349 ENSNVIG00000003397 ENSNVIG00000003399 H4 (ENSNVIG00000003408) ENSNVIG00000003413 H2BC18 (ENSNVIG00000003417) ENSNVIG00000003430 ENSNVIG00000003436 ##22 ENSNVIG00000003455 ENSNVIG00000003483 Ursidae ANCESTRAL SPECIES ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263575.A ENSGT01060000248528.b.jh.a.b ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263883 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185.p ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Ursus ANCESTRAL SPECIES 290 ENSGT01060000248528.b.jh.a.b ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f American black bear MODERN SPECIES 234 MTMR11 (ENSUAMG00000022467) SF3B4 (ENSUAMG00000022468) SV2A (ENSUAMG00000022469) BOLA1 (ENSUAMG00000022470) ENSUAMG00000022471 H2AC21 (ENSUAMG00000022472) ENSUAMG00000022473 ENSUAMG00000022483 ENSUAMG00000022505 ENSUAMG00000022508 ENSUAMG00000022509 ENSUAMG00000022510 H3C13 (ENSUAMG00000022511) H2BC18 (ENSUAMG00000022512) FCGR1A (ENSUAMG00000022513) ENSUAMG00000022514 ##22 ENSUAMG00000022516 Polar bear MODERN SPECIES 193 MTMR11 (ENSUMAG00000003794) SF3B4 (ENSUMAG00000003802) SV2A (ENSUMAG00000003804) H2AC21 (ENSUMAG00000003816) ENSUMAG00000003822 ENSUMAG00000003825 ENSUMAG00000003829 ENSUMAG00000003836 ENSUMAG00000003882 ENSUMAG00000003899 ENSUMAG00000003922 ENSUMAG00000003931 ENSUMAG00000003935 H2BC18 (ENSUMAG00000003946) FCGR1A (ENSUMAG00000003967) ENSUMAG00000003983 ##22 ENSUMAG00000003995 Giant Panda MODERN SPECIES 1 THOC6 (ENSAMEG00000005505) HCFC1R1 (ENSAMEG00000005504) TNFRSF12A (ENSAMEG00000005502) CLDN6 (ENSAMEG00000005497) CLDN9 (ENSAMEG00000002158) ENSAMEG00000024596 ENSAMEG00000028399 PKMYT1 (ENSAMEG00000008397) PAQR4 (ENSAMEG00000008392) KREMEN2 (ENSAMEG00000030128) FLYWCH1 (ENSAMEG00000008370) ENSAMEG00000018761 ENSAMEG00000018018 ENSAMEG00000028244 ENSAMEG00000029633 ENSAMEG00000006953 ##22 ENSAMEG00000026772 ENSAMEG00000018005 ENSAMEG00000018013 ENSAMEG00000025992 ENSAMEG00000017998 ENSAMEG00000030236 PDPK1 (ENSAMEG00000017982) ATP6V0C (ENSAMEG00000017988) TBC1D24 (ENSAMEG00000017974) NTN3 (ENSAMEG00000026742) TEDC2 (ENSAMEG00000017912) ENSAMEG00000017945 ENSAMEG00000023851 ENSAMEG00000017914 ABCA3 (ENSAMEG00000017862) Felidae ANCESTRAL SPECIES 10 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT00940000153118.db.a.b ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT01060000248528.b.kh.yb.d ENSGT00940000155501.a.b.e.b ENSGT01100000263567.a.b ENSGT01060000248528.b.kh.xb.b.b ENSGT01100000263559.B ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00390000016972.a.b.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00910000145379 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Panthera ANCESTRAL SPECIES 40 ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01060000248528.b.jh.b ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00390000016972.a.b.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f Panthera_a ANCESTRAL SPECIES 79 ENSGT01100000263504.a.b.b.b.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B ENSGT01060000248528.b.jh.b ENSGT01100000263559.A.f ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00390000016972.a.b.b ENSGT00950000183190.a.b.a.b ##22 ENSGT00420000029746.f leopard MODERN SPECIES 149 BOLA1 (ENSPPRG00000016802) H2AC21 (ENSPPRG00000016850) ENSPPRG00000016865 ENSPPRG00000016879 H2AC20 (ENSPPRG00000016889) H2BC21 (ENSPPRG00000016907) H2AC19 (ENSPPRG00000016923) ENSPPRG00000017082 ENSPPRG00000017282 ENSPPRG00000017308 ENSPPRG00000017324 H3C13 (ENSPPRG00000017364) H2BC18 (ENSPPRG00000011510) FCGR1A (ENSPPRG00000012934) ENSPPRG00000013069 ENSPPRG00000013639 ##22 lion MODERN SPECIES 258 ENSPLOG00000019966 H3-7 (ENSPLOG00000019985) H2BC18 (ENSPLOG00000020001) FCGR1A (ENSPLOG00000020037) ENSPLOG00000020126 ENSPLOG00000020136 ##22 ENSPLOG00000020168 Tiger MODERN SPECIES 275 PLEKHO1 (ENSPTIG00000018948) VPS45 (ENSPTIG00000018151) OTUD7B (ENSPTIG00000017376) MTMR11 (ENSPTIG00000014650) SF3B4 (ENSPTIG00000014530) SV2A (ENSPTIG00000013557) BOLA1 (ENSPTIG00000004599) H2AC21 (ENSPTIG00000004596) ENSPTIG00000004585 ENSPTIG00000011928 ENSPTIG00000004051 ENSPTIG00000004012 H2BC18 (ENSPTIG00000009410) FCGR1A (ENSPTIG00000009323) ENSPTIG00000003933 ENSPTIG00000008412 ##22 ENSPTIG00000007301 Cat MODERN SPECIES 239 ANP32E (ENSFCAG00000022278) PLEKHO1 (ENSFCAG00000035563) VPS45 (ENSFCAG00000010112) OTUD7B (ENSFCAG00000010110) MTMR11 (ENSFCAG00000010108) SF3B4 (ENSFCAG00000010106) ENSFCAG00000051403 SV2A (ENSFCAG00000010104) H2BC19 (ENSFCAG00000044074) ENSFCAG00000047792 H4C14 (ENSFCAG00000023368) H3C13 (ENSFCAG00000045408) H2BC18 (ENSFCAG00000046241) FCGR1A (ENSFCAG00000027331) ENSFCAG00000044482 ENSFCAG00000025610 ##22 ENSFCAG00000031642 HJV (ENSFCAG00000043881) TXNIP (ENSFCAG00000029919) POLR3GL (ENSFCAG00000005410) ANKRD34A (ENSFCAG00000002723) LIX1L (ENSFCAG00000033679) RBM8A (ENSFCAG00000033936) PEX11B (ENSFCAG00000030808) ITGA10 (ENSFCAG00000005415) ANKRD35 (ENSFCAG00000005416) PIAS3 (ENSFCAG00000031238) NUDT17 (ENSFCAG00000022065) POLR3C (ENSFCAG00000013360) RNF115 (ENSFCAG00000039680) CD160 (ENSFCAG00000013367) Vertebrata ANCESTRAL SPECIES ENSGT00950000183190.a.b.b ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183190.a.b.b ##22 Elephant shark MODERN SPECIES 1526 ncf2 (ENSCMIG00000017513) ENSCMIG00000017512 ENSCMIG00000017509 arpc5b (ENSCMIG00000017504) pla2g4aa (ENSCMIG00000017464) ptgs2b (ENSCMIG00000017023) pdcb (ENSCMIG00000016854) ENSCMIG00000016848 kifap3b (ENSCMIG00000016823) ntmt2 (ENSCMIG00000016804) ENSCMIG00000016800 prrx1b (ENSCMIG00000016794) ENSCMIG00000016789 ##22 ENSCMIG00000016787 ##22 ENSCMIG00000016785 ##22 ENSCMIG00000016783 ##22 PRKAB2 (ENSCMIG00000016779) scyl3 (ENSCMIG00000016774) si:dkey-97o5.1 (ENSCMIG00000016772) si:dkey-51e6.1 (ENSCMIG00000016769) SELE (ENSCMIG00000016768) ENSCMIG00000016753 dusp12 (ENSCMIG00000016750) ENSCMIG00000016729 NPHS2 (ENSCMIG00000016707) ##9 ENSCMIG00000016701 ENSCMIG00000016694 soat1 (ENSCMIG00000016631) abl2 (ENSCMIG00000016574) tor3a (ENSCMIG00000016542) ACBD6 (ENSCMIG00000016540) Euteleostomi ANCESTRAL SPECIES ENSGT00950000183190.a.b.b ##22 Actinopterygii ANCESTRAL SPECIES 70 ENSGT00940000157157.b ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000169810 ENSGT00940000156880 ENSGT00940000155161 ENSGT00390000008829 ENSGT00940000162916 ENSGT00940000157702 ENSGT00940000162230 #19 ENSGT00390000013040 #18 ENSGT00940000163466 ENSGT00940000164473 ENSGT00940000163579 ENSGT00940000153189.B ENSGT00950000183190.a.b.b ##22 ENSGT00390000011509 ENSGT00390000008732.b ENSGT00940000159569 ENSGT00390000010743.b ENSGT00910000145076 ENSGT00390000005084 ENSGT00390000013765 ENSGT00940000156868.g ENSGT00390000018089 ENSGT00390000008938 ENSGT00950000182969.A ENSGT00940000157920.a ENSGT00940000157685 ENSGT00940000157216 ENSGT00940000163543 Reedfish MODERN SPECIES 17 lonp2 (ENSECRG00000013033) il34 (ENSECRG00000013016) sf3b3 (ENSECRG00000012961) cog4 (ENSECRG00000012849) FCSK (ENSECRG00000012755) st3gal2 (ENSECRG00000012730) aars1 (ENSECRG00000012691) exosc6 (ENSECRG00000012675) ENSECRG00000012661 ENSECRG00000012474 B3GALT9 (ENSECRG00000012359) #19 psmd5 (ENSECRG00000012320) #18 ENSECRG00000012297 zgc:101858 (ENSECRG00000012270) PPIL3 (ENSECRG00000012237) ENSECRG00000012050 ##22 ENSECRG00000011964 rpl28 (ENSECRG00000011937) pdcl (ENSECRG00000011923) PTGS1 (ENSECRG00000011891) ENSECRG00000011876 mrrf (ENSECRG00000011864) rbm18 (ENSECRG00000011852) lhx6a (ENSECRG00000011822) morn5 (ENSECRG00000011802) ndufa8 (ENSECRG00000011788) si:ch211-243g18.2 (ENSECRG00000011765) ENSECRG00000011752 zbtb26 (ENSECRG00000011741) RC3H2 (ENSECRG00000011691) RABGAP1 (ENSECRG00000011592) Neopterygii ANCESTRAL SPECIES 65 ENSGT00950000182975.a.a.b ENSGT00940000169810 ENSGT00940000156880 ENSGT00940000155161 ENSGT00390000008829 ENSGT00940000162916 ENSGT00940000157702 ENSGT00940000162230 #19 ENSGT00390000013040 #18 ENSGT00940000162727 ENSGT00940000167622 ENSGT00940000163466 ENSGT00940000164473 ENSGT00940000163579 ENSGT00940000153189.B ENSGT00950000183190.a.b.b ##22 ENSGT00390000011509 ENSGT00390000008732.b ENSGT00940000159569 ENSGT00390000010743.b ENSGT00390000005084 ENSGT00390000013765 ENSGT00940000156868.g ENSGT00390000018089 ENSGT00390000008938 ENSGT00950000182969.A ENSGT00940000157920.a ENSGT00940000157685 ENSGT00940000157216 ENSGT00940000163543 ENSGT00940000154687.B Osteoglossocephalai ANCESTRAL SPECIES 138 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b ENSGT00940000156880.c.a ENSGT00940000169810 ENSGT00940000156880.c.b ENSGT00940000162230 #19 ENSGT00390000013040 #18 ENSGT00940000162727 ENSGT00940000163466 ENSGT00950000183190.a.b.b ##22 Osteoglossiformes ANCESTRAL SPECIES 65 ENSGT00940000177220 ENSGT00390000005084 ENSGT00390000010743.b.a.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b ENSGT00940000156880.c.b ENSGT00940000162230 #19 ENSGT00390000013040 #18 ENSGT00940000162727 ENSGT00940000163466 ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 Asian bonytongue MODERN SPECIES 21 rbm18 (ENSSFOG00015032292) ENSSFOG00015001145 mrrf (ENSSFOG00015001131) ptgs1 (ENSSFOG00015001194) pdcl (ENSSFOG00015001272) rpl28 (ENSSFOG00015025883) ENSSFOG00015001322 inpp5e (ENSSFOG00015001342) ENSSFOG00015001350 notch1a (ENSSFOG00015001412) camsap1b (ENSSFOG00015001555) KCNT1 (ENSSFOG00015001645) B3GALT9 (ENSSFOG00015001800) #19 psmd5 (ENSSFOG00015001808) #18 ENSSFOG00015026061 cdk5rap2 (ENSSFOG00015027218) ##22 NUP188 (ENSSFOG00015002217) dolk (ENSSFOG00015002380) phyhd1 (ENSSFOG00015002401) lrrc8aa (ENSSFOG00015002447) dnlz (ENSSFOG00015002456) uck1 (ENSSFOG00015002485) rapgef1b (ENSSFOG00015002536) NTNG2 (ENSSFOG00015002724) SETX (ENSSFOG00015002765) dolpp1 (ENSSFOG00015002773) miga2 (ENSSFOG00015002799) st6galnac4 (ENSSFOG00015002851) ST6GALNAC6 (ENSSFOG00015002859) spout1 (ENSSFOG00015002867) ENSSFOG00015027786 Clupeocephala ANCESTRAL SPECIES 254 ENSGT00940000164047.c.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000167622 ENSGT00940000162727.a.b ENSGT00940000163466 ENSGT00950000183190.a.b.b ##22 Otomorpha ANCESTRAL SPECIES 305 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00390000013040 #18 ENSGT00940000162727.a.b ENSGT00940000167622 ENSGT00940000163466 ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 Otophysi ANCESTRAL SPECIES 124 ENSGT00390000013040 #18 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00940000155227.a ENSGT00940000156090.b ENSGT01000000214630 ENSGT00550000074846 ENSGT00390000006029 ENSGT00390000016167 ENSGT00940000156997.b ENSGT00940000162230 #19 ENSGT00940000156880.c.a ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 Characiphysae ANCESTRAL SPECIES 68 ENSGT00390000013040 #18 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00940000155227.a ENSGT00940000156090.b ENSGT01000000214630 ENSGT00550000074846 ENSGT00390000006029 ENSGT00390000016167 ENSGT00940000156997.b ENSGT00940000162230 #19 ENSGT00940000156880.c.a ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 Channel catfish MODERN SPECIES 9 LOXHD1 (ENSIPUG00000005125) st8sia5 (ENSIPUG00000005289) rpl37 (ENSIPUG00000005347) thbs4b (ENSIPUG00000005393) Dnajb5 (ENSIPUG00000005496) hwa (ENSIPUG00000005509) atp5a1 (ENSIPUG00000005528) haus1 (ENSIPUG00000005565) c18h18orf25 (ENSIPUG00000005582) rnf165 (ENSIPUG00000005596) B3GALT9 (ENSIPUG00000005634) #19 KCNT1 (ENSIPUG00000005645) notch1a (ENSIPUG00000005717) camsap1a (ENSIPUG00000005748) ENSIPUG00000005821 cdk5rap2 (ENSIPUG00000005846) ##22 gcnt4 (ENSIPUG00000005958) gnrh2 (ENSIPUG00000005968) ptpra (ENSIPUG00000005987) idh3b (ENSIPUG00000006085) p2rx4a (ENSIPUG00000006157) gstt1b (ENSIPUG00000006312) ddt (ENSIPUG00000006353) CHCHD10 (ENSIPUG00000006362) Scamp1 (ENSIPUG00000006389) tor1 (ENSIPUG00000006420) nsa2 (ENSIPUG00000006440) spout1 (ENSIPUG00000006486) st6galnac6 (ENSIPUG00000006510) St6galnac3 (ENSIPUG00000006524) fam73b (ENSIPUG00000006553) Characiphysae_b ANCESTRAL SPECIES 73 ENSGT00390000013040 #18 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00940000155227.a ENSGT00940000156090.b ENSGT01000000214630 ENSGT00550000074846 ENSGT00390000006029 ENSGT00390000016167 ENSGT00940000156997.b ENSGT00940000162230 #19 ENSGT00940000156880.c.a ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 Characoidei ANCESTRAL SPECIES 67 ENSGT00390000013040 #18 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00940000155227.a ENSGT00940000156090.b ENSGT01000000214630 ENSGT00550000074846 ENSGT00390000006029 ENSGT00390000016167 ENSGT00940000156997.b ENSGT00940000162230 #19 ENSGT00940000156880.c.a ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 Mexicana tetra MODERN SPECIES 5 thbs4b (ENSAMXG00000014685) zgc:122979 (ENSAMXG00000014680) hwa (ENSAMXG00000014677) atp5fa1 (ENSAMXG00000014670) haus1 (ENSAMXG00000014661) zgc:77838 (ENSAMXG00000014654) RNF165 (ENSAMXG00000042584) B3GALT9 (ENSAMXG00000026355) #19 ENSAMXG00000014641 KCNT1 (ENSAMXG00000014615) notch1a (ENSAMXG00000014597) camsap1a (ENSAMXG00000014589) ENSAMXG00000031682 ENSAMXG00000030624 ENSAMXG00000039991 cdk5rap2 (ENSAMXG00000014572) ##22 NUP188 (ENSAMXG00000014559) dolk (ENSAMXG00000026354) ENSAMXG00000040346 phyhd1 (ENSAMXG00000014542) lrrc8aa (ENSAMXG00000014522) dnlz (ENSAMXG00000032493) uck1 (ENSAMXG00000014494) rapgef1b (ENSAMXG00000014464) NTNG2 (ENSAMXG00000042670) ENSAMXG00000040804 ENSAMXG00000038676 ENSAMXG00000029525 ENSAMXG00000030011 SETX (ENSAMXG00000014406) dolpp1 (ENSAMXG00000032913) Red-bellied piranha MODERN SPECIES 1077 notch1a (ENSPNAG00000010169) camsap1a (ENSPNAG00000010194) cdk5rap2 (ENSPNAG00000010275) ##22 Electric eel MODERN SPECIES 1356 ENSEEEG00000000353 ENSEEEG00000000346 cdk5rap2 (ENSEEEG00000000255) ##22 Cyprinoidei ANCESTRAL SPECIES 102 ENSGT01030000234535.C.c ENSGT00390000005254 ENSGT01000000214630 ENSGT00940000156090.b ENSGT00940000155227.a ENSGT00550000074846 ENSGT00390000006029 ENSGT00390000016167 ENSGT00940000156997.b ENSGT00940000162230 #19 ENSGT00940000156880.d ENSGT00940000155199.e.b ENSGT00940000156880.c.a ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 568 ENSGT00390000008220.e.a ENSGT00950000183190.a.b.b.a ##22 ENSGT00390000005742.v ENSGT00390000004067.i ENSGT00390000006287.m ENSGT00940000154043.A.j.b.c.b ENSGT00390000008220.e.b ENSGT01020000230412.A.c.a.e ENSGT00940000156235.c.a.e ENSGT00940000153601.a.a.e.b.a.g ENSGT00940000160918.b ENSGT00390000013112.b ENSGT00390000008565.a.q ENSGT00940000157958.h ENSGT00940000160114.i ENSGT00390000016537.n ENSGT00390000018706.i Cyprininae_a ANCESTRAL SPECIES 240 ENSGT01000000214630.d ENSGT00940000156090.b.e ENSGT00940000155227.a.e ENSGT00550000074846.fb.a ENSGT00390000006029.`b ENSGT00390000016167.n.b ENSGT00940000156997.b.d ENSGT00940000162230.c #19 ENSGT00940000156880.d ENSGT00940000156880.c.a.c ENSGT00940000157157.b.a.b.d ENSGT00950000182975.a.a.b.l.f ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.a.a.b.a.a.a ENSGT00950000183190.a.b.b.a ##22 ENSGT00390000005742.v ENSGT00390000004067.i ENSGT00390000006287.m ENSGT00940000154043.A.j.b.d ENSGT00940000154043.A.j.b.c.a ENSGT00390000008220.e.a ENSGT00390000008220.e.b ENSGT01020000230412.A.c.a.e ENSGT00940000156235.c.a.e ENSGT00940000153601.a.a.e.b.a.g ENSGT00940000160918.b ENSGT00390000013112.b ENSGT00390000008565.a.q ENSGT00940000157958.h ENSGT00940000160114.i Common carp reference MODERN SPECIES 45 hwa (ENSCCRG00000025229) zgc:122979 (ENSCCRG00000077918) thbs4b (ENSCCRG00000053509) atp5fa1 (ENSCCRG00000067873) haus1 (ENSCCRG00000063333) zgc:77838 (ENSCCRG00000042938) RNF165 (ENSCCRG00000075967) ENSCCRG00000035293 #19 ENSCCRG00000055216 ENSCCRG00000019257 notch1a (ENSCCRG00000019731) ENSCCRG00000020122 ENSCCRG00000019835 ENSCCRG00000019824 ENSCCRG00000020126 cdk5rap2 (ENSCCRG00000000618) ##22 NUP188 (ENSCCRG00000040401) dolk (ENSCCRG00000082757) phyhd1 (ENSCCRG00000067601) lrrc8aa (ENSCCRG00000072268) dnlz (ENSCCRG00000039290) uck1 (ENSCCRG00000044796) rapgef1b (ENSCCRG00000048325) NTNG2 (ENSCCRG00000068996) SETX (ENSCCRG00000081183) dolpp1 (ENSCCRG00000048407) miga2 (ENSCCRG00000048412) ENSCCRG00000015671 spout1 (ENSCCRG00000028874) nsa2 (ENSCCRG00000039734) tor1 (ENSCCRG00000007313) Golden-line barbel MODERN SPECIES 72 ENSSGRG00000045217 ENSSGRG00000045229 ENSSGRG00000045334 zgc:122979 (ENSSGRG00000045341) thbs4b (ENSSGRG00000045345) atp5fa1 (ENSSGRG00000045480) haus1 (ENSSGRG00000045840) C18orf25 (ENSSGRG00000045842) RNF165 (ENSSGRG00000045843) B3GALT9 (ENSSGRG00000045845) #19 ENSSGRG00000045846 ENSSGRG00000045847 notch1a (ENSSGRG00000045853) camsap1a (ENSSGRG00000045915) pimr128 (ENSSGRG00000045931) cdk5rap2 (ENSSGRG00000045935) ##22 NUP188 (ENSSGRG00000045941) dolk (ENSSGRG00000046491) phyhd1 (ENSSGRG00000046493) lrrc8aa (ENSSGRG00000046607) ENSSGRG00000046608 dnlz (ENSSGRG00000046610) uck1 (ENSSGRG00000046611) rapgef1b (ENSSGRG00000046641) NTNG2 (ENSSGRG00000046667) ENSSGRG00000046668 ENSSGRG00000046669 SETX (ENSSGRG00000046672) dolpp1 (ENSSGRG00000046707) miga2 (ENSSGRG00000046749) st6galnac4 (ENSSGRG00000046753) Goldfish DUPLICATION Goldfish MODERN SPECIES 674 ENSCARG00000038635 ENSCARG00000038645 cdk5rap2 (ENSCARG00000038685) ##22 Goldfish MODERN SPECIES 13 ENSCARG00000008763 tor1 (ENSCARG00000008729) nsa2 (ENSCARG00000008670) spout1 (ENSCARG00000008610) ST6GALNAC6 (ENSCARG00000008562) miga2 (ENSCARG00000008549) ENSCARG00000008533 COL5A1 (ENSCARG00000041897) uck1 (ENSCARG00000041870) dnlz (ENSCARG00000041820) lrrc8aa (ENSCARG00000041793) phyhd1 (ENSCARG00000041574) dolk (ENSCARG00000041556) ENSCARG00000041540 cdk9 (ENSCARG00000041466) cdk5rap2 (ENSCARG00000041213) ##22 ENSCARG00000041169 ##22 dolk (ENSCARG00000041164) phyhd1 (ENSCARG00000041016) lrrc8aa (ENSCARG00000040985) dnlz (ENSCARG00000040974) rapgef1b (ENSCARG00000039866) ENSCARG00000039794 ENSCARG00000039782 ENSCARG00000039742 ENSCARG00000039722 si:ch211-241b2.4 (ENSCARG00000039711) ENSCARG00000039636 ENSCARG00000039622 hmgcrb (ENSCARG00000039397) CERT1 (ENSCARG00000034684) Cyprininae ANCESTRAL SPECIES 465 ENSGT00940000156090.b.f ENSGT00940000155227.a.f ENSGT00550000074846.fb.b ENSGT00390000006029.z ENSGT00390000016167.n.a ENSGT00940000156997.b.c ENSGT00940000162230.d #19 ENSGT00940000156880.c.a.d ENSGT00940000157157.b.a.b.c ENSGT00950000182975.a.a.b.l.e ENSGT00950000183190.a.b.b.b ##22 ENSGT00390000005742.u.a ENSGT00390000004067.j ENSGT00390000006287.n ENSGT00940000154043.A.j.b.c.a ENSGT00390000008220.f ENSGT01020000230412.A.c.a.f ENSGT00940000156235.c.a.f ENSGT00940000153601.a.a.e.b.a.h ENSGT00940000160918.a ENSGT00390000013112.a ENSGT00390000008565.a.r ENSGT00940000157958.g ENSGT00940000160114.j Goldfish MODERN SPECIES 40 ENSCARG00000035465 ENSCARG00000035489 ccng2 (ENSCARG00000035495) ccni (ENSCARG00000035503) ENSCARG00000035525 SHROOM3 (ENSCARG00000035534) ENSCARG00000035573 ENSCARG00000035581 ENSCARG00000035593 ENSCARG00000035604 ENSCARG00000035611 ENSCARG00000035630 ENSCARG00000035664 ENSCARG00000035690 ENSCARG00000035730 cdk5rap2 (ENSCARG00000035830) ##22 NUP188 (ENSCARG00000036053) dolk (ENSCARG00000036924) phyhd1 (ENSCARG00000036947) lrrc8aa (ENSCARG00000037273) dnlz (ENSCARG00000037291) uck1 (ENSCARG00000037311) rapgef1b (ENSCARG00000037541) NTNG2 (ENSCARG00000041225) ENSCARG00000041235 dolpp1 (ENSCARG00000041252) miga2 (ENSCARG00000041281) st6galnac4 (ENSCARG00000039859) ST6GALNAC6 (ENSCARG00000039862) nsa2 (ENSCARG00000039873) tor1 (ENSCARG00000039883) Cyprininae_a ANCESTRAL SPECIES 227 ENSGT01030000234535.C.c.a ENSGT00390000005254 ENSGT01030000234535.C.d ENSGT00940000165146 ENSGT01000000214630.c ENSGT00940000156090.b.f ENSGT00940000155227.a.f ENSGT00550000074846.fb.b ENSGT00390000006029.z ENSGT00390000016167.n.a ENSGT00940000156997.b.c ENSGT00940000162230.d #19 ENSGT00940000156880.c.a.d ENSGT00940000157157.b.a.b.c ENSGT00950000182975.a.a.b.l.e ENSGT00950000183190.a.b.b.b ##22 ENSGT00390000005742.u.a ENSGT00390000004067.j ENSGT00390000006287.n ENSGT00940000154043.A.i ENSGT01020000230412.A.c.a.f ENSGT00940000156235.c.a.f ENSGT00940000153601.a.a.e.b.a.h ENSGT00940000160918.a ENSGT00390000013112.a ENSGT00390000008565.a.r ENSGT00940000157958.g ENSGT00940000160114.j ENSGT00390000016537.n ENSGT00390000018706.i ENSGT00950000182888.a.a.a.h.a.a Golden-line barbel MODERN SPECIES 264 psmd5 (ENSSGRG00000019866) #18 ENSSGRG00000019988 st8sia5 (ENSSGRG00000019989) rpl37 (ENSSGRG00000019990) zgc:122979 (ENSSGRG00000019994) thbs4b (ENSSGRG00000020038) atp5fa1 (ENSSGRG00000022577) haus1 (ENSSGRG00000023222) zgc:77838 (ENSSGRG00000023223) RNF165 (ENSSGRG00000023224) B3GALT9 (ENSSGRG00000023225) #19 KCNT1 (ENSSGRG00000023227) notch1a (ENSSGRG00000023297) camsap1a (ENSSGRG00000025920) cdk5rap2 (ENSSGRG00000025936) ##22 ENSSGRG00000025937 ##22 dolk (ENSSGRG00000026028) phyhd1 (ENSSGRG00000026030) ENSSGRG00000026038 ENSSGRG00000026039 dnlz (ENSSGRG00000026042) uck1 (ENSSGRG00000026048) rapgef1b (ENSSGRG00000026145) NTNG2 (ENSSGRG00000026181) ENSSGRG00000026242 dolpp1 (ENSSGRG00000026244) miga2 (ENSSGRG00000026247) st6galnac4 (ENSSGRG00000026259) st6galnac4 (ENSSGRG00000026261) ST6GALNAC6 (ENSSGRG00000026262) Common carp reference MODERN SPECIES 38 st8sia5 (ENSCCRG00000058147) ENSCCRG00000052211 hwa (ENSCCRG00000052215) zgc:122979 (ENSCCRG00000071328) thbs4b (ENSCCRG00000042709) atp5fa1 (ENSCCRG00000058806) haus1 (ENSCCRG00000042917) zgc:77838 (ENSCCRG00000082272) RNF165 (ENSCCRG00000059086) ENSCCRG00000079707 #19 ENSCCRG00000035321 notch1a (ENSCCRG00000017890) camsap1a (ENSCCRG00000017875) ENSCCRG00000058198 ENSCCRG00000017073 cdk5rap2 (ENSCCRG00000017077) ##22 NUP188 (ENSCCRG00000017126) dolk (ENSCCRG00000077966) phyhd1 (ENSCCRG00000082685) rapgef1b (ENSCCRG00000014375) uck1 (ENSCCRG00000073756) NTNG2 (ENSCCRG00000062829) ENSCCRG00000017973 dolpp1 (ENSCCRG00000037753) miga2 (ENSCCRG00000037756) st6galnac4 (ENSCCRG00000067085) ENSCCRG00000039773 nsa2 (ENSCCRG00000028864) tor1 (ENSCCRG00000055539) scamp1 (ENSCCRG00000079310) ENSCCRG00000003856 Zebrafish MODERN SPECIES 13 st8sia5 (ENSDARG00000036584) rpl37 (ENSDARG00000034291) hwa (ENSDARG00000094542) zgc:122979 (ENSDARG00000004187) thbs4b (ENSDARG00000020072) atp5fa1 (ENSDARG00000010149) haus1 (ENSDARG00000058968) C21H18orf25 (ENSDARG00000046071) RNF165 (ENSDARG00000077906) B3GALT9 (ENSDARG00000094253) #19 ENSDARG00000090948 KCNT1 (ENSDARG00000079484) notch1a (ENSDARG00000103554) camsap1a (ENSDARG00000019208) ENSDARG00000086337 cdk5rap2 (ENSDARG00000024219) ##22 NUP188 (ENSDARG00000030022) dolk (ENSDARG00000076991) phyhd1 (ENSDARG00000029905) pimr166 (ENSDARG00000112108) ENSDARG00000109294 ENSDARG00000116627 ENSDARG00000115897 ENSDARG00000094878 ENSDARG00000115596 ENSDARG00000095687 ENSDARG00000113976 ENSDARG00000070138 ENSDARG00000115473 ENSDARG00000114913 ENSDARG00000110986 Clupeiformes ANCESTRAL SPECIES 436 ENSGT00390000013040 #18 ENSGT00940000163466 ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a Atlantic herring MODERN SPECIES 3 RABL6 (ENSCHAG00000003414) AJM1 (ENSCHAG00000003401) MAPKAP1 (ENSCHAG00000003113) ENSCHAG00000002486 mvb12ba (ENSCHAG00000002360) lmx1ba (ENSCHAG00000027553) rapgef1b (ENSCHAG00000027537) uck1 (ENSCHAG00000027526) dnlz (ENSCHAG00000027525) lrrc8aa (ENSCHAG00000027524) phyhd1 (ENSCHAG00000027521) dolk (ENSCHAG00000027518) NUP188 (ENSCHAG00000027461) psmd5 (ENSCHAG00000027446) #18 ENSCHAG00000027441 cdk5rap2 (ENSCHAG00000027434) ##22 egfl7 (ENSCHAG00000027423) agpat2 (ENSCHAG00000027419) dipk1b (ENSCHAG00000027416) mrps2 (ENSCHAG00000027415) ppp1r26 (ENSCHAG00000027413) olfm1b (ENSCHAG00000027400) ENSCHAG00000027391 ENSCHAG00000027384 FNBP1 (ENSCHAG00000027362) REXO4 (ENSCHAG00000027355) CACFD1 (ENSCHAG00000027349) ENSCHAG00000027346 ENSCHAG00000027345 ENSCHAG00000027341 cast (ENSCHAG00000027335) Euteleosteomorpha ANCESTRAL SPECIES 208 ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000167622 ENSGT00940000162727.a.b ENSGT00940000163466 ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.w.b Protacanthopterygii ANCESTRAL SPECIES 17 ENSGT00940000178900 ENSGT00530000063497.a.a ENSGT00940000156662.d ENSGT00940000158483 ENSGT00940000153877.a.a.b ENSGT00940000153464.A.a ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000157207.a.a ENSGT00450000040324.b ENSGT00940000156811.b ENSGT00390000001098 ENSGT00940000158633.a ENSGT00940000155841.c.b ENSGT00940000165164.f ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 Northern pike MODERN SPECIES 13 ENSELUG00000020963 ODF2 (ENSELUG00000021056) sptan1 (ENSELUG00000021139) dync2i2 (ENSELUG00000021173) setb (ENSELUG00000021202) uap1l1 (ENSELUG00000021217) zdhhc12b (ENSELUG00000021228) ENSELUG00000021353 slc25a25b (ENSELUG00000001110) naif1 (ENSELUG00000021476) eeig1b (ENSELUG00000021521) dpm2 (ENSELUG00000021540) PIP5KL1 (ENSELUG00000021638) sh3glb2b (ENSELUG00000021863) ENSELUG00000028060 cdk5rap2 (ENSELUG00000021996) ##22 NUP188 (ENSELUG00000022080) dolk (ENSELUG00000022101) phyhd1 (ENSELUG00000022238) lrrc8aa (ENSELUG00000034186) dnlz (ENSELUG00000022274) uck1 (ENSELUG00000030510) rapgef1b (ENSELUG00000022368) NTNG2 (ENSELUG00000022414) SETX (ENSELUG00000022453) SETX (ENSELUG00000022536) dolpp1 (ENSELUG00000022586) miga2 (ENSELUG00000022659) st6galnac4 (ENSELUG00000022673) ST6GALNAC6 (ENSELUG00000000966) spout1 (ENSELUG00000022737) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00950000183190.a.b.b.c.a ##22 Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00940000178900 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00940000165164.f ENSGT00950000183190.a.b.b.c.a ##22 ENSGT00950000183190.a.b.b.d ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e ENSGT00390000008220 ENSGT00940000154856.B.d.a.a ENSGT01020000230412.A.c.a.d ENSGT00940000156235.c.a.d ENSGT00940000153601.a.a.e.b.a.e.b ENSGT00940000160918 ENSGT00390000013112.c ENSGT00390000008565.a.o ENSGT00940000157958 ENSGT00940000160114.h Salmo ANCESTRAL SPECIES ENSGT00940000178900 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00940000165164.f ENSGT00950000183190.a.b.b.c.a ##22 ENSGT00950000183190.a.b.b.d ##22 ENSGT00390000005742.x.a ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e ENSGT00390000008220 ENSGT00940000154856.B.d.a.a ENSGT01020000230412.A.c.a.d ENSGT00940000156235.c.a.d ENSGT00940000153601.a.a.e.b.a.e.b ENSGT00940000160918 ENSGT00390000013112.c ENSGT00390000008565.a.o ENSGT00940000157958 ENSGT00940000160114.h Atlantic salmon MODERN SPECIES sptan1 (ENSSSAG00000056139) dync2i2 (ENSSSAG00000056027) setb (ENSSSAG00000071236) ENSSSAG00000055850 ENSSSAG00000050742 slc25a25b (ENSSSAG00000067692) NAIF1 (ENSSSAG00000086186) ENSSSAG00000085653 eeig1b (ENSSSAG00000088028) ENSSSAG00000047449 DPM2 (ENSSSAG00000047417) PIP5KL1 (ENSSSAG00000116681) ENSSSAG00000047400 sh3glb2b (ENSSSAG00000096134) ENSSSAG00000117881 ENSSSAG00000046803 ##22 dolk (ENSSSAG00000086677) nup188 (ENSSSAG00000040336) ENSSSAG00000046753 lrrc8a (ENSSSAG00000046745) dnlz (ENSSSAG00000100885) uck1 (ENSSSAG00000114791) rapgef1b (ENSSSAG00000035029) ENSSSAG00000089550 ENSSSAG00000108450 ENSSSAG00000104791 NTNG2 (ENSSSAG00000105472) SETX (ENSSSAG00000063584) dolpp1 (ENSSSAG00000113144) fam73b (ENSSSAG00000063462) st6galnac6 (ENSSSAG00000063425) Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00940000166931.f ENSGT00940000178900 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00950000183190.a.b.b.c.a ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e ENSGT00390000008220.g ENSGT00940000154856.B.d.a.a ENSGT00390000008220.h ENSGT01020000230412.A.c.a.d ENSGT00940000156235.c.a.d ENSGT00940000153601.a.a.e.b.a.e.b ENSGT00940000160918 ENSGT00390000013112.c ENSGT00390000008565.a.o ENSGT00940000157958 ENSGT00940000160114.h Rainbow trout MODERN SPECIES 26 ODF2 (ENSOMYG00000043316) sptan1 (ENSOMYG00000043696) dync2i2 (ENSOMYG00000044330) setb (ENSOMYG00000044338) ENSOMYG00000044345 ENSOMYG00000044443 slc25a25b (ENSOMYG00000044841) NAIF1 (ENSOMYG00000000050) eeig1b (ENSOMYG00000000140) ENSOMYG00000000180 dpm2 (ENSOMYG00000000196) PIP5KL1 (ENSOMYG00000030188) ENSOMYG00000069215 sh3glb2b (ENSOMYG00000000535) ENSOMYG00000073284 ENSOMYG00000000751 ##22 NUP188 (ENSOMYG00000001135) dolk (ENSOMYG00000001419) phyhd1 (ENSOMYG00000001455) lrrc8aa (ENSOMYG00000001481) dnlz (ENSOMYG00000058903) ENSOMYG00000037204 ENSOMYG00000001693 uck1 (ENSOMYG00000001574) rapgef1b (ENSOMYG00000002532) ENSOMYG00000069585 NTNG2 (ENSOMYG00000002706) ENSOMYG00000066741 SETX (ENSOMYG00000002879) ENSOMYG00000074758 dolpp1 (ENSOMYG00000002989) Salmoninae ANCESTRAL SPECIES 739 ENSGT00940000157207.a.a.h ENSGT00450000040324.b.l ENSGT00940000156811.b.c.a ENSGT00390000001098.j ENSGT00940000158633.a.d ENSGT00950000183190.a.b.b.c.b ##22 ENSGT00390000005742.w.a ENSGT00940000154043.A.j.b.f ENSGT01020000230412.A.c.a.c ENSGT00940000156235.c.a.c ENSGT00940000153601.a.a.e.b.a.f.b Salmoninae_a ANCESTRAL SPECIES 80 ENSGT00940000153181.m.b ENSGT00440000038585.c.d ENSGT00940000156340.a.d.d ENSGT00940000161345.d ENSGT00940000153877.a.a.b.c ENSGT00940000156662.d.h.b ENSGT00530000063497.a.a.c ENSGT00940000166931.e ENSGT00940000156902.b ENSGT00940000159428.f.b ENSGT00940000157207.a.a.h ENSGT00450000040324.b.l ENSGT00940000156811.b.c.a ENSGT00390000001098.j ENSGT00940000158633.a.d ENSGT00950000183190.a.b.b.c.b ##22 ENSGT00940000154043.A.j.b.f ENSGT01020000230412.A.c.a.c ENSGT00940000156235.c.a.c ENSGT00940000153601.a.a.e.b.a.e.a ENSGT00390000013112.d ENSGT00390000008565.a.p ENSGT00940000160114.g ENSGT00940000153294.e ENSGT00390000004339.r ENSGT00940000158829.e ENSGT00390000011980.b.b.d Oncorhynchus ANCESTRAL SPECIES 85 ENSGT00530000063187.A.g ENSGT00940000158674.g ENSGT00940000153181.m.b ENSGT00440000038585.c.d ENSGT00940000156340.a.d.d ENSGT00940000153877.a.a.b.c ENSGT00940000156662.d.h.b ENSGT00530000063497.a.a.c ENSGT00940000166931.e.a ENSGT00940000156902.b ENSGT00940000157207.a.a.h ENSGT00450000040324.b.l ENSGT00940000156811.b.c.a ENSGT00390000001098.j ENSGT00940000158633.a.d ENSGT00950000183190.a.b.b.c.b ##22 ENSGT00940000154043.A.j.b.f ENSGT01020000230412.A.c.a.c ENSGT00940000156235.c.a.c ENSGT00940000153601.a.a.e.b.a.e.a ENSGT00390000013112.d ENSGT00940000160114.g ENSGT00940000153294.e ENSGT00390000004339.r ENSGT00940000158829.e ENSGT00390000011980.b.b.d ENSGT01080000257489.e.b ENSGT01080000257489.e.a ENSGT00940000154290.b.e ENSGT00940000167011.b ENSGT00940000156317.w.a.f Oncorhynchus_a ANCESTRAL SPECIES 47 ENSGT00940000163205.d ENSGT00530000063187.A.g ENSGT00940000158674.g.b ENSGT00940000153181.m.b ENSGT00940000158674.g.a ENSGT00940000156340.a.d.d ENSGT00940000153877.a.a.b.c ENSGT00940000156662.d.h.b ENSGT00530000063497.a.a.c ENSGT00940000166931.e.a ENSGT00940000156902.b ENSGT00940000159428.f.b ENSGT00940000156811.b.c.a ENSGT00390000001098.j ENSGT00940000158633.a.d ENSGT00950000183190.a.b.b.c.b ##22 ENSGT00940000154043.A.j.b.f ENSGT01020000230412.A.c.a.c ENSGT00940000156235.c.a.c ENSGT00940000153601.a.a.e.b.a.e.a ENSGT00390000013112.d ENSGT00940000160114.g ENSGT00940000153294.e ENSGT00390000004339.r ENSGT00940000158829.e ENSGT00390000011980.b.b.d ENSGT01080000257489.e.b ENSGT01080000257489.e.a ENSGT00940000154290.b.e ENSGT00940000167011.b ENSGT00940000156317.w.a.f Chinook salmon MODERN SPECIES 26 dusp19a (ENSOTSG00005013594) nckap1 (ENSOTSG00005013606) frzb (ENSOTSG00005016702) dnajc10 (ENSOTSG00005016715) ENSOTSG00005020978 setb (ENSOTSG00005020980) sptan1 (ENSOTSG00005021008) ODF2 (ENSOTSG00005023733) ddt (ENSOTSG00005023830) zdhhc12b (ENSOTSG00005023832) ENSOTSG00005023838 ENSOTSG00005025554 eeig1b (ENSOTSG00005025616) dpm2 (ENSOTSG00005025871) PIP5KL1 (ENSOTSG00005025873) ENSOTSG00005025876 ##22 lrrc8aa (ENSOTSG00005025878) uck1 (ENSOTSG00005025879) rapgef1b (ENSOTSG00005025896) NTNG2 (ENSOTSG00005027999) dolpp1 (ENSOTSG00005028004) ST6GALNAC6 (ENSOTSG00005028018) RPL7A (ENSOTSG00005028024) med22 (ENSOTSG00005028036) usp20 (ENSOTSG00005028052) ptges (ENSOTSG00005029976) ENSOTSG00005029978 ENSOTSG00005029980 ENSOTSG00005029991 ENSOTSG00005030007 CNNM4 (ENSOTSG00005030008) Coho salmon MODERN SPECIES 21 ZER1 (ENSOKIG00005048787) TBC1D13 (ENSOKIG00005048837) RALGDS (ENSOKIG00005048933) SMARCB1 (ENSOKIG00005031522) MMP11 (ENSOKIG00005031896) setb (ENSOKIG00005032028) SPTAN1 (ENSOKIG00005032298) ODF2 (ENSOKIG00005035802) ENSOKIG00005035921 ZDHHC12 (ENSOKIG00005035930) ENSOKIG00005035959 ENSOKIG00005035986 eeig1b (ENSOKIG00005036237) dpm2 (ENSOKIG00005036406) PIP5KL1 (ENSOKIG00005036456) ENSOKIG00005036460 ##22 lrrc8aa (ENSOKIG00005036478) uck1 (ENSOKIG00005036493) rapgef1b (ENSOKIG00005036604) NTNG2 (ENSOKIG00005037657) ENSOKIG00005037714 dolpp1 (ENSOKIG00005037762) ST6GALNAC6 (ENSOKIG00005037820) ENSOKIG00005037857 RPL7A (ENSOKIG00005037873) USP20 (ENSOKIG00005038045) PTGES (ENSOKIG00005040761) ENSOKIG00005040787 ENSOKIG00005040885 ENSOKIG00005041063 CNNM4 (ENSOKIG00005041091) Rainbow trout MODERN SPECIES 364 ENSOMYG00000025720 ENSOMYG00000025861 ENSOMYG00000025913 ENSOMYG00000043272 setb (ENSOMYG00000025957) ENSOMYG00000026738 ENSOMYG00000029607 ENSOMYG00000052811 ENSOMYG00000073922 slc25a25b (ENSOMYG00000029907) NAIF1 (ENSOMYG00000030117) eeig1b (ENSOMYG00000030131) DPM2 (ENSOMYG00000068796) PIP5KL1 (ENSOMYG00000000213) ENSOMYG00000037775 ##22 lrrc8aa (ENSOMYG00000037813) uck1 (ENSOMYG00000037846) rapgef1b (ENSOMYG00000038298) ENSOMYG00000040864 dolpp1 (ENSOMYG00000040886) ENSOMYG00000040922 ENSOMYG00000040937 med22 (ENSOMYG00000042206) usp20 (ENSOMYG00000041064) ptges (ENSOMYG00000042212) ENSOMYG00000042217 ENSOMYG00000042265 ENSOMYG00000042456 ENSOMYG00000042460 ENSOMYG00000034126 Salmo ANCESTRAL SPECIES 1 ENSGT00940000158674.g ENSGT00940000153181.m.b ENSGT00440000038585.c.d ENSGT00940000156340.a.d.d ENSGT00940000161345.d ENSGT00940000153877.a.a.b.c ENSGT00940000156662.d.h.b ENSGT00530000063497.a.a.c ENSGT00940000166931.e ENSGT00940000156902.b ENSGT00940000159428.f.b ENSGT00450000040324.b.l ENSGT00940000156811.b.c.a ENSGT00390000001098.j ENSGT00940000158633.a.d ENSGT00950000183190.a.b.b.c.b ##22 ENSGT00390000005742.x.b ENSGT00940000154043.A.j.b.f ENSGT01020000230412.A.c.a.c ENSGT00940000156235.c.a.c ENSGT00940000153601.a.a.e.b.a.e.a ENSGT00390000013112.d ENSGT00390000008565.a.p ENSGT00940000160114.g ENSGT00940000153294.e ENSGT00390000004339.r ENSGT00940000158829.e ENSGT00390000011980.b.b.d ENSGT00940000159362.d Atlantic salmon MODERN SPECIES 2 ENSSSAG00000106260 ENSSSAG00000040195 ENSSSAG00000041629 ENSSSAG00000120691 ENSSSAG00000041813 ENSSSAG00000042291 ENSSSAG00000042444 set (ENSSSAG00000068418) ENSSSAG00000088806 ENSSSAG00000042832 ENSSSAG00000067576 ENSSSAG00000067604 slc25a25b (ENSSSAG00000048730) eeig1b (ENSSSAG00000069579) ENSSSAG00000069616 ENSSSAG00000069630 ##22 ENSSSAG00000092176 lrrc8aa (ENSSSAG00000069635) uck1 (ENSSSAG00000111451) rapgef1b (ENSSSAG00000070639) ENSSSAG00000070855 dolpp1 (ENSSSAG00000063525) miga2 (ENSSSAG00000070899) ENSSSAG00000104107 ENSSSAG00000090175 ENSSSAG00000070956 RL7A (ENSSSAG00000070973) ENSSSAG00000119799 ENSSSAG00000104310 ENSSSAG00000120087 ENSSSAG00000102551 River trout MODERN SPECIES 3 RALGDS (ENSSTUG00000047655) smarcb1b (ENSSTUG00000047596) ENSSTUG00000047580 chchd10 (ENSSTUG00000047578) setb (ENSSTUG00000047566) sptan1 (ENSSTUG00000046139) ENSSTUG00000046017 ODF2 (ENSSTUG00000045992) ddt (ENSSTUG00000045971) zdhhc12b (ENSSTUG00000045963) ENSSTUG00000045381 naif1 (ENSSTUG00000045347) eeig1b (ENSSTUG00000045254) dpm2 (ENSSTUG00000045250) PIP5KL1 (ENSSTUG00000045238) ENSSTUG00000045219 ##22 lrrc8aa (ENSSTUG00000045205) uck1 (ENSSTUG00000045163) rapgef1b (ENSSTUG00000043677) ENSSTUG00000043604 NTNG2 (ENSSTUG00000043593) dolpp1 (ENSSTUG00000043547) ST6GALNAC6 (ENSSTUG00000043508) RPL7A (ENSSTUG00000043423) med22 (ENSSTUG00000043408) ENSSTUG00000043398 usp20 (ENSSTUG00000039303) ptges (ENSSTUG00000039212) garnl3 (ENSSTUG00000038923) ENSSTUG00000038891 ENSSTUG00000038870 Huchen MODERN SPECIES 250 setb (ENSHHUG00000031194) sptan1 (ENSHHUG00000030605) ODF2 (ENSHHUG00000030526) ENSHHUG00000030514 ddt (ENSHHUG00000030499) zdhhc12b (ENSHHUG00000030495) ENSHHUG00000030486 slc25a25b (ENSHHUG00000029810) naif1 (ENSHHUG00000029795) eeig1b (ENSHHUG00000029780) dpm2 (ENSHHUG00000029777) PIP5KL1 (ENSHHUG00000029739) ENSHHUG00000029733 ##22 ENSHHUG00000029721 ENSHHUG00000029709 lrrc8aa (ENSHHUG00000029704) uck1 (ENSHHUG00000029696) rapgef1b (ENSHHUG00000029665) NTNG2 (ENSHHUG00000029560) Salmoninae ANCESTRAL SPECIES 78 ENSGT00940000153877.a.a.b.c ENSGT00940000156662.d.h.b ENSGT00530000063497.a.a.c ENSGT00940000166931.e ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.d ENSGT00940000156811.b.c.b ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00940000165164.f ENSGT00950000183190.a.b.b.d ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e ENSGT00390000008220 ENSGT00940000154856.B.d.a.a ENSGT01020000230412.A.c.a.d ENSGT00940000156235.c.a.d ENSGT00940000153601.a.a.e.b.a.f.a ENSGT00940000160918 ENSGT00390000013112.c ENSGT00390000008565.a.o ENSGT00940000157958 ENSGT00940000160114.h ENSGT00390000016537 Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00940000165164.f ENSGT00950000183190.a.b.b.c.a ##22 ENSGT00950000183190.a.b.b.d ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e ENSGT00390000008220 ENSGT00940000154856.B.d.a.a ENSGT01020000230412.A.c.a.d ENSGT00940000156235.c.a.d ENSGT00940000153601.a.a.e.b.a.e.b ENSGT00940000160918 ENSGT00390000013112.c ENSGT00390000008565.a.o ENSGT00940000157958 ENSGT00940000160114.h ENSGT00390000016537 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183190.a.b.b.d ##22 Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT00940000178900 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00980000199742 ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00950000183190.a.b.b.d ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e ENSGT00390000008220.h ENSGT01020000230412.A.c.a.d ENSGT00940000156235.c.a.d ENSGT00940000153601.a.a.e.b.a.e.b ENSGT00940000160918 ENSGT00390000013112.c ENSGT00390000008565.a.o ENSGT00940000157958 ENSGT00940000160114.h ENSGT00390000016537 ENSGT00940000158797 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 15 ODF2 (ENSOKIG00005034144) sptan1 (ENSOKIG00005032233) dync2i2 (ENSOKIG00005032060) setb (ENSOKIG00005031970) uap1l1 (ENSOKIG00005031899) ENSOKIG00005031476 SLC25A25 (ENSOKIG00005030466) naif1 (ENSOKIG00005030315) eeig1b (ENSOKIG00005030005) ENSOKIG00005029980 ENSOKIG00005029971 dpm2 (ENSOKIG00005029944) PIP5KL1 (ENSOKIG00005029891) sh3glb2b (ENSOKIG00005029183) ENSOKIG00005029120 cdk5rap2 (ENSOKIG00005029031) ##22 ENSOKIG00005029015 ##22 NUP188 (ENSOKIG00005028144) dolk (ENSOKIG00005028101) phyhd1 (ENSOKIG00005027983) LRRC8A (ENSOKIG00005027965) ENSOKIG00005027945 ENSOKIG00005027862 dnlz (ENSOKIG00005027813) ENSOKIG00005027804 dnlz (ENSOKIG00005027790) uck1 (ENSOKIG00005027716) ENSOKIG00005027700 rapgef1b (ENSOKIG00005026261) NTNG2 (ENSOKIG00005026177) SETX (ENSOKIG00005026141) Coho salmon MODERN SPECIES 15 sptan1 (ENSOKIG00005032233) dync2i2 (ENSOKIG00005032060) setb (ENSOKIG00005031970) uap1l1 (ENSOKIG00005031899) ENSOKIG00005031476 SLC25A25 (ENSOKIG00005030466) naif1 (ENSOKIG00005030315) eeig1b (ENSOKIG00005030005) ENSOKIG00005029980 ENSOKIG00005029971 dpm2 (ENSOKIG00005029944) PIP5KL1 (ENSOKIG00005029891) sh3glb2b (ENSOKIG00005029183) ENSOKIG00005029120 cdk5rap2 (ENSOKIG00005029031) ##22 ENSOKIG00005029015 ##22 NUP188 (ENSOKIG00005028144) dolk (ENSOKIG00005028101) phyhd1 (ENSOKIG00005027983) LRRC8A (ENSOKIG00005027965) ENSOKIG00005027945 ENSOKIG00005027862 dnlz (ENSOKIG00005027813) ENSOKIG00005027804 dnlz (ENSOKIG00005027790) uck1 (ENSOKIG00005027716) ENSOKIG00005027700 rapgef1b (ENSOKIG00005026261) NTNG2 (ENSOKIG00005026177) SETX (ENSOKIG00005026141) dolpp1 (ENSOKIG00005026085) Chinook salmon MODERN SPECIES 12 wdr41 (ENSOTSG00005035379) otpa (ENSOTSG00005035378) tbca (ENSOTSG00005035356) ENSOTSG00005035353 DMGDH (ENSOTSG00005033116) bhmt (ENSOTSG00005032687) JMY (ENSOTSG00005032667) HOMER1 (ENSOTSG00005032662) DTWD2 (ENSOTSG00005032660) tia1 (ENSOTSG00005032437) C2orf42 (ENSOTSG00005032435) AP3B1 (ENSOTSG00005024796) scamp1 (ENSOTSG00005024781) lhfpl2a (ENSOTSG00005024779) ZNF703 (ENSOTSG00005024776) cdk5rap2 (ENSOTSG00005024766) ##22 NUP188 (ENSOTSG00005024399) dolk (ENSOTSG00005024398) phyhd1 (ENSOTSG00005024394) lrrc8aa (ENSOTSG00005024391) dnlz (ENSOTSG00005024389) uck1 (ENSOTSG00005024383) rapgef1b (ENSOTSG00005024382) ENSOTSG00005024380 ENSOTSG00005024378 ENSOTSG00005024377 tcf7l1a (ENSOTSG00005024374) COX5B (ENSOTSG00005024371) npy8ar (ENSOTSG00005024369) actr1b (ENSOTSG00005024016) marchf5l (ENSOTSG00005024011) Salmo ANCESTRAL SPECIES ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00940000165164.f ENSGT00950000183190.a.b.b.c.a ##22 ENSGT00950000183190.a.b.b.d ##22 ENSGT00390000005742.x.a ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e ENSGT00390000008220 ENSGT00940000154856.B.d.a.a ENSGT01020000230412.A.c.a.d ENSGT00940000156235.c.a.d ENSGT00940000153601.a.a.e.b.a.e.b ENSGT00940000160918 ENSGT00390000013112.c ENSGT00390000008565.a.o ENSGT00940000157958 ENSGT00940000160114.h ENSGT00390000016537 River trout MODERN SPECIES 15 setb (ENSSTUG00000007186) uap1l1 (ENSSTUG00000007122) ENSSTUG00000007108 ENSSTUG00000006984 slc25a25b (ENSSTUG00000006529) naif1 (ENSSTUG00000006494) ENSSTUG00000006491 eeig1b (ENSSTUG00000006445) ENSSTUG00000006420 dpm2 (ENSSTUG00000006398) PIP5KL1 (ENSSTUG00000006343) sh3glb2b (ENSSTUG00000005677) ENSSTUG00000005563 ENSSTUG00000005556 ENSSTUG00000005539 cdk5rap2 (ENSSTUG00000005443) ##22 NUP188 (ENSSTUG00000004750) dolk (ENSSTUG00000004637) phyhd1 (ENSSTUG00000004611) lrrc8aa (ENSSTUG00000004594) dnlz (ENSSTUG00000004588) ENSSTUG00000004527 ENSSTUG00000004486 ENSSTUG00000004343 uck1 (ENSSTUG00000004262) rapgef1b (ENSSTUG00000003847) ENSSTUG00000002976 NTNG2 (ENSSTUG00000049003) SETX (ENSSTUG00000048979) dolpp1 (ENSSTUG00000048954) miga2 (ENSSTUG00000048942) Huchen MODERN SPECIES 850 eeig1b (ENSHHUG00000051138) ENSHHUG00000051132 dpm2 (ENSHHUG00000051130) PIP5KL1 (ENSHHUG00000051125) sh3glb2b (ENSHHUG00000051122) ENSHHUG00000051121 cdk5rap2 (ENSHHUG00000051107) ##22 NUP188 (ENSHHUG00000051101) dolk (ENSHHUG00000051098) phyhd1 (ENSHHUG00000051076) lrrc8aa (ENSHHUG00000051073) dnlz (ENSHHUG00000051067) ENSHHUG00000051065 uck1 (ENSHHUG00000051059) rapgef1b (ENSHHUG00000050961) Acanthomorphata ANCESTRAL SPECIES 15 ENSGT00940000164047.c.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Cod MODERN SPECIES 10 LOXHD1 (ENSGMOG00000017024) ST8SIA5 (ENSGMOG00000017008) rpl37 (ENSGMOG00000016997) ENSGMOG00000016986 ENSGMOG00000027855 ENSGMOG00000015325 ENSGMOG00000035073 ENSGMOG00000016912 ENSGMOG00000016873 ENSGMOG00000022832 ENSGMOG00000016593 #18 ENSGMOG00000029706 ENSGMOG00000016735 ENSGMOG00000025145 #19 ENSGMOG00000034109 cdk5rap2 (ENSGMOG00000016387) ##22 ENSGMOG00000022660 ##22 ENSGMOG00000027526 NUP188 (ENSGMOG00000016308) ENSGMOG00000035306 dolk (ENSGMOG00000020327) phyhd1 (ENSGMOG00000016285) lrrc8aa (ENSGMOG00000016278) uck1 (ENSGMOG00000016253) rapgef1b (ENSGMOG00000016178) ENSGMOG00000016162 dolpp1 (ENSGMOG00000016141) miga2 (ENSGMOG00000016113) st6galnac4 (ENSGMOG00000016107) ENSGMOG00000016091 spout1 (ENSGMOG00000015985) Euacanthomorphacea ANCESTRAL SPECIES 12 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Pinecone sodierfish MODERN SPECIES 3 pdcl (ENSMMDG00005001207) rpl28 (ENSMMDG00005001219) ENSMMDG00005001229 SEC16A (ENSMMDG00005001257) ENSMMDG00005001329 ENSMMDG00005001334 ENSMMDG00005001340 ENSMMDG00005001348 ENSMMDG00005001356 ENSMMDG00005001360 ENSMMDG00005001363 KCNT1 (ENSMMDG00005001404) psmd5 (ENSMMDG00005001982) #18 B3GALT9 (ENSMMDG00005002005) #19 ENSMMDG00005002012 cdk5rap2 (ENSMMDG00005002020) ##22 TRAF2 (ENSMMDG00005002028) ENSMMDG00005002105 ENSMMDG00005006291 pik3r1 (ENSMMDG00005006298) MAST4 (ENSMMDG00005006491) srek1 (ENSMMDG00005006820) ENSMMDG00005006822 erbin (ENSMMDG00005006885) nln (ENSMMDG00005012294) sgtb (ENSMMDG00005015991) trappc13 (ENSMMDG00005015997) tnfrsfa (ENSMMDG00005016000) unc5da (ENSMMDG00005016009) ENSMMDG00005016015 aqp3b (ENSMMDG00005016016) Percomorphaceae ANCESTRAL SPECIES 16 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Tiger tail seahorse MODERN SPECIES 314 RIMBP2 (ENSHCOG00000014278) noc4l (ENSHCOG00000014284) pus1 (ENSHCOG00000014288) ENSHCOG00000014330 BCR (ENSHCOG00000014376) ADORA2A (ENSHCOG00000014390) snrpd3 (ENSHCOG00000014396) ENSHCOG00000014483 ENSHCOG00000014497 ENSHCOG00000014506 ENSHCOG00000014581 ENSHCOG00000014592 ENSHCOG00000014616 si:dkey-261m9.17 (ENSHCOG00000014624) ENSHCOG00000014688 cdk5rap2 (ENSHCOG00000014731) ##22 Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Ovalentaria ANCESTRAL SPECIES 16 ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000163466.g.a ENSGT00940000167622 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000167622 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Pomacentridae ANCESTRAL SPECIES 12 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Pomacentridae_A ANCESTRAL SPECIES 10 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Amphiprion ANCESTRAL SPECIES 5 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Clown anemonefish MODERN SPECIES 1020 RNF165 (ENSAOCG00000019627) LOXHD1 (ENSAOCG00000019719) st8sia5 (ENSAOCG00000019779) rpl37 (ENSAOCG00000019804) PTGS1 (ENSAOCG00000019827) pdcl (ENSAOCG00000019840) rpl28 (ENSAOCG00000019874) ENSAOCG00000019884 ENSAOCG00000019910 notch1a (ENSAOCG00000020039) camsap1a (ENSAOCG00000020074) KCNT1 (ENSAOCG00000020284) psmd5 (ENSAOCG00000020321) #18 B3GALT9 (ENSAOCG00000002752) #19 ENSAOCG00000020350 cdk5rap2 (ENSAOCG00000020578) ##22 kdm4c (ENSAOCG00000020617) ecpas (ENSAOCG00000020767) ENSAOCG00000002160 smc2 (ENSAOCG00000020928) exoc1l (ENSAOCG00000020946) clockb (ENSAOCG00000020997) kitb (ENSAOCG00000021020) fip1l1b (ENSAOCG00000021043) Orange clownfish MODERN SPECIES 7 RNF165 (ENSAPEG00000020663) LOXHD1 (ENSAPEG00000020703) st8sia5 (ENSAPEG00000020803) rpl37 (ENSAPEG00000020900) PTGS1 (ENSAPEG00000020917) pdcl (ENSAPEG00000020955) rpl28 (ENSAPEG00000020972) ENSAPEG00000020987 ENSAPEG00000021030 notch1a (ENSAPEG00000021342) camsap1a (ENSAPEG00000021431) KCNT1 (ENSAPEG00000021479) psmd5 (ENSAPEG00000021521) #18 B3GALT9 (ENSAPEG00000021536) #19 ENSAPEG00000021550 cdk5rap2 (ENSAPEG00000021595) ##22 NUP188 (ENSAPEG00000021846) dolk (ENSAPEG00000021930) phyhd1 (ENSAPEG00000021937) lrrc8aa (ENSAPEG00000021979) dnlz (ENSAPEG00000021985) uck1 (ENSAPEG00000021995) rapgef1b (ENSAPEG00000022056) NTNG2 (ENSAPEG00000022268) dolpp1 (ENSAPEG00000022294) miga2 (ENSAPEG00000022316) st6galnac4 (ENSAPEG00000022366) ST6GALNAC6 (ENSAPEG00000022379) spout1 (ENSAPEG00000022391) kyat1 (ENSAPEG00000022413) surf6 (ENSAPEG00000022442) Bicolor damselfish MODERN SPECIES 1769 KCNT1 (ENSSPAG00000016469) psmd5 (ENSSPAG00000016500) #18 B3GALT9 (ENSSPAG00000016514) #19 ENSSPAG00000016540 cdk5rap2 (ENSSPAG00000016557) ##22 Cichlidae ANCESTRAL SPECIES 10 ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000180069 ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000167622 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000180069 ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000167622 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000180069 ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000167622 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Haplochromini ANCESTRAL SPECIES ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000180069 ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000167622 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Burton s mouthbrooder MODERN SPECIES 287 RNF165 (ENSHBUG00000007084) LOXHD1 (ENSHBUG00000007211) st8sia5 (ENSHBUG00000007237) rpl37 (ENSHBUG00000007271) ptgs1 (ENSHBUG00000007346) pdcl (ENSHBUG00000000181) rpl28 (ENSHBUG00000007390) ENSHBUG00000000185 ENSHBUG00000007455 notch1a (ENSHBUG00000007562) camsap1a (ENSHBUG00000007594) KCNT1 (ENSHBUG00000007657) psmd5 (ENSHBUG00000007664) #18 B3GALT9 (ENSHBUG00000007682) #19 ENSHBUG00000007803 cdk5rap2 (ENSHBUG00000008049) ##22 NUP188 (ENSHBUG00000008224) dolk (ENSHBUG00000008248) phyhd1 (ENSHBUG00000008290) lrrc8aa (ENSHBUG00000008312) dnlz (ENSHBUG00000008344) uck1 (ENSHBUG00000008388) rapgef1b (ENSHBUG00000008457) NTNG2 (ENSHBUG00000008508) miga2 (ENSHBUG00000008642) dolpp1 (ENSHBUG00000008718) st6galnac4 (ENSHBUG00000008676) ST6GALNAC6 (ENSHBUG00000008728) spout1 (ENSHBUG00000008743) kyat1 (ENSHBUG00000008749) surf6 (ENSHBUG00000008764) Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000180069 ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000167622.d ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000167622.d ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Zebra mbuna MODERN SPECIES 1110 RNF165 (ENSMZEG00005001861) LOXHD1 (ENSMZEG00005001886) st8sia5 (ENSMZEG00005002037) rpl37 (ENSMZEG00005002074) ptgs1 (ENSMZEG00005002096) pdcl (ENSMZEG00005002137) rpl28 (ENSMZEG00005002151) ENSMZEG00005002172 notch1a (ENSMZEG00005002211) camsap1a (ENSMZEG00005002300) KCNT1 (ENSMZEG00005002333) psmd5 (ENSMZEG00005002391) #18 B3GALT9 (ENSMZEG00005002398) #19 ENSMZEG00005002418 ENSMZEG00005002525 cdk5rap2 (ENSMZEG00005002555) ##22 NUP188 (ENSMZEG00005002658) dolk (ENSMZEG00005002745) phyhd1 (ENSMZEG00005002750) lrrc8aa (ENSMZEG00005002797) dnlz (ENSMZEG00005002808) uck1 (ENSMZEG00005002829) rapgef1b (ENSMZEG00005002863) NTNG2 (ENSMZEG00005002974) dolpp1 (ENSMZEG00005003007) miga2 (ENSMZEG00005003042) st6galnac4 (ENSMZEG00005003097) ST6GALNAC6 (ENSMZEG00005003126) spout1 (ENSMZEG00005003159) kyat1 (ENSMZEG00005003170) surf6 (ENSMZEG00005003188) Eastern happy MODERN SPECIES 19 st8sia5 (ENSACLG00000027929) rpl37 (ENSACLG00000027921) ptgs1 (ENSACLG00000027920) pdcl (ENSACLG00000027918) rpl28 (ENSACLG00000027917) ENSACLG00000027916 ENSACLG00000027914 notch1a (ENSACLG00000027910) camsap1a (ENSACLG00000027907) ENSACLG00000027906 KCNT1 (ENSACLG00000027904) psmd5 (ENSACLG00000027903) #18 B3GALT9 (ENSACLG00000027902) #19 ENSACLG00000027895 ENSACLG00000027892 cdk5rap2 (ENSACLG00000027883) ##22 NUP188 (ENSACLG00000027877) dolk (ENSACLG00000027875) phyhd1 (ENSACLG00000027872) lrrc8aa (ENSACLG00000027871) dnlz (ENSACLG00000027870) uck1 (ENSACLG00000027867) rapgef1b (ENSACLG00000027860) NTNG2 (ENSACLG00000027854) dolpp1 (ENSACLG00000027849) miga2 (ENSACLG00000027841) st6galnac4 (ENSACLG00000027840) ST6GALNAC6 (ENSACLG00000027838) ENSACLG00000027834 spout1 (ENSACLG00000027828) kyat1 (ENSACLG00000027823) P. nyererei MODERN SPECIES 297 rpl37 (ENSPNYG00000004836) ptgs1 (ENSPNYG00000004794) pdcl (ENSPNYG00000004774) rpl28 (ENSPNYG00000004757) ENSPNYG00000004740 ENSPNYG00000004590 notch1a (ENSPNYG00000004505) ENSPNYG00000004495 ENSPNYG00000004482 ENSPNYG00000004470 KCNT1 (ENSPNYG00000004382) psmd5 (ENSPNYG00000004358) #18 B3GALT9 (ENSPNYG00000004354) #19 ENSPNYG00000004339 ENSPNYG00000004289 ENSPNYG00000004106 ##22 NUP188 (ENSPNYG00000003922) dolk (ENSPNYG00000003907) phyhd1 (ENSPNYG00000003882) lrrc8aa (ENSPNYG00000003865) dnlz (ENSPNYG00000003831) uck1 (ENSPNYG00000003788) rapgef1b (ENSPNYG00000003665) NTNG2 (ENSPNYG00000003616) dolpp1 (ENSPNYG00000003578) miga2 (ENSPNYG00000003519) st6galnac4 (ENSPNYG00000003496) ST6GALNAC6 (ENSPNYG00000003481) spout1 (ENSPNYG00000003463) kyat1 (ENSPNYG00000003450) surf6 (ENSPNYG00000003445) Lyretail cichlid MODERN SPECIES 336 rpl37 (ENSNBRG00000006627) ptgs1 (ENSNBRG00000006683) pdcl (ENSNBRG00000006719) rpl28 (ENSNBRG00000006729) ENSNBRG00000006752 ENSNBRG00000006772 notch1a (ENSNBRG00000006798) ENSNBRG00000006872 ENSNBRG00000006878 ENSNBRG00000006885 KCNT1 (ENSNBRG00000006901) ENSNBRG00000006956 psmd5 (ENSNBRG00000006970) #18 B3GALT9 (ENSNBRG00000006983) #19 ENSNBRG00000007008 cdk5rap2 (ENSNBRG00000007141) ##22 NUP188 (ENSNBRG00000007294) dolk (ENSNBRG00000007387) phyhd1 (ENSNBRG00000007401) lrrc8aa (ENSNBRG00000007447) dnlz (ENSNBRG00000007456) uck1 (ENSNBRG00000007467) rapgef1b (ENSNBRG00000007494) NTNG2 (ENSNBRG00000007569) dolpp1 (ENSNBRG00000007607) miga2 (ENSNBRG00000007646) st6galnac4 (ENSNBRG00000007687) ST6GALNAC6 (ENSNBRG00000007711) spout1 (ENSNBRG00000007733) kyat1 (ENSNBRG00000007769) surf6 (ENSNBRG00000007805) Nile tilapia MODERN SPECIES 19 LOXHD1 (ENSONIG00000007521) st8sia5 (ENSONIG00000007511) rpl37 (ENSONIG00000007508) ptgs1 (ENSONIG00000007497) pdcl (ENSONIG00000028580) rpl28 (ENSONIG00000007486) ENSONIG00000043037 ENSONIG00000007476 notch1a (ENSONIG00000007454) camsap1a (ENSONIG00000007450) KCNT1 (ENSONIG00000007444) psmd5 (ENSONIG00000007437) #18 B3GALT9 (ENSONIG00000007435) #19 ENSONIG00000007416 ENSONIG00000028088 ENSONIG00000007403 ##22 NUP188 (ENSONIG00000007388) dolk (ENSONIG00000007387) phyhd1 (ENSONIG00000007384) lrrc8aa (ENSONIG00000007383) dnlz (ENSONIG00000007380) uck1 (ENSONIG00000028104) rapgef1b (ENSONIG00000007374) NTNG2 (ENSONIG00000007373) dolpp1 (ENSONIG00000007370) miga2 (ENSONIG00000007365) st6galnac4 (ENSONIG00000043090) ST6GALNAC6 (ENSONIG00000039951) ENSONIG00000040717 spout1 (ENSONIG00000011299) kyat1 (ENSONIG00000011295) Midas cichlid MODERN SPECIES 49 ENSACIG00000015949 ENSACIG00000015944 ENSACIG00000015934 ENSACIG00000015922 KCNT1 (ENSACIG00000015879) psmd5 (ENSACIG00000015802) #18 B3GALT9 (ENSACIG00000015792) #19 ENSACIG00000015778 ENSACIG00000015759 ##22 NUP188 (ENSACIG00000015653) dolk (ENSACIG00000015640) phyhd1 (ENSACIG00000015609) lrrc8aa (ENSACIG00000015591) dnlz (ENSACIG00000015579) uck1 (ENSACIG00000015555) rapgef1b (ENSACIG00000015498) NTNG2 (ENSACIG00000015470) dolpp1 (ENSACIG00000015452) idh1 (ENSACIG00000015438) Atherinomorphae ANCESTRAL SPECIES 17 ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000163466.g.a ENSGT00940000167622.a ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Oryzias ANCESTRAL SPECIES 9 ENSGT00390000018729.a.f ENSGT00940000155227.a ENSGT00390000013415.b ENSGT00940000170274 ENSGT00940000155770.b.b ENSGT00940000154422.d ENSGT00940000161347.a.b ENSGT00940000161347.a.a ENSGT00940000153434.c.b ENSGT00940000155181.c.b ENSGT00510000047171.y ENSGT00940000157646 ENSGT00390000007153.a.a.b ENSGT00940000167622.a ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Oryzias_b ANCESTRAL SPECIES 4 ENSGT00390000018729.a.f ENSGT00940000155227.a ENSGT00390000013415.b ENSGT00940000170274 ENSGT00940000155770.b.b ENSGT00940000154422.d ENSGT00940000161347.a.b ENSGT00940000161347.a.a ENSGT00940000153434.c.b ENSGT00940000155181.c.b ENSGT00510000047171.y ENSGT00940000157646 ENSGT00390000007153.a.a.b ENSGT00940000167622.a ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Indian medaka MODERN SPECIES 30 thbs4b (ENSOMEG00000010286) zgc:73226 (ENSOMEG00000010315) ENSOMEG00000010335 ENSOMEG00000010389 ENSOMEG00000010420 prune2 (ENSOMEG00000010475) gna14 (ENSOMEG00000010524) ENSOMEG00000010562 hnrpkl (ENSOMEG00000010595) ntrk2b (ENSOMEG00000010657) kcmf1 (ENSOMEG00000010699) ENSOMEG00000010761 GOLPH3 (ENSOMEG00000010805) ENSOMEG00000010815 ENSOMEG00000010842 ENSOMEG00000010863 ##22 NUP188 (ENSOMEG00000010970) ENSOMEG00000011008 dolk (ENSOMEG00000011020) phyhd1 (ENSOMEG00000011039) lrrc8aa (ENSOMEG00000011072) dnlz (ENSOMEG00000011091) uck1 (ENSOMEG00000011122) rapgef1b (ENSOMEG00000011461) ENSOMEG00000011524 NTNG2 (ENSOMEG00000011551) dolpp1 (ENSOMEG00000011573) miga2 (ENSOMEG00000011612) st6galnac4 (ENSOMEG00000011659) ST6GALNAC6 (ENSOMEG00000011708) spout1 (ENSOMEG00000011687) Oryzias_a ANCESTRAL SPECIES 12 ENSGT00390000013415.b ENSGT00940000170274 ENSGT00940000155770.b.b ENSGT00940000176240 ENSGT00940000154422.d ENSGT00940000161347.a.b ENSGT00940000161347.a.a ENSGT00940000153434.c.b ENSGT00940000155181.c.b ENSGT00510000047171.y ENSGT00940000157646 ENSGT00390000007153.a.a.b ENSGT00940000167622.a ENSGT00940000162727.a.b ENSGT01060000249721 ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Chinese medaka MODERN SPECIES 57 zgc:122979 (ENSOSIG00000012466) ENSOSIG00000012473 thbs4b (ENSOSIG00000012713) ENSOSIG00000013884 ENSOSIG00000013892 prune2 (ENSOSIG00000013909) gna14 (ENSOSIG00000013912) ENSOSIG00000013923 hnrpkl (ENSOSIG00000013931) ntrk2b (ENSOSIG00000013970) ntrk2b (ENSOSIG00000013972) kcmf1 (ENSOSIG00000013974) ITGA1 (ENSOSIG00000013984) GOLPH3 (ENSOSIG00000013997) ENSOSIG00000014010 ENSOSIG00000014022 ##22 NUP188 (ENSOSIG00000014054) dolk (ENSOSIG00000014066) ENSOSIG00000014071 rapgef1b (ENSOSIG00000014323) NTNG2 (ENSOSIG00000014324) dolpp1 (ENSOSIG00000014325) miga2 (ENSOSIG00000014330) st6galnac4 (ENSOSIG00000014385) ST6GALNAC6 (ENSOSIG00000014387) spout1 (ENSOSIG00000014391) kyat1 (ENSOSIG00000014393) surf6 (ENSOSIG00000014395) surf1 (ENSOSIG00000014396) ENSOSIG00000014397 RPL7A (ENSOSIG00000014398) Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00940000167622.a ENSGT00940000163466.g.a ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Aplocheiloidei ANCESTRAL SPECIES 5 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000163466.g.a ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Mangrove rivulus MODERN SPECIES 9 zgc:77838 (ENSKMAG00000011757) RNF165 (ENSKMAG00000011715) LOXHD1 (ENSKMAG00000011600) st8sia5 (ENSKMAG00000011551) rpl37 (ENSKMAG00000011480) ptgs1 (ENSKMAG00000011446) pdcl (ENSKMAG00000011429) rpl28 (ENSKMAG00000011412) ENSKMAG00000011397 ENSKMAG00000011196 notch1a (ENSKMAG00000011050) camsap1a (ENSKMAG00000010972) KCNT1 (ENSKMAG00000010894) psmd5 (ENSKMAG00000010852) #18 B3GALT9 (ENSKMAG00000010840) #19 cdk5rap2 (ENSKMAG00000010733) ##22 NUP188 (ENSKMAG00000010645) dolk (ENSKMAG00000010614) phyhd1 (ENSKMAG00000010595) lrrc8aa (ENSKMAG00000010580) ENSKMAG00000010568 uck1 (ENSKMAG00000010542) rapgef1b (ENSKMAG00000010399) NTNG2 (ENSKMAG00000010182) dolpp1 (ENSKMAG00000010112) miga2 (ENSKMAG00000010056) st6galnac4 (ENSKMAG00000010032) ST6GALNAC6 (ENSKMAG00000010011) spout1 (ENSKMAG00000009988) kyat1 (ENSKMAG00000009948) surf6 (ENSKMAG00000009936) Turquoise killifish MODERN SPECIES 1611 RPL37 (ENSNFUG00015003531) PTGS1 (ENSNFUG00015003556) PDCL (ENSNFUG00015003618) rpl28 (ENSNFUG00015003622) ENSNFUG00015003627 SEC16A (ENSNFUG00015003654) notch1a (ENSNFUG00015003776) CAMSAP1 (ENSNFUG00015004050) KCNT1 (ENSNFUG00015004125) psmd5 (ENSNFUG00015004192) #18 ENSNFUG00015004211 ENSNFUG00015004235 ENSNFUG00015004241 B3GALT9 (ENSNFUG00015004245) #19 ENSNFUG00015004252 CDK5RAP2 (ENSNFUG00015004279) ##22 NUP188 (ENSNFUG00015004406) ENSNFUG00015004586 ENSNFUG00015004593 DOLK (ENSNFUG00015004596) ENSNFUG00015004600 LRRC8A (ENSNFUG00015004613) DNLZ (ENSNFUG00015004616) uck1 (ENSNFUG00015004622) rapgef1b (ENSNFUG00015004682) NTNG2 (ENSNFUG00015005138) ENSNFUG00015005148 ENSNFUG00015005152 DOLPP1 (ENSNFUG00015005167) MAP1B (ENSNFUG00015005196) ptcd2 (ENSNFUG00015005220) Cyprinodontoidei ANCESTRAL SPECIES 16 ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00940000167622.a ENSGT00940000163466.g.a ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 NAME_4 ANCESTRAL SPECIES ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Sheepshead minnow MODERN SPECIES 376 camsap1a (ENSCVAG00000014987) KCNT1 (ENSCVAG00000015046) psmd5 (ENSCVAG00000015062) #18 B3GALT9 (ENSCVAG00000015068) #19 ENSCVAG00000015084 cdk5rap2 (ENSCVAG00000015268) ##22 NUP188 (ENSCVAG00000015370) dolk (ENSCVAG00000015379) phyhd1 (ENSCVAG00000015430) lrrc8aa (ENSCVAG00000015435) dnlz (ENSCVAG00000015440) uck1 (ENSCVAG00000015470) rapgef1b (ENSCVAG00000015553) tmem50a (ENSCVAG00000015569) NTNG2 (ENSCVAG00000015576) dolpp1 (ENSCVAG00000015600) miga2 (ENSCVAG00000015667) st6galnac4 (ENSCVAG00000015673) ST6GALNAC6 (ENSCVAG00000015687) spout1 (ENSCVAG00000015713) kyat1 (ENSCVAG00000015721) Mummichog DUPLICATION Mummichog MODERN SPECIES 2246 rpl37 (ENSFHEG00000007607) ptgs1 (ENSFHEG00000007674) pdcl (ENSFHEG00000007709) rpl28 (ENSFHEG00000007732) ENSFHEG00000007741 ENSFHEG00000007759 notch1a (ENSFHEG00000007960) CAMSAP1 (ENSFHEG00000008000) KCNT1 (ENSFHEG00000008076) psmd5 (ENSFHEG00000008091) #18 B3GALT9 (ENSFHEG00000008106) #19 ENSFHEG00000008119 ENSFHEG00000008127 ENSFHEG00000008137 cdk5rap2 (ENSFHEG00000008160) ##22 ENSFHEG00000008188 ##22 NUP188 (ENSFHEG00000008336) dolk (ENSFHEG00000008351) phyhd1 (ENSFHEG00000008411) lrrc8aa (ENSFHEG00000008432) dnlz (ENSFHEG00000008452) uck1 (ENSFHEG00000008472) rapgef1b (ENSFHEG00000008515) ENSFHEG00000008539 MDGA1 (ENSFHEG00000008598) zfand3 (ENSFHEG00000008609) SLC7A9 (ENSFHEG00000008658) nudt19 (ENSFHEG00000008667) RGS9BP (ENSFHEG00000008682) zdhhc7 (ENSFHEG00000008716) ENSFHEG00000008728 Mummichog MODERN SPECIES 2246 st8sia5 (ENSFHEG00000000701) rpl37 (ENSFHEG00000007607) ptgs1 (ENSFHEG00000007674) pdcl (ENSFHEG00000007709) rpl28 (ENSFHEG00000007732) ENSFHEG00000007741 ENSFHEG00000007759 notch1a (ENSFHEG00000007960) CAMSAP1 (ENSFHEG00000008000) KCNT1 (ENSFHEG00000008076) psmd5 (ENSFHEG00000008091) #18 B3GALT9 (ENSFHEG00000008106) #19 ENSFHEG00000008119 ENSFHEG00000008127 ENSFHEG00000008137 cdk5rap2 (ENSFHEG00000008160) ##22 ENSFHEG00000008188 ##22 NUP188 (ENSFHEG00000008336) dolk (ENSFHEG00000008351) phyhd1 (ENSFHEG00000008411) lrrc8aa (ENSFHEG00000008432) dnlz (ENSFHEG00000008452) uck1 (ENSFHEG00000008472) rapgef1b (ENSFHEG00000008515) ENSFHEG00000008539 MDGA1 (ENSFHEG00000008598) zfand3 (ENSFHEG00000008609) SLC7A9 (ENSFHEG00000008658) nudt19 (ENSFHEG00000008667) RGS9BP (ENSFHEG00000008682) zdhhc7 (ENSFHEG00000008716) Poeciliinae ANCESTRAL SPECIES 12 ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00940000167622.a ENSGT00940000163466.g.a ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Platyfish MODERN SPECIES 22 LOXHD1 (ENSXMAG00000005112) st8sia5 (ENSXMAG00000025801) rpl37 (ENSXMAG00000005141) ptgs1 (ENSXMAG00000005144) pdcl (ENSXMAG00000005181) rpl28 (ENSXMAG00000005190) ENSXMAG00000021863 ENSXMAG00000005198 notch1a (ENSXMAG00000005227) camsap1a (ENSXMAG00000005317) KCNT1 (ENSXMAG00000005325) psmd5 (ENSXMAG00000005375) #18 B3GALT9 (ENSXMAG00000005391) #19 ENSXMAG00000028819 ENSXMAG00000026533 cdk5rap2 (ENSXMAG00000005618) ##22 NUP188 (ENSXMAG00000005642) phyhd1 (ENSXMAG00000005677) dolk (ENSXMAG00000019587) lrrc8aa (ENSXMAG00000005685) dnlz (ENSXMAG00000025283) uck1 (ENSXMAG00000005693) rapgef1b (ENSXMAG00000005703) ENSXMAG00000027674 ENSXMAG00000028380 NTNG2 (ENSXMAG00000023300) dolpp1 (ENSXMAG00000005734) miga2 (ENSXMAG00000005746) st6galnac4 (ENSXMAG00000005758) ST6GALNAC6 (ENSXMAG00000023588) spout1 (ENSXMAG00000005778) Poecilia ANCESTRAL SPECIES 12 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Guppy DUPLICATION Guppy MODERN SPECIES 442 notch1a (ENSPREG00000001810) zgc:113176 (ENSPREG00000001775) ENSPREG00000001768 camsap1a (ENSPREG00000001740) KCNT1 (ENSPREG00000001577) psmd5 (ENSPREG00000001511) #18 B3GALT9 (ENSPREG00000001506) #19 ENSPREG00000001403 ENSPREG00000001341 ##22 NUP188 (ENSPREG00000001155) dolk (ENSPREG00000001115) phyhd1 (ENSPREG00000001069) lrrc8aa (ENSPREG00000001041) dnlz (ENSPREG00000001008) uck1 (ENSPREG00000000989) ENSPREG00000000916 ##22 rapgef1b (ENSPREG00000000728) NTNG2 (ENSPREG00000000693) dolpp1 (ENSPREG00000000657) miga2 (ENSPREG00000000650) st6galnac4 (ENSPREG00000000602) ST6GALNAC6 (ENSPREG00000022011) spout1 (ENSPREG00000022001) kyat1 (ENSPREG00000021980) surf6 (ENSPREG00000021969) surf1 (ENSPREG00000021958) ENSPREG00000021953 RPL7A (ENSPREG00000021928) usp20 (ENSPREG00000021897) ptges (ENSPREG00000021881) garnl3 (ENSPREG00000021844) Guppy MODERN SPECIES 442 st8sia5 (ENSPREG00000002126) ENSPREG00000002104 ptgs1 (ENSPREG00000002054) pdcl (ENSPREG00000002038) rpl28 (ENSPREG00000002015) ENSPREG00000001981 ENSPREG00000001938 notch1a (ENSPREG00000001810) zgc:113176 (ENSPREG00000001775) ENSPREG00000001768 camsap1a (ENSPREG00000001740) KCNT1 (ENSPREG00000001577) psmd5 (ENSPREG00000001511) #18 B3GALT9 (ENSPREG00000001506) #19 ENSPREG00000001403 ENSPREG00000001341 ##22 NUP188 (ENSPREG00000001155) dolk (ENSPREG00000001115) phyhd1 (ENSPREG00000001069) lrrc8aa (ENSPREG00000001041) dnlz (ENSPREG00000001008) uck1 (ENSPREG00000000989) ENSPREG00000000916 ##22 rapgef1b (ENSPREG00000000728) NTNG2 (ENSPREG00000000693) dolpp1 (ENSPREG00000000657) miga2 (ENSPREG00000000650) st6galnac4 (ENSPREG00000000602) ST6GALNAC6 (ENSPREG00000022011) spout1 (ENSPREG00000022001) kyat1 (ENSPREG00000021980) NAME_6 ANCESTRAL SPECIES 13 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Amazon molly MODERN SPECIES 532 LOXHD1 (ENSPFOG00000001476) st8sia5 (ENSPFOG00000001809) rpl37 (ENSPFOG00000001911) ptgs1 (ENSPFOG00000001976) pdcl (ENSPFOG00000002177) rpl28 (ENSPFOG00000002206) ENSPFOG00000023453 ENSPFOG00000002239 notch1a (ENSPFOG00000002502) camsap1a (ENSPFOG00000003292) KCNT1 (ENSPFOG00000003473) psmd5 (ENSPFOG00000003886) #18 B3GALT9 (ENSPFOG00000020425) #19 ENSPFOG00000004100 cdk5rap2 (ENSPFOG00000005000) ##22 NUP188 (ENSPFOG00000005437) phyhd1 (ENSPFOG00000024517) dolk (ENSPFOG00000020426) lrrc8aa (ENSPFOG00000006171) dnlz (ENSPFOG00000006199) uck1 (ENSPFOG00000006208) rapgef1b (ENSPFOG00000006320) NTNG2 (ENSPFOG00000006612) dolpp1 (ENSPFOG00000006746) miga2 (ENSPFOG00000006841) st6galnac4 (ENSPFOG00000007136) miga2 (ENSPFOG00000007042) ST6GALNAC6 (ENSPFOG00000007184) spout1 (ENSPFOG00000022119) kyat1 (ENSPFOG00000007267) Sailfin molly MODERN SPECIES 638 camsap1a (ENSPLAG00000013808) KCNT1 (ENSPLAG00000013763) psmd5 (ENSPLAG00000013693) #18 B3GALT9 (ENSPLAG00000013683) #19 ENSPLAG00000013674 cdk5rap2 (ENSPLAG00000013639) ##22 NUP188 (ENSPLAG00000013364) dolk (ENSPLAG00000013269) phyhd1 (ENSPLAG00000013257) lrrc8aa (ENSPLAG00000013224) dnlz (ENSPLAG00000013221) uck1 (ENSPLAG00000013213) rapgef1b (ENSPLAG00000013171) Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Anabantaria ANCESTRAL SPECIES 12 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Zig-zag eel MODERN SPECIES 3 RNF165 (ENSMAMG00000017346) LOXHD1 (ENSMAMG00000017376) ST8SIA5 (ENSMAMG00000017453) rpl37 (ENSMAMG00000025959) ENSMAMG00000017493 ENSMAMG00000017513 ENSMAMG00000017519 ENSMAMG00000017628 ENSMAMG00000017538 ENSMAMG00000017642 ENSMAMG00000017705 ENSMAMG00000017747 ENSMAMG00000017804 #18 ENSMAMG00000017843 #19 ENSMAMG00000027166 cdk5rap2 (ENSMAMG00000017869) ##22 NUP188 (ENSMAMG00000017976) dolk (ENSMAMG00000018058) phyhd1 (ENSMAMG00000018063) lrrc8aa (ENSMAMG00000018072) dnlz (ENSMAMG00000018077) uck1 (ENSMAMG00000018082) rapgef1b (ENSMAMG00000018110) ENSMAMG00000018144 dolpp1 (ENSMAMG00000027851) miga2 (ENSMAMG00000018196) st6galnac4 (ENSMAMG00000018228) ENSMAMG00000018235 spout1 (ENSMAMG00000018243) kyat1 (ENSMAMG00000018263) ENSMAMG00000018269 Anabantoidei ANCESTRAL SPECIES 16 ENSGT00390000016167 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Climbing perch MODERN SPECIES 3 RNF165 (ENSATEG00000014022) ENSATEG00000014014 ENSATEG00000013978 ST8SIA5 (ENSATEG00000028585) rpl37 (ENSATEG00000013933) ENSATEG00000013897 ENSATEG00000013860 ENSATEG00000013839 ENSATEG00000013831 ENSATEG00000013761 ENSATEG00000013629 ENSATEG00000029256 ENSATEG00000013502 ENSATEG00000013483 #18 ENSATEG00000013473 #19 cdk5rap2 (ENSATEG00000013264) ##22 NUP188 (ENSATEG00000013129) dolk (ENSATEG00000013104) phyhd1 (ENSATEG00000013069) lrrc8aa (ENSATEG00000013062) uck1 (ENSATEG00000013052) rapgef1b (ENSATEG00000012889) ENSATEG00000012837 dolpp1 (ENSATEG00000012798) miga2 (ENSATEG00000012727) st6galnac4 (ENSATEG00000012717) ENSATEG00000029342 spout1 (ENSATEG00000029277) kyat1 (ENSATEG00000012650) ENSATEG00000012640 surf1 (ENSATEG00000012573) Siamese fighting fish MODERN SPECIES 3 atp5fa1 (ENSBSLG00000018010) zgc:77838 (ENSBSLG00000017996) RNF165 (ENSBSLG00000017988) st8sia5 (ENSBSLG00000017697) rpl37 (ENSBSLG00000017665) PTGS1 (ENSBSLG00000016014) pdcl (ENSBSLG00000015987) rpl28 (ENSBSLG00000015979) ENSBSLG00000015976 SEC16A (ENSBSLG00000015741) notch1a (ENSBSLG00000012905) camsap1a (ENSBSLG00000012780) KCNT1 (ENSBSLG00000012710) psmd5 (ENSBSLG00000012692) #18 B3GALT9 (ENSBSLG00000012689) #19 ENSBSLG00000012589 ##22 NUP188 (ENSBSLG00000011267) dolk (ENSBSLG00000011240) phyhd1 (ENSBSLG00000011217) lrrc8aa (ENSBSLG00000011213) dnlz (ENSBSLG00000011211) gng10 (ENSBSLG00000011202) btc (ENSBSLG00000011185) RXFP3 (ENSBSLG00000011179) slc45a2 (ENSBSLG00000011169) amacr (ENSBSLG00000011156) ENSBSLG00000011118 NUP54 (ENSBSLG00000011087) PPEF2 (ENSBSLG00000011030) ENSBSLG00000010891 ENSBSLG00000010794 Carangaria ANCESTRAL SPECIES 17 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00390000016167 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Turbot MODERN SPECIES 7 C18orf25 (ENSSMAG00000008557) RNF165 (ENSSMAG00000032415) LOXHD1 (ENSSMAG00000008589) ST8SIA5 (ENSSMAG00000008655) rpl37 (ENSSMAG00000008688) ENSSMAG00000008708 ENSSMAG00000008737 ENSSMAG00000008756 ENSSMAG00000008778 ENSSMAG00000008794 ENSSMAG00000008857 ENSSMAG00000008955 ENSSMAG00000008991 ENSSMAG00000009172 #18 ENSSMAG00000028675 #19 ENSSMAG00000009277 ##22 NUP188 (ENSSMAG00000009352) dolk (ENSSMAG00000009434) phyhd1 (ENSSMAG00000009440) lrrc8aa (ENSSMAG00000009462) dnlz (ENSSMAG00000032198) uck1 (ENSSMAG00000009546) rapgef1b (ENSSMAG00000009579) ENSSMAG00000009623 dolpp1 (ENSSMAG00000009644) miga2 (ENSSMAG00000009702) st6galnac4 (ENSSMAG00000009763) ENSSMAG00000009772 spout1 (ENSSMAG00000009786) kyat1 (ENSSMAG00000009812) ENSSMAG00000025410 Carangaria_A ANCESTRAL SPECIES 18 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Barramundi perch MODERN SPECIES 101 RNF165 (ENSLCAG00010002367) LOXHD1 (ENSLCAG00010002359) st8sia5 (ENSLCAG00010002346) rpl37 (ENSLCAG00010002333) ptgs1 (ENSLCAG00010002329) pdcl (ENSLCAG00010002322) rpl28 (ENSLCAG00010002317) ENSLCAG00010002313 ENSLCAG00010002099 notch1a (ENSLCAG00010001977) camsap1a (ENSLCAG00010001967) KCNT1 (ENSLCAG00010001943) psmd5 (ENSLCAG00010001921) #18 B3GALT9 (ENSLCAG00010001917) #19 ENSLCAG00010001866 ENSLCAG00010001771 ##22 NUP188 (ENSLCAG00010001675) dolk (ENSLCAG00010001654) phyhd1 (ENSLCAG00010001651) lrrc8aa (ENSLCAG00010001647) dnlz (ENSLCAG00010001642) uck1 (ENSLCAG00010001644) rapgef1b (ENSLCAG00010001568) NTNG2 (ENSLCAG00010001551) dolpp1 (ENSLCAG00010001548) miga2 (ENSLCAG00010001544) st6galnac4 (ENSLCAG00010001542) ST6GALNAC6 (ENSLCAG00010001537) spout1 (ENSLCAG00010001514) kyat1 (ENSLCAG00010001500) kyat1 (ENSLCAG00010001488) Seriola ANCESTRAL SPECIES 150 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000180976 ENSGT00940000167622 ENSGT00940000163466 ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 Greater amberjack MODERN SPECIES 166 rpl28 (ENSSDUG00000015127) ENSSDUG00000015116 SEC16A (ENSSDUG00000015034) notch1a (ENSSDUG00000014956) camsap1a (ENSSDUG00000014856) KCNT1 (ENSSDUG00000014778) B3GALT9 (ENSSDUG00000014767) #19 psmd5 (ENSSDUG00000014740) #18 ENSSDUG00000014718 ENSSDUG00000014696 cdk5rap2 (ENSSDUG00000014578) ##22 NUP188 (ENSSDUG00000014489) ENSSDUG00000014459 dolk (ENSSDUG00000014448) phyhd1 (ENSSDUG00000014312) dnlz (ENSSDUG00000014253) Yellowtail amberjack MODERN SPECIES 2544 rpl28 (ENSSLDG00000000414) ENSSLDG00000000425 ENSSLDG00000000447 notch1a (ENSSLDG00000000609) camsap1a (ENSSLDG00000000765) KCNT1 (ENSSLDG00000000910) psmd5 (ENSSLDG00000001037) #18 B3GALT9 (ENSSLDG00000001089) #19 ENSSLDG00000001127 ENSSLDG00000001143 ENSSLDG00000001196 ##22 NUP188 (ENSSLDG00000001275) phyhd1 (ENSSLDG00000001560) dolk (ENSSLDG00000001575) lrrc8aa (ENSSLDG00000001579) ENSSLDG00000001593 Eupercaria ANCESTRAL SPECIES 13 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00940000177433 ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Ballan wrasse MODERN SPECIES 70 psmd5 (ENSLBEG00000023088) #18 B3GALT9 (ENSLBEG00000023111) #19 ENSLBEG00000023147 cdk5rap2 (ENSLBEG00000023310) ##22 NUP188 (ENSLBEG00000023382) dolk (ENSLBEG00000023453) phyhd1 (ENSLBEG00000023475) lrrc8aa (ENSLBEG00000023511) dnlz (ENSLBEG00000023529) uck1 (ENSLBEG00000023559) rapgef1b (ENSLBEG00000023625) ENSLBEG00000023813 NTNG2 (ENSLBEG00000023848) USP48 (ENSLBEG00000023923) ENSLBEG00000023976 dolpp1 (ENSLBEG00000024009) miga2 (ENSLBEG00000024061) st6galnac4 (ENSLBEG00000024169) ST6GALNAC6 (ENSLBEG00000024190) Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Gilthead seabream MODERN SPECIES 3 RNF165 (ENSSAUG00010021687) LOXHD1 (ENSSAUG00010021665) st8sia5 (ENSSAUG00010021660) rpl37 (ENSSAUG00010021655) PTGS1 (ENSSAUG00010021005) pdcl (ENSSAUG00010020998) rpl28 (ENSSAUG00010020997) ENSSAUG00010020994 SEC16A (ENSSAUG00010019069) notch1a (ENSSAUG00010015439) camsap1a (ENSSAUG00010015121) KCNT1 (ENSSAUG00010014789) psmd5 (ENSSAUG00010014769) #18 B3GALT9 (ENSSAUG00010014763) #19 ENSSAUG00010014760 ENSSAUG00010014714 ##22 NUP188 (ENSSAUG00010014672) dolk (ENSSAUG00010014663) phyhd1 (ENSSAUG00010014352) lrrc8aa (ENSSAUG00010014334) dnlz (ENSSAUG00010014332) ENSSAUG00010014330 uck1 (ENSSAUG00010014325) rapgef1b (ENSSAUG00010014293) NTNG2 (ENSSAUG00010014290) dolpp1 (ENSSAUG00010014289) miga2 (ENSSAUG00010014287) st6galnac4 (ENSSAUG00010014284) ST6GALNAC6 (ENSSAUG00010014283) spout1 (ENSSAUG00010014260) kyat1 (ENSSAUG00010014036) Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 European seabass MODERN SPECIES 9 fibcd1b (ENSDLAG00005027095) ENSDLAG00005022319 aif1l (ENSDLAG00005033318) ENSDLAG00005022332 ttc33 (ENSDLAG00005022383) ptger4b (ENSDLAG00005028637) ENSDLAG00005022393 ptcd2 (ENSDLAG00005029467) ENSDLAG00005022405 garnl3 (ENSDLAG00005022433) ptges (ENSDLAG00005033508) usp20 (ENSDLAG00005022729) ENSDLAG00005023312 ENSDLAG00005023314 #19 ENSDLAG00005023321 ENSDLAG00005023329 ##22 NUP188 (ENSDLAG00005023401) dolk (ENSDLAG00005028297) phyhd1 (ENSDLAG00005023448) lrrc8aa (ENSDLAG00005023479) uck1 (ENSDLAG00005023486) rapgef1b (ENSDLAG00005023495) ENSDLAG00005023653 dolpp1 (ENSDLAG00005023666) miga2 (ENSDLAG00005023677) ENSDLAG00005000515 spout1 (ENSDLAG00005000535) ENSDLAG00005000610 ENSDLAG00005030041 ENSDLAG00005000683 ENSDLAG00005000680 Large yellow croaker MODERN SPECIES 4 LOXHD1 (ENSLCRG00005000408) st8sia5 (ENSLCRG00005000384) rpl37 (ENSLCRG00005000370) PTGS1 (ENSLCRG00005000266) pdcl (ENSLCRG00005019859) ENSLCRG00005019858 ENSLCRG00005019857 rpl28 (ENSLCRG00005019856) ENSLCRG00005019853 ENSLCRG00005019752 notch1a (ENSLCRG00005018363) camsap1a (ENSLCRG00005017883) KCNT1 (ENSLCRG00005017821) psmd5 (ENSLCRG00005017758) #18 B3GALT9 (ENSLCRG00005017749) #19 ENSLCRG00005017715 ##22 NUP188 (ENSLCRG00005016511) dolk (ENSLCRG00005016504) phyhd1 (ENSLCRG00005016503) lrrc8aa (ENSLCRG00005016502) ENSLCRG00005016501 NPFFR2 (ENSLCRG00005016500) ENSLCRG00005016499 ENSLCRG00005016497 fbp1b (ENSLCRG00005016496) gas1b (ENSLCRG00005016493) c9 (ENSLCRG00005016489) dab2 (ENSLCRG00005016480) ENSLCRG00005016474 ENSLCRG00005016467 arid6 (ENSLCRG00005016464) Perciformes ANCESTRAL SPECIES 16 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Perciformes_a ANCESTRAL SPECIES 12 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Pike perch DUPLICATION Pike perch MODERN SPECIES 33 RNF165 (ENSSLUG00000013083) LOXHD1 (ENSSLUG00000013122) st8sia5 (ENSSLUG00000013165) rpl37 (ENSSLUG00000013190) ptgs1 (ENSSLUG00000013244) pdcl (ENSSLUG00000014454) rpl28 (ENSSLUG00000014460) ENSSLUG00000014465 SEC16A (ENSSLUG00000014475) notch1a (ENSSLUG00000014616) camsap1a (ENSSLUG00000015272) KCNT1 (ENSSLUG00000015334) psmd5 (ENSSLUG00000015606) #18 B3GALT9 (ENSSLUG00000015634) #19 ENSSLUG00000015642 cdk5rap2 (ENSSLUG00000015650) ##22 ENSSLUG00000015677 ##22 NUP188 (ENSSLUG00000015753) dolk (ENSSLUG00000015946) phyhd1 (ENSSLUG00000015986) lrrc8aa (ENSSLUG00000016208) dnlz (ENSSLUG00000016218) uck1 (ENSSLUG00000016221) rapgef1b (ENSSLUG00000016284) NTNG2 (ENSSLUG00000016689) dolpp1 (ENSSLUG00000016696) miga2 (ENSSLUG00000016718) st6galnac4 (ENSSLUG00000016758) ST6GALNAC6 (ENSSLUG00000016761) spout1 (ENSSLUG00000016781) kyat1 (ENSSLUG00000017112) Pike perch MODERN SPECIES 33 LOXHD1 (ENSSLUG00000013122) st8sia5 (ENSSLUG00000013165) rpl37 (ENSSLUG00000013190) ptgs1 (ENSSLUG00000013244) pdcl (ENSSLUG00000014454) rpl28 (ENSSLUG00000014460) ENSSLUG00000014465 SEC16A (ENSSLUG00000014475) notch1a (ENSSLUG00000014616) camsap1a (ENSSLUG00000015272) KCNT1 (ENSSLUG00000015334) psmd5 (ENSSLUG00000015606) #18 B3GALT9 (ENSSLUG00000015634) #19 ENSSLUG00000015642 cdk5rap2 (ENSSLUG00000015650) ##22 ENSSLUG00000015677 ##22 NUP188 (ENSSLUG00000015753) dolk (ENSSLUG00000015946) phyhd1 (ENSSLUG00000015986) lrrc8aa (ENSSLUG00000016208) dnlz (ENSSLUG00000016218) uck1 (ENSSLUG00000016221) rapgef1b (ENSSLUG00000016284) NTNG2 (ENSSLUG00000016689) dolpp1 (ENSSLUG00000016696) miga2 (ENSSLUG00000016718) st6galnac4 (ENSSLUG00000016758) ST6GALNAC6 (ENSSLUG00000016761) spout1 (ENSSLUG00000016781) kyat1 (ENSSLUG00000017112) ENSSLUG00000017120 Channel bull blenny MODERN SPECIES 3 ptger4b (ENSCGOG00000009318) MAP1B (ENSCGOG00000009659) ENSCGOG00000009664 ENSCGOG00000009691 ENSCGOG00000009710 ENSCGOG00000009720 RPL7A (ENSCGOG00000009742) usp20 (ENSCGOG00000010031) ptges (ENSCGOG00000010476) garnl3 (ENSCGOG00000010490) ENSCGOG00000011169 CACFD1 (ENSCGOG00000011176) psmd5 (ENSCGOG00000011178) #18 B3GALT9 (ENSCGOG00000011192) #19 ENSCGOG00000011197 cdk5rap2 (ENSCGOG00000011201) ##22 NUP188 (ENSCGOG00000011240) dolk (ENSCGOG00000011819) phyhd1 (ENSCGOG00000011822) lrrc8aa (ENSCGOG00000011909) dnlz (ENSCGOG00000011914) uck1 (ENSCGOG00000011922) rapgef1b (ENSCGOG00000012015) ENSCGOG00000012423 ENSCGOG00000012424 NTNG2 (ENSCGOG00000012425) ENSCGOG00000012426 dolpp1 (ENSCGOG00000012432) miga2 (ENSCGOG00000012443) ENSCGOG00000012447 dolpp1 (ENSCGOG00000012449) Cottioidei ANCESTRAL SPECIES 18 ENSGT00550000074846.jb.b ENSGT00390000016167 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00940000163466 ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Lumpfish MODERN SPECIES 3 bhmt (ENSCLMG00005010092) JMY (ENSCLMG00005010111) HOMER1 (ENSCLMG00005010119) ENSCLMG00005010565 tia1 (ENSCLMG00005010569) C2orf42 (ENSCLMG00005010818) ZNF703 (ENSCLMG00005010820) ENSCLMG00005010821 TRAF2 (ENSCLMG00005010822) ENSCLMG00005010858 pik3r1 (ENSCLMG00005014157) ENSCLMG00005014479 ENSCLMG00005016068 KCNT1 (ENSCLMG00005016070) ENSCLMG00005016085 cdk5rap2 (ENSCLMG00005016087) ##22 NUP188 (ENSCLMG00005016116) dolk (ENSCLMG00005017470) phyhd1 (ENSCLMG00005017471) ENSCLMG00005017472 NTNG2 (ENSCLMG00005017473) dolpp1 (ENSCLMG00005017474) miga2 (ENSCLMG00005017475) st6galnac4 (ENSCLMG00005017496) ST6GALNAC6 (ENSCLMG00005017497) spout1 (ENSCLMG00005017499) KYAT1 (ENSCLMG00005017500) KYAT1 (ENSCLMG00005017506) rtknb (ENSCLMG00005017535) ENSCLMG00005017536 aqp3b (ENSCLMG00005017537) Stickleback MODERN SPECIES 13 zgc:122979 (ENSGACG00000016157) atp5fa1 (ENSGACG00000016142) zgc:77838 (ENSGACG00000016140) RNF165 (ENSGACG00000016138) LOXHD1 (ENSGACG00000016133) st8sia5 (ENSGACG00000016126) rpl37 (ENSGACG00000016123) PTGS1 (ENSGACG00000016097) pdcl (ENSGACG00000016094) rpl28 (ENSGACG00000016089) SEC16A (ENSGACG00000016085) notch1a (ENSGACG00000016083) camsap1a (ENSGACG00000016079) KCNT1 (ENSGACG00000016074) ENSGACG00000016062 ENSGACG00000016058 ##22 NUP188 (ENSGACG00000016051) phyhd1 (ENSGACG00000016040) lrrc8aa (ENSGACG00000016038) dnlz (ENSGACG00000016036) uck1 (ENSGACG00000016027) rapgef1b (ENSGACG00000016022) NTNG2 (ENSGACG00000016021) dolpp1 (ENSGACG00000016018) miga2 (ENSGACG00000016016) st6galnac4 (ENSGACG00000016013) ST6GALNAC6 (ENSGACG00000016008) kyat1 (ENSGACG00000015991) ENSGACG00000015989 surf1 (ENSGACG00000015983) RPL7A (ENSGACG00000015957) Tetraodontidae ANCESTRAL SPECIES 19 ENSGT00940000156997.b ENSGT00390000018830.a.b ENSGT01030000234535.C ENSGT00390000005254 ENSGT00390000010743.b.a ENSGT00940000159569 ENSGT00390000008732.b ENSGT00390000011509 ENSGT00940000159324 ENSGT00940000157157.b.a.b ENSGT00950000182975.a.a.b.l ENSGT00940000156880.c.a ENSGT00390000013040 #18 ENSGT00940000162230 #19 ENSGT00940000162727.a.b ENSGT00950000183190.a.b.b ##22 ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00940000158797 ENSGT00390000006980 Tetraodon MODERN SPECIES 19 zgc:77838 (ENSTNIG00000007009) RNF165 (ENSTNIG00000006462) LOXHD1 (ENSTNIG00000006461) st8sia5 (ENSTNIG00000006460) rpl37 (ENSTNIG00000006459) ptgs1 (ENSTNIG00000006458) ENSTNIG00000001070 rpl28 (ENSTNIG00000002577) ENSTNIG00000002576 SEC16A (ENSTNIG00000002575) notch1a (ENSTNIG00000007203) camsap1a (ENSTNIG00000018750) KCNT1 (ENSTNIG00000018751) psmd5 (ENSTNIG00000018752) #18 ENSTNIG00000018753 ENSTNIG00000018754 ##22 NUP188 (ENSTNIG00000018755) dolk (ENSTNIG00000018757) phyhd1 (ENSTNIG00000018758) lrrc8aa (ENSTNIG00000018759) SHC3 (ENSTNIG00000018760) S1PR3 (ENSTNIG00000018761) ZBTB7C (ENSTNIG00000018762) CTIF (ENSTNIG00000018763) smad7 (ENSTNIG00000018764) DYM (ENSTNIG00000018765) nop14 (ENSTNIG00000018766) SNCA (ENSTNIG00000000823) klf4 (ENSTNIG00000019371) RAD23B (ENSTNIG00000019370) ZNF462 (ENSTNIG00000018728) Fugu MODERN SPECIES 18 atp5fa1 (ENSTRUG00000018034) zgc:77838 (ENSTRUG00000025151) RNF165 (ENSTRUG00000018046) st8sia5 (ENSTRUG00000018059) rpl37 (ENSTRUG00000018067) PTGS1 (ENSTRUG00000018069) pdcl (ENSTRUG00000024706) rpl28 (ENSTRUG00000025383) ENSTRUG00000031543 ENSTRUG00000018095 notch1a (ENSTRUG00000018113) KCNT1 (ENSTRUG00000021073) psmd5 (ENSTRUG00000018185) #18 B3GALT9 (ENSTRUG00000018190) #19 ENSTRUG00000027922 ENSTRUG00000018229 ##22 NUP188 (ENSTRUG00000018293) dolk (ENSTRUG00000018325) lrrc8aa (ENSTRUG00000018330) dnlz (ENSTRUG00000032319) uck1 (ENSTRUG00000018333) rapgef1b (ENSTRUG00000018338) NTNG2 (ENSTRUG00000018358) dolpp1 (ENSTRUG00000018367) miga2 (ENSTRUG00000018370) st6galnac4 (ENSTRUG00000018377) ST6GALNAC6 (ENSTRUG00000023899) spout1 (ENSTRUG00000024910) kyat1 (ENSTRUG00000018388) surf6 (ENSTRUG00000023872) surf1 (ENSTRUG00000025293) Spotted gar MODERN SPECIES 660 pmpca (ENSLOCG00000003505) inpp5e (ENSLOCG00000003484) SEC16A (ENSLOCG00000003461) notch1a (ENSLOCG00000003419) ubac1 (ENSLOCG00000003381) camsap1b (ENSLOCG00000003342) ENSLOCG00000003326 KCNT1 (ENSLOCG00000003283) ENSLOCG00000003275 B3GALT9 (ENSLOCG00000017340) #19 ENSLOCG00000003261 psmd5 (ENSLOCG00000003231) #18 col27a1b (ENSLOCG00000003177) zgc:101858 (ENSLOCG00000003168) PPIL3 (ENSLOCG00000003154) ENSLOCG00000003100 ##22 ENSLOCG00000003085 rpl28 (ENSLOCG00000003073) pdcl (ENSLOCG00000003058) PTGS1 (ENSLOCG00000003036) mrrf (ENSLOCG00000003021) rbm18 (ENSLOCG00000003002) lhx6a (ENSLOCG00000002986) morn5 (ENSLOCG00000002968) ndufa8 (ENSLOCG00000002944) si:ch211-243g18.2 (ENSLOCG00000002921) zbtb26 (ENSLOCG00000002911) ENSLOCG00000002894 RABGAP1 (ENSLOCG00000002828) STRBP (ENSLOCG00000002814) sh2d3cb (ENSLOCG00000002795) Vertebrata ANCESTRAL SPECIES 991 ENSGT00950000183190.a.a ##22 ENSGT00950000183190.a.b.a.b ##22 Cyclostomata ANCESTRAL SPECIES 1115 ENSGT00950000183190.a.a ##22 ENSGT00950000183190.a.b.a.b ##22 Lamprey MODERN SPECIES 1863 ENSPMAG00000008626 ##22 rpl28 (ENSPMAG00000008617) ehmt1b (ENSPMAG00000008612) Hagfish MODERN SPECIES 1019 ENSEBUG00000008189 ENSEBUG00000008867 ptena (ENSEBUG00000015793) ENSEBUG00000014252 b3galt2 (ENSEBUG00000007729) RABGAP1 (ENSEBUG00000009561) kifap3b (ENSEBUG00000006977) ENSEBUG00000011379 PRRX2 (ENSEBUG00000008573) ENSEBUG00000014556 ##22 ENSEBUG00000006123 ##22 NELFE (ENSEBUG00000017070) ENSEBUG00000012190 ENSEBUG00000000775 ENSEBUG00000009350 rpl28 (ENSEBUG00000009129) ENSEBUG00000008200 ENSEBUG00000006472 ENSEBUG00000013992 ENSEBUG00000010578 ENSEBUG00000016941 uck2b (ENSEBUG00000016796) angptl1a (ENSEBUG00000011811) ENSEBUG00000014058 mrps14 (ENSEBUG00000012209) Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT00950000183190.a.a.a ##22 Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES 84 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00940000159391 ENSGT00390000014594 ENSGT00390000014781 ENSGT01030000234558.C ENSGT00940000156012 ENSGT00390000014243 ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00390000010743.a ENSGT01030000234606.b ENSGT00940000154654 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00530000063604.B Actinopterygii ANCESTRAL SPECIES 84 ENSGT00390000010743.a ENSGT01030000234606.b ENSGT00940000154654 ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00390000013877 ENSGT01030000234618.B ENSGT00940000165818 ENSGT00560000078707 ENSGT00940000159244 ENSGT00500000044895 Neopterygii ANCESTRAL SPECIES 78 ENSGT00390000010743.a ENSGT01030000234606.b ENSGT00940000154654 ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000166185 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00390000013877 ENSGT01030000234618.B ENSGT00940000165818 ENSGT00560000078707 ENSGT00940000159244 Spotted gar MODERN SPECIES 648 odr4 (ENSLOCG00000001553) pdcb (ENSLOCG00000001585) ptgs2b (ENSLOCG00000001597) pla2g4aa (ENSLOCG00000001619) arpc5a (ENSLOCG00000001642) ENSLOCG00000001656 ivns1abpb (ENSLOCG00000001731) SWT1 (ENSLOCG00000001749) TRMT1L (ENSLOCG00000001781) rnf2 (ENSLOCG00000001809) niban1a (ENSLOCG00000001823) kifap3b (ENSLOCG00000001850) ntmt2 (ENSLOCG00000001865) gorab (ENSLOCG00000001880) prrx1 (ENSLOCG00000001893) ENSLOCG00000001920 ##22 PRKAB2 (ENSLOCG00000001948) ENSLOCG00000017732 ENSLOCG00000001967 ncf2 (ENSLOCG00000001984) smg7 (ENSLOCG00000002010) nmnat2 (ENSLOCG00000002037) LAMC1 (ENSLOCG00000002064) lamc1 (ENSLOCG00000002091) SHCBP1L (ENSLOCG00000002143) dhx9 (ENSLOCG00000002158) ENSLOCG00000002189 brinp2 (ENSLOCG00000002216) ASTN1 (ENSLOCG00000002232) PAPPA2 (ENSLOCG00000002271) cop1 (ENSLOCG00000002311) Osteoglossocephalai ANCESTRAL SPECIES 150 ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a.g.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000156132.g Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.a ##22 Euteleosteomorpha ANCESTRAL SPECIES 70 ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00530000063498.B ENSGT00940000166530 ENSGT00940000157693 ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725 ENSGT00390000003015.c ENSGT01030000235036 ENSGT00940000175705 ENSGT00390000014984 Acanthomorphata ANCESTRAL SPECIES 91 ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b ENSGT00730000111085.A ENSGT00530000063498.B Euacanthomorphacea ANCESTRAL SPECIES 534 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a Percomorphaceae ANCESTRAL SPECIES 470 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a Percomorphaceae_B ANCESTRAL SPECIES 331 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a Ovalentaria ANCESTRAL SPECIES 311 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a Atherinomorphae ANCESTRAL SPECIES 315 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a Cyprinodontiformes ANCESTRAL SPECIES 305 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a Cyprinodontoidei ANCESTRAL SPECIES 355 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a Poeciliinae ANCESTRAL SPECIES 7 ENSGT00940000156511.b.db ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00530000063498.B ENSGT00950000183052.b.c.b.b.b.a.b.a ENSGT00730000111085.A ENSGT00950000182946.lb.b.g.x ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00990000203619.A.b.b.b.b.a.a.g ENSGT01090000260029.a.b.a ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a ENSGT00940000155705.b ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.g.w.a ENSGT00950000182946.lb.b.g.w.b ENSGT01100000263489.a.a.b.b.f.a.a.d ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.b ENSGT01100000263533.b.b.b.a.b.b.b.b.b.b.b ENSGT00940000159037 ENSGT00940000160231 ENSGT00940000166036 ENSGT00940000165051 ENSGT00940000157046.D.d.d.a.a.b.b.b ENSGT00950000183171.A.b.a.b Poecilia ANCESTRAL SPECIES 1 ENSGT01100000263489.a.a.b.b.f.a.b.b.d.a.a.a.a.a ENSGT00950000182774.b.a.b.a.b.a.b.c.b.a.b.b ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.b.b.b.b.b ENSGT01030000235075.a ENSGT00940000157046.D.d.d.a.a.b.a.a.a.a ENSGT00730000111085.A ENSGT00950000182946.lb.b.g.x ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00990000203619.A.b.b.b.b.a.a.g ENSGT01090000260029.a.b.a ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a ENSGT00940000155705.b ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.g.w.a.b ENSGT00950000182946.lb.b.g.w.b ENSGT01100000263489.a.a.b.b.f.a.a.d ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.b ENSGT01100000263533.b.b.b.a.b.b.b.b.b.b.b ENSGT00940000163467.a.b.b.a.a.j.g.a.b ENSGT00940000159037 ENSGT00940000160231 ENSGT00940000166036 ENSGT00940000165051 ENSGT00940000157046.D.d.d.a.a.b.b.b NAME_6 ANCESTRAL SPECIES 299 ENSGT01100000263483.E.a.c.b.a.b ENSGT00730000111085.A ENSGT00950000182946.lb.b.g.x ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00990000203619.A.b.b.b.b.a.a.g ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a ENSGT00940000155705.b ENSGT00940000158851 ENSGT00530000063632.A Amazon molly MODERN SPECIES 490 ENSPFOG00000022677 ENSPFOG00000022026 ENSPFOG00000024787 ENSPFOG00000024048 ENSPFOG00000020390 ENSPFOG00000004363 prpf38a (ENSPFOG00000004248) ENSPFOG00000004243 TRMT1L (ENSPFOG00000003872) niban1a (ENSPFOG00000003690) kifap3a (ENSPFOG00000003275) ntmt2 (ENSPFOG00000003229) gorab (ENSPFOG00000003166) prrx1b (ENSPFOG00000003097) ENSPFOG00000022245 ENSPFOG00000002601 ##22 ENSPFOG00000021901 MAST2 (ENSPFOG00000002082) PIK3R3 (ENSPFOG00000001877) TSPAN1 (ENSPFOG00000001818) pomgnt1 (ENSPFOG00000001385) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.a ##22 Eupercaria ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.a ##22 Tetraodontidae ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.a ##22 Tetraodon MODERN SPECIES 23 entpd3 (ENSTNIG00000019119) ENSTNIG00000019120 cobl (ENSTNIG00000019121) ENSTNIG00000001750 ENSTNIG00000019122 CCR8 (ENSTNIG00000019123) ENSTNIG00000019124 ENSTNIG00000019063 ENSTNIG00000004421 ADCY2 (ENSTNIG00000004420) ENSTNIG00000003741 ENSTNIG00000000537 ADAMTS16 (ENSTNIG00000003742) irx2a (ENSTNIG00000007221) irx4a (ENSTNIG00000007220) ENSTNIG00000001193 ##22 LPCAT1 (ENSTNIG00000007219) slc6a3 (ENSTNIG00000007218) DCDC2 (ENSTNIG00000007217) nrsn1 (ENSTNIG00000007216) sox4b (ENSTNIG00000009619) CDKAL1 (ENSTNIG00000009620) E2F3 (ENSTNIG00000009621) mboat1 (ENSTNIG00000009622) TMEM65 (ENSTNIG00000009623) MTSS1 (ENSTNIG00000009624) ENSTNIG00000009625 mal2 (ENSTNIG00000009626) ENSTNIG00000000468 ENSTNIG00000009627 CARMIL1 (ENSTNIG00000009628) Protacanthopterygii ANCESTRAL SPECIES 30 ENSGT00390000012568.l ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a.c ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.b ENSGT00940000158851 ENSGT00950000182946.lb.b.k.a ENSGT00730000111085.A ENSGT00530000063498.B ENSGT00940000166530 ENSGT00940000157693 ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725 ENSGT00390000003015.c ENSGT01030000235036 ENSGT00620000088018.v ENSGT00940000175705 ENSGT00390000014984 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 36 ENSGT00390000012568.l ENSGT00940000156236.a.a ENSGT00390000010743.a.a.f ENSGT01030000234606.b.e.b.h ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635.q ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b.d ENSGT00390000003574.a.c ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.e.a ENSGT00950000183190.a.a.a.b.d ##22 ENSGT00950000183190.a.a.a.a.a.a.a ##22 ENSGT00940000155705.b.v ENSGT00940000156259.a.a.d ENSGT00940000158851 ENSGT00950000182946.lb.b.k.a.b ENSGT00730000111085.A.gb ENSGT00530000063498.B ENSGT00940000166530.d ENSGT00940000157693.p ENSGT00940000173535 ENSGT00940000166725.j ENSGT00390000003015.c.c ENSGT00620000088018.v.b ENSGT00940000175705 ENSGT00390000014984.r ENSGT00390000006224.k Salmoninae_a ANCESTRAL SPECIES 46 ENSGT00940000155117.f.a.g ENSGT00390000012568.l ENSGT00940000156236.a.a ENSGT00390000010743.a.a.f ENSGT01030000234606.b.e.b.h ENSGT00940000154654.a.b ENSGT00940000154614.le ENSGT00940000155635.q ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b.d ENSGT00390000003574.a.c ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.e.a ENSGT00950000183190.a.a.a.a.a.a.a ##22 ENSGT00940000155705.b.v ENSGT00940000156259.a.a.d ENSGT00940000158851 ENSGT00950000182946.lb.b.k.a.b ENSGT00730000111085.A.gb ENSGT00530000063498.B ENSGT00940000166530.d ENSGT00940000157693.p ENSGT00940000173535 ENSGT00940000166725.j ENSGT00390000003015.c.c ENSGT00620000088018.v.b ENSGT00390000014984.r ENSGT00390000006224.k ENSGT00940000156282.a.b.b Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00940000155117.f.a.g ENSGT00390000012568.l ENSGT00940000156236.a.a ENSGT00390000010743.a.a.f ENSGT01030000234606.b.e.b.h ENSGT00940000154654.a.b ENSGT00940000154614.le ENSGT00940000155635.q ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b.d ENSGT00390000003574.a.c ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.e.a ENSGT00950000183190.a.a.a.a.a.a.a ##22 ENSGT00940000155705.b.v ENSGT00940000156259.a.a.d ENSGT00940000158851 ENSGT00950000182946.lb.b.k.a.b ENSGT00730000111085.A.gb ENSGT00530000063498.B ENSGT00940000166530.d ENSGT00940000157693.p ENSGT00940000173535 ENSGT00940000166725.j ENSGT00390000003015.c.c ENSGT00620000088018.v.b ENSGT00390000014984.r ENSGT00390000006224.k ENSGT00940000156282.a.b.b Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 26 PLA2G4A (ENSOMYG00000009095) arpc5b (ENSOMYG00000059388) ENSOMYG00000070670 ENSOMYG00000007823 ivns1abpa (ENSOMYG00000005937) ENSOMYG00000005863 TRMT1L (ENSOMYG00000033328) niban1a (ENSOMYG00000033306) kifap3a (ENSOMYG00000031488) ntmt2 (ENSOMYG00000031264) gorab (ENSOMYG00000031254) prrx1b (ENSOMYG00000009768) ENSOMYG00000063736 ENSOMYG00000050606 ##22 ENSOMYG00000031208 ##22 ENSOMYG00000074663 ##22 MAST2 (ENSOMYG00000030907) ENSOMYG00000060619 ENSOMYG00000003122 ENSOMYG00000057624 ENSOMYG00000030788 TSPAN1 (ENSOMYG00000030775) ENSOMYG00000030768 prpf38a (ENSOMYG00000030755) orc1 (ENSOMYG00000030223) mpl (ENSOMYG00000029911) tie1 (ENSOMYG00000029871) si:ch73-185c24.2 (ENSOMYG00000029835) ap1m3 (ENSOMYG00000029640) TMEM125 (ENSOMYG00000029337) CFAP57 (ENSOMYG00000067259) Rainbow trout MODERN SPECIES 26 ptgs2b (ENSOMYG00000009717) PLA2G4A (ENSOMYG00000009095) arpc5b (ENSOMYG00000059388) ENSOMYG00000070670 ENSOMYG00000007823 ivns1abpa (ENSOMYG00000005937) ENSOMYG00000005863 TRMT1L (ENSOMYG00000033328) niban1a (ENSOMYG00000033306) kifap3a (ENSOMYG00000031488) ntmt2 (ENSOMYG00000031264) gorab (ENSOMYG00000031254) prrx1b (ENSOMYG00000009768) ENSOMYG00000063736 ENSOMYG00000050606 ##22 ENSOMYG00000031208 ##22 ENSOMYG00000074663 ##22 MAST2 (ENSOMYG00000030907) ENSOMYG00000060619 ENSOMYG00000003122 ENSOMYG00000057624 ENSOMYG00000030788 TSPAN1 (ENSOMYG00000030775) ENSOMYG00000030768 prpf38a (ENSOMYG00000030755) orc1 (ENSOMYG00000030223) mpl (ENSOMYG00000029911) tie1 (ENSOMYG00000029871) si:ch73-185c24.2 (ENSOMYG00000029835) ap1m3 (ENSOMYG00000029640) TMEM125 (ENSOMYG00000029337) Oncorhynchus_a ANCESTRAL SPECIES 63 ENSGT00940000155117.f.a.g ENSGT00390000012568.l ENSGT00940000156236.a.a ENSGT00390000010743.a.a.f ENSGT01030000234606.b.e.b.h ENSGT00940000154654.a.b ENSGT00940000154614.le ENSGT00940000155635.q ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b.d ENSGT00390000003574.a.c ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.e.a ENSGT00950000183190.a.a.a.a.a.a.a ##22 ENSGT00940000155705.b.v ENSGT00940000156259.a.a.d ENSGT00940000158851 ENSGT00950000182946.lb.b.k.a.b ENSGT00730000111085.A.gb ENSGT00530000063498.B ENSGT00940000166530.d ENSGT00940000157693.p ENSGT00940000166725.j ENSGT00390000003015.c.c ENSGT00620000088018.v.b ENSGT00390000014984.r ENSGT00390000006224.k ENSGT00940000156282.a.b.b Coho salmon MODERN SPECIES 4 ODR4 (ENSOKIG00005035361) pdcb (ENSOKIG00005035377) ptgs2b (ENSOKIG00005035490) PLA2G4A (ENSOKIG00005037556) arpc5b (ENSOKIG00005039322) ENSOKIG00005039494 ivns1abpa (ENSOKIG00005039893) ENSOKIG00005040110 ENSOKIG00005040131 TRMT1L (ENSOKIG00005040163) niban1a (ENSOKIG00005040279) kifap3a (ENSOKIG00005040351) ntmt2 (ENSOKIG00005040842) gorab (ENSOKIG00005040858) prrx1b (ENSOKIG00005040901) ENSOKIG00005040983 ##22 MAST2 (ENSOKIG00005041157) ENSOKIG00005044310 TSPAN1 (ENSOKIG00005044373) ENSOKIG00005044389 prpf38a (ENSOKIG00005044396) orc1 (ENSOKIG00005044423) mpl (ENSOKIG00005044515) tie1 (ENSOKIG00005044563) ap1m3 (ENSOKIG00005044616) ENSOKIG00005044851 TMEM125 (ENSOKIG00005044858) CFAP57 (ENSOKIG00005044864) EBNA1BP2 (ENSOKIG00005044875) EBNA1BP2 (ENSOKIG00005044886) cfap144 (ENSOKIG00005044899) Salmo ANCESTRAL SPECIES 20 ENSGT00940000154967.b.b.a ENSGT00940000155117.f.a.g ENSGT00940000156236.a.a ENSGT00390000010743.a.a.f ENSGT01030000234606.b.e.b.h ENSGT00940000154654.a.b.f ENSGT00940000154614.le ENSGT00940000155635.q ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b.d ENSGT00390000003574.a.c ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.e.a ENSGT00950000183190.a.a.a.a.a.a.a ##22 ENSGT00940000155705.b.v ENSGT00940000156259.a.a.d ENSGT00940000158851 ENSGT00950000182946.lb.b.k.a.b ENSGT00730000111085.A.gb ENSGT00530000063498.B ENSGT00940000166530.d ENSGT00940000157693.p ENSGT00940000173535 ENSGT00940000166725.j ENSGT00390000003015.c.c ENSGT00620000088018.v.b ENSGT00390000014984.r ENSGT00390000006224.k ENSGT00940000156282.a.b.b River trout MODERN SPECIES 14 pdcb (ENSSTUG00000022871) ENSSTUG00000022868 ptgs2b (ENSSTUG00000022215) PLA2G4A (ENSSTUG00000020934) arpc5b (ENSSTUG00000020817) ENSSTUG00000020388 ivns1abpa (ENSSTUG00000020215) ENSSTUG00000020102 TRMT1L (ENSSTUG00000019927) niban1a (ENSSTUG00000019908) kifap3a (ENSSTUG00000019509) ENSSTUG00000019425 ntmt2 (ENSSTUG00000019418) gorab (ENSSTUG00000019396) prrx1b (ENSSTUG00000019331) ENSSTUG00000019159 ##22 ENSSTUG00000019138 MAST2 (ENSSTUG00000017439) ENSSTUG00000016990 TSPAN1 (ENSSTUG00000016940) ENSSTUG00000016930 prpf38a (ENSSTUG00000016919) orc1 (ENSSTUG00000046018) mpl (ENSSTUG00000046009) tie1 (ENSSTUG00000045449) si:ch73-185c24.2 (ENSSTUG00000045407) ap1m3 (ENSSTUG00000044934) TMEM125 (ENSSTUG00000044909) ENSSTUG00000044901 ebna1bp2 (ENSSTUG00000044871) cfap144 (ENSSTUG00000044860) Atlantic salmon MODERN SPECIES 1 ENSSSAG00000082185 pdcb (ENSSSAG00000054505) ptgs2b (ENSSSAG00000076453) PLA2G4A (ENSSSAG00000065474) arpc5b (ENSSSAG00000107373) ENSSSAG00000066417 ivns1abpa (ENSSSAG00000052777) ENSSSAG00000103801 TRMT1L (ENSSSAG00000052728) niban1a (ENSSSAG00000111722) kifap3a (ENSSSAG00000047655) mettl11b (ENSSSAG00000047486) ENSSSAG00000116366 gorab (ENSSSAG00000047473) prrx1b (ENSSSAG00000116266) ENSSSAG00000084820 ##22 ENSSSAG00000099981 MAST2 (ENSSSAG00000046565) ENSSSAG00000079094 ENSSSAG00000117564 TSN1 (ENSSSAG00000046376) ENSSSAG00000108232 ENSSSAG00000095271 ENSSSAG00000046307 prpf38a (ENSSSAG00000046270) orc1 (ENSSSAG00000045721) mpl (ENSSSAG00000045689) tie1 (ENSSSAG00000045503) si:ch73-185c24.2 (ENSSSAG00000045479) ap1m3 (ENSSSAG00000079283) TMEM125 (ENSSSAG00000086858) Huchen MODERN SPECIES 2686 ENSHHUG00000042463 ##22 ENSHHUG00000042467 ##22 ENSHHUG00000042491 tekt4 (ENSHHUG00000042493) ENSHHUG00000042498 Salmoninae ANCESTRAL SPECIES 385 ENSGT00940000155117.f.a.h ENSGT00390000010743.a.a.e ENSGT01030000234606.b.e.b.g ENSGT00940000155635.r ENSGT00940000154149.b.a.g.b.c ENSGT00390000003574.a.d ENSGT00940000159466.e.b ENSGT00950000183190.a.a.a.b.c ##22 ENSGT00950000183190.a.a.a.a.a.a.b ##22 ENSGT00940000155705.b.u ENSGT00940000156259.a.a.c ENSGT00530000063632.A ENSGT00950000182946.lb.b.k.a.a ENSGT00730000111085.A.fb ENSGT00940000166530.c ENSGT00940000157693.o ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725.i ENSGT00390000003015.c.d ENSGT01030000235036 ENSGT00620000088018.v.a ENSGT00390000014984.q ENSGT00390000006224.l Huchen MODERN SPECIES 1684 ENSHHUG00000051627 ##22 ENSHHUG00000051636 ENSHHUG00000051641 Salmoninae_a ANCESTRAL SPECIES 103 ENSGT00940000157019.g.a.h ENSGT00390000007029.e.a.b ENSGT00390000007336.a.a.c ENSGT00940000155446.g ENSGT00940000158821.k ENSGT00940000156725.e.a ENSGT00940000155152.f.b.h ENSGT00940000155117.f.a.h ENSGT00390000010743.a.a.e ENSGT01030000234606.b.e.b.g ENSGT00940000155635.r ENSGT00940000154149.b.a.g.b.c ENSGT00390000003574.a.d ENSGT00940000159466.e.b ENSGT00950000183190.a.a.a.b.c ##22 ENSGT00950000183190.a.a.a.a.a.a.b ##22 ENSGT00940000155705.b.u ENSGT00940000156259.a.a.c ENSGT00530000063632.A ENSGT00950000182946.lb.b.k.a.a ENSGT00730000111085.A.fb ENSGT00940000166530.c ENSGT00940000157693.o ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725.i ENSGT00390000003015.c.d ENSGT01030000235036 ENSGT00620000088018.v.a ENSGT00390000014984.q ENSGT00390000006224.l Salmo ANCESTRAL SPECIES 64 ENSGT00390000007029.e.a.b ENSGT00390000007336.a.a.c ENSGT00940000155446.g ENSGT00940000158821.k ENSGT00940000156725.e.a ENSGT00940000155152.f.b.h ENSGT00940000155117.f.a.h ENSGT00390000010743.a.a.e ENSGT01030000234606.b.e.b.g ENSGT00940000154654.a.b.e ENSGT00940000155635.r ENSGT00940000154149.b.a.g.b.c ENSGT00390000003574.a.d ENSGT00940000159466.e.b ENSGT00950000183190.a.a.a.b.c ##22 ENSGT00950000183190.a.a.a.a.a.a.b ##22 ENSGT00940000155705.b.u ENSGT00940000156259.a.a.c ENSGT00530000063632.A ENSGT00950000182946.lb.b.k.a.a ENSGT00730000111085.A.fb ENSGT00940000166530.c ENSGT00940000157693.o ENSGT00510000048988 ENSGT00940000166725.i ENSGT00390000003015.c.d ENSGT00620000088018.v.a ENSGT00390000014984.q ENSGT00390000006224.l ENSGT00940000156282.a.b.a ENSGT00940000154819.a.a.a.g.a Atlantic salmon MODERN SPECIES 15 pde6d (ENSSSAG00000076055) ENSSSAG00000076064 ENSSSAG00000076289 DENND1B (ENSSSAG00000076291) LHX9 (ENSSSAG00000077539) nek7 (ENSSSAG00000077057) ENSSSAG00000077019 ENSSSAG00000090467 ptgs2b (ENSSSAG00000054742) ENSSSAG00000076307 ivns1abpa (ENSSSAG00000077563) ENSSSAG00000111849 ENSSSAG00000077689 ENSSSAG00000113189 ENSSSAG00000078794 ##22 ENSSSAG00000078806 ##22 ENSSSAG00000090366 ENSSSAG00000120618 ENSSSAG00000097280 ENSSSAG00000110126 ENSSSAG00000079173 ENSSSAG00000079187 pr38a (ENSSSAG00000079192) TPOR (ENSSSAG00000079193) tie1 (ENSSSAG00000079214) ap1m3 (ENSSSAG00000045323) C1orf210 (ENSSSAG00000079365) TMEM125 (ENSSSAG00000119454) CFAP57 (ENSSSAG00000079370) ebna1bp2 (ENSSSAG00000079391) cfap144 (ENSSSAG00000092934) River trout MODERN SPECIES 33 ABHD8 (ENSSTUG00000000828) DENND1B (ENSSTUG00000000837) ENSSTUG00000000854 lhx9 (ENSSTUG00000000861) nek7 (ENSSTUG00000000907) crb1 (ENSSTUG00000001111) b3galt2 (ENSSTUG00000001121) ptgs2b (ENSSTUG00000001191) PLA2G4A (ENSSTUG00000001927) arpc5b (ENSSTUG00000002513) ivns1abpa (ENSSTUG00000002544) niban1a (ENSSTUG00000002614) kifap3a (ENSSTUG00000002766) prrx1b (ENSSTUG00000004069) ENSSTUG00000004149 ##22 ENSSTUG00000004176 ##22 MAST2 (ENSSTUG00000004246) PIK3R3 (ENSSTUG00000004411) pomgnt1 (ENSSTUG00000005824) ENSSTUG00000005913 prpf38a (ENSSTUG00000005917) mpl (ENSSTUG00000005928) tie1 (ENSSTUG00000005979) C1orf210 (ENSSTUG00000006574) ap1m3 (ENSSTUG00000006631) TMEM125 (ENSSTUG00000008099) CFAP57 (ENSSTUG00000008107) ebna1bp2 (ENSSTUG00000008168) cfap144 (ENSSTUG00000008194) dmrt2b (ENSSTUG00000008202) lrp8 (ENSSTUG00000008237) Oncorhynchus ANCESTRAL SPECIES ENSGT00390000007029.e.a.b ENSGT00390000007336.a.a.c ENSGT00940000155446.g ENSGT00940000158821.k ENSGT00940000156725.e.a ENSGT00940000155152.f.b.h ENSGT00940000155117.f.a.h ENSGT00390000010743.a.a.e ENSGT01030000234606.b.e.b.g ENSGT00940000155635.r ENSGT00940000154149.b.a.g.b.c ENSGT00390000003574.a.d ENSGT01010000229774 ENSGT00940000159466.e.b ENSGT00950000183190.a.a.a.b.c ##22 ENSGT00950000183190.a.a.a.a.a.a.b ##22 ENSGT00940000155705.b.u ENSGT00940000156259.a.a.c ENSGT00530000063632.A ENSGT00730000111085.A.fb ENSGT00940000166530.c ENSGT00940000157693.o ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725.i ENSGT00390000003015.c.d ENSGT01030000235036 ENSGT00620000088018.v.a ENSGT00390000014984.q ENSGT00390000006224.l ENSGT00940000156282.a.b.a Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000160748.a.d ENSGT00940000157019.g.a.h ENSGT00390000007029.e.a.b ENSGT00390000007336.a.a.c ENSGT00940000155446.g ENSGT00940000158821.k ENSGT00940000156725.e.a ENSGT00940000155152.f.b.h ENSGT00390000010743.a.a.e ENSGT01030000234606.b.e.b.g ENSGT00940000155635.r ENSGT00940000154149.b.a.g.b.c ENSGT00390000003574.a.d ENSGT01010000229774 ENSGT00940000159466.e.b ENSGT00950000183190.a.a.a.a.a.a.b ##22 ENSGT00940000155705.b.u ENSGT00940000156259.a.a.c ENSGT00530000063632.A ENSGT00730000111085.A.fb ENSGT00940000166530.c ENSGT00940000157693.o ENSGT01030000234931 ENSGT00940000166725.i ENSGT00390000003015.c.d ENSGT01030000235036 ENSGT00620000088018.v.a ENSGT00390000014984.q ENSGT00390000006224.l ENSGT00940000156282.a.b.a ENSGT00940000154819.a.a.a.g.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES ANO8 (ENSOTSG00005028038) dda1 (ENSOTSG00005028035) ABHD8 (ENSOTSG00005028032) DENND1B (ENSOTSG00005028022) lhx9 (ENSOTSG00005028017) nek7 (ENSOTSG00005026827) crb1 (ENSOTSG00005026812) ENSOTSG00005026811 ENSOTSG00005026809 ptgs2b (ENSOTSG00005023806) PLA2G4A (ENSOTSG00005023754) ivns1abpa (ENSOTSG00005023749) niban1a (ENSOTSG00005023747) kifap3a (ENSOTSG00005014519) prrx1b (ENSOTSG00005014500) ENSOTSG00005014483 ##22 ENSOTSG00005014213 ENSOTSG00005014210 pomgnt1 (ENSOTSG00005014187) prpf38a (ENSOTSG00005014183) mpl (ENSOTSG00005014182) tie1 (ENSOTSG00005014172) ENSOTSG00005014171 ap1m3 (ENSOTSG00005013055) TMEM125 (ENSOTSG00005013048) ENSOTSG00005013047 CFAP57 (ENSOTSG00005013041) ebna1bp2 (ENSOTSG00005013039) cfap144 (ENSOTSG00005013038) dmrt2b (ENSOTSG00005013037) lrp8 (ENSOTSG00005013035) Chinook salmon MODERN SPECIES 29 ENSOTSG00005027663 b3galt2 (ENSOTSG00005027648) ODR4 (ENSOTSG00005027646) pdcb (ENSOTSG00005027644) ptgs2b (ENSOTSG00005025813) ENSOTSG00005025794 ENSOTSG00005025791 ivns1abpa (ENSOTSG00005025576) ENSOTSG00005025575 TRMT1L (ENSOTSG00005025574) niban1a (ENSOTSG00005025549) kifap3a (ENSOTSG00005025515) ntmt2 (ENSOTSG00005025507) gorab (ENSOTSG00005025505) prrx1b (ENSOTSG00005025504) ENSOTSG00005025503 ##22 ENSOTSG00005025502 mrpl46 (ENSOTSG00005025501) rln3b (ENSOTSG00005025500) ENSOTSG00005025499 prpf38a (ENSOTSG00005025498) ENSOTSG00005025497 ENSOTSG00005025496 ENSOTSG00005025495 ENSOTSG00005023224 si:ch73-185c24.2 (ENSOTSG00005025494) TMEM125 (ENSOTSG00005023213) cfap144 (ENSOTSG00005024993) ebna1bp2 (ENSOTSG00005024992) ENSOTSG00005024990 dmrt2b (ENSOTSG00005024989) Coho salmon MODERN SPECIES 1 DDA1 (ENSOKIG00005011055) ABHD8 (ENSOKIG00005011045) DENND1B (ENSOKIG00005011000) LHX9 (ENSOKIG00005010851) ENSOKIG00005010819 ENSOKIG00005010807 ptgs2b (ENSOKIG00005010606) PLA2G4A (ENSOKIG00005008974) ENSOKIG00005008894 ivns1abpa (ENSOKIG00005008870) NIBAN1 (ENSOKIG00005008670) ENSOKIG00005008659 KIFAP3 (ENSOKIG00005008466) ENSOKIG00005008408 PRRX1 (ENSOKIG00005008357) ENSOKIG00005008304 ##22 MAST2 (ENSOKIG00005006912) ENSOKIG00005005364 pomgnt1 (ENSOKIG00005005244) prpf38a (ENSOKIG00005005206) mpl (ENSOKIG00005005163) tie1 (ENSOKIG00005004729) ENSOKIG00005004696 ap1m3 (ENSOKIG00005004338) TMEM125 (ENSOKIG00005004199) ENSOKIG00005004187 CFAP57 (ENSOKIG00005004165) ebna1bp2 (ENSOKIG00005004146) cfap144 (ENSOKIG00005004135) ENSOKIG00005004130 lrp8 (ENSOKIG00005003625) Rainbow trout MODERN SPECIES 22 ENSOMYG00000050036 ENSOMYG00000054799 nek7 (ENSOMYG00000054062) ENSOMYG00000011730 ENSOMYG00000071691 ptgs2b (ENSOMYG00000010634) ENSOMYG00000010353 ivns1abpa (ENSOMYG00000010178) ENSOMYG00000056789 ENSOMYG00000010134 ENSOMYG00000056400 ENSOMYG00000009964 ENSOMYG00000009797 ENSOMYG00000031234 ENSOMYG00000009726 ##22 ENSOMYG00000009687 ##22 MAST2 (ENSOMYG00000009424) ENSOMYG00000007606 POMGNT1 (ENSOMYG00000005992) prpf38a (ENSOMYG00000005627) mpl (ENSOMYG00000005603) tie1 (ENSOMYG00000005480) C1orf210 (ENSOMYG00000005222) ap1m3 (ENSOMYG00000004877) TMEM125 (ENSOMYG00000052670) CFAP57 (ENSOMYG00000004476) EBNA1BP2 (ENSOMYG00000004302) cfap144 (ENSOMYG00000004248) ENSOMYG00000004227 lrp8 (ENSOMYG00000004123) ENSOMYG00000003806 Northern pike DUPLICATION Northern pike MODERN SPECIES 7 pdcb (ENSELUG00000020131) ptgs2b (ENSELUG00000020167) PLA2G4A (ENSELUG00000020260) arpc5b (ENSELUG00000020292) ENSELUG00000031820 ENSELUG00000020034 ivns1abpa (ENSELUG00000020540) ENSELUG00000020565 TRMT1L (ENSELUG00000020587) niban1a (ENSELUG00000020647) kifap3a (ENSELUG00000020722) ntmt2 (ENSELUG00000020731) gorab (ENSELUG00000020749) prrx1b (ENSELUG00000020779) ENSELUG00000020809 ##22 ENSELUG00000020856 ##22 MAST2 (ENSELUG00000020906) ENSELUG00000020939 pomgnt1 (ENSELUG00000020997) ENSELUG00000034604 ENSELUG00000025395 prpf38a (ENSELUG00000025713) orc1 (ENSELUG00000021188) mpl (ENSELUG00000021218) tie1 (ENSELUG00000021380) ENSELUG00000033065 ap1m3 (ENSELUG00000021498) TMEM125 (ENSELUG00000021518) ENSELUG00000032419 ebna1bp2 (ENSELUG00000021634) cfap144 (ENSELUG00000021528) Northern pike MODERN SPECIES 7 ENSELUG00000034633 pdcb (ENSELUG00000020131) ptgs2b (ENSELUG00000020167) PLA2G4A (ENSELUG00000020260) arpc5b (ENSELUG00000020292) ENSELUG00000031820 ENSELUG00000020034 ivns1abpa (ENSELUG00000020540) ENSELUG00000020565 TRMT1L (ENSELUG00000020587) niban1a (ENSELUG00000020647) kifap3a (ENSELUG00000020722) ntmt2 (ENSELUG00000020731) gorab (ENSELUG00000020749) prrx1b (ENSELUG00000020779) ENSELUG00000020809 ##22 ENSELUG00000020856 ##22 MAST2 (ENSELUG00000020906) ENSELUG00000020939 pomgnt1 (ENSELUG00000020997) ENSELUG00000034604 ENSELUG00000025395 prpf38a (ENSELUG00000025713) orc1 (ENSELUG00000021188) mpl (ENSELUG00000021218) tie1 (ENSELUG00000021380) ENSELUG00000033065 ap1m3 (ENSELUG00000021498) TMEM125 (ENSELUG00000021518) ENSELUG00000032419 ebna1bp2 (ENSELUG00000021634) Otomorpha ANCESTRAL SPECIES 468 ENSGT00950000183102.B ENSGT00940000165656 ENSGT00530000063841.b.b ENSGT00940000154737.c.g ENSGT00940000164939.a.b ENSGT00940000159170.d ENSGT00940000165115.b ENSGT00940000153617.A.a.b ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000159284 Otophysi ANCESTRAL SPECIES 422 ENSGT00940000165115.b ENSGT00940000153617.A.a.b ENSGT00940000161210 ENSGT00950000183104.B.a.b.a.a.d ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000159284 Cyprinoidei ANCESTRAL SPECIES 266 ENSGT00940000165115.b ENSGT00940000153617.A.a.b ENSGT00940000161210 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000159284 Cyprininae ANCESTRAL SPECIES 547 ENSGT00390000009230.b.b ENSGT00510000049027.d.a ENSGT00940000153524.c ENSGT00940000165622.b.d ENSGT00390000007227.b.p ENSGT00390000000719 ENSGT00390000004097.a.f.a ENSGT00390000012198.b.f.b ENSGT00390000012198.b.f.a ENSGT00410000025695.a ENSGT00940000165115.b ENSGT00940000153617.A.a.b ENSGT00940000161210 ENSGT00940000163250.C.i.b ENSGT01100000263594 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000159284 Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 19 VCPIP1 (ENSCARG00000017241) trim55a (ENSCARG00000017258) mbd3a (ENSCARG00000017288) UQCR11 (ENSCARG00000017355) tcf3a (ENSCARG00000017386) ENSCARG00000017577 ONECUT3 (ENSCARG00000017584) ENSCARG00000017590 ENSCARG00000017598 ENSCARG00000017605 sf3a2 (ENSCARG00000017613) plekhj1 (ENSCARG00000017621) ISYNA1 (ENSCARG00000017641) ENSCARG00000003888 ENSCARG00000003904 ENSCARG00000003923 ##22 ENSCARG00000003954 FEM1A (ENSCARG00000003965) PTPRS (ENSCARG00000004135) SUGP1 (ENSCARG00000004806) MAU2 (ENSCARG00000004820) cirbpa (ENSCARG00000004858) ENSCARG00000004872 ENSCARG00000004875 CBARP (ENSCARG00000004889) stk11 (ENSCARG00000004911) PTPRM (ENSCARG00000005097) ENSCARG00000007057 ENSCARG00000007061 ENSCARG00000007069 ENSCARG00000007076 Goldfish MODERN SPECIES 3388 ENSCARG00000050012 ##22 Goldfish MODERN SPECIES 11 ENSCARG00000040473 admp (ENSCARG00000040664) pnhd (ENSCARG00000040685) ENSCARG00000040695 ENSCARG00000040719 ENSCARG00000040961 upf1 (ENSCARG00000041022) pgpep1 (ENSCARG00000041182) jund (ENSCARG00000041219) pnp5b (ENSCARG00000041228) NCSTN (ENSCARG00000041254) fcer1gl (ENSCARG00000041767) FEM1A (ENSCARG00000041785) FEM1A (ENSCARG00000041813) ENSCARG00000041823 ENSCARG00000041828 ##22 ENSCARG00000041857 stk11 (ENSCARG00000041875) ENSCARG00000041894 ENSCARG00000041925 PTPRS (ENSCARG00000042166) ENSCARG00000049742 MAU2 (ENSCARG00000000206) ENSCARG00000000256 NDUFA13 (ENSCARG00000000265) YJEFN3 (ENSCARG00000000273) cirbpa (ENSCARG00000000293) ENSCARG00000000305 ENSCARG00000000315 ENSCARG00000000364 ENSCARG00000000398 Cyprininae_a ANCESTRAL SPECIES 613 ENSGT00390000012198.b.f.a ENSGT00410000025695.a ENSGT00940000165115.b ENSGT00940000153617.A.a.b ENSGT00940000161210 ENSGT00940000163250.C.i.b ENSGT01100000263594 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000159284 Golden-line barbel MODERN SPECIES 1307 MAU2 (ENSSGRG00000013766) ENSSGRG00000013765 ENSSGRG00000013495 FEM1A (ENSSGRG00000013494) ENSSGRG00000013493 ##22 ENSSGRG00000013487 Characiphysae ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.a ##22 Characiphysae_b ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.a ##22 Electric eel MODERN SPECIES 250 cbr4 (ENSEEEG00000005123) TRMT1L (ENSEEEG00000005125) niban1a (ENSEEEG00000005136) kifap3a (ENSEEEG00000005154) ntmt2 (ENSEEEG00000005199) gorab (ENSEEEG00000005215) prrx1b (ENSEEEG00000005218) ENSEEEG00000005222 ##22 slc25a24 (ENSEEEG00000005231) elp3 (ENSEEEG00000005247) si:ch211-63o20.7 (ENSEEEG00000005417) pnocb (ENSEEEG00000005418) znf395b (ENSEEEG00000005419) paqr8 (ENSEEEG00000005421) mcm3 (ENSEEEG00000005426) il17a/f3 (ENSEEEG00000005440) stmn4 (ENSEEEG00000005443) emilin1a (ENSEEEG00000005444) ankef1a (ENSEEEG00000005449) snap25a (ENSEEEG00000005459) ENSEEEG00000005526 hnrnpub (ENSEEEG00000005540) lft1 (ENSEEEG00000005622) Clupeocephala ANCESTRAL SPECIES 1089 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.b.a.b ##22 Otomorpha ANCESTRAL SPECIES 814 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 Clupeiformes ANCESTRAL SPECIES 335 ENSGT00950000183102.B ENSGT00940000165656 ENSGT00530000063841.b.b ENSGT00940000154737.c.g ENSGT00940000164939.a.b ENSGT01040000240444.A.b.a.b ENSGT00940000159170.d ENSGT00940000155854.a.b ENSGT00940000165115.b ENSGT00940000153617.A.a.b ENSGT00940000161210 ENSGT00950000183104.B.a.b.a.a.d ENSGT00940000163250.C ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 Atlantic herring MODERN SPECIES 14 MMP1 (ENSCHAG00000020846) ENSCHAG00000021103 cactin (ENSCHAG00000021108) sema4e (ENSCHAG00000021141) stap2a (ENSCHAG00000021258) sh3gl1a (ENSCHAG00000021296) rorcb (ENSCHAG00000021312) ENSCHAG00000021447 SEMA6B (ENSCHAG00000021456) abhd17aa (ENSCHAG00000002485) PTPRS (ENSCHAG00000003624) ENSCHAG00000019222 FEM1A (ENSCHAG00000019234) fzr1a (ENSCHAG00000019246) ENSCHAG00000019483 ENSCHAG00000019489 ##22 ENSCHAG00000019514 ##22 PRKAB2 (ENSCHAG00000019528) FUT9 (ENSCHAG00000019551) ENSCHAG00000019883 ENSCHAG00000026841 grhprb (ENSCHAG00000026844) ENSCHAG00000026853 polr1e (ENSCHAG00000026854) FBXO10 (ENSCHAG00000026857) ENSCHAG00000026870 chrnb3a (ENSCHAG00000026893) chrna6 (ENSCHAG00000026897) ENSCHAG00000026899 ENSCHAG00000026908 ENSCHAG00000026912 Denticle herring MODERN SPECIES 14 PTPRM (ENSDCDG00000035237) ENSDCDG00000035611 cactin (ENSDCDG00000035615) ENSDCDG00000035621 stap2a (ENSDCDG00000000183) sh3gl1a (ENSDCDG00000000204) rorcb (ENSDCDG00000000364) ENSDCDG00000000447 SEMA6B (ENSDCDG00000000459) abhd17aa (ENSDCDG00000000479) ENSDCDG00000000502 PTPRS (ENSDCDG00000001350) FEM1A (ENSDCDG00000020218) ENSDCDG00000020225 ENSDCDG00000020277 ENSDCDG00000020281 ##22 ENSDCDG00000020282 ##22 ENSDCDG00000020284 ##22 PRKAB2 (ENSDCDG00000020287) ENSDCDG00000020289 CTXN1 (ENSDCDG00000020291) TIMM44 (ENSDCDG00000020293) rab11bb (ENSDCDG00000020298) PIP5K1C (ENSDCDG00000020330) gpx4b (ENSDCDG00000021692) polr2eb (ENSDCDG00000021709) ARHGAP45 (ENSDCDG00000021926) sbno2a (ENSDCDG00000021954) tm6sf2a (ENSDCDG00000021974) ENSDCDG00000021977 slc25a42 (ENSDCDG00000022012) Otophysi ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Characiphysae ANCESTRAL SPECIES 215 ENSGT00940000165115.b ENSGT00940000153617.A.a.b.a ENSGT00940000161210 ENSGT00950000183104.B.a.b.a.a.d ENSGT00940000163250.C ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 Characiphysae_b ANCESTRAL SPECIES 201 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00950000183102.B ENSGT00940000165656 ENSGT00530000063841.b.b ENSGT00940000154737.c.g ENSGT00940000164939.a.b ENSGT01040000240444.A.b.a.b ENSGT00940000159170.d ENSGT00940000155854.a.b ENSGT00940000164811.a.b.b ENSGT00940000164927.b ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b Characoidei ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Red-bellied piranha MODERN SPECIES 129 cul1a (ENSPNAG00000002328) mcm6l (ENSPNAG00000012562) ahrrb (ENSPNAG00000002270) exoc3 (ENSPNAG00000012484) ENSPNAG00000012445 si:ch211-106n13.3 (ENSPNAG00000012413) ENSPNAG00000012392 ccr12a (ENSPNAG00000012372) hecw1b (ENSPNAG00000002216) ENSPNAG00000002175 ENSPNAG00000002174 PTPRS (ENSPNAG00000012230) FEM1A (ENSPNAG00000012160) ENSPNAG00000012153 ENSPNAG00000002100 ENSPNAG00000012093 ##22 ENSPNAG00000005871 PRKAB2 (ENSPNAG00000012056) cactin (ENSPNAG00000012038) sema4e (ENSPNAG00000012017) stap2a (ENSPNAG00000011939) sh3gl1a (ENSPNAG00000011902) rorcb (ENSPNAG00000011877) ENSPNAG00000001955 SEMA6B (ENSPNAG00000011815) abhd17aa (ENSPNAG00000001934) cdc34b (ENSPNAG00000011781) ENSPNAG00000011762 KCNJ9 (ENSPNAG00000011738) ENSPNAG00000011702 SVIL (ENSPNAG00000001871) Electric eel MODERN SPECIES 1103 ENSEEEG00000003711 ENSEEEG00000003707 ##22 ENSEEEG00000003705 ##22 PRKAB2 (ENSEEEG00000003694) cactin (ENSEEEG00000003687) sema4e (ENSEEEG00000003685) Euteleosteomorpha ANCESTRAL SPECIES 64 ENSGT00950000183104.B.a.b.a.a ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Pinecone sodierfish DUPLICATION Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 8 stk11 (ENSMMDG00005002884) ENSMMDG00005002898 ENSMMDG00005002904 ENSMMDG00005002926 ENSMMDG00005003168 NDUFA13 (ENSMMDG00005003172) GATAD2A (ENSMMDG00005003177) MAU2 (ENSMMDG00005003240) ARMC6 (ENSMMDG00005003707) SLC25A42 (ENSMMDG00005003719) ENSMMDG00005003736 ENSMMDG00005003744 tm6sf2a (ENSMMDG00005003756) ENSMMDG00005003769 ##22 ENSMMDG00005003773 ##22 ENSMMDG00005003779 ##22 PRKAB2 (ENSMMDG00005003785) ENSMMDG00005003812 eeig2a (ENSMMDG00005003984) ENSMMDG00005003993 ENSMMDG00005004004 ENSMMDG00005004012 ENSMMDG00005004038 WDR47 (ENSMMDG00005004142) CAMSAP2 (ENSMMDG00005004320) ticam1 (ENSMMDG00005004339) ENSMMDG00005004360 ENSMMDG00005004377 CAPN10 (ENSMMDG00005004403) eif4e2 (ENSMMDG00005004433) ENSMMDG00005004650 Pinecone sodierfish MODERN SPECIES 8 rnf126 (ENSMMDG00005002837) SUGP1 (ENSMMDG00005002857) stk11 (ENSMMDG00005002884) ENSMMDG00005002898 ENSMMDG00005002904 ENSMMDG00005002926 ENSMMDG00005003168 NDUFA13 (ENSMMDG00005003172) GATAD2A (ENSMMDG00005003177) MAU2 (ENSMMDG00005003240) ARMC6 (ENSMMDG00005003707) SLC25A42 (ENSMMDG00005003719) ENSMMDG00005003736 ENSMMDG00005003744 tm6sf2a (ENSMMDG00005003756) ENSMMDG00005003769 ##22 ENSMMDG00005003773 ##22 ENSMMDG00005003779 ##22 PRKAB2 (ENSMMDG00005003785) ENSMMDG00005003812 eeig2a (ENSMMDG00005003984) ENSMMDG00005003993 ENSMMDG00005004004 ENSMMDG00005004012 ENSMMDG00005004038 WDR47 (ENSMMDG00005004142) CAMSAP2 (ENSMMDG00005004320) ticam1 (ENSMMDG00005004339) ENSMMDG00005004360 ENSMMDG00005004377 CAPN10 (ENSMMDG00005004403) Pinecone sodierfish MODERN SPECIES 8 SUGP1 (ENSMMDG00005002857) stk11 (ENSMMDG00005002884) ENSMMDG00005002898 ENSMMDG00005002904 ENSMMDG00005002926 ENSMMDG00005003168 NDUFA13 (ENSMMDG00005003172) GATAD2A (ENSMMDG00005003177) MAU2 (ENSMMDG00005003240) ARMC6 (ENSMMDG00005003707) SLC25A42 (ENSMMDG00005003719) ENSMMDG00005003736 ENSMMDG00005003744 tm6sf2a (ENSMMDG00005003756) ENSMMDG00005003769 ##22 ENSMMDG00005003773 ##22 ENSMMDG00005003779 ##22 PRKAB2 (ENSMMDG00005003785) ENSMMDG00005003812 eeig2a (ENSMMDG00005003984) ENSMMDG00005003993 ENSMMDG00005004004 ENSMMDG00005004012 ENSMMDG00005004038 WDR47 (ENSMMDG00005004142) CAMSAP2 (ENSMMDG00005004320) ticam1 (ENSMMDG00005004339) ENSMMDG00005004360 ENSMMDG00005004377 CAPN10 (ENSMMDG00005004403) eif4e2 (ENSMMDG00005004433) Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.B ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m Eupercaria ANCESTRAL SPECIES 22 ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Tetraodontidae ANCESTRAL SPECIES 13 ENSGT00950000183104.B.a.b.a.a ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT01070000253760.b.a.a.a.b.d.a.b.b Tetraodon MODERN SPECIES 6 plekhj1 (ENSTNIG00000015317) fzr1a (ENSTNIG00000015316) ENSTNIG00000015315 ENSTNIG00000015314 rnf126 (ENSTNIG00000015313) SUGP1 (ENSTNIG00000015312) stk11 (ENSTNIG00000015311) CBARP (ENSTNIG00000015310) cirbpa (ENSTNIG00000000450) NDUFA13 (ENSTNIG00000015309) GATAD2A (ENSTNIG00000015308) ARMC6 (ENSTNIG00000015307) SLC25A42 (ENSTNIG00000015306) ENSTNIG00000015305 tm6sf2a (ENSTNIG00000015304) ENSTNIG00000015303 ##22 PRKAB2 (ENSTNIG00000015302) ENSTNIG00000015301 eeig2a (ENSTNIG00000015300) ENSTNIG00000015299 FNDC7 (ENSTNIG00000015298) ENSTNIG00000015297 WDR47 (ENSTNIG00000015296) CAMSAP2 (ENSTNIG00000015295) ticam1 (ENSTNIG00000001099) ENSTNIG00000003852 CAPN10 (ENSTNIG00000015294) ENSTNIG00000015293 chrng (ENSTNIG00000015292) ENSTNIG00000015291 ENSTNIG00000015290 Fugu MODERN SPECIES 14 fzr1a (ENSTRUG00000009166) ENSTRUG00000025344 ENSTRUG00000009472 rnf126 (ENSTRUG00000009560) SUGP1 (ENSTRUG00000009724) stk11 (ENSTRUG00000009891) ENSTRUG00000010019 ENSTRUG00000010069 cirbp (ENSTRUG00000010187) NDUFA13 (ENSTRUG00000031395) ENSTRUG00000010208 ARMC6 (ENSTRUG00000010295) SLC25A42 (ENSTRUG00000010352) ENSTRUG00000010430 tm6sf2a (ENSTRUG00000010612) ENSTRUG00000023574 ##22 ENSTRUG00000029868 ##22 ENSTRUG00000010846 ##22 PRKAB2 (ENSTRUG00000023478) ENSTRUG00000011259 eeig2a (ENSTRUG00000011642) ENSTRUG00000011765 ENSTRUG00000033150 ENSTRUG00000032528 FNDC7 (ENSTRUG00000014913) ENSTRUG00000031126 ENSTRUG00000014852 WDR47 (ENSTRUG00000014812) CAMSAP2 (ENSTRUG00000014682) ticam (ENSTRUG00000014679) ENSTRUG00000033431 Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.e ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Eupecaria_C ANCESTRAL SPECIES 10 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 Gilthead seabream MODERN SPECIES 13 ENSSAUG00010017855 ENSSAUG00010017804 rnf126 (ENSSAUG00010017802) SUGP1 (ENSSAUG00010017796) stk11 (ENSSAUG00010017794) ENSSAUG00010017793 ENSSAUG00010017792 cirbpa (ENSSAUG00010017789) NDUFA13 (ENSSAUG00010017787) ENSSAUG00010017786 MAU2 (ENSSAUG00010017124) ARMC6 (ENSSAUG00010017108) SLC25A42 (ENSSAUG00010017105) ENSSAUG00010017099 tm6sf2a (ENSSAUG00010017095) ENSSAUG00010017087 ##22 PRKAB2 (ENSSAUG00010017078) ENSSAUG00010017028 eeig2a (ENSSAUG00010017023) ENSSAUG00010017022 ENSSAUG00010017021 ENSSAUG00010017020 FNDC7 (ENSSAUG00010017017) ENSSAUG00010017015 ENSSAUG00010017008 WDR47 (ENSSAUG00010016988) CAMSAP2 (ENSSAUG00010016981) ENSSAUG00010016976 ENSSAUG00010016973 ENSSAUG00010016972 CAPN10 (ENSSAUG00010016851) Eupercaria_incertae_sedis ANCESTRAL SPECIES 8 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00940000169454 ENSGT00390000004674.j ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 ENSGT00940000154694 Large yellow croaker MODERN SPECIES 483 ENSLCRG00005006138 ENSLCRG00005006049 ENSLCRG00005006038 SUGP1 (ENSLCRG00005006036) stk11 (ENSLCRG00005006034) ENSLCRG00005006032 ENSLCRG00005006026 cirbpa (ENSLCRG00005006025) NDUFA13 (ENSLCRG00005006023) ENSLCRG00005006021 MAU2 (ENSLCRG00005006019) ARMC6 (ENSLCRG00005006018) SLC25A42 (ENSLCRG00005006016) ENSLCRG00005006013 tm6sf2a (ENSLCRG00005006010) ENSLCRG00005006008 ##22 PRKAB2 (ENSLCRG00005006005) ENSLCRG00005005985 eeig2a (ENSLCRG00005005979) prpf38b (ENSLCRG00005005975) ENSLCRG00005005973 ENSLCRG00005005971 ENSLCRG00005005969 ENSLCRG00005005965 ENSLCRG00005005243 CAMSAP2 (ENSLCRG00005005228) WDR47 (ENSLCRG00005005184) ENSLCRG00005005173 ENSLCRG00005005172 ENSLCRG00005005167 CAPN10 (ENSLCRG00005005119) European seabass MODERN SPECIES sf3a2 (ENSDLAG00005024886) ENSDLAG00005024891 ENSDLAG00005024905 ENSDLAG00005024908 ENSDLAG00005024934 ENSDLAG00005024937 ENSDLAG00005033484 ENSDLAG00005024964 ENSDLAG00005030125 NDUFA13 (ENSDLAG00005026360) ENSDLAG00005024979 MAU2 (ENSDLAG00005025001) ENSDLAG00005025106 ENSDLAG00005025115 ENSDLAG00005034749 ENSDLAG00005025119 ##22 ENSDLAG00005031899 eeig2a (ENSDLAG00005025216) prpf38b (ENSDLAG00005025221) ENSDLAG00005000160 ENSDLAG00005025227 ENSDLAG00005025229 ENSDLAG00005025234 ENSDLAG00005000077 ENSDLAG00005000111 ENSDLAG00005000222 ENSDLAG00005000231 ENSDLAG00005000250 eif4e2 (ENSDLAG00005000271) ENSDLAG00005000281 chrng (ENSDLAG00005000305) Perciformes ANCESTRAL SPECIES 5 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.e.a.a ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000177587 ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 Perciformes_a ANCESTRAL SPECIES 17 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.e.b ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000177587 ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 ENSGT00940000154694 Channel bull blenny DUPLICATION Channel bull blenny DUPLICATION Channel bull blenny MODERN SPECIES 8 ENSCGOG00000011788 ENSCGOG00000011782 rnf126 (ENSCGOG00000011710) SUGP1 (ENSCGOG00000011646) stk11 (ENSCGOG00000011588) ENSCGOG00000011587 ENSCGOG00000011585 cirbpa (ENSCGOG00000011580) NDUFA13 (ENSCGOG00000011572) ENSCGOG00000011569 ARMC6 (ENSCGOG00000011565) SLC25A42 (ENSCGOG00000011556) ENSCGOG00000011544 tm6sf2a (ENSCGOG00000011535) ENSCGOG00000011532 ##22 ENSCGOG00000011528 ##22 ENSCGOG00000011527 ##22 PRKAB2 (ENSCGOG00000011491) ENSCGOG00000010953 eeig2a (ENSCGOG00000010934) ENSCGOG00000010927 ENSCGOG00000010923 ENSCGOG00000010919 ENSCGOG00000010912 ENSCGOG00000010904 WDR47 (ENSCGOG00000010600) CAMSAP2 (ENSCGOG00000010375) ENSCGOG00000010368 ENSCGOG00000010356 CAPN10 (ENSCGOG00000010116) eif4e2 (ENSCGOG00000010109) Channel bull blenny MODERN SPECIES 8 ENSCGOG00000011782 rnf126 (ENSCGOG00000011710) SUGP1 (ENSCGOG00000011646) stk11 (ENSCGOG00000011588) ENSCGOG00000011587 ENSCGOG00000011585 cirbpa (ENSCGOG00000011580) NDUFA13 (ENSCGOG00000011572) ENSCGOG00000011569 ARMC6 (ENSCGOG00000011565) SLC25A42 (ENSCGOG00000011556) ENSCGOG00000011544 tm6sf2a (ENSCGOG00000011535) ENSCGOG00000011532 ##22 ENSCGOG00000011528 ##22 ENSCGOG00000011527 ##22 PRKAB2 (ENSCGOG00000011491) ENSCGOG00000010953 eeig2a (ENSCGOG00000010934) ENSCGOG00000010927 ENSCGOG00000010923 ENSCGOG00000010919 ENSCGOG00000010912 ENSCGOG00000010904 WDR47 (ENSCGOG00000010600) CAMSAP2 (ENSCGOG00000010375) ENSCGOG00000010368 ENSCGOG00000010356 CAPN10 (ENSCGOG00000010116) eif4e2 (ENSCGOG00000010109) ENSCGOG00000010105 Channel bull blenny MODERN SPECIES 8 fzr1a (ENSCGOG00000011798) ENSCGOG00000011788 ENSCGOG00000011782 rnf126 (ENSCGOG00000011710) SUGP1 (ENSCGOG00000011646) stk11 (ENSCGOG00000011588) ENSCGOG00000011587 ENSCGOG00000011585 cirbpa (ENSCGOG00000011580) NDUFA13 (ENSCGOG00000011572) ENSCGOG00000011569 ARMC6 (ENSCGOG00000011565) SLC25A42 (ENSCGOG00000011556) ENSCGOG00000011544 tm6sf2a (ENSCGOG00000011535) ENSCGOG00000011532 ##22 ENSCGOG00000011528 ##22 ENSCGOG00000011527 ##22 PRKAB2 (ENSCGOG00000011491) ENSCGOG00000010953 eeig2a (ENSCGOG00000010934) ENSCGOG00000010927 ENSCGOG00000010923 ENSCGOG00000010919 ENSCGOG00000010912 ENSCGOG00000010904 WDR47 (ENSCGOG00000010600) CAMSAP2 (ENSCGOG00000010375) ENSCGOG00000010368 ENSCGOG00000010356 CAPN10 (ENSCGOG00000010116) Pike perch DUPLICATION Pike perch MODERN SPECIES 55 ENSSLUG00000002883 ENSSLUG00000002863 rnf126 (ENSSLUG00000002851) SUGP1 (ENSSLUG00000002833) stk11 (ENSSLUG00000002824) ENSSLUG00000002816 ENSSLUG00000002806 ENSSLUG00000002796 NDUFA13 (ENSSLUG00000002790) ENSSLUG00000002750 MAU2 (ENSSLUG00000002586) ARMC6 (ENSSLUG00000002542) SLC25A42 (ENSSLUG00000002534) ENSSLUG00000002517 tm6sf2a (ENSSLUG00000002494) ENSSLUG00000002486 ##22 ENSSLUG00000002482 ##22 PRKAB2 (ENSSLUG00000002467) ENSSLUG00000002365 eeig2a (ENSSLUG00000002347) ENSSLUG00000002343 prpf38b (ENSSLUG00000002339) FNDC7 (ENSSLUG00000002320) ENSSLUG00000002267 WDR47 (ENSSLUG00000002196) CAMSAP2 (ENSSLUG00000002176) ENSSLUG00000002175 ENSSLUG00000002160 ENSSLUG00000002145 CAPN10 (ENSSLUG00000002030) eif4e2 (ENSSLUG00000001984) Pike perch MODERN SPECIES 55 ENSSLUG00000002863 rnf126 (ENSSLUG00000002851) SUGP1 (ENSSLUG00000002833) stk11 (ENSSLUG00000002824) ENSSLUG00000002816 ENSSLUG00000002806 ENSSLUG00000002796 NDUFA13 (ENSSLUG00000002790) ENSSLUG00000002750 MAU2 (ENSSLUG00000002586) ARMC6 (ENSSLUG00000002542) SLC25A42 (ENSSLUG00000002534) ENSSLUG00000002517 tm6sf2a (ENSSLUG00000002494) ENSSLUG00000002486 ##22 ENSSLUG00000002482 ##22 PRKAB2 (ENSSLUG00000002467) ENSSLUG00000002365 eeig2a (ENSSLUG00000002347) ENSSLUG00000002343 prpf38b (ENSSLUG00000002339) FNDC7 (ENSSLUG00000002320) ENSSLUG00000002267 WDR47 (ENSSLUG00000002196) CAMSAP2 (ENSSLUG00000002176) ENSSLUG00000002175 ENSSLUG00000002160 ENSSLUG00000002145 CAPN10 (ENSSLUG00000002030) eif4e2 (ENSSLUG00000001984) ENSSLUG00000001969 Cottioidei ANCESTRAL SPECIES 15 ENSGT00950000183104.B.a.b.a.a ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.e.a.a ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00980000198596.C ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 ENSGT00940000154694 Lumpfish DUPLICATION Lumpfish MODERN SPECIES 8 ENSCLMG00005006443 ENSCLMG00005006441 RNF126 (ENSCLMG00005006440) SUGP1 (ENSCLMG00005006439) stk11 (ENSCLMG00005006438) CBARP (ENSCLMG00005006437) ENSCLMG00005006436 ENSCLMG00005006435 NDUFA13 (ENSCLMG00005006434) ENSCLMG00005006433 ARMC6 (ENSCLMG00005006432) SLC25A42 (ENSCLMG00005006431) ENSCLMG00005006428 tm6sf2a (ENSCLMG00005006427) ENSCLMG00005006425 ##22 ENSCLMG00005006424 ##22 PRKAB2 (ENSCLMG00005006423) ENSCLMG00005006402 eeig2a (ENSCLMG00005006397) ENSCLMG00005006394 ENSCLMG00005006389 ENSCLMG00005006382 ENSCLMG00005006381 ENSCLMG00005006378 ENSCLMG00005006377 CAPN10 (ENSCLMG00005006351) eif4e2 (ENSCLMG00005006325) ENSCLMG00005006321 chrng (ENSCLMG00005006307) ENSCLMG00005006305 ENSCLMG00005006303 Lumpfish MODERN SPECIES 8 ENSCLMG00005006444 ENSCLMG00005006443 ENSCLMG00005006441 RNF126 (ENSCLMG00005006440) SUGP1 (ENSCLMG00005006439) stk11 (ENSCLMG00005006438) CBARP (ENSCLMG00005006437) ENSCLMG00005006436 ENSCLMG00005006435 NDUFA13 (ENSCLMG00005006434) ENSCLMG00005006433 ARMC6 (ENSCLMG00005006432) SLC25A42 (ENSCLMG00005006431) ENSCLMG00005006428 tm6sf2a (ENSCLMG00005006427) ENSCLMG00005006425 ##22 ENSCLMG00005006424 ##22 PRKAB2 (ENSCLMG00005006423) ENSCLMG00005006402 eeig2a (ENSCLMG00005006397) ENSCLMG00005006394 ENSCLMG00005006389 ENSCLMG00005006382 ENSCLMG00005006381 ENSCLMG00005006378 ENSCLMG00005006377 CAPN10 (ENSCLMG00005006351) eif4e2 (ENSCLMG00005006325) ENSCLMG00005006321 chrng (ENSCLMG00005006307) ENSCLMG00005006305 Stickleback MODERN SPECIES 2 fzr1a (ENSGACG00000015236) ENSGACG00000015231 ENSGACG00000015230 rnf126 (ENSGACG00000015225) SUGP1 (ENSGACG00000015222) stk11 (ENSGACG00000015219) ENSGACG00000015211 cirbpa (ENSGACG00000015206) NDUFA13 (ENSGACG00000015203) GATAD2A (ENSGACG00000015199) ARMC6 (ENSGACG00000015191) SLC25A42 (ENSGACG00000015189) ENSGACG00000015182 tm6sf2a (ENSGACG00000015175) ENSGACG00000015171 ENSGACG00000015168 ##22 PRKAB2 (ENSGACG00000015165) ENSGACG00000015163 eeig2a (ENSGACG00000015158) prpf38b (ENSGACG00000015154) ENSGACG00000015153 ENSGACG00000015150 FNDC7 (ENSGACG00000015145) ENSGACG00000015136 WDR47 (ENSGACG00000015130) CAMSAP2 (ENSGACG00000015109) ENSGACG00000015108 CAPN10 (ENSGACG00000015101) eif4e2 (ENSGACG00000015090) ENSGACG00000015088 chrng (ENSGACG00000015082) Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Carangaria ANCESTRAL SPECIES 5 ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 Turbot MODERN SPECIES 19 ENSSMAG00000002573 ENSSMAG00000031477 ENSSMAG00000002539 ENSSMAG00000002519 ENSSMAG00000002495 ENSSMAG00000002464 ENSSMAG00000002450 ENSSMAG00000002439 ENSSMAG00000002412 ENSSMAG00000002373 ENSSMAG00000002301 ENSSMAG00000002268 ENSSMAG00000034798 ENSSMAG00000002220 ENSSMAG00000002195 ENSSMAG00000001960 ##22 ENSSMAG00000001888 ENSSMAG00000001862 eeig2a (ENSSMAG00000001814) ENSSMAG00000001781 prpf38b (ENSSMAG00000001776) ENSSMAG00000035900 ENSSMAG00000023482 ENSSMAG00000001716 ENSSMAG00000001709 ENSSMAG00000001681 ENSSMAG00000001614 ENSSMAG00000001542 ENSSMAG00000001531 ENSSMAG00000037126 ENSSMAG00000001522 Carangaria_A ANCESTRAL SPECIES 2 ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 Barramundi perch MODERN SPECIES 69 ENSLCAG00010016259 rnf126 (ENSLCAG00010016255) SUGP1 (ENSLCAG00010016250) stk11 (ENSLCAG00010016248) ENSLCAG00010016246 ENSLCAG00010016241 cirbpa (ENSLCAG00010016235) NDUFA13 (ENSLCAG00010016224) GATAD2A (ENSLCAG00010016218) ENSLCAG00010016216 MAU2 (ENSLCAG00010016175) ARMC6 (ENSLCAG00010016141) SLC25A42 (ENSLCAG00010016133) ENSLCAG00010016074 tm6sf2a (ENSLCAG00010016045) ENSLCAG00010016017 ##22 PRKAB2 (ENSLCAG00010016009) ENSLCAG00010016001 eeig2a (ENSLCAG00010016000) ENSLCAG00010015995 ENSLCAG00010015990 ENSLCAG00010015987 ENSLCAG00010015979 ENSLCAG00010015962 WDR47 (ENSLCAG00010015940) CAMSAP2 (ENSLCAG00010015934) ENSLCAG00010015930 ENSLCAG00010015926 ENSLCAG00010015924 ENSLCAG00010015903 CAPN10 (ENSLCAG00010015890) Seriola ANCESTRAL SPECIES ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 2718 ENSSLDG00000023679 tm6sf2a (ENSSLDG00000023660) ENSSLDG00000023656 ENSSLDG00000023611 ##22 ENSSLDG00000023596 ##22 PRKAB2 (ENSSLDG00000023583) ENSSLDG00000023551 eeig2a (ENSSLDG00000023525) ENSSLDG00000023487 ENSSLDG00000023419 FNDC7 (ENSSLDG00000023394) ENSSLDG00000023382 ENSSLDG00000023357 WDR47 (ENSSLDG00000023321) CAMSAP2 (ENSSLDG00000023313) ticam1 (ENSSLDG00000023309) ENSSLDG00000023294 ENSSLDG00000023287 CAPN10 (ENSSLDG00000023280) Yellowtail amberjack MODERN SPECIES 2718 ENSSLDG00000023679 tm6sf2a (ENSSLDG00000023660) ENSSLDG00000023656 ENSSLDG00000023611 ##22 ENSSLDG00000023596 ##22 PRKAB2 (ENSSLDG00000023583) ENSSLDG00000023551 eeig2a (ENSSLDG00000023525) ENSSLDG00000023487 ENSSLDG00000023419 FNDC7 (ENSSLDG00000023394) ENSSLDG00000023382 ENSSLDG00000023357 WDR47 (ENSSLDG00000023321) CAMSAP2 (ENSSLDG00000023313) ticam1 (ENSSLDG00000023309) ENSSLDG00000023294 ENSSLDG00000023287 CAPN10 (ENSSLDG00000023280) eif4e2 (ENSSLDG00000023267) Anabantaria ANCESTRAL SPECIES 8 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 ENSGT00940000154694 Zig-zag eel DUPLICATION Zig-zag eel MODERN SPECIES 8 ENSMAMG00000009954 ENSMAMG00000009996 ENSMAMG00000010022 ENSMAMG00000010087 ENSMAMG00000010112 ENSMAMG00000010150 ENSMAMG00000010168 NDUFA13 (ENSMAMG00000010191) ENSMAMG00000010196 MAU2 (ENSMAMG00000010226) ENSMAMG00000010309 ENSMAMG00000025704 ENSMAMG00000010386 ENSMAMG00000010423 ENSMAMG00000010517 ##22 ENSMAMG00000010535 ##22 ENSMAMG00000010575 ENSMAMG00000010596 eeig2a (ENSMAMG00000010629) prpf38b (ENSMAMG00000010641) ENSMAMG00000010705 ENSMAMG00000010720 ENSMAMG00000010724 ENSMAMG00000010748 ENSMAMG00000010789 ENSMAMG00000010796 ENSMAMG00000010801 ENSMAMG00000010811 ENSMAMG00000010866 eif4e2 (ENSMAMG00000010881) ENSMAMG00000010918 Zig-zag eel MODERN SPECIES 8 ENSMAMG00000009939 ENSMAMG00000009954 ENSMAMG00000009996 ENSMAMG00000010022 ENSMAMG00000010087 ENSMAMG00000010112 ENSMAMG00000010150 ENSMAMG00000010168 NDUFA13 (ENSMAMG00000010191) ENSMAMG00000010196 MAU2 (ENSMAMG00000010226) ENSMAMG00000010309 ENSMAMG00000025704 ENSMAMG00000010386 ENSMAMG00000010423 ENSMAMG00000010517 ##22 ENSMAMG00000010535 ##22 ENSMAMG00000010575 ENSMAMG00000010596 eeig2a (ENSMAMG00000010629) prpf38b (ENSMAMG00000010641) ENSMAMG00000010705 ENSMAMG00000010720 ENSMAMG00000010724 ENSMAMG00000010748 ENSMAMG00000010789 ENSMAMG00000010796 ENSMAMG00000010801 ENSMAMG00000010811 ENSMAMG00000010866 eif4e2 (ENSMAMG00000010881) Anabantoidei ANCESTRAL SPECIES 18 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 ENSGT00940000154694 Siamese fighting fish MODERN SPECIES 8 ENSBSLG00000014410 dab1b (ENSBSLG00000014796) c8b (ENSBSLG00000014847) C8A (ENSBSLG00000015040) ENSBSLG00000015162 PLPP3 (ENSBSLG00000015211) ENSBSLG00000015242 cirbpa (ENSBSLG00000015274) NDUFA13 (ENSBSLG00000015368) GATAD2A (ENSBSLG00000015403) MAU2 (ENSBSLG00000015435) ARMC6 (ENSBSLG00000016599) SLC25A42 (ENSBSLG00000016665) ENSBSLG00000016783 tm6sf2a (ENSBSLG00000017014) ENSBSLG00000017114 ##22 PRKAB2 (ENSBSLG00000017381) ENSBSLG00000017453 eeig2a (ENSBSLG00000018184) ENSBSLG00000018238 ENSBSLG00000018277 ENSBSLG00000018330 FNDC7 (ENSBSLG00000018344) ENSBSLG00000018415 ENSBSLG00000018443 WDR47 (ENSBSLG00000018798) CAMSAP2 (ENSBSLG00000018969) ENSBSLG00000019091 ENSBSLG00000019104 ENSBSLG00000019114 CAPN10 (ENSBSLG00000019158) Climbing perch MODERN SPECIES 8 ENSATEG00000015205 ENSATEG00000015159 ENSATEG00000015089 ENSATEG00000015056 ENSATEG00000027548 ENSATEG00000015018 ENSATEG00000026515 NDUFA13 (ENSATEG00000014957) ENSATEG00000014918 MAU2 (ENSATEG00000014807) ENSATEG00000014769 ENSATEG00000014746 ENSATEG00000014719 ENSATEG00000027036 ENSATEG00000014645 ENSATEG00000014584 ##22 ENSATEG00000014553 ENSATEG00000014532 eeig2a (ENSATEG00000014496) ENSATEG00000014482 ENSATEG00000014471 ENSATEG00000026802 ENSATEG00000014423 ENSATEG00000029889 ENSATEG00000014349 ENSATEG00000014307 ENSATEG00000014253 ENSATEG00000026404 ENSATEG00000014191 ENSATEG00000014177 ENSATEG00000014151 Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.B ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00940000169454 ENSGT00390000004674.j ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000177587 ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 Cichlidae ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 P. nyererei MODERN SPECIES 299 ENSPNYG00000007047 ENSPNYG00000007066 stk11 (ENSPNYG00000007076) ENSPNYG00000007161 ENSPNYG00000007184 ENSPNYG00000007198 NDUFA13 (ENSPNYG00000007213) ENSPNYG00000007222 MAU2 (ENSPNYG00000007240) ARMC6 (ENSPNYG00000007304) SLC25A42 (ENSPNYG00000007327) ENSPNYG00000007386 ENSPNYG00000007405 tm6sf2a (ENSPNYG00000007438) ENSPNYG00000007452 ENSPNYG00000007470 ##22 PRKAB2 (ENSPNYG00000007553) ENSPNYG00000007577 eeig2a (ENSPNYG00000007608) prpf38b (ENSPNYG00000007625) ENSPNYG00000007648 ENSPNYG00000007664 ENSPNYG00000007711 ENSPNYG00000007811 ENSPNYG00000007837 WDR47 (ENSPNYG00000007897) ENSPNYG00000007935 ENSPNYG00000007963 ENSPNYG00000008019 ENSPNYG00000008042 ENSPNYG00000008066 Nile tilapia MODERN SPECIES 9 rnf126 (ENSONIG00000010181) SUGP1 (ENSONIG00000010178) stk11 (ENSONIG00000010176) ENSONIG00000010173 ENSONIG00000010171 cirbpa (ENSONIG00000010169) NDUFA13 (ENSONIG00000010166) ENSONIG00000038228 ENSONIG00000010164 MAU2 (ENSONIG00000010160) ARMC6 (ENSONIG00000010159) SLC25A42 (ENSONIG00000010158) ENSONIG00000030949 ENSONIG00000010153 tm6sf2a (ENSONIG00000010150) ENSONIG00000010139 ##22 PRKAB2 (ENSONIG00000010137) ENSONIG00000010134 eeig2a (ENSONIG00000010131) prpf38b (ENSONIG00000028490) ENSONIG00000043125 ENSONIG00000033976 FNDC7 (ENSONIG00000010126) ENSONIG00000029113 ENSONIG00000038055 ENSONIG00000042792 ENSONIG00000010116 ENSONIG00000029099 ENSONIG00000039582 ENSONIG00000039920 ENSONIG00000010101 Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00950000183104.B.a.b.a.a ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 Oryzias ANCESTRAL SPECIES 12 ENSGT00950000183104.B.a.b.a.a ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.B ENSGT00940000169454 ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 Oryzias_a ANCESTRAL SPECIES 7 ENSGT00950000183104.B.a.b.a.a ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 Chinese medaka MODERN SPECIES 1097 plekhj1 (ENSOSIG00000022081) fzr1a (ENSOSIG00000022089) ENSOSIG00000022142 ENSOSIG00000022148 rnf126 (ENSOSIG00000022173) ENSOSIG00000022177 stk11 (ENSOSIG00000022185) ENSOSIG00000022190 cirbpa (ENSOSIG00000022200) NDUFA13 (ENSOSIG00000022202) ENSOSIG00000022205 ARMC6 (ENSOSIG00000022208) SLC25A42 (ENSOSIG00000022218) ENSOSIG00000022249 tm6sf2a (ENSOSIG00000022260) ENSOSIG00000022263 ##22 ENSOSIG00000022268 ##22 PRKAB2 (ENSOSIG00000022272) ENSOSIG00000022293 eeig2a (ENSOSIG00000022325) ENSOSIG00000000804 ENSOSIG00000000828 ENSOSIG00000000836 FNDC7 (ENSOSIG00000000866) WDR47 (ENSOSIG00000000934) CAMSAP2 (ENSOSIG00000000951) ticam1 (ENSOSIG00000000956) ENSOSIG00000000958 ENSOSIG00000000964 CAPN10 (ENSOSIG00000001009) eif4e2 (ENSOSIG00000001014) Japanese Medaka HdrR MODERN SPECIES 8 ENSORLG00000027131 ENSORLG00000015383 rnf126 (ENSORLG00000015395) SUGP1 (ENSORLG00000015411) stk11 (ENSORLG00000015419) ENSORLG00000022795 ENSORLG00000021934 cirbpa (ENSORLG00000015433) NDUFA13 (ENSORLG00000015440) ENSORLG00000015450 ARMC6 (ENSORLG00000015463) SLC25A42 (ENSORLG00000015475) ENSORLG00000023585 ENSORLG00000015492 tm6sf2a (ENSORLG00000015505) ENSORLG00000029991 ##22 ENSORLG00000015537 ##22 PRKAB2 (ENSORLG00000015550) ENSORLG00000015576 eeig2a (ENSORLG00000015603) ENSORLG00000015621 ENSORLG00000022270 FNDC7 (ENSORLG00000015635) ENSORLG00000025708 ENSORLG00000015659 WDR47 (ENSORLG00000015669) ENSORLG00000015700 ticam1 (ENSORLG00000021837) ENSORLG00000030465 ENSORLG00000028321 CAPN10 (ENSORLG00000015715) Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Aplocheiloidei ANCESTRAL SPECIES 19 ENSGT00950000183104.B.a.b.a.a ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 Turquoise killifish MODERN SPECIES 1618 ENSNFUG00015023078 Nfu_g_1_020323 (ENSNFUG00015023068) HCN2 (ENSNFUG00015023047) rnf126 (ENSNFUG00015023032) SUGP1 (ENSNFUG00015023006) stk11 (ENSNFUG00015022996) C22H19ORF26 (ENSNFUG00015022993) ENSNFUG00015022988 CIRBP (ENSNFUG00015022982) NDUFA13 (ENSNFUG00015022975) GATAD2A (ENSNFUG00015022969) ARMC6 (ENSNFUG00015022963) SLC25A42 (ENSNFUG00015022950) ENSNFUG00015022933 tm6sf2a (ENSNFUG00015022911) ENSNFUG00015022904 ##22 ENSNFUG00015022854 ##22 PRKAB2 (ENSNFUG00015022831) ENSNFUG00015022773 eeig2a (ENSNFUG00015022753) PRPF38B (ENSNFUG00015022748) ENSNFUG00015022743 ENSNFUG00015022740 ENSNFUG00015022732 ENSNFUG00015022723 ENSNFUG00015022712 WDR47 (ENSNFUG00015022696) CAMSAP2 (ENSNFUG00015022638) TICAM1 (ENSNFUG00015022631) ENSNFUG00015022614 ENSNFUG00015022611 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Poeciliinae ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Poecilia ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 NAME_6 ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.a.b ##22 Amazon molly MODERN SPECIES 465 ENSPFOG00000002770 ##22 lyrm5a (ENSPFOG00000003285) dnai7 (ENSPFOG00000003303) PRKAB2 (ENSPFOG00000003532) ENSPFOG00000003607 eeig2a (ENSPFOG00000003800) ENSPFOG00000004025 FNDC7 (ENSPFOG00000004117) ENSPFOG00000004266 WDR47 (ENSPFOG00000004391) CAMSAP2 (ENSPFOG00000004530) ENSPFOG00000005071 ENSPFOG00000005075 CAPN10 (ENSPFOG00000005083) eif4e2 (ENSPFOG00000005221) ENSPFOG00000005344 Cod MODERN SPECIES 21 ENSGMOG00000023161 ENSGMOG00000012177 ENSGMOG00000011849 ENSGMOG00000012165 ENSGMOG00000012159 ENSGMOG00000012155 ENSGMOG00000036457 ENSGMOG00000012137 NDUFA13 (ENSGMOG00000012133) ENSGMOG00000012130 MAU2 (ENSGMOG00000028080) ENSGMOG00000012115 ENSGMOG00000012114 ENSGMOG00000027592 ENSGMOG00000012104 ENSGMOG00000012093 ##22 ENSGMOG00000012088 ENSGMOG00000012086 eeig2a (ENSGMOG00000012081) ENSGMOG00000012080 ENSGMOG00000012070 ENSGMOG00000032782 ENSGMOG00000012066 ENSGMOG00000012060 ENSGMOG00000033486 ENSGMOG00000035008 ENSGMOG00000027576 ENSGMOG00000012034 ENSGMOG00000012019 eif4e2 (ENSGMOG00000012027) chrng (ENSGMOG00000012013) Protacanthopterygii ANCESTRAL SPECIES 43 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000163253.b.c.a.b ENSGT01030000234567.B.a.a.b.b.a.a ENSGT00940000165622.i.a ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g.c ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 239 ENSGT00410000025695.a.d ENSGT00940000158050.h.a.a ENSGT00390000009230.b.e ENSGT00510000049027.d ENSGT01030000234567.B.a.a.b.b.a.a ENSGT00940000163253.b.c.a.b.b ENSGT00940000165622.i.a.b ENSGT00390000007227.b.ab ENSGT00390000000719.u.b ENSGT00390000004097.a.f.c ENSGT00390000012198.b.a.b ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.j ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b.m ##22 ENSGT00950000183190.a.a.b.c.a.d ##22 ENSGT00940000159284.n ENSGT00940000164927.b.f ENSGT00940000156132.g.d ENSGT00730000111085.B.j ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a.g ENSGT00940000154667.b.b.f ENSGT00940000155561.m.c ENSGT00950000182975.a.a.a.a.b.b ENSGT00990000204320 Salmoninae_a ANCESTRAL SPECIES 51 ENSGT00940000158050.h.a.a ENSGT00390000009230.b.e ENSGT00510000049027.d ENSGT01030000234567.B.a.a.b.b.a.a.b ENSGT00940000163253.b.c.a.b.b ENSGT01030000234567.B.a.a.b.b.a.a.a ENSGT00940000165622.i.a.b ENSGT00390000007227.b.ab ENSGT00390000000719.u.b ENSGT00390000004097.a.f.c ENSGT00390000012198.b.a.b ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.j ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b.m ##22 ENSGT00950000183190.a.a.b.c.a.d ##22 ENSGT00940000159284.n ENSGT00940000164927.b.f ENSGT00940000156132.g.d ENSGT00730000111085.B.j ENSGT00940000157064.a.b.b.a.b ENSGT01060000251220 ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a.g ENSGT00940000154667.b.b.f ENSGT00940000155561.m.c ENSGT00950000182975.a.a.a.a.b.b ENSGT00990000204320 ENSGT01000000216279.b ENSGT00940000160041 Oncorhynchus ANCESTRAL SPECIES 46 ENSGT00390000009230.b.e ENSGT00510000049027.d ENSGT01030000234567.B.a.a.b.b.a.a.b ENSGT00940000163253.b.c.a.b.b ENSGT01030000234567.B.a.a.b.b.a.a.a ENSGT00940000165622.i.a.b ENSGT00940000153524.c.f.b ENSGT00390000007227.b.ab ENSGT00390000000719.u.b ENSGT00390000004097.a.f.c ENSGT00390000012198.b.a.b ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.j ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b.m ##22 ENSGT00950000183190.a.a.b.c.a.d ##22 ENSGT00940000159284.n ENSGT00940000164927.b.f ENSGT00940000156132.g.d ENSGT00730000111085.B.j ENSGT00940000157064.a.b.b.a.b ENSGT01060000251220 ENSGT00940000157064.a.b.b.a.a ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a.g ENSGT00940000154667.b.b.f ENSGT00940000155561.m.c ENSGT00950000182975.a.a.a.a.b.b ENSGT00990000204320 ENSGT01000000216279.b Oncorhynchus_a ANCESTRAL SPECIES 56 ENSGT00390000009230.b.e ENSGT00510000049027.d ENSGT01030000234567.B.a.a.b.b.a.a.b ENSGT00940000163253.b.c.a.b.b ENSGT01030000234567.B.a.a.b.b.a.a.a ENSGT00940000165622.i.a.b ENSGT00940000153524.c.f.b ENSGT00390000007227.b.ab ENSGT00390000000719.u.b ENSGT00390000004097.a.f.c ENSGT00390000012198.b.a.b ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.j ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b.m ##22 ENSGT00950000183190.a.a.b.c.a.d ##22 ENSGT00940000159284.n ENSGT00940000164927.b.f ENSGT00940000156132.g.d ENSGT00730000111085.B.j ENSGT00940000157064.a.b.b.a.b ENSGT01060000251220 ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a.g ENSGT00940000154667.b.b.f ENSGT00940000155561.m.c ENSGT00950000182975.a.a.a.a.b.b ENSGT00990000204320 ENSGT01000000216279.b ENSGT00940000160041 Coho salmon MODERN SPECIES 23 stk11 (ENSOKIG00005050234) ENSOKIG00005024194 ENSOKIG00005024199 ENSOKIG00005024217 ENSOKIG00005024320 ENSOKIG00005024598 ENSOKIG00005024876 NDUFA13 (ENSOKIG00005024891) ENSOKIG00005024908 MAU2 (ENSOKIG00005024928) ARMC6 (ENSOKIG00005025081) SLC25A42 (ENSOKIG00005025113) ENSOKIG00005025211 ENSOKIG00005025248 tm6sf2a (ENSOKIG00005025267) ENSOKIG00005025312 ##22 ENSOKIG00005025327 ##22 ENSOKIG00005025352 ##22 ENSOKIG00005025379 ENSOKIG00005025418 ENSOKIG00005025628 ENSOKIG00005025656 ENSOKIG00005025722 ENSOKIG00005025756 FNDC7 (ENSOKIG00005025860) WDR47 (ENSOKIG00005025924) ENSOKIG00005026032 CAMSAP2 (ENSOKIG00005026079) ccl20a.3 (ENSOKIG00005026106) ccl20a.3 (ENSOKIG00005026114) ENSOKIG00005026131 Rainbow trout MODERN SPECIES 29 ENSOMYG00000025581 ENSOMYG00000025686 ENSOMYG00000025872 ENSOMYG00000025963 ENSOMYG00000065822 ENSOMYG00000072349 YJEFN3 (ENSOMYG00000025997) nduad (ENSOMYG00000058070) GATAD2A (ENSOMYG00000026026) MAU2 (ENSOMYG00000026067) ENSOMYG00000026114 ENSOMYG00000026123 ENSOMYG00000026168 ENSOMYG00000052616 ENSOMYG00000026226 ENSOMYG00000026396 ##22 ENSOMYG00000051669 ENSOMYG00000026414 ENSOMYG00000064116 ENSOMYG00000026472 ENSOMYG00000063794 ENSOMYG00000026761 ENSOMYG00000048311 ENSOMYG00000018531 ENSOMYG00000056373 ENSOMYG00000026822 ENSOMYG00000048532 ENSOMYG00000026966 ENSOMYG00000027049 ENSOMYG00000027095 ENSOMYG00000059439 Salmo ANCESTRAL SPECIES 21 ENSGT00940000158050.h.a.a ENSGT00390000009230.b.e ENSGT00510000049027.d ENSGT01030000234567.B.a.a.b.b.a.a.b ENSGT00940000163253.b.c.a.b.b ENSGT01030000234567.B.a.a.b.b.a.a.a ENSGT00940000165622.i.a.b ENSGT00390000007227.b.ab ENSGT00390000000719.u.b ENSGT00390000004097.a.f.c ENSGT00390000012198.b.a.b ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.j ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b.m ##22 ENSGT00940000159284.n ENSGT00940000164927.b.f ENSGT00940000156132.g.d ENSGT00730000111085.B.j ENSGT00940000157064.a.b.b.a.b ENSGT01060000251220 ENSGT00390000004674.i.a.g ENSGT00940000154667.b.b.f ENSGT00940000155561.m.c ENSGT00950000182975.a.a.a.a.b.b ENSGT00990000204320 ENSGT01000000216279.b ENSGT00940000160041 ENSGT00940000157183.b.f ENSGT00390000013904.d River trout MODERN SPECIES 13 stk11 (ENSSTUG00000042429) ENSSTUG00000042453 ENSSTUG00000042472 ENSSTUG00000042522 ENSSTUG00000042759 ENSSTUG00000043586 ENSSTUG00000043723 YJEFN3 (ENSSTUG00000043746) NDUFA13 (ENSSTUG00000043802) GATAD2A (ENSSTUG00000043827) MAU2 (ENSSTUG00000043866) ARMC6 (ENSSTUG00000043983) SLC25A42 (ENSSTUG00000044005) ENSSTUG00000044045 tm6sf2a (ENSSTUG00000044061) ENSSTUG00000044082 ##22 ENSSTUG00000044085 ##22 ENSSTUG00000044096 ENSSTUG00000044100 ENSSTUG00000044106 ENSSTUG00000044119 ENSSTUG00000044134 ENSSTUG00000044167 ENSSTUG00000044312 FNDC7 (ENSSTUG00000023266) ENSSTUG00000023287 WDR47 (ENSSTUG00000023363) ENSSTUG00000023608 ccl20a.3 (ENSSTUG00000023659) ENSSTUG00000023720 chrng (ENSSTUG00000023761) Atlantic salmon MODERN SPECIES 5 ENSSSAG00000080551 ENSSSAG00000119558 ENSSSAG00000080695 ENSSSAG00000080787 ENSSSAG00000080809 ENSSSAG00000080819 ENSSSAG00000080823 ENSSSAG00000083741 ENSSSAG00000080841 armc6 (ENSSSAG00000080858) ENSSSAG00000090529 ENSSSAG00000119479 ENSSSAG00000004449 ENSSSAG00000090140 ENSSSAG00000094085 ENSSSAG00000067097 ##22 ENSSSAG00000087964 ENSSSAG00000067016 ENSSSAG00000067737 ENSSSAG00000118614 ENSSSAG00000085471 ENSSSAG00000067728 ENSSSAG00000067719 ENSSSAG00000103783 ENSSSAG00000014607 ENSSSAG00000111464 ENSSSAG00000088150 ENSSSAG00000119842 ENSSSAG00000113623 ENSSSAG00000111681 ENSSSAG00000103584 Huchen MODERN SPECIES 2412 ENSHHUG00000038268 tm6sf2a (ENSHHUG00000038277) ENSHHUG00000038297 ##22 ENSHHUG00000038305 ##22 Salmoninae ANCESTRAL SPECIES 111 ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00390000004674.i.a.h ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279 ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 Huchen MODERN SPECIES 231 ENSHHUG00000027105 MAU2 (ENSHHUG00000027118) SLC25A42 (ENSHHUG00000027205) ENSHHUG00000027216 ENSHHUG00000027246 ##22 ENSHHUG00000027236 ##22 ENSHHUG00000027249 ##22 PRKAB2 (ENSHHUG00000027255) ENSHHUG00000027264 eeig2a (ENSHHUG00000027298) ENSHHUG00000027304 ENSHHUG00000027315 ENSHHUG00000027324 ENSHHUG00000027340 WDR47 (ENSHHUG00000027345) CAMSAP2 (ENSHHUG00000027351) ENSHHUG00000027376 CAPN10 (ENSHHUG00000027384) eif4e2 (ENSHHUG00000027391) ENSHHUG00000027404 Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000157989.a.b.e ENSGT00940000164164.c ENSGT00940000156911.j.b ENSGT00940000162992.f ENSGT00940000158186.g.c ENSGT00390000015162.e.a.a ENSGT00940000158156.b.a.e ENSGT00940000154621.a.b.b.b.e ENSGT00940000156744.o.a.a ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00390000004674.i.a.h ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279.a ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 Salmo ANCESTRAL SPECIES 5 ENSGT00940000164164.c ENSGT00940000156911.j.b ENSGT00940000162992.f ENSGT00940000158186.g.c ENSGT00390000015162.e.a.a ENSGT00940000158156.b.a.e ENSGT00940000165636.c ENSGT00940000154621.a.b.b.b.e ENSGT00940000156744.o.a.a ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00390000004674.i.a.h ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279.a ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 ENSGT00940000157183.b.e River trout MODERN SPECIES 24 YTHDF1 (ENSSTUG00000014498) bhlhe23 (ENSSTUG00000014469) slc17a9b (ENSSTUG00000018656) gid8b (ENSSTUG00000018628) atp6ap1lb (ENSSTUG00000018619) ENSSTUG00000018616 oxsr1a (ENSSTUG00000017902) ENSSTUG00000017741 ENSSTUG00000016974 zp2l2 (ENSSTUG00000016856) cirbpa (ENSSTUG00000016842) NDUFA13 (ENSSTUG00000016829) ENSSTUG00000016817 MAU2 (ENSSTUG00000016679) ENSSTUG00000016635 ENSSTUG00000016614 ##22 ENSSTUG00000016605 ##22 PRKAB2 (ENSSTUG00000016582) ENSSTUG00000016540 EEIG2 (ENSSTUG00000016529) ENSSTUG00000016500 ENSSTUG00000016479 ENSSTUG00000016413 WDR47 (ENSSTUG00000016219) ENSSTUG00000016200 CAMSAP2 (ENSSTUG00000016170) ENSSTUG00000016151 CAPN10 (ENSSTUG00000015949) eif4e2 (ENSSTUG00000015928) ENSSTUG00000015901 ENSSTUG00000015882 Atlantic salmon MODERN SPECIES 22 ENSSSAG00000000842 ENSSSAG00000108037 ENSSSAG00000104644 ENSSSAG00000113248 ENSSSAG00000086825 ENSSSAG00000119689 ENSSSAG00000104907 ENSSSAG00000000720 ENSSSAG00000000616 ENSSSAG00000000556 NDUFA13 (ENSSSAG00000000515) ENSSSAG00000000487 MAU2 (ENSSSAG00000000382) ENSSSAG00000106809 ENSSSAG00000067130 ENSSSAG00000004356 ##22 ENSSSAG00000093507 ENSSSAG00000104897 ENSSSAG00000094829 eeig2a (ENSSSAG00000067008) ENSSSAG00000066998 ENSSSAG00000066987 ENSSSAG00000066980 ENSSSAG00000066971 ENSSSAG00000066550 ENSSSAG00000066296 ENSSSAG00000109197 CCL20 (ENSSSAG00000066280) capn10 (ENSSSAG00000066255) IF4E2 (ENSSSAG00000066237) ENSSSAG00000111019 Oncorhynchus ANCESTRAL SPECIES 11 ENSGT00940000164164.c ENSGT00940000156911.j.b ENSGT00940000162992.f ENSGT00940000158186.g.c ENSGT00390000015162.e.a.a ENSGT00940000158156.b.a.e ENSGT00940000165636.c ENSGT00940000154621.a.b.b.b.e ENSGT00940000156744.o.a.a ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279.a ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 ENSGT00940000157183.b.e ENSGT00940000157155.z ENSGT00940000157096 Oncorhynchus_a ANCESTRAL SPECIES 24 ENSGT00940000164164.c ENSGT00940000156911.j.b ENSGT00940000162992.f ENSGT00940000158186.g.c ENSGT00390000015162.e.a.a ENSGT00940000158156.b.a.e ENSGT00940000165636.c ENSGT00940000154621.a.b.b.b.e ENSGT00940000156744.o.a.a ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279.a ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 ENSGT00940000157183.b.e ENSGT00940000157155.z ENSGT00940000157096 Coho salmon MODERN SPECIES 19 slc17a9b (ENSOKIG00005050172) gid8b (ENSOKIG00005050182) ENSOKIG00005050187 ENSOKIG00005050190 ENSOKIG00005050192 oxsr1a (ENSOKIG00005050213) ENSOKIG00005050273 ENSOKIG00005050341 ENSOKIG00005050490 cirbpa (ENSOKIG00005050571) NDUFA13 (ENSOKIG00005037669) ENSOKIG00005037754 MAU2 (ENSOKIG00005037827) ENSOKIG00005038225 ENSOKIG00005038240 ENSOKIG00005038275 ##22 PRKAB2 (ENSOKIG00005038289) ENSOKIG00005038348 eeig2a (ENSOKIG00005038639) ENSOKIG00005038651 ENSOKIG00005038670 ENSOKIG00005038678 ENSOKIG00005038706 WDR47 (ENSOKIG00005038794) CAMSAP2 (ENSOKIG00005038992) ENSOKIG00005039059 CAPN10 (ENSOKIG00005039101) eif4e2 (ENSOKIG00005039295) ENSOKIG00005039339 ENSOKIG00005039367 COPS7B (ENSOKIG00005039386) Rainbow trout MODERN SPECIES 20 bhlhe23 (ENSOMYG00000018557) ENSOMYG00000074191 slc17a9b (ENSOMYG00000018470) gid8b (ENSOMYG00000018444) ENSOMYG00000018435 ENSOMYG00000018424 ENSOMYG00000018073 ENSOMYG00000017999 ENSOMYG00000017933 ENSOMYG00000017892 NDUFA13 (ENSOMYG00000017843) ENSOMYG00000017810 MAU2 (ENSOMYG00000017653) ENSOMYG00000052024 ENSOMYG00000017520 ENSOMYG00000017479 ##22 ENSOMYG00000017461 ENSOMYG00000017195 ENSOMYG00000017169 ENSOMYG00000017121 ENSOMYG00000017027 ENSOMYG00000046784 ENSOMYG00000016851 ENSOMYG00000016797 ENSOMYG00000016775 ENSOMYG00000016725 eif4e2 (ENSOMYG00000016694) ENSOMYG00000016682 ENSOMYG00000016673 ENSOMYG00000016666 ENSOMYG00000056370 Northern pike MODERN SPECIES 2 rnf126 (ENSELUG00000008634) SUGP1 (ENSELUG00000001358) stk11 (ENSELUG00000008700) ENSELUG00000008714 ENSELUG00000008730 ENSELUG00000009593 ENSELUG00000009851 cirbpa (ENSELUG00000009891) ndufa13 (ENSELUG00000009943) GATAD2A (ENSELUG00000009982) MAU2 (ENSELUG00000010052) ARMC6 (ENSELUG00000010104) SLC25A42 (ENSELUG00000010136) ENSELUG00000010199 tm6sf2a (ENSELUG00000010244) ENSELUG00000010302 ##22 PRKAB2 (ENSELUG00000010339) ENSELUG00000010370 eeig2a (ENSELUG00000010383) ENSELUG00000010390 ENSELUG00000010438 ENSELUG00000010480 ENSELUG00000010503 ENSELUG00000010535 WDR47 (ENSELUG00000010569) CAMSAP2 (ENSELUG00000000381) ccl20 (ENSELUG00000010643) CAPN10 (ENSELUG00000010751) eif4e2 (ENSELUG00000010780) ENSELUG00000010806 chrng (ENSELUG00000010887) Clupeocephala ANCESTRAL SPECIES 126 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.a ENSGT00940000157064.a.b.a ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Otomorpha ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Otophysi ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Cyprininae ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Common carp reference MODERN SPECIES 29 ENSCCRG00000072730 ENSCCRG00000051541 #15 ENSCCRG00000081706 ENSCCRG00000067913 ENSCCRG00000069672 ENSCCRG00000057786 ENSCCRG00000064873 ENSCCRG00000045632 ENSCCRG00000080463 ENSCCRG00000079559 ENSCCRG00000071301 ENSCCRG00000048859 ENSCCRG00000060570 ENSCCRG00000080756 ENSCCRG00000063924 ENSCCRG00000069356 ##22 Euteleosteomorpha ANCESTRAL SPECIES 64 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00990000204320 ENSGT01020000230600 ENSGT00940000159706 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 1 SUGP1 (ENSOTSG00005015377) stk11 (ENSOTSG00005015380) ENSOTSG00005015382 ENSOTSG00005015383 ENSOTSG00005015385 ENSOTSG00005015399 ENSOTSG00005015412 ENSOTSG00005015639 YJEFN3 (ENSOTSG00005015641) NDUFA13 (ENSOTSG00005015643) ENSOTSG00005015646 MAU2 (ENSOTSG00005015650) ARMC6 (ENSOTSG00005015695) SLC25A42 (ENSOTSG00005015696) tm6sf2a (ENSOTSG00005015698) ENSOTSG00005015699 ##22 ENSOTSG00005015700 ##22 ENSOTSG00005015701 ENSOTSG00005015702 ENSOTSG00005015709 ENSOTSG00005015710 ENSOTSG00005015712 ENSOTSG00005015714 FNDC7 (ENSOTSG00005031577) ENSOTSG00005031578 WDR47 (ENSOTSG00005031580) ENSOTSG00005031646 ccl20a.3 (ENSOTSG00005031647) ccl20a.3 (ENSOTSG00005031648) ENSOTSG00005031649 ENSOTSG00005031650 Chinook salmon MODERN SPECIES 1 stk11 (ENSOTSG00005015380) ENSOTSG00005015382 ENSOTSG00005015383 ENSOTSG00005015385 ENSOTSG00005015399 ENSOTSG00005015412 ENSOTSG00005015639 YJEFN3 (ENSOTSG00005015641) NDUFA13 (ENSOTSG00005015643) ENSOTSG00005015646 MAU2 (ENSOTSG00005015650) ARMC6 (ENSOTSG00005015695) SLC25A42 (ENSOTSG00005015696) tm6sf2a (ENSOTSG00005015698) ENSOTSG00005015699 ##22 ENSOTSG00005015700 ##22 ENSOTSG00005015701 ENSOTSG00005015702 ENSOTSG00005015709 ENSOTSG00005015710 ENSOTSG00005015712 ENSOTSG00005015714 FNDC7 (ENSOTSG00005031577) ENSOTSG00005031578 WDR47 (ENSOTSG00005031580) ENSOTSG00005031646 ccl20a.3 (ENSOTSG00005031647) ccl20a.3 (ENSOTSG00005031648) ENSOTSG00005031649 ENSOTSG00005031650 chrng (ENSOTSG00005031652) Acanthomorphata ANCESTRAL SPECIES ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.B ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Eupercaria ANCESTRAL SPECIES 22 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 Tetraodontidae ANCESTRAL SPECIES 13 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT01070000253760.b.a.a.a.b.d.a.b.b ENSGT00940000172979 ENSGT00940000159706 Fugu MODERN SPECIES 14 ENSTRUG00000009472 rnf126 (ENSTRUG00000009560) SUGP1 (ENSTRUG00000009724) stk11 (ENSTRUG00000009891) ENSTRUG00000010019 ENSTRUG00000010069 cirbp (ENSTRUG00000010187) NDUFA13 (ENSTRUG00000031395) ENSTRUG00000010208 ARMC6 (ENSTRUG00000010295) SLC25A42 (ENSTRUG00000010352) ENSTRUG00000010430 tm6sf2a (ENSTRUG00000010612) ENSTRUG00000023574 ##22 ENSTRUG00000029868 ##22 ENSTRUG00000010846 ##22 PRKAB2 (ENSTRUG00000023478) ENSTRUG00000011259 eeig2a (ENSTRUG00000011642) ENSTRUG00000011765 ENSTRUG00000033150 ENSTRUG00000032528 FNDC7 (ENSTRUG00000014913) ENSTRUG00000031126 ENSTRUG00000014852 WDR47 (ENSTRUG00000014812) CAMSAP2 (ENSTRUG00000014682) ticam (ENSTRUG00000014679) ENSTRUG00000033431 ENSTRUG00000000561 ENSTRUG00000002476 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Carangaria ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Pleuronectoidei ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a.b ##22 Tongue sole MODERN SPECIES 12 ENSCSEG00000015718 ENSCSEG00000015701 mterf4 (ENSCSEG00000015693) ENSCSEG00000015685 klhl24a (ENSCSEG00000015671) ENSCSEG00000015638 MAP6D1 (ENSCSEG00000015627) ENSCSEG00000015622 camk2n1a (ENSCSEG00000015619) mul1a (ENSCSEG00000015611) alg3 (ENSCSEG00000015600) ENSCSEG00000015576 ENSCSEG00000015573 ENSCSEG00000015108 ##22 ENSCSEG00000015096 ENSCSEG00000015091 ##22 PRKAB2 (ENSCSEG00000015082) ENSCSEG00000015069 eeig2a (ENSCSEG00000015040) ENSCSEG00000015030 ENSCSEG00000015022 ENSCSEG00000015018 ENSCSEG00000014993 ENSCSEG00000014966 WDR47 (ENSCSEG00000014922) CAMSAP2 (ENSCSEG00000014885) ticam1 (ENSCSEG00000014878) ENSCSEG00000014844 ENSCSEG00000014826 CAPN10 (ENSCSEG00000014809) ENSCSEG00000014798 Sarcopterygii ANCESTRAL SPECIES 273 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000154654 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00530000063604.B Tetrapoda ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.a ##22 Sauria ANCESTRAL SPECIES 7 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00390000008608 ENSGT00940000156906 ENSGT00390000001322 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 Archelosauria ANCESTRAL SPECIES 9 ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Archosauria ANCESTRAL SPECIES 27 ENSGT00510000046975.b.q ENSGT00390000007598 ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 ENSGT00940000155005 Aves ANCESTRAL SPECIES 7 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160836.d ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 Neognathae ANCESTRAL SPECIES 8 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160836.d ENSGT00940000160493.a ENSGT00940000160493.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 Galloanserae ANCESTRAL SPECIES 8 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Anatidae ANCESTRAL SPECIES 5 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT01040000240999 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 ENSGT00940000155005 Duck MODERN SPECIES 26 ENSAPLG00000014905 TMEM121 (ENSAPLG00000013683) TEDC1 (ENSAPLG00000014968) CRIP1 (ENSAPLG00000014982) CRIP2 (ENSAPLG00000015110) MTA1 (ENSAPLG00000015316) PACS2 (ENSAPLG00000015577) SEC22B (ENSAPLG00000015847) NOTCH2 (ENSAPLG00000015861) HMGCS2 (ENSAPLG00000016193) ENSAPLG00000031083 PHGDH (ENSAPLG00000027527) ENSAPLG00000020859 ENSAPLG00000024527 ENSAPLG00000016209 ##22 ENSAPLG00000030221 ##22 PRKAB2 (ENSAPLG00000016261) ENSAPLG00000030988 ENSAPLG00000016309 PLPP6 (ENSAPLG00000029646) FAM78B (ENSAPLG00000016430) PRDX6 (ENSAPLG00000016432) TADA1 (ENSAPLG00000005434) ENSAPLG00000029878 FASLG (ENSAPLG00000005345) SUCO (ENSAPLG00000004827) PIGC (ENSAPLG00000001596) DNM3 (ENSAPLG00000004816) MYOC (ENSAPLG00000016603) PRRC2C (ENSAPLG00000003698) FMO4 (ENSAPLG00000003552) Cryptodira ANCESTRAL SPECIES 8 ENSGT00390000007598 ENSGT00510000046975.b.p.b ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00940000155005 Testudinoidea ANCESTRAL SPECIES 5 ENSGT00510000046975.b.p.b ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056.z ENSGT00510000047399 Emydidae ANCESTRAL SPECIES 24 ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT00990000205100.A.a ENSGT00390000003866.a.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT01030000236207.a.a ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056.z ENSGT00510000047399 Three-toed box turtle MODERN SPECIES 99 ENSTMTG00000003131 ENSTMTG00000003148 ENSTMTG00000003168 ENSTMTG00000003196 ENSTMTG00000003204 ENSTMTG00000003218 ENSTMTG00000003278 ENSTMTG00000003429 ENSTMTG00000004645 ENSTMTG00000004791 ENSTMTG00000005012 ENSTMTG00000006780 ENSTMTG00000006788 ENSTMTG00000006821 ##22 ENSTMTG00000006853 ##22 ENSTMTG00000006935 ##22 ENSTMTG00000006948 ENSTMTG00000006966 ENSTMTG00000006986 ENSTMTG00000007003 ENSTMTG00000007012 ENSTMTG00000007029 ENSTMTG00000007061 ENSTMTG00000007079 ENSTMTG00000007099 ENSTMTG00000007113 ENSTMTG00000007167 ENSTMTG00000007198 ENSTMTG00000007507 ENSTMTG00000007529 ENSTMTG00000007539 Lepidosauria ANCESTRAL SPECIES 62 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00390000008608 ENSGT00940000156906 ENSGT00390000001322 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 Episquamata ANCESTRAL SPECIES 1 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00940000157769 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185631 ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00980000198621.c ENSGT00980000198621.d Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT01040000244782 ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000156111 ENSGT00940000158282 Elapidae ANCESTRAL SPECIES 1 ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000160907 ENSGT00940000159284 Elapidae_a ANCESTRAL SPECIES 32 ENSGT00940000156906.f ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000160907 ENSGT00940000159284 Acanthophiinae ANCESTRAL SPECIES 33 ENSGT00940000156906.f ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00990000213446 ENSGT00940000160907 ENSGT00940000159284 Mainland tiger snake MODERN SPECIES 162 MGST3 (ENSNSUG00000010703) TMEM121 (ENSNSUG00000010704) ENSNSUG00000010705 ENSNSUG00000010708 PIGC (ENSNSUG00000010713) SUCO (ENSNSUG00000010720) ENSNSUG00000010776 FASLG (ENSNSUG00000010777) ENSNSUG00000010779 ENSNSUG00000010780 ENSNSUG00000010781 ENSNSUG00000010784 PHGDH (ENSNSUG00000010786) ENSNSUG00000010788 ##22 ENSNSUG00000010791 ##22 ENSNSUG00000010794 ##22 ENSNSUG00000010795 ENSNSUG00000010797 ENSNSUG00000010799 ENSNSUG00000010800 PRKAB2 (ENSNSUG00000010803) Coelacanth MODERN SPECIES 1900 ENSLACG00000007226 ##22 SCYL3 (ENSLACG00000005734) ENSLACG00000022427 SMG7 (ENSLACG00000000972) Euteleostomi ANCESTRAL SPECIES 84 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00940000159391 ENSGT00390000014594 ENSGT00390000014781 ENSGT01030000234558.C ENSGT00940000156012 ENSGT00390000014243 ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00390000010743.a ENSGT01030000234606.b ENSGT00940000154654 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00530000063604.B Actinopterygii ANCESTRAL SPECIES 84 ENSGT00390000012568 ENSGT00940000156236 ENSGT00390000010743.a ENSGT01030000234606.b ENSGT00940000154654 ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00390000013877 ENSGT01030000234618.B ENSGT00940000165818 ENSGT00560000078707 Neopterygii ANCESTRAL SPECIES 78 ENSGT00390000012568 ENSGT00940000156236 ENSGT00390000010743.a ENSGT01030000234606.b ENSGT00940000154654 ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000166185 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00390000013877 ENSGT01030000234618.B ENSGT00940000165818 Osteoglossocephalai ANCESTRAL SPECIES 150 ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a.g.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000156132.g Osteoglossiformes ANCESTRAL SPECIES 51 ENSGT00940000159221.e ENSGT00930000151041 ENSGT00940000166019.p ENSGT00530000063751.a.b ENSGT00730000111014.m ENSGT00390000012568 ENSGT00940000156236.b ENSGT00390000010743.a.b ENSGT01030000234606.b.e.a ENSGT00940000154654.a.b ENSGT00940000155635.db ENSGT00940000154149.b.a.g.a ENSGT00390000003574.c ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.a.a ##22 ENSGT00940000159284 ENSGT00940000156132.g ENSGT00730000111085.B.k ENSGT00940000157064.a.b.a ENSGT00390000004674.k.a ENSGT00940000157607.m.a ENSGT00940000177587 ENSGT00940000154667.b.b ENSGT00940000165672 ENSGT00940000155561.k ENSGT00950000182975.a.a.a.a.b ENSGT00940000153391.c.b.b.i.a.a ENSGT00940000156725.b ENSGT00940000158821.i Asian bonytongue MODERN SPECIES 24 prg4b (ENSSFOG00015005447) TPR (ENSSFOG00015005315) ENSSFOG00015005299 ptgs2b (ENSSFOG00015005265) PLA2G4A (ENSSFOG00015005213) ENSSFOG00015005195 HMCN1 (ENSSFOG00015004942) IVNS1ABP (ENSSFOG00015004910) ENSSFOG00015004895 TRMT1L (ENSSFOG00015004878) rnf2 (ENSSFOG00015004836) niban1a (ENSSFOG00015004827) KIFAP3 (ENSSFOG00015004760) ntmt2 (ENSSFOG00015032658) prrx1b (ENSSFOG00015032140) ENSSFOG00015028306 ##22 ENSSFOG00015004636 ##22 slc25a24 (ENSSFOG00015004547) fam102bb (ENSSFOG00015004479) henmt1 (ENSSFOG00015032683) ENSSFOG00015004405 FNDC7 (ENSSFOG00015004287) ENSSFOG00015004252 ENSSFOG00015004201 WDR47 (ENSSFOG00015004135) camsap2a (ENSSFOG00015004040) ddx59 (ENSSFOG00015003999) kif14 (ENSSFOG00015003775) ENSSFOG00015032583 nr5a2 (ENSSFOG00015011650) PTPRC (ENSSFOG00015003517) Clupeocephala ANCESTRAL SPECIES 227 ENSGT00930000151041 ENSGT01020000231030 ENSGT00940000166019 ENSGT00940000166054 ENSGT00940000160168.b.a ENSGT00940000164633 ENSGT00940000161063 ENSGT00530000063751.a.b ENSGT00730000111014.o.a ENSGT00390000012568 ENSGT00940000154499 ENSGT00940000154149.b.a.g.a ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00390000005318.a.a.b ENSGT00940000156470.v.a ENSGT00390000006876 ENSGT00940000164927.a ENSGT00940000156132.h ENSGT00390000004798 ENSGT00390000004674.i.b ENSGT00940000157607 ENSGT00940000154667.b.a Otomorpha ANCESTRAL SPECIES 203 ENSGT00530000063751.a.a ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b.h ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00940000156132.h ENSGT00390000004798 ENSGT00940000157064.a.b.b.a.a.q ENSGT00980000198596.B ENSGT00390000004674.i.b ENSGT00940000157607 ENSGT00940000154667.b.a Otophysi ANCESTRAL SPECIES 7 ENSGT00530000063751.a.a ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b.h ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.d ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00390000013141 ENSGT00940000166937 ENSGT00950000183149.C.b ENSGT00940000157136.b ENSGT00940000159860.e ENSGT01050000244824.B ENSGT00940000156618.c.a ENSGT01030000234597.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00940000156852.d ENSGT00950000182843.a.a.a.b.a.a.a.a ENSGT00390000004799 ENSGT00390000005861.a Cyprinoidei ANCESTRAL SPECIES 8 ENSGT00530000063751.a.a ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b.h ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.d ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00390000013141 ENSGT00940000166937 ENSGT00950000183149.C.b ENSGT00940000157136.b ENSGT01030000234597.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00940000156852.d ENSGT00950000182843.a.a.a.b.a.a.a.a ENSGT00940000163104 ENSGT00390000004799 ENSGT00390000005861.a ENSGT00940000157501.h ENSGT00940000159887.e Cyprininae ANCESTRAL SPECIES 339 ENSGT00390000014886.j ENSGT00940000159466.d.c.b ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b.a.b ##22 ENSGT00940000164927.a.b ENSGT00390000013141.b ENSGT00940000166937.a ENSGT00950000183149.C.b.d ENSGT00940000157136.b.a ENSGT00940000159860.e.a ENSGT01050000244824.B.db.a ENSGT00940000156618.c.a.b ENSGT01030000234597.a.b.a.b.f ENSGT01030000234633.A.a.b.b ENSGT00940000156852.d.a ENSGT00950000182843.a.a.a.b.a.a.a.a ENSGT00390000004799.n ENSGT00390000005861.a.b Goldfish MODERN SPECIES 12 ywhaqa (ENSCARG00000007885) ADAM17 (ENSCARG00000007700) cpsf3 (ENSCARG00000007650) asap2b (ENSCARG00000007402) e2f6 (ENSCARG00000007357) mboat2b (ENSCARG00000006068) kidins220b (ENSCARG00000005927) id2b (ENSCARG00000005906) lratd1 (ENSCARG00000005899) rnaseh1 (ENSCARG00000005871) rps7 (ENSCARG00000005846) allc (ENSCARG00000005816) ntmt2 (ENSCARG00000005808) gorab (ENSCARG00000005799) prrx1b (ENSCARG00000005769) ENSCARG00000005760 ##22 ENSCARG00000005722 ##22 slc25a24 (ENSCARG00000005688) elp3 (ENSCARG00000005669) si:ch211-63o20.7 (ENSCARG00000005660) pnocb (ENSCARG00000005656) znf395b (ENSCARG00000005649) paqr8 (ENSCARG00000005646) mcm3 (ENSCARG00000005596) il17a/f3 (ENSCARG00000005581) stmn4 (ENSCARG00000005572) emilin1a (ENSCARG00000005563) ankef1a (ENSCARG00000005555) snap25a (ENSCARG00000005536) sccpdhb (ENSCARG00000005286) cnstb (ENSCARG00000005271) Cyprininae_a ANCESTRAL SPECIES 257 ENSGT00730000111014.o.b.b ENSGT00940000156236.a.a.f ENSGT00390000010743.a.a.b ENSGT01030000234606.b.e.b.d ENSGT00940000154654.a.b.h.c ENSGT00940000154614.qe ENSGT00940000155635.u.b ENSGT00390000001254.e ENSGT00530000063646.a.c ENSGT00940000154149.b.a.g.b.a ENSGT00390000003574.a.b ENSGT00390000008371.a.e ENSGT00390000008371.a.f ENSGT00390000014886.i ENSGT00940000159466.d.c.a ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b.a.b ##22 ENSGT00950000183190.a.a.b.c.b.b ##22 ENSGT00950000183190.a.a.b.c.b.a.a ##22 ENSGT00940000164927.a.a ENSGT00390000013141.a ENSGT00940000166937.b ENSGT00950000183149.C.b.c ENSGT00940000157136.b.b ENSGT01050000244824.B.db.b ENSGT00940000156618.c.a.a ENSGT01030000234597.a.b.a.b.e ENSGT01030000234633.A.a.b.a ENSGT00940000156852.d.b ENSGT00390000005861.a.a ENSGT00940000159075.B.j.b Common carp reference DUPLICATION Common carp reference MODERN SPECIES 28 ENSCCRG00000038110 prg4b (ENSCCRG00000045562) tprb (ENSCCRG00000045588) pdcb (ENSCCRG00000073915) ptgs2b (ENSCCRG00000045662) PLA2G4A (ENSCCRG00000045689) arpc5b (ENSCCRG00000074120) HMCN1 (ENSCCRG00000021811) ivns1abpa (ENSCCRG00000028200) ENSCCRG00000028194 niban1a (ENSCCRG00000027491) kifap3a (ENSCCRG00000023708) ntmt2 (ENSCCRG00000037004) gorab (ENSCCRG00000023654) prrx1b (ENSCCRG00000071513) ENSCCRG00000069171 ##22 ENSCCRG00000070865 ##22 slc25a24 (ENSCCRG00000062518) elp3 (ENSCCRG00000007703) si:ch211-63o20.7 (ENSCCRG00000066954) znf395b (ENSCCRG00000007688) mcm3 (ENSCCRG00000020414) il17a/f3 (ENSCCRG00000078734) stmn4 (ENSCCRG00000068496) emilin1a (ENSCCRG00000056865) ankef1a (ENSCCRG00000032559) snap25a (ENSCCRG00000034090) sccpdhb (ENSCCRG00000009379) cnstb (ENSCCRG00000078235) ENSCCRG00000009391 hnrnpub (ENSCCRG00000009415) Common carp reference MODERN SPECIES 34 prg4b (ENSCCRG00000041122) tprb (ENSCCRG00000041197) pdcb (ENSCCRG00000059989) ptgs2b (ENSCCRG00000047699) PLA2G4A (ENSCCRG00000042045) arpc5b (ENSCCRG00000045534) HMCN1 (ENSCCRG00000012667) ivns1abpa (ENSCCRG00000022224) ENSCCRG00000079211 TRMT1L (ENSCCRG00000022240) niban1a (ENSCCRG00000022247) kifap3a (ENSCCRG00000022274) ntmt2 (ENSCCRG00000022893) gorab (ENSCCRG00000055088) prrx1b (ENSCCRG00000076310) ENSCCRG00000030163 ##22 ENSCCRG00000047315 ##22 slc25a24 (ENSCCRG00000047317) elp3 (ENSCCRG00000047319) si:ch211-63o20.7 (ENSCCRG00000054786) pnocb (ENSCCRG00000059629) znf395b (ENSCCRG00000005473) paqr8 (ENSCCRG00000072910) mcm3 (ENSCCRG00000005245) il17a/f3 (ENSCCRG00000067104) stmn4 (ENSCCRG00000074692) emilin1a (ENSCCRG00000075193) ankef1a (ENSCCRG00000034142) ENSCCRG00000057731 sccpdhb (ENSCCRG00000003293) cnstb (ENSCCRG00000061873) Golden-line barbel MODERN SPECIES 259 si:dkey-97o5.1 (ENSSGRG00000037360) scyl3 (ENSSGRG00000037353) prg4b (ENSSGRG00000037352) tprb (ENSSGRG00000037250) pdcb (ENSSGRG00000037240) ptgs2b (ENSSGRG00000036812) PLA2G4A (ENSSGRG00000036515) arpc5b (ENSSGRG00000036499) ivns1abpa (ENSSGRG00000036336) ENSSGRG00000036329 TRMT1L (ENSSGRG00000036324) kifap3a (ENSSGRG00000036160) ntmt2 (ENSSGRG00000036153) ENSSGRG00000036151 prrx1b (ENSSGRG00000036137) ENSSGRG00000036134 ##22 ENSSGRG00000036130 ##22 slc25a24 (ENSSGRG00000036074) elp3 (ENSSGRG00000035922) si:ch211-63o20.7 (ENSSGRG00000035921) pnocb (ENSSGRG00000035920) znf395b (ENSSGRG00000035919) mcm3 (ENSSGRG00000034715) il17a/f3 (ENSSGRG00000034707) stmn4 (ENSSGRG00000034706) emilin1a (ENSSGRG00000034705) ENSSGRG00000034703 snap25a (ENSSGRG00000034697) cnstb (ENSSGRG00000034696) sccpdhb (ENSSGRG00000034695) cnstb (ENSSGRG00000034694) Euteleosteomorpha ANCESTRAL SPECIES 70 ENSGT00530000063751.a.a ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00530000063498.B ENSGT00940000166530 ENSGT00940000157693 ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725 ENSGT00390000003015.c ENSGT01030000235036 Protacanthopterygii ANCESTRAL SPECIES 30 ENSGT00940000155117.f.a ENSGT00390000012568.l ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a.c ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.b ENSGT00940000158851 ENSGT00950000182946.lb.b.k.a ENSGT00730000111085.A ENSGT00530000063498.B ENSGT00940000166530 ENSGT00940000157693 ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725 ENSGT00390000003015.c ENSGT01030000235036 ENSGT00620000088018.v ENSGT00940000175705 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 385 ENSGT00940000155117.f.a.h ENSGT00390000010743.a.a.e ENSGT01030000234606.b.e.b.g ENSGT00940000155635.r ENSGT00940000154149.b.a.g.b.c ENSGT00390000003574.a.d ENSGT00940000159466.e.b ENSGT00950000183190.a.a.a.b.c ##22 ENSGT00950000183190.a.a.a.a.a.a.b ##22 ENSGT00940000155705.b.u ENSGT00940000156259.a.a.c ENSGT00530000063632.A ENSGT00950000182946.lb.b.k.a.a ENSGT00730000111085.A.fb ENSGT00940000166530.c ENSGT00940000157693.o ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725.i ENSGT00390000003015.c.d ENSGT01030000235036 ENSGT00620000088018.v.a ENSGT00390000014984.q Huchen MODERN SPECIES 755 ptgs2b (ENSHHUG00000009695) PLA2G4A (ENSHHUG00000009516) ivns1abpa (ENSHHUG00000009468) niban1a (ENSHHUG00000009454) kifap3a (ENSHHUG00000009409) prrx1b (ENSHHUG00000009326) ENSHHUG00000009317 ##22 Salmoninae_a ANCESTRAL SPECIES 103 ENSGT00940000160748.a.d ENSGT00940000157019.g.a.h ENSGT00390000007029.e.a.b ENSGT00390000007336.a.a.c ENSGT00940000155446.g ENSGT00940000158821.k ENSGT00940000156725.e.a ENSGT00940000155152.f.b.h ENSGT00940000155117.f.a.h ENSGT00390000010743.a.a.e ENSGT01030000234606.b.e.b.g ENSGT00940000155635.r ENSGT00940000154149.b.a.g.b.c ENSGT00390000003574.a.d ENSGT00940000159466.e.b ENSGT00950000183190.a.a.a.b.c ##22 ENSGT00950000183190.a.a.a.a.a.a.b ##22 ENSGT00940000155705.b.u ENSGT00940000156259.a.a.c ENSGT00530000063632.A ENSGT00950000182946.lb.b.k.a.a ENSGT00730000111085.A.fb ENSGT00940000166530.c ENSGT00940000157693.o ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725.i ENSGT00390000003015.c.d ENSGT01030000235036 ENSGT00620000088018.v.a ENSGT00390000014984.q Oncorhynchus ANCESTRAL SPECIES ENSGT00940000157019.g.a.h ENSGT00390000007029.e.a.b ENSGT00390000007336.a.a.c ENSGT00940000155446.g ENSGT00940000158821.k ENSGT00940000156725.e.a ENSGT00940000155152.f.b.h ENSGT00940000155117.f.a.h ENSGT00390000010743.a.a.e ENSGT01030000234606.b.e.b.g ENSGT00940000155635.r ENSGT00940000154149.b.a.g.b.c ENSGT00390000003574.a.d ENSGT01010000229774 ENSGT00940000159466.e.b ENSGT00950000183190.a.a.a.b.c ##22 ENSGT00950000183190.a.a.a.a.a.a.b ##22 ENSGT00940000155705.b.u ENSGT00940000156259.a.a.c ENSGT00530000063632.A ENSGT00730000111085.A.fb ENSGT00940000166530.c ENSGT00940000157693.o ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725.i ENSGT00390000003015.c.d ENSGT01030000235036 ENSGT00620000088018.v.a ENSGT00390000014984.q ENSGT00390000006224.l Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.b.c ##22 Chinook salmon MODERN SPECIES 2915 ENSOTSG00005021885 ##22 ENSOTSG00005021887 ENSOTSG00005021888 Rainbow trout MODERN SPECIES 22 ENSOMYG00000011779 ENSOMYG00000050036 ENSOMYG00000054799 nek7 (ENSOMYG00000054062) ENSOMYG00000011730 ENSOMYG00000071691 ptgs2b (ENSOMYG00000010634) ENSOMYG00000010353 ivns1abpa (ENSOMYG00000010178) ENSOMYG00000056789 ENSOMYG00000010134 ENSOMYG00000056400 ENSOMYG00000009964 ENSOMYG00000009797 ENSOMYG00000031234 ENSOMYG00000009726 ##22 ENSOMYG00000009687 ##22 MAST2 (ENSOMYG00000009424) ENSOMYG00000007606 POMGNT1 (ENSOMYG00000005992) prpf38a (ENSOMYG00000005627) mpl (ENSOMYG00000005603) tie1 (ENSOMYG00000005480) C1orf210 (ENSOMYG00000005222) ap1m3 (ENSOMYG00000004877) TMEM125 (ENSOMYG00000052670) CFAP57 (ENSOMYG00000004476) EBNA1BP2 (ENSOMYG00000004302) cfap144 (ENSOMYG00000004248) ENSOMYG00000004227 lrp8 (ENSOMYG00000004123) Salmo ANCESTRAL SPECIES 64 ENSGT00940000157019.g.a.h ENSGT00390000007029.e.a.b ENSGT00390000007336.a.a.c ENSGT00940000155446.g ENSGT00940000158821.k ENSGT00940000156725.e.a ENSGT00940000155152.f.b.h ENSGT00940000155117.f.a.h ENSGT00390000010743.a.a.e ENSGT01030000234606.b.e.b.g ENSGT00940000154654.a.b.e ENSGT00940000155635.r ENSGT00940000154149.b.a.g.b.c ENSGT00390000003574.a.d ENSGT00940000159466.e.b ENSGT00950000183190.a.a.a.b.c ##22 ENSGT00950000183190.a.a.a.a.a.a.b ##22 ENSGT00940000155705.b.u ENSGT00940000156259.a.a.c ENSGT00530000063632.A ENSGT00950000182946.lb.b.k.a.a ENSGT00730000111085.A.fb ENSGT00940000166530.c ENSGT00940000157693.o ENSGT00510000048988 ENSGT00940000166725.i ENSGT00390000003015.c.d ENSGT00620000088018.v.a ENSGT00390000014984.q ENSGT00390000006224.l ENSGT00940000156282.a.b.a Atlantic salmon MODERN SPECIES 15 PHB2 (ENSSSAG00000075693) pde6d (ENSSSAG00000076055) ENSSSAG00000076064 ENSSSAG00000076289 DENND1B (ENSSSAG00000076291) LHX9 (ENSSSAG00000077539) nek7 (ENSSSAG00000077057) ENSSSAG00000077019 ENSSSAG00000090467 ptgs2b (ENSSSAG00000054742) ENSSSAG00000076307 ivns1abpa (ENSSSAG00000077563) ENSSSAG00000111849 ENSSSAG00000077689 ENSSSAG00000113189 ENSSSAG00000078794 ##22 ENSSSAG00000078806 ##22 ENSSSAG00000090366 ENSSSAG00000120618 ENSSSAG00000097280 ENSSSAG00000110126 ENSSSAG00000079173 ENSSSAG00000079187 pr38a (ENSSSAG00000079192) TPOR (ENSSSAG00000079193) tie1 (ENSSSAG00000079214) ap1m3 (ENSSSAG00000045323) C1orf210 (ENSSSAG00000079365) TMEM125 (ENSSSAG00000119454) CFAP57 (ENSSSAG00000079370) ebna1bp2 (ENSSSAG00000079391) River trout MODERN SPECIES 33 dda1 (ENSSTUG00000000812) ABHD8 (ENSSTUG00000000828) DENND1B (ENSSTUG00000000837) ENSSTUG00000000854 lhx9 (ENSSTUG00000000861) nek7 (ENSSTUG00000000907) crb1 (ENSSTUG00000001111) b3galt2 (ENSSTUG00000001121) ptgs2b (ENSSTUG00000001191) PLA2G4A (ENSSTUG00000001927) arpc5b (ENSSTUG00000002513) ivns1abpa (ENSSTUG00000002544) niban1a (ENSSTUG00000002614) kifap3a (ENSSTUG00000002766) prrx1b (ENSSTUG00000004069) ENSSTUG00000004149 ##22 ENSSTUG00000004176 ##22 MAST2 (ENSSTUG00000004246) PIK3R3 (ENSSTUG00000004411) pomgnt1 (ENSSTUG00000005824) ENSSTUG00000005913 prpf38a (ENSSTUG00000005917) mpl (ENSSTUG00000005928) tie1 (ENSSTUG00000005979) C1orf210 (ENSSTUG00000006574) ap1m3 (ENSSTUG00000006631) TMEM125 (ENSSTUG00000008099) CFAP57 (ENSSTUG00000008107) ebna1bp2 (ENSSTUG00000008168) cfap144 (ENSSTUG00000008194) dmrt2b (ENSSTUG00000008202) Salmoninae ANCESTRAL SPECIES 36 ENSGT00940000155117.f.a.g ENSGT00390000012568.l ENSGT00940000156236.a.a ENSGT00390000010743.a.a.f ENSGT01030000234606.b.e.b.h ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635.q ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b.d ENSGT00390000003574.a.c ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.e.a ENSGT00950000183190.a.a.a.b.d ##22 ENSGT00950000183190.a.a.a.a.a.a.a ##22 ENSGT00940000155705.b.v ENSGT00940000156259.a.a.d ENSGT00940000158851 ENSGT00950000182946.lb.b.k.a.b ENSGT00730000111085.A.gb ENSGT00530000063498.B ENSGT00940000166530.d ENSGT00940000157693.p ENSGT00940000173535 ENSGT00940000166725.j ENSGT00390000003015.c.c ENSGT00620000088018.v.b ENSGT00940000175705 ENSGT00390000014984.r Huchen MODERN SPECIES 2686 ENSHHUG00000042463 ##22 ENSHHUG00000042467 ##22 ENSHHUG00000042491 tekt4 (ENSHHUG00000042493) ENSHHUG00000042498 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.b.d ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.b.d ##22 Rainbow trout MODERN SPECIES 26 pdcb (ENSOMYG00000009724) ptgs2b (ENSOMYG00000009717) PLA2G4A (ENSOMYG00000009095) arpc5b (ENSOMYG00000059388) ENSOMYG00000070670 ENSOMYG00000007823 ivns1abpa (ENSOMYG00000005937) ENSOMYG00000005863 TRMT1L (ENSOMYG00000033328) niban1a (ENSOMYG00000033306) kifap3a (ENSOMYG00000031488) ntmt2 (ENSOMYG00000031264) gorab (ENSOMYG00000031254) prrx1b (ENSOMYG00000009768) ENSOMYG00000063736 ENSOMYG00000050606 ##22 ENSOMYG00000031208 ##22 ENSOMYG00000074663 ##22 MAST2 (ENSOMYG00000030907) ENSOMYG00000060619 ENSOMYG00000003122 ENSOMYG00000057624 ENSOMYG00000030788 TSPAN1 (ENSOMYG00000030775) ENSOMYG00000030768 prpf38a (ENSOMYG00000030755) orc1 (ENSOMYG00000030223) mpl (ENSOMYG00000029911) tie1 (ENSOMYG00000029871) si:ch73-185c24.2 (ENSOMYG00000029835) ap1m3 (ENSOMYG00000029640) Acanthomorphata ANCESTRAL SPECIES 91 ENSGT00530000063751.a.a ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b ENSGT00730000111085.A ENSGT00530000063498.B Euacanthomorphacea ANCESTRAL SPECIES 59 ENSGT00530000063751.a.a ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b ENSGT00730000111085.A ENSGT00530000063498.B Percomorphaceae ANCESTRAL SPECIES 52 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Ovalentaria ANCESTRAL SPECIES 9 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00940000159571 ENSGT00940000156511.b.db ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT01050000245196 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.b ##22 Cyprinodontoidei ANCESTRAL SPECIES 156 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Poeciliinae ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.b ##22 Platyfish MODERN SPECIES 20 rnf126 (ENSXMAG00000019329) SUGP1 (ENSXMAG00000019331) stk11 (ENSXMAG00000019332) ENSXMAG00000023845 ENSXMAG00000019334 cirbpa (ENSXMAG00000019336) NDUFA13 (ENSXMAG00000019337) ENSXMAG00000019339 ARMC6 (ENSXMAG00000019340) SLC25A42 (ENSXMAG00000019341) ENSXMAG00000022489 tm6sf2a (ENSXMAG00000012807) ENSXMAG00000025599 ENSXMAG00000025627 ##22 ENSXMAG00000025099 ENSXMAG00000029954 ##22 lyrm5a (ENSXMAG00000025461) dnai7 (ENSXMAG00000008690) PRKAB2 (ENSXMAG00000029888) ENSXMAG00000008670 eeig2a (ENSXMAG00000008664) ENSXMAG00000023831 FNDC7 (ENSXMAG00000008647) ENSXMAG00000023688 ENSXMAG00000008634 WDR47 (ENSXMAG00000008623) CAMSAP2 (ENSXMAG00000008609) ENSXMAG00000022282 ENSXMAG00000029151 CAPN10 (ENSXMAG00000008593) ENSXMAG00000027659 NAME_4 ANCESTRAL SPECIES 530 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Mummichog DUPLICATION Mummichog MODERN SPECIES 714 ENSFHEG00000009244 ##22 ENSFHEG00000009285 ##22 ENSFHEG00000009297 ##22 ENSFHEG00000009338 MAST2 (ENSFHEG00000009383) PIK3R3 (ENSFHEG00000009432) Mummichog MODERN SPECIES 714 ENSFHEG00000009244 ##22 ENSFHEG00000009285 ##22 ENSFHEG00000009297 ##22 ENSFHEG00000009338 MAST2 (ENSFHEG00000009383) PIK3R3 (ENSFHEG00000009432) Oryzias ANCESTRAL SPECIES 5 ENSGT00940000159554 ENSGT01050000244887.A.a.b ENSGT00390000010568 ENSGT00940000159571 ENSGT00940000169015 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g.u ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT01050000245196 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000018319.a.b.b.b.a.a ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00950000182946.lb.b.g.v ENSGT00940000159127 Oryzias_a ANCESTRAL SPECIES 14 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g.u.e.a.a.a ENSGT00950000182946.lb.b.g.u.e.a.b ENSGT00950000182946.lb.b.g.u.f.a ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT01050000245196 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000018319.a.b.b.b.a.a ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00950000182946.lb.b.g.v ENSGT00940000159127 Chinese medaka MODERN SPECIES 1357 ENSOSIG00000013135 ENSOSIG00000013134 TRMT1L (ENSOSIG00000011712) niban1a (ENSOSIG00000011685) gorab (ENSOSIG00000011684) prrx1b (ENSOSIG00000011680) ENSOSIG00000011679 ##22 ENSOSIG00000011678 ENSOSIG00000013236 PIK3R3 (ENSOSIG00000012943) gadd45ba (ENSOSIG00000012936) pomgnt1 (ENSOSIG00000012896) ENSOSIG00000012890 DIRAS1 (ENSOSIG00000012889) APC2 (ENSOSIG00000012884) ENSOSIG00000012881 reep6 (ENSOSIG00000012879) ENSOSIG00000012875 ENSOSIG00000012874 Oryzias_b ANCESTRAL SPECIES 102 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g.u ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A Javanese ricefish MODERN SPECIES 18 ENSOJAG00000001206 ENSOJAG00000001182 ENSOJAG00000001177 ENSOJAG00000001175 ENSOJAG00000001173 orc1 (ENSOJAG00000001168) prpf38a (ENSOJAG00000001163) ENSOJAG00000001158 ENSOJAG00000001156 ENSOJAG00000001148 TRMT1L (ENSOJAG00000001049) niban1a (ENSOJAG00000001008) ntmt2 (ENSOJAG00000000993) gorab (ENSOJAG00000000989) prrx1b (ENSOJAG00000000972) ENSOJAG00000000957 ##22 ENSOJAG00000000952 ENSOJAG00000000944 ##22 MAST2 (ENSOJAG00000000849) ENSOJAG00000000835 ENSOJAG00000000832 PIK3R3 (ENSOJAG00000000818) TSPAN1 (ENSOJAG00000000803) pomgnt1 (ENSOJAG00000000425) ENSOJAG00000000109 CARTPT (ENSOJAG00000000091) gadd45ba (ENSOJAG00000000064) DIRAS1 (ENSOJAG00000012742) ENSOJAG00000012730 ENSOJAG00000012719 ENSOJAG00000012711 Indian medaka DUPLICATION Indian medaka MODERN SPECIES 13 orc1 (ENSOMEG00000016361) prpf38a (ENSOMEG00000016333) ENSOMEG00000000407 ENSOMEG00000016296 TRMT1L (ENSOMEG00000016275) ENSOMEG00000016252 niban1a (ENSOMEG00000016212) ntmt2 (ENSOMEG00000016084) gorab (ENSOMEG00000016063) prrx1b (ENSOMEG00000016022) ENSOMEG00000015988 ENSOMEG00000015963 ##22 MAST2 (ENSOMEG00000015898) MAST2 (ENSOMEG00000015859) PIK3R3 (ENSOMEG00000015809) TSPAN1 (ENSOMEG00000015747) pomgnt1 (ENSOMEG00000015719) CARTPT (ENSOMEG00000015662) atpaf1 (ENSOMEG00000015639) RHPN1 (ENSOMEG00000015614) ENSOMEG00000015574 ENSOMEG00000015544 ENSOMEG00000015535 gpx7 (ENSOMEG00000015521) ENSOMEG00000015508 reep6 (ENSOMEG00000015501) ENSOMEG00000015494 Indian medaka MODERN SPECIES 10 fzr1a (ENSOMEG00000021007) ENSOMEG00000021065 ENSOMEG00000021114 rnf126 (ENSOMEG00000021160) SUGP1 (ENSOMEG00000021298) stk11 (ENSOMEG00000021335) ENSOMEG00000021392 ENSOMEG00000021422 cirbpa (ENSOMEG00000021469) NDUFA13 (ENSOMEG00000021487) ENSOMEG00000021514 ARMC6 (ENSOMEG00000021531) SLC25A42 (ENSOMEG00000021554) ENSOMEG00000021633 tm6sf2a (ENSOMEG00000021701) ENSOMEG00000021725 ##22 ENSOMEG00000021771 ##22 ENSOMEG00000021795 ##22 PRKAB2 (ENSOMEG00000021827) ENSOMEG00000021913 EEIG2 (ENSOMEG00000021980) ENSOMEG00000022050 ENSOMEG00000022118 ENSOMEG00000022197 FNDC7 (ENSOMEG00000022247) ENSOMEG00000022266 ENSOMEG00000022313 WDR47 (ENSOMEG00000022386) CAMSAP2 (ENSOMEG00000022446) ticam1 (ENSOMEG00000022468) ENSOMEG00000022475 Ovalentaria_B ANCESTRAL SPECIES 67 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h Cichlidae ANCESTRAL SPECIES 90 ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h Pseudocrenilabrinae ANCESTRAL SPECIES 23 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 ENSGT01050000244924.a.a.b.a.a ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000011521 ENSGT00940000153456.a ENSGT00940000164676 ENSGT00940000155265.b.b.a ENSGT00940000155265.b.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 ENSGT00940000161068 Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 ENSGT01050000244924.a.a.b.a.a ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000011521 ENSGT00940000153456.a ENSGT00940000164676 ENSGT00940000155265.b.b.a ENSGT00940000155265.b.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 395 ENSNBRG00000003414 serpinc1 (ENSNBRG00000003451) stil (ENSNBRG00000003594) PTBP1 (ENSNBRG00000003676) b4galt6 (ENSNBRG00000003712) ENSNBRG00000003752 orc1 (ENSNBRG00000003807) prpf38a (ENSNBRG00000004013) TRMT1L (ENSNBRG00000004053) niban1a (ENSNBRG00000004158) kifap3a (ENSNBRG00000004237) ntmt2 (ENSNBRG00000004426) gorab (ENSNBRG00000004446) prrx1b (ENSNBRG00000004459) ENSNBRG00000004532 ##22 ENSNBRG00000004539 ##22 MAST2 (ENSNBRG00000004570) PIK3R3 (ENSNBRG00000004658) TSPAN1 (ENSNBRG00000004720) pomgnt1 (ENSNBRG00000004816) ifit14 (ENSNBRG00000004880) C8orf82 (ENSNBRG00000004885) naprt (ENSNBRG00000004897) ENSNBRG00000004922 ENSNBRG00000005036 ENSNBRG00000005173 ADCYAP1R1 (ENSNBRG00000005297) ENSNBRG00000005370 ENSNBRG00000005417 ZC3H3 (ENSNBRG00000005454) mafaa (ENSNBRG00000005493) Lyretail cichlid MODERN SPECIES 395 zbtb37 (ENSNBRG00000003403) ENSNBRG00000003414 serpinc1 (ENSNBRG00000003451) stil (ENSNBRG00000003594) PTBP1 (ENSNBRG00000003676) b4galt6 (ENSNBRG00000003712) ENSNBRG00000003752 orc1 (ENSNBRG00000003807) prpf38a (ENSNBRG00000004013) TRMT1L (ENSNBRG00000004053) niban1a (ENSNBRG00000004158) kifap3a (ENSNBRG00000004237) ntmt2 (ENSNBRG00000004426) gorab (ENSNBRG00000004446) prrx1b (ENSNBRG00000004459) ENSNBRG00000004532 ##22 ENSNBRG00000004539 ##22 MAST2 (ENSNBRG00000004570) PIK3R3 (ENSNBRG00000004658) TSPAN1 (ENSNBRG00000004720) pomgnt1 (ENSNBRG00000004816) ifit14 (ENSNBRG00000004880) C8orf82 (ENSNBRG00000004885) naprt (ENSNBRG00000004897) ENSNBRG00000004922 ENSNBRG00000005036 ENSNBRG00000005173 ADCYAP1R1 (ENSNBRG00000005297) ENSNBRG00000005370 ENSNBRG00000005417 ZC3H3 (ENSNBRG00000005454) Haplochromini ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.b ##22 Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 ENSGT01050000244924.a.a.b.a.a ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000011521 ENSGT00940000153456.a ENSGT00940000164676 ENSGT00940000155265.b.b.a ENSGT00940000155265.b.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 Haplochromini_B ANCESTRAL SPECIES 32 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 ENSGT01050000244924.a.a.b.a.a ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT01100000263526.A.b.b.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000011521 ENSGT00940000153456.a ENSGT00940000164676 ENSGT00940000155265.b.b.a ENSGT00940000155265.b.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 Eastern happy MODERN SPECIES 8 dph5 (ENSACLG00000021156) s1pr1 (ENSACLG00000021207) zbtb37 (ENSACLG00000021221) serpinc1 (ENSACLG00000021255) stil (ENSACLG00000021285) PTBP1 (ENSACLG00000021320) b4galt6 (ENSACLG00000021413) ENSACLG00000021460 orc1 (ENSACLG00000021540) prpf38a (ENSACLG00000021595) TRMT1L (ENSACLG00000021625) niban1a (ENSACLG00000021721) ntmt2 (ENSACLG00000021750) gorab (ENSACLG00000021784) prrx1b (ENSACLG00000021807) ENSACLG00000021864 ##22 ENSACLG00000021880 ##22 ENSACLG00000021965 MAST2 (ENSACLG00000021999) ENSACLG00000022106 PIK3R3 (ENSACLG00000022144) ENSACLG00000022208 ENSACLG00000022219 TSPAN1 (ENSACLG00000022250) pomgnt1 (ENSACLG00000022347) ENSACLG00000022477 ENSACLG00000022528 ENSACLG00000022533 C8orf82 (ENSACLG00000022537) naprt (ENSACLG00000022543) ENSACLG00000022573 Nile tilapia MODERN SPECIES 8 s1pr1 (ENSONIG00000020775) zbtb37 (ENSONIG00000007779) serpinc1 (ENSONIG00000007781) PTBP1 (ENSONIG00000007784) b4galt6 (ENSONIG00000007793) ENSONIG00000007798 orc1 (ENSONIG00000007807) ENSONIG00000007813 prpf38a (ENSONIG00000007816) TRMT1L (ENSONIG00000007823) fam129a (ENSONIG00000007826) kifap3a (ENSONIG00000007836) ntmt2 (ENSONIG00000007840) gorab (ENSONIG00000007842) prrx1b (ENSONIG00000007843) ENSONIG00000039886 ##22 ENSONIG00000007844 ##22 MAST2 (ENSONIG00000007847) PIK3R3 (ENSONIG00000007853) TSPAN1 (ENSONIG00000007856) pomgnt1 (ENSONIG00000007857) ENSONIG00000020776 C8orf82 (ENSONIG00000019480) naprt (ENSONIG00000019479) ENSONIG00000019477 ENSONIG00000019475 ENSONIG00000019474 ADCYAP1R1 (ENSONIG00000019468) ENSONIG00000036103 ENSONIG00000019464 ENSONIG00000034020 Pomacentridae ANCESTRAL SPECIES 143 ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Bicolor damselfish MODERN SPECIES 500 stk11 (ENSSPAG00000023023) CBARP (ENSSPAG00000023030) ENSSPAG00000023035 cirbpa (ENSSPAG00000023037) NDUFA13 (ENSSPAG00000023039) GATAD2A (ENSSPAG00000023043) ENSSPAG00000023048 MAU2 (ENSSPAG00000023055) ARMC6 (ENSSPAG00000023069) SLC25A42 (ENSSPAG00000023080) ENSSPAG00000023091 ENSSPAG00000023096 tm6sf2a (ENSSPAG00000023103) ENSSPAG00000023108 ENSSPAG00000023117 ##22 ENSSPAG00000023139 ##22 PRKAB2 (ENSSPAG00000023145) ENSSPAG00000023152 eeig2a (ENSSPAG00000023156) prpf38b (ENSSPAG00000023160) ENSSPAG00000023170 FNDC7 (ENSSPAG00000023175) ENSSPAG00000023178 ENSSPAG00000023182 ENSSPAG00000023187 WDR47 (ENSSPAG00000023199) CAMSAP2 (ENSSPAG00000023212) ENSSPAG00000023223 ENSSPAG00000023234 ENSSPAG00000023239 ENSSPAG00000023241 Pomacentridae_A ANCESTRAL SPECIES 153 ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 Spiny chromis MODERN SPECIES 1961 ENSAPOG00000023195 ##22 ENSAPOG00000023281 ##22 Amphiprion ANCESTRAL SPECIES 162 ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Orange clownfish MODERN SPECIES 11 klf2a (ENSAPEG00000021043) ENSAPEG00000021093 ENSAPEG00000021103 cherp (ENSAPEG00000021128) dohh (ENSAPEG00000021227) RSPH6A (ENSAPEG00000021256) LONP1 (ENSAPEG00000021281) LRRC24 (ENSAPEG00000021375) prpf38a (ENSAPEG00000021414) TRMT1L (ENSAPEG00000021433) ENSAPEG00000021578 niban1a (ENSAPEG00000021593) ntmt2 (ENSAPEG00000021627) gorab (ENSAPEG00000021657) prrx1b (ENSAPEG00000021672) ENSAPEG00000021740 ##22 ENSAPEG00000021770 ##22 ENSAPEG00000021785 ENSAPEG00000021822 ENSAPEG00000021887 ENSAPEG00000021991 lrrc40 (ENSAPEG00000022030) ENSAPEG00000022042 phb2b (ENSAPEG00000022060) pde6d (ENSAPEG00000022089) rpl36 (ENSAPEG00000022120) ENSAPEG00000022136 lmnb2 (ENSAPEG00000022153) commd2 (ENSAPEG00000022198) TRAPPC8 (ENSAPEG00000022218) ctns (ENSAPEG00000022299) Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000177981 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Carangaria ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.b ##22 Pleuronectoidei ANCESTRAL SPECIES ENSGT00950000183190.a.a.a.b ##22 Tongue sole MODERN SPECIES 5 st8sia5 (ENSCSEG00000001273) rpl37 (ENSCSEG00000001286) ptgs1 (ENSCSEG00000001302) pdcl (ENSCSEG00000001308) rpl28 (ENSCSEG00000001312) ENSCSEG00000001317 ENSCSEG00000001326 ENSCSEG00000001345 notch1a (ENSCSEG00000001351) camsap1a (ENSCSEG00000001372) KCNT1 (ENSCSEG00000001395) psmd5 (ENSCSEG00000001432) #18 ENSCSEG00000001439 ENSCSEG00000001443 ENSCSEG00000001446 ENSCSEG00000001451 ##22 setd1ba (ENSCSEG00000001458) tmem120b (ENSCSEG00000001465) orai1b (ENSCSEG00000001475) morn3 (ENSCSEG00000001477) KDM2B (ENSCSEG00000001487) rnf34b (ENSCSEG00000001528) lrrc75bb (ENSCSEG00000001538) ENSCSEG00000001542 GGT5 (ENSCSEG00000001549) cabp1b (ENSCSEG00000001553) ENSCSEG00000001560 ENSCSEG00000001564 prlhr2b (ENSCSEG00000001566) anxa4 (ENSCSEG00000001569) AAK1 (ENSCSEG00000001577) Carangaria_A ANCESTRAL SPECIES 73 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Barramundi perch MODERN SPECIES 12 ENSLCAG00010008609 nrd1b (ENSLCAG00010008718) ENSLCAG00010009145 ENSLCAG00010009157 ENSLCAG00010009169 ENSLCAG00010009173 ENSLCAG00010009176 prpf38a (ENSLCAG00010009186) ENSLCAG00010009197 TRMT1L (ENSLCAG00010009200) niban1a (ENSLCAG00010009219) kifap3a (ENSLCAG00010009279) ntmt2 (ENSLCAG00010009328) gorab (ENSLCAG00010009330) prrx1b (ENSLCAG00010009338) ENSLCAG00010009348 ##22 ENSLCAG00010009351 ##22 MAST2 (ENSLCAG00010009380) Anabantaria ANCESTRAL SPECIES 7 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Zig-zag eel DUPLICATION Zig-zag eel MODERN SPECIES 18 ENSMAMG00000015528 ENSMAMG00000015485 ENSMAMG00000015518 ENSMAMG00000015463 ENSMAMG00000015431 ENSMAMG00000026330 ENSMAMG00000027044 ENSMAMG00000015305 niban1a (ENSMAMG00000015296) kifap3a (ENSMAMG00000015251) ntmt2 (ENSMAMG00000015231) gorab (ENSMAMG00000024412) prrx1b (ENSMAMG00000015198) ENSMAMG00000015173 ##22 ENSMAMG00000015165 ##22 ENSMAMG00000015160 ##22 MAST2 (ENSMAMG00000015099) PIK3R3 (ENSMAMG00000015060) TSPAN1 (ENSMAMG00000015037) pomgnt1 (ENSMAMG00000014990) ENSMAMG00000014977 ENSMAMG00000015400 ENSMAMG00000014948 ENSMAMG00000014890 RHPN1 (ENSMAMG00000014859) ENSMAMG00000014818 mafaa (ENSMAMG00000014803) ZC3H3 (ENSMAMG00000014787) ENSMAMG00000014735 ENSMAMG00000014718 ENSMAMG00000014684 Zig-zag eel MODERN SPECIES 18 zgc:113223 (ENSMAMG00000015567) reep6 (ENSMAMG00000015545) ENSMAMG00000015528 ENSMAMG00000015485 ENSMAMG00000015518 ENSMAMG00000015463 ENSMAMG00000015431 ENSMAMG00000026330 ENSMAMG00000027044 ENSMAMG00000015305 niban1a (ENSMAMG00000015296) kifap3a (ENSMAMG00000015251) ntmt2 (ENSMAMG00000015231) gorab (ENSMAMG00000024412) prrx1b (ENSMAMG00000015198) ENSMAMG00000015173 ##22 ENSMAMG00000015165 ##22 ENSMAMG00000015160 ##22 MAST2 (ENSMAMG00000015099) PIK3R3 (ENSMAMG00000015060) TSPAN1 (ENSMAMG00000015037) pomgnt1 (ENSMAMG00000014990) ENSMAMG00000014977 ENSMAMG00000015400 ENSMAMG00000014948 ENSMAMG00000014890 RHPN1 (ENSMAMG00000014859) ENSMAMG00000014818 mafaa (ENSMAMG00000014803) ZC3H3 (ENSMAMG00000014787) ENSMAMG00000014735 Anabantoidei ANCESTRAL SPECIES 6 ENSGT00940000166794 ENSGT00950000183171.A.b.a.b ENSGT00940000159037 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Climbing perch MODERN SPECIES 17 ENSATEG00000004827 ENSATEG00000004759 ENSATEG00000004709 ENSATEG00000004698 ENSATEG00000004678 ENSATEG00000004658 ENSATEG00000013279 ENSATEG00000004619 ENSATEG00000004608 ENSATEG00000004573 niban1a (ENSATEG00000004540) kifap3a (ENSATEG00000004457) ntmt2 (ENSATEG00000029904) gorab (ENSATEG00000004422) prrx1b (ENSATEG00000004399) ENSATEG00000004346 ##22 ENSATEG00000004325 ##22 PIK3R3 (ENSATEG00000004078) ENSATEG00000004022 POMGNT1 (ENSATEG00000003917) ENSATEG00000003903 ENSATEG00000030160 ENSATEG00000003890 ENSATEG00000028259 ENSATEG00000003849 ENSATEG00000003823 RHPN1 (ENSATEG00000003810) ENSATEG00000003758 mafaa (ENSATEG00000028752) ZC3H3 (ENSATEG00000003718) ENSATEG00000003655 Siamese fighting fish MODERN SPECIES 15 PATJ (ENSBSLG00000007730) ENSBSLG00000007757 thop1 (ENSBSLG00000008008) sgta (ENSBSLG00000009554) nrd1b (ENSBSLG00000009863) ENSBSLG00000011312 orc1 (ENSBSLG00000011328) prpf38a (ENSBSLG00000011340) TRMT1L (ENSBSLG00000011357) niban1a (ENSBSLG00000011377) kifap3a (ENSBSLG00000011776) ntmt2 (ENSBSLG00000012402) ENSBSLG00000012437 gorab (ENSBSLG00000012442) prrx1b (ENSBSLG00000012451) ENSBSLG00000013051 ##22 ENSBSLG00000013139 ##22 ENSBSLG00000013235 ENSBSLG00000013282 PIK3R3 (ENSBSLG00000013563) ENSBSLG00000013679 TSPAN1 (ENSBSLG00000013694) pomgnt1 (ENSBSLG00000013715) ENSBSLG00000013811 ENSBSLG00000013818 ENSBSLG00000013834 ENSBSLG00000013854 ENSBSLG00000013870 si:ch211-284e20.8 (ENSBSLG00000013880) NOS1AP (ENSBSLG00000013889) ENSBSLG00000013927 Eupercaria ANCESTRAL SPECIES 8 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 ENSGT00940000160231 ENSGT00940000159037 ENSGT00950000183171.A.b.a.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a.d ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Fugu MODERN SPECIES 12 ENSTRUG00000024309 ENSTRUG00000029944 ENSTRUG00000000240 nfia (ENSTRUG00000013602) ENSTRUG00000030817 nrd1b (ENSTRUG00000028772) ENSTRUG00000026216 ENSTRUG00000027475 ENSTRUG00000030568 orc1 (ENSTRUG00000003887) prpf38a (ENSTRUG00000003374) TRMT1L (ENSTRUG00000002396) niban1a (ENSTRUG00000002101) ntmt2 (ENSTRUG00000001965) gorab (ENSTRUG00000033490) ENSTRUG00000020341 ##22 ENSTRUG00000003483 ##22 MAST2 (ENSTRUG00000026427) PIK3R3 (ENSTRUG00000000148) TSPAN1 (ENSTRUG00000033498) pomgnt1 (ENSTRUG00000030797) ENSTRUG00000001292 gpx7 (ENSTRUG00000029634) ENSTRUG00000033071 TUT4 (ENSTRUG00000024719) RHPN1 (ENSTRUG00000002685) atpaf1 (ENSTRUG00000033403) ENSTRUG00000032031 ENSTRUG00000028921 ENSTRUG00000002572 pacap1b (ENSTRUG00000004289) Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Ballan wrasse MODERN SPECIES 1995 ENSLBEG00000013587 ##22 Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00940000177981 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00950000182916.a.b.a.a.a.a.e.b ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Gilthead seabream MODERN SPECIES 2 ttr (ENSSAUG00010007903) ENSSAUG00010007898 ENSSAUG00010007893 TUT4 (ENSSAUG00010007879) gpx7 (ENSSAUG00010007871) TUT4 (ENSSAUG00010007861) ENSSAUG00010007848 ENSSAUG00010007846 ENSSAUG00010007843 TRMT1L (ENSSAUG00010007735) niban1a (ENSSAUG00010007614) kifap3a (ENSSAUG00010007590) ntmt2 (ENSSAUG00010007576) gorab (ENSSAUG00010007575) prrx1b (ENSSAUG00010007560) ENSSAUG00010007557 ##22 MAST2 (ENSSAUG00010013481) PIK3R3 (ENSSAUG00010012678) TSPAN1 (ENSSAUG00010012652) pomgnt1 (ENSSAUG00010012601) ENSSAUG00010012596 ENSSAUG00010012593 ENSSAUG00010012588 prpf38a (ENSSAUG00010012580) ENSSAUG00010012577 orc1 (ENSSAUG00010012555) ENSSAUG00010012544 nrd1b (ENSSAUG00010012143) ENSSAUG00010012117 frem1b (ENSSAUG00010011803) nfia (ENSSAUG00010011785) Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 489 nrd1b (ENSLCRG00005001392) ENSLCRG00005005722 orc1 (ENSLCRG00005005729) ENSLCRG00005005808 prpf38a (ENSLCRG00005005809) ENSLCRG00005005811 ENSLCRG00005005813 TRMT1L (ENSLCRG00005005814) niban1a (ENSLCRG00005005824) kifap3a (ENSLCRG00005005844) ntmt2 (ENSLCRG00005006095) gorab (ENSLCRG00005006096) prrx1b (ENSLCRG00005006097) ENSLCRG00005006099 ##22 ENSLCRG00005006100 ENSLCRG00005006101 ##22 MAST2 (ENSLCRG00005006105) PIK3R3 (ENSLCRG00005006158) TSPAN1 (ENSLCRG00005006351) pomgnt1 (ENSLCRG00005006376) ENSLCRG00005006433 ENSLCRG00005006435 gpc1a (ENSLCRG00005006437) ENSLCRG00005006443 si:ch211-262h13.5 (ENSLCRG00005007588) ENSLCRG00005007592 MCOLN3 (ENSLCRG00005007600) DNAI3 (ENSLCRG00005007603) SYDE2 (ENSLCRG00005007608) zgc:65873 (ENSLCRG00005007609) si:ch211-284e20.8 (ENSLCRG00005007610) Large yellow croaker MODERN SPECIES 489 frem1b (ENSLCRG00005000876) ENSLCRG00005001356 nrd1b (ENSLCRG00005001392) ENSLCRG00005005722 orc1 (ENSLCRG00005005729) ENSLCRG00005005808 prpf38a (ENSLCRG00005005809) ENSLCRG00005005811 ENSLCRG00005005813 TRMT1L (ENSLCRG00005005814) niban1a (ENSLCRG00005005824) kifap3a (ENSLCRG00005005844) ntmt2 (ENSLCRG00005006095) gorab (ENSLCRG00005006096) prrx1b (ENSLCRG00005006097) ENSLCRG00005006099 ##22 ENSLCRG00005006100 ENSLCRG00005006101 ##22 MAST2 (ENSLCRG00005006105) PIK3R3 (ENSLCRG00005006158) TSPAN1 (ENSLCRG00005006351) pomgnt1 (ENSLCRG00005006376) ENSLCRG00005006433 ENSLCRG00005006435 gpc1a (ENSLCRG00005006437) ENSLCRG00005006443 si:ch211-262h13.5 (ENSLCRG00005007588) ENSLCRG00005007592 MCOLN3 (ENSLCRG00005007600) DNAI3 (ENSLCRG00005007603) SYDE2 (ENSLCRG00005007608) European seabass MODERN SPECIES 17 ARHGAP8 (ENSDLAG00005026790) ENSDLAG00005030797 ENSDLAG00005021292 ENSDLAG00005006324 ENSDLAG00005031368 ENSDLAG00005027689 ENSDLAG00005021756 ENSDLAG00005006336 ENSDLAG00005006371 niban1a (ENSDLAG00005030465) kifap3a (ENSDLAG00005006960) ntmt2 (ENSDLAG00005007122) gorab (ENSDLAG00005034105) ENSDLAG00005029644 prrx1b (ENSDLAG00005026578) ENSDLAG00005030898 ##22 ENSDLAG00005007220 ##22 MAST2 (ENSDLAG00005007444) PIK3R3 (ENSDLAG00005009702) TSPAN1 (ENSDLAG00005010091) pomgnt1 (ENSDLAG00005010107) ENSDLAG00005010180 ENSDLAG00005031434 ENSDLAG00005010194 ENSDLAG00005010201 RHPN1 (ENSDLAG00005010260) ENSDLAG00005010285 mafaa (ENSDLAG00005030978) ZC3H3 (ENSDLAG00005010316) ENSDLAG00005010349 ENSDLAG00005034029 Perciformes ANCESTRAL SPECIES 8 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Cottioidei ANCESTRAL SPECIES 5 ENSGT00940000157769 ENSGT00950000183111.b.a.b ENSGT00950000183039.B.b.c ENSGT00940000153421.a.a.a.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d ENSGT01030000234528.B.b.b.bb.a Stickleback MODERN SPECIES 8 ENSGACG00000004966 exoc2 (ENSGACG00000004977) foxq1b (ENSGACG00000005009) ENSGACG00000005011 foxc1b (ENSGACG00000005016) gmds (ENSGACG00000005020) ENSGACG00000005035 MYLK4 (ENSGACG00000005039) ENSGACG00000005049 TRMT1L (ENSGACG00000005050) niban1a (ENSGACG00000005076) kifap3a (ENSGACG00000005088) ntmt2 (ENSGACG00000005100) gorab (ENSGACG00000005104) prrx1b (ENSGACG00000005111) ENSGACG00000005129 ##22 MAST2 (ENSGACG00000005151) ENSGACG00000005179 PIK3R3 (ENSGACG00000005180) TSPAN1 (ENSGACG00000005195) pomgnt1 (ENSGACG00000005215) ENSGACG00000005243 gpx7 (ENSGACG00000005246) ENSGACG00000005282 RHPN1 (ENSGACG00000005320) atpaf1 (ENSGACG00000005332) mafaa (ENSGACG00000005347) ENSGACG00000005351 ENSGACG00000005353 ENSGACG00000005357 ENSGACG00000005364 Lumpfish DUPLICATION Lumpfish MODERN SPECIES 19 mep1ba (ENSCLMG00005010504) ENSCLMG00005010503 ENSCLMG00005010502 ENSCLMG00005010500 nrd1b (ENSCLMG00005009102) ENSCLMG00005009096 orc1 (ENSCLMG00005008836) prpf38a (ENSCLMG00005008823) ENSCLMG00005008813 TRMT1L (ENSCLMG00005008807) niban1a (ENSCLMG00005008686) kifap3a (ENSCLMG00005008607) ntmt2 (ENSCLMG00005008605) ENSCLMG00005008604 prrx1b (ENSCLMG00005008603) ENSCLMG00005008601 ##22 ENSCLMG00005008599 ##22 ENSCLMG00005008597 MAST2 (ENSCLMG00005006053) ENSCLMG00005006028 PIK3R3 (ENSCLMG00005005105) TSPAN1 (ENSCLMG00005005093) pomgnt1 (ENSCLMG00005005057) ENSCLMG00005005049 gpx7 (ENSCLMG00005005048) TUT4 (ENSCLMG00005003783) RHPN1 (ENSCLMG00005003769) atpaf1 (ENSCLMG00005003766) mafaa (ENSCLMG00005003765) ZC3H3 (ENSCLMG00005003764) ENSCLMG00005003741 Lumpfish MODERN SPECIES 19 ENSCLMG00005010503 ENSCLMG00005010502 ENSCLMG00005010500 nrd1b (ENSCLMG00005009102) ENSCLMG00005009096 orc1 (ENSCLMG00005008836) prpf38a (ENSCLMG00005008823) ENSCLMG00005008813 TRMT1L (ENSCLMG00005008807) niban1a (ENSCLMG00005008686) kifap3a (ENSCLMG00005008607) ntmt2 (ENSCLMG00005008605) ENSCLMG00005008604 prrx1b (ENSCLMG00005008603) ENSCLMG00005008601 ##22 ENSCLMG00005008599 ##22 ENSCLMG00005008597 MAST2 (ENSCLMG00005006053) ENSCLMG00005006028 PIK3R3 (ENSCLMG00005005105) TSPAN1 (ENSCLMG00005005093) pomgnt1 (ENSCLMG00005005057) ENSCLMG00005005049 gpx7 (ENSCLMG00005005048) TUT4 (ENSCLMG00005003783) RHPN1 (ENSCLMG00005003769) atpaf1 (ENSCLMG00005003766) mafaa (ENSCLMG00005003765) ZC3H3 (ENSCLMG00005003764) ENSCLMG00005003741 ENSCLMG00005003738 Perciformes_a ANCESTRAL SPECIES 6 ENSGT00950000182916.a.b.a.a.a.a.e.b ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Pike perch MODERN SPECIES 203 ENSSLUG00000016328 ENSSLUG00000016330 ENSSLUG00000016332 ENSSLUG00000016334 ENSSLUG00000016336 ENSSLUG00000016339 ENSSLUG00000016340 ENSSLUG00000016342 zgc:103559 (ENSSLUG00000016348) TRMT1L (ENSSLUG00000016365) niban1a (ENSSLUG00000016372) kifap3a (ENSSLUG00000016487) ntmt2 (ENSSLUG00000018843) gorab (ENSSLUG00000018848) prrx1b (ENSSLUG00000018855) ENSSLUG00000018882 ##22 ENSSLUG00000018904 ##22 MAST2 (ENSSLUG00000019061) Channel bull blenny MODERN SPECIES 18 ENSCGOG00000000369 ENSCGOG00000000376 ENSCGOG00000000381 ENSCGOG00000000385 ENSCGOG00000000386 ENSCGOG00000000387 ENSCGOG00000000390 ENSCGOG00000000391 prpf38a (ENSCGOG00000000397) TRMT1L (ENSCGOG00000000402) niban1a (ENSCGOG00000000421) kifap3a (ENSCGOG00000000499) ntmt2 (ENSCGOG00000000587) gorab (ENSCGOG00000000591) prrx1b (ENSCGOG00000000597) ENSCGOG00000000611 ##22 ENSCGOG00000000618 ##22 ENSCGOG00000000631 MAST2 (ENSCGOG00000000759) ENSCGOG00000001155 pomgnt1 (ENSCGOG00000001217) TSPAN1 (ENSCGOG00000001243) ENSCGOG00000001245 gpx7 (ENSCGOG00000001250) TUT4 (ENSCGOG00000001260) RHPN1 (ENSCGOG00000001518) atpaf1 (ENSCGOG00000001729) mafaa (ENSCGOG00000001737) ZC3H3 (ENSCGOG00000001742) ENSCGOG00000001749 ENSCGOG00000001755 Sarcopterygii ANCESTRAL SPECIES 273 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000154654 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00530000063604.B Tetrapoda ANCESTRAL SPECIES 251 ENSGT00940000160615.b.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00550000075090 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 Amniota ANCESTRAL SPECIES 99 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00390000008608 ENSGT00940000156906 Sauria ANCESTRAL SPECIES 7 ENSGT00390000007598 ENSGT00510000046975.b.p.b ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00390000008608 ENSGT00940000156906 ENSGT00390000001322 ENSGT00390000004199 ENSGT00940000163762.a.a Lepidosauria ANCESTRAL SPECIES 62 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00390000008608 ENSGT00940000156906 ENSGT00390000001322 ENSGT00390000004199 ENSGT00940000154374.b Episquamata ANCESTRAL SPECIES 1 ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00940000157769 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185631 ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 Laterata ANCESTRAL SPECIES 52 ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00940000157769 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185631 ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b Argentine black and white tegu MODERN SPECIES 20 ENSSMRG00000023536 ENSSMRG00000023533 ENSSMRG00000023532 ENSSMRG00000023531 TMEM121 (ENSSMRG00000023530) SPATA46 (ENSSMRG00000023528) ENSSMRG00000023527 ENSSMRG00000023526 UHMK1 (ENSSMRG00000023525) PIGC (ENSSMRG00000023523) SUCO (ENSSMRG00000023522) FASLG (ENSSMRG00000023521) ENSSMRG00000023520 ENSSMRG00000023519 PHGDH (ENSSMRG00000023518) ENSSMRG00000023517 ##22 ENSSMRG00000023515 ##22 ENSSMRG00000023514 ##22 PRKAB2 (ENSSMRG00000023513) FMO5 (ENSSMRG00000023510) PLPP6 (ENSSMRG00000023511) ALOX5 (ENSSMRG00000023509) CRIP2 (ENSSMRG00000023508) TMCO1 (ENSSMRG00000023507) ALDH9A1 (ENSSMRG00000023506) CRIP1 (ENSSMRG00000023505) FAM78B (ENSSMRG00000023504) MARCHF8 (ENSSMRG00000023503) ENSSMRG00000023501 MGME1 (ENSSMRG00000023500) OVOL2 (ENSSMRG00000023499) Common wall lizard MODERN SPECIES 14 ENSPMRG00000007530 ENSPMRG00000007526 UHMK1 (ENSPMRG00000007515) ENSPMRG00000007502 PIGC (ENSPMRG00000007496) ENSPMRG00000007493 ENSPMRG00000007490 SUCO (ENSPMRG00000007446) ENSPMRG00000007433 FASLG (ENSPMRG00000007422) ENSPMRG00000007413 ENSPMRG00000007396 ENSPMRG00000007388 HMGCS2 (ENSPMRG00000007370) PHGDH (ENSPMRG00000007329) ENSPMRG00000007307 ##22 ENSPMRG00000007288 ##22 PRKAB2 (ENSPMRG00000007267) FMO5 (ENSPMRG00000007256) PLPP6 (ENSPMRG00000007245) ENSPMRG00000007240 FAM78B (ENSPMRG00000007235) UCK2 (ENSPMRG00000007224) TMCO1 (ENSPMRG00000007212) ENSPMRG00000007203 ALDH9A1 (ENSPMRG00000007174) CRIP1 (ENSPMRG00000007150) CRIP2 (ENSPMRG00000007135) ENSPMRG00000007130 PDIA4 (ENSPMRG00000007115) GLRX5 (ENSPMRG00000007107) Toxicofera ANCESTRAL SPECIES 1 ENSGT00390000004199 ENSGT00940000165310 ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT01040000244782 ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 Elapidae ANCESTRAL SPECIES 1 ENSGT00940000165310 ENSGT00940000156906.f ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000160907 ENSGT00940000159284 Elapidae_a ANCESTRAL SPECIES 32 ENSGT00390000004199 ENSGT00940000165310 ENSGT00940000156906.f ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000160907 ENSGT00940000159284 Acanthophiinae ANCESTRAL SPECIES 33 ENSGT00390000004199 ENSGT00940000165310 ENSGT00940000156906.f ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00990000213446 ENSGT00940000160907 ENSGT00940000159284 Mainland tiger snake MODERN SPECIES 162 ENSNSUG00000010700 ENSNSUG00000010702 MGST3 (ENSNSUG00000010703) TMEM121 (ENSNSUG00000010704) ENSNSUG00000010705 ENSNSUG00000010708 PIGC (ENSNSUG00000010713) SUCO (ENSNSUG00000010720) ENSNSUG00000010776 FASLG (ENSNSUG00000010777) ENSNSUG00000010779 ENSNSUG00000010780 ENSNSUG00000010781 ENSNSUG00000010784 PHGDH (ENSNSUG00000010786) ENSNSUG00000010788 ##22 ENSNSUG00000010791 ##22 ENSNSUG00000010794 ##22 ENSNSUG00000010795 ENSNSUG00000010797 ENSNSUG00000010799 ENSNSUG00000010800 PRKAB2 (ENSNSUG00000010803) Lizard MODERN SPECIES 3 SERPINC1 (ENSACAG00000015348) RC3H1 (ENSACAG00000015271) RABGAP1L (ENSACAG00000015106) MRPS14 (ENSACAG00000023212) CACYBP (ENSACAG00000015077) TNN (ENSACAG00000015034) ENSACAG00000044109 KIAA0040 (ENSACAG00000044461) ENSACAG00000035234 TNR (ENSACAG00000014785) COP1 (ENSACAG00000014695) PAPPA2 (ENSACAG00000014663) ASTN1 (ENSACAG00000014579) BRINP2 (ENSACAG00000014442) ENSACAG00000041205 ENSACAG00000034940 ##22 ENSACAG00000013127 ##22 ENSACAG00000041180 ENSACAG00000013182 ENSACAG00000026209 ENSACAG00000013296 TMCO1 (ENSACAG00000013299) ENSACAG00000036468 ENSACAG00000044987 ENSACAG00000041628 FAM78B (ENSACAG00000013367) ENSACAG00000039957 ENSACAG00000013380 CRIP1 (ENSACAG00000027899) CRIP2 (ENSACAG00000013460) MTA1 (ENSACAG00000013501) tuatara MODERN SPECIES 746 BBLN (ENSSPUG00000015338) CIZ1 (ENSSPUG00000015347) DNM1 (ENSSPUG00000015376) ENSSPUG00000015440 SWI5 (ENSSPUG00000015500) TRUB2 (ENSSPUG00000015515) COQ4 (ENSSPUG00000015526) SLC27A4 (ENSSPUG00000015536) URM1 (ENSSPUG00000015548) CFAP157 (ENSSPUG00000015602) PTRH1 (ENSSPUG00000000040) SEC22B (ENSSPUG00000000051) NOTCH2 (ENSSPUG00000000062) HMGCS2 (ENSSPUG00000000080) PHGDH (ENSSPUG00000000175) ENSSPUG00000000396 ##22 ENSSPUG00000000416 ##22 PRKAB2 (ENSSPUG00000000426) ENSSPUG00000000433 SIM2 (ENSSPUG00000000454) ENSSPUG00000000498 ENSSPUG00000000519 PIGP (ENSSPUG00000000596) ENSSPUG00000000603 VPS26C (ENSSPUG00000000615) DYRK1A (ENSSPUG00000000621) KCNJ6 (ENSSPUG00000000631) KCNJ15 (ENSSPUG00000000634) ERG (ENSSPUG00000000653) ETS2 (ENSSPUG00000000684) Mammalia ANCESTRAL SPECIES 69 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b Platypus MODERN SPECIES 7 WARS2 (ENSOANG00000002254) HAO2 (ENSOANG00000043344) ENSOANG00000011957 ZNF697 (ENSOANG00000050352) PHGDH (ENSOANG00000015600) HMGCS2 (ENSOANG00000015590) ENSOANG00000040501 ENSOANG00000003271 ENSOANG00000046985 ENSOANG00000004530 ENSOANG00000047253 ENSOANG00000005495 ENSOANG00000005496 ENSOANG00000011144 SEC22B (ENSOANG00000045488) ENSOANG00000049943 ##22 ENSOANG00000042306 ##22 PRKAB2 (ENSOANG00000003233) FMO5 (ENSOANG00000045449) CHD1L (ENSOANG00000003068) BCL9 (ENSOANG00000043707) ENSOANG00000002805 GJA5 (ENSOANG00000008998) GJA8 (ENSOANG00000037589) ENSOANG00000009732 ENSOANG00000009733 PDZK1 (ENSOANG00000009734) DUSP12 (ENSOANG00000046788) ATF6 (ENSOANG00000009735) OLFML2B (ENSOANG00000047415) ENSOANG00000006737 Anura ANCESTRAL SPECIES 332 ENSGT00940000160615.b.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00550000075090 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 Frog MODERN SPECIES 4 ENSXETG00000046795 ENSXETG00000048626 ENSXETG00000042835 rgs18 (ENSXETG00000026662) rgs21 (ENSXETG00000035089) ENSXETG00000045757 rgs1 (ENSXETG00000005674) rgs13 (ENSXETG00000036070) rgs2 (ENSXETG00000005675) naaa (ENSXETG00000017223) ro60 (ENSXETG00000017224) notch2 (ENSXETG00000017225) sec22b (ENSXETG00000025777) imp3 (ENSXETG00000038538) prkab2 (ENSXETG00000036380) ENSXETG00000048243 ##22 pde4dip (ENSXETG00000010192) ##22 prrx1 (ENSXETG00000004727) gorab (ENSXETG00000037580) ENSXETG00000048083 ENSXETG00000034511 ntmt2 (ENSXETG00000004731) ENSXETG00000024774 kifap3 (ENSXETG00000004733) scyl3 (ENSXETG00000004735) c1orf112 (ENSXETG00000004738) ENSXETG00000004740 selp (ENSXETG00000004741) SELE (ENSXETG00000048520) ENSXETG00000034276 atf6 (ENSXETG00000004747) Gnathostomata ANCESTRAL SPECIES 12 ENSGT00940000161173 ENSGT00940000158069 ENSGT00950000183179.a ENSGT00940000158333 ENSGT00530000063843.b ENSGT00940000173158 ENSGT00940000154654 ENSGT01030000234606.b ENSGT00390000010743.a ENSGT00940000156236 ENSGT00390000012568 ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.b.a.b ##22 ENSGT00940000159284 ENSGT00930000151043 ENSGT00390000004791 ENSGT00390000002738.b ENSGT00940000160168 Euteleostomi ANCESTRAL SPECIES 84 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00940000159391 ENSGT00390000014594 ENSGT00390000014781 ENSGT01030000234558.C ENSGT00940000156012 ENSGT00390000014243 ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00390000010743.a ENSGT01030000234606.b ENSGT00940000154654 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00530000063604.B Actinopterygii ANCESTRAL SPECIES 84 ENSGT00940000156236 ENSGT00390000010743.a ENSGT01030000234606.b ENSGT00940000154654 ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00390000013877 ENSGT01030000234618.B ENSGT00940000165818 ENSGT00560000078707 ENSGT00940000159244 Reedfish MODERN SPECIES 1 pdcb (ENSECRG00000013241) ptgs2b (ENSECRG00000013201) ENSECRG00000013186 pla2g4aa (ENSECRG00000013153) arpc5a (ENSECRG00000013132) ENSECRG00000012963 ivns1abpb (ENSECRG00000012861) SWT1 (ENSECRG00000012822) TRMT1L (ENSECRG00000012794) rnf2 (ENSECRG00000012765) niban1a (ENSECRG00000012729) kifap3b (ENSECRG00000012631) ntmt2 (ENSECRG00000012586) gorab (ENSECRG00000012565) prrx1b (ENSECRG00000012545) PDE4DIP (ENSECRG00000012215) ##22 PRKAB2 (ENSECRG00000012088) ENSECRG00000012074 ENSECRG00000012051 ENSECRG00000012041 ENSECRG00000011998 ncf2 (ENSECRG00000011944) smg7 (ENSECRG00000011797) nmnat2 (ENSECRG00000011748) ENSECRG00000011712 LAMC1 (ENSECRG00000011672) dhx9 (ENSECRG00000011613) ENSECRG00000011576 RASAL2 (ENSECRG00000011493) ENSECRG00000011441 ankrd45 (ENSECRG00000011422) Neopterygii ANCESTRAL SPECIES 78 ENSGT00940000156236 ENSGT00390000010743.a ENSGT01030000234606.b ENSGT00940000154654 ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000166185 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00390000013877 ENSGT01030000234618.B ENSGT00940000165818 ENSGT00560000078707 Osteoglossocephalai ANCESTRAL SPECIES 150 ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a.g.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000156132.g Osteoglossiformes DUPLICATION Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 51 ENSGT00930000151041 ENSGT00940000166019.p ENSGT00530000063751.a.b ENSGT00730000111014.m ENSGT00390000012568 ENSGT00940000156236.b ENSGT00390000010743.a.b ENSGT01030000234606.b.e.a ENSGT00940000154654.a.b ENSGT00940000155635.db ENSGT00940000154149.b.a.g.a ENSGT00390000003574.c ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.a.a ##22 ENSGT00940000159284 ENSGT00940000156132.g ENSGT00730000111085.B.k ENSGT00940000157064.a.b.a ENSGT00390000004674.k.a ENSGT00940000157607.m.a ENSGT00940000177587 ENSGT00940000154667.b.b ENSGT00940000165672 ENSGT00940000155561.k ENSGT00950000182975.a.a.a.a.b ENSGT00940000153391.c.b.b.i.a.a ENSGT00940000156725.b ENSGT00940000158821.i ENSGT00940000155152.f.a Asian bonytongue MODERN SPECIES 18 ENSSFOG00015024808 otos (ENSSFOG00015010657) cops9 (ENSSFOG00015027033) and2 (ENSSFOG00015010681) adipoqb (ENSSFOG00015010696) tmtopsb (ENSSFOG00015010704) ENSSFOG00015010731 tfr1a (ENSSFOG00015010794) ENSSFOG00015010836 CAPN10 (ENSSFOG00015010857) eif4e2 (ENSSFOG00015010899) ENSSFOG00015010963 kifap3b (ENSSFOG00015011035) gorab (ENSSFOG00015011069) prrx1a (ENSSFOG00015011095) ENSSFOG00015011132 ##22 PRKAB2 (ENSSFOG00015011191) eeig2a (ENSSFOG00015011213) ENSSFOG00015011251 ENSSFOG00015011293 stxbp3 (ENSSFOG00015011374) ENSSFOG00015011433 ENSSFOG00015011454 ENSSFOG00015011521 WDR47 (ENSSFOG00015011555) CAMSAP2 (ENSSFOG00015011601) nr5a2 (ENSSFOG00015003694) nek7 (ENSSFOG00015011686) lhx9 (ENSSFOG00015003455) ENSSFOG00015011726 ZBTB41 (ENSSFOG00015011752) P. kingsleyae MODERN SPECIES 81 dusp12 (ENSPKIG00000016247) ENSPKIG00000016288 ENSPKIG00000016345 prg4a (ENSPKIG00000016371) TPR (ENSPKIG00000016416) odr4 (ENSPKIG00000016551) PDC (ENSPKIG00000016703) ptgs2a (ENSPKIG00000016720) pla2g4aa (ENSPKIG00000016752) arpc5a (ENSPKIG00000016790) ivns1abpb (ENSPKIG00000016869) ENSPKIG00000016968 kifap3b (ENSPKIG00000017032) gorab (ENSPKIG00000017073) prrx1a (ENSPKIG00000017092) ENSPKIG00000017105 ##22 ENSPKIG00000017136 ##22 PRKAB2 (ENSPKIG00000017163) EEIG2 (ENSPKIG00000017219) ENSPKIG00000017291 stxbp3 (ENSPKIG00000017341) ENSPKIG00000017437 FNDC7 (ENSPKIG00000017510) ENSPKIG00000017591 ENSPKIG00000017633 ENSPKIG00000017723 WDR47 (ENSPKIG00000017780) CAMSAP2 (ENSPKIG00000017872) nr5a2 (ENSPKIG00000017971) nek7 (ENSPKIG00000018005) LHX9 (ENSPKIG00000018033) Osteoglossiformes ANCESTRAL SPECIES 5 ENSGT00530000063751.a.a ENSGT00730000111014.n ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.a ENSGT00940000164697.b ENSGT00940000154614 ENSGT00940000155635.eb ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a.g.b ENSGT00390000003574.d ENSGT00390000008371.a ENSGT00950000183190.a.a.b.a.b ##22 ENSGT00940000164927 ENSGT00940000156132.h ENSGT00390000004798 ENSGT00730000111085.B.l ENSGT00390000004674.k.b ENSGT00940000157607.n ENSGT00940000154667.b.a ENSGT00940000155561.l ENSGT00950000182975.a.a.a.a.a ENSGT00940000158639 ENSGT00940000156834 ENSGT00940000161534 ENSGT00940000153391.c.b.b.i.b ENSGT00940000153391.c.b.b.i.a.b ENSGT00940000159457 P. kingsleyae MODERN SPECIES 75 TPR (ENSPKIG00000006968) PDC (ENSPKIG00000006842) ptgs2b (ENSPKIG00000006786) PLA2G4A (ENSPKIG00000006741) PLA2G4A (ENSPKIG00000006448) ARPC5 (ENSPKIG00000006321) HMCN1 (ENSPKIG00000006151) IVNS1ABP (ENSPKIG00000006021) ENSPKIG00000005979 TRMT1L (ENSPKIG00000005941) rnf2 (ENSPKIG00000005901) NIBAN1 (ENSPKIG00000005832) KIFAP3 (ENSPKIG00000005784) ntmt2 (ENSPKIG00000005754) prrx1b (ENSPKIG00000005726) ENSPKIG00000005176 ##22 slc25a24 (ENSPKIG00000004963) fam102bb (ENSPKIG00000004892) henmt1 (ENSPKIG00000004845) ENSPKIG00000004815 ENSPKIG00000004794 ENSPKIG00000004783 ENSPKIG00000004762 ENSPKIG00000004743 FNDC7 (ENSPKIG00000004693) stxbp3 (ENSPKIG00000004597) ENSPKIG00000004539 WDR47 (ENSPKIG00000004492) camsap2a (ENSPKIG00000004415) ddx59 (ENSPKIG00000004361) kif14 (ENSPKIG00000004304) Asian bonytongue MODERN SPECIES 24 TPR (ENSSFOG00015005315) ENSSFOG00015005299 ptgs2b (ENSSFOG00015005265) PLA2G4A (ENSSFOG00015005213) ENSSFOG00015005195 HMCN1 (ENSSFOG00015004942) IVNS1ABP (ENSSFOG00015004910) ENSSFOG00015004895 TRMT1L (ENSSFOG00015004878) rnf2 (ENSSFOG00015004836) niban1a (ENSSFOG00015004827) KIFAP3 (ENSSFOG00015004760) ntmt2 (ENSSFOG00015032658) prrx1b (ENSSFOG00015032140) ENSSFOG00015028306 ##22 ENSSFOG00015004636 ##22 slc25a24 (ENSSFOG00015004547) fam102bb (ENSSFOG00015004479) henmt1 (ENSSFOG00015032683) ENSSFOG00015004405 FNDC7 (ENSSFOG00015004287) ENSSFOG00015004252 ENSSFOG00015004201 WDR47 (ENSSFOG00015004135) camsap2a (ENSSFOG00015004040) ddx59 (ENSSFOG00015003999) kif14 (ENSSFOG00015003775) ENSSFOG00015032583 nr5a2 (ENSSFOG00015011650) PTPRC (ENSSFOG00015003517) PTPRC (ENSSFOG00015026618) Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.b ##22 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 88 rbm18 (ENSPKIG00000005430) mrrf (ENSPKIG00000005396) ENSPKIG00000005365 ptgs1 (ENSPKIG00000005344) pdcl (ENSPKIG00000005321) ENSPKIG00000005307 inpp5e (ENSPKIG00000005282) ENSPKIG00000005095 notch1a (ENSPKIG00000004878) camsap1b (ENSPKIG00000004720) KCNT1 (ENSPKIG00000004391) B3GALT9 (ENSPKIG00000004266) #19 ENSPKIG00000004253 psmd5 (ENSPKIG00000004218) #18 col27a1b (ENSPKIG00000025360) ENSPKIG00000025345 ##22 NUP188 (ENSPKIG00000025335) dolk (ENSPKIG00000025330) phyhd1 (ENSPKIG00000025327) lrrc8aa (ENSPKIG00000025321) dnlz (ENSPKIG00000025315) uck1 (ENSPKIG00000025313) rapgef1b (ENSPKIG00000025229) NTNG2 (ENSPKIG00000025184) SETX (ENSPKIG00000025162) dolpp1 (ENSPKIG00000025145) miga2 (ENSPKIG00000025123) st6galnac4 (ENSPKIG00000025112) ST6GALNAC6 (ENSPKIG00000025105) spout1 (ENSPKIG00000025099) kyat1 (ENSPKIG00000025085) P. kingsleyae MODERN SPECIES 81 ENSPKIG00000016288 ENSPKIG00000016345 prg4a (ENSPKIG00000016371) TPR (ENSPKIG00000016416) odr4 (ENSPKIG00000016551) PDC (ENSPKIG00000016703) ptgs2a (ENSPKIG00000016720) pla2g4aa (ENSPKIG00000016752) arpc5a (ENSPKIG00000016790) ivns1abpb (ENSPKIG00000016869) ENSPKIG00000016968 kifap3b (ENSPKIG00000017032) gorab (ENSPKIG00000017073) prrx1a (ENSPKIG00000017092) ENSPKIG00000017105 ##22 ENSPKIG00000017136 ##22 PRKAB2 (ENSPKIG00000017163) EEIG2 (ENSPKIG00000017219) ENSPKIG00000017291 stxbp3 (ENSPKIG00000017341) ENSPKIG00000017437 FNDC7 (ENSPKIG00000017510) ENSPKIG00000017591 ENSPKIG00000017633 ENSPKIG00000017723 WDR47 (ENSPKIG00000017780) CAMSAP2 (ENSPKIG00000017872) nr5a2 (ENSPKIG00000017971) nek7 (ENSPKIG00000018005) LHX9 (ENSPKIG00000018033) ENSPKIG00000018060 Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 126 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.a ENSGT00940000157064.a.b.a ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m Otomorpha ANCESTRAL SPECIES 814 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 Otophysi ANCESTRAL SPECIES 625 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 Characiphysae ANCESTRAL SPECIES 215 ENSGT00940000165115.b ENSGT00940000153617.A.a.b.a ENSGT00940000161210 ENSGT00950000183104.B.a.b.a.a.d ENSGT00940000163250.C ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 Channel catfish MODERN SPECIES 12 ENSIPUG00000017050 ENSIPUG00000016998 abhd8 (ENSIPUG00000016953) ENSIPUG00000016937 capsla (ENSIPUG00000016920) ranbp3 (ENSIPUG00000016831) ENSIPUG00000016815 pnhd (ENSIPUG00000016792) admp (ENSIPUG00000016781) ENSIPUG00000016727 PTPRS (ENSIPUG00000016658) FEM1A (ENSIPUG00000016646) ENSIPUG00000016618 Harbi1 (ENSIPUG00000016605) ENSIPUG00000016596 ENSIPUG00000016556 ##22 PRKAB2 (ENSIPUG00000016527) ENSIPUG00000016488 piwil1 (ENSIPUG00000016443) sdhc (ENSIPUG00000016379) cadm3 (ENSIPUG00000016275) KIRREL (ENSIPUG00000016174) epc1b (ENSIPUG00000016101) arhgap12a (ENSIPUG00000016023) ZEB1 (ENSIPUG00000015972) ENSIPUG00000015923 ENSIPUG00000015909 ENSIPUG00000015899 ENSIPUG00000015889 cactin (ENSIPUG00000015862) sema4e (ENSIPUG00000015842) Characiphysae_b ANCESTRAL SPECIES 201 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00950000183102.B ENSGT00940000165656 ENSGT00530000063841.b.b ENSGT00940000154737.c.g ENSGT00940000164939.a.b ENSGT01040000240444.A.b.a.b ENSGT00940000159170.d ENSGT00940000155854.a.b ENSGT00940000164811.a.b.b ENSGT00940000164927.b ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b Electric eel MODERN SPECIES 1103 ENSEEEG00000003711 ENSEEEG00000003707 ##22 ENSEEEG00000003705 ##22 PRKAB2 (ENSEEEG00000003694) cactin (ENSEEEG00000003687) sema4e (ENSEEEG00000003685) Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.c.a ##22 Cyprininae ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.c.a ##22 Goldfish MODERN SPECIES 11 CTXN1 (ENSCARG00000001212) rab11bb (ENSCARG00000001208) ENSCARG00000001128 gpx4b (ENSCARG00000001104) POLR2E (ENSCARG00000001077) ARHGAP45 (ENSCARG00000000949) sbno2a (ENSCARG00000000858) BTBD2 (ENSCARG00000000748) ARMC6 (ENSCARG00000000725) slc25a42 (ENSCARG00000000711) eef2b (ENSCARG00000000613) epb41l3b (ENSCARG00000000497) ENSCARG00000000462 ENSCARG00000000455 cirbpa (ENSCARG00000000448) ENSCARG00000000434 ##22 PRKAB2 (ENSCARG00000000420) stk11 (ENSCARG00000000413) CBARP (ENSCARG00000000406) ENSCARG00000000398 ENSCARG00000000364 ENSCARG00000000315 ENSCARG00000000305 cirbpa (ENSCARG00000000293) YJEFN3 (ENSCARG00000000273) NDUFA13 (ENSCARG00000000265) ENSCARG00000000256 MAU2 (ENSCARG00000000206) ENSCARG00000049742 PTPRS (ENSCARG00000042166) ENSCARG00000041925 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.c.a ##22 Common carp reference MODERN SPECIES 21 ENSCCRG00000068972 ENSCCRG00000081571 ENSCCRG00000056436 ENSCCRG00000081779 ENSCCRG00000059936 ENSCCRG00000078780 ENSCCRG00000071613 ENSCCRG00000081485 ENSCCRG00000055222 ENSCCRG00000033301 ENSCCRG00000078008 ENSCCRG00000048853 ENSCCRG00000071869 ENSCCRG00000066326 ENSCCRG00000081944 ENSCCRG00000057048 ##22 ENSCCRG00000046138 Golden-line barbel MODERN SPECIES 870 ENSSGRG00000050191 PTPRS (ENSSGRG00000045031) ENSSGRG00000044893 ##22 PRKAB2 (ENSSGRG00000044889) ENSSGRG00000044887 ift74 (ENSSGRG00000044815) tek (ENSSGRG00000044509) ENSSGRG00000044482 THAP1 (ENSSGRG00000044480) june (ENSSGRG00000044479) Clupeiformes ANCESTRAL SPECIES 335 ENSGT00950000183102.B ENSGT00940000165656 ENSGT00530000063841.b.b ENSGT00940000154737.c.g ENSGT00940000164939.a.b ENSGT01040000240444.A.b.a.b ENSGT00940000159170.d ENSGT00940000155854.a.b ENSGT00940000165115.b ENSGT00940000153617.A.a.b ENSGT00940000161210 ENSGT00950000183104.B.a.b.a.a.d ENSGT00940000163250.C ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 14 cactin (ENSDCDG00000035615) ENSDCDG00000035621 stap2a (ENSDCDG00000000183) sh3gl1a (ENSDCDG00000000204) rorcb (ENSDCDG00000000364) ENSDCDG00000000447 SEMA6B (ENSDCDG00000000459) abhd17aa (ENSDCDG00000000479) ENSDCDG00000000502 PTPRS (ENSDCDG00000001350) FEM1A (ENSDCDG00000020218) ENSDCDG00000020225 ENSDCDG00000020277 ENSDCDG00000020281 ##22 ENSDCDG00000020282 ##22 ENSDCDG00000020284 ##22 PRKAB2 (ENSDCDG00000020287) ENSDCDG00000020289 CTXN1 (ENSDCDG00000020291) TIMM44 (ENSDCDG00000020293) rab11bb (ENSDCDG00000020298) PIP5K1C (ENSDCDG00000020330) gpx4b (ENSDCDG00000021692) polr2eb (ENSDCDG00000021709) ARHGAP45 (ENSDCDG00000021926) sbno2a (ENSDCDG00000021954) tm6sf2a (ENSDCDG00000021974) ENSDCDG00000021977 slc25a42 (ENSDCDG00000022012) ARMC6 (ENSDCDG00000022034) ENSDCDG00000022030 Denticle herring MODERN SPECIES 14 ENSDCDG00000035611 cactin (ENSDCDG00000035615) ENSDCDG00000035621 stap2a (ENSDCDG00000000183) sh3gl1a (ENSDCDG00000000204) rorcb (ENSDCDG00000000364) ENSDCDG00000000447 SEMA6B (ENSDCDG00000000459) abhd17aa (ENSDCDG00000000479) ENSDCDG00000000502 PTPRS (ENSDCDG00000001350) FEM1A (ENSDCDG00000020218) ENSDCDG00000020225 ENSDCDG00000020277 ENSDCDG00000020281 ##22 ENSDCDG00000020282 ##22 ENSDCDG00000020284 ##22 PRKAB2 (ENSDCDG00000020287) ENSDCDG00000020289 CTXN1 (ENSDCDG00000020291) TIMM44 (ENSDCDG00000020293) rab11bb (ENSDCDG00000020298) PIP5K1C (ENSDCDG00000020330) gpx4b (ENSDCDG00000021692) polr2eb (ENSDCDG00000021709) ARHGAP45 (ENSDCDG00000021926) sbno2a (ENSDCDG00000021954) tm6sf2a (ENSDCDG00000021974) ENSDCDG00000021977 slc25a42 (ENSDCDG00000022012) ARMC6 (ENSDCDG00000022034) Atlantic herring MODERN SPECIES 14 ENSCHAG00000021103 cactin (ENSCHAG00000021108) sema4e (ENSCHAG00000021141) stap2a (ENSCHAG00000021258) sh3gl1a (ENSCHAG00000021296) rorcb (ENSCHAG00000021312) ENSCHAG00000021447 SEMA6B (ENSCHAG00000021456) abhd17aa (ENSCHAG00000002485) PTPRS (ENSCHAG00000003624) ENSCHAG00000019222 FEM1A (ENSCHAG00000019234) fzr1a (ENSCHAG00000019246) ENSCHAG00000019483 ENSCHAG00000019489 ##22 ENSCHAG00000019514 ##22 PRKAB2 (ENSCHAG00000019528) FUT9 (ENSCHAG00000019551) ENSCHAG00000019883 ENSCHAG00000026841 grhprb (ENSCHAG00000026844) ENSCHAG00000026853 polr1e (ENSCHAG00000026854) FBXO10 (ENSCHAG00000026857) ENSCHAG00000026870 chrnb3a (ENSCHAG00000026893) chrna6 (ENSCHAG00000026897) ENSCHAG00000026899 ENSCHAG00000026908 ENSCHAG00000026912 ENSCHAG00000026921 Euteleosteomorpha ANCESTRAL SPECIES 64 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00990000204320 ENSGT01020000230600 Protacanthopterygii ANCESTRAL SPECIES 43 ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000163253.b.c.a.b ENSGT01030000234567.B.a.a.b.b.a.a ENSGT00940000165622.i.a ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g.c ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00990000204320 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 111 ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00390000004674.i.a.h ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279 ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 ENSGT00940000157183.b.e Huchen MODERN SPECIES 231 ENSHHUG00000027105 MAU2 (ENSHHUG00000027118) SLC25A42 (ENSHHUG00000027205) ENSHHUG00000027216 ENSHHUG00000027246 ##22 ENSHHUG00000027236 ##22 ENSHHUG00000027249 ##22 PRKAB2 (ENSHHUG00000027255) ENSHHUG00000027264 eeig2a (ENSHHUG00000027298) ENSHHUG00000027304 ENSHHUG00000027315 ENSHHUG00000027324 ENSHHUG00000027340 WDR47 (ENSHHUG00000027345) CAMSAP2 (ENSHHUG00000027351) ENSHHUG00000027376 CAPN10 (ENSHHUG00000027384) eif4e2 (ENSHHUG00000027391) ENSHHUG00000027404 ENSHHUG00000027416 COPS7B (ENSHHUG00000027431) Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000164164.c ENSGT00940000156911.j.b ENSGT00940000162992.f ENSGT00940000158186.g.c ENSGT00390000015162.e.a.a ENSGT00940000158156.b.a.e ENSGT00940000154621.a.b.b.b.e ENSGT00940000156744.o.a.a ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00390000004674.i.a.h ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279.a ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 ENSGT00940000157183.b.e Oncorhynchus ANCESTRAL SPECIES 725 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 Oncorhynchus_a ANCESTRAL SPECIES 845 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 Chinook salmon MODERN SPECIES 20 nkain4 (ENSOTSG00005016396) ENSOTSG00005016404 YTHDF1 (ENSOTSG00005016406) oxsr1a (ENSOTSG00005016409) FUBP3 (ENSOTSG00005016778) slc17a9b (ENSOTSG00005017253) gid8b (ENSOTSG00005017255) atp6ap1lb (ENSOTSG00005017256) ENSOTSG00005017257 ENSOTSG00005017258 ENSOTSG00005017259 ENSOTSG00005017261 ##22 ENSOTSG00005017262 ##22 PRKAB2 (ENSOTSG00005017266) ENSOTSG00005017268 eeig2a (ENSOTSG00005017528) prpf38b (ENSOTSG00005017529) ENSOTSG00005003035 ENSOTSG00005003044 WDR47 (ENSOTSG00005003065) CAMSAP2 (ENSOTSG00005003119) rnf114 (ENSOTSG00005003126) spata2 (ENSOTSG00005003128) ENSOTSG00005003133 aar2 (ENSOTSG00005003137) prpf6 (ENSOTSG00005003142) ENSOTSG00005003147 Salmo ANCESTRAL SPECIES 5 ENSGT00940000156911.j.b ENSGT00940000162992.f ENSGT00940000158186.g.c ENSGT00390000015162.e.a.a ENSGT00940000158156.b.a.e ENSGT00940000165636.c ENSGT00940000154621.a.b.b.b.e ENSGT00940000156744.o.a.a ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00390000004674.i.a.h ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279.a ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 ENSGT00940000157183.b.e ENSGT00940000157155.z River trout MODERN SPECIES 24 bhlhe23 (ENSSTUG00000014469) slc17a9b (ENSSTUG00000018656) gid8b (ENSSTUG00000018628) atp6ap1lb (ENSSTUG00000018619) ENSSTUG00000018616 oxsr1a (ENSSTUG00000017902) ENSSTUG00000017741 ENSSTUG00000016974 zp2l2 (ENSSTUG00000016856) cirbpa (ENSSTUG00000016842) NDUFA13 (ENSSTUG00000016829) ENSSTUG00000016817 MAU2 (ENSSTUG00000016679) ENSSTUG00000016635 ENSSTUG00000016614 ##22 ENSSTUG00000016605 ##22 PRKAB2 (ENSSTUG00000016582) ENSSTUG00000016540 EEIG2 (ENSSTUG00000016529) ENSSTUG00000016500 ENSSTUG00000016479 ENSSTUG00000016413 WDR47 (ENSSTUG00000016219) ENSSTUG00000016200 CAMSAP2 (ENSSTUG00000016170) ENSSTUG00000016151 CAPN10 (ENSSTUG00000015949) eif4e2 (ENSSTUG00000015928) ENSSTUG00000015901 ENSSTUG00000015882 COPS7B (ENSSTUG00000015876) Salmoninae ANCESTRAL SPECIES 239 ENSGT00940000158050.h.a.a ENSGT00390000009230.b.e ENSGT00510000049027.d ENSGT01030000234567.B.a.a.b.b.a.a ENSGT00940000163253.b.c.a.b.b ENSGT00940000165622.i.a.b ENSGT00390000007227.b.ab ENSGT00390000000719.u.b ENSGT00390000004097.a.f.c ENSGT00390000012198.b.a.b ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.j ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b.m ##22 ENSGT00950000183190.a.a.b.c.a.d ##22 ENSGT00940000159284.n ENSGT00940000164927.b.f ENSGT00940000156132.g.d ENSGT00730000111085.B.j ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a.g ENSGT00940000154667.b.b.f ENSGT00940000155561.m.c ENSGT00950000182975.a.a.a.a.b.b ENSGT00990000204320 Huchen MODERN SPECIES 2412 ENSHHUG00000038268 tm6sf2a (ENSHHUG00000038277) ENSHHUG00000038297 ##22 ENSHHUG00000038305 ##22 Salmoninae_a ANCESTRAL SPECIES 51 ENSGT00390000009230.b.e ENSGT00510000049027.d ENSGT01030000234567.B.a.a.b.b.a.a.b ENSGT00940000163253.b.c.a.b.b ENSGT01030000234567.B.a.a.b.b.a.a.a ENSGT00940000165622.i.a.b ENSGT00390000007227.b.ab ENSGT00390000000719.u.b ENSGT00390000004097.a.f.c ENSGT00390000012198.b.a.b ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.j ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b.m ##22 ENSGT00950000183190.a.a.b.c.a.d ##22 ENSGT00940000159284.n ENSGT00940000164927.b.f ENSGT00940000156132.g.d ENSGT00730000111085.B.j ENSGT00940000157064.a.b.b.a.b ENSGT01060000251220 ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a.g ENSGT00940000154667.b.b.f ENSGT00940000155561.m.c ENSGT00950000182975.a.a.a.a.b.b ENSGT00990000204320 ENSGT01000000216279.b ENSGT00940000160041 ENSGT00940000157183.b.f Oncorhynchus ANCESTRAL SPECIES 46 ENSGT00510000049027.d ENSGT01030000234567.B.a.a.b.b.a.a.b ENSGT00940000163253.b.c.a.b.b ENSGT01030000234567.B.a.a.b.b.a.a.a ENSGT00940000165622.i.a.b ENSGT00940000153524.c.f.b ENSGT00390000007227.b.ab ENSGT00390000000719.u.b ENSGT00390000004097.a.f.c ENSGT00390000012198.b.a.b ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.j ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b.m ##22 ENSGT00950000183190.a.a.b.c.a.d ##22 ENSGT00940000159284.n ENSGT00940000164927.b.f ENSGT00940000156132.g.d ENSGT00730000111085.B.j ENSGT00940000157064.a.b.b.a.b ENSGT01060000251220 ENSGT00940000157064.a.b.b.a.a ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a.g ENSGT00940000154667.b.b.f ENSGT00940000155561.m.c ENSGT00950000182975.a.a.a.a.b.b ENSGT00990000204320 ENSGT01000000216279.b ENSGT00940000160041 Oncorhynchus_a ANCESTRAL SPECIES 56 ENSGT00510000049027.d ENSGT01030000234567.B.a.a.b.b.a.a.b ENSGT00940000163253.b.c.a.b.b ENSGT01030000234567.B.a.a.b.b.a.a.a ENSGT00940000165622.i.a.b ENSGT00940000153524.c.f.b ENSGT00390000007227.b.ab ENSGT00390000000719.u.b ENSGT00390000004097.a.f.c ENSGT00390000012198.b.a.b ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.j ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b.m ##22 ENSGT00950000183190.a.a.b.c.a.d ##22 ENSGT00940000159284.n ENSGT00940000164927.b.f ENSGT00940000156132.g.d ENSGT00730000111085.B.j ENSGT00940000157064.a.b.b.a.b ENSGT01060000251220 ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a.g ENSGT00940000154667.b.b.f ENSGT00940000155561.m.c ENSGT00950000182975.a.a.a.a.b.b ENSGT00990000204320 ENSGT01000000216279.b ENSGT00940000160041 ENSGT00940000157183.b.f Coho salmon DUPLICATION Coho salmon MODERN SPECIES 23 ENSOKIG00005024194 ENSOKIG00005024199 ENSOKIG00005024217 ENSOKIG00005024320 ENSOKIG00005024598 ENSOKIG00005024876 NDUFA13 (ENSOKIG00005024891) ENSOKIG00005024908 MAU2 (ENSOKIG00005024928) ARMC6 (ENSOKIG00005025081) SLC25A42 (ENSOKIG00005025113) ENSOKIG00005025211 ENSOKIG00005025248 tm6sf2a (ENSOKIG00005025267) ENSOKIG00005025312 ##22 ENSOKIG00005025327 ##22 ENSOKIG00005025352 ##22 ENSOKIG00005025379 ENSOKIG00005025418 ENSOKIG00005025628 ENSOKIG00005025656 ENSOKIG00005025722 ENSOKIG00005025756 FNDC7 (ENSOKIG00005025860) WDR47 (ENSOKIG00005025924) ENSOKIG00005026032 CAMSAP2 (ENSOKIG00005026079) ccl20a.3 (ENSOKIG00005026106) ccl20a.3 (ENSOKIG00005026114) ENSOKIG00005026131 chrng (ENSOKIG00005026165) Coho salmon MODERN SPECIES 23 ENSOKIG00005024199 ENSOKIG00005024217 ENSOKIG00005024320 ENSOKIG00005024598 ENSOKIG00005024876 NDUFA13 (ENSOKIG00005024891) ENSOKIG00005024908 MAU2 (ENSOKIG00005024928) ARMC6 (ENSOKIG00005025081) SLC25A42 (ENSOKIG00005025113) ENSOKIG00005025211 ENSOKIG00005025248 tm6sf2a (ENSOKIG00005025267) ENSOKIG00005025312 ##22 ENSOKIG00005025327 ##22 ENSOKIG00005025352 ##22 ENSOKIG00005025379 ENSOKIG00005025418 ENSOKIG00005025628 ENSOKIG00005025656 ENSOKIG00005025722 ENSOKIG00005025756 FNDC7 (ENSOKIG00005025860) WDR47 (ENSOKIG00005025924) ENSOKIG00005026032 CAMSAP2 (ENSOKIG00005026079) ccl20a.3 (ENSOKIG00005026106) ccl20a.3 (ENSOKIG00005026114) ENSOKIG00005026131 chrng (ENSOKIG00005026165) alg3 (ENSOKIG00005026338) Salmo ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.c.a.d ##22 River trout MODERN SPECIES 13 ENSSTUG00000042453 ENSSTUG00000042472 ENSSTUG00000042522 ENSSTUG00000042759 ENSSTUG00000043586 ENSSTUG00000043723 YJEFN3 (ENSSTUG00000043746) NDUFA13 (ENSSTUG00000043802) GATAD2A (ENSSTUG00000043827) MAU2 (ENSSTUG00000043866) ARMC6 (ENSSTUG00000043983) SLC25A42 (ENSSTUG00000044005) ENSSTUG00000044045 tm6sf2a (ENSSTUG00000044061) ENSSTUG00000044082 ##22 ENSSTUG00000044085 ##22 ENSSTUG00000044096 ENSSTUG00000044100 ENSSTUG00000044106 ENSSTUG00000044119 ENSSTUG00000044134 ENSSTUG00000044167 ENSSTUG00000044312 FNDC7 (ENSSTUG00000023266) ENSSTUG00000023287 WDR47 (ENSSTUG00000023363) ENSSTUG00000023608 ccl20a.3 (ENSSTUG00000023659) ENSSTUG00000023720 chrng (ENSSTUG00000023761) ENSSTUG00000024941 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 488 ENSHCOG00000001200 SUGP1 (ENSHCOG00000001195) ENSHCOG00000001186 stk11 (ENSHCOG00000001184) ENSHCOG00000001177 ENSHCOG00000001174 cirbpa (ENSHCOG00000001170) NDUFA13 (ENSHCOG00000001161) ENSHCOG00000001156 ARMC6 (ENSHCOG00000001149) SLC25A42 (ENSHCOG00000001141) ENSHCOG00000001136 tm6sf2a (ENSHCOG00000001130) ENSHCOG00000001125 ENSHCOG00000001122 ##22 ENSHCOG00000001107 ##22 PRKAB2 (ENSHCOG00000001092) ENSHCOG00000001081 eeig2a (ENSHCOG00000001076) ENSHCOG00000001071 ENSHCOG00000001068 ENSHCOG00000001060 ENSHCOG00000001039 ENSHCOG00000001026 ENSHCOG00000001022 ENSHCOG00000001015 WDR47 (ENSHCOG00000001011) CAMSAP2 (ENSHCOG00000001003) ENSHCOG00000000991 ENSHCOG00000000987 CAPN10 (ENSHCOG00000000983) Tiger tail seahorse MODERN SPECIES 488 ENSHCOG00000001205 ENSHCOG00000001200 SUGP1 (ENSHCOG00000001195) ENSHCOG00000001186 stk11 (ENSHCOG00000001184) ENSHCOG00000001177 ENSHCOG00000001174 cirbpa (ENSHCOG00000001170) NDUFA13 (ENSHCOG00000001161) ENSHCOG00000001156 ARMC6 (ENSHCOG00000001149) SLC25A42 (ENSHCOG00000001141) ENSHCOG00000001136 tm6sf2a (ENSHCOG00000001130) ENSHCOG00000001125 ENSHCOG00000001122 ##22 ENSHCOG00000001107 ##22 PRKAB2 (ENSHCOG00000001092) ENSHCOG00000001081 eeig2a (ENSHCOG00000001076) ENSHCOG00000001071 ENSHCOG00000001068 ENSHCOG00000001060 ENSHCOG00000001039 ENSHCOG00000001026 ENSHCOG00000001022 ENSHCOG00000001015 WDR47 (ENSHCOG00000001011) CAMSAP2 (ENSHCOG00000001003) ENSHCOG00000000991 ENSHCOG00000000987 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.B ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.B ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 Oryzias ANCESTRAL SPECIES 12 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.B ENSGT00940000169454 ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Oryzias_b ANCESTRAL SPECIES 102 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g.u ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A Indian medaka DUPLICATION Indian medaka MODERN SPECIES 10 ENSOMEG00000021065 ENSOMEG00000021114 rnf126 (ENSOMEG00000021160) SUGP1 (ENSOMEG00000021298) stk11 (ENSOMEG00000021335) ENSOMEG00000021392 ENSOMEG00000021422 cirbpa (ENSOMEG00000021469) NDUFA13 (ENSOMEG00000021487) ENSOMEG00000021514 ARMC6 (ENSOMEG00000021531) SLC25A42 (ENSOMEG00000021554) ENSOMEG00000021633 tm6sf2a (ENSOMEG00000021701) ENSOMEG00000021725 ##22 ENSOMEG00000021771 ##22 ENSOMEG00000021795 ##22 PRKAB2 (ENSOMEG00000021827) ENSOMEG00000021913 EEIG2 (ENSOMEG00000021980) ENSOMEG00000022050 ENSOMEG00000022118 ENSOMEG00000022197 FNDC7 (ENSOMEG00000022247) ENSOMEG00000022266 ENSOMEG00000022313 WDR47 (ENSOMEG00000022386) CAMSAP2 (ENSOMEG00000022446) ticam1 (ENSOMEG00000022468) ENSOMEG00000022475 ENSOMEG00000000589 Indian medaka MODERN SPECIES 10 ENSOMEG00000021114 rnf126 (ENSOMEG00000021160) SUGP1 (ENSOMEG00000021298) stk11 (ENSOMEG00000021335) ENSOMEG00000021392 ENSOMEG00000021422 cirbpa (ENSOMEG00000021469) NDUFA13 (ENSOMEG00000021487) ENSOMEG00000021514 ARMC6 (ENSOMEG00000021531) SLC25A42 (ENSOMEG00000021554) ENSOMEG00000021633 tm6sf2a (ENSOMEG00000021701) ENSOMEG00000021725 ##22 ENSOMEG00000021771 ##22 ENSOMEG00000021795 ##22 PRKAB2 (ENSOMEG00000021827) ENSOMEG00000021913 EEIG2 (ENSOMEG00000021980) ENSOMEG00000022050 ENSOMEG00000022118 ENSOMEG00000022197 FNDC7 (ENSOMEG00000022247) ENSOMEG00000022266 ENSOMEG00000022313 WDR47 (ENSOMEG00000022386) CAMSAP2 (ENSOMEG00000022446) ticam1 (ENSOMEG00000022468) ENSOMEG00000022475 ENSOMEG00000000589 ENSOMEG00000000781 Oryzias_a ANCESTRAL SPECIES 7 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 Chinese medaka MODERN SPECIES 1097 fzr1a (ENSOSIG00000022089) ENSOSIG00000022142 ENSOSIG00000022148 rnf126 (ENSOSIG00000022173) ENSOSIG00000022177 stk11 (ENSOSIG00000022185) ENSOSIG00000022190 cirbpa (ENSOSIG00000022200) NDUFA13 (ENSOSIG00000022202) ENSOSIG00000022205 ARMC6 (ENSOSIG00000022208) SLC25A42 (ENSOSIG00000022218) ENSOSIG00000022249 tm6sf2a (ENSOSIG00000022260) ENSOSIG00000022263 ##22 ENSOSIG00000022268 ##22 PRKAB2 (ENSOSIG00000022272) ENSOSIG00000022293 eeig2a (ENSOSIG00000022325) ENSOSIG00000000804 ENSOSIG00000000828 ENSOSIG00000000836 FNDC7 (ENSOSIG00000000866) WDR47 (ENSOSIG00000000934) CAMSAP2 (ENSOSIG00000000951) ticam1 (ENSOSIG00000000956) ENSOSIG00000000958 ENSOSIG00000000964 CAPN10 (ENSOSIG00000001009) eif4e2 (ENSOSIG00000001014) ENSOSIG00000001021 Japanese Medaka HdrR MODERN SPECIES 8 ENSORLG00000015383 rnf126 (ENSORLG00000015395) SUGP1 (ENSORLG00000015411) stk11 (ENSORLG00000015419) ENSORLG00000022795 ENSORLG00000021934 cirbpa (ENSORLG00000015433) NDUFA13 (ENSORLG00000015440) ENSORLG00000015450 ARMC6 (ENSORLG00000015463) SLC25A42 (ENSORLG00000015475) ENSORLG00000023585 ENSORLG00000015492 tm6sf2a (ENSORLG00000015505) ENSORLG00000029991 ##22 ENSORLG00000015537 ##22 PRKAB2 (ENSORLG00000015550) ENSORLG00000015576 eeig2a (ENSORLG00000015603) ENSORLG00000015621 ENSORLG00000022270 FNDC7 (ENSORLG00000015635) ENSORLG00000025708 ENSORLG00000015659 WDR47 (ENSORLG00000015669) ENSORLG00000015700 ticam1 (ENSORLG00000021837) ENSORLG00000030465 ENSORLG00000028321 CAPN10 (ENSORLG00000015715) eif4e2 (ENSORLG00000015731) Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.j ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Aplocheiloidei ANCESTRAL SPECIES 19 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 Turquoise killifish MODERN SPECIES 1618 Nfu_g_1_020323 (ENSNFUG00015023068) HCN2 (ENSNFUG00015023047) rnf126 (ENSNFUG00015023032) SUGP1 (ENSNFUG00015023006) stk11 (ENSNFUG00015022996) C22H19ORF26 (ENSNFUG00015022993) ENSNFUG00015022988 CIRBP (ENSNFUG00015022982) NDUFA13 (ENSNFUG00015022975) GATAD2A (ENSNFUG00015022969) ARMC6 (ENSNFUG00015022963) SLC25A42 (ENSNFUG00015022950) ENSNFUG00015022933 tm6sf2a (ENSNFUG00015022911) ENSNFUG00015022904 ##22 ENSNFUG00015022854 ##22 PRKAB2 (ENSNFUG00015022831) ENSNFUG00015022773 eeig2a (ENSNFUG00015022753) PRPF38B (ENSNFUG00015022748) ENSNFUG00015022743 ENSNFUG00015022740 ENSNFUG00015022732 ENSNFUG00015022723 ENSNFUG00015022712 WDR47 (ENSNFUG00015022696) CAMSAP2 (ENSNFUG00015022638) TICAM1 (ENSNFUG00015022631) ENSNFUG00015022614 ENSNFUG00015022611 CAPN10 (ENSNFUG00015022595) Mangrove rivulus MODERN SPECIES 64 ENSKMAG00000006176 ENSKMAG00000006148 rnf126 (ENSKMAG00000006112) SUGP1 (ENSKMAG00000006042) stk11 (ENSKMAG00000005988) ENSKMAG00000005955 ENSKMAG00000005936 cirbpa (ENSKMAG00000005905) NDUFA13 (ENSKMAG00000005877) ENSKMAG00000005852 ARMC6 (ENSKMAG00000005828) SLC25A42 (ENSKMAG00000005803) ENSKMAG00000005755 tm6sf2a (ENSKMAG00000005730) ENSKMAG00000005722 ENSKMAG00000005672 ##22 PRKAB2 (ENSKMAG00000005628) ENSKMAG00000005592 eeig2a (ENSKMAG00000005565) ENSKMAG00000005540 ENSKMAG00000005509 FNDC7 (ENSKMAG00000005479) ENSKMAG00000005466 ENSKMAG00000005414 WDR47 (ENSKMAG00000005351) ENSKMAG00000005325 ENSKMAG00000005316 ENSKMAG00000005271 ENSKMAG00000005256 CAPN10 (ENSKMAG00000005234) eif4e2 (ENSKMAG00000005213) Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000177308 Poeciliinae ANCESTRAL SPECIES 6 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000177308.b ENSGT01050000245892 Platyfish MODERN SPECIES 20 ENSXMAG00000027603 ENSXMAG00000019326 rnf126 (ENSXMAG00000019329) SUGP1 (ENSXMAG00000019331) stk11 (ENSXMAG00000019332) ENSXMAG00000023845 ENSXMAG00000019334 cirbpa (ENSXMAG00000019336) NDUFA13 (ENSXMAG00000019337) ENSXMAG00000019339 ARMC6 (ENSXMAG00000019340) SLC25A42 (ENSXMAG00000019341) ENSXMAG00000022489 tm6sf2a (ENSXMAG00000012807) ENSXMAG00000025599 ENSXMAG00000025627 ##22 ENSXMAG00000025099 ENSXMAG00000029954 ##22 lyrm5a (ENSXMAG00000025461) dnai7 (ENSXMAG00000008690) PRKAB2 (ENSXMAG00000029888) ENSXMAG00000008670 eeig2a (ENSXMAG00000008664) ENSXMAG00000023831 FNDC7 (ENSXMAG00000008647) ENSXMAG00000023688 ENSXMAG00000008634 WDR47 (ENSXMAG00000008623) CAMSAP2 (ENSXMAG00000008609) ENSXMAG00000022282 ENSXMAG00000029151 Poecilia ANCESTRAL SPECIES 16 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000177308.b ENSGT01050000245892 ENSGT00940000159706 Guppy MODERN SPECIES 447 ENSPREG00000015024 trnau1apb (ENSPREG00000015035) fitm1l (ENSPREG00000015046) myh7l (ENSPREG00000015068) ENSPREG00000015128 ENSPREG00000015139 ENSPREG00000015162 ENSPREG00000015191 ENSPREG00000015212 lhx8a (ENSPREG00000015235) klhl20 (ENSPREG00000015265) brinp2 (ENSPREG00000015303) ENSPREG00000015333 tm6sf2a (ENSPREG00000015416) ENSPREG00000015434 ENSPREG00000015462 ##22 dnai7 (ENSPREG00000015512) lyrm5a (ENSPREG00000015524) PRKAB2 (ENSPREG00000015532) ENSPREG00000015554 eeig2a (ENSPREG00000015585) ENSPREG00000015599 ENSPREG00000015635 ENSPREG00000015669 FNDC7 (ENSPREG00000015691) ENSPREG00000015727 ENSPREG00000015791 WDR47 (ENSPREG00000015872) CAMSAP2 (ENSPREG00000015956) ENSPREG00000016009 ENSPREG00000016013 NAME_6 ANCESTRAL SPECIES 122 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00390000001810.b ENSGT00390000004708 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000177308.b ENSGT01050000245892 ENSGT00940000159706 Sailfin molly MODERN SPECIES 2161 ENSPLAG00000000318 ENSPLAG00000013440 ##22 lyrm5a (ENSPLAG00000013313) dnai7 (ENSPLAG00000013305) PRKAB2 (ENSPLAG00000013268) ENSPLAG00000013240 eeig2a (ENSPLAG00000013206) NAME_4 ANCESTRAL SPECIES 9 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.b.a.b ##22 ENSGT00390000001810.b ENSGT00390000004708 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000177308.d Mummichog MODERN SPECIES 2335 ENSFHEG00000002533 rnf126 (ENSFHEG00000002544) SUGP1 (ENSFHEG00000002556) stk11 (ENSFHEG00000002568) ENSFHEG00000002569 ENSFHEG00000002573 cirbpa (ENSFHEG00000002580) NDUFA13 (ENSFHEG00000002587) GATAD2A (ENSFHEG00000002594) ARMC6 (ENSFHEG00000002612) SLC25A42 (ENSFHEG00000002629) ENSFHEG00000002640 ENSFHEG00000002659 tm6sf2a (ENSFHEG00000002667) ENSFHEG00000002675 ENSFHEG00000002740 ##22 ENSFHEG00000002757 ##22 lyrm5a (ENSFHEG00000002767) dnai7 (ENSFHEG00000002790) PRKAB2 (ENSFHEG00000002805) ENSFHEG00000002845 eeig2a (ENSFHEG00000002856) prpf38b (ENSFHEG00000002861) ENSFHEG00000002875 ENSFHEG00000002879 ENSFHEG00000000082 ENSFHEG00000002889 ENSFHEG00000002898 WDR47 (ENSFHEG00000002929) ENSFHEG00000002941 ENSFHEG00000002948 Sheepshead minnow MODERN SPECIES 486 ENSCVAG00000004688 rnf126 (ENSCVAG00000004709) SUGP1 (ENSCVAG00000004765) stk11 (ENSCVAG00000004816) ENSCVAG00000004827 ENSCVAG00000004841 cirbpa (ENSCVAG00000004853) NDUFA13 (ENSCVAG00000004870) ENSCVAG00000004965 ARMC6 (ENSCVAG00000004995) SLC25A42 (ENSCVAG00000005020) ENSCVAG00000000943 tm6sf2a (ENSCVAG00000005061) ENSCVAG00000005071 ENSCVAG00000005162 ##22 ENSCVAG00000005174 lyrm5a (ENSCVAG00000005184) dnai7 (ENSCVAG00000005382) PRKAB2 (ENSCVAG00000005412) ENSCVAG00000005462 eeig2a (ENSCVAG00000005517) ENSCVAG00000005543 prpf38b (ENSCVAG00000005557) FNDC7 (ENSCVAG00000005565) ENSCVAG00000005614 WDR47 (ENSCVAG00000005653) CAMSAP2 (ENSCVAG00000005668) ENSCVAG00000000166 ENSCVAG00000005677 ENSCVAG00000005683 Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00940000169454 ENSGT00390000004674.j ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000177587 ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00980000198947 ENSGT00940000163706 ENSGT00940000177035.B ENSGT00940000177035.C Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 218 ENSACIG00000016094 cirbpa (ENSACIG00000016116) NDUFA13 (ENSACIG00000016189) GATAD2A (ENSACIG00000016205) MAU2 (ENSACIG00000016238) ARMC6 (ENSACIG00000016270) SLC25A42 (ENSACIG00000016286) ENSACIG00000016310 tm6sf2a (ENSACIG00000016336) ENSACIG00000016359 ENSACIG00000016364 ##22 ENSACIG00000016395 ##22 PRKAB2 (ENSACIG00000016406) ENSACIG00000016423 eeig2a (ENSACIG00000016446) ENSACIG00000016459 prpf38b (ENSACIG00000016479) FNDC7 (ENSACIG00000016485) Midas cichlid MODERN SPECIES 218 ENSACIG00000016094 cirbpa (ENSACIG00000016116) NDUFA13 (ENSACIG00000016189) GATAD2A (ENSACIG00000016205) MAU2 (ENSACIG00000016238) ARMC6 (ENSACIG00000016270) SLC25A42 (ENSACIG00000016286) ENSACIG00000016310 tm6sf2a (ENSACIG00000016336) ENSACIG00000016359 ENSACIG00000016364 ##22 ENSACIG00000016395 ##22 PRKAB2 (ENSACIG00000016406) ENSACIG00000016423 eeig2a (ENSACIG00000016446) ENSACIG00000016459 prpf38b (ENSACIG00000016479) FNDC7 (ENSACIG00000016485) Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000157113.d.e ENSGT00940000157113.d.f ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00940000169454 ENSGT00390000004674.j ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000162108.z.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00980000198947 Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000157113.d.e ENSGT00940000157113.d.f ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00390000004674.j ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000162108.z.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00980000198947 ENSGT00940000163706 Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000157113.d.e ENSGT00940000157113.d.f ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00940000169454 ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000162108.z.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00980000198947 ENSGT00940000163706 ENSGT00940000177035.B.b.b ENSGT00940000177035.B.b.a.a Burton s mouthbrooder DUPLICATION Burton s mouthbrooder MODERN SPECIES 306 rnf126 (ENSHBUG00000021965) SUGP1 (ENSHBUG00000022000) stk11 (ENSHBUG00000022038) ENSHBUG00000022044 ENSHBUG00000022050 cirbpa (ENSHBUG00000022060) NDUFA13 (ENSHBUG00000022075) GATAD2A (ENSHBUG00000022153) MAU2 (ENSHBUG00000001179) ARMC6 (ENSHBUG00000022237) SLC25A42 (ENSHBUG00000022280) ENSHBUG00000022299 tm6sf2a (ENSHBUG00000022363) ENSHBUG00000022373 ENSHBUG00000022408 ##22 ENSHBUG00000022430 ##22 PRKAB2 (ENSHBUG00000022443) ENSHBUG00000000689 eeig2a (ENSHBUG00000022488) prpf38b (ENSHBUG00000022496) ENSHBUG00000022551 FNDC7 (ENSHBUG00000022563) ENSHBUG00000022656 ENSHBUG00000022672 ENSHBUG00000022748 WDR47 (ENSHBUG00000022815) CAMSAP2 (ENSHBUG00000022846) ENSHBUG00000022857 ENSHBUG00000022868 ENSHBUG00000022903 ENSHBUG00000022940 Burton s mouthbrooder MODERN SPECIES 306 ENSHBUG00000021923 rnf126 (ENSHBUG00000021965) SUGP1 (ENSHBUG00000022000) stk11 (ENSHBUG00000022038) ENSHBUG00000022044 ENSHBUG00000022050 cirbpa (ENSHBUG00000022060) NDUFA13 (ENSHBUG00000022075) GATAD2A (ENSHBUG00000022153) MAU2 (ENSHBUG00000001179) ARMC6 (ENSHBUG00000022237) SLC25A42 (ENSHBUG00000022280) ENSHBUG00000022299 tm6sf2a (ENSHBUG00000022363) ENSHBUG00000022373 ENSHBUG00000022408 ##22 ENSHBUG00000022430 ##22 PRKAB2 (ENSHBUG00000022443) ENSHBUG00000000689 eeig2a (ENSHBUG00000022488) prpf38b (ENSHBUG00000022496) ENSHBUG00000022551 FNDC7 (ENSHBUG00000022563) ENSHBUG00000022656 ENSHBUG00000022672 ENSHBUG00000022748 WDR47 (ENSHBUG00000022815) CAMSAP2 (ENSHBUG00000022846) ENSHBUG00000022857 ENSHBUG00000022868 ENSHBUG00000022903 Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000157113.d.e ENSGT00940000157113.d.f ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00940000169454 ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000164656.b.b.a.a.a.a.a.b.a ENSGT00940000162108.z.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00980000198947 ENSGT00940000163706 ENSGT00940000177035.B.b.b Haplochromini_B ANCESTRAL SPECIES 12 ENSGT00940000156523.b.d ENSGT00940000157113.d.e ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00940000169454 ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000164656.b.b.a.a.a.a.a.b.a.a ENSGT00940000162108.z.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000177035.B.b.b ENSGT00940000177035.A.a Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1100 ENSMZEG00005025597 rnf126 (ENSMZEG00005025594) SUGP1 (ENSMZEG00005025588) stk11 (ENSMZEG00005025586) ENSMZEG00005025583 ENSMZEG00005025580 ENSMZEG00005025577 NDUFA13 (ENSMZEG00005025576) ENSMZEG00005025575 MAU2 (ENSMZEG00005025570) ARMC6 (ENSMZEG00005025567) SLC25A42 (ENSMZEG00005025562) ENSMZEG00005025554 tm6sf2a (ENSMZEG00005025551) ENSMZEG00005025549 ENSMZEG00005025548 ##22 ENSMZEG00005025546 ##22 PRKAB2 (ENSMZEG00005025544) ENSMZEG00005025543 eeig2a (ENSMZEG00005025539) prpf38b (ENSMZEG00005025536) ENSMZEG00005025534 ENSMZEG00005025533 ENSMZEG00005025531 ENSMZEG00005025529 ENSMZEG00005025527 EPHB1 (ENSMZEG00005025526) gpc1b (ENSMZEG00005025525) ENSMZEG00005025524 NYAP2 (ENSMZEG00005025523) COL4A4 (ENSMZEG00005025522) Zebra mbuna MODERN SPECIES 1100 rnf126 (ENSMZEG00005025594) SUGP1 (ENSMZEG00005025588) stk11 (ENSMZEG00005025586) ENSMZEG00005025583 ENSMZEG00005025580 ENSMZEG00005025577 NDUFA13 (ENSMZEG00005025576) ENSMZEG00005025575 MAU2 (ENSMZEG00005025570) ARMC6 (ENSMZEG00005025567) SLC25A42 (ENSMZEG00005025562) ENSMZEG00005025554 tm6sf2a (ENSMZEG00005025551) ENSMZEG00005025549 ENSMZEG00005025548 ##22 ENSMZEG00005025546 ##22 PRKAB2 (ENSMZEG00005025544) ENSMZEG00005025543 eeig2a (ENSMZEG00005025539) prpf38b (ENSMZEG00005025536) ENSMZEG00005025534 ENSMZEG00005025533 ENSMZEG00005025531 ENSMZEG00005025529 ENSMZEG00005025527 EPHB1 (ENSMZEG00005025526) gpc1b (ENSMZEG00005025525) ENSMZEG00005025524 NYAP2 (ENSMZEG00005025523) COL4A4 (ENSMZEG00005025522) ENSMZEG00005025521 Eastern happy DUPLICATION Eastern happy DUPLICATION Eastern happy MODERN SPECIES 9 ENSACLG00000002245 rnf126 (ENSACLG00000002225) SUGP1 (ENSACLG00000002221) stk11 (ENSACLG00000002194) ENSACLG00000002139 ENSACLG00000002119 ENSACLG00000002094 NDUFA13 (ENSACLG00000002082) ENSACLG00000002069 MAU2 (ENSACLG00000002022) ARMC6 (ENSACLG00000001997) SLC25A42 (ENSACLG00000001966) ENSACLG00000001902 tm6sf2a (ENSACLG00000001874) ENSACLG00000001860 ##22 ENSACLG00000001845 ##22 ENSACLG00000001825 ##22 ENSACLG00000001819 PRKAB2 (ENSACLG00000001789) ENSACLG00000001741 eeig2a (ENSACLG00000001733) prpf38b (ENSACLG00000001712) ENSACLG00000001620 ENSACLG00000001614 ENSACLG00000001582 ENSACLG00000001558 ENSACLG00000001481 ENSACLG00000001471 ENSACLG00000001369 WDR47 (ENSACLG00000001300) CAMSAP2 (ENSACLG00000001238) Eastern happy MODERN SPECIES 9 rnf126 (ENSACLG00000002225) SUGP1 (ENSACLG00000002221) stk11 (ENSACLG00000002194) ENSACLG00000002139 ENSACLG00000002119 ENSACLG00000002094 NDUFA13 (ENSACLG00000002082) ENSACLG00000002069 MAU2 (ENSACLG00000002022) ARMC6 (ENSACLG00000001997) SLC25A42 (ENSACLG00000001966) ENSACLG00000001902 tm6sf2a (ENSACLG00000001874) ENSACLG00000001860 ##22 ENSACLG00000001845 ##22 ENSACLG00000001825 ##22 ENSACLG00000001819 PRKAB2 (ENSACLG00000001789) ENSACLG00000001741 eeig2a (ENSACLG00000001733) prpf38b (ENSACLG00000001712) ENSACLG00000001620 ENSACLG00000001614 ENSACLG00000001582 ENSACLG00000001558 ENSACLG00000001481 ENSACLG00000001471 ENSACLG00000001369 WDR47 (ENSACLG00000001300) CAMSAP2 (ENSACLG00000001238) ENSACLG00000001230 Eastern happy MODERN SPECIES 9 ENSACLG00000002268 ENSACLG00000002245 rnf126 (ENSACLG00000002225) SUGP1 (ENSACLG00000002221) stk11 (ENSACLG00000002194) ENSACLG00000002139 ENSACLG00000002119 ENSACLG00000002094 NDUFA13 (ENSACLG00000002082) ENSACLG00000002069 MAU2 (ENSACLG00000002022) ARMC6 (ENSACLG00000001997) SLC25A42 (ENSACLG00000001966) ENSACLG00000001902 tm6sf2a (ENSACLG00000001874) ENSACLG00000001860 ##22 ENSACLG00000001845 ##22 ENSACLG00000001825 ##22 ENSACLG00000001819 PRKAB2 (ENSACLG00000001789) ENSACLG00000001741 eeig2a (ENSACLG00000001733) prpf38b (ENSACLG00000001712) ENSACLG00000001620 ENSACLG00000001614 ENSACLG00000001582 ENSACLG00000001558 ENSACLG00000001481 ENSACLG00000001471 ENSACLG00000001369 WDR47 (ENSACLG00000001300) Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 300 ENSNBRG00000019774 ENSNBRG00000019759 stk11 (ENSNBRG00000019738) ENSNBRG00000019709 ENSNBRG00000019693 cirbpa (ENSNBRG00000019658) NDUFA13 (ENSNBRG00000019643) GATAD2A (ENSNBRG00000019611) MAU2 (ENSNBRG00000019564) ARMC6 (ENSNBRG00000019517) SLC25A42 (ENSNBRG00000019458) ENSNBRG00000019423 ENSNBRG00000019397 tm6sf2a (ENSNBRG00000019383) ENSNBRG00000019372 ENSNBRG00000019352 ##22 ENSNBRG00000019338 ##22 PRKAB2 (ENSNBRG00000019297) ENSNBRG00000019259 eeig2a (ENSNBRG00000019233) ENSNBRG00000019221 prpf38b (ENSNBRG00000019212) ENSNBRG00000019185 FNDC7 (ENSNBRG00000019144) ENSNBRG00000019124 ENSNBRG00000019083 ENSNBRG00000019072 ENSNBRG00000019030 WDR47 (ENSNBRG00000018899) ENSNBRG00000018795 ENSNBRG00000018787 Lyretail cichlid MODERN SPECIES 300 ENSNBRG00000019759 stk11 (ENSNBRG00000019738) ENSNBRG00000019709 ENSNBRG00000019693 cirbpa (ENSNBRG00000019658) NDUFA13 (ENSNBRG00000019643) GATAD2A (ENSNBRG00000019611) MAU2 (ENSNBRG00000019564) ARMC6 (ENSNBRG00000019517) SLC25A42 (ENSNBRG00000019458) ENSNBRG00000019423 ENSNBRG00000019397 tm6sf2a (ENSNBRG00000019383) ENSNBRG00000019372 ENSNBRG00000019352 ##22 ENSNBRG00000019338 ##22 PRKAB2 (ENSNBRG00000019297) ENSNBRG00000019259 eeig2a (ENSNBRG00000019233) ENSNBRG00000019221 prpf38b (ENSNBRG00000019212) ENSNBRG00000019185 FNDC7 (ENSNBRG00000019144) ENSNBRG00000019124 ENSNBRG00000019083 ENSNBRG00000019072 ENSNBRG00000019030 WDR47 (ENSNBRG00000018899) ENSNBRG00000018795 ENSNBRG00000018787 ENSNBRG00000018724 Pomacentridae ANCESTRAL SPECIES 6 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00940000169454 ENSGT00390000004674.j ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000178918 ENSGT00940000177587 ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Pomacentridae_A ANCESTRAL SPECIES 18 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00940000180150 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 Amphiprion ANCESTRAL SPECIES 48 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00940000180150 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00940000169454 ENSGT00390000004674.j ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000178918 ENSGT00940000177587 ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Orange clownfish MODERN SPECIES 1 ENSAPEG00000012186 rnf126 (ENSAPEG00000012142) SUGP1 (ENSAPEG00000012114) stk11 (ENSAPEG00000012073) ENSAPEG00000012060 ENSAPEG00000012024 cirbpa (ENSAPEG00000011989) NDUFA13 (ENSAPEG00000011952) ENSAPEG00000011933 MAU2 (ENSAPEG00000011872) ARMC6 (ENSAPEG00000011837) SLC25A42 (ENSAPEG00000011803) ENSAPEG00000011552 tm6sf2a (ENSAPEG00000011334) ENSAPEG00000011305 ENSAPEG00000011200 ##22 ENSAPEG00000011186 PRKAB2 (ENSAPEG00000011137) ENSAPEG00000011073 eeig2a (ENSAPEG00000011008) prpf38b (ENSAPEG00000010974) ENSAPEG00000010959 ENSAPEG00000010923 FNDC7 (ENSAPEG00000010841) ENSAPEG00000010824 ENSAPEG00000010798 ENSAPEG00000010709 WDR47 (ENSAPEG00000010629) CAMSAP2 (ENSAPEG00000010609) ENSAPEG00000010604 ENSAPEG00000010587 Clown anemonefish MODERN SPECIES 763 tm6sf2a (ENSAOCG00000013225) ENSAOCG00000013117 ENSAOCG00000000824 ENSAOCG00000013067 ##22 ENSAOCG00000012840 ##22 ENSAOCG00000012811 PRKAB2 (ENSAOCG00000002014) ENSAOCG00000012764 eeig2a (ENSAOCG00000012718) prpf38b (ENSAOCG00000012675) ENSAOCG00000012660 FNDC7 (ENSAOCG00000002076) ENSAOCG00000012591 ENSAOCG00000012566 WDR47 (ENSAOCG00000012475) CAMSAP2 (ENSAOCG00000012397) ENSAOCG00000012316 ENSAOCG00000012285 ENSAOCG00000012268 Spiny chromis MODERN SPECIES 298 rnf126 (ENSAPOG00000004118) SUGP1 (ENSAPOG00000004189) stk11 (ENSAPOG00000004402) ENSAPOG00000004420 ENSAPOG00000004429 cirbpa (ENSAPOG00000004458) NDUFA13 (ENSAPOG00000004491) GATAD2A (ENSAPOG00000004524) MAU2 (ENSAPOG00000004632) ARMC6 (ENSAPOG00000004711) SLC25A42 (ENSAPOG00000004755) ENSAPOG00000004816 tm6sf2a (ENSAPOG00000004835) ENSAPOG00000004854 ENSAPOG00000004871 ENSAPOG00000005032 ##22 ENSAPOG00000005080 ENSAPOG00000005111 ##22 PRKAB2 (ENSAPOG00000005152) ENSAPOG00000001042 EEIG2 (ENSAPOG00000005269) prpf38b (ENSAPOG00000005297) Bicolor damselfish MODERN SPECIES 500 SUGP1 (ENSSPAG00000023010) stk11 (ENSSPAG00000023023) CBARP (ENSSPAG00000023030) ENSSPAG00000023035 cirbpa (ENSSPAG00000023037) NDUFA13 (ENSSPAG00000023039) GATAD2A (ENSSPAG00000023043) ENSSPAG00000023048 MAU2 (ENSSPAG00000023055) ARMC6 (ENSSPAG00000023069) SLC25A42 (ENSSPAG00000023080) ENSSPAG00000023091 ENSSPAG00000023096 tm6sf2a (ENSSPAG00000023103) ENSSPAG00000023108 ENSSPAG00000023117 ##22 ENSSPAG00000023139 ##22 PRKAB2 (ENSSPAG00000023145) ENSSPAG00000023152 eeig2a (ENSSPAG00000023156) prpf38b (ENSSPAG00000023160) ENSSPAG00000023170 FNDC7 (ENSSPAG00000023175) ENSSPAG00000023178 ENSSPAG00000023182 ENSSPAG00000023187 WDR47 (ENSSPAG00000023199) CAMSAP2 (ENSSPAG00000023212) ENSSPAG00000023223 ENSSPAG00000023234 ENSSPAG00000023239 Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Carangaria ANCESTRAL SPECIES 5 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 Carangaria_A ANCESTRAL SPECIES 2 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Seriola ANCESTRAL SPECIES ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Greater amberjack MODERN SPECIES 83 ENSSDUG00000015921 rnf126 (ENSSDUG00000015961) SUGP1 (ENSSDUG00000016002) stk11 (ENSSDUG00000016044) ENSSDUG00000016066 ENSSDUG00000016081 cirbpa (ENSSDUG00000016099) NDUFA13 (ENSSDUG00000016119) ENSSDUG00000016139 MAU2 (ENSSDUG00000016192) ARMC6 (ENSSDUG00000016271) SLC25A42 (ENSSDUG00000016297) ENSSDUG00000016331 tm6sf2a (ENSSDUG00000016368) ENSSDUG00000016383 ENSSDUG00000016399 ##22 ENSSDUG00000016490 PRKAB2 (ENSSDUG00000016500) ENSSDUG00000016514 eeig2a (ENSSDUG00000016534) ENSSDUG00000016574 prpf38b (ENSSDUG00000016590) ENSSDUG00000016601 FNDC7 (ENSSDUG00000016648) ENSSDUG00000016710 ENSSDUG00000016774 WDR47 (ENSSDUG00000016816) CAMSAP2 (ENSSDUG00000016904) ticam1 (ENSSDUG00000016955) ENSSDUG00000016970 ENSSDUG00000016993 Pleuronectoidei ANCESTRAL SPECIES 148 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 Tongue sole MODERN SPECIES 12 mbnl1 (ENSCSEG00000015783) ENSCSEG00000015746 ENSCSEG00000015718 ENSCSEG00000015701 mterf4 (ENSCSEG00000015693) ENSCSEG00000015685 klhl24a (ENSCSEG00000015671) ENSCSEG00000015638 MAP6D1 (ENSCSEG00000015627) ENSCSEG00000015622 camk2n1a (ENSCSEG00000015619) mul1a (ENSCSEG00000015611) alg3 (ENSCSEG00000015600) ENSCSEG00000015576 ENSCSEG00000015573 ENSCSEG00000015108 ##22 ENSCSEG00000015096 ENSCSEG00000015091 ##22 PRKAB2 (ENSCSEG00000015082) ENSCSEG00000015069 eeig2a (ENSCSEG00000015040) ENSCSEG00000015030 ENSCSEG00000015022 ENSCSEG00000015018 ENSCSEG00000014993 ENSCSEG00000014966 WDR47 (ENSCSEG00000014922) CAMSAP2 (ENSCSEG00000014885) ticam1 (ENSCSEG00000014878) ENSCSEG00000014844 ENSCSEG00000014826 Eupercaria ANCESTRAL SPECIES 22 ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b Tetraodontidae ANCESTRAL SPECIES 13 ENSGT00950000182925.C.a.a ENSGT00940000156523.b.d ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT01070000253760.b.a.a.a.b.d.a.b.b ENSGT00940000172979 Fugu MODERN SPECIES 14 ENSTRUG00000025344 ENSTRUG00000009472 rnf126 (ENSTRUG00000009560) SUGP1 (ENSTRUG00000009724) stk11 (ENSTRUG00000009891) ENSTRUG00000010019 ENSTRUG00000010069 cirbp (ENSTRUG00000010187) NDUFA13 (ENSTRUG00000031395) ENSTRUG00000010208 ARMC6 (ENSTRUG00000010295) SLC25A42 (ENSTRUG00000010352) ENSTRUG00000010430 tm6sf2a (ENSTRUG00000010612) ENSTRUG00000023574 ##22 ENSTRUG00000029868 ##22 ENSTRUG00000010846 ##22 PRKAB2 (ENSTRUG00000023478) ENSTRUG00000011259 eeig2a (ENSTRUG00000011642) ENSTRUG00000011765 ENSTRUG00000033150 ENSTRUG00000032528 FNDC7 (ENSTRUG00000014913) ENSTRUG00000031126 ENSTRUG00000014852 WDR47 (ENSTRUG00000014812) CAMSAP2 (ENSTRUG00000014682) ticam (ENSTRUG00000014679) ENSTRUG00000033431 ENSTRUG00000000561 Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000157113.d ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622.f ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 Ballan wrasse MODERN SPECIES 63 ENSLBEG00000000459 rnf126 (ENSLBEG00000000394) SUGP1 (ENSLBEG00000000335) stk11 (ENSLBEG00000000328) ENSLBEG00000000323 ENSLBEG00000000316 cirbpa (ENSLBEG00000000292) NDUFA13 (ENSLBEG00000000263) GATAD2A (ENSLBEG00000025177) ARMC6 (ENSLBEG00000025147) SLC25A42 (ENSLBEG00000025113) ENSLBEG00000025058 ENSLBEG00000025028 tm6sf2a (ENSLBEG00000024990) ENSLBEG00000024955 ENSLBEG00000024763 ##22 PRKAB2 (ENSLBEG00000024664) ENSLBEG00000024625 eeig2a (ENSLBEG00000024567) prpf38b (ENSLBEG00000024500) ENSLBEG00000024463 ENSLBEG00000024436 FNDC7 (ENSLBEG00000024371) ENSLBEG00000024332 ENSLBEG00000024300 WDR47 (ENSLBEG00000024263) CAMSAP2 (ENSLBEG00000024082) ENSLBEG00000023970 CAPN10 (ENSLBEG00000023913) eif4e2 (ENSLBEG00000023869) ENSLBEG00000023843 Clupeocephala ANCESTRAL SPECIES 227 ENSGT01020000231030 ENSGT00940000166019 ENSGT00940000166054 ENSGT00940000160168.b.a ENSGT00940000164633 ENSGT00940000161063 ENSGT00530000063751.a.b ENSGT00730000111014.o.a ENSGT00390000012568 ENSGT00940000154499 ENSGT00940000154149.b.a.g.a ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00390000005318.a.a.b ENSGT00940000156470.v.a ENSGT00390000006876 ENSGT00940000164927.a ENSGT00940000156132.h ENSGT00390000004798 ENSGT00390000004674.i.b ENSGT00940000157607 ENSGT00940000154667.b.a Otomorpha ANCESTRAL SPECIES 203 ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b.h ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00940000156132.h ENSGT00390000004798 ENSGT00940000157064.a.b.b.a.a.q ENSGT00980000198596.B ENSGT00390000004674.i.b ENSGT00940000157607 ENSGT00940000154667.b.a Otophysi ANCESTRAL SPECIES 7 ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b.h ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.d ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00390000013141 ENSGT00940000166937 ENSGT00950000183149.C.b ENSGT00940000157136.b ENSGT00940000159860.e ENSGT01050000244824.B ENSGT00940000156618.c.a ENSGT01030000234597.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00940000156852.d ENSGT00950000182843.a.a.a.b.a.a.a.a ENSGT00390000004799 ENSGT00390000005861.a ENSGT00940000156992.e Characiphysae ANCESTRAL SPECIES 24 ENSGT00530000063690.a.a ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b ENSGT00940000165355 ENSGT00390000017860.b ENSGT00390000004612 ENSGT00940000153441.a.a ENSGT00940000157620 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.c ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00390000013141 ENSGT00940000166937 ENSGT00950000183149.C.b ENSGT00940000157136.b ENSGT00940000159860.e ENSGT01050000244824.B ENSGT00940000156618.c.a ENSGT01030000234597.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00940000156852.d ENSGT00950000182843.a.a.a.b.a.a.a.a ENSGT00390000005861.a ENSGT00940000156992.e ENSGT00390000010056.b Characiphysae_b ANCESTRAL SPECIES 23 ENSGT00530000063690.a.a ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b ENSGT00940000165355 ENSGT00390000017860.b ENSGT00390000004612 ENSGT00940000153441.a.a ENSGT00940000157620 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.c ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00390000013141 ENSGT00940000166937 ENSGT00950000183149.C.b ENSGT00940000157136.b ENSGT00940000159860.e ENSGT01050000244824.B ENSGT00940000156618.c.a ENSGT01030000234597.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00940000156852.d ENSGT00950000182843.a.a.a.b.a.a.a.a ENSGT00390000010056.b ENSGT01030000234517.H.b.k ENSGT00940000156491.a.d Characoidei ANCESTRAL SPECIES 21 ENSGT00530000063690.a.a ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b ENSGT00940000165355 ENSGT00390000017860.b ENSGT00390000004612 ENSGT00940000153441.a.a ENSGT00940000157620 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.c ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00390000013141 ENSGT00940000166937 ENSGT00950000183149.C.b ENSGT00940000157136.b ENSGT00940000159860.e ENSGT01050000244824.B ENSGT00940000156618.c.a ENSGT01030000234597.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00940000156852.d ENSGT00950000182843.a.a.a.b.a.a.a.a Mexicana tetra MODERN SPECIES 18 TNS3 (ENSAMXG00000009528) si:ch211-191a24.4 (ENSAMXG00000035418) mcm3l (ENSAMXG00000032018) mep1ba (ENSAMXG00000009554) ENSAMXG00000036278 ENSAMXG00000037574 PALLD (ENSAMXG00000009581) cbr4 (ENSAMXG00000036711) TRMT1L (ENSAMXG00000009602) niban1a (ENSAMXG00000009608) kifap3a (ENSAMXG00000009625) ntmt2 (ENSAMXG00000009655) gorab (ENSAMXG00000035192) PRRX1 (ENSAMXG00000032983) ENSAMXG00000036779 ENSAMXG00000042731 ##22 ENSAMXG00000043606 ##22 slc25a24 (ENSAMXG00000009717) elp3 (ENSAMXG00000009723) si:ch211-63o20.7 (ENSAMXG00000009746) pnocb (ENSAMXG00000042920) znf395b (ENSAMXG00000009775) paqr8 (ENSAMXG00000025525) mcm3 (ENSAMXG00000009797) il17a/f3 (ENSAMXG00000039772) stmn4 (ENSAMXG00000041709) cdc42bpb (ENSAMXG00000019172) vipas39 (ENSAMXG00000019164) ENSAMXG00000026157 runx2b (ENSAMXG00000035698) opn8a (ENSAMXG00000030048) Red-bellied piranha MODERN SPECIES 329 TRMT1L (ENSPNAG00000004389) niban1a (ENSPNAG00000005531) kifap3a (ENSPNAG00000028726) ntmt2 (ENSPNAG00000028749) gorab (ENSPNAG00000028768) PRRX1 (ENSPNAG00000028803) ENSPNAG00000028915 ##22 slc25a24 (ENSPNAG00000028987) elp3 (ENSPNAG00000029054) si:ch211-63o20.7 (ENSPNAG00000029063) pnocb (ENSPNAG00000029078) znf395b (ENSPNAG00000029097) paqr8 (ENSPNAG00000004508) mcm3 (ENSPNAG00000029681) il17a/f3 (ENSPNAG00000029698) stmn4 (ENSPNAG00000029705) emilin1a (ENSPNAG00000029714) ankef1a (ENSPNAG00000029721) snap25a (ENSPNAG00000029735) sccpdhb (ENSPNAG00000029744) cnstb (ENSPNAG00000029747) ENSPNAG00000009749 Channel catfish MODERN SPECIES 17 SLC10A4 (ENSIPUG00000009233) lrg1 (ENSIPUG00000009218) slain2 (ENSIPUG00000009191) anapc4 (ENSIPUG00000009114) PALLD (ENSIPUG00000008999) cbr4 (ENSIPUG00000008908) TRMT1L (ENSIPUG00000008873) srd5a3 (ENSIPUG00000008842) c25h12orf57 (ENSIPUG00000008823) niban1a (ENSIPUG00000008779) KIFAP3 (ENSIPUG00000008497) mettl11b (ENSIPUG00000008461) gorab (ENSIPUG00000008452) PRRX1 (ENSIPUG00000008362) ENSIPUG00000008346 ENSIPUG00000008267 ##22 slc25a24 (ENSIPUG00000008225) elp3 (ENSIPUG00000008133) PDIK1L (ENSIPUG00000008116) pnoc (ENSIPUG00000008105) znf395 (ENSIPUG00000008084) paqr8 (ENSIPUG00000008073) MCM3 (ENSIPUG00000007956) Il17f (ENSIPUG00000007931) Stmn4 (ENSIPUG00000007910) emilin1a (ENSIPUG00000007899) ankef1a (ENSIPUG00000007880) snap25 (ENSIPUG00000007864) cnstb (ENSIPUG00000007828) ENSIPUG00000007794 hnrnpu (ENSIPUG00000007749) Cyprinoidei ANCESTRAL SPECIES 8 ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b.h ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466.d ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00390000013141 ENSGT00940000166937 ENSGT00950000183149.C.b ENSGT00940000157136.b ENSGT01030000234597.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00940000156852.d ENSGT00950000182843.a.a.a.b.a.a.a.a ENSGT00940000163104 ENSGT00390000004799 ENSGT00390000005861.a ENSGT00940000157501.h ENSGT00940000159887.e ENSGT00940000180531 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 58 ENSGT00530000063751.a.a.a ENSGT00730000111014.o.b.b ENSGT01030000234567.B.a.a.b.a.a.e.b ENSGT00940000156236.a.a.f ENSGT00390000010743.a.a.b ENSGT01030000234606.b.e.b.d ENSGT00940000154654.a.b.h.c ENSGT00940000155635.u.b ENSGT00390000001254.e ENSGT00530000063646.a.c ENSGT00940000154149.b.a.g.b.a ENSGT00390000003574.a.b ENSGT00390000008371.a.e ENSGT00390000014886.i ENSGT00940000159466.d.c.a ENSGT00950000183190.a.a.b.c.b.a.a ##22 ENSGT00940000164927.a.a ENSGT00390000013141.a ENSGT00940000166937.b ENSGT00950000183149.C.b.c ENSGT00940000157136.b.b ENSGT00940000159860.e.b ENSGT01050000244824.B.db.b ENSGT00940000156618.c.a.a ENSGT01030000234597.a.b.a.b.e ENSGT01030000234633.A.a.b.a ENSGT00940000156852.d.b ENSGT00390000005861.a.a ENSGT00940000159075.B.j.b ENSGT00940000156546.`b.a.a ENSGT00390000010056.b.c Cyprininae_a ANCESTRAL SPECIES 257 ENSGT01030000234606.b.e.b.d ENSGT00940000154654.a.b.h.c ENSGT00940000154614.qe ENSGT00940000155635.u.b ENSGT00390000001254.e ENSGT00530000063646.a.c ENSGT00940000154149.b.a.g.b.a ENSGT00390000003574.a.b ENSGT00390000008371.a.e ENSGT00390000008371.a.f ENSGT00390000014886.i ENSGT00940000159466.d.c.a ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b.a.b ##22 ENSGT00950000183190.a.a.b.c.b.b ##22 ENSGT00950000183190.a.a.b.c.b.a.a ##22 ENSGT00940000164927.a.a ENSGT00390000013141.a ENSGT00940000166937.b ENSGT00950000183149.C.b.c ENSGT00940000157136.b.b ENSGT01050000244824.B.db.b ENSGT00940000156618.c.a.a ENSGT01030000234597.a.b.a.b.e ENSGT01030000234633.A.a.b.a ENSGT00940000156852.d.b ENSGT00390000005861.a.a ENSGT00940000159075.B.j.b ENSGT00940000156546.`b.a.a ENSGT00390000010056.b.c ENSGT01030000234517.H.b.k.b Common carp reference MODERN SPECIES 28 prg4b (ENSCCRG00000045562) tprb (ENSCCRG00000045588) pdcb (ENSCCRG00000073915) ptgs2b (ENSCCRG00000045662) PLA2G4A (ENSCCRG00000045689) arpc5b (ENSCCRG00000074120) HMCN1 (ENSCCRG00000021811) ivns1abpa (ENSCCRG00000028200) ENSCCRG00000028194 niban1a (ENSCCRG00000027491) kifap3a (ENSCCRG00000023708) ntmt2 (ENSCCRG00000037004) gorab (ENSCCRG00000023654) prrx1b (ENSCCRG00000071513) ENSCCRG00000069171 ##22 ENSCCRG00000070865 ##22 slc25a24 (ENSCCRG00000062518) elp3 (ENSCCRG00000007703) si:ch211-63o20.7 (ENSCCRG00000066954) znf395b (ENSCCRG00000007688) mcm3 (ENSCCRG00000020414) il17a/f3 (ENSCCRG00000078734) stmn4 (ENSCCRG00000068496) emilin1a (ENSCCRG00000056865) ankef1a (ENSCCRG00000032559) snap25a (ENSCCRG00000034090) sccpdhb (ENSCCRG00000009379) cnstb (ENSCCRG00000078235) ENSCCRG00000009391 hnrnpub (ENSCCRG00000009415) lft1 (ENSCCRG00000023109) Goldfish MODERN SPECIES 39 si:dkey-97o5.1 (ENSCARG00000069052) scyl3 (ENSCARG00000068996) prg4b (ENSCARG00000068986) pdcb (ENSCARG00000068919) ptgs2b (ENSCARG00000068825) PLA2G4A (ENSCARG00000068417) arpc5b (ENSCARG00000068377) ivns1abpa (ENSCARG00000068328) TRMT1L (ENSCARG00000068128) niban1a (ENSCARG00000068067) ENSCARG00000068062 kifap3a (ENSCARG00000067962) ntmt2 (ENSCARG00000067920) gorab (ENSCARG00000067913) prrx1b (ENSCARG00000067889) ENSCARG00000067854 ##22 slc25a24 (ENSCARG00000067716) elp3 (ENSCARG00000067485) si:ch211-63o20.7 (ENSCARG00000067453) pnocb (ENSCARG00000067449) znf395b (ENSCARG00000067406) paqr8 (ENSCARG00000067389) mcm3 (ENSCARG00000066540) il17a/f3 (ENSCARG00000066446) moxd1 (ENSCARG00000066358) ccn2a (ENSCARG00000066342) itsn2a (ENSCARG00000066063) mrpl19 (ENSCARG00000066000) pfas (ENSCARG00000065577) ENSCARG00000065543 hook1 (ENSCARG00000063593) Cyprininae ANCESTRAL SPECIES 339 ENSGT00390000014886.j ENSGT00940000159466.d.c.b ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b.a.b ##22 ENSGT00940000164927.a.b ENSGT00390000013141.b ENSGT00940000166937.a ENSGT00950000183149.C.b.d ENSGT00940000157136.b.a ENSGT00940000159860.e.a ENSGT01050000244824.B.db.a ENSGT00940000156618.c.a.b ENSGT01030000234597.a.b.a.b.f ENSGT01030000234633.A.a.b.b ENSGT00940000156852.d.a ENSGT00950000182843.a.a.a.b.a.a.a.a ENSGT00390000004799.n ENSGT00390000005861.a.b ENSGT00940000159075.B.j.a Cyprininae_a ANCESTRAL SPECIES 257 ENSGT00940000156236.a.a.f ENSGT00390000010743.a.a.b ENSGT01030000234606.b.e.b.d ENSGT00940000154654.a.b.h.c ENSGT00940000154614.qe ENSGT00940000155635.u.b ENSGT00390000001254.e ENSGT00530000063646.a.c ENSGT00940000154149.b.a.g.b.a ENSGT00390000003574.a.b ENSGT00390000008371.a.e ENSGT00390000008371.a.f ENSGT00390000014886.i ENSGT00940000159466.d.c.a ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b.a.b ##22 ENSGT00950000183190.a.a.b.c.b.b ##22 ENSGT00950000183190.a.a.b.c.b.a.a ##22 ENSGT00940000164927.a.a ENSGT00390000013141.a ENSGT00940000166937.b ENSGT00950000183149.C.b.c ENSGT00940000157136.b.b ENSGT01050000244824.B.db.b ENSGT00940000156618.c.a.a ENSGT01030000234597.a.b.a.b.e ENSGT01030000234633.A.a.b.a ENSGT00940000156852.d.b ENSGT00390000005861.a.a ENSGT00940000159075.B.j.b ENSGT00940000156546.`b.a.a Common carp reference MODERN SPECIES 34 tprb (ENSCCRG00000041197) pdcb (ENSCCRG00000059989) ptgs2b (ENSCCRG00000047699) PLA2G4A (ENSCCRG00000042045) arpc5b (ENSCCRG00000045534) HMCN1 (ENSCCRG00000012667) ivns1abpa (ENSCCRG00000022224) ENSCCRG00000079211 TRMT1L (ENSCCRG00000022240) niban1a (ENSCCRG00000022247) kifap3a (ENSCCRG00000022274) ntmt2 (ENSCCRG00000022893) gorab (ENSCCRG00000055088) prrx1b (ENSCCRG00000076310) ENSCCRG00000030163 ##22 ENSCCRG00000047315 ##22 slc25a24 (ENSCCRG00000047317) elp3 (ENSCCRG00000047319) si:ch211-63o20.7 (ENSCCRG00000054786) pnocb (ENSCCRG00000059629) znf395b (ENSCCRG00000005473) paqr8 (ENSCCRG00000072910) mcm3 (ENSCCRG00000005245) il17a/f3 (ENSCCRG00000067104) stmn4 (ENSCCRG00000074692) emilin1a (ENSCCRG00000075193) ankef1a (ENSCCRG00000034142) ENSCCRG00000057731 sccpdhb (ENSCCRG00000003293) cnstb (ENSCCRG00000061873) ENSCCRG00000023045 Goldfish MODERN SPECIES 12 ADAM17 (ENSCARG00000007700) cpsf3 (ENSCARG00000007650) asap2b (ENSCARG00000007402) e2f6 (ENSCARG00000007357) mboat2b (ENSCARG00000006068) kidins220b (ENSCARG00000005927) id2b (ENSCARG00000005906) lratd1 (ENSCARG00000005899) rnaseh1 (ENSCARG00000005871) rps7 (ENSCARG00000005846) allc (ENSCARG00000005816) ntmt2 (ENSCARG00000005808) gorab (ENSCARG00000005799) prrx1b (ENSCARG00000005769) ENSCARG00000005760 ##22 ENSCARG00000005722 ##22 slc25a24 (ENSCARG00000005688) elp3 (ENSCARG00000005669) si:ch211-63o20.7 (ENSCARG00000005660) pnocb (ENSCARG00000005656) znf395b (ENSCARG00000005649) paqr8 (ENSCARG00000005646) mcm3 (ENSCARG00000005596) il17a/f3 (ENSCARG00000005581) stmn4 (ENSCARG00000005572) emilin1a (ENSCARG00000005563) ankef1a (ENSCARG00000005555) snap25a (ENSCARG00000005536) sccpdhb (ENSCARG00000005286) cnstb (ENSCARG00000005271) ENSCARG00000005266 Cyprininae ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.c.b.b ##22 Cyprininae_a ANCESTRAL SPECIES 257 ENSGT00390000010743.a.a.b ENSGT01030000234606.b.e.b.d ENSGT00940000154654.a.b.h.c ENSGT00940000154614.qe ENSGT00940000155635.u.b ENSGT00390000001254.e ENSGT00530000063646.a.c ENSGT00940000154149.b.a.g.b.a ENSGT00390000003574.a.b ENSGT00390000008371.a.e ENSGT00390000008371.a.f ENSGT00390000014886.i ENSGT00940000159466.d.c.a ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b.a.b ##22 ENSGT00950000183190.a.a.b.c.b.b ##22 ENSGT00950000183190.a.a.b.c.b.a.a ##22 ENSGT00940000164927.a.a ENSGT00390000013141.a ENSGT00940000166937.b ENSGT00950000183149.C.b.c ENSGT00940000157136.b.b ENSGT01050000244824.B.db.b ENSGT00940000156618.c.a.a ENSGT01030000234597.a.b.a.b.e ENSGT01030000234633.A.a.b.a ENSGT00940000156852.d.b ENSGT00390000005861.a.a ENSGT00940000159075.B.j.b ENSGT00940000156546.`b.a.a ENSGT00390000010056.b.c Golden-line barbel MODERN SPECIES 259 scyl3 (ENSSGRG00000037353) prg4b (ENSSGRG00000037352) tprb (ENSSGRG00000037250) pdcb (ENSSGRG00000037240) ptgs2b (ENSSGRG00000036812) PLA2G4A (ENSSGRG00000036515) arpc5b (ENSSGRG00000036499) ivns1abpa (ENSSGRG00000036336) ENSSGRG00000036329 TRMT1L (ENSSGRG00000036324) kifap3a (ENSSGRG00000036160) ntmt2 (ENSSGRG00000036153) ENSSGRG00000036151 prrx1b (ENSSGRG00000036137) ENSSGRG00000036134 ##22 ENSSGRG00000036130 ##22 slc25a24 (ENSSGRG00000036074) elp3 (ENSSGRG00000035922) si:ch211-63o20.7 (ENSSGRG00000035921) pnocb (ENSSGRG00000035920) znf395b (ENSSGRG00000035919) mcm3 (ENSSGRG00000034715) il17a/f3 (ENSSGRG00000034707) stmn4 (ENSSGRG00000034706) emilin1a (ENSSGRG00000034705) ENSSGRG00000034703 snap25a (ENSSGRG00000034697) cnstb (ENSSGRG00000034696) sccpdhb (ENSSGRG00000034695) cnstb (ENSSGRG00000034694) hnrnpub (ENSSGRG00000034693) Zebrafish MODERN SPECIES 12 tprb (ENSDARG00000016630) pdcb (ENSDARG00000017634) ptgs2b (ENSDARG00000010276) PLA2G4A (ENSDARG00000017141) arpc5b (ENSDARG00000019062) ENSDARG00000016936 ivns1abpa (ENSDARG00000031100) ENSDARG00000094010 ENSDARG00000079036 TRMT1L (ENSDARG00000042057) niban1a (ENSDARG00000042055) kifap3a (ENSDARG00000008639) ntmt2 (ENSDARG00000042033) gorab (ENSDARG00000042031) prrx1b (ENSDARG00000042027) ENSDARG00000054723 ##22 slc25a24 (ENSDARG00000008568) elp3 (ENSDARG00000042005) si:ch211-63o20.7 (ENSDARG00000042000) pnocb (ENSDARG00000024189) znf395b (ENSDARG00000024195) paqr8 (ENSDARG00000088828) mcm3 (ENSDARG00000024204) stmn4 (ENSDARG00000030106) il17a/f3 (ENSDARG00000041976) emilin1a (ENSDARG00000024537) ankef1a (ENSDARG00000019135) snap25a (ENSDARG00000020609) sccpdhb (ENSDARG00000024564) cnstb (ENSDARG00000042759) ENSDARG00000024575 Clupeiformes ANCESTRAL SPECIES 178 ENSGT00530000063751.a.a ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b.h ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000164927.a ENSGT00940000156132.h ENSGT00940000157064.a.b.b.a.a.q ENSGT00940000157064.a.b.a ENSGT00390000004674.j ENSGT00390000004798 ENSGT00390000004674.i.b ENSGT00940000157607 ENSGT00940000154667.b.a Atlantic herring MODERN SPECIES 1 prg4b (ENSCHAG00000010290) tprb (ENSCHAG00000010540) pdcb (ENSCHAG00000014371) ptgs2b (ENSCHAG00000014478) PLA2G4A (ENSCHAG00000015900) arpc5b (ENSCHAG00000016442) HMCN1 (ENSCHAG00000016511) ivns1abpa (ENSCHAG00000017145) ENSCHAG00000017205 TRMT1L (ENSCHAG00000017235) niban1a (ENSCHAG00000017892) kifap3a (ENSCHAG00000018342) ntmt2 (ENSCHAG00000019275) gorab (ENSCHAG00000019279) prrx1b (ENSCHAG00000019285) ENSCHAG00000019331 ##22 slc25a24 (ENSCHAG00000019517) fam102bb (ENSCHAG00000020199) ENSCHAG00000020217 henmt1 (ENSCHAG00000020231) ENSCHAG00000020237 ENSCHAG00000020245 ENSCHAG00000020274 ENSCHAG00000020293 ENSCHAG00000020330 ENSCHAG00000020355 ENSCHAG00000020364 FNDC7 (ENSCHAG00000020405) stxbp3 (ENSCHAG00000020511) ENSCHAG00000020702 ENSCHAG00000020763 Denticle herring MODERN SPECIES 270 tbc1d7 (ENSDCDG00000013730) TGM1 (ENSDCDG00000013724) lmx1a (ENSDCDG00000013720) ENSDCDG00000013352 atf6 (ENSDCDG00000013319) ENSDCDG00000013317 ENSDCDG00000013314 TRMT1L (ENSDCDG00000012707) niban1a (ENSDCDG00000013239) kifap3a (ENSDCDG00000012684) ntmt2 (ENSDCDG00000012679) gorab (ENSDCDG00000012674) ENSDCDG00000012670 prrx1b (ENSDCDG00000012595) ENSDCDG00000012581 ENSDCDG00000012529 ##22 ENSDCDG00000012503 slc25a24 (ENSDCDG00000012454) fam102bb (ENSDCDG00000012430) ENSDCDG00000012401 ENSDCDG00000012389 ENSDCDG00000012379 ENSDCDG00000012363 stxbp3 (ENSDCDG00000010797) gpsm2l (ENSDCDG00000010764) ENSDCDG00000012296 Euteleosteomorpha ANCESTRAL SPECIES 70 ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00530000063498.B ENSGT00940000166530 ENSGT00940000157693 ENSGT00510000048988 ENSGT01030000234931 ENSGT00940000166725 ENSGT00390000003015.c ENSGT01030000235036 ENSGT00940000175705 Acanthomorphata ANCESTRAL SPECIES 91 ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.a.a.a ##22 ENSGT00940000155705.a.a ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b ENSGT00730000111085.A ENSGT00530000063498.B Euacanthomorphacea ANCESTRAL SPECIES 59 ENSGT00730000111014.o.b ENSGT00940000156236.a.a ENSGT00390000010743.a.a ENSGT01030000234606.b.e.b ENSGT00940000154654.a.b ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b ENSGT00730000111085.A ENSGT00530000063498.B Pinecone sodierfish MODERN SPECIES 18 FCHO1 (ENSMMDG00005000756) prg4b (ENSMMDG00005000699) tprb (ENSMMDG00005000569) pdcb (ENSMMDG00005000506) ptgs2b (ENSMMDG00005000495) PLA2G4A (ENSMMDG00005000444) arpc5b (ENSMMDG00005000422) ivns1abpa (ENSMMDG00005000333) ENSMMDG00005000317 TRMT1L (ENSMMDG00005000167) niban1a (ENSMMDG00005015756) kifap3a (ENSMMDG00005015465) ntmt2 (ENSMMDG00005015445) gorab (ENSMMDG00005015441) prrx1b (ENSMMDG00005015436) ENSMMDG00005015432 ##22 MAST2 (ENSMMDG00005015365) PIK3R3 (ENSMMDG00005014769) TSPAN1 (ENSMMDG00005014716) pomgnt1 (ENSMMDG00005014683) ifit15 (ENSMMDG00005014678) prpf38a (ENSMMDG00005014677) orc1 (ENSMMDG00005014662) ENSMMDG00005014656 ENSMMDG00005014580 pycr3 (ENSMMDG00005014576) bmb (ENSMMDG00005014575) GFUS (ENSMMDG00005014534) serpinb1 (ENSMMDG00005014528) MYLK4 (ENSMMDG00005014524) gmds (ENSMMDG00005014457) Percomorphaceae ANCESTRAL SPECIES 52 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d ENSGT01030000234528.B.b.b.bb.a Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Ovalentaria ANCESTRAL SPECIES 9 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Ovalentaria_B ANCESTRAL SPECIES 67 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h Pomacentridae ANCESTRAL SPECIES 143 ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Pomacentridae_A ANCESTRAL SPECIES 153 ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00950000182930.C.f ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 Amphiprion ANCESTRAL SPECIES 162 ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00730000111147 ENSGT00940000165304 ENSGT00500000044869.a.b ENSGT00530000063553.b.a ENSGT00940000160141.e.b ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Orange clownfish MODERN SPECIES 11 ENSAPEG00000021093 ENSAPEG00000021103 cherp (ENSAPEG00000021128) dohh (ENSAPEG00000021227) RSPH6A (ENSAPEG00000021256) LONP1 (ENSAPEG00000021281) LRRC24 (ENSAPEG00000021375) prpf38a (ENSAPEG00000021414) TRMT1L (ENSAPEG00000021433) ENSAPEG00000021578 niban1a (ENSAPEG00000021593) ntmt2 (ENSAPEG00000021627) gorab (ENSAPEG00000021657) prrx1b (ENSAPEG00000021672) ENSAPEG00000021740 ##22 ENSAPEG00000021770 ##22 ENSAPEG00000021785 ENSAPEG00000021822 ENSAPEG00000021887 ENSAPEG00000021991 lrrc40 (ENSAPEG00000022030) ENSAPEG00000022042 phb2b (ENSAPEG00000022060) pde6d (ENSAPEG00000022089) rpl36 (ENSAPEG00000022120) ENSAPEG00000022136 lmnb2 (ENSAPEG00000022153) commd2 (ENSAPEG00000022198) TRAPPC8 (ENSAPEG00000022218) ctns (ENSAPEG00000022299) zgc:171480 (ENSAPEG00000022327) Clown anemonefish MODERN SPECIES 3442 ENSAOCG00000010284 ##22 MAST2 (ENSAOCG00000010200) Spiny chromis MODERN SPECIES 1961 ENSAPOG00000023195 ##22 ENSAPOG00000023281 ##22 Bicolor damselfish MODERN SPECIES 454 TRMT1L (ENSSPAG00000008597) niban1a (ENSSPAG00000008668) ntmt2 (ENSSPAG00000008693) gorab (ENSSPAG00000008717) prrx1b (ENSSPAG00000008734) ENSSPAG00000008763 ENSSPAG00000008773 ENSSPAG00000008804 ##22 MAST2 (ENSSPAG00000009021) Cichlidae ANCESTRAL SPECIES 90 ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h Midas cichlid MODERN SPECIES 794 ntmt2 (ENSACIG00000011636) ENSACIG00000011646 prrx1b (ENSACIG00000011679) ENSACIG00000011691 ENSACIG00000011695 ##22 MAST2 (ENSACIG00000011722) PIK3R3 (ENSACIG00000011810) Pseudocrenilabrinae ANCESTRAL SPECIES 23 ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 ENSGT01050000244924.a.a.b.a.a ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000011521 ENSGT00940000153456.a ENSGT00940000164676 ENSGT00940000155265.b.b.a ENSGT00940000155265.b.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 ENSGT00940000161068 ENSGT00940000162747 Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT00940000157967 ENSGT00390000007310 ENSGT01050000244924.a.a.b.a.a ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000011521 ENSGT00940000153456.a ENSGT00940000164676 ENSGT00940000155265.b.b.a ENSGT00940000155265.b.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 ENSGT00940000161068 ENSGT00940000162747 Haplochromini ANCESTRAL SPECIES 9 ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 ENSGT01050000244924.a.a.b.a.a ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000011521 ENSGT00940000153456.a ENSGT00940000164676 ENSGT00940000155265.b.b.a ENSGT00940000155265.b.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 ENSGT00940000161068 ENSGT00940000162747 Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 ENSGT01050000244924.a.a.b.a.a ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000011521 ENSGT00940000153456.a ENSGT00940000164676 ENSGT00940000155265.b.b.a ENSGT00940000155265.b.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 ENSGT00940000161068 ENSGT00940000162747 P. nyererei DUPLICATION P. nyererei MODERN SPECIES 352 zbtb37 (ENSPNYG00000004925) serpinc1 (ENSPNYG00000004943) stil (ENSPNYG00000004977) PTBP1 (ENSPNYG00000005088) ENSPNYG00000005126 b4galt6 (ENSPNYG00000005170) ENSPNYG00000005295 orc1 (ENSPNYG00000005399) prpf38a (ENSPNYG00000005571) TRMT1L (ENSPNYG00000005607) niban1a (ENSPNYG00000005714) ntmt2 (ENSPNYG00000005741) gorab (ENSPNYG00000005764) prrx1b (ENSPNYG00000005779) ENSPNYG00000005802 ENSPNYG00000005840 ##22 ENSPNYG00000005927 ##22 ENSPNYG00000005948 MAST2 (ENSPNYG00000005999) PIK3R3 (ENSPNYG00000006124) TSPAN1 (ENSPNYG00000006163) pomgnt1 (ENSPNYG00000006249) ENSPNYG00000006347 P. nyererei MODERN SPECIES 352 serpinc1 (ENSPNYG00000004943) stil (ENSPNYG00000004977) PTBP1 (ENSPNYG00000005088) ENSPNYG00000005126 b4galt6 (ENSPNYG00000005170) ENSPNYG00000005295 orc1 (ENSPNYG00000005399) prpf38a (ENSPNYG00000005571) TRMT1L (ENSPNYG00000005607) niban1a (ENSPNYG00000005714) ntmt2 (ENSPNYG00000005741) gorab (ENSPNYG00000005764) prrx1b (ENSPNYG00000005779) ENSPNYG00000005802 ENSPNYG00000005840 ##22 ENSPNYG00000005927 ##22 ENSPNYG00000005948 MAST2 (ENSPNYG00000005999) PIK3R3 (ENSPNYG00000006124) TSPAN1 (ENSPNYG00000006163) pomgnt1 (ENSPNYG00000006249) ENSPNYG00000006347 Haplochromini_B ANCESTRAL SPECIES 32 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 ENSGT01050000244924.a.a.b.a.a ENSGT00940000158019 ENSGT01030000234624.b.b.c.a.a ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT01100000263526.A.b.b.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00390000011521 ENSGT00940000153456.a ENSGT00940000164676 ENSGT00940000155265.b.b.a ENSGT00940000155265.b.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 ENSGT00940000161068 Zebra mbuna MODERN SPECIES 1099 s1pr1 (ENSMZEG00005017898) zbtb37 (ENSMZEG00005017894) serpinc1 (ENSMZEG00005017887) stil (ENSMZEG00005017883) PTBP1 (ENSMZEG00005017871) b4galt6 (ENSMZEG00005017863) ENSMZEG00005017856 orc1 (ENSMZEG00005017849) prpf38a (ENSMZEG00005017838) TRMT1L (ENSMZEG00005017822) niban1a (ENSMZEG00005017810) ntmt2 (ENSMZEG00005017803) gorab (ENSMZEG00005017799) prrx1b (ENSMZEG00005017793) ENSMZEG00005017790 ENSMZEG00005017755 ##22 ENSMZEG00005017738 MAST2 (ENSMZEG00005017705) ENSMZEG00005017693 ENSMZEG00005017689 PIK3R3 (ENSMZEG00005017674) TSPAN1 (ENSMZEG00005017399) pomgnt1 (ENSMZEG00005017376) ENSMZEG00005017372 ENSMZEG00005017370 ENSMZEG00005017365 C8orf82 (ENSMZEG00005017362) naprt (ENSMZEG00005017359) ENSMZEG00005017341 ENSMZEG00005017329 ENSMZEG00005017321 Eastern happy MODERN SPECIES 8 s1pr1 (ENSACLG00000021207) zbtb37 (ENSACLG00000021221) serpinc1 (ENSACLG00000021255) stil (ENSACLG00000021285) PTBP1 (ENSACLG00000021320) b4galt6 (ENSACLG00000021413) ENSACLG00000021460 orc1 (ENSACLG00000021540) prpf38a (ENSACLG00000021595) TRMT1L (ENSACLG00000021625) niban1a (ENSACLG00000021721) ntmt2 (ENSACLG00000021750) gorab (ENSACLG00000021784) prrx1b (ENSACLG00000021807) ENSACLG00000021864 ##22 ENSACLG00000021880 ##22 ENSACLG00000021965 MAST2 (ENSACLG00000021999) ENSACLG00000022106 PIK3R3 (ENSACLG00000022144) ENSACLG00000022208 ENSACLG00000022219 TSPAN1 (ENSACLG00000022250) pomgnt1 (ENSACLG00000022347) ENSACLG00000022477 ENSACLG00000022528 ENSACLG00000022533 C8orf82 (ENSACLG00000022537) naprt (ENSACLG00000022543) ENSACLG00000022573 ENSACLG00000022801 Burton s mouthbrooder MODERN SPECIES 493 GGACT (ENSHBUG00000000819) GGACT (ENSHBUG00000020671) ENSHBUG00000020644 GGACT (ENSHBUG00000020632) arl13b (ENSHBUG00000020619) orc1 (ENSHBUG00000020582) prpf38a (ENSHBUG00000020572) TRMT1L (ENSHBUG00000000622) ENSHBUG00000020432 niban1a (ENSHBUG00000020416) kifap3a (ENSHBUG00000020394) ntmt2 (ENSHBUG00000020336) gorab (ENSHBUG00000020307) prrx1b (ENSHBUG00000020291) ENSHBUG00000020264 ENSHBUG00000020249 ##22 ENSHBUG00000020235 ENSHBUG00000020193 PIK3R3 (ENSHBUG00000020098) Nile tilapia MODERN SPECIES 8 zbtb37 (ENSONIG00000007779) serpinc1 (ENSONIG00000007781) PTBP1 (ENSONIG00000007784) b4galt6 (ENSONIG00000007793) ENSONIG00000007798 orc1 (ENSONIG00000007807) ENSONIG00000007813 prpf38a (ENSONIG00000007816) TRMT1L (ENSONIG00000007823) fam129a (ENSONIG00000007826) kifap3a (ENSONIG00000007836) ntmt2 (ENSONIG00000007840) gorab (ENSONIG00000007842) prrx1b (ENSONIG00000007843) ENSONIG00000039886 ##22 ENSONIG00000007844 ##22 MAST2 (ENSONIG00000007847) PIK3R3 (ENSONIG00000007853) TSPAN1 (ENSONIG00000007856) pomgnt1 (ENSONIG00000007857) ENSONIG00000020776 C8orf82 (ENSONIG00000019480) naprt (ENSONIG00000019479) ENSONIG00000019477 ENSONIG00000019475 ENSONIG00000019474 ADCYAP1R1 (ENSONIG00000019468) ENSONIG00000036103 ENSONIG00000019464 ENSONIG00000034020 ENSONIG00000030697 Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00390000010568 ENSGT00940000159571 ENSGT00940000156511.b.db ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT01050000245196 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 Oryzias ANCESTRAL SPECIES 122 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000175770 Oryzias_a ANCESTRAL SPECIES 173 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000175770 Japanese Medaka HdrR DUPLICATION Japanese Medaka HdrR MODERN SPECIES 18 ENSORLG00000023535 ENSORLG00000025133 ENSORLG00000030411 prpf38a (ENSORLG00000013485) ENSORLG00000025334 ENSORLG00000027426 ENSORLG00000030583 ENSORLG00000028533 TRMT1L (ENSORLG00000029610) niban1a (ENSORLG00000013464) ntmt2 (ENSORLG00000013457) gorab (ENSORLG00000028635) prrx1b (ENSORLG00000013440) ENSORLG00000013423 ENSORLG00000013416 ##22 ENSORLG00000028206 ##22 ENSORLG00000013400 ENSORLG00000025670 ENSORLG00000013387 MAST2 (ENSORLG00000022224) PIK3R3 (ENSORLG00000013341) TSPAN1 (ENSORLG00000013306) pomgnt1 (ENSORLG00000013292) ENSORLG00000022581 ENSORLG00000013234 gadd45ba (ENSORLG00000025626) ENSORLG00000026943 ENSORLG00000029124 APC2 (ENSORLG00000013214) ENSORLG00000029048 reep6 (ENSORLG00000013179) Japanese Medaka HdrR MODERN SPECIES 18 ENSORLG00000030196 ENSORLG00000023535 ENSORLG00000025133 ENSORLG00000030411 prpf38a (ENSORLG00000013485) ENSORLG00000025334 ENSORLG00000027426 ENSORLG00000030583 ENSORLG00000028533 TRMT1L (ENSORLG00000029610) niban1a (ENSORLG00000013464) ntmt2 (ENSORLG00000013457) gorab (ENSORLG00000028635) prrx1b (ENSORLG00000013440) ENSORLG00000013423 ENSORLG00000013416 ##22 ENSORLG00000028206 ##22 ENSORLG00000013400 ENSORLG00000025670 ENSORLG00000013387 MAST2 (ENSORLG00000022224) PIK3R3 (ENSORLG00000013341) TSPAN1 (ENSORLG00000013306) pomgnt1 (ENSORLG00000013292) ENSORLG00000022581 ENSORLG00000013234 gadd45ba (ENSORLG00000025626) ENSORLG00000026943 ENSORLG00000029124 APC2 (ENSORLG00000013214) ENSORLG00000029048 Oryzias_b ANCESTRAL SPECIES 102 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g.u ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A Javanese ricefish MODERN SPECIES 18 ENSOJAG00000001177 ENSOJAG00000001175 ENSOJAG00000001173 orc1 (ENSOJAG00000001168) prpf38a (ENSOJAG00000001163) ENSOJAG00000001158 ENSOJAG00000001156 ENSOJAG00000001148 TRMT1L (ENSOJAG00000001049) niban1a (ENSOJAG00000001008) ntmt2 (ENSOJAG00000000993) gorab (ENSOJAG00000000989) prrx1b (ENSOJAG00000000972) ENSOJAG00000000957 ##22 ENSOJAG00000000952 ENSOJAG00000000944 ##22 MAST2 (ENSOJAG00000000849) ENSOJAG00000000835 ENSOJAG00000000832 PIK3R3 (ENSOJAG00000000818) TSPAN1 (ENSOJAG00000000803) pomgnt1 (ENSOJAG00000000425) ENSOJAG00000000109 CARTPT (ENSOJAG00000000091) gadd45ba (ENSOJAG00000000064) DIRAS1 (ENSOJAG00000012742) ENSOJAG00000012730 ENSOJAG00000012719 ENSOJAG00000012711 reep6 (ENSOJAG00000012696) gpx7 (ENSOJAG00000012658) Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00390000010568 ENSGT00940000159571 ENSGT00940000169015 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g.x ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.g.w Aplocheiloidei ANCESTRAL SPECIES 184 ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000175770 ENSGT01050000245196 ENSGT00940000155705.b ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.g.w Mangrove rivulus MODERN SPECIES 280 ENSKMAG00000010287 ENSKMAG00000010296 TRMT1L (ENSKMAG00000010310) niban1a (ENSKMAG00000010363) kifap3a (ENSKMAG00000010433) ntmt2 (ENSKMAG00000010477) gorab (ENSKMAG00000010496) prrx1b (ENSKMAG00000010521) ENSKMAG00000010538 ENSKMAG00000010569 ##22 ENSKMAG00000010625 MAST2 (ENSKMAG00000010659) PIK3R3 (ENSKMAG00000010703) TSPAN1 (ENSKMAG00000010749) pomgnt1 (ENSKMAG00000010794) ENSKMAG00000010888 ENSKMAG00000010903 zgc:113223 (ENSKMAG00000010909) ENSKMAG00000010923 sgta (ENSKMAG00000010962) ENSKMAG00000010996 ENSKMAG00000011002 ENSKMAG00000011031 ENSKMAG00000011076 ENSKMAG00000011111 Cyprinodontoidei ANCESTRAL SPECIES 156 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Poeciliinae ANCESTRAL SPECIES 245 ENSGT01100000265196 ENSGT00950000183190.a.a.b.c.b ##22 Poecilia ANCESTRAL SPECIES 306 ENSGT01100000265196 ENSGT00950000183190.a.a.b.c.b ##22 NAME_6 ANCESTRAL SPECIES 812 ENSGT01100000265196 ENSGT00950000183190.a.a.b.c.b ##22 Sailfin molly MODERN SPECIES 541 ENSPLAG00000009870 ENSPLAG00000010234 ENSPLAG00000010267 ENSPLAG00000010276 ENSPLAG00000010288 prpf38a (ENSPLAG00000010328) ENSPLAG00000010339 TRMT1L (ENSPLAG00000010387) niban1a (ENSPLAG00000010397) kifap3a (ENSPLAG00000010447) ntmt2 (ENSPLAG00000010468) gorab (ENSPLAG00000010475) prrx1b (ENSPLAG00000010488) ENSPLAG00000010497 ENSPLAG00000010510 ENSPLAG00000010513 ##22 Platyfish MODERN SPECIES 23 prpf38a (ENSXMAG00000026143) ENSXMAG00000025535 ENSXMAG00000026571 ENSXMAG00000027867 ENSXMAG00000012288 TRMT1L (ENSXMAG00000003575) niban1a (ENSXMAG00000005465) kifap3a (ENSXMAG00000005452) ntmt2 (ENSXMAG00000028054) gorab (ENSXMAG00000005448) prrx1b (ENSXMAG00000005444) ENSXMAG00000019870 ENSXMAG00000025566 ENSXMAG00000020975 ENSXMAG00000025454 ENSXMAG00000005419 ##22 MAST2 (ENSXMAG00000005398) PIK3R3 (ENSXMAG00000005376) TSPAN1 (ENSXMAG00000005620) pomgnt1 (ENSXMAG00000005621) ENSXMAG00000028305 ENSXMAG00000021979 ENSXMAG00000027015 ENSXMAG00000021871 ENSXMAG00000000617 ENSXMAG00000027702 ENSXMAG00000022348 ENSXMAG00000027664 ENSXMAG00000026287 ENSXMAG00000025456 sgta (ENSXMAG00000023333) NAME_4 ANCESTRAL SPECIES 530 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Mummichog MODERN SPECIES 714 ENSFHEG00000009244 ##22 ENSFHEG00000009285 ##22 ENSFHEG00000009297 ##22 ENSFHEG00000009338 MAST2 (ENSFHEG00000009383) PIK3R3 (ENSFHEG00000009432) Sheepshead minnow MODERN SPECIES 1243 ENSCVAG00000015310 ENSCVAG00000015319 ENSCVAG00000015327 ##22 ENSCVAG00000015351 Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000165098 ENSGT00940000177981 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00950000183190.a.a.a.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 Anabantaria ANCESTRAL SPECIES 7 ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Anabantoidei ANCESTRAL SPECIES 6 ENSGT00950000183171.A.b.a.b ENSGT00940000159037 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Climbing perch MODERN SPECIES 17 ENSATEG00000004759 ENSATEG00000004709 ENSATEG00000004698 ENSATEG00000004678 ENSATEG00000004658 ENSATEG00000013279 ENSATEG00000004619 ENSATEG00000004608 ENSATEG00000004573 niban1a (ENSATEG00000004540) kifap3a (ENSATEG00000004457) ntmt2 (ENSATEG00000029904) gorab (ENSATEG00000004422) prrx1b (ENSATEG00000004399) ENSATEG00000004346 ##22 ENSATEG00000004325 ##22 PIK3R3 (ENSATEG00000004078) ENSATEG00000004022 POMGNT1 (ENSATEG00000003917) ENSATEG00000003903 ENSATEG00000030160 ENSATEG00000003890 ENSATEG00000028259 ENSATEG00000003849 ENSATEG00000003823 RHPN1 (ENSATEG00000003810) ENSATEG00000003758 mafaa (ENSATEG00000028752) ZC3H3 (ENSATEG00000003718) ENSATEG00000003655 ENSATEG00000003542 Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000007757 thop1 (ENSBSLG00000008008) sgta (ENSBSLG00000009554) nrd1b (ENSBSLG00000009863) ENSBSLG00000011312 orc1 (ENSBSLG00000011328) prpf38a (ENSBSLG00000011340) TRMT1L (ENSBSLG00000011357) niban1a (ENSBSLG00000011377) kifap3a (ENSBSLG00000011776) ntmt2 (ENSBSLG00000012402) ENSBSLG00000012437 gorab (ENSBSLG00000012442) prrx1b (ENSBSLG00000012451) ENSBSLG00000013051 ##22 ENSBSLG00000013139 ##22 ENSBSLG00000013235 ENSBSLG00000013282 PIK3R3 (ENSBSLG00000013563) ENSBSLG00000013679 TSPAN1 (ENSBSLG00000013694) pomgnt1 (ENSBSLG00000013715) ENSBSLG00000013811 ENSBSLG00000013818 ENSBSLG00000013834 ENSBSLG00000013854 ENSBSLG00000013870 si:ch211-284e20.8 (ENSBSLG00000013880) NOS1AP (ENSBSLG00000013889) ENSBSLG00000013927 pycr3 (ENSBSLG00000013948) Zig-zag eel MODERN SPECIES 18 reep6 (ENSMAMG00000015545) ENSMAMG00000015528 ENSMAMG00000015485 ENSMAMG00000015518 ENSMAMG00000015463 ENSMAMG00000015431 ENSMAMG00000026330 ENSMAMG00000027044 ENSMAMG00000015305 niban1a (ENSMAMG00000015296) kifap3a (ENSMAMG00000015251) ntmt2 (ENSMAMG00000015231) gorab (ENSMAMG00000024412) prrx1b (ENSMAMG00000015198) ENSMAMG00000015173 ##22 ENSMAMG00000015165 ##22 ENSMAMG00000015160 ##22 MAST2 (ENSMAMG00000015099) PIK3R3 (ENSMAMG00000015060) TSPAN1 (ENSMAMG00000015037) pomgnt1 (ENSMAMG00000014990) ENSMAMG00000014977 ENSMAMG00000015400 ENSMAMG00000014948 ENSMAMG00000014890 RHPN1 (ENSMAMG00000014859) ENSMAMG00000014818 mafaa (ENSMAMG00000014803) ZC3H3 (ENSMAMG00000014787) ENSMAMG00000014735 ENSMAMG00000014718 Carangaria ANCESTRAL SPECIES 7 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Carangaria_A ANCESTRAL SPECIES 73 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b Seriola ANCESTRAL SPECIES ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d ENSGT01030000234528.B.b.b.bb.a ENSGT00940000155265.b.b.b ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000154573 ENSGT00390000004681.a.a ENSGT00740000115898 ENSGT00950000183044.a.b ENSGT00950000183014.f.b.b.a.a ENSGT01090000260029.a.a.b.a.b ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a Greater amberjack DUPLICATION Greater amberjack MODERN SPECIES 73 atpaf1 (ENSSDUG00000021892) mafaa (ENSSDUG00000021887) ZC3H3 (ENSSDUG00000021871) ENSSDUG00000021862 ENSSDUG00000021851 ADCYAP1R1 (ENSSDUG00000021845) ENSSDUG00000021837 ENSSDUG00000021831 TRMT1L (ENSSDUG00000021807) niban1a (ENSSDUG00000021794) kifap3a (ENSSDUG00000021766) ntmt2 (ENSSDUG00000021747) gorab (ENSSDUG00000021741) prrx1b (ENSSDUG00000021734) ENSSDUG00000021730 ENSSDUG00000021725 ##22 ENSSDUG00000021712 ##22 ENSSDUG00000021705 ENSSDUG00000021696 SERPINB1 (ENSSDUG00000021682) GFUS (ENSSDUG00000021667) GFUS (ENSSDUG00000021654) bmb (ENSSDUG00000021603) pycr3 (ENSSDUG00000021591) ENSSDUG00000021580 ENSSDUG00000021572 NOS1AP (ENSSDUG00000021563) ENSSDUG00000021560 ENSSDUG00000021518 rgs4 (ENSSDUG00000021499) rgs5a (ENSSDUG00000021486) Greater amberjack MODERN SPECIES 73 mafaa (ENSSDUG00000021887) ZC3H3 (ENSSDUG00000021871) ENSSDUG00000021862 ENSSDUG00000021851 ADCYAP1R1 (ENSSDUG00000021845) ENSSDUG00000021837 ENSSDUG00000021831 TRMT1L (ENSSDUG00000021807) niban1a (ENSSDUG00000021794) kifap3a (ENSSDUG00000021766) ntmt2 (ENSSDUG00000021747) gorab (ENSSDUG00000021741) prrx1b (ENSSDUG00000021734) ENSSDUG00000021730 ENSSDUG00000021725 ##22 ENSSDUG00000021712 ##22 ENSSDUG00000021705 ENSSDUG00000021696 SERPINB1 (ENSSDUG00000021682) GFUS (ENSSDUG00000021667) GFUS (ENSSDUG00000021654) bmb (ENSSDUG00000021603) pycr3 (ENSSDUG00000021591) ENSSDUG00000021580 ENSSDUG00000021572 NOS1AP (ENSSDUG00000021563) ENSSDUG00000021560 ENSSDUG00000021518 rgs4 (ENSSDUG00000021499) rgs5a (ENSSDUG00000021486) rgs16 (ENSSDUG00000021481) Yellowtail amberjack MODERN SPECIES 3176 mafaa (ENSSLDG00000016154) ZC3H3 (ENSSLDG00000016166) ENSSLDG00000016189 ENSSLDG00000016216 ADCYAP1R1 (ENSSLDG00000016253) ENSSLDG00000016289 ENSSLDG00000016313 ENSSLDG00000016388 TRMT1L (ENSSLDG00000016579) niban1a (ENSSLDG00000016719) kifap3a (ENSSLDG00000016743) ntmt2 (ENSSLDG00000016809) gorab (ENSSLDG00000016829) prrx1b (ENSSLDG00000016851) ENSSLDG00000016872 ENSSLDG00000016881 ##22 SERPINB1 (ENSSLDG00000016912) GFUS (ENSSLDG00000016998) SERPINB1 (ENSSLDG00000017322) bmb (ENSSLDG00000017363) pycr3 (ENSSLDG00000017378) ENSSLDG00000017392 ENSSLDG00000017410 NOS1AP (ENSSLDG00000017424) ENSSLDG00000017453 ENSSLDG00000017469 rgs4 (ENSSLDG00000017481) rgs5a (ENSSLDG00000017492) rgs16 (ENSSLDG00000017516) rgs8 (ENSSLDG00000017534) ENSSLDG00000017551 Barramundi perch MODERN SPECIES 12 nrd1b (ENSLCAG00010008718) ENSLCAG00010009145 ENSLCAG00010009157 ENSLCAG00010009169 ENSLCAG00010009173 ENSLCAG00010009176 prpf38a (ENSLCAG00010009186) ENSLCAG00010009197 TRMT1L (ENSLCAG00010009200) niban1a (ENSLCAG00010009219) kifap3a (ENSLCAG00010009279) ntmt2 (ENSLCAG00010009328) gorab (ENSLCAG00010009330) prrx1b (ENSLCAG00010009338) ENSLCAG00010009348 ##22 ENSLCAG00010009351 ##22 MAST2 (ENSLCAG00010009380) Pleuronectoidei ANCESTRAL SPECIES 20 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000180612 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 Turbot MODERN SPECIES 3 ENSSMAG00000015337 ENSSMAG00000037635 ENSSMAG00000015352 ENSSMAG00000015379 ENSSMAG00000024407 ENSSMAG00000034311 ENSSMAG00000036494 ENSSMAG00000025993 ENSSMAG00000015425 niban1a (ENSSMAG00000015548) kifap3a (ENSSMAG00000015597) ntmt2 (ENSSMAG00000015625) gorab (ENSSMAG00000015639) prrx1b (ENSSMAG00000015646) ENSSMAG00000022440 ENSSMAG00000015681 ##22 ENSSMAG00000015713 ENSSMAG00000015873 TSPAN1 (ENSSMAG00000015857) ENSSMAG00000015944 ENSSMAG00000015980 ENSSMAG00000016012 ENSSMAG00000026133 ENSSMAG00000016072 RHPN1 (ENSSMAG00000016240) ENSSMAG00000034624 mafaa (ENSSMAG00000016291) ZC3H3 (ENSSMAG00000016302) ENSSMAG00000016316 ENSSMAG00000016363 ENSSMAG00000016396 Tongue sole MODERN SPECIES 11 ttll9 (ENSCSEG00000001500) nrd1b (ENSCSEG00000001310) RAB3B (ENSCSEG00000001290) ENSCSEG00000001287 ENSCSEG00000001281 orc1 (ENSCSEG00000001275) prpf38a (ENSCSEG00000001269) ENSCSEG00000001267 TRMT1L (ENSCSEG00000001248) niban1a (ENSCSEG00000001233) kifap3a (ENSCSEG00000001211) ntmt2 (ENSCSEG00000001207) gorab (ENSCSEG00000001201) prrx1b (ENSCSEG00000001187) ENSCSEG00000001183 ENSCSEG00000001139 ##22 MAST2 (ENSCSEG00000001119) PIK3R3 (ENSCSEG00000001100) ENSCSEG00000001097 TSPAN1 (ENSCSEG00000001092) pomgnt1 (ENSCSEG00000001071) ENSCSEG00000001066 ENSCSEG00000001059 C1QTNF7 (ENSCSEG00000001054) CC2D2A (ENSCSEG00000000953) fbxl5 (ENSCSEG00000000935) NEK1 (ENSCSEG00000000891) sh3rf1 (ENSCSEG00000000874) cbr4 (ENSCSEG00000000862) PALLD (ENSCSEG00000000851) ENSCSEG00000000846 Eupercaria ANCESTRAL SPECIES 8 ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 ENSGT00940000160231 ENSGT00940000159037 ENSGT00950000183171.A.b.a.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000008371.a ENSGT00390000014886 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a.d ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d ENSGT00940000164676 Fugu MODERN SPECIES 12 ENSTRUG00000029944 ENSTRUG00000000240 nfia (ENSTRUG00000013602) ENSTRUG00000030817 nrd1b (ENSTRUG00000028772) ENSTRUG00000026216 ENSTRUG00000027475 ENSTRUG00000030568 orc1 (ENSTRUG00000003887) prpf38a (ENSTRUG00000003374) TRMT1L (ENSTRUG00000002396) niban1a (ENSTRUG00000002101) ntmt2 (ENSTRUG00000001965) gorab (ENSTRUG00000033490) ENSTRUG00000020341 ##22 ENSTRUG00000003483 ##22 MAST2 (ENSTRUG00000026427) PIK3R3 (ENSTRUG00000000148) TSPAN1 (ENSTRUG00000033498) pomgnt1 (ENSTRUG00000030797) ENSTRUG00000001292 gpx7 (ENSTRUG00000029634) ENSTRUG00000033071 TUT4 (ENSTRUG00000024719) RHPN1 (ENSTRUG00000002685) atpaf1 (ENSTRUG00000033403) ENSTRUG00000032031 ENSTRUG00000028921 ENSTRUG00000002572 pacap1b (ENSTRUG00000004289) ENSTRUG00000021833 Tetraodon MODERN SPECIES 26 ENSTNIG00000001074 hccsb (ENSTNIG00000014170) ENSTNIG00000001067 ENSTNIG00000014171 ENSTNIG00000014172 ENSTNIG00000014173 cacna1fb (ENSTNIG00000014174) ankrd49 (ENSTNIG00000014179) GPR83 (ENSTNIG00000014180) cdk2ap2 (ENSTNIG00000014181) aip (ENSTNIG00000014182) HACE1 (ENSTNIG00000014201) bves (ENSTNIG00000014202) ENSTNIG00000014204 ENSTNIG00000014236 ENSTNIG00000014237 ##22 tfap2b (ENSTNIG00000014239) tfap2b (ENSTNIG00000014240) ENSTNIG00000014241 PPP1R14A (ENSTNIG00000014242) tiprl (ENSTNIG00000014243) blnk (ENSTNIG00000001501) dntt (ENSTNIG00000017078) ENSTNIG00000017079 ENSTNIG00000017080 vox (ENSTNIG00000001621) KNDC1 (ENSTNIG00000017081) ADGRA1 (ENSTNIG00000017082) ENSTNIG00000017083 ENSTNIG00000017084 ENSTNIG00000000187 Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00940000165098 ENSGT00940000177981 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Perciformes ANCESTRAL SPECIES 8 ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d ENSGT01030000234528.B.b.b.bb.a Perciformes_a ANCESTRAL SPECIES 6 ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000177981 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d ENSGT01030000234528.B.b.b.bb.a Channel bull blenny MODERN SPECIES 18 ENSCGOG00000000376 ENSCGOG00000000381 ENSCGOG00000000385 ENSCGOG00000000386 ENSCGOG00000000387 ENSCGOG00000000390 ENSCGOG00000000391 prpf38a (ENSCGOG00000000397) TRMT1L (ENSCGOG00000000402) niban1a (ENSCGOG00000000421) kifap3a (ENSCGOG00000000499) ntmt2 (ENSCGOG00000000587) gorab (ENSCGOG00000000591) prrx1b (ENSCGOG00000000597) ENSCGOG00000000611 ##22 ENSCGOG00000000618 ##22 ENSCGOG00000000631 MAST2 (ENSCGOG00000000759) ENSCGOG00000001155 pomgnt1 (ENSCGOG00000001217) TSPAN1 (ENSCGOG00000001243) ENSCGOG00000001245 gpx7 (ENSCGOG00000001250) TUT4 (ENSCGOG00000001260) RHPN1 (ENSCGOG00000001518) atpaf1 (ENSCGOG00000001729) mafaa (ENSCGOG00000001737) ZC3H3 (ENSCGOG00000001742) ENSCGOG00000001749 ENSCGOG00000001755 ENSCGOG00000001772 Pike perch MODERN SPECIES 203 ENSSLUG00000016330 ENSSLUG00000016332 ENSSLUG00000016334 ENSSLUG00000016336 ENSSLUG00000016339 ENSSLUG00000016340 ENSSLUG00000016342 zgc:103559 (ENSSLUG00000016348) TRMT1L (ENSSLUG00000016365) niban1a (ENSSLUG00000016372) kifap3a (ENSSLUG00000016487) ntmt2 (ENSSLUG00000018843) gorab (ENSSLUG00000018848) prrx1b (ENSSLUG00000018855) ENSSLUG00000018882 ##22 ENSSLUG00000018904 ##22 MAST2 (ENSSLUG00000019061) Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00950000182916.a.b.a.a.a.a.e.b ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00390000013973.A.a.c.b.b ENSGT00940000155026.d ENSGT00940000159943 ENSGT00530000063498.B ENSGT00730000111085.A ENSGT00950000182946.lb.b.g ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.b ##22 ENSGT00940000155705.b ENSGT00940000156259.a.a ENSGT00940000158851 ENSGT00530000063632.A ENSGT00950000182946.lb.b.h ENSGT00730000114327 ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a ENSGT00390000012765 ENSGT00940000162747 ENSGT00940000161068 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d European seabass MODERN SPECIES 17 ENSDLAG00005030797 ENSDLAG00005021292 ENSDLAG00005006324 ENSDLAG00005031368 ENSDLAG00005027689 ENSDLAG00005021756 ENSDLAG00005006336 ENSDLAG00005006371 niban1a (ENSDLAG00005030465) kifap3a (ENSDLAG00005006960) ntmt2 (ENSDLAG00005007122) gorab (ENSDLAG00005034105) ENSDLAG00005029644 prrx1b (ENSDLAG00005026578) ENSDLAG00005030898 ##22 ENSDLAG00005007220 ##22 MAST2 (ENSDLAG00005007444) PIK3R3 (ENSDLAG00005009702) TSPAN1 (ENSDLAG00005010091) pomgnt1 (ENSDLAG00005010107) ENSDLAG00005010180 ENSDLAG00005031434 ENSDLAG00005010194 ENSDLAG00005010201 RHPN1 (ENSDLAG00005010260) ENSDLAG00005010285 mafaa (ENSDLAG00005030978) ZC3H3 (ENSDLAG00005010316) ENSDLAG00005010349 ENSDLAG00005034029 ENSDLAG00005010453 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 570 ENSLBEG00000020184 ENSLBEG00000020193 ##22 ENSLBEG00000020205 ##22 MAST2 (ENSLBEG00000020231) Ballan wrasse MODERN SPECIES 570 ENSLBEG00000020184 ENSLBEG00000020193 ##22 ENSLBEG00000020205 ##22 MAST2 (ENSLBEG00000020231) Clupeocephala ANCESTRAL SPECIES 126 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.a ENSGT00940000157064.a.b.a ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00990000204320 Euteleosteomorpha ANCESTRAL SPECIES 64 ENSGT00410000025695.a ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00990000204320 ENSGT01020000230600 ENSGT00940000159706 ENSGT00940000154694 Protacanthopterygii ANCESTRAL SPECIES 43 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000163253.b.c.a.b ENSGT01030000234567.B.a.a.b.b.a.a ENSGT00940000165622.i.a ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g.c ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00990000204320 ENSGT00940000159706 ENSGT00940000154694 Salmoninae ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d ##22 Huchen MODERN SPECIES 1493 ENSHHUG00000036679 ##22 ENSHHUG00000036747 ENSHHUG00000036758 eeig2a (ENSHHUG00000036770) prpf38b (ENSHHUG00000036778) ENSHHUG00000036791 ENSHHUG00000036798 ENSHHUG00000036801 FNDC7 (ENSHHUG00000036804) ENSHHUG00000036811 ENSHHUG00000036813 WDR47 (ENSHHUG00000036865) ENSHHUG00000036870 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 Cod MODERN SPECIES 10 ST8SIA5 (ENSGMOG00000017008) rpl37 (ENSGMOG00000016997) ENSGMOG00000016986 ENSGMOG00000027855 ENSGMOG00000015325 ENSGMOG00000035073 ENSGMOG00000016912 ENSGMOG00000016873 ENSGMOG00000022832 ENSGMOG00000016593 #18 ENSGMOG00000029706 ENSGMOG00000016735 ENSGMOG00000025145 #19 ENSGMOG00000034109 cdk5rap2 (ENSGMOG00000016387) ##22 ENSGMOG00000022660 ##22 ENSGMOG00000027526 NUP188 (ENSGMOG00000016308) ENSGMOG00000035306 dolk (ENSGMOG00000020327) phyhd1 (ENSGMOG00000016285) lrrc8aa (ENSGMOG00000016278) uck1 (ENSGMOG00000016253) rapgef1b (ENSGMOG00000016178) ENSGMOG00000016162 dolpp1 (ENSGMOG00000016141) miga2 (ENSGMOG00000016113) st6galnac4 (ENSGMOG00000016107) ENSGMOG00000016091 spout1 (ENSGMOG00000015985) kyat1 (ENSGMOG00000015967) Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT01100000263594.a ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 ENSGT00940000159706 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.B ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d ##22 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d ##22 Carangaria ANCESTRAL SPECIES 1 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00980000198705 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384 ENSGT01030000234768.a.b ENSGT01030000234768.a.a ENSGT00940000164898.d ENSGT00940000154065.b ENSGT00940000154497.A ENSGT00390000018560.a.a.b ENSGT00940000161007 ENSGT00390000018560.a.a.a.a.a ENSGT00940000177788 ENSGT01020000230346.D Carangaria_A ANCESTRAL SPECIES 27 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00980000198705 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384 ENSGT01030000234768.a.b ENSGT01030000234768.a.a ENSGT00940000164898.d ENSGT00940000178180 ENSGT00940000177379 ENSGT00940000178323 ENSGT01020000230697 ENSGT00940000154065.b ENSGT00940000154497.A ENSGT00390000018560.a.a.b Seriola ANCESTRAL SPECIES 76 ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00940000181495 ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384 ENSGT01030000234768.a.b.c Yellowtail amberjack MODERN SPECIES 2757 gpatch4 (ENSSLDG00000012365) ENSSLDG00000012383 tspan13a (ENSSLDG00000012407) bag6 (ENSSLDG00000012455) ENSSLDG00000012553 glrx3 (ENSSLDG00000012568) ENSSLDG00000012579 ENSSLDG00000012591 tnfb (ENSSLDG00000012604) GABBR1 (ENSSLDG00000012634) sh3bp5la (ENSSLDG00000012689) mgat1a (ENSSLDG00000012708) rnf183 (ENSSLDG00000012722) dhx16 (ENSSLDG00000012742) ppt2a.2 (ENSSLDG00000012786) ENSSLDG00000012818 ##22 ENSSLDG00000012835 ENSSLDG00000012849 fli1rs (ENSSLDG00000012862) etsrp (ENSSLDG00000012889) ENSSLDG00000012922 ENSSLDG00000012937 Greater amberjack MODERN SPECIES 44 rpz4 (ENSSDUG00000006166) rpz5 (ENSSDUG00000006159) rpz6 (ENSSDUG00000006147) rpz (ENSSDUG00000006138) ENSSDUG00000006124 ENSSDUG00000006116 nr2f5 (ENSSDUG00000006112) bola1 (ENSSDUG00000006099) bola1 (ENSSDUG00000006093) SV2A (ENSSDUG00000006062) rsad2 (ENSSDUG00000006029) ENSSDUG00000006022 mtmr11 (ENSSDUG00000005986) otud7b (ENSSDUG00000005932) rbm8a (ENSSDUG00000005911) ENSSDUG00000005882 ##22 ENSSDUG00000005867 ENSSDUG00000005860 zp3d.2 (ENSSDUG00000005845) fli1rs (ENSSDUG00000005810) etsrp (ENSSDUG00000005786) ENSSDUG00000005777 Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000165622 ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b.f ENSGT00390000012913.a.a ENSGT01100000263594.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00940000177606 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000169454 ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.A ENSGT00980000198596.B ENSGT00980000198596.C ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 Atherinomorphae ANCESTRAL SPECIES ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00980000198705 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384 ENSGT00940000164898.d.b ENSGT00940000177605 ENSGT00940000178180 ENSGT00940000154065.b ENSGT00940000154497.A ENSGT00390000018560.a.a.b ENSGT00940000161007 ENSGT00390000018560.a.a.a.a.a ENSGT01020000230346.D ENSGT00940000164072 Oryzias ANCESTRAL SPECIES 2 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000167246.b ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00940000155779.b.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384 ENSGT00530000063023.B ENSGT00440000034270.a.b ENSGT00390000011734 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00940000154412.B.a.b ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 Oryzias_a ANCESTRAL SPECIES 297 ENSGT00940000155779.b.a ENSGT00950000183190.a.a.b.d ##22 Japanese Medaka HdrR MODERN SPECIES 7 ENSORLG00000016040 ENSORLG00000030356 tnfb (ENSORLG00000016035) ENSORLG00000022264 ENSORLG00000016024 sh3bp5la (ENSORLG00000015993) mgat1a (ENSORLG00000015989) rnf183 (ENSORLG00000029845) dhx16 (ENSORLG00000015982) ppt2a.2 (ENSORLG00000015959) ENSORLG00000024124 ENSORLG00000022507 ENSORLG00000025297 ENSORLG00000029591 ENSORLG00000030371 ENSORLG00000030239 ##22 ENSORLG00000026300 ENSORLG00000028753 ENSORLG00000023678 ENSORLG00000015945 fli1rs (ENSORLG00000015940) dpy19l1l (ENSORLG00000015912) ENSORLG00000015887 CSPG5 (ENSORLG00000015869) elp6 (ENSORLG00000015865) SCAP (ENSORLG00000015864) ptpn23a (ENSORLG00000015852) ENSORLG00000023504 sema6e (ENSORLG00000015839) ENSORLG00000026527 ENSORLG00000022997 Oryzias_b ANCESTRAL SPECIES 1 ENSGT00940000167246.b ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00940000155779.b.a.a.b ENSGT00940000155779.b.a.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384 ENSGT00530000063023.B ENSGT00440000034270.a.b ENSGT00390000011734 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00940000154412.B.a.b ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 Indian medaka MODERN SPECIES 33 tspan13a (ENSOMEG00000019862) bag6 (ENSOMEG00000019836) glrx3 (ENSOMEG00000019791) ENSOMEG00000019776 ENSOMEG00000019740 ENSOMEG00000019713 tnfb (ENSOMEG00000019631) sh3bp5la (ENSOMEG00000019617) mgat1a (ENSOMEG00000019586) rnf183 (ENSOMEG00000019573) dhx16 (ENSOMEG00000019560) ppt2a.2 (ENSOMEG00000019502) ENSOMEG00000019486 ENSOMEG00000019387 ENSOMEG00000019109 ENSOMEG00000019088 ##22 ENSOMEG00000019060 ENSOMEG00000019038 zp3d.2 (ENSOMEG00000019006) fli1rs (ENSOMEG00000018957) etsrp (ENSOMEG00000000897) dpy19l1l (ENSOMEG00000018867) ENSOMEG00000000487 CSPG5 (ENSOMEG00000018705) elp6 (ENSOMEG00000018634) SCAP (ENSOMEG00000018600) ENSOMEG00000018522 ptpn23a (ENSOMEG00000018504) mettl6 (ENSOMEG00000018462) eaf1 (ENSOMEG00000018444) bmper (ENSOMEG00000018426) Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d ##22 NAME_4 ANCESTRAL SPECIES 210 ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a.j ENSGT00980000198705 ENSGT00940000169011 ENSGT00950000183190.a.a.b.d ##22 ENSGT00390000002843.a ENSGT00940000165943 ENSGT00940000166384 ENSGT00940000164898.d.a.a Sheepshead minnow MODERN SPECIES 840 rnf183 (ENSCVAG00000006965) dhx16 (ENSCVAG00000007009) ppt2a.2 (ENSCVAG00000007016) ENSCVAG00000000195 ##22 ENSCVAG00000000617 fli1rs (ENSCVAG00000007086) etsrp (ENSCVAG00000007125) ENSCVAG00000007171 ENSCVAG00000007180 ENSCVAG00000007187 ENSCVAG00000007205 ENSCVAG00000007217 ENSCVAG00000007226 ezh2 (ENSCVAG00000007300) cul1a (ENSCVAG00000007360) ENSCVAG00000007366 ENSCVAG00000007409 cldn11b (ENSCVAG00000007411) ENSCVAG00000007428 Poeciliinae ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d ##22 Platyfish MODERN SPECIES 17 ENSXMAG00000023126 ENSXMAG00000024418 tspan13a (ENSXMAG00000013380) bag6 (ENSXMAG00000013377) glrx3 (ENSXMAG00000019534) ENSXMAG00000013375 ENSXMAG00000026917 tnfb (ENSXMAG00000013364) GABBR1 (ENSXMAG00000013315) ENSXMAG00000025853 sh3bp5la (ENSXMAG00000013312) mgat1a (ENSXMAG00000013310) rnf183 (ENSXMAG00000021926) dhx16 (ENSXMAG00000013293) ppt2a.1 (ENSXMAG00000024781) ENSXMAG00000013283 ##22 ENSXMAG00000023937 zp3d.2 (ENSXMAG00000020967) fli1rs (ENSXMAG00000017105) etsrp (ENSXMAG00000017104) ENSXMAG00000020980 pycard (ENSXMAG00000013282) ENSXMAG00000013280 ENSXMAG00000026793 ENSXMAG00000021694 ENSXMAG00000028600 dnajc28 (ENSXMAG00000013277) ENSXMAG00000024277 si:ch211-225p5.8 (ENSXMAG00000026673) ENSXMAG00000028116 scn1ba (ENSXMAG00000013261) Aplocheiloidei ANCESTRAL SPECIES 493 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 Mangrove rivulus MODERN SPECIES 498 GABBR1 (ENSKMAG00000009103) ENSKMAG00000009162 sh3bp5la (ENSKMAG00000009174) mgat1a (ENSKMAG00000009186) rnf183 (ENSKMAG00000009208) dhx16 (ENSKMAG00000009246) ppt2a.2 (ENSKMAG00000009344) ENSKMAG00000009366 ##22 ENSKMAG00000009401 zp3d.2 (ENSKMAG00000009424) fli1rs (ENSKMAG00000009451) etsrp (ENSKMAG00000009482) ENSKMAG00000009493 ENSKMAG00000009508 Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00980000198705 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384 ENSGT00940000164898.d ENSGT00940000177379 ENSGT00940000154065.b ENSGT00940000154497.A ENSGT00390000018560.a.a.b ENSGT00940000161007 ENSGT00390000018560.a.a.a.a.a ENSGT00940000177788 ENSGT01020000230346.D Cichlidae ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d ##22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d ##22 Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT01100000264191 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384 ENSGT01030000234768.a.a.a ENSGT00940000164898.d ENSGT00940000176861.b.a ENSGT01100000263761 ENSGT00940000154065.b ENSGT00940000154497.A ENSGT00390000018560.a.a.b ENSGT00940000161007 ENSGT00390000018560.a.a.a.a.a ENSGT00940000177788 Haplochromini ANCESTRAL SPECIES 6 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT01100000264191 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384.e ENSGT01030000234768.a.a.a ENSGT00940000164898.d ENSGT00940000166384.f ENSGT00940000176861.b.a ENSGT01100000263761 ENSGT00940000154065.b ENSGT00940000154497.A ENSGT00390000018560.a.a.b ENSGT00940000161007 ENSGT00390000018560.a.a.a.a.a Burton s mouthbrooder MODERN SPECIES 327 gpatch4 (ENSHBUG00000009675) ENSHBUG00000009684 ENSHBUG00000009694 tspan13a (ENSHBUG00000009721) bag6 (ENSHBUG00000009738) ENSHBUG00000009753 ENSHBUG00000009763 tnfb (ENSHBUG00000009771) GABBR1 (ENSHBUG00000009828) ENSHBUG00000009836 sh3bp5la (ENSHBUG00000009874) mgat1a (ENSHBUG00000009888) rnf183 (ENSHBUG00000009899) dhx16 (ENSHBUG00000009952) ppt2a.2 (ENSHBUG00000000750) ENSHBUG00000009984 ##22 ENSHBUG00000009994 zp3d.2 (ENSHBUG00000010003) fli1rs (ENSHBUG00000010018) etsrp (ENSHBUG00000010028) ENSHBUG00000010041 pycard (ENSHBUG00000010055) ENSHBUG00000010071 Haplochromini_A ANCESTRAL SPECIES 27 ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT01100000264191 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00980000198705 ENSGT00940000169011 ENSGT00390000002843.a ENSGT01030000234567.A.a.a.a.a.b.e.b ENSGT00940000165943 ENSGT00940000166384.f ENSGT00940000164898.d ENSGT01030000234768.a.a.a Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d ##22 Eastern happy MODERN SPECIES 2 gpatch4 (ENSACLG00000010456) ENSACLG00000010509 ENSACLG00000010519 tspan13a (ENSACLG00000010530) bag6 (ENSACLG00000010554) glrx3 (ENSACLG00000010585) ENSACLG00000010600 ENSACLG00000010614 tnfb (ENSACLG00000010621) GABBR1 (ENSACLG00000010781) sh3bp5la (ENSACLG00000010869) mgat1a (ENSACLG00000010896) rnf183 (ENSACLG00000010912) dhx16 (ENSACLG00000010932) ppt2a.2 (ENSACLG00000011072) ENSACLG00000011088 ##22 ENSACLG00000011107 ENSACLG00000011133 zp3d.2 (ENSACLG00000011146) fli1rs (ENSACLG00000011166) etsrp (ENSACLG00000011212) ENSACLG00000011242 pycard (ENSACLG00000011248) ENSACLG00000011255 ENSACLG00000011258 ENSACLG00000011260 ENSACLG00000011263 ENSACLG00000011267 ENSACLG00000011536 ENSACLG00000011538 ENSACLG00000011570 P. nyererei MODERN SPECIES 588 ENSPNYG00000018351 gpatch4 (ENSPNYG00000018461) ENSPNYG00000018521 tspan13a (ENSPNYG00000018549) bag6 (ENSPNYG00000018572) glrx3 (ENSPNYG00000018588) ENSPNYG00000018609 ENSPNYG00000018635 tnfb (ENSPNYG00000018642) GABBR1 (ENSPNYG00000018663) sh3bp5la (ENSPNYG00000018707) mgat1a (ENSPNYG00000018728) rnf183 (ENSPNYG00000018739) dhx16 (ENSPNYG00000018755) ppt2a.1 (ENSPNYG00000018844) ENSPNYG00000019080 ##22 ENSPNYG00000019125 fli1rs (ENSPNYG00000019138) etsrp (ENSPNYG00000019162) ENSPNYG00000019181 Midas cichlid MODERN SPECIES 1257 ENSACIG00000021166 sytl1 (ENSACIG00000021196) rbm48 (ENSACIG00000021495) efcab1 (ENSACIG00000021546) pex1 (ENSACIG00000021560) elmo1 (ENSACIG00000021643) rp9 (ENSACIG00000021679) poc1bl (ENSACIG00000021700) GALNT12 (ENSACIG00000021730) GABBR1 (ENSACIG00000021766) sh3bp5la (ENSACIG00000021795) mgat1a (ENSACIG00000021809) rnf183 (ENSACIG00000021816) dhx16 (ENSACIG00000021825) ppt2a.2 (ENSACIG00000021868) ENSACIG00000021923 ##22 ENSACIG00000021944 ENSACIG00000021957 zp3d.2 (ENSACIG00000021967) fli1rs (ENSACIG00000021979) etsrp (ENSACIG00000021993) ENSACIG00000022002 pycard (ENSACIG00000022007) iqgap3 (ENSACIG00000022016) Pomacentridae ANCESTRAL SPECIES 25 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000167095.B ENSGT00510000049239.b.b ENSGT00940000165753 ENSGT00510000048165 ENSGT00950000182940.b.a.b.a.a ENSGT00650000094861 ENSGT00940000160276 ENSGT00940000159172 ENSGT00730000111185.eb ENSGT00760000119652 ENSGT00940000159412 ENSGT00940000160567 ENSGT00940000154566 ENSGT00940000158438.n ENSGT00950000183180.a.b ##17 Bicolor damselfish MODERN SPECIES 458 ENSSPAG00000012726 tspan13a (ENSSPAG00000012698) bag6 (ENSSPAG00000012678) glrx3 (ENSSPAG00000012656) ENSSPAG00000012646 ENSSPAG00000012635 tnfb (ENSSPAG00000012619) ENSSPAG00000012594 ENSSPAG00000012571 sh3bp5la (ENSSPAG00000012567) mgat1a (ENSSPAG00000012552) rnf183 (ENSSPAG00000012532) dhx16 (ENSSPAG00000012416) ppt2a.2 (ENSSPAG00000012385) ENSSPAG00000012362 ##22 ENSSPAG00000012342 nr2f5 (ENSSPAG00000012324) bola1 (ENSSPAG00000012313) SV2A (ENSSPAG00000012284) ENSSPAG00000012272 mtmr11 (ENSSPAG00000012227) otud7b (ENSSPAG00000012196) rbm8a (ENSSPAG00000012181) afp4 (ENSSPAG00000012172) ENSSPAG00000012164 ntrk1 (ENSSPAG00000012074) Pomacentridae_A ANCESTRAL SPECIES 5 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a.l ENSGT00940000155779.a.a.k ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g ENSGT00940000169454 ENSGT00390000004674.j ENSGT00980000198596.A ENSGT00390000004674.i.a ENSGT00940000178918 ENSGT00940000177587 ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00940000163706 ENSGT00940000172979 ENSGT01020000230600 Amphiprion ANCESTRAL SPECIES 1 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00930000152259 ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a.l ENSGT00940000155779.a.a.k ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000167095.B ENSGT00510000049239.b.b ENSGT00940000165753 ENSGT00510000048165 ENSGT00950000182940.b.a.b.a.a ENSGT00650000094861 ENSGT00940000160276 ENSGT00940000159172 ENSGT00730000111185.eb ENSGT00760000119652 ENSGT00940000159412 ENSGT00940000160567 ENSGT00940000154566 ENSGT00940000158438.n ENSGT00950000183180.a.b ##17 Orange clownfish MODERN SPECIES 21 tspan13a (ENSAPEG00000022280) bag6 (ENSAPEG00000022296) glrx3 (ENSAPEG00000022313) ENSAPEG00000022323 ENSAPEG00000022341 ENSAPEG00000022349 tnfb (ENSAPEG00000022358) GABBR1 (ENSAPEG00000022372) ENSAPEG00000022418 sh3bp5la (ENSAPEG00000022428) mgat1a (ENSAPEG00000022450) rnf183 (ENSAPEG00000022495) dhx16 (ENSAPEG00000022508) ENSAPEG00000022546 ENSAPEG00000022563 ENSAPEG00000022575 ##22 ENSAPEG00000022594 ENSAPEG00000022616 nr2f5 (ENSAPEG00000022639) bola1 (ENSAPEG00000022655) SV2A (ENSAPEG00000022757) ENSAPEG00000022792 mtmr11 (ENSAPEG00000022797) otud7b (ENSAPEG00000022828) rbm8a (ENSAPEG00000022847) afp4 (ENSAPEG00000022859) ntrk1 (ENSAPEG00000022877) PAQR6 (ENSAPEG00000022918) smg5 (ENSAPEG00000022949) SYNGAP1 (ENSAPEG00000023032) PHF1 (ENSAPEG00000023049) ##17 Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 763 tm6sf2a (ENSAOCG00000013225) ENSAOCG00000013117 ENSAOCG00000000824 ENSAOCG00000013067 ##22 ENSAOCG00000012840 ##22 ENSAOCG00000012811 PRKAB2 (ENSAOCG00000002014) ENSAOCG00000012764 eeig2a (ENSAOCG00000012718) prpf38b (ENSAOCG00000012675) ENSAOCG00000012660 FNDC7 (ENSAOCG00000002076) ENSAOCG00000012591 ENSAOCG00000012566 WDR47 (ENSAOCG00000012475) CAMSAP2 (ENSAOCG00000012397) ENSAOCG00000012316 ENSAOCG00000012285 ENSAOCG00000012268 CAPN10 (ENSAOCG00000000749) Clown anemonefish MODERN SPECIES 1794 bag6 (ENSAOCG00000024008) glrx3 (ENSAOCG00000024017) ENSAOCG00000024023 ENSAOCG00000024032 ENSAOCG00000001758 tnfb (ENSAOCG00000024044) GABBR1 (ENSAOCG00000024113) sh3bp5la (ENSAOCG00000024157) mgat1a (ENSAOCG00000002181) rnf183 (ENSAOCG00000024174) dhx16 (ENSAOCG00000024217) ENSAOCG00000024233 ENSAOCG00000024248 ENSAOCG00000024255 ##22 ENSAOCG00000024262 ENSAOCG00000001765 Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 298 stk11 (ENSAPOG00000004402) ENSAPOG00000004420 ENSAPOG00000004429 cirbpa (ENSAPOG00000004458) NDUFA13 (ENSAPOG00000004491) GATAD2A (ENSAPOG00000004524) MAU2 (ENSAPOG00000004632) ARMC6 (ENSAPOG00000004711) SLC25A42 (ENSAPOG00000004755) ENSAPOG00000004816 tm6sf2a (ENSAPOG00000004835) ENSAPOG00000004854 ENSAPOG00000004871 ENSAPOG00000005032 ##22 ENSAPOG00000005080 ENSAPOG00000005111 ##22 PRKAB2 (ENSAPOG00000005152) ENSAPOG00000001042 EEIG2 (ENSAPOG00000005269) prpf38b (ENSAPOG00000005297) Spiny chromis MODERN SPECIES 86 ENSAPOG00000009275 ENSAPOG00000009331 ##22 ENSAPOG00000009350 nr2f5 (ENSAPOG00000009372) bola1 (ENSAPOG00000000262) SV2A (ENSAPOG00000009474) ENSAPOG00000009490 mtmr11 (ENSAPOG00000009570) otud7b (ENSAPOG00000009679) rbm8a (ENSAPOG00000009727) afp4 (ENSAPOG00000009768) ntrk1 (ENSAPOG00000009792) CLEC18A (ENSAPOG00000009846) ENSAPOG00000009882 ENSAPOG00000009908 fkbp6 (ENSAPOG00000009934) ENSAPOG00000009952 Otomorpha ANCESTRAL SPECIES 140 ENSGT00390000006412 ENSGT01100000266855 ENSGT00390000014900.b.a ENSGT00940000165642 ENSGT00390000016820.d ENSGT00940000157010.m ENSGT00980000199373 ENSGT00390000016199.a ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT00550000074977 ENSGT00510000049347.g ENSGT00390000003781.e.a ENSGT00390000013846.a.b Otophysi ANCESTRAL SPECIES 128 ENSGT01100000266855 ENSGT00390000014900.b.a ENSGT00940000165642 ENSGT00390000016820.d ENSGT00940000157010.m ENSGT00980000199373 ENSGT00390000016199.a ENSGT00990000205233 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT00550000074977 ENSGT00940000154477.jc.a ENSGT00940000156324.f.a ENSGT00940000154477.kc ENSGT00940000155457.b ENSGT00940000165744 ENSGT00390000000214.a.a.e ENSGT00940000155158.q.a ENSGT00940000160721 Characiphysae ANCESTRAL SPECIES 70 ENSGT00390000002748 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000016319 ENSGT00940000175067 ENSGT00940000163756.c.b ENSGT00990000205248 ENSGT00990000205233 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT00550000074977 ENSGT00940000154477.jc.a ENSGT00940000156324.f.a ENSGT00940000155457.b ENSGT00940000165744 ENSGT00390000000214.a.a.e ENSGT00940000155158.q.a ENSGT00940000160721 ENSGT00390000009030 ENSGT00940000159752 ENSGT00390000002625 ENSGT00940000158363 ENSGT00940000166439 Channel catfish MODERN SPECIES 8 ctrl (ENSIPUG00000000820) lin37 (ENSIPUG00000000827) proser3 (ENSIPUG00000000872) CRYAA (ENSIPUG00000000887) ENSIPUG00000000900 ENSIPUG00000000907 APOM (ENSIPUG00000000916) ENSIPUG00000000925 tnfb (ENSIPUG00000000977) GABBR1 (ENSIPUG00000000932) sh3bp5la (ENSIPUG00000000987) mgat1a (ENSIPUG00000001000) rnf183 (ENSIPUG00000001015) DHX16 (ENSIPUG00000001025) ppt2a.1 (ENSIPUG00000001050) ENSIPUG00000001057 ##22 ccdc105 (ENSIPUG00000001073) fam129a (ENSIPUG00000001092) rnf2 (ENSIPUG00000001108) arpc5a (ENSIPUG00000001126) pla2g4a (ENSIPUG00000001147) ptgs2a (ENSIPUG00000001192) pdca (ENSIPUG00000001218) c17h1orf27 (ENSIPUG00000001230) TPR (ENSIPUG00000001242) prg4a (ENSIPUG00000001354) ENSIPUG00000001377 dusp12 (ENSIPUG00000001438) ENSIPUG00000001454 ENSIPUG00000001467 nyap2 (ENSIPUG00000001476) Characiphysae_b ANCESTRAL SPECIES 81 ENSGT01020000230438.D.a ENSGT00390000002748 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000016319 ENSGT00940000163756.c.b ENSGT00990000205248 ENSGT00990000205233 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT00550000074977 ENSGT00940000154477.jc.a ENSGT00940000156324.f.a ENSGT00940000155457.b ENSGT00940000165744 ENSGT00390000000214.a.a.e ENSGT00940000155158.q.a ENSGT00940000160721 ENSGT00390000009030 ENSGT00940000159752 ENSGT00390000002625 ENSGT00940000158363 ENSGT00940000166439 Electric eel MODERN SPECIES 499 hspb6 (ENSEEEG00000019615) psenen (ENSEEEG00000019617) ENSEEEG00000019627 ENSEEEG00000019628 ENSEEEG00000019630 ENSEEEG00000019631 lta (ENSEEEG00000019632) tnfb (ENSEEEG00000019634) GABBR1 (ENSEEEG00000019641) sh3bp5la (ENSEEEG00000019665) mgat1a (ENSEEEG00000019668) rnf183 (ENSEEEG00000019669) dhx16 (ENSEEEG00000019705) ENSEEEG00000020181 ppt2a.1 (ENSEEEG00000020183) ENSEEEG00000020195 ##22 ENSEEEG00000020198 inpp5ka (ENSEEEG00000020203) tekt1 (ENSEEEG00000020291) FBXO39 (ENSEEEG00000020295) xaf1 (ENSEEEG00000020292) rap1gap2a (ENSEEEG00000020296) ENSEEEG00000020298 tsku (ENSEEEG00000020299) Characoidei ANCESTRAL SPECIES 75 ENSGT00990000205248 ENSGT00990000205233 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00390000002843.a ENSGT00550000074977 ENSGT00940000154477.jc.a ENSGT00940000156324.f.a ENSGT00940000165744 ENSGT00390000000214.a.a.e ENSGT00940000155158.q.a.g ENSGT00940000160721 ENSGT00390000009030 ENSGT00940000159752.n ENSGT00940000159752.m ENSGT00390000002625 ENSGT00940000158363 ENSGT00940000166439 Red-bellied piranha MODERN SPECIES 126 ENSPNAG00000018279 lta (ENSPNAG00000018264) ENSPNAG00000018252 GABBR1 (ENSPNAG00000018238) sh3bp5la (ENSPNAG00000018161) mgat1a (ENSPNAG00000018099) rnf183 (ENSPNAG00000018083) dhx16 (ENSPNAG00000018065) ppt2a.1 (ENSPNAG00000017993) ENSPNAG00000017887 ##22 ENSPNAG00000017879 ENSPNAG00000017869 MSH5 (ENSPNAG00000017859) opn1mw4 (ENSPNAG00000017727) ROBO1 (ENSPNAG00000016376) robo2 (ENSPNAG00000016285) ENSPNAG00000016041 ENSPNAG00000016026 ENSPNAG00000015975 stim1a (ENSPNAG00000015878) rhoga (ENSPNAG00000015827) CHRNA10 (ENSPNAG00000015806) mrps23 (ENSPNAG00000015802) NOS2 (ENSPNAG00000015774) NOS2 (ENSPNAG00000015647) Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 18 si:ch211-191a24.4 (ENSAMXG00000035418) mcm3l (ENSAMXG00000032018) mep1ba (ENSAMXG00000009554) ENSAMXG00000036278 ENSAMXG00000037574 PALLD (ENSAMXG00000009581) cbr4 (ENSAMXG00000036711) TRMT1L (ENSAMXG00000009602) niban1a (ENSAMXG00000009608) kifap3a (ENSAMXG00000009625) ntmt2 (ENSAMXG00000009655) gorab (ENSAMXG00000035192) PRRX1 (ENSAMXG00000032983) ENSAMXG00000036779 ENSAMXG00000042731 ##22 ENSAMXG00000043606 ##22 slc25a24 (ENSAMXG00000009717) elp3 (ENSAMXG00000009723) si:ch211-63o20.7 (ENSAMXG00000009746) pnocb (ENSAMXG00000042920) znf395b (ENSAMXG00000009775) paqr8 (ENSAMXG00000025525) mcm3 (ENSAMXG00000009797) il17a/f3 (ENSAMXG00000039772) stmn4 (ENSAMXG00000041709) cdc42bpb (ENSAMXG00000019172) vipas39 (ENSAMXG00000019164) ENSAMXG00000026157 runx2b (ENSAMXG00000035698) opn8a (ENSAMXG00000030048) opn8b (ENSAMXG00000032634) Mexicana tetra MODERN SPECIES ENSAMXG00000000419 ENSAMXG00000040443 hccsa.1 (ENSAMXG00000000407) RWDD3 (ENSAMXG00000000400) ptbp2b (ENSAMXG00000000378) ENSAMXG00000039629 ENSAMXG00000037203 GABBR1 (ENSAMXG00000005133) tnfb (ENSAMXG00000005117) sh3bp5la (ENSAMXG00000033132) mgat1a (ENSAMXG00000043888) rnf183 (ENSAMXG00000026003) ENSAMXG00000037090 dhx16 (ENSAMXG00000005181) ppt2a.1 (ENSAMXG00000034281) ENSAMXG00000005245 ##22 ENSAMXG00000039714 ROBO1 (ENSAMXG00000012031) ENSAMXG00000037750 robo2 (ENSAMXG00000011947) ENSAMXG00000011913 ENSAMXG00000011890 stim1a (ENSAMXG00000038559) RHOG (ENSAMXG00000035561) ENSAMXG00000043739 RHOG (ENSAMXG00000042404) RHOG (ENSAMXG00000034111) rhoga (ENSAMXG00000030572) ENSAMXG00000033028 ENSAMXG00000041100 rhoga (ENSAMXG00000036246) Cyprinoidei ANCESTRAL SPECIES 4 ENSGT00390000006412 ENSGT00390000014900.b.a ENSGT00940000165642 ENSGT00390000016820.d ENSGT00940000157010.m ENSGT00980000199373 ENSGT00390000016199.a ENSGT00990000205233 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b ENSGT00940000166999.B ENSGT00940000158480 ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000169011 ENSGT00950000183168.D ENSGT00390000008756 ENSGT00950000183022.a.a.a ENSGT00940000155511.n.a ENSGT00390000016956 ENSGT00390000009776.o ENSGT00940000156971.A ENSGT00940000157208 ENSGT00940000174694 ENSGT00890000139453.b.e.b ENSGT00940000161579.c ENSGT00390000010744.m ENSGT00940000153991.a.b.b ENSGT00940000166749 Zebrafish MODERN SPECIES 6 crppa (ENSDARG00000005034) sostdc1a (ENSDARG00000068892) ankmy2a (ENSDARG00000005948) tspan13a (ENSDARG00000068883) bag6 (ENSDARG00000075892) lta (ENSDARG00000020483) tnfb (ENSDARG00000013598) GABBR1 (ENSDARG00000018967) sh3bp5la (ENSDARG00000019160) mgat1a (ENSDARG00000012407) ENSDARG00000097289 rnf183 (ENSDARG00000068851) dhx16 (ENSDARG00000013150) ENSDARG00000068846 ppt2a.1 (ENSDARG00000068840) ENSDARG00000087596 ##22 ppt2a.2 (ENSDARG00000010782) ENSDARG00000054136 ENSDARG00000091607 bloc1s3 (ENSDARG00000068828) ppt2a.3 (ENSDARG00000014208) sesn3 (ENSDARG00000015822) ENSDARG00000097344 ppt2a.4 (ENSDARG00000093176) ENSDARG00000097997 ENSDARG00000006447 agfg1a (ENSDARG00000030020) mrpl44 (ENSDARG00000094277) mffa (ENSDARG00000053753) megf6 (ENSDARG00000005216) MECOM (ENSDARG00000060808) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 14 ENSGT00940000159770.c ENSGT00440000033807.b ENSGT00940000154018.b.b.c ENSGT00390000006412.f ENSGT00390000014900.b.a.f ENSGT00390000016820.d.b ENSGT00940000157010.m.c ENSGT00390000016199.a.a ENSGT00990000205233.a ENSGT01060000248544.a.b.b.a.a ENSGT00940000157642.g.a ENSGT00390000018500.a.d.a.a ENSGT00530000063632.B.b.a ENSGT00940000166999.B.b ENSGT00940000158480.a ENSGT00950000183190.a.a.b.d.g.a ##22 ENSGT00940000169011.a ENSGT00950000183168.D.e ENSGT00390000008756.d ENSGT00950000183022.a.a.a.g.b ENSGT00940000155511.n.a.d ENSGT00390000016956.g ENSGT00390000009776.o.b ENSGT00940000157208.g ENSGT00890000139453.b.e.b.d ENSGT00940000161579.c.b ENSGT00390000010744.m.b ENSGT00510000047914.a.a.i.g ENSGT00510000047914.b.b ENSGT00950000183084.b.b.m ENSGT00390000001750.d Goldfish DUPLICATION Goldfish MODERN SPECIES 34 tmem106ba (ENSCARG00000065226) arl4aa (ENSCARG00000065233) etv1 (ENSCARG00000065257) agmo (ENSCARG00000065542) MEOX2 (ENSCARG00000065579) ankmy2a (ENSCARG00000065596) tspan13a (ENSCARG00000065801) ENSCARG00000065808 bag6 (ENSCARG00000065820) lta (ENSCARG00000065889) tnfb (ENSCARG00000065895) GABBR1 (ENSCARG00000065945) sh3bp5la (ENSCARG00000066731) mgat1a (ENSCARG00000066736) rnf183 (ENSCARG00000066747) ENSCARG00000066754 ##22 ENSCARG00000066767 sesn3 (ENSCARG00000066815) ENSCARG00000066935 SLC19A3 (ENSCARG00000066937) agfg1a (ENSCARG00000066947) mrpl44 (ENSCARG00000066967) mffa (ENSCARG00000066981) MECOM (ENSCARG00000067066) NYAP2 (ENSCARG00000067361) ENSCARG00000067463 zgc:171927 (ENSCARG00000067465) or71at1 (ENSCARG00000067471) or71as2 (ENSCARG00000067475) or71ar1 (ENSCARG00000067479) or71ar1 (ENSCARG00000067484) Goldfish MODERN SPECIES 2631 sh3bp5la (ENSCARG00000042818) mgat1a (ENSCARG00000042816) rnf183 (ENSCARG00000042814) ENSCARG00000042797 ##22 ENSCARG00000042774 sesn3 (ENSCARG00000042734) ENSCARG00000042728 ENSCARG00000042720 Cyprininae_a ANCESTRAL SPECIES 41 ENSGT00940000154018.b.b.c ENSGT00390000006412.f ENSGT00390000014900.b.a.f ENSGT00390000016820.d.a ENSGT00940000157010.m.c ENSGT00980000199373 ENSGT00390000016199.a.a ENSGT00990000205233.a ENSGT01060000248544.a.b.b.a.a ENSGT00940000157642.g.a ENSGT00390000018500.a.d.a.a ENSGT00390000018500.a.d.b ENSGT00530000063632.B.b.a ENSGT00940000166999.B.b ENSGT00940000158480.a ENSGT00950000183190.a.a.b.d.g.a ##22 ENSGT00940000169011.a ENSGT00950000183168.D.e ENSGT00390000008756.d ENSGT00950000183022.a.a.a.g.b ENSGT00940000155511.n.a.d ENSGT00390000016956.g ENSGT00390000009776.o.b ENSGT00940000157208.g ENSGT00890000139453.b.e.b.d ENSGT00940000161579.c.b ENSGT00390000010744.m.b ENSGT00510000047914.a.a.i.g ENSGT00510000047914.b.b ENSGT00950000183084.b.b.m ENSGT00390000001750.d Common carp reference MODERN SPECIES 39 ENSCCRG00000037108 agmo (ENSCCRG00000059350) crppa (ENSCCRG00000050617) sostdc1a (ENSCCRG00000050611) ankmy2a (ENSCCRG00000004143) tspan13a (ENSCCRG00000050605) ENSCCRG00000050603 bag6 (ENSCCRG00000049051) lta (ENSCCRG00000054574) tnfb (ENSCCRG00000001526) ENSCCRG00000004105 sh3bp5la (ENSCCRG00000070853) rnf183 (ENSCCRG00000058996) dhx16 (ENSCCRG00000078521) ENSCCRG00000079917 ENSCCRG00000003813 ##22 ENSCCRG00000028703 ENSCCRG00000028708 ENSCCRG00000065518 ENSCCRG00000028717 agfg1a (ENSCCRG00000028758) mrpl44 (ENSCCRG00000070414) mffa (ENSCCRG00000057546) ENSCCRG00000004181 NYAP2 (ENSCCRG00000063933) ENSCCRG00000019871 rhbdd1 (ENSCCRG00000019865) ENSCCRG00000019862 sst1.1 (ENSCCRG00000074143) ENSCCRG00000019457 ostn (ENSCCRG00000019453) Cyprininae ANCESTRAL SPECIES 69 ENSGT00390000006412.e ENSGT00390000014900.b.a.e ENSGT00940000165642 ENSGT00390000016820.d.a ENSGT00940000157010.m.d ENSGT00980000199373 ENSGT00390000016199.a.b ENSGT00990000205233.b ENSGT01060000248544.a.b.b.a.b ENSGT00940000157642.g.b ENSGT00390000018500.a.d.a.b ENSGT00530000063632.B.b.b ENSGT00940000166999.B.a ENSGT00940000158480.b ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d.g.b ##22 ENSGT00940000169011.b ENSGT00950000183168.D.f ENSGT00390000008756.c ENSGT00950000183022.a.a.a.g.a ENSGT00940000155511.n.a.c ENSGT00390000016956.h ENSGT00390000009776.o.a ENSGT00940000156971.A ENSGT00940000157208.h ENSGT00940000174694 ENSGT00890000139453.b.e.b.c ENSGT00940000161579.c.a ENSGT00390000010744.m.a ENSGT00940000153991.a.b.b ENSGT00940000166749 Cyprininae_a ANCESTRAL SPECIES 38 ENSGT00440000033807.a ENSGT00940000154018.b.b.d ENSGT00390000006412.e ENSGT00390000014900.b.a.e ENSGT00390000016820.d.b ENSGT00940000157010.m.d ENSGT00390000016199.a.b ENSGT00990000205233.b ENSGT01060000248544.a.b.b.a.b ENSGT00940000157642.g.b ENSGT00390000018500.a.d.a.b ENSGT00530000063632.B.b.b ENSGT00940000166999.B.a ENSGT00940000158480.b ENSGT00940000155779.a.a ENSGT00950000183190.a.a.b.d.g.b ##22 ENSGT00940000169011.b ENSGT00950000183168.D.f ENSGT00390000008756.c ENSGT00950000183022.a.a.a.g.a ENSGT00940000155511.n.a.c ENSGT00390000016956.h ENSGT00390000009776.o.a ENSGT00940000156971.A ENSGT00940000157208.h ENSGT00940000174694 ENSGT00890000139453.b.e.b.c ENSGT00940000161579.c.a ENSGT00390000010744.m.a ENSGT00940000153991.a.b.b ENSGT00940000166749 Common carp reference MODERN SPECIES 26 MEOX2 (ENSCCRG00000058534) crppa (ENSCCRG00000004164) sostdc1a (ENSCCRG00000004161) ENSCCRG00000004151 tspan13a (ENSCCRG00000026285) ankmy2a (ENSCCRG00000063421) bag6 (ENSCCRG00000049032) lta (ENSCCRG00000001076) tnfb (ENSCCRG00000007334) ENSCCRG00000001542 sh3bp5la (ENSCCRG00000004107) mgat1a (ENSCCRG00000004113) rnf183 (ENSCCRG00000075642) dhx16 (ENSCCRG00000058939) ppt2a.1 (ENSCCRG00000009221) ENSCCRG00000009213 ##22 ENSCCRG00000009206 ENSCCRG00000065386 sesn3 (ENSCCRG00000009201) ENSCCRG00000078851 ENSCCRG00000009196 agfg1a (ENSCCRG00000009188) mrpl44 (ENSCCRG00000038029) mffa (ENSCCRG00000056679) megf6 (ENSCCRG00000061464) ENSCCRG00000004224 NYAP2 (ENSCCRG00000065426) IRS1 (ENSCCRG00000057643) rhbdd1 (ENSCCRG00000078073) COL4A4 (ENSCCRG00000058609) ENSCCRG00000057232 Goldfish MODERN SPECIES 6 sostdc1a (ENSCARG00000015873) ENSCARG00000015867 ankmy2a (ENSCARG00000015826) tspan13a (ENSCARG00000015816) ENSCARG00000015814 ENSCARG00000015811 bag6 (ENSCARG00000015791) lta (ENSCARG00000015781) tnfb (ENSCARG00000015779) GABBR1 (ENSCARG00000013209) sh3bp5la (ENSCARG00000013106) mgat1a (ENSCARG00000013100) rnf183 (ENSCARG00000013099) dhx16 (ENSCARG00000007535) ppt2a.1 (ENSCARG00000007223) ENSCARG00000007214 ##22 ENSCARG00000007205 sesn3 (ENSCARG00000007152) ENSCARG00000007141 SLC19A3 (ENSCARG00000007074) agfg1a (ENSCARG00000006948) mrpl44 (ENSCARG00000006922) mffa (ENSCARG00000006888) megf6 (ENSCARG00000006563) MECOM (ENSCARG00000005561) NYAP2 (ENSCARG00000005510) ENSCARG00000005503 IRS1 (ENSCARG00000005498) rhbdd1 (ENSCARG00000005490) ENSCARG00000005476 ENSCARG00000005414 Cyprininae ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d.h ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183190.a.a.b.d.h ##22 Golden-line barbel MODERN SPECIES 264 psmd5 (ENSSGRG00000019866) #18 ENSSGRG00000019988 st8sia5 (ENSSGRG00000019989) rpl37 (ENSSGRG00000019990) zgc:122979 (ENSSGRG00000019994) thbs4b (ENSSGRG00000020038) atp5fa1 (ENSSGRG00000022577) haus1 (ENSSGRG00000023222) zgc:77838 (ENSSGRG00000023223) RNF165 (ENSSGRG00000023224) B3GALT9 (ENSSGRG00000023225) #19 KCNT1 (ENSSGRG00000023227) notch1a (ENSSGRG00000023297) camsap1a (ENSSGRG00000025920) cdk5rap2 (ENSSGRG00000025936) ##22 ENSSGRG00000025937 ##22 dolk (ENSSGRG00000026028) phyhd1 (ENSSGRG00000026030) ENSSGRG00000026038 ENSSGRG00000026039 dnlz (ENSSGRG00000026042) uck1 (ENSSGRG00000026048) rapgef1b (ENSSGRG00000026145) NTNG2 (ENSSGRG00000026181) ENSSGRG00000026242 dolpp1 (ENSSGRG00000026244) miga2 (ENSSGRG00000026247) st6galnac4 (ENSSGRG00000026259) st6galnac4 (ENSSGRG00000026261) ST6GALNAC6 (ENSSGRG00000026262) spout1 (ENSSGRG00000026268) Goldfish MODERN SPECIES 13 tor1 (ENSCARG00000008729) nsa2 (ENSCARG00000008670) spout1 (ENSCARG00000008610) ST6GALNAC6 (ENSCARG00000008562) miga2 (ENSCARG00000008549) ENSCARG00000008533 COL5A1 (ENSCARG00000041897) uck1 (ENSCARG00000041870) dnlz (ENSCARG00000041820) lrrc8aa (ENSCARG00000041793) phyhd1 (ENSCARG00000041574) dolk (ENSCARG00000041556) ENSCARG00000041540 cdk9 (ENSCARG00000041466) cdk5rap2 (ENSCARG00000041213) ##22 ENSCARG00000041169 ##22 dolk (ENSCARG00000041164) phyhd1 (ENSCARG00000041016) lrrc8aa (ENSCARG00000040985) dnlz (ENSCARG00000040974) rapgef1b (ENSCARG00000039866) ENSCARG00000039794 ENSCARG00000039782 ENSCARG00000039742 ENSCARG00000039722 si:ch211-241b2.4 (ENSCARG00000039711) ENSCARG00000039636 ENSCARG00000039622 hmgcrb (ENSCARG00000039397) CERT1 (ENSCARG00000034684) SV2C (ENSCARG00000034442) Sarcopterygii ANCESTRAL SPECIES 273 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000154654 ENSGT00940000173158 ENSGT00530000063843.b ENSGT00940000158333 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00530000063604.B Coelacanth MODERN SPECIES 1673 ENSLACG00000000920 cratb (ENSLACG00000002669) PPT2 (ENSLACG00000003336) ENSLACG00000022394 ENSLACG00000003995 ##22 SLC44A4 (ENSLACG00000022221) EHMT2 (ENSLACG00000005307) ZBTB12 (ENSLACG00000006007) ENSLACG00000006117 LTA (ENSLACG00000006878) ENSLACG00000007235 ENSLACG00000009542 ptges (ENSLACG00000009780) ENSLACG00000010194 CLIC1 (ENSLACG00000010454) Tetrapoda ANCESTRAL SPECIES 251 ENSGT00940000160615.b.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00550000075090 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 Anura ANCESTRAL SPECIES 332 ENSGT00940000160615.b.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00550000075090 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 Frog MODERN SPECIES 4 ENSXETG00000048626 ENSXETG00000042835 rgs18 (ENSXETG00000026662) rgs21 (ENSXETG00000035089) ENSXETG00000045757 rgs1 (ENSXETG00000005674) rgs13 (ENSXETG00000036070) rgs2 (ENSXETG00000005675) naaa (ENSXETG00000017223) ro60 (ENSXETG00000017224) notch2 (ENSXETG00000017225) sec22b (ENSXETG00000025777) imp3 (ENSXETG00000038538) prkab2 (ENSXETG00000036380) ENSXETG00000048243 ##22 pde4dip (ENSXETG00000010192) ##22 prrx1 (ENSXETG00000004727) gorab (ENSXETG00000037580) ENSXETG00000048083 ENSXETG00000034511 ntmt2 (ENSXETG00000004731) ENSXETG00000024774 kifap3 (ENSXETG00000004733) scyl3 (ENSXETG00000004735) c1orf112 (ENSXETG00000004738) ENSXETG00000004740 selp (ENSXETG00000004741) SELE (ENSXETG00000048520) ENSXETG00000034276 atf6 (ENSXETG00000004747) olfml2b (ENSXETG00000004748) Amniota ANCESTRAL SPECIES 99 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00390000008608 ENSGT00940000156906 Mammalia ANCESTRAL SPECIES 69 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b Platypus MODERN SPECIES 7 HAO2 (ENSOANG00000043344) ENSOANG00000011957 ZNF697 (ENSOANG00000050352) PHGDH (ENSOANG00000015600) HMGCS2 (ENSOANG00000015590) ENSOANG00000040501 ENSOANG00000003271 ENSOANG00000046985 ENSOANG00000004530 ENSOANG00000047253 ENSOANG00000005495 ENSOANG00000005496 ENSOANG00000011144 SEC22B (ENSOANG00000045488) ENSOANG00000049943 ##22 ENSOANG00000042306 ##22 PRKAB2 (ENSOANG00000003233) FMO5 (ENSOANG00000045449) CHD1L (ENSOANG00000003068) BCL9 (ENSOANG00000043707) ENSOANG00000002805 GJA5 (ENSOANG00000008998) GJA8 (ENSOANG00000037589) ENSOANG00000009732 ENSOANG00000009733 PDZK1 (ENSOANG00000009734) DUSP12 (ENSOANG00000046788) ATF6 (ENSOANG00000009735) OLFML2B (ENSOANG00000047415) ENSOANG00000006737 ENSOANG00000043289 Theria ANCESTRAL SPECIES 3 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Eutheria ANCESTRAL SPECIES ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000153859.a ENSGT00390000013693 ENSGT01100000263543.a ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153859.a ENSGT00390000013693 ENSGT01100000263543.a ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Laurasiatheria_a ANCESTRAL SPECIES ENSGT01100000263543.a.j ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 Artiodactyla ANCESTRAL SPECIES ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Camelidae ANCESTRAL SPECIES 29 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954.f ENSGT00940000162954.e ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 Alpaca MODERN SPECIES 2207 PDE4DIP (ENSVPAG00000009232) ##22 ENSVPAG00000009231 ENSVPAG00000009230 ##22 Arabian camel MODERN SPECIES 35 ENSCDRG00005003000 TBX15 (ENSCDRG00005002975) WARS2 (ENSCDRG00005002953) ENSCDRG00005002937 HAO2 (ENSCDRG00005002914) ENSCDRG00005002892 ENSCDRG00005002880 ZNF697 (ENSCDRG00005002866) PHGDH (ENSCDRG00005002792) HMGCS2 (ENSCDRG00005002749) REG4 (ENSCDRG00005002721) ENSCDRG00005002701 ENSCDRG00005002687 NOTCH2 (ENSCDRG00005002643) SEC22B (ENSCDRG00005002623) PDE4DIP (ENSCDRG00005001996) ##22 ENSCDRG00005001864 PRKAB2 (ENSCDRG00005001847) ZDHHC7 (ENSCDRG00005001833) CRISPLD2 (ENSCDRG00005001807) USP10 (ENSCDRG00005001768) KLHL36 (ENSCDRG00005001746) COTL1 (ENSCDRG00005001729) ENSCDRG00005001718 MEAK7 (ENSCDRG00005001698) ATP2C2 (ENSCDRG00005001592) WFDC1 (ENSCDRG00005001559) KCNG4 (ENSCDRG00005001544) ENSCDRG00005001533 ADAD2 (ENSCDRG00005001513) TAF1C (ENSCDRG00005001497) Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Cetacea ANCESTRAL SPECIES ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000160493.e ENSGT00940000159284 ENSGT00940000160493.f ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Blue whale MODERN SPECIES ENSBMSG00010001110 GDAP2 (ENSBMSG00010001124) WDR3 (ENSBMSG00010001140) ENSBMSG00010001169 ENSBMSG00010001201 TBX15 (ENSBMSG00010001214) WARS2 (ENSBMSG00010001240) HAO2 (ENSBMSG00010001258) ENSBMSG00010001282 ZNF697 (ENSBMSG00010001299) PHGDH (ENSBMSG00010001328) HMGCS2 (ENSBMSG00010001385) ENSBMSG00010001411 NOTCH2 (ENSBMSG00010001428) SEC22B (ENSBMSG00010001456) PDE4DIP (ENSBMSG00010001649) ##22 ENSBMSG00010003163 PRKAB2 (ENSBMSG00010003183) ENSBMSG00010003208 CHD1L (ENSBMSG00010003302) BCL9 (ENSBMSG00010003513) ACP6 (ENSBMSG00010003521) GJA5 (ENSBMSG00010003545) GJA8 (ENSBMSG00010003547) ENSBMSG00010003553 PDZK1 (ENSBMSG00010003562) ENSBMSG00010003575 ENSBMSG00010003585 POLR3C (ENSBMSG00010003595) ENSBMSG00010003614 NUDT17 (ENSBMSG00010003650) Odontoceti ANCESTRAL SPECIES ENSGT00940000157498 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000160493.e ENSGT00940000159284 ENSGT00940000160493.f ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 15 TRIM45 (ENSPCTG00005017746) VTCN1 (ENSPCTG00005017689) MAN1A2 (ENSPCTG00005017570) TENT5C (ENSPCTG00005017545) GDAP2 (ENSPCTG00005017454) WDR3 (ENSPCTG00005017311) SPAG17 (ENSPCTG00005016769) TBX15 (ENSPCTG00005016688) WARS2 (ENSPCTG00005016663) HAO2 (ENSPCTG00005016473) ENSPCTG00005016397 ZNF697 (ENSPCTG00005016347) PHGDH (ENSPCTG00005016270) NOTCH2 (ENSPCTG00005016186) SEC22B (ENSPCTG00005016111) ENSPCTG00005016056 ##22 PDE4DIP (ENSPCTG00005015314) ##22 ENSPCTG00005015102 ENSPCTG00005014945 PRKAB2 (ENSPCTG00005014856) ENSPCTG00005014550 CHD1L (ENSPCTG00005013705) BCL9 (ENSPCTG00005013534) ACP6 (ENSPCTG00005013400) GJA5 (ENSPCTG00005013373) GJA8 (ENSPCTG00005013358) GPR89A (ENSPCTG00005013307) PDZK1 (ENSPCTG00005013079) ENSPCTG00005012998 ENSPCTG00005012939 POLR3C (ENSPCTG00005012859) Sperm whale MODERN SPECIES 15 VTCN1 (ENSPCTG00005017689) MAN1A2 (ENSPCTG00005017570) TENT5C (ENSPCTG00005017545) GDAP2 (ENSPCTG00005017454) WDR3 (ENSPCTG00005017311) SPAG17 (ENSPCTG00005016769) TBX15 (ENSPCTG00005016688) WARS2 (ENSPCTG00005016663) HAO2 (ENSPCTG00005016473) ENSPCTG00005016397 ZNF697 (ENSPCTG00005016347) PHGDH (ENSPCTG00005016270) NOTCH2 (ENSPCTG00005016186) SEC22B (ENSPCTG00005016111) ENSPCTG00005016056 ##22 PDE4DIP (ENSPCTG00005015314) ##22 ENSPCTG00005015102 ENSPCTG00005014945 PRKAB2 (ENSPCTG00005014856) ENSPCTG00005014550 CHD1L (ENSPCTG00005013705) BCL9 (ENSPCTG00005013534) ACP6 (ENSPCTG00005013400) GJA5 (ENSPCTG00005013373) GJA8 (ENSPCTG00005013358) GPR89A (ENSPCTG00005013307) PDZK1 (ENSPCTG00005013079) ENSPCTG00005012998 ENSPCTG00005012939 POLR3C (ENSPCTG00005012859) ITGA10 (ENSPCTG00005012521) Odontoceti_a ANCESTRAL SPECIES ENSGT00940000157498 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000160493.e.b ENSGT00940000159284 ENSGT00940000160493.f ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Dolphin MODERN SPECIES 2132 PDE4DIP (ENSTTRG00000012144) ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000157498 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000160493.e.b ENSGT00940000159284 ENSGT00940000160493.f ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT01010000228887 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Monodontidae ANCESTRAL SPECIES ENSGT00940000157300 ENSGT00940000157498 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000160493.e.b ENSGT00940000159284 ENSGT00940000160493.f ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Beluga whale MODERN SPECIES 74 TRIM45 (ENSDLEG00000016923) MAN1A2 (ENSDLEG00000007933) FAM46C (ENSDLEG00000007955) GDAP2 (ENSDLEG00000007964) WDR3 (ENSDLEG00000007988) SPAG17 (ENSDLEG00000008058) TBX15 (ENSDLEG00000008335) WARS2 (ENSDLEG00000008432) HAO2 (ENSDLEG00000008484) ENSDLEG00000008503 ZNF697 (ENSDLEG00000008534) PHGDH (ENSDLEG00000008553) HMGCS2 (ENSDLEG00000008595) NOTCH2 (ENSDLEG00000008673) SEC22B (ENSDLEG00000008747) PDE4DIP (ENSDLEG00000009003) ##22 ENSDLEG00000010511 ##22 ENSDLEG00000010519 ENSDLEG00000010528 ENSDLEG00000010535 PRKAB2 (ENSDLEG00000010556) CHD1L (ENSDLEG00000010686) BCL9 (ENSDLEG00000011971) ACP6 (ENSDLEG00000011988) GJA5 (ENSDLEG00000012001) GJA8 (ENSDLEG00000012004) ENSDLEG00000012011 PDZK1 (ENSDLEG00000012026) RNF115 (ENSDLEG00000012048) POLR3C (ENSDLEG00000012058) NUDT17 (ENSDLEG00000012106) Narwhal DUPLICATION Narwhal MODERN SPECIES 304 VTCN1 (ENSMMNG00015003230) MAN1A2 (ENSMMNG00015003175) TENT5C (ENSMMNG00015003165) GDAP2 (ENSMMNG00015003116) WDR3 (ENSMMNG00015003055) SPAG17 (ENSMMNG00015002964) TBX15 (ENSMMNG00015002896) WARS2 (ENSMMNG00015002880) HAO2 (ENSMMNG00015002847) ENSMMNG00015002833 ZNF697 (ENSMMNG00015002822) PHGDH (ENSMMNG00015002791) ENSMMNG00015002762 NOTCH2 (ENSMMNG00015002664) SEC22B (ENSMMNG00015002608) ENSMMNG00015002456 ##22 ENSMMNG00015002274 ##22 ENSMMNG00015002199 PRKAB2 (ENSMMNG00015002168) ENSMMNG00015002123 CHD1L (ENSMMNG00015001842) ENSMMNG00015001727 BCL9 (ENSMMNG00015001709) ACP6 (ENSMMNG00015001670) GJA5 (ENSMMNG00015001644) GJA8 (ENSMMNG00015001638) ENSMMNG00015001615 PDZK1 (ENSMMNG00015001570) RNF115 (ENSMMNG00015001502) POLR3C (ENSMMNG00015001448) NUDT17 (ENSMMNG00015001410) Narwhal MODERN SPECIES 304 MAN1A2 (ENSMMNG00015003175) TENT5C (ENSMMNG00015003165) GDAP2 (ENSMMNG00015003116) WDR3 (ENSMMNG00015003055) SPAG17 (ENSMMNG00015002964) TBX15 (ENSMMNG00015002896) WARS2 (ENSMMNG00015002880) HAO2 (ENSMMNG00015002847) ENSMMNG00015002833 ZNF697 (ENSMMNG00015002822) PHGDH (ENSMMNG00015002791) ENSMMNG00015002762 NOTCH2 (ENSMMNG00015002664) SEC22B (ENSMMNG00015002608) ENSMMNG00015002456 ##22 ENSMMNG00015002274 ##22 ENSMMNG00015002199 PRKAB2 (ENSMMNG00015002168) ENSMMNG00015002123 CHD1L (ENSMMNG00015001842) ENSMMNG00015001727 BCL9 (ENSMMNG00015001709) ACP6 (ENSMMNG00015001670) GJA5 (ENSMMNG00015001644) GJA8 (ENSMMNG00015001638) ENSMMNG00015001615 PDZK1 (ENSMMNG00015001570) RNF115 (ENSMMNG00015001502) POLR3C (ENSMMNG00015001448) NUDT17 (ENSMMNG00015001410) PIAS3 (ENSMMNG00015001315) Vaquita DUPLICATION Vaquita MODERN SPECIES GDAP2 (ENSPSNG00000003591) WDR3 (ENSPSNG00000003625) SPAG17 (ENSPSNG00000003683) TBX15 (ENSPSNG00000003785) WARS2 (ENSPSNG00000003819) HAO2 (ENSPSNG00000003847) ENSPSNG00000003865 ZNF697 (ENSPSNG00000003876) PHGDH (ENSPSNG00000003909) ENSPSNG00000003958 ENSPSNG00000003977 NOTCH2 (ENSPSNG00000004012) SEC22B (ENSPSNG00000004063) ENSPSNG00000004164 ##22 ENSPSNG00000004299 ##22 ENSPSNG00000004320 ##22 ENSPSNG00000004389 PRKAB2 (ENSPSNG00000004433) CHD1L (ENSPSNG00000004698) ENSPSNG00000005153 BCL9 (ENSPSNG00000005241) ACP6 (ENSPSNG00000005293) ENSPSNG00000000045 GJA5 (ENSPSNG00000000070) GJA8 (ENSPSNG00000000089) ENSPSNG00000000162 PDZK1 (ENSPSNG00000000251) ENSPSNG00000000296 RNF115 (ENSPSNG00000000340) POLR3C (ENSPSNG00000000389) NUDT17 (ENSPSNG00000000422) Vaquita DUPLICATION Vaquita MODERN SPECIES TENT5C (ENSPSNG00000003573) GDAP2 (ENSPSNG00000003591) WDR3 (ENSPSNG00000003625) SPAG17 (ENSPSNG00000003683) TBX15 (ENSPSNG00000003785) WARS2 (ENSPSNG00000003819) HAO2 (ENSPSNG00000003847) ENSPSNG00000003865 ZNF697 (ENSPSNG00000003876) PHGDH (ENSPSNG00000003909) ENSPSNG00000003958 ENSPSNG00000003977 NOTCH2 (ENSPSNG00000004012) SEC22B (ENSPSNG00000004063) ENSPSNG00000004164 ##22 ENSPSNG00000004299 ##22 ENSPSNG00000004320 ##22 ENSPSNG00000004389 PRKAB2 (ENSPSNG00000004433) CHD1L (ENSPSNG00000004698) ENSPSNG00000005153 BCL9 (ENSPSNG00000005241) ACP6 (ENSPSNG00000005293) ENSPSNG00000000045 GJA5 (ENSPSNG00000000070) GJA8 (ENSPSNG00000000089) ENSPSNG00000000162 PDZK1 (ENSPSNG00000000251) ENSPSNG00000000296 RNF115 (ENSPSNG00000000340) POLR3C (ENSPSNG00000000389) Vaquita MODERN SPECIES MAN1A2 (ENSPSNG00000003561) TENT5C (ENSPSNG00000003573) GDAP2 (ENSPSNG00000003591) WDR3 (ENSPSNG00000003625) SPAG17 (ENSPSNG00000003683) TBX15 (ENSPSNG00000003785) WARS2 (ENSPSNG00000003819) HAO2 (ENSPSNG00000003847) ENSPSNG00000003865 ZNF697 (ENSPSNG00000003876) PHGDH (ENSPSNG00000003909) ENSPSNG00000003958 ENSPSNG00000003977 NOTCH2 (ENSPSNG00000004012) SEC22B (ENSPSNG00000004063) ENSPSNG00000004164 ##22 ENSPSNG00000004299 ##22 ENSPSNG00000004320 ##22 ENSPSNG00000004389 PRKAB2 (ENSPSNG00000004433) CHD1L (ENSPSNG00000004698) ENSPSNG00000005153 BCL9 (ENSPSNG00000005241) ACP6 (ENSPSNG00000005293) ENSPSNG00000000045 GJA5 (ENSPSNG00000000070) GJA8 (ENSPSNG00000000089) ENSPSNG00000000162 PDZK1 (ENSPSNG00000000251) ENSPSNG00000000296 RNF115 (ENSPSNG00000000340) Pecora ANCESTRAL SPECIES 2 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954.c.b ENSGT00940000162954.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.b ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Yarkand deer MODERN SPECIES 12 GDAP2 (ENSCHYG00000012378) WDR3 (ENSCHYG00000012236) SPAG17 (ENSCHYG00000012111) TBX15 (ENSCHYG00000011911) WARS2 (ENSCHYG00000011828) ENSCHYG00000011778 HAO2 (ENSCHYG00000011716) ENSCHYG00000011649 ZNF697 (ENSCHYG00000011608) PHGDH (ENSCHYG00000011474) HMGCS2 (ENSCHYG00000011318) REG4 (ENSCHYG00000011235) ENSCHYG00000011173 NOTCH2 (ENSCHYG00000010973) SEC22B (ENSCHYG00000010779) PDE4DIP (ENSCHYG00000006902) ##22 ENSCHYG00000006443 CHD1L (ENSCHYG00000005754) ENSCHYG00000005572 BCL9 (ENSCHYG00000005533) ACP6 (ENSCHYG00000005483) GJA5 (ENSCHYG00000005464) GJA8 (ENSCHYG00000005455) ENSCHYG00000005393 PDZK1 (ENSCHYG00000005304) RNF115 (ENSCHYG00000005206) POLR3C (ENSCHYG00000005139) NUDT17 (ENSCHYG00000005077) PIAS3 (ENSCHYG00000005027) ANKRD35 (ENSCHYG00000004968) ITGA10 (ENSCHYG00000004850) Percora_a ANCESTRAL SPECIES 1 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954.c.b ENSGT00940000162954.d ENSGT00940000162954.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.b ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Bovidae ANCESTRAL SPECIES 1 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954.c.b ENSGT00940000162954.d ENSGT00940000162954.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.b ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Caprinae ANCESTRAL SPECIES 2 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954.d ENSGT00940000162954.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.b ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Rambouillet Sheep MODERN SPECIES TENT5C (ENSOARG00020001120) GDAP2 (ENSOARG00020001139) WDR3 (ENSOARG00020001170) ENSOARG00020001200 TBX15 (ENSOARG00020001253) WARS2 (ENSOARG00020001286) HAO2 (ENSOARG00020001334) HSD3B1 (ENSOARG00020001361) ZNF697 (ENSOARG00020001371) PHGDH (ENSOARG00020001394) HMGCS2 (ENSOARG00020001485) REG4 (ENSOARG00020001515) ADAM30 (ENSOARG00020001541) NOTCH2 (ENSOARG00020001563) SEC22B (ENSOARG00020001722) PDE4DIP (ENSOARG00020001810) ##22 ENSOARG00020002454 ENSOARG00020002482 ENSOARG00020002490 ENSOARG00020002495 ENSOARG00020002501 ENSOARG00020002507 ENSOARG00020002526 ENSOARG00020002566 ENSOARG00020002576 PRKAB2 (ENSOARG00020002599) FMO5 (ENSOARG00020002609) CHD1L (ENSOARG00020002654) ENSOARG00020002939 BCL9 (ENSOARG00020002952) ACP6 (ENSOARG00020002966) Goat MODERN SPECIES 22 GDAP2 (ENSCHIG00000019563) WDR3 (ENSCHIG00000010490) SPAG17 (ENSCHIG00000014664) ENSCHIG00000014484 TBX15 (ENSCHIG00000014427) WARS2 (ENSCHIG00000013499) HAO2 (ENSCHIG00000026466) 3BHSD (ENSCHIG00000020217) ZNF697 (ENSCHIG00000014100) PHGDH (ENSCHIG00000018423) HMGCS2 (ENSCHIG00000025654) REG4 (ENSCHIG00000015183) ADAM30 (ENSCHIG00000027182) NOTCH2 (ENSCHIG00000022464) SEC22B (ENSCHIG00000010105) PDE4DIP (ENSCHIG00000010241) ##22 PRKAB2 (ENSCHIG00000015966) FMO5 (ENSCHIG00000014242) CHD1L (ENSCHIG00000013871) ENSCHIG00000026995 ENSCHIG00000022455 ENSCHIG00000009796 BCL9 (ENSCHIG00000009988) ACP6 (ENSCHIG00000024823) ENSCHIG00000018629 GJA5 (ENSCHIG00000010714) ENSCHIG00000017806 PDZK1 (ENSCHIG00000011722) RNF115 (ENSCHIG00000025502) POLR3C (ENSCHIG00000022431) NUDT17 (ENSCHIG00000014413) Bovinae ANCESTRAL SPECIES 1 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954.c.b ENSGT00940000162954.d ENSGT00940000162954.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263514.B.m.a.b ENSGT01100000263570.B.t.b ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 American bison MODERN SPECIES 2748 NOTCH2 (ENSBBBG00000007547) ENSBBBG00000013688 PDE4DIP (ENSBBBG00000014087) ##22 Bos ANCESTRAL SPECIES ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.a.a.a ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954.c.b ENSGT00940000162954.d ENSGT00940000162954.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263514.B.m.a.b ENSGT01100000263570.B.t.b ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 Bos_b ANCESTRAL SPECIES 1 ENSGT00390000013693.a ENSGT00940000159013 ENSGT00940000153724.A ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.a.a.a ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954.c.b ENSGT00940000162954.d ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b.d ENSGT00420000029746.e.b.c ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263514.B.m.a.b ENSGT01100000263570.B.t.b ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 Cow MODERN SPECIES 22 SPAG17 (ENSBTAG00000001080) ENSBTAG00000048491 TBX15 (ENSBTAG00000007767) WARS2 (ENSBTAG00000005064) HAO2 (ENSBTAG00000000123) HSD3B1 (ENSBTAG00000006769) ZNF697 (ENSBTAG00000032187) PHGDH (ENSBTAG00000039719) HMGCS2 (ENSBTAG00000003898) REG4 (ENSBTAG00000032193) ENSBTAG00000046293 ENSBTAG00000046315 NOTCH2 (ENSBTAG00000007909) SEC22B (ENSBTAG00000007712) ENSBTAG00000017316 PDE4DIP (ENSBTAG00000001564) ##22 ENSBTAG00000052039 PRKAB2 (ENSBTAG00000014387) ENSBTAG00000051677 FMO5 (ENSBTAG00000010841) CHD1L (ENSBTAG00000020831) ENSBTAG00000054541 ENSBTAG00000035013 OR13L12 (ENSBTAG00000046872) OR13L2 (ENSBTAG00000046242) BCL9 (ENSBTAG00000002422) ACP6 (ENSBTAG00000017051) GJA5 (ENSBTAG00000006720) GJA8 (ENSBTAG00000021833) GPR89A (ENSBTAG00000005809) PDZK1 (ENSBTAG00000005810) Hybrid Bos Indicus MODERN SPECIES 22 ENSBIXG00005021669 TBX15 (ENSBIXG00005007374) WARS2 (ENSBIXG00005021872) ENSBIXG00005021892 HAO2 (ENSBIXG00005021914) ENSBIXG00005021936 ENSBIXG00005021962 ZNF697 (ENSBIXG00005021978) PHGDH (ENSBIXG00005022089) HMGCS2 (ENSBIXG00005022195) REG4 (ENSBIXG00005007763) ENSBIXG00005003789 ENSBIXG00005022285 NOTCH2 (ENSBIXG00005022312) SEC22B (ENSBIXG00005022367) PDE4DIP (ENSBIXG00005022871) ##22 ENSBIXG00005023144 ENSBIXG00005003967 ENSBIXG00005003982 FMO5 (ENSBIXG00005023419) CHD1L (ENSBIXG00005023674) ENSBIXG00005004070 ENSBIXG00005004071 ENSBIXG00005023792 BCL9 (ENSBIXG00005023888) ACP6 (ENSBIXG00005023973) GJA5 (ENSBIXG00005024004) GJA8 (ENSBIXG00005004114) ENSBIXG00005024260 ENSBIXG00005024308 PDZK1 (ENSBIXG00005024420) Bos_a ANCESTRAL SPECIES 32 ENSGT00940000159013 ENSGT00940000153724.A ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.a.a.a ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954.c.b ENSGT00940000162954.d ENSGT00940000162954.c.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 Domestic yak MODERN SPECIES 22 TBX15 (ENSBGRG00000012008) WARS2 (ENSBGRG00000012212) ENSBGRG00000012328 HAO2 (ENSBGRG00000012350) ENSBGRG00000012402 ZNF697 (ENSBGRG00000012446) PHGDH (ENSBGRG00000012503) HMGCS2 (ENSBGRG00000012904) REG4 (ENSBGRG00000013043) ENSBGRG00000013175 ENSBGRG00000013234 NOTCH2 (ENSBGRG00000013357) SEC22B (ENSBGRG00000013753) ENSBGRG00000013856 ENSBGRG00000013889 PDE4DIP (ENSBGRG00000013976) ##22 RWDD3 (ENSBGRG00000016161) TLCD4 (ENSBGRG00000016247) ALG14 (ENSBGRG00000016310) ENSBGRG00000016412 SLC44A3 (ENSBGRG00000016590) ENSBGRG00000000201 F3 (ENSBGRG00000000221) ABCD3 (ENSBGRG00000000245) ENSBGRG00000000287 ENSBGRG00000000295 ARHGAP29 (ENSBGRG00000000321) ABCA4 (ENSBGRG00000000369) GCLM (ENSBGRG00000000503) DNTTIP2 (ENSBGRG00000000534) ENSBGRG00000000572 Wild yak MODERN SPECIES 709 WDR3 (ENSBMUG00000012791) SPAG17 (ENSBMUG00000012756) TBX15 (ENSBMUG00000012717) WARS2 (ENSBMUG00000012704) HAO2 (ENSBMUG00000012689) ENSBMUG00000012673 ZNF697 (ENSBMUG00000012663) PHGDH (ENSBMUG00000012563) HMGCS2 (ENSBMUG00000012453) REG4 (ENSBMUG00000012427) ENSBMUG00000012408 ENSBMUG00000012400 ENSBMUG00000012392 NOTCH2 (ENSBMUG00000012357) SEC22B (ENSBMUG00000012316) PDE4DIP (ENSBMUG00000012201) ##22 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 1200 ENSMMSG00000019180 ##22 ENSMMSG00000019134 PRKAB2 (ENSMMSG00000019036) ENSMMSG00000018967 ENSMMSG00000018933 CHD1L (ENSMMSG00000018089) ENSMMSG00000017995 ENSMMSG00000017953 BCL9 (ENSMMSG00000017896) ACP6 (ENSMMSG00000017823) GJA5 (ENSMMSG00000017803) GJA8 (ENSMMSG00000017790) ENSMMSG00000017763 ENSMMSG00000017716 PDZK1 (ENSMMSG00000017466) RNF115 (ENSMMSG00000017432) Siberian musk deer MODERN SPECIES 98 ENSMMSG00000013577 ENSMMSG00000013590 TBX15 (ENSMMSG00000013611) WARS2 (ENSMMSG00000013648) HAO2 (ENSMMSG00000013690) ENSMMSG00000013712 ZNF697 (ENSMMSG00000013724) PHGDH (ENSMMSG00000013755) HMGCS2 (ENSMMSG00000013835) REG4 (ENSMMSG00000000022) ENSMMSG00000000045 ENSMMSG00000000059 NOTCH2 (ENSMMSG00000000075) SEC22B (ENSMMSG00000000100) ENSMMSG00000000114 ENSMMSG00000000186 ##22 Suina ANCESTRAL SPECIES 32 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Chacoan peccary MODERN SPECIES 29 TENT5C (ENSCWAG00000002576) GDAP2 (ENSCWAG00000002542) WDR3 (ENSCWAG00000002500) SPAG17 (ENSCWAG00000002431) TBX15 (ENSCWAG00000002391) WARS2 (ENSCWAG00000002377) HAO2 (ENSCWAG00000002354) ENSCWAG00000002334 ZNF697 (ENSCWAG00000002319) PHGDH (ENSCWAG00000002289) HMGCS2 (ENSCWAG00000002224) REG4 (ENSCWAG00000002183) ADAM30 (ENSCWAG00000002169) NOTCH2 (ENSCWAG00000002118) SEC22B (ENSCWAG00000002077) PDE4DIP (ENSCWAG00000000459) ##22 ENSCWAG00000000055 PRKAB2 (ENSCWAG00000014832) FMO5 (ENSCWAG00000014798) CHD1L (ENSCWAG00000012998) ENSCWAG00000012894 BCL9 (ENSCWAG00000012850) ACP6 (ENSCWAG00000012718) GJA5 (ENSCWAG00000012696) GJA8 (ENSCWAG00000012679) ENSCWAG00000012533 PDZK1 (ENSCWAG00000012473) RNF115 (ENSCWAG00000012426) POLR3C (ENSCWAG00000012364) NUDT17 (ENSCWAG00000012279) PIAS3 (ENSCWAG00000012113) Pig MODERN SPECIES 12 WARS2 (ENSSSCG00000027153) HAO2 (ENSSSCG00000006720) ENSSSCG00000006719 ZNF697 (ENSSSCG00000063017) PHGDH (ENSSSCG00000006717) HMGCS2 (ENSSSCG00000036808) ENSSSCG00000058639 REG4 (ENSSSCG00000040947) ADAM30 (ENSSSCG00000006713) ENSSSCG00000058164 ENSSSCG00000056978 ENSSSCG00000054500 NOTCH2 (ENSSSCG00000006709) SEC22B (ENSSSCG00000020964) ENSSSCG00000049559 PDE4DIP (ENSSSCG00000024481) ##22 ENSSSCG00000060248 PRKAB2 (ENSSSCG00000006703) FMO5 (ENSSSCG00000006702) CHD1L (ENSSSCG00000006701) ENSSSCG00000033862 BCL9 (ENSSSCG00000006698) ACP6 (ENSSSCG00000006697) GJA5 (ENSSSCG00000006696) GJA8 (ENSSSCG00000036239) ENSSSCG00000006694 PDZK1 (ENSSSCG00000006693) RNF115 (ENSSSCG00000037355) POLR3C (ENSSSCG00000006691) NUDT17 (ENSSSCG00000006690) PIAS3 (ENSSSCG00000006689) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000013693 ENSGT01100000263543.a.j ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b.h.a ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 Carnivora ANCESTRAL SPECIES 1 ENSGT00390000013693 ENSGT01100000263543.a.j ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b.h.a ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 Caniformia ANCESTRAL SPECIES 2 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT01100000263543.a.j ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Caniformia_b ANCESTRAL SPECIES 1 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT01100000263543.a.j ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Mustelinae ANCESTRAL SPECIES 47 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Ferret MODERN SPECIES 323 TENT5C (ENSMPUG00000001581) GDAP2 (ENSMPUG00000001575) WDR3 (ENSMPUG00000001565) SPAG17 (ENSMPUG00000001553) TBX15 (ENSMPUG00000001549) WARS2 (ENSMPUG00000001541) HAO2 (ENSMPUG00000001491) ENSMPUG00000001463 ZNF697 (ENSMPUG00000001459) PHGDH (ENSMPUG00000001454) HMGCS2 (ENSMPUG00000001448) REG4 (ENSMPUG00000001409) ADAM30 (ENSMPUG00000019385) NOTCH2 (ENSMPUG00000001399) SEC22B (ENSMPUG00000001397) PDE4DIP (ENSMPUG00000001386) ##22 ENSMPUG00000001381 ENSMPUG00000001378 American mink MODERN SPECIES 489 ENSNVIG00000008481 ##22 PDE4DIP (ENSNVIG00000008508) ##22 SC22B (ENSNVIG00000008984) NOTCH2 (ENSNVIG00000009002) ENSNVIG00000009081 REG4 (ENSNVIG00000009112) HMGCS2 (ENSNVIG00000009139) ENSNVIG00000009153 PHGDH (ENSNVIG00000009186) ZNF697 (ENSNVIG00000009291) ENSNVIG00000009295 HAO2 (ENSNVIG00000009307) Ursidae ANCESTRAL SPECIES 32 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT01100000263543.a.j.h.b ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Giant Panda MODERN SPECIES 5 RNF165 (ENSAMEG00000012667) C18orf25 (ENSAMEG00000012662) ENSAMEG00000025621 HAUS1 (ENSAMEG00000012644) ATP5F1A (ENSAMEG00000012614) PSTPIP2 (ENSAMEG00000012579) EPG5 (ENSAMEG00000012534) ENSAMEG00000027408 SLC14A1 (ENSAMEG00000012521) ENSAMEG00000005289 SETBP1 (ENSAMEG00000029118) SYT4 (ENSAMEG00000006769) RIT2 (ENSAMEG00000024343) ENSAMEG00000007466 ENSAMEG00000011743 ENSAMEG00000011654 ##22 ENSAMEG00000025537 ENSAMEG00000017059 KIAA1328 (ENSAMEG00000019160) ENSAMEG00000000934 FHOD3 (ENSAMEG00000000931) MOCOS (ENSAMEG00000000915) ELP2 (ENSAMEG00000000879) SLC39A6 (ENSAMEG00000000852) RPRD1A (ENSAMEG00000000830) C18orf21 (ENSAMEG00000000828) GALNT1 (ENSAMEG00000000389) INO80C (ENSAMEG00000000433) ZNF396 (ENSAMEG00000027230) ZNF24 (ENSAMEG00000026662) ENSAMEG00000027517 Ursus ANCESTRAL SPECIES 107 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT01100000263543.a.j.h.b ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 American black bear DUPLICATION American black bear DUPLICATION American black bear MODERN SPECIES 9223 ENSUAMG00000001510 ##22 American black bear MODERN SPECIES 8716 ENSUAMG00000003858 ##22 American black bear MODERN SPECIES 3585 ENSUAMG00000002053 ENSUAMG00000002049 ENSUAMG00000001971 ##22 ENSUAMG00000001832 ##22 American black bear MODERN SPECIES 3585 ENSUAMG00000002053 ENSUAMG00000002049 ENSUAMG00000001971 ##22 ENSUAMG00000001832 ##22 Polar bear DUPLICATION Polar bear MODERN SPECIES 379 ENSUMAG00000024870 ##22 Polar bear MODERN SPECIES 288 ENSUMAG00000000594 ENSUMAG00000000573 TBX15 (ENSUMAG00000000567) WARS2 (ENSUMAG00000000553) HAO2 (ENSUMAG00000000433) ENSUMAG00000000404 PHGDH (ENSUMAG00000000360) HMGCS2 (ENSUMAG00000000336) REG4 (ENSUMAG00000000264) ADAM30 (ENSUMAG00000000101) NOTCH2 (ENSUMAG00000025650) SEC22B (ENSUMAG00000025648) ENSUMAG00000025646 ##22 ENSUMAG00000025645 ##22 Polar bear MODERN SPECIES 288 ENSUMAG00000000594 ENSUMAG00000000573 TBX15 (ENSUMAG00000000567) WARS2 (ENSUMAG00000000553) HAO2 (ENSUMAG00000000433) ENSUMAG00000000404 PHGDH (ENSUMAG00000000360) HMGCS2 (ENSUMAG00000000336) REG4 (ENSUMAG00000000264) ADAM30 (ENSUMAG00000000101) NOTCH2 (ENSUMAG00000025650) SEC22B (ENSUMAG00000025648) ENSUMAG00000025646 ##22 ENSUMAG00000025645 ##22 Canidae ANCESTRAL SPECIES 25 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011.b ENSGT00940000162954.h ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000186084 ENSGT00940000153169.A.b.b.a.a.a.b.l.h ENSGT00950000183190.a.a.b ##22 Red fox DUPLICATION Red fox DUPLICATION Red fox MODERN SPECIES 293 ENSVVUG00000030419 REG4 (ENSVVUG00000030420) ENSVVUG00000030421 ADAM30 (ENSVVUG00000030422) NOTCH2 (ENSVVUG00000030423) SEC22B (ENSVVUG00000030424) ENSVVUG00000030427 ENSVVUG00000030428 ##22 ENSVVUG00000030430 ##22 ENSVVUG00000030433 ##22 Red fox MODERN SPECIES 293 ENSVVUG00000030419 REG4 (ENSVVUG00000030420) ENSVVUG00000030421 ADAM30 (ENSVVUG00000030422) NOTCH2 (ENSVVUG00000030423) SEC22B (ENSVVUG00000030424) ENSVVUG00000030427 ENSVVUG00000030428 ##22 ENSVVUG00000030430 ##22 ENSVVUG00000030433 ##22 Red fox MODERN SPECIES 293 ENSVVUG00000030419 REG4 (ENSVVUG00000030420) ENSVVUG00000030421 ADAM30 (ENSVVUG00000030422) NOTCH2 (ENSVVUG00000030423) SEC22B (ENSVVUG00000030424) ENSVVUG00000030427 ENSVVUG00000030428 ##22 ENSVVUG00000030430 ##22 ENSVVUG00000030433 ##22 Canis_lupus ANCESTRAL SPECIES ENSGT00950000183190.a.a.b ##22 Dog MODERN SPECIES 8 WDR3 (ENSCAFG00845005942) SPAG17 (ENSCAFG00845005984) TBX15 (ENSCAFG00845006079) WARS2 (ENSCAFG00845006189) HAO2 (ENSCAFG00845006278) HSD3B2 (ENSCAFG00845006351) ZNF697 (ENSCAFG00845006387) ENSCAFG00845006411 ENSCAFG00845006590 HMGCS2 (ENSCAFG00845006979) ENSCAFG00845007114 ENSCAFG00845007183 NOTCH2 (ENSCAFG00845007331) ENSCAFG00845007734 ENSCAFG00845007848 ENSCAFG00845008064 ##22 ENSCAFG00845008556 ENSCAFG00845008609 ENSCAFG00845008699 ENSCAFG00845008727 ENSCAFG00845008839 FMO5 (ENSCAFG00845008928) CHD1L (ENSCAFG00845009101) ENSCAFG00845009667 BCL9 (ENSCAFG00845009728) ACP6 (ENSCAFG00845009847) GJA5 (ENSCAFG00845009988) GJA8 (ENSCAFG00845010011) GPR89A (ENSCAFG00845010053) ENSCAFG00845010156 ENSCAFG00845010227 Dingo DUPLICATION Dingo MODERN SPECIES 223 WDR3 (ENSCAFG00020020610) ENSCAFG00020020597 TBX15 (ENSCAFG00020020577) WARS2 (ENSCAFG00020020570) HAO2 (ENSCAFG00020020545) ENSCAFG00020020537 ZNF697 (ENSCAFG00020020535) ENSCAFG00020020479 HMGCS2 (ENSCAFG00020020467) ENSCAFG00020020458 ENSCAFG00020020416 ENSCAFG00020020406 ENSCAFG00020020320 SEC22B (ENSCAFG00020020305) ENSCAFG00020020304 ENSCAFG00020020292 ##22 ENSCAFG00020020276 ##22 ENSCAFG00020020260 ##22 ENSCAFG00020020218 ENSCAFG00020020213 ENSCAFG00020020209 PRKAB2 (ENSCAFG00020020199) FMO5 (ENSCAFG00020020194) CHD1L (ENSCAFG00020020121) ENSCAFG00020020112 BCL9 (ENSCAFG00020020104) ACP6 (ENSCAFG00020020101) GJA5 (ENSCAFG00020020099) GJA8 (ENSCAFG00020020095) ENSCAFG00020020088 ENSCAFG00020020077 Dingo DUPLICATION Dingo MODERN SPECIES 223 ENSCAFG00020020597 TBX15 (ENSCAFG00020020577) WARS2 (ENSCAFG00020020570) HAO2 (ENSCAFG00020020545) ENSCAFG00020020537 ZNF697 (ENSCAFG00020020535) ENSCAFG00020020479 HMGCS2 (ENSCAFG00020020467) ENSCAFG00020020458 ENSCAFG00020020416 ENSCAFG00020020406 ENSCAFG00020020320 SEC22B (ENSCAFG00020020305) ENSCAFG00020020304 ENSCAFG00020020292 ##22 ENSCAFG00020020276 ##22 ENSCAFG00020020260 ##22 ENSCAFG00020020218 ENSCAFG00020020213 ENSCAFG00020020209 PRKAB2 (ENSCAFG00020020199) FMO5 (ENSCAFG00020020194) CHD1L (ENSCAFG00020020121) ENSCAFG00020020112 BCL9 (ENSCAFG00020020104) ACP6 (ENSCAFG00020020101) GJA5 (ENSCAFG00020020099) GJA8 (ENSCAFG00020020095) ENSCAFG00020020088 ENSCAFG00020020077 CD160 (ENSCAFG00020020071) Dingo MODERN SPECIES 223 TBX15 (ENSCAFG00020020577) WARS2 (ENSCAFG00020020570) HAO2 (ENSCAFG00020020545) ENSCAFG00020020537 ZNF697 (ENSCAFG00020020535) ENSCAFG00020020479 HMGCS2 (ENSCAFG00020020467) ENSCAFG00020020458 ENSCAFG00020020416 ENSCAFG00020020406 ENSCAFG00020020320 SEC22B (ENSCAFG00020020305) ENSCAFG00020020304 ENSCAFG00020020292 ##22 ENSCAFG00020020276 ##22 ENSCAFG00020020260 ##22 ENSCAFG00020020218 ENSCAFG00020020213 ENSCAFG00020020209 PRKAB2 (ENSCAFG00020020199) FMO5 (ENSCAFG00020020194) CHD1L (ENSCAFG00020020121) ENSCAFG00020020112 BCL9 (ENSCAFG00020020104) ACP6 (ENSCAFG00020020101) GJA5 (ENSCAFG00020020099) GJA8 (ENSCAFG00020020095) ENSCAFG00020020088 ENSCAFG00020020077 CD160 (ENSCAFG00020020071) ENSCAFG00020020069 Felidae ANCESTRAL SPECIES 10 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b.h.a ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a.f ENSGT01100000263570.B.t.a.e ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 Cat MODERN SPECIES 239 TENT5C (ENSFCAG00000022444) GDAP2 (ENSFCAG00000003468) WDR3 (ENSFCAG00000003469) ENSFCAG00000011531 TBX15 (ENSFCAG00000043861) WARS2 (ENSFCAG00000007370) HAO2 (ENSFCAG00000002698) HSD3B2 (ENSFCAG00000025160) ENSFCAG00000048538 ZNF697 (ENSFCAG00000026025) PHGDH (ENSFCAG00000011474) HMGCS2 (ENSFCAG00000011475) REG4 (ENSFCAG00000038303) NOTCH2 (ENSFCAG00000009649) SEC22B (ENSFCAG00000022013) PDE4DIP (ENSFCAG00000028868) ##22 ENSFCAG00000051298 PRKAB2 (ENSFCAG00000038678) FMO5 (ENSFCAG00000013037) CHD1L (ENSFCAG00000007777) ENSFCAG00000033242 ENSFCAG00000027476 BCL9 (ENSFCAG00000000349) ACP6 (ENSFCAG00000025430) GJA5 (ENSFCAG00000000351) GJA8 (ENSFCAG00000012909) ENSFCAG00000024477 PDZK1 (ENSFCAG00000013368) CD160 (ENSFCAG00000013367) RNF115 (ENSFCAG00000039680) POLR3C (ENSFCAG00000013360) Panthera ANCESTRAL SPECIES 4 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 Tiger DUPLICATION Tiger DUPLICATION Tiger MODERN SPECIES 63 TENT5C (ENSPTIG00000007350) GDAP2 (ENSPTIG00000015029) WDR3 (ENSPTIG00000016747) SPAG17 (ENSPTIG00000018997) TBX15 (ENSPTIG00000020538) WARS2 (ENSPTIG00000021158) HAO2 (ENSPTIG00000021750) ENSPTIG00000000014 ZNF697 (ENSPTIG00000002818) PHGDH (ENSPTIG00000004897) HMGCS2 (ENSPTIG00000011965) REG4 (ENSPTIG00000013579) NOTCH2 (ENSPTIG00000014724) SEC22B (ENSPTIG00000017942) ENSPTIG00000018371 ENSPTIG00000018548 ##22 ENSPTIG00000019579 ##22 ENSPTIG00000012730 ##22 Tiger MODERN SPECIES 63 GDAP2 (ENSPTIG00000015029) WDR3 (ENSPTIG00000016747) SPAG17 (ENSPTIG00000018997) TBX15 (ENSPTIG00000020538) WARS2 (ENSPTIG00000021158) HAO2 (ENSPTIG00000021750) ENSPTIG00000000014 ZNF697 (ENSPTIG00000002818) PHGDH (ENSPTIG00000004897) HMGCS2 (ENSPTIG00000011965) REG4 (ENSPTIG00000013579) NOTCH2 (ENSPTIG00000014724) SEC22B (ENSPTIG00000017942) ENSPTIG00000018371 ENSPTIG00000018548 ##22 ENSPTIG00000019579 ##22 ENSPTIG00000012730 ##22 Tiger MODERN SPECIES 63 WDR3 (ENSPTIG00000016747) SPAG17 (ENSPTIG00000018997) TBX15 (ENSPTIG00000020538) WARS2 (ENSPTIG00000021158) HAO2 (ENSPTIG00000021750) ENSPTIG00000000014 ZNF697 (ENSPTIG00000002818) PHGDH (ENSPTIG00000004897) HMGCS2 (ENSPTIG00000011965) REG4 (ENSPTIG00000013579) NOTCH2 (ENSPTIG00000014724) SEC22B (ENSPTIG00000017942) ENSPTIG00000018371 ENSPTIG00000018548 ##22 ENSPTIG00000019579 ##22 ENSPTIG00000012730 ##22 Panthera_a ANCESTRAL SPECIES 11 ENSGT00940000157498 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 lion MODERN SPECIES 8 TENT5C (ENSPLOG00000012735) ENSPLOG00000012701 GDAP2 (ENSPLOG00000012658) WDR3 (ENSPLOG00000012483) SPAG17 (ENSPLOG00000012093) TBX15 (ENSPLOG00000011860) WARS2 (ENSPLOG00000011821) HAO2 (ENSPLOG00000011694) ENSPLOG00000011592 ZNF697 (ENSPLOG00000011563) PHGDH (ENSPLOG00000011111) HMGCS2 (ENSPLOG00000010925) REG4 (ENSPLOG00000010847) NOTCH2 (ENSPLOG00000010680) SEC22B (ENSPLOG00000010603) PDE4DIP (ENSPLOG00000009882) ##22 ENSPLOG00000009717 RPTN (ENSPLOG00000009684) ENSPLOG00000009645 TCHHL1 (ENSPLOG00000009612) ENSPLOG00000009583 S100A10 (ENSPLOG00000009560) THEM4 (ENSPLOG00000009530) THEM5 (ENSPLOG00000009488) C2CD4D (ENSPLOG00000009475) RORC (ENSPLOG00000009361) LINGO4 (ENSPLOG00000009326) TDRKH (ENSPLOG00000009153) OAZ3 (ENSPLOG00000008964) MRPL9 (ENSPLOG00000008857) RIIAD1 (ENSPLOG00000008817) leopard DUPLICATION leopard MODERN SPECIES 31 TENT5C (ENSPPRG00000016270) GDAP2 (ENSPPRG00000000210) WDR3 (ENSPPRG00000022972) SPAG17 (ENSPPRG00000023948) TBX15 (ENSPPRG00000020309) WARS2 (ENSPPRG00000017754) HAO2 (ENSPPRG00000016364) ENSPPRG00000013982 ZNF697 (ENSPPRG00000013640) PHGDH (ENSPPRG00000012658) HMGCS2 (ENSPPRG00000010177) REG4 (ENSPPRG00000009446) NOTCH2 (ENSPPRG00000009066) SEC22B (ENSPPRG00000006928) ENSPPRG00000006640 ENSPPRG00000005578 ##22 ENSPPRG00000004060 ##22 leopard MODERN SPECIES 31 GDAP2 (ENSPPRG00000000210) WDR3 (ENSPPRG00000022972) SPAG17 (ENSPPRG00000023948) TBX15 (ENSPPRG00000020309) WARS2 (ENSPPRG00000017754) HAO2 (ENSPPRG00000016364) ENSPPRG00000013982 ZNF697 (ENSPPRG00000013640) PHGDH (ENSPPRG00000012658) HMGCS2 (ENSPPRG00000010177) REG4 (ENSPPRG00000009446) NOTCH2 (ENSPPRG00000009066) SEC22B (ENSPPRG00000006928) ENSPPRG00000006640 ENSPPRG00000005578 ##22 ENSPPRG00000004060 ##22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b.h.a ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Chiroptera ANCESTRAL SPECIES 20 ENSGT00940000155565 ENSGT00940000160798 ENSGT00920000149187 ENSGT00940000162382 ENSGT00940000155779.a.b ENSGT00940000162975 ENSGT00390000008726.h.b ENSGT00390000014107.a.b.z ENSGT00890000139566 ENSGT00940000160293 ENSGT00390000002471 ENSGT00940000163287 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.b ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a Megabat MODERN SPECIES 2523 PDE4DIP (ENSPVAG00000011090) ##22 ENSPVAG00000011089 Microchiroptera ANCESTRAL SPECIES 21 ENSGT00940000158338 ENSGT00940000155565 ENSGT00940000160798 ENSGT00920000149187 ENSGT00940000162382 ENSGT00940000155779.a.b ENSGT00940000162975 ENSGT00390000008726.h.b ENSGT00390000014107.a.b.z ENSGT00890000139566 ENSGT00940000160293 ENSGT00390000002471 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.b ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a Microbat MODERN SPECIES 1140 ENSMLUG00000028511 ENSMLUG00000028155 SPAG17 (ENSMLUG00000000696) ENSMLUG00000025065 TBX15 (ENSMLUG00000002958) WARS2 (ENSMLUG00000002965) HAO2 (ENSMLUG00000002972) ENSMLUG00000002982 ZNF697 (ENSMLUG00000014249) PHGDH (ENSMLUG00000002986) HMGCS2 (ENSMLUG00000003004) REG4 (ENSMLUG00000003014) ADAM30 (ENSMLUG00000005957) NOTCH2 (ENSMLUG00000003023) SEC22B (ENSMLUG00000025411) PDE4DIP (ENSMLUG00000012437) ##22 WDR3 (ENSMLUG00000003500) GDAP2 (ENSMLUG00000003494) TENT5C (ENSMLUG00000014236) MAN1A2 (ENSMLUG00000014231) VTCN1 (ENSMLUG00000013927) TRIM45 (ENSMLUG00000013923) TTF2 (ENSMLUG00000013908) CD101 (ENSMLUG00000007176) PTGFRN (ENSMLUG00000007160) ENSMLUG00000003193 IGSF3 (ENSMLUG00000003182) ENSMLUG00000022981 ATP1A1 (ENSMLUG00000005048) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 14 MAN1A2 (ENSRFEG00010018506) TENT5C (ENSRFEG00010018543) GDAP2 (ENSRFEG00010018562) WDR3 (ENSRFEG00010018610) SPAG17 (ENSRFEG00010018691) TBX15 (ENSRFEG00010019084) WARS2 (ENSRFEG00010019131) ENSRFEG00010019185 ZNF697 (ENSRFEG00010019306) ENSRFEG00010019349 HMGCS2 (ENSRFEG00010019427) REG4 (ENSRFEG00010019493) ENSRFEG00010010683 NOTCH2 (ENSRFEG00010010773) SEC22B (ENSRFEG00010010861) ENSRFEG00010010887 ##22 ENSRFEG00010011108 ##22 ENSRFEG00010015240 PRKAB2 (ENSRFEG00010015269) ENSRFEG00010015308 ENSRFEG00010015393 ENSRFEG00010015720 CHD1L (ENSRFEG00010015905) ENSRFEG00010017488 BCL9 (ENSRFEG00010017559) ACP6 (ENSRFEG00010017620) GJA8 (ENSRFEG00010017764) ENSRFEG00010017789 PDZK1 (ENSRFEG00010017870) CD160 (ENSRFEG00010017930) RNF115 (ENSRFEG00010018030) Greater horseshoe bat MODERN SPECIES 14 TENT5C (ENSRFEG00010018543) GDAP2 (ENSRFEG00010018562) WDR3 (ENSRFEG00010018610) SPAG17 (ENSRFEG00010018691) TBX15 (ENSRFEG00010019084) WARS2 (ENSRFEG00010019131) ENSRFEG00010019185 ZNF697 (ENSRFEG00010019306) ENSRFEG00010019349 HMGCS2 (ENSRFEG00010019427) REG4 (ENSRFEG00010019493) ENSRFEG00010010683 NOTCH2 (ENSRFEG00010010773) SEC22B (ENSRFEG00010010861) ENSRFEG00010010887 ##22 ENSRFEG00010011108 ##22 ENSRFEG00010015240 PRKAB2 (ENSRFEG00010015269) ENSRFEG00010015308 ENSRFEG00010015393 ENSRFEG00010015720 CHD1L (ENSRFEG00010015905) ENSRFEG00010017488 BCL9 (ENSRFEG00010017559) ACP6 (ENSRFEG00010017620) GJA8 (ENSRFEG00010017764) ENSRFEG00010017789 PDZK1 (ENSRFEG00010017870) CD160 (ENSRFEG00010017930) RNF115 (ENSRFEG00010018030) POLR3C (ENSRFEG00010018066) Equus ANCESTRAL SPECIES 3 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000163677.a.b.a.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00420000029746.e.b.h.a.a.b.b.b.b ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b.h.a.a.a ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.t.a.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Horse MODERN SPECIES 26 GDAP2 (ENSECAG00000014270) WDR3 (ENSECAG00000006575) SPAG17 (ENSECAG00000024156) TBX15 (ENSECAG00000023325) WARS2 (ENSECAG00000021622) HAO2 (ENSECAG00000059835) HSD3B2 (ENSECAG00000014483) ENSECAG00000030759 ZNF697 (ENSECAG00000031539) PHGDH (ENSECAG00000005228) HMGCS2 (ENSECAG00000000589) ENSECAG00000035708 ENSECAG00000042755 NOTCH2 (ENSECAG00000015266) SEC22B (ENSECAG00000014055) PDE4DIP (ENSECAG00000022891) ##22 ENSECAG00000036385 PRKAB2 (ENSECAG00000020796) FMO5 (ENSECAG00000019741) CHD1L (ENSECAG00000008915) ENSECAG00000038633 BCL9 (ENSECAG00000004159) ACP6 (ENSECAG00000022581) ENSECAG00000006074 GJA5 (ENSECAG00000022462) GJA8 (ENSECAG00000002537) ENSECAG00000013689 PDZK1 (ENSECAG00000011351) CD160 (ENSECAG00000010888) RNF115 (ENSECAG00000009030) POLR3C (ENSECAG00000023713) Donkey MODERN SPECIES 7 WDR3 (ENSEASG00005006393) SPAG17 (ENSEASG00005024790) TBX15 (ENSEASG00005006401) WARS2 (ENSEASG00005024683) HAO2 (ENSEASG00005006405) ENSEASG00005006408 ENSEASG00005037316 ZNF697 (ENSEASG00005006409) PHGDH (ENSEASG00005006410) HMGCS2 (ENSEASG00005006411) ENSEASG00005028726 ENSEASG00005033653 ENSEASG00005006415 ENSEASG00005006436 ENSEASG00005007009 ENSEASG00005007133 ##22 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183190.a.a.b ##22 Hedgehog MODERN SPECIES 7184 PDE4DIP (ENSEEUG00000005235) ##22 Common shrew MODERN SPECIES 5636 PDE4DIP (ENSSARG00000010008) ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153859.a ENSGT00390000013693 ENSGT01100000263543.a ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Tree shrew MODERN SPECIES 4166 ENSTBEG00000000998 PDE4DIP (ENSTBEG00000008280) ##22 Glires ANCESTRAL SPECIES ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Lagomorpha ANCESTRAL SPECIES 1 ENSGT00390000002799 ENSGT00940000157203 ENSGT00390000007258 ENSGT00950000182849.A.f.b ENSGT00390000000684 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT01100000263570.B ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000162954 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 Pika MODERN SPECIES 3698 PDE4DIP (ENSOPRG00000011046) ##22 ENSOPRG00000011030 Rabbit MODERN SPECIES 4 ENSOCUG00000003055 ENSOCUG00000030350 ENSOCUG00000024935 ENSOCUG00000002960 ENSOCUG00000030987 GJA8 (ENSOCUG00000002957) GJA5 (ENSOCUG00000016576) ACP6 (ENSOCUG00000000444) BCL9 (ENSOCUG00000012143) ENSOCUG00000027286 CHD1L (ENSOCUG00000009336) FMO5 (ENSOCUG00000009330) PRKAB2 (ENSOCUG00000009325) NOTCH2 (ENSOCUG00000016565) SEC22B (ENSOCUG00000026877) PDE4DIP (ENSOCUG00000011228) ##22 ADAM30 (ENSOCUG00000013791) ENSOCUG00000005773 HMGCS2 (ENSOCUG00000005767) PHGDH (ENSOCUG00000005759) ZNF697 (ENSOCUG00000014070) ENSOCUG00000004132 HAO2 (ENSOCUG00000017949) WARS2 (ENSOCUG00000012330) TBX15 (ENSOCUG00000012320) SPAG17 (ENSOCUG00000007586) WDR3 (ENSOCUG00000007572) GDAP2 (ENSOCUG00000007568) ENSOCUG00000027717 ENSOCUG00000026654 MAN1A2 (ENSOCUG00000012648) Rodentia ANCESTRAL SPECIES ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Rodentia_A ANCESTRAL SPECIES ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01090000260658 ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Hystricomorpha ANCESTRAL SPECIES 23 ENSGT00940000157498 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A.i ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a Naked mole-rat female MODERN SPECIES 10 FAM46C (ENSHGLG00000043157) ENSHGLG00000041120 ENSHGLG00000017537 WDR3 (ENSHGLG00000017936) SPAG17 (ENSHGLG00000009162) ENSHGLG00000032534 TBX15 (ENSHGLG00000050081) ENSHGLG00000038215 ENSHGLG00000042619 HSD3B1 (ENSHGLG00000033840) ENSHGLG00000006464 ENSHGLG00000042386 ENSHGLG00000049042 ENSHGLG00000015205 ENSHGLG00000016365 ENSHGLG00000004729 ##22 ENSHGLG00000001174 ENSHGLG00000033772 ENSHGLG00000005182 ENSHGLG00000039288 ENSHGLG00000037846 ENSHGLG00000038214 CHD1L (ENSHGLG00000008933) ENSHGLG00000018478 ENSHGLG00000048596 ENSHGLG00000034080 BCL9 (ENSHGLG00000013904) ENSHGLG00000004803 ENSHGLG00000043134 GJA5 (ENSHGLG00000037183) ENSHGLG00000006450 Hystricomorpha_a ANCESTRAL SPECIES 14 ENSGT00940000157498 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A.i ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a Hystricomorpha_b ANCESTRAL SPECIES 6 ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A.i ENSGT00390000018717.b.a.b ENSGT00940000155444.h ENSGT00940000155444.g.a ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a Long-tailed chinchilla MODERN SPECIES 275 NOTCH2 (ENSCLAG00000000609) SEC22B (ENSCLAG00000000410) PDE4DIP (ENSCLAG00000000622) ##22 PRKAB2 (ENSCLAG00000000963) FMO5 (ENSCLAG00000000948) CHD1L (ENSCLAG00000000880) ENSCLAG00000000754 ENSCLAG00000000734 BCL9 (ENSCLAG00000000718) ACP6 (ENSCLAG00000000662) ENSCLAG00000000638 GJA5 (ENSCLAG00000000616) GJA8 (ENSCLAG00000017420) ENSCLAG00000000463 PDZK1 (ENSCLAG00000000212) RNF115 (ENSCLAG00000000561) POLR3C (ENSCLAG00000001652) NUDT17 (ENSCLAG00000001048) Degu MODERN SPECIES 298 ENSODEG00000001230 ENSODEG00000001240 HAO2 (ENSODEG00000001256) ENSODEG00000001440 ENSODEG00000001448 ENSODEG00000018670 ENSODEG00000001464 ZNF697 (ENSODEG00000001481) PHGDH (ENSODEG00000001506) HMGCS2 (ENSODEG00000000553) REG4 (ENSODEG00000000629) ENSODEG00000000642 ENSODEG00000000653 NOTCH2 (ENSODEG00000000797) ENSODEG00000001721 PDE4DIP (ENSODEG00000001415) ##22 PRKAB2 (ENSODEG00000001559) FMO5 (ENSODEG00000001670) CHD1L (ENSODEG00000002494) Guinea pig MODERN SPECIES 2 TENT5C (ENSCPOG00000035573) GDAP2 (ENSCPOG00000012599) WDR3 (ENSCPOG00000011305) SPAG17 (ENSCPOG00000011317) TBX15 (ENSCPOG00000000615) WARS2 (ENSCPOG00000000616) ENSCPOG00000001451 ENSCPOG00000033437 ENSCPOG00000008386 ZNF697 (ENSCPOG00000033846) PHGDH (ENSCPOG00000006732) HMGCS2 (ENSCPOG00000006339) REG4 (ENSCPOG00000025637) NOTCH2 (ENSCPOG00000015738) SEC22B (ENSCPOG00000031768) ENSCPOG00000007934 ##22 PRKAB2 (ENSCPOG00000033400) Fmo5 (ENSCPOG00000013868) CHD1L (ENSCPOG00000009000) ENSCPOG00000022795 BCL9 (ENSCPOG00000012202) ACP6 (ENSCPOG00000012209) GJA5 (ENSCPOG00000008219) GJA8 (ENSCPOG00000019781) ENSCPOG00000008390 PDZK1 (ENSCPOG00000005364) RNF115 (ENSCPOG00000024517) POLR3C (ENSCPOG00000004654) PIAS3 (ENSCPOG00000002771) ANKRD35 (ENSCPOG00000002766) ITGA10 (ENSCPOG00000002756) Sciuridae ANCESTRAL SPECIES ENSGT00940000157203 ENSGT00390000007258 ENSGT00950000182849.A.f.b ENSGT00390000000684 ENSGT01050000244864.D ENSGT01090000260658 ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493.m ENSGT00940000159284 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000155444.k ENSGT00940000155444.l ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 Eurasian red squirrel MODERN SPECIES ENSSVLG00005003882 GJA8 (ENSSVLG00005003866) GJA5 (ENSSVLG00005003855) ACP6 (ENSSVLG00005003822) BCL9 (ENSSVLG00005003796) ENSSVLG00005003777 ENSSVLG00005003766 ENSSVLG00005003761 ENSSVLG00005003748 CHD1L (ENSSVLG00005003586) ENSSVLG00005003488 ENSSVLG00005003464 ADAM30 (ENSSVLG00005003444) NOTCH2 (ENSSVLG00005003351) SEC22B (ENSSVLG00005003320) PDE4DIP (ENSSVLG00005002435) ##22 ENSSVLG00005002128 REG4 (ENSSVLG00005002100) HMGCS2 (ENSSVLG00005002058) PHGDH (ENSSVLG00005002011) ZNF697 (ENSSVLG00005001991) ENSSVLG00005001978 ENSSVLG00005001914 ENSSVLG00005001762 ENSSVLG00005001708 HAO2 (ENSSVLG00005001685) WARS2 (ENSSVLG00005001663) TBX15 (ENSSVLG00005001632) ENSSVLG00005001591 WDR3 (ENSSVLG00005001572) ENSSVLG00005001561 Marmotini ANCESTRAL SPECIES 150 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Marmotini_b ANCESTRAL SPECIES 326 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Arctic ground squirrel MODERN SPECIES 765 ENSUPAG00010003156 PDE4DIP (ENSUPAG00010003176) ##22 Squirrel MODERN SPECIES 471 ENSSTOG00000030179 NOTCH2 (ENSSTOG00000004634) SEC22B (ENSSTOG00000023607) ENSSTOG00000023822 ##22 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 100 WDR47 (ENSMMMG00000020303) CLCC1 (ENSMMMG00000020289) GPSM2 (ENSMMMG00000020281) ENSMMMG00000020273 STXBP3 (ENSMMMG00000020247) FNDC7 (ENSMMMG00000020200) ENSMMMG00000020187 HENMT1 (ENSMMMG00000020160) PRKAB2 (ENSMMMG00000020148) FMO5 (ENSMMMG00000020138) ENSMMMG00000020133 ENSMMMG00000020131 ADAM30 (ENSMMMG00000020130) NOTCH2 (ENSMMMG00000019606) SEC22B (ENSMMMG00000019593) ENSMMMG00000019587 ##22 ENSMMMG00000019553 ##22 ENSMMMG00000019548 ##22 ENSMMMG00000019542 ##22 ENSMMMG00000019535 ##22 Alpin marmot DUPLICATION Alpin marmot DUPLICATION Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 100 STXBP3 (ENSMMMG00000020247) FNDC7 (ENSMMMG00000020200) ENSMMMG00000020187 HENMT1 (ENSMMMG00000020160) PRKAB2 (ENSMMMG00000020148) FMO5 (ENSMMMG00000020138) ENSMMMG00000020133 ENSMMMG00000020131 ADAM30 (ENSMMMG00000020130) NOTCH2 (ENSMMMG00000019606) SEC22B (ENSMMMG00000019593) ENSMMMG00000019587 ##22 ENSMMMG00000019553 ##22 ENSMMMG00000019548 ##22 ENSMMMG00000019542 ##22 ENSMMMG00000019535 ##22 Alpin marmot MODERN SPECIES 100 CLCC1 (ENSMMMG00000020289) GPSM2 (ENSMMMG00000020281) ENSMMMG00000020273 STXBP3 (ENSMMMG00000020247) FNDC7 (ENSMMMG00000020200) ENSMMMG00000020187 HENMT1 (ENSMMMG00000020160) PRKAB2 (ENSMMMG00000020148) FMO5 (ENSMMMG00000020138) ENSMMMG00000020133 ENSMMMG00000020131 ADAM30 (ENSMMMG00000020130) NOTCH2 (ENSMMMG00000019606) SEC22B (ENSMMMG00000019593) ENSMMMG00000019587 ##22 ENSMMMG00000019553 ##22 ENSMMMG00000019548 ##22 ENSMMMG00000019542 ##22 ENSMMMG00000019535 ##22 Alpin marmot MODERN SPECIES 100 ENSMMMG00000020273 STXBP3 (ENSMMMG00000020247) FNDC7 (ENSMMMG00000020200) ENSMMMG00000020187 HENMT1 (ENSMMMG00000020160) PRKAB2 (ENSMMMG00000020148) FMO5 (ENSMMMG00000020138) ENSMMMG00000020133 ENSMMMG00000020131 ADAM30 (ENSMMMG00000020130) NOTCH2 (ENSMMMG00000019606) SEC22B (ENSMMMG00000019593) ENSMMMG00000019587 ##22 ENSMMMG00000019553 ##22 ENSMMMG00000019548 ##22 ENSMMMG00000019542 ##22 ENSMMMG00000019535 ##22 Alpin marmot MODERN SPECIES 100 GPSM2 (ENSMMMG00000020281) ENSMMMG00000020273 STXBP3 (ENSMMMG00000020247) FNDC7 (ENSMMMG00000020200) ENSMMMG00000020187 HENMT1 (ENSMMMG00000020160) PRKAB2 (ENSMMMG00000020148) FMO5 (ENSMMMG00000020138) ENSMMMG00000020133 ENSMMMG00000020131 ADAM30 (ENSMMMG00000020130) NOTCH2 (ENSMMMG00000019606) SEC22B (ENSMMMG00000019593) ENSMMMG00000019587 ##22 ENSMMMG00000019553 ##22 ENSMMMG00000019548 ##22 ENSMMMG00000019542 ##22 ENSMMMG00000019535 ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Kangaroo rat MODERN SPECIES 358 Syde2 (ENSDORG00000005799) 2410004B18Rik (ENSDORG00000012509) ENSDORG00000028780 Ddah1 (ENSDORG00000013259) Ccn1 (ENSDORG00000005602) Znhit6 (ENSDORG00000029755) ENSDORG00000015616 Odf2l (ENSDORG00000009195) Clca2 (ENSDORG00000009200) Clca1 (ENSDORG00000008434) Phgdh (ENSDORG00000008531) Hmgcs2 (ENSDORG00000008532) Reg4 (ENSDORG00000009271) Notch2 (ENSDORG00000001171) Sec22b (ENSDORG00000023311) ENSDORG00000024515 ##22 Prkab2 (ENSDORG00000027473) ENSDORG00000000256 ENSDORG00000001332 Chd1l (ENSDORG00000013555) Bcl9 (ENSDORG00000003296) ENSDORG00000016000 Gja8 (ENSDORG00000000930) Gpr89 (ENSDORG00000023702) ENSDORG00000008399 Rnf115 (ENSDORG00000007839) Polr3c (ENSDORG00000013430) Pias3 (ENSDORG00000013427) Ankrd35 (ENSDORG00000001803) Itga10 (ENSDORG00000008520) Pex11b (ENSDORG00000023422) Myomorpha ANCESTRAL SPECIES 12 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a ENSGT00940000155444.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Lesser Egyptian jerboa MODERN SPECIES 69 S1pr1 (ENSJJAG00000010551) ENSJJAG00000019910 Dph5 (ENSJJAG00000008927) Slc30a7 (ENSJJAG00000002926) Extl2 (ENSJJAG00000014735) Vcam1 (ENSJJAG00000015695) Gpr88 (ENSJJAG00000012613) Cdc14a (ENSJJAG00000022290) Rtca (ENSJJAG00000016178) Zfp697 (ENSJJAG00000017598) Phgdh (ENSJJAG00000014448) ENSJJAG00000017734 Reg4 (ENSJJAG00000000579) Notch2 (ENSJJAG00000013302) ENSJJAG00000010827 ENSJJAG00000019713 ##22 Prkab2 (ENSJJAG00000023668) Fmo5 (ENSJJAG00000018621) ENSJJAG00000023016 Bcl9 (ENSJJAG00000020720) ENSJJAG00000021945 Gja5 (ENSJJAG00000009810) Gja8 (ENSJJAG00000013389) Gpr89 (ENSJJAG00000020361) ENSJJAG00000000868 Rnf115 (ENSJJAG00000007841) Polr3c (ENSJJAG00000011447) Nudt17 (ENSJJAG00000018335) Pias3 (ENSJJAG00000020778) Ankrd35 (ENSJJAG00000001517) Itga10 (ENSJJAG00000023352) Muroidea ANCESTRAL SPECIES 6 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a ENSGT00940000155444.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Upper Galilee mountains blind mole rat MODERN SPECIES 713 ENSNGAG00000019968 Zfp697 (ENSNGAG00000019367) Phgdh (ENSNGAG00000010766) Hmgcs2 (ENSNGAG00000010114) Reg4 (ENSNGAG00000007946) Notch2 (ENSNGAG00000000332) Sec22b (ENSNGAG00000018424) Pde4dip (ENSNGAG00000011730) ##22 Prkab2 (ENSNGAG00000011301) Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a ENSGT00940000155444.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Cricetidae ANCESTRAL SPECIES 6 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a ENSGT00940000155444.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a ENSGT00940000155444.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Northern American deer mouse MODERN SPECIES 19 Tbx15 (ENSPEMG00000026645) ENSPEMG00000018152 ENSPEMG00000024697 ENSPEMG00000027699 ENSPEMG00000025075 ENSPEMG00000027797 Hao2 (ENSPEMG00000000115) ENSPEMG00000026521 Zfp697 (ENSPEMG00000025468) Phgdh (ENSPEMG00000004948) Hmgcs2 (ENSPEMG00000004811) Reg4 (ENSPEMG00000014392) Adam30 (ENSPEMG00000026187) Notch2 (ENSPEMG00000009366) Sec22b (ENSPEMG00000028857) Pde4dip (ENSPEMG00000014907) ##22 ENSPEMG00000028867 Prkab2 (ENSPEMG00000025683) Fmo5 (ENSPEMG00000010918) Chd1l (ENSPEMG00000013528) ENSPEMG00000025256 ENSPEMG00000024540 Bcl9 (ENSPEMG00000018207) Acp6 (ENSPEMG00000008867) Gja5 (ENSPEMG00000030601) ENSPEMG00000026655 Gja8 (ENSPEMG00000006825) Gpr89 (ENSPEMG00000000972) Cd160 (ENSPEMG00000013087) Rnf115 (ENSPEMG00000017239) Polr3c (ENSPEMG00000016322) Prairie vole MODERN SPECIES 8 Tent5c (ENSMOCG00000018840) Gdap2 (ENSMOCG00000011700) Wdr3 (ENSMOCG00000014361) Spag17 (ENSMOCG00000001590) ENSMOCG00000009935 Tbx15 (ENSMOCG00000012596) Wars2 (ENSMOCG00000005144) ENSMOCG00000020989 ENSMOCG00000020634 ENSMOCG00000019719 Zfp697 (ENSMOCG00000021360) ENSMOCG00000019393 Hmgcs2 (ENSMOCG00000012622) Notch2 (ENSMOCG00000017629) Sec22b (ENSMOCG00000016265) Pde4dip (ENSMOCG00000015898) ##22 Prkab2 (ENSMOCG00000017982) Fmo5 (ENSMOCG00000016787) Chd1l (ENSMOCG00000006305) Bcl9 (ENSMOCG00000002460) Acp6 (ENSMOCG00000021116) Gja5 (ENSMOCG00000019445) Gja8 (ENSMOCG00000009290) Gpr89 (ENSMOCG00000005315) Pdzk1 (ENSMOCG00000004696) Cd160 (ENSMOCG00000021710) Rnf115 (ENSMOCG00000019619) Polr3c (ENSMOCG00000000997) Nudt17 (ENSMOCG00000001212) Pias3 (ENSMOCG00000019927) Ankrd35 (ENSMOCG00000012567) Cricetinae ANCESTRAL SPECIES 12 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a ENSGT00940000155444.b ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Chinese hamster chok1gshd MODERN SPECIES 66 Wdr3 (ENSCGRG00001019544) Spag17 (ENSCGRG00001013560) Tbx15 (ENSCGRG00001024224) Wars2 (ENSCGRG00001018718) Hao2 (ENSCGRG00001020203) ENSCGRG00001023014 ENSCGRG00001013270 ENSCGRG00001019902 Zfp697 (ENSCGRG00001008232) ENSCGRG00001015588 Hmgcs2 (ENSCGRG00001020820) Reg4 (ENSCGRG00001000234) Adam30 (ENSCGRG00001009068) Notch2 (ENSCGRG00001014398) Sec22b (ENSCGRG00001021908) Pde4dip (ENSCGRG00001021057) ##22 Prkab2 (ENSCGRG00001018736) Fmo5 (ENSCGRG00001013887) Chd1l (ENSCGRG00001021624) ENSCGRG00001009212 ENSCGRG00001003668 ENSCGRG00001012037 ENSCGRG00001015976 Bcl9 (ENSCGRG00001021508) Acp6 (ENSCGRG00001024205) Gja5 (ENSCGRG00001005163) Gja8 (ENSCGRG00001004099) Gpr89 (ENSCGRG00001010733) ENSCGRG00001005229 Pdzk1 (ENSCGRG00001017392) Cd160 (ENSCGRG00001006376) Golden Hamster MODERN SPECIES 782 ENSMAUG00000013562 Zfp697 (ENSMAUG00000014216) Phgdh (ENSMAUG00000014304) Hmgcs2 (ENSMAUG00000019983) Reg4 (ENSMAUG00000006229) Notch2 (ENSMAUG00000016544) Sec22b (ENSMAUG00000016258) Pde4dip (ENSMAUG00000002671) ##22 Prkab2 (ENSMAUG00000015207) Fmo5 (ENSMAUG00000021078) ENSMAUG00000009168 ENSMAUG00000004712 Or13l2 (ENSMAUG00000014748) Bcl9 (ENSMAUG00000020639) Acp6 (ENSMAUG00000009766) Gja5 (ENSMAUG00000016597) Gja8 (ENSMAUG00000004556) Gpr89 (ENSMAUG00000010582) Pdzk1 (ENSMAUG00000009842) Cd160 (ENSMAUG00000020080) Rnf115 (ENSMAUG00000010619) ENSMAUG00000001454 ENSMAUG00000018348 Murinae ANCESTRAL SPECIES 5 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a ENSGT00940000155444.b ENSGT00820000127150 ENSGT00940000155863.eb.a ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Mus ANCESTRAL SPECIES 7 ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a.g ENSGT00940000155444.a.h.b ENSGT00940000155444.a.h.a ENSGT00940000155444.b ENSGT00820000127150 ENSGT00940000155863.eb.a ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Mus_A ANCESTRAL SPECIES 9 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a.g ENSGT00940000155444.a.h.b ENSGT00940000155444.a.h.a.a ENSGT00940000155444.a.h.a.b ENSGT00940000155444.b ENSGT00820000127150 ENSGT00940000155863.eb.a ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.p ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a Mus_B ANCESTRAL SPECIES 8 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a.g ENSGT00940000155444.a.h.b ENSGT00940000155444.a.h.a.a ENSGT00940000155444.a.h.a.b ENSGT00940000155444.b.e ENSGT00820000127150 ENSGT00940000155863.eb.a ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.o ENSGT01100000263570.B.p ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 Mus_C ANCESTRAL SPECIES 6 ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444.a.g ENSGT00940000155444.a.h.a.a ENSGT00940000155444.a.h.a.b ENSGT00940000155444.b.e ENSGT00820000127150 ENSGT00940000155863.eb.a ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.o ENSGT01100000263570.B.p ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 spretus MODERN SPECIES 12 Hao2 (MGP_SPRETEiJ_G0026367) Hsd3b1 (MGP_SPRETEiJ_G0026366) Hsd3b3 (MGP_SPRETEiJ_G0026365) Hsd3b2 (MGP_SPRETEiJ_G0026363) MGP_SPRETEiJ_G0026361 MGP_SPRETEiJ_G0026362 MGP_SPRETEiJ_G0026360 MGP_SPRETEiJ_G0026359 Zfp697 (MGP_SPRETEiJ_G0026358) MGP_SPRETEiJ_G0026357 Hmgcs2 (MGP_SPRETEiJ_G0026356) Reg4 (MGP_SPRETEiJ_G0026355) Adam30 (MGP_SPRETEiJ_G0026354) Notch2 (MGP_SPRETEiJ_G0026353) Sec22b (MGP_SPRETEiJ_G0026352) Pde4dip (MGP_SPRETEiJ_G0026351) ##22 MGP_SPRETEiJ_G0026350 Prkab2 (MGP_SPRETEiJ_G0026349) Fmo5 (MGP_SPRETEiJ_G0026348) Chd1l (MGP_SPRETEiJ_G0026347) Or13l2 (MGP_SPRETEiJ_G0026346) Bcl9 (MGP_SPRETEiJ_G0026345) Acp6 (MGP_SPRETEiJ_G0026344) Gja8 (MGP_SPRETEiJ_G0026343) Gja5 (MGP_SPRETEiJ_G0026342) Gpr89 (MGP_SPRETEiJ_G0026341) Pdzk1 (MGP_SPRETEiJ_G0026340) Cd160 (MGP_SPRETEiJ_G0026339) Rnf115 (MGP_SPRETEiJ_G0026338) Polr3c (MGP_SPRETEiJ_G0026337) Nudt17 (MGP_SPRETEiJ_G0026336) Steppe mouse MODERN SPECIES 3080 Zfp697 (ENSMSIG00000022782) ENSMSIG00000022744 Hmgcs2 (ENSMSIG00000022715) Reg4 (ENSMSIG00000022695) Adam30 (ENSMSIG00000022683) Notch2 (ENSMSIG00000022612) ENSMSIG00000022608 Sec22b (ENSMSIG00000022601) Pde4dip (ENSMSIG00000022346) ##22 ENSMSIG00000022326 Prkab2 (ENSMSIG00000022299) Fmo5 (ENSMSIG00000022254) Chd1l (ENSMSIG00000022150) ENSMSIG00000022145 Or13l2 (ENSMSIG00000022136) Bcl9 (ENSMSIG00000022077) Acp6 (ENSMSIG00000022056) Gja5 (ENSMSIG00000022039) Gja8 (ENSMSIG00000022025) Gpr89 (ENSMSIG00000021948) Pdzk1 (ENSMSIG00000021897) Cd160 (ENSMSIG00000021872) ENSMSIG00000021857 Polr3c (ENSMSIG00000021829) Mouse MODERN SPECIES 12 Hsd3b1 (ENSMUSG00000027871) Hsd3b6 (ENSMUSG00000027869) Hsd3b3 (ENSMUSG00000062410) Hsd3b2 (ENSMUSG00000063730) Hsd3b5 (ENSMUSG00000038092) Hsd3b8 (ENSMUSG00000095388) Hsd3b4 (ENSMUSG00000095143) Hsd3b9 (ENSMUSG00000090817) Zfp697 (ENSMUSG00000050064) Phgdh (ENSMUSG00000053398) Hmgcs2 (ENSMUSG00000027875) Reg4 (ENSMUSG00000027876) Adam30 (ENSMUSG00000043468) Notch2 (ENSMUSG00000027878) Sec22b (ENSMUSG00000027879) Pde4dip (ENSMUSG00000038170) ##22 Prkab2 (ENSMUSG00000038205) Fmo5 (ENSMUSG00000028088) Chd1l (ENSMUSG00000028089) Or13l2 (ENSMUSG00000051392) Bcl9 (ENSMUSG00000038256) Acp6 (ENSMUSG00000028093) Gja8 (ENSMUSG00000049908) Gja5 (ENSMUSG00000057123) Gpr89 (ENSMUSG00000028096) Pdzk1 (ENSMUSG00000038298) Cd160 (ENSMUSG00000038304) Rnf115 (ENSMUSG00000028098) Polr3c (ENSMUSG00000028099) Nudt17 (ENSMUSG00000028100) Pias3 (ENSMUSG00000028101) Ryukyu mouse MODERN SPECIES 12 Wdr3 (MGP_CAROLIEiJ_G0025421) Spag17 (MGP_CAROLIEiJ_G0025420) Tbx15 (MGP_CAROLIEiJ_G0025419) MGP_CAROLIEiJ_G0025418 Hao2 (MGP_CAROLIEiJ_G0025417) Hsd3b1 (MGP_CAROLIEiJ_G0025416) MGP_CAROLIEiJ_G0025414 MGP_CAROLIEiJ_G0025413 Zfp697 (MGP_CAROLIEiJ_G0025412) MGP_CAROLIEiJ_G0025411 Hmgcs2 (MGP_CAROLIEiJ_G0025410) Reg4 (MGP_CAROLIEiJ_G0025409) Adam30 (MGP_CAROLIEiJ_G0025408) Notch2 (MGP_CAROLIEiJ_G0025407) Sec22b (MGP_CAROLIEiJ_G0025406) Pde4dip (MGP_CAROLIEiJ_G0025405) ##22 MGP_CAROLIEiJ_G0025404 MGP_CAROLIEiJ_G0025403 Fmo5 (MGP_CAROLIEiJ_G0025402) Chd1l (MGP_CAROLIEiJ_G0025401) Or13l2 (MGP_CAROLIEiJ_G0025400) MGP_CAROLIEiJ_G0025399 Bcl9 (MGP_CAROLIEiJ_G0025398) Acp6 (MGP_CAROLIEiJ_G0025397) Gja8 (MGP_CAROLIEiJ_G0025396) Gja5 (MGP_CAROLIEiJ_G0025395) Gpr89 (MGP_CAROLIEiJ_G0025394) Pdzk1 (MGP_CAROLIEiJ_G0025393) Cd160 (MGP_CAROLIEiJ_G0025392) Rnf115 (MGP_CAROLIEiJ_G0025391) Polr3c (MGP_CAROLIEiJ_G0025390) Shrew mouse MODERN SPECIES 17 Spag17 (MGP_PahariEiJ_G0026864) Tbx15 (MGP_PahariEiJ_G0026863) Wars2 (MGP_PahariEiJ_G0026862) Hao2 (MGP_PahariEiJ_G0026861) Hsd3b1 (MGP_PahariEiJ_G0026860) MGP_PahariEiJ_G0026859 MGP_PahariEiJ_G0026858 MGP_PahariEiJ_G0026857 Zfp697 (MGP_PahariEiJ_G0026856) Phgdh (MGP_PahariEiJ_G0026855) Hmgcs2 (MGP_PahariEiJ_G0026854) Reg4 (MGP_PahariEiJ_G0026853) MGP_PahariEiJ_G0026852 Notch2 (MGP_PahariEiJ_G0026851) Sec22b (MGP_PahariEiJ_G0026850) Pde4dip (MGP_PahariEiJ_G0026849) ##22 MGP_PahariEiJ_G0026848 MGP_PahariEiJ_G0026847 Fmo5 (MGP_PahariEiJ_G0026846) Chd1l (MGP_PahariEiJ_G0026845) Or13l2 (MGP_PahariEiJ_G0026844) Bcl9 (MGP_PahariEiJ_G0026843) Acp6 (MGP_PahariEiJ_G0026842) Gja8 (MGP_PahariEiJ_G0026841) Gja5 (MGP_PahariEiJ_G0026840) Gpr89 (MGP_PahariEiJ_G0026839) Pdzk1 (MGP_PahariEiJ_G0026838) Cd160 (MGP_PahariEiJ_G0026837) Rnf115 (MGP_PahariEiJ_G0026836) Polr3c (MGP_PahariEiJ_G0026835) Nudt17 (MGP_PahariEiJ_G0026834) Rat MODERN SPECIES 11 LOC120100604 (ENSRNOG00000065447) Hao2 (ENSRNOG00000019470) AABR07012635.1 (ENSRNOG00000053190) Hsd3b1 (ENSRNOG00000070622) Hsd3b3 (ENSRNOG00000063905) Hsd3b2 (ENSRNOG00000019441) Hsd3b5-ps1 (ENSRNOG00000070670) Hsd3b5 (ENSRNOG00000019417) Zfp697 (ENSRNOG00000065357) Phgdh (ENSRNOG00000019328) Hmgcs2 (ENSRNOG00000019120) Reg4 (ENSRNOG00000019046) Adam30 (ENSRNOG00000019044) Notch2 (ENSRNOG00000018835) Sec22b (ENSRNOG00000018673) Pde4dip (ENSRNOG00000018220) ##22 Gm17651 (ENSRNOG00000062826) Prkab2 (ENSRNOG00000018166) Fmo5 (ENSRNOG00000018076) Chd1l (ENSRNOG00000017669) Or13l2 (ENSRNOG00000017664) Rpl38-ps8 (ENSRNOG00000030747) Bcl9 (ENSRNOG00000017516) Acp6 (ENSRNOG00000017494) Rhno1-ps2 (ENSRNOG00000067361) ENSRNOG00000068655 Gja5 (ENSRNOG00000017484) Gja8 (ENSRNOG00000046703) Gpr89b (ENSRNOG00000000095) Pdzk1 (ENSRNOG00000000096) Cd160 (ENSRNOG00000000097) Primates ANCESTRAL SPECIES 4 ENSGT00940000153859.a ENSGT00390000013693 ENSGT01100000263543.a ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a Strepsirrhini ANCESTRAL SPECIES ENSGT00390000002799 ENSGT00940000157203 ENSGT00390000007258 ENSGT00950000182849.A.f.b ENSGT00390000000684 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000161374 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 Bushbaby MODERN SPECIES 188 POLR3C (ENSOGAG00000000209) RNF115 (ENSOGAG00000000210) CD160 (ENSOGAG00000027280) PDZK1 (ENSOGAG00000028874) ENSOGAG00000003605 GJA8 (ENSOGAG00000024601) GJA5 (ENSOGAG00000024557) ACP6 (ENSOGAG00000003598) BCL9 (ENSOGAG00000003597) CHD1L (ENSOGAG00000008775) FMO5 (ENSOGAG00000012809) PRKAB2 (ENSOGAG00000012807) ADAM30 (ENSOGAG00000029766) NOTCH2 (ENSOGAG00000015075) SEC22B (ENSOGAG00000034815) PDE4DIP (ENSOGAG00000015829) ##22 HMGCS2 (ENSOGAG00000000816) PHGDH (ENSOGAG00000002736) ZNF697 (ENSOGAG00000031708) ENSOGAG00000032658 HAO2 (ENSOGAG00000015232) WARS2 (ENSOGAG00000007285) TBX15 (ENSOGAG00000007282) SPAG17 (ENSOGAG00000007408) WDR3 (ENSOGAG00000007399) GDAP2 (ENSOGAG00000007395) TENT5C (ENSOGAG00000033246) ENSOGAG00000028154 MAN1A2 (ENSOGAG00000003687) VTCN1 (ENSOGAG00000006636) TRIM45 (ENSOGAG00000006634) Lemuriformes ANCESTRAL SPECIES ENSGT00390000002799 ENSGT00940000157203 ENSGT00390000007258 ENSGT00950000182849.A.f.b ENSGT00390000000684 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000161374 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 ENSGT00940000154334.k Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 11 PIAS3 (ENSMICG00000033732) NUDT17 (ENSMICG00000031177) POLR3C (ENSMICG00000034253) RNF115 (ENSMICG00000044821) CD160 (ENSMICG00000038733) ENSMICG00000028695 PDZK1 (ENSMICG00000038001) ENSMICG00000005562 ACP6 (ENSMICG00000005556) BCL9 (ENSMICG00000038350) CHD1L (ENSMICG00000002497) FMO5 (ENSMICG00000002485) PRKAB2 (ENSMICG00000002483) NOTCH2 (ENSMICG00000016769) SEC22B (ENSMICG00000027609) ENSMICG00000041490 ##22 PDE4DIP (ENSMICG00000006770) ##22 REG4 (ENSMICG00000004480) HMGCS2 (ENSMICG00000004472) PHGDH (ENSMICG00000004462) ZNF697 (ENSMICG00000046814) ENSMICG00000027917 HAO2 (ENSMICG00000030575) WARS2 (ENSMICG00000026450) TBX15 (ENSMICG00000048122) SPAG17 (ENSMICG00000001795) WDR3 (ENSMICG00000001783) GDAP2 (ENSMICG00000001775) TENT5C (ENSMICG00000001773) ENSMICG00000009764 VTCN1 (ENSMICG00000009755) Mouse lemur MODERN SPECIES 11 NUDT17 (ENSMICG00000031177) POLR3C (ENSMICG00000034253) RNF115 (ENSMICG00000044821) CD160 (ENSMICG00000038733) ENSMICG00000028695 PDZK1 (ENSMICG00000038001) ENSMICG00000005562 ACP6 (ENSMICG00000005556) BCL9 (ENSMICG00000038350) CHD1L (ENSMICG00000002497) FMO5 (ENSMICG00000002485) PRKAB2 (ENSMICG00000002483) NOTCH2 (ENSMICG00000016769) SEC22B (ENSMICG00000027609) ENSMICG00000041490 ##22 PDE4DIP (ENSMICG00000006770) ##22 REG4 (ENSMICG00000004480) HMGCS2 (ENSMICG00000004472) PHGDH (ENSMICG00000004462) ZNF697 (ENSMICG00000046814) ENSMICG00000027917 HAO2 (ENSMICG00000030575) WARS2 (ENSMICG00000026450) TBX15 (ENSMICG00000048122) SPAG17 (ENSMICG00000001795) WDR3 (ENSMICG00000001783) GDAP2 (ENSMICG00000001775) TENT5C (ENSMICG00000001773) ENSMICG00000009764 VTCN1 (ENSMICG00000009755) TRIM45 (ENSMICG00000009751) Lemuriformes_a ANCESTRAL SPECIES 31 ENSGT00390000002799 ENSGT00940000157203 ENSGT00390000007258 ENSGT00950000182849.A.f.b ENSGT00390000000684 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000161374 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 ENSGT00940000154334.k Greater bamboo lemur MODERN SPECIES 511 ENSPSMG00000016302 PDE4DIP (ENSPSMG00000016236) ##22 REG4 (ENSPSMG00000015920) HMGCS2 (ENSPSMG00000015892) ENSPSMG00000015859 PHGDH (ENSPSMG00000015815) ZNF697 (ENSPSMG00000015646) ENSPSMG00000015637 HAO2 (ENSPSMG00000015617) WARS2 (ENSPSMG00000015600) TBX15 (ENSPSMG00000015582) SPAG17 (ENSPSMG00000015573) WDR3 (ENSPSMG00000015414) GDAP2 (ENSPSMG00000015264) TENT5C (ENSPSMG00000015247) ENSPSMG00000015236 MAN1A2 (ENSPSMG00000015225) Coquerels sifaka MODERN SPECIES 285 PDZK1 (ENSPCOG00000017661) ENSPCOG00000026855 GJA8 (ENSPCOG00000017237) ENSPCOG00000018085 ACP6 (ENSPCOG00000000088) BCL9 (ENSPCOG00000016470) ENSPCOG00000027985 ENSPCOG00000018579 CHD1L (ENSPCOG00000023924) FMO5 (ENSPCOG00000021948) PRKAB2 (ENSPCOG00000014742) NOTCH2 (ENSPCOG00000009637) SEC22B (ENSPCOG00000014218) ENSPCOG00000011997 ENSPCOG00000014195 PDE4DIP (ENSPCOG00000015883) ##22 REG4 (ENSPCOG00000018461) HMGCS2 (ENSPCOG00000027434) ENSPCOG00000025200 PHGDH (ENSPCOG00000015198) ZNF697 (ENSPCOG00000022280) ENSPCOG00000016500 HAO2 (ENSPCOG00000022355) WARS2 (ENSPCOG00000026406) TBX15 (ENSPCOG00000000115) SPAG17 (ENSPCOG00000023855) ENSPCOG00000011579 GDAP2 (ENSPCOG00000005524) Haplorrhini ANCESTRAL SPECIES 1 ENSGT00940000153859.a ENSGT00390000013693 ENSGT01100000263543.a ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a Tarsier MODERN SPECIES 2171 ENSTSYG00000025564 ENSTSYG00000005831 ##22 Simiiformes ANCESTRAL SPECIES 3 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000161374 ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a Platyrrhini ANCESTRAL SPECIES ENSGT00940000158856 ENSGT00940000156336 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000161374.c ENSGT00940000161374.d ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000167308 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Mas night monkey MODERN SPECIES 775 SPAG17 (ENSANAG00000023109) TBX15 (ENSANAG00000031356) WARS2 (ENSANAG00000023161) HAO2 (ENSANAG00000027767) ENSANAG00000024099 ENSANAG00000027651 ZNF697 (ENSANAG00000035327) PHGDH (ENSANAG00000020037) HMGCS2 (ENSANAG00000028816) REG4 (ENSANAG00000034580) ENSANAG00000029050 ENSANAG00000029304 NOTCH2 (ENSANAG00000020885) SEC22B (ENSANAG00000022757) ENSANAG00000024321 PDE4DIP (ENSANAG00000031498) ##22 ENSANAG00000028435 Cebidae ANCESTRAL SPECIES 60 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Cebidae_a ANCESTRAL SPECIES 160 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Capuchin MODERN SPECIES 32 PDE4DIP (ENSCCAG00000037292) ##22 ENSCCAG00000030990 ENSCCAG00000028376 ENSCCAG00000028299 HAO2 (ENSCCAG00000023792) ENSCCAG00000005716 WARS2 (ENSCCAG00000034099) TBX15 (ENSCCAG00000025037) SPAG17 (ENSCCAG00000023412) ENSCCAG00000035368 WDR3 (ENSCCAG00000037237) GDAP2 (ENSCCAG00000024697) TENT5C (ENSCCAG00000020387) MAN1A2 (ENSCCAG00000034354) VTCN1 (ENSCCAG00000037336) TRIM45 (ENSCCAG00000010371) Bolivian squirrel monkey MODERN SPECIES 272 ADAM30 (ENSSBOG00000029747) NOTCH2 (ENSSBOG00000002112) SEC22B (ENSSBOG00000025016) PDE4DIP (ENSSBOG00000029404) ##22 Marmoset MODERN SPECIES 19 ENSCJAG00000074294 ENSCJAG00000023348 ENSCJAG00000085345 ZNF697 (ENSCJAG00000022909) ENSCJAG00000085290 REG4 (ENSCJAG00000019892) ENSCJAG00000046196 HMGCS2 (ENSCJAG00000019899) ENSCJAG00000019916 ENSCJAG00000066741 ENSCJAG00000052544 NOTCH2 (ENSCJAG00000019931) ENSCJAG00000054184 ENSCJAG00000061592 SEC22B (ENSCJAG00000043279) PDE4DIP (ENSCJAG00000019954) ##22 ENSCJAG00000086984 ENSCJAG00000039799 Catarrhini ANCESTRAL SPECIES 3 ENSGT00940000161374.b.a.a ENSGT00940000161374.b.a.b ENSGT00940000161374.a.b ENSGT00940000161374.b.b ENSGT00940000161374.a.a ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00420000029746.e.a.b.a.a.a.a.b.a ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b Hominoidea ANCESTRAL SPECIES 3 ENSGT00940000161374.b.a.b ENSGT00940000161374.a.b ENSGT00940000161374.b.b ENSGT00940000161374.a.a.c ENSGT00940000161374.a.a.d ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00420000029746.e.a.b.a.a.a.a.b.a ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a.a.a.a.a Gibbon MODERN SPECIES 2 HAO2 (ENSNLEG00000005367) HSD3B2 (ENSNLEG00000035250) ENSNLEG00000027319 HSD3B1 (ENSNLEG00000005390) ENSNLEG00000027783 ENSNLEG00000035738 ENSNLEG00000034143 ZNF697 (ENSNLEG00000005403) PHGDH (ENSNLEG00000005408) HMGCS2 (ENSNLEG00000005455) REG4 (ENSNLEG00000005464) ENSNLEG00000035008 ENSNLEG00000036247 NOTCH2 (ENSNLEG00000005474) SEC22B (ENSNLEG00000005498) PDE4DIP (ENSNLEG00000005504) ##22 ENSNLEG00000033214 ENSNLEG00000030673 ENSNLEG00000005551 PDZK1 (ENSNLEG00000005613) CD160 (ENSNLEG00000005622) RNF115 (ENSNLEG00000005628) POLR3C (ENSNLEG00000005645) ENSNLEG00000005664 PIAS3 (ENSNLEG00000005672) ANKRD35 (ENSNLEG00000005675) ITGA10 (ENSNLEG00000027150) PEX11B (ENSNLEG00000034032) ENSNLEG00000029457 RBM8A (ENSNLEG00000029632) LIX1L (ENSNLEG00000032979) Hominidae ANCESTRAL SPECIES 3 ENSGT00940000161374.b.a.b ENSGT00940000161374.a.b ENSGT00940000161374.b.b ENSGT00940000161374.a.a.c ENSGT00940000161374.a.a.d ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00420000029746.e.a.b.a.a.a.a.b.a ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a.a.a.a.a Orangutan DUPLICATION Orangutan MODERN SPECIES WARS2 (ENSPPYG00000037222) HAO2 (ENSPPYG00000000966) HSD3B2 (ENSPPYG00000000964) ENSPPYG00000034285 HSD3B1 (ENSPPYG00000000965) ZNF697 (ENSPPYG00000000963) PHGDH (ENSPPYG00000000962) HMGCS2 (ENSPPYG00000000961) REG4 (ENSPPYG00000000960) ENSPPYG00000000959 ADAM30 (ENSPPYG00000040766) NOTCH2 (ENSPPYG00000030910) SEC22B (ENSPPYG00000000957) ENSPPYG00000039379 PDE4DIPP2 (ENSPPYG00000000955) ##22 ENSPPYG00000034509 ##22 ENSPPYG00000000940 PDZK1 (ENSPPYG00000000939) ENSPPYG00000000938 RNF115 (ENSPPYG00000000937) POLR3C (ENSPPYG00000000936) NUDT17 (ENSPPYG00000000935) PIAS3 (ENSPPYG00000000934) ANKRD35 (ENSPPYG00000000933) ITGA10 (ENSPPYG00000000932) PEX11B (ENSPPYG00000000931) ENSPPYG00000000930 RBM8A (ENSPPYG00000000929) LIX1L (ENSPPYG00000000928) ANKRD34A (ENSPPYG00000000927) ENSPPYG00000029539 Orangutan MODERN SPECIES TBX15 (ENSPPYG00000000968) WARS2 (ENSPPYG00000037222) HAO2 (ENSPPYG00000000966) HSD3B2 (ENSPPYG00000000964) ENSPPYG00000034285 HSD3B1 (ENSPPYG00000000965) ZNF697 (ENSPPYG00000000963) PHGDH (ENSPPYG00000000962) HMGCS2 (ENSPPYG00000000961) REG4 (ENSPPYG00000000960) ENSPPYG00000000959 ADAM30 (ENSPPYG00000040766) NOTCH2 (ENSPPYG00000030910) SEC22B (ENSPPYG00000000957) ENSPPYG00000039379 PDE4DIPP2 (ENSPPYG00000000955) ##22 ENSPPYG00000034509 ##22 ENSPPYG00000000940 PDZK1 (ENSPPYG00000000939) ENSPPYG00000000938 RNF115 (ENSPPYG00000000937) POLR3C (ENSPPYG00000000936) NUDT17 (ENSPPYG00000000935) PIAS3 (ENSPPYG00000000934) ANKRD35 (ENSPPYG00000000933) ITGA10 (ENSPPYG00000000932) PEX11B (ENSPPYG00000000931) ENSPPYG00000000930 RBM8A (ENSPPYG00000000929) LIX1L (ENSPPYG00000000928) ANKRD34A (ENSPPYG00000000927) Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00390000018717.b.a.b ENSGT00940000161374.b.a.a ENSGT00940000161374.b.a.b ENSGT00940000161374.a.b ENSGT00940000161374.b.b ENSGT00940000161374.a.a.c ENSGT00940000161374.a.a.d ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a.a.a.a.a.c.a.a Gorilla DUPLICATION Gorilla MODERN SPECIES POLR3C (ENSGGOG00000007279) NUDT17 (ENSGGOG00000007275) PIAS3 (ENSGGOG00000007266) ANKRD35 (ENSGGOG00000015424) ITGA10 (ENSGGOG00000015407) PEX11B (ENSGGOG00000015402) ENSGGOG00000005412 RBM8A (ENSGGOG00000037248) LIX1L (ENSGGOG00000005408) ANKRD34A (ENSGGOG00000026080) POLR3GL (ENSGGOG00000011848) TXNIP (ENSGGOG00000011838) HJV (ENSGGOG00000004941) ENSGGOG00000016905 ENSGGOG00000041877 ENSGGOG00000005721 ##22 ENSGGOG00000040778 ##22 ENSGGOG00000038304 ENSGGOG00000037577 ENSGGOG00000024499 ENSGGOG00000041518 ENSGGOG00000037054 NOTCH2 (ENSGGOG00000004007) ADAM30 (ENSGGOG00000004006) ENSGGOG00000043775 REG4 (ENSGGOG00000000553) HMGCS2 (ENSGGOG00000010293) PHGDH (ENSGGOG00000010284) ZNF697 (ENSGGOG00000006415) ENSGGOG00000041320 HSD3B1 (ENSGGOG00000003349) Gorilla MODERN SPECIES NUDT17 (ENSGGOG00000007275) PIAS3 (ENSGGOG00000007266) ANKRD35 (ENSGGOG00000015424) ITGA10 (ENSGGOG00000015407) PEX11B (ENSGGOG00000015402) ENSGGOG00000005412 RBM8A (ENSGGOG00000037248) LIX1L (ENSGGOG00000005408) ANKRD34A (ENSGGOG00000026080) POLR3GL (ENSGGOG00000011848) TXNIP (ENSGGOG00000011838) HJV (ENSGGOG00000004941) ENSGGOG00000016905 ENSGGOG00000041877 ENSGGOG00000005721 ##22 ENSGGOG00000040778 ##22 ENSGGOG00000038304 ENSGGOG00000037577 ENSGGOG00000024499 ENSGGOG00000041518 ENSGGOG00000037054 NOTCH2 (ENSGGOG00000004007) ADAM30 (ENSGGOG00000004006) ENSGGOG00000043775 REG4 (ENSGGOG00000000553) HMGCS2 (ENSGGOG00000010293) PHGDH (ENSGGOG00000010284) ZNF697 (ENSGGOG00000006415) ENSGGOG00000041320 HSD3B1 (ENSGGOG00000003349) HSD3B2 (ENSGGOG00000041410) Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00890000139472.a.b ENSGT00390000018717.b.a.b ENSGT00940000161374.b.a.a ENSGT00940000161374.b.a.b ENSGT00940000161374.a.b ENSGT00940000161374.b.b ENSGT00940000161374.a.a.c ENSGT00940000161374.a.a.d ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a.a.a.a.a.c.a.a Human MODERN SPECIES NBPF12 (ENSG00000268043) PRKAB2 (ENSG00000131791) FMO5 (ENSG00000131781) CHD1L (ENSG00000131778) BCL9 (ENSG00000116128) ENSG00000288626 ACP6 (ENSG00000162836) GJA5 (ENSG00000265107) GJA8 (ENSG00000121634) GPR89B (ENSG00000188092) NBPF11 (ENSG00000263956) PPIAL4G (ENSG00000236334) NBPF14 (ENSG00000270629) NOTCH2NLB (ENSG00000286019) NUDT4B (ENSG00000177144) PDE4DIP (ENSG00000178104) ##22 NBPF9 (ENSG00000269713) NOTCH2NLC (ENSG00000286219) ENSG00000286185 NBPF19 (ENSG00000271383) PPIAL4C (ENSG00000288867) FCGR1A (ENSG00000150337) H2BC18 (ENSG00000203814) H3C13 (ENSG00000183598) H4C14 (ENSG00000270882) H3C14 (ENSG00000203811) H2AC18 (ENSG00000288825) H2AC19 (ENSG00000288859) H3C15 (ENSG00000203852) H4C15 (ENSG00000270276) H2BC21 (ENSG00000184678) Pan ANCESTRAL SPECIES ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT00910000145379 ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00950000183112.b.b ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000155030 ENSGT00940000162954 ENSGT00940000153664.A.a.n.o.b ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000161374.a.a.d ENSGT00940000161374.a.a.c ENSGT00940000161374.b.b ENSGT00940000161374.a.b ENSGT00940000161374.b.a.b ENSGT00940000161374.b.a.a ENSGT00390000018717.b.a.b Bonobo DUPLICATION Bonobo MODERN SPECIES 293 ENSPPAG00000009558 ##22 ENSPPAG00000034308 ##22 Bonobo MODERN SPECIES 293 ENSPPAG00000009558 ##22 ENSPPAG00000034308 ##22 Chimpanzee MODERN SPECIES CD160 (ENSPTRG00000001211) RNF115 (ENSPTRG00000001210) POLR3C (ENSPTRG00000001208) NUDT17 (ENSPTRG00000001207) PIAS3 (ENSPTRG00000001206) ANKRD35 (ENSPTRG00000022831) ITGA10 (ENSPTRG00000001204) PEX11B (ENSPTRG00000001203) ENSPTRG00000001202 RBM8A (ENSPTRG00000001201) LIX1L (ENSPTRG00000001200) ANKRD34A (ENSPTRG00000001199) POLR3GL (ENSPTRG00000001198) HJV (ENSPTRG00000044540) ENSPTRG00000046704 PDE4DIP (ENSPTRG00000001188) ##22 ENSPTRG00000047110 ENSPTRG00000051383 ENSPTRG00000044177 NOTCH2 (ENSPTRG00000048364) ADAM30 (ENSPTRG00000030467) ENSPTRG00000034182 ENSPTRG00000000232 REG4 (ENSPTRG00000001180) HMGCS2 (ENSPTRG00000001179) PHGDH (ENSPTRG00000001178) ZNF697 (ENSPTRG00000001177) ENSPTRG00000052660 ENSPTRG00000042979 HSD3B1 (ENSPTRG00000024031) ENSPTRG00000047558 Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00940000161374.b.a.a ENSGT00940000161374.b.a.b ENSGT00940000161374.a.b ENSGT00940000161374.b.b ENSGT00940000161374.a.a.a ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00420000029746.e.a.b.a.a.a.a.b.a ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00390000017971 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b Cercopithecinae ANCESTRAL SPECIES 73 ENSGT00390000017971 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.b Vervet Monkey MODERN SPECIES 12 WARS2 (ENSCSAG00000001713) HAO2 (ENSCSAG00000001715) HSD3B2 (ENSCSAG00000001716) HSD3B1 (ENSCSAG00000001717) ENSCSAG00000000174 ZNF697 (ENSCSAG00000001718) PHGDH (ENSCSAG00000001719) HMGCS2 (ENSCSAG00000001721) REG4 (ENSCSAG00000001723) ENSCSAG00000001730 ENSCSAG00000001734 ADAM30 (ENSCSAG00000001737) NOTCH2 (ENSCSAG00000001741) SEC22B (ENSCSAG00000001743) ENSCSAG00000000175 PDE4DIP (ENSCSAG00000001746) ##22 ENSCSAG00000001749 ENSCSAG00000001753 ENSCSAG00000001755 PDZK1 (ENSCSAG00000001757) CD160 (ENSCSAG00000001758) ENSCSAG00000000176 RNF115 (ENSCSAG00000001760) POLR3C (ENSCSAG00000001762) NUDT17 (ENSCSAG00000001766) PIAS3 (ENSCSAG00000001768) ANKRD35 (ENSCSAG00000001771) ITGA10 (ENSCSAG00000001775) PEX11B (ENSCSAG00000001777) ENSCSAG00000001778 RBM8A (ENSCSAG00000001779) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000161374.a.b ENSGT00940000161374.b.b ENSGT00390000010165.i.b.b.b ENSGT01020000230346.A.cb.a.c ENSGT00940000161374.a.a.b ENSGT00940000161374.a.a.a ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00420000029746.e.a.b.a.a.a.a.b.a ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a.a.a.b ENSGT00860000136151.f ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00940000161374.b.a.a ENSGT00940000161374.b.a.b ENSGT00940000161374.b.b ENSGT00390000010165.i.b.b.b ENSGT01020000230346.A.cb.a.c ENSGT00940000161374.a.a.b ENSGT00940000161374.a.a.a ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.a ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b Cercopithecinae_d ANCESTRAL SPECIES 49 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000161374.b.a.a ENSGT00940000161374.b.a.b ENSGT00940000161374.b.b ENSGT01020000230346.A.cb.a.c ENSGT00940000161374.a.a.b ENSGT00940000161374.a.a.a ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 Sooty mangabey MODERN SPECIES 304 WARS2 (ENSCATG00000041648) HAO2 (ENSCATG00000035352) HSD3B2 (ENSCATG00000031867) ENSCATG00000033726 HSD3B1 (ENSCATG00000028188) ENSCATG00000031604 ENSCATG00000042151 ENSCATG00000035127 ZNF697 (ENSCATG00000002584) PHGDH (ENSCATG00000038103) HMGCS2 (ENSCATG00000032352) REG4 (ENSCATG00000001299) ENSCATG00000032864 NOTCH2 (ENSCATG00000041772) SEC22B (ENSCATG00000039138) PDE4DIP (ENSCATG00000031339) ##22 ENSCATG00000039858 ENSCATG00000036091 Drill MODERN SPECIES 333 NOTCH2 (ENSMLEG00000030260) NOTCH2NLR (ENSMLEG00000030050) SEC22B (ENSMLEG00000031638) PDE4DIP (ENSMLEG00000035720) ##22 Olive baboon DUPLICATION Olive baboon MODERN SPECIES HSD3B2 (ENSPANG00000009969) ENSPANG00000048358 HSD3B1 (ENSPANG00000012519) ENSPANG00000037056 ENSPANG00000017026 ENSPANG00000037635 ZNF697 (ENSPANG00000018117) PHGDH (ENSPANG00000012431) HMGCS2 (ENSPANG00000011380) ENSPANG00000044597 REG4 (ENSPANG00000009171) ENSPANG00000031162 ADAM30 (ENSPANG00000021035) NOTCH2 (ENSPANG00000024009) SEC22B (ENSPANG00000033849) ENSPANG00000050046 ##22 ENSPANG00000005600 ##22 CHD1L (ENSPANG00000009170) BCL9 (ENSPANG00000021034) ACP6 (ENSPANG00000004993) GJA5 (ENSPANG00000014222) ENSPANG00000040876 GJA8 (ENSPANG00000014667) ENSPANG00000049208 ENSPANG00000037273 ENSPANG00000012430 ENSPANG00000037189 ENSPANG00000036881 ##22 ENSPANG00000002791 FCGR1A (ENSPANG00000001763) H2BC18 (ENSPANG00000040080) Olive baboon MODERN SPECIES ENSPANG00000048358 HSD3B1 (ENSPANG00000012519) ENSPANG00000037056 ENSPANG00000017026 ENSPANG00000037635 ZNF697 (ENSPANG00000018117) PHGDH (ENSPANG00000012431) HMGCS2 (ENSPANG00000011380) ENSPANG00000044597 REG4 (ENSPANG00000009171) ENSPANG00000031162 ADAM30 (ENSPANG00000021035) NOTCH2 (ENSPANG00000024009) SEC22B (ENSPANG00000033849) ENSPANG00000050046 ##22 ENSPANG00000005600 ##22 CHD1L (ENSPANG00000009170) BCL9 (ENSPANG00000021034) ACP6 (ENSPANG00000004993) GJA5 (ENSPANG00000014222) ENSPANG00000040876 GJA8 (ENSPANG00000014667) ENSPANG00000049208 ENSPANG00000037273 ENSPANG00000012430 ENSPANG00000037189 ENSPANG00000036881 ##22 ENSPANG00000002791 FCGR1A (ENSPANG00000001763) H2BC18 (ENSPANG00000040080) H3C13 (ENSPANG00000045449) Macaca ANCESTRAL SPECIES ENSGT00940000161374.b.a.a ENSGT00940000161374.b.a.b ENSGT00940000161374.a.b ENSGT00940000161374.b.b ENSGT00390000010165.i.b.b.b ENSGT01020000230346.A.cb.a.c ENSGT00940000161374.a.a.b ENSGT00940000161374.a.a.a ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a.a.a.b ENSGT00860000136151.e.a ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a Pig-tailed macaque MODERN SPECIES 556 HAO2 (ENSMNEG00000033251) HSD3B2 (ENSMNEG00000004563) ENSMNEG00000042859 ENSMNEG00000036898 HSD3B1 (ENSMNEG00000038988) ENSMNEG00000034901 ENSMNEG00000044623 ENSMNEG00000028701 ZNF697 (ENSMNEG00000032913) PHGDH (ENSMNEG00000039018) HMGCS2 (ENSMNEG00000037230) REG4 (ENSMNEG00000028106) ENSMNEG00000044277 NOTCH2 (ENSMNEG00000028518) SEC22B (ENSMNEG00000042539) PDE4DIP (ENSMNEG00000022523) ##22 ENSMNEG00000037985 ENSMNEG00000030638 ENSMNEG00000030135 PDZK1 (ENSMNEG00000021393) CD160 (ENSMNEG00000043287) ENSMNEG00000033399 RNF115 (ENSMNEG00000031592) POLR3C (ENSMNEG00000040944) NUDT17 (ENSMNEG00000041081) PIAS3 (ENSMNEG00000036118) ANKRD35 (ENSMNEG00000031803) ITGA10 (ENSMNEG00000035387) PEX11B (ENSMNEG00000029865) ENSMNEG00000042887 RBM8A (ENSMNEG00000040422) Macaca_a ANCESTRAL SPECIES ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000161374.b.a.a ENSGT00940000161374.b.a.b ENSGT00940000161374.a.b ENSGT00940000161374.b.b ENSGT00390000010165.i.b.b.b ENSGT00820000127150 ENSGT00940000161374.a.a.b ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746.e.a.b.a.a.a.b ENSGT00940000164709.a.b.b.b.a.b.c.b.b ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a Crab-eating macaque DUPLICATION Crab-eating macaque MODERN SPECIES WARS2 (ENSMFAG00000001270) HAO2 (ENSMFAG00000002851) HSD3B2 (ENSMFAG00000000449) ENSMFAG00000037292 ENSMFAG00000039795 HSD3B1 (ENSMFAG00000045839) ENSMFAG00000049256 ENSMFAG00000056103 ENSMFAG00000061533 PHGDH (ENSMFAG00000032226) HMGCS2 (ENSMFAG00000043696) REG4 (ENSMFAG00000005388) ADAM30 (ENSMFAG00000036625) NOTCH2 (ENSMFAG00000001144) SEC22B (ENSMFAG00000043165) ENSMFAG00000047720 ##22 ENSMFAG00000003812 ##22 ENSMFAG00000035716 ENSMFAG00000063634 ENSMFAG00000057159 ENSMFAG00000059274 ENSMFAG00000001098 CD160 (ENSMFAG00000043835) ENSMFAG00000041095 PDZK1 (ENSMFAG00000018292) RNF115 (ENSMFAG00000042451) POLR3C (ENSMFAG00000040338) NUDT17 (ENSMFAG00000042456) PIAS3 (ENSMFAG00000001990) ANKRD35 (ENSMFAG00000036117) ITGA10 (ENSMFAG00000043309) Crab-eating macaque MODERN SPECIES HAO2 (ENSMFAG00000002851) HSD3B2 (ENSMFAG00000000449) ENSMFAG00000037292 ENSMFAG00000039795 HSD3B1 (ENSMFAG00000045839) ENSMFAG00000049256 ENSMFAG00000056103 ENSMFAG00000061533 PHGDH (ENSMFAG00000032226) HMGCS2 (ENSMFAG00000043696) REG4 (ENSMFAG00000005388) ADAM30 (ENSMFAG00000036625) NOTCH2 (ENSMFAG00000001144) SEC22B (ENSMFAG00000043165) ENSMFAG00000047720 ##22 ENSMFAG00000003812 ##22 ENSMFAG00000035716 ENSMFAG00000063634 ENSMFAG00000057159 ENSMFAG00000059274 ENSMFAG00000001098 CD160 (ENSMFAG00000043835) ENSMFAG00000041095 PDZK1 (ENSMFAG00000018292) RNF115 (ENSMFAG00000042451) POLR3C (ENSMFAG00000040338) NUDT17 (ENSMFAG00000042456) PIAS3 (ENSMFAG00000001990) ANKRD35 (ENSMFAG00000036117) ITGA10 (ENSMFAG00000043309) PEX11B (ENSMFAG00000052735) Rhesus DUPLICATION Rhesus MODERN SPECIES HAO2 (ENSMMUG00000016567) HSD3B2 (ENSMMUG00000016568) HSD3B1 (ENSMMUG00000047765) ENSMMUG00000056972 ZNF697 (ENSMMUG00000060016) ENSMMUG00000029348 PHGDH (ENSMMUG00000023089) HMGCS2 (ENSMMUG00000023097) ENSMMUG00000062170 REG4 (ENSMMUG00000060387) ENSMMUG00000014849 ENSMMUG00000052610 ADAM30 (ENSMMUG00000017482) NOTCH2 (ENSMMUG00000018375) SEC22B (ENSMMUG00000062859) ENSMMUG00000054069 ##22 ENSMMUG00000044046 ##22 ENSMMUG00000055722 ENSMMUG00000056325 ENSMMUG00000053312 GPR89A (ENSMMUG00000019640) PDZK1 (ENSMMUG00000019642) CD160 (ENSMMUG00000007969) RNF115 (ENSMMUG00000016736) POLR3C (ENSMMUG00000016735) NUDT17 (ENSMMUG00000016734) ITGA10 (ENSMMUG00000016043) PEX11B (ENSMMUG00000016048) GNRHR2 (ENSMMUG00000016049) RBM8A (ENSMMUG00000016051) LIX1L (ENSMMUG00000016053) Rhesus MODERN SPECIES HSD3B2 (ENSMMUG00000016568) HSD3B1 (ENSMMUG00000047765) ENSMMUG00000056972 ZNF697 (ENSMMUG00000060016) ENSMMUG00000029348 PHGDH (ENSMMUG00000023089) HMGCS2 (ENSMMUG00000023097) ENSMMUG00000062170 REG4 (ENSMMUG00000060387) ENSMMUG00000014849 ENSMMUG00000052610 ADAM30 (ENSMMUG00000017482) NOTCH2 (ENSMMUG00000018375) SEC22B (ENSMMUG00000062859) ENSMMUG00000054069 ##22 ENSMMUG00000044046 ##22 ENSMMUG00000055722 ENSMMUG00000056325 ENSMMUG00000053312 GPR89A (ENSMMUG00000019640) PDZK1 (ENSMMUG00000019642) CD160 (ENSMMUG00000007969) RNF115 (ENSMMUG00000016736) POLR3C (ENSMMUG00000016735) NUDT17 (ENSMMUG00000016734) ITGA10 (ENSMMUG00000016043) PEX11B (ENSMMUG00000016048) GNRHR2 (ENSMMUG00000016049) RBM8A (ENSMMUG00000016051) LIX1L (ENSMMUG00000016053) ANKRD34A (ENSMMUG00000040654) Rhinopithecus ANCESTRAL SPECIES 624 ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349.i ENSGT00950000183190.a.a.b ##22 Golden snub-nosed monkey MODERN SPECIES 901 REG4 (ENSRROG00000028653) ENSRROG00000044943 NOTCH2 (ENSRROG00000037806) ENSRROG00000043424 PDE4DIP (ENSRROG00000043075) ##22 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 2546 REG4 (ENSRBIG00000035441) ENSRBIG00000037781 ADAM30 (ENSRBIG00000034509) NOTCH2 (ENSRBIG00000041528) ENSRBIG00000033964 ENSRBIG00000040934 ##22 ENSRBIG00000037466 ##22 Black snub-nosed monkey MODERN SPECIES 2546 REG4 (ENSRBIG00000035441) ENSRBIG00000037781 ADAM30 (ENSRBIG00000034509) NOTCH2 (ENSRBIG00000041528) ENSRBIG00000033964 ENSRBIG00000040934 ##22 ENSRBIG00000037466 ##22 Atlantogenata ANCESTRAL SPECIES 184 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00390000017971 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746 Xenarthra ANCESTRAL SPECIES 1105 ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00420000029746 Armadillo MODERN SPECIES 565 C1orf198 (ENSDNOG00000038164) CAPN9 (ENSDNOG00000048702) ADAM30 (ENSDNOG00000010206) NOTCH2 (ENSDNOG00000010476) SEC22B (ENSDNOG00000033611) PDE4DIP (ENSDNOG00000017545) ##22 ENSDNOG00000048280 Sloth MODERN SPECIES 6378 ENSCHOG00000007879 ##22 Afrotheria ANCESTRAL SPECIES 31 ENSGT00940000155030 ENSGT00940000156349 ENSGT00390000017971 ENSGT00950000183190.a.a.b ##22 ENSGT00940000162954.i ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 Tenrec MODERN SPECIES 7025 ENSETEG00000005387 PDE4DIP (ENSETEG00000005376) ##22 Afrotheria_a ANCESTRAL SPECIES 31 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183190.a.a.b ##22 ENSGT00940000162954.i ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 ENSGT00940000154334.k Elephant DUPLICATION Elephant MODERN SPECIES 26 NOTCH2 (ENSLAFG00000011961) SEC22B (ENSLAFG00000029746) ENSLAFG00000026428 ##22 ENSLAFG00000009827 ##22 ENSLAFG00000026695 PHGDH (ENSLAFG00000002391) ZNF697 (ENSLAFG00000032116) ENSLAFG00000027896 HAO2 (ENSLAFG00000010622) WARS2 (ENSLAFG00000018455) TBX15 (ENSLAFG00000018452) SPAG17 (ENSLAFG00000012115) WDR3 (ENSLAFG00000012108) GDAP2 (ENSLAFG00000012098) TENT5C (ENSLAFG00000014696) MAN1A2 (ENSLAFG00000017263) VTCN1 (ENSLAFG00000006818) TRIM45 (ENSLAFG00000005156) ENSLAFG00000006808 Elephant MODERN SPECIES 26 NOTCH2 (ENSLAFG00000011961) SEC22B (ENSLAFG00000029746) ENSLAFG00000026428 ##22 ENSLAFG00000009827 ##22 ENSLAFG00000026695 PHGDH (ENSLAFG00000002391) ZNF697 (ENSLAFG00000032116) ENSLAFG00000027896 HAO2 (ENSLAFG00000010622) WARS2 (ENSLAFG00000018455) TBX15 (ENSLAFG00000018452) SPAG17 (ENSLAFG00000012115) WDR3 (ENSLAFG00000012108) GDAP2 (ENSLAFG00000012098) TENT5C (ENSLAFG00000014696) MAN1A2 (ENSLAFG00000017263) VTCN1 (ENSLAFG00000006818) TRIM45 (ENSLAFG00000005156) Hyrax MODERN SPECIES 5931 PDE4DIP (ENSPCAG00000002515) ##22 Marsupialia ANCESTRAL SPECIES 2 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000162954.k.b.a ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000163677.a.b.a.b ENSGT00940000162954.k.b.b ENSGT00940000162954.k.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.y.a.a ENSGT01100000263570.B.y.a.b.a ENSGT01100000263570.B.y.a.b.b ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000162954.k.b.a ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000163677.a.b.a.b ENSGT00940000162954.k.b.b ENSGT00940000162954.k.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.y.a.a ENSGT01100000263570.B.y.a.b.a ENSGT01100000263570.B.y.a.b.b ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 Diprotodontia ANCESTRAL SPECIES 5 ENSGT00940000153859.a ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000162954.k.b.a ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000162954.k.b.b ENSGT00940000162954.k.a ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.y.a.a ENSGT01100000263570.B.y.a.b.a ENSGT01100000263570.B.y.a.b.b ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 ENSGT00390000002799 Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT00390000013693 ENSGT00940000159013 ENSGT00940000153724.A ENSGT00390000018717.b.a.b ENSGT00940000155444 ENSGT00940000162954.k.b.a ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00820000127150 ENSGT00940000162954.k.b.b ENSGT00940000162954.k.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00670000098708 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000159402 ENSGT01100000263570.B.y.a.a ENSGT01100000263570.B.y.a.b.a ENSGT01100000263570.B.y.a.b.b.f.b ENSGT01100000263570.B.y.a.b.b.f.a ENSGT00730000110915.b ENSGT00940000158408 ENSGT01050000244864.C ENSGT01050000244864.D ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00940000157203 Common wonbat MODERN SPECIES 1021 SPAG17 (ENSVURG00010008196) TBX15 (ENSVURG00010008181) WARS2 (ENSVURG00010008172) ENSVURG00010008169 HAO2 (ENSVURG00010008161) ENSVURG00010008135 ENSVURG00010008118 ENSVURG00010008116 HMGCS2 (ENSVURG00010008096) ENSVURG00010008087 ZNF697 (ENSVURG00010008076) ENSVURG00010008071 ENSVURG00010008068 NOTCH2 (ENSVURG00010008016) SEC22B (ENSVURG00010008005) PDE4DIP (ENSVURG00010007887) ##22 PRKAB2 (ENSVURG00010007799) FMO5 (ENSVURG00010007787) CHD1L (ENSVURG00010007770) ENSVURG00010007759 ENSVURG00010007749 koala MODERN SPECIES 4 TBX15 (ENSPCIG00000032331) WARS2 (ENSPCIG00000029906) HAO2 (ENSPCIG00000009529) ENSPCIG00000023855 PHGDH (ENSPCIG00000023854) ENSPCIG00000023853 REG4 (ENSPCIG00000023851) HMGCS2 (ENSPCIG00000003274) ENSPCIG00000035747 ZNF697 (ENSPCIG00000009940) ENSPCIG00000009942 ENSPCIG00000037188 NOTCH2 (ENSPCIG00000030297) SEC22B (ENSPCIG00000037279) ENSPCIG00000030406 PDE4DIP (ENSPCIG00000030408) ##22 PRKAB2 (ENSPCIG00000005330) FMO5 (ENSPCIG00000005342) ENSPCIG00000030409 ENSPCIG00000030410 ENSPCIG00000030411 ENSPCIG00000026096 ENSPCIG00000001575 BCL9 (ENSPCIG00000015994) ACP6 (ENSPCIG00000006969) GJA5 (ENSPCIG00000027164) GJA8 (ENSPCIG00000027167) ENSPCIG00000027174 PDZK1 (ENSPCIG00000027178) ENSPCIG00000011960 RNF115 (ENSPCIG00000011957) Wallaby MODERN SPECIES 8571 ENSMEUG00000016531 ##22 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000031021 TBX15 (ENSSHAG00000012785) WARS2 (ENSSHAG00000013680) HAO2 (ENSSHAG00000014895) ENSSHAG00000027956 ENSSHAG00000015157 ENSSHAG00000015317 ENSSHAG00000015388 ENSSHAG00000015508 ENSSHAG00000024273 ENSSHAG00000022370 ENSSHAG00000015826 ENSSHAG00000027836 ENSSHAG00000015968 ENSSHAG00000026731 ENSSHAG00000016806 ##22 ENSSHAG00000017172 ENSSHAG00000017295 CHD1L (ENSSHAG00000017395) ENSSHAG00000020897 ENSSHAG00000030547 ENSSHAG00000024790 ENSSHAG00000022401 ENSSHAG00000023811 ENSSHAG00000028022 BCL9 (ENSSHAG00000018010) ACP6 (ENSSHAG00000018071) GJA5 (ENSSHAG00000018182) GJA8 (ENSSHAG00000018387) ENSSHAG00000018415 ENSSHAG00000018452 Opossum DUPLICATION Opossum DUPLICATION Opossum MODERN SPECIES 1 WARS2 (ENSMODG00000049612) HAO2 (ENSMODG00000005385) ENSMODG00000040590 ENSMODG00000037049 PHGDH (ENSMODG00000005422) ENSMODG00000005437 REG4 (ENSMODG00000018685) ENSMODG00000028020 ZNF697 (ENSMODG00000040515) ENSMODG00000018692 ENSMODG00000018694 NOTCH2 (ENSMODG00000018700) SEC22B (ENSMODG00000018705) ENSMODG00000042744 ##22 ENSMODG00000039193 ##22 ENSMODG00000018708 ##22 ENSMODG00000047198 ENSMODG00000018710 FMO5 (ENSMODG00000018713) ENSMODG00000038963 CHD1L (ENSMODG00000018717) ENSMODG00000045333 ENSMODG00000051286 ENSMODG00000040405 ENSMODG00000018731 ENSMODG00000043114 ENSMODG00000044075 ENSMODG00000018734 ENSMODG00000038369 ENSMODG00000037707 BCL9 (ENSMODG00000018736) Opossum MODERN SPECIES 1 SPAG17 (ENSMODG00000005306) TBX15 (ENSMODG00000005319) WARS2 (ENSMODG00000049612) HAO2 (ENSMODG00000005385) ENSMODG00000040590 ENSMODG00000037049 PHGDH (ENSMODG00000005422) ENSMODG00000005437 REG4 (ENSMODG00000018685) ENSMODG00000028020 ZNF697 (ENSMODG00000040515) ENSMODG00000018692 ENSMODG00000018694 NOTCH2 (ENSMODG00000018700) SEC22B (ENSMODG00000018705) ENSMODG00000042744 ##22 ENSMODG00000039193 ##22 ENSMODG00000018708 ##22 ENSMODG00000047198 ENSMODG00000018710 FMO5 (ENSMODG00000018713) ENSMODG00000038963 CHD1L (ENSMODG00000018717) ENSMODG00000045333 ENSMODG00000051286 ENSMODG00000040405 ENSMODG00000018731 ENSMODG00000043114 ENSMODG00000044075 ENSMODG00000018734 ENSMODG00000038369 Opossum MODERN SPECIES 1 TBX15 (ENSMODG00000005319) WARS2 (ENSMODG00000049612) HAO2 (ENSMODG00000005385) ENSMODG00000040590 ENSMODG00000037049 PHGDH (ENSMODG00000005422) ENSMODG00000005437 REG4 (ENSMODG00000018685) ENSMODG00000028020 ZNF697 (ENSMODG00000040515) ENSMODG00000018692 ENSMODG00000018694 NOTCH2 (ENSMODG00000018700) SEC22B (ENSMODG00000018705) ENSMODG00000042744 ##22 ENSMODG00000039193 ##22 ENSMODG00000018708 ##22 ENSMODG00000047198 ENSMODG00000018710 FMO5 (ENSMODG00000018713) ENSMODG00000038963 CHD1L (ENSMODG00000018717) ENSMODG00000045333 ENSMODG00000051286 ENSMODG00000040405 ENSMODG00000018731 ENSMODG00000043114 ENSMODG00000044075 ENSMODG00000018734 ENSMODG00000038369 ENSMODG00000037707 Sauria ANCESTRAL SPECIES 7 ENSGT00510000046975.b.p.b ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00390000008608 ENSGT00940000156906 ENSGT00390000001322 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b Archelosauria ANCESTRAL SPECIES 9 ENSGT00940000164616 ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 Archosauria ANCESTRAL SPECIES 27 ENSGT00940000164616 ENSGT00510000046975.b.q ENSGT00390000007598 ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Australian saltwater crocodile MODERN SPECIES 28 UHMK1 (ENSCPRG00005001107) ENSCPRG00005001113 SPATA46 (ENSCPRG00005001118) TMEM121 (ENSCPRG00005001148) TEDC1 (ENSCPRG00005001201) CRIP1 (ENSCPRG00005001226) CRIP2 (ENSCPRG00005001228) MTA1 (ENSCPRG00005001248) PACS2 (ENSCPRG00005001267) SEC22B (ENSCPRG00005001287) NOTCH2 (ENSCPRG00005001488) ENSCPRG00005003087 ENSCPRG00005003091 HMGCS2 (ENSCPRG00005003094) PHGDH (ENSCPRG00005003122) PDE4DIP (ENSCPRG00005003176) ##22 PRKAB2 (ENSCPRG00005003576) ENSCPRG00005003653 ENSCPRG00005003917 PLPP6 (ENSCPRG00005003927) FAM78B (ENSCPRG00005003933) PRDX6 (ENSCPRG00005003937) TADA1 (ENSCPRG00005003943) ENSCPRG00005003957 FASLG (ENSCPRG00005003963) SUCO (ENSCPRG00005003969) PIGC (ENSCPRG00005003982) DNM3 (ENSCPRG00005003994) METTL13 (ENSCPRG00005004016) ITPA (ENSCPRG00005004021) VAMP4 (ENSCPRG00005004024) Aves ANCESTRAL SPECIES 7 ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160836.d ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 African ostrich MODERN SPECIES 539 MTA1 (ENSSCUG00000005681) ENSSCUG00000005680 PACS2 (ENSSCUG00000005675) SEC22B (ENSSCUG00000005669) NOTCH2 (ENSSCUG00000005617) ENSSCUG00000005576 ##22 PRKAB2 (ENSSCUG00000005574) ENSSCUG00000005572 PLPP6 (ENSSCUG00000005571) FAM78B (ENSSCUG00000005569) TADA1 (ENSSCUG00000005568) ENSSCUG00000005566 ENSSCUG00000005565 PRDX6 (ENSSCUG00000005563) FASLG (ENSSCUG00000005560) SUCO (ENSSCUG00000005555) PIGC (ENSSCUG00000005549) DNM3 (ENSSCUG00000005537) METTL13 (ENSSCUG00000005523) VAMP4 (ENSSCUG00000005519) PRRC2C (ENSSCUG00000005499) Neognathae ANCESTRAL SPECIES 8 ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160836.d ENSGT00940000160493.a ENSGT00940000160493.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 Neognathae_b ANCESTRAL SPECIES 10 ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 Passeriformes ANCESTRAL SPECIES 8 ENSGT00940000168828 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT01040000240999 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Great tit DUPLICATION Great tit MODERN SPECIES 28 TMEM121 (ENSPMJG00000009932) TEDC1 (ENSPMJG00000009937) ENSPMJG00000009940 CRIP1 (ENSPMJG00000009942) CRIP2 (ENSPMJG00000009944) ENSPMJG00000009959 ENSPMJG00000009961 PACS2 (ENSPMJG00000009962) SEC22B (ENSPMJG00000009966) NOTCH2 (ENSPMJG00000009978) ENSPMJG00000010110 HMGCS2 (ENSPMJG00000010112) PHGDH (ENSPMJG00000010114) ENSPMJG00000010118 ENSPMJG00000010127 ##22 ENSPMJG00000010128 ##22 PRKAB2 (ENSPMJG00000010129) FMO5 (ENSPMJG00000010131) PLPP6 (ENSPMJG00000010456) FAM78B (ENSPMJG00000010457) PRDX6 (ENSPMJG00000010460) TADA1 (ENSPMJG00000010476) ENSPMJG00000010477 FASLG (ENSPMJG00000010479) SUCO (ENSPMJG00000010480) PIGC (ENSPMJG00000010481) DNM3 (ENSPMJG00000010486) METTL13 (ENSPMJG00000010489) ITPA (ENSPMJG00000010490) VAMP4 (ENSPMJG00000010491) MYOC (ENSPMJG00000010492) Great tit MODERN SPECIES 28 TMEM121 (ENSPMJG00000009932) TEDC1 (ENSPMJG00000009937) ENSPMJG00000009940 CRIP1 (ENSPMJG00000009942) CRIP2 (ENSPMJG00000009944) ENSPMJG00000009959 ENSPMJG00000009961 PACS2 (ENSPMJG00000009962) SEC22B (ENSPMJG00000009966) NOTCH2 (ENSPMJG00000009978) ENSPMJG00000010110 HMGCS2 (ENSPMJG00000010112) PHGDH (ENSPMJG00000010114) ENSPMJG00000010118 ENSPMJG00000010127 ##22 ENSPMJG00000010128 ##22 PRKAB2 (ENSPMJG00000010129) FMO5 (ENSPMJG00000010131) PLPP6 (ENSPMJG00000010456) FAM78B (ENSPMJG00000010457) PRDX6 (ENSPMJG00000010460) TADA1 (ENSPMJG00000010476) ENSPMJG00000010477 FASLG (ENSPMJG00000010479) SUCO (ENSPMJG00000010480) PIGC (ENSPMJG00000010481) DNM3 (ENSPMJG00000010486) METTL13 (ENSPMJG00000010489) ITPA (ENSPMJG00000010490) VAMP4 (ENSPMJG00000010491) Passeriformes_d ANCESTRAL SPECIES 9 ENSGT00940000157769 ENSGT00940000168828 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT01040000240999 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Flycatcher MODERN SPECIES 27 TMEM121 (ENSFALG00000014517) ENSFALG00000003562 CRIP1 (ENSFALG00000026248) ENSFALG00000026183 ENSFALG00000023674 CRIP2 (ENSFALG00000028733) MTA1 (ENSFALG00000003592) ENSFALG00000023096 PACS2 (ENSFALG00000003599) SEC22B (ENSFALG00000003606) ENSFALG00000025163 ENSFALG00000003644 ENSFALG00000003721 HMGCS2 (ENSFALG00000026416) PHGDH (ENSFALG00000003733) ENSFALG00000003755 ##22 ENSFALG00000003783 ENSFALG00000015215 ENSFALG00000028558 ENSFALG00000003798 PRDX6 (ENSFALG00000003804) ENSFALG00000003815 ENSFALG00000014546 ENSFALG00000027355 FASLG (ENSFALG00000026011) SUCO (ENSFALG00000007801) PIGC (ENSFALG00000014545) DNM3 (ENSFALG00000007806) METTL13 (ENSFALG00000007811) ENSFALG00000007818 MYOC (ENSFALG00000007826) Passeriformes_g ANCESTRAL SPECIES 41 ENSGT00940000157769 ENSGT01040000244588 ENSGT00940000168828 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT01040000240999 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 ENSGT00940000155005 Medium ground finch MODERN SPECIES 124 UAP1 (ENSGFOG00000012862) UHMK1 (ENSGFOG00000012866) ENSGFOG00000012870 ENSGFOG00000012875 ENSGFOG00000012879 TMEM121 (ENSGFOG00000012880) TEDC1 (ENSGFOG00000012882) CRIP1 (ENSGFOG00000012885) CRIP2 (ENSGFOG00000012890) MTA1 (ENSGFOG00000012922) PACS2 (ENSGFOG00000013363) NOTCH2 (ENSGFOG00000009054) ENSGFOG00000010309 HMGCS2 (ENSGFOG00000010314) PHGDH (ENSGFOG00000010318) PDE4DIP (ENSGFOG00000010333) ##22 PRKAB2 (ENSGFOG00000010357) ENSGFOG00000010364 ENSGFOG00000010369 PLPP6 (ENSGFOG00000010372) PRDX6 (ENSGFOG00000010392) TADA1 (ENSGFOG00000010402) FASLG (ENSGFOG00000010414) SUCO (ENSGFOG00000010429) PIGC (ENSGFOG00000010454) DNM3 (ENSGFOG00000010502) METTL13 (ENSGFOG00000011854) ITPA (ENSGFOG00000011860) VAMP4 (ENSGFOG00000011867) PRRC2C (ENSGFOG00000011875) FMO4 (ENSGFOG00000011887) Passeroidea ANCESTRAL SPECIES 40 ENSGT00940000153464.A.b ENSGT00940000157769 ENSGT00940000168828 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT01040000240999 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 ENSGT00940000155005 Common canary DUPLICATION Common canary MODERN SPECIES 126 ENSSCAG00000015575 #22 ENSSCAG00000015581 ##22 ENSSCAG00000015586 ##22 PRKAB2 (ENSSCAG00000015591) ENSSCAG00000015604 ENSSCAG00000015623 PLPP6 (ENSSCAG00000015642) FAM78B (ENSSCAG00000015648) PRDX6 (ENSSCAG00000015649) TADA1 (ENSSCAG00000015651) Common canary MODERN SPECIES 126 ENSSCAG00000015575 #22 ENSSCAG00000015581 ##22 ENSSCAG00000015586 ##22 PRKAB2 (ENSSCAG00000015591) ENSSCAG00000015604 ENSSCAG00000015623 PLPP6 (ENSSCAG00000015642) FAM78B (ENSSCAG00000015648) PRDX6 (ENSSCAG00000015649) TADA1 (ENSSCAG00000015651) Zebra finch DUPLICATION Zebra finch MODERN SPECIES 30 OLFML2B (ENSTGUG00000017073) HSD17B7 (ENSTGUG00000017081) DDR2 (ENSTGUG00000017130) ENSTGUG00000027710 UHMK1 (ENSTGUG00000021984) TEDC1 (ENSTGUG00000027622) CRIP1 (ENSTGUG00000029314) CRIP2 (ENSTGUG00000021671) MTA1 (ENSTGUG00000017196) PACS2 (ENSTGUG00000017216) SEC22B (ENSTGUG00000024370) NOTCH2 (ENSTGUG00000017231) ENSTGUG00000017242 HMGCS2 (ENSTGUG00000017243) PHGDH (ENSTGUG00000022462) ENSTGUG00000022295 ##22 ENSTGUG00000017245 ##22 ENSTGUG00000017248 ##22 PRKAB2 (ENSTGUG00000028771) FMO5 (ENSTGUG00000017252) PLPP6 (ENSTGUG00000029432) FAM78B (ENSTGUG00000017258) PRDX6 (ENSTGUG00000027567) TADA1 (ENSTGUG00000026809) ENSTGUG00000027132 FASLG (ENSTGUG00000017264) SUCO (ENSTGUG00000017265) PIGC (ENSTGUG00000017266) DNM3 (ENSTGUG00000017269) METTL13 (ENSTGUG00000017274) ITPA (ENSTGUG00000017279) Zebra finch MODERN SPECIES 30 HSD17B7 (ENSTGUG00000017081) DDR2 (ENSTGUG00000017130) ENSTGUG00000027710 UHMK1 (ENSTGUG00000021984) TEDC1 (ENSTGUG00000027622) CRIP1 (ENSTGUG00000029314) CRIP2 (ENSTGUG00000021671) MTA1 (ENSTGUG00000017196) PACS2 (ENSTGUG00000017216) SEC22B (ENSTGUG00000024370) NOTCH2 (ENSTGUG00000017231) ENSTGUG00000017242 HMGCS2 (ENSTGUG00000017243) PHGDH (ENSTGUG00000022462) ENSTGUG00000022295 ##22 ENSTGUG00000017245 ##22 ENSTGUG00000017248 ##22 PRKAB2 (ENSTGUG00000028771) FMO5 (ENSTGUG00000017252) PLPP6 (ENSTGUG00000029432) FAM78B (ENSTGUG00000017258) PRDX6 (ENSTGUG00000027567) TADA1 (ENSTGUG00000026809) ENSTGUG00000027132 FASLG (ENSTGUG00000017264) SUCO (ENSTGUG00000017265) PIGC (ENSTGUG00000017266) DNM3 (ENSTGUG00000017269) METTL13 (ENSTGUG00000017274) ITPA (ENSTGUG00000017279) VAMP4 (ENSTGUG00000025061) Zebra finch MODERN SPECIES 30 DDR2 (ENSTGUG00000017130) ENSTGUG00000027710 UHMK1 (ENSTGUG00000021984) TEDC1 (ENSTGUG00000027622) CRIP1 (ENSTGUG00000029314) CRIP2 (ENSTGUG00000021671) MTA1 (ENSTGUG00000017196) PACS2 (ENSTGUG00000017216) SEC22B (ENSTGUG00000024370) NOTCH2 (ENSTGUG00000017231) ENSTGUG00000017242 HMGCS2 (ENSTGUG00000017243) PHGDH (ENSTGUG00000022462) ENSTGUG00000022295 ##22 ENSTGUG00000017245 ##22 ENSTGUG00000017248 ##22 PRKAB2 (ENSTGUG00000028771) FMO5 (ENSTGUG00000017252) PLPP6 (ENSTGUG00000029432) FAM78B (ENSTGUG00000017258) PRDX6 (ENSTGUG00000027567) TADA1 (ENSTGUG00000026809) ENSTGUG00000027132 FASLG (ENSTGUG00000017264) SUCO (ENSTGUG00000017265) PIGC (ENSTGUG00000017266) DNM3 (ENSTGUG00000017269) METTL13 (ENSTGUG00000017274) ITPA (ENSTGUG00000017279) VAMP4 (ENSTGUG00000025061) ENSTGUG00000026352 Neognathae_c ANCESTRAL SPECIES 7 ENSGT00940000157769 ENSGT00940000164616 ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 Kakapo DUPLICATION Kakapo DUPLICATION Kakapo MODERN SPECIES 25 ENSSHBG00005018311 SPATA46 (ENSSHBG00005018309) ENSSHBG00005018306 TMEM121 (ENSSHBG00005018303) TEDC1 (ENSSHBG00005018300) CRIP1 (ENSSHBG00005018297) CRIP2 (ENSSHBG00005018294) MTA1 (ENSSHBG00005018289) PACS2 (ENSSHBG00005018285) SEC22B (ENSSHBG00005018280) NOTCH2 (ENSSHBG00005006669) ENSSHBG00005005608 HMGCS2 (ENSSHBG00005005589) PHGDH (ENSSHBG00005005502) ENSSHBG00005005481 ##22 ENSSHBG00005005457 ##22 ENSSHBG00005005436 ##22 ENSSHBG00005005423 ##22 PRKAB2 (ENSSHBG00005005402) ENSSHBG00005005380 ENSSHBG00005005361 ENSSHBG00005005329 ENSSHBG00005005304 ENSSHBG00005005286 ENSSHBG00005005270 ENSSHBG00005005259 ENSSHBG00005005246 PLPP6 (ENSSHBG00005000906) FAM78B (ENSSHBG00005000901) PRDX6 (ENSSHBG00005000895) TADA1 (ENSSHBG00005000887) Kakapo MODERN SPECIES 25 SPATA46 (ENSSHBG00005018309) ENSSHBG00005018306 TMEM121 (ENSSHBG00005018303) TEDC1 (ENSSHBG00005018300) CRIP1 (ENSSHBG00005018297) CRIP2 (ENSSHBG00005018294) MTA1 (ENSSHBG00005018289) PACS2 (ENSSHBG00005018285) SEC22B (ENSSHBG00005018280) NOTCH2 (ENSSHBG00005006669) ENSSHBG00005005608 HMGCS2 (ENSSHBG00005005589) PHGDH (ENSSHBG00005005502) ENSSHBG00005005481 ##22 ENSSHBG00005005457 ##22 ENSSHBG00005005436 ##22 ENSSHBG00005005423 ##22 PRKAB2 (ENSSHBG00005005402) ENSSHBG00005005380 ENSSHBG00005005361 ENSSHBG00005005329 ENSSHBG00005005304 ENSSHBG00005005286 ENSSHBG00005005270 ENSSHBG00005005259 ENSSHBG00005005246 PLPP6 (ENSSHBG00005000906) FAM78B (ENSSHBG00005000901) PRDX6 (ENSSHBG00005000895) TADA1 (ENSSHBG00005000887) ENSSHBG00005000873 Kakapo MODERN SPECIES 25 UHMK1 (ENSSHBG00005018314) ENSSHBG00005018311 SPATA46 (ENSSHBG00005018309) ENSSHBG00005018306 TMEM121 (ENSSHBG00005018303) TEDC1 (ENSSHBG00005018300) CRIP1 (ENSSHBG00005018297) CRIP2 (ENSSHBG00005018294) MTA1 (ENSSHBG00005018289) PACS2 (ENSSHBG00005018285) SEC22B (ENSSHBG00005018280) NOTCH2 (ENSSHBG00005006669) ENSSHBG00005005608 HMGCS2 (ENSSHBG00005005589) PHGDH (ENSSHBG00005005502) ENSSHBG00005005481 ##22 ENSSHBG00005005457 ##22 ENSSHBG00005005436 ##22 ENSSHBG00005005423 ##22 PRKAB2 (ENSSHBG00005005402) ENSSHBG00005005380 ENSSHBG00005005361 ENSSHBG00005005329 ENSSHBG00005005304 ENSSHBG00005005286 ENSSHBG00005005270 ENSSHBG00005005259 ENSSHBG00005005246 PLPP6 (ENSSHBG00005000906) FAM78B (ENSSHBG00005000901) PRDX6 (ENSSHBG00005000895) Golden eagle DUPLICATION Golden eagle MODERN SPECIES 3 UHMK1 (ENSACCG00020014642) ENSACCG00020014657 ENSACCG00020014674 SPATA46 (ENSACCG00020014688) TMEM121 (ENSACCG00020014698) TEDC1 (ENSACCG00020014715) CRIP1 (ENSACCG00020014733) CRIP2 (ENSACCG00020014742) MTA1 (ENSACCG00020014761) PACS2 (ENSACCG00020014813) SEC22B (ENSACCG00020014855) NOTCH2 (ENSACCG00020015594) REG4 (ENSACCG00020016143) HMGCS2 (ENSACCG00020016155) PHGDH (ENSACCG00020016168) ENSACCG00020016188 ##22 ENSACCG00020016199 ##22 ENSACCG00020016209 ##22 PRKAB2 (ENSACCG00020016217) ENSACCG00020016234 ENSACCG00020016245 PLPP6 (ENSACCG00020016252) FAM78B (ENSACCG00020016256) PRDX6 (ENSACCG00020016260) TADA1 (ENSACCG00020000569) ENSACCG00020000599 ENSACCG00020000626 FASLG (ENSACCG00020000653) SUCO (ENSACCG00020000747) PIGC (ENSACCG00020000792) DNM3 (ENSACCG00020000818) Golden eagle DUPLICATION Golden eagle MODERN SPECIES 3 ENSACCG00020014674 SPATA46 (ENSACCG00020014688) TMEM121 (ENSACCG00020014698) TEDC1 (ENSACCG00020014715) CRIP1 (ENSACCG00020014733) CRIP2 (ENSACCG00020014742) MTA1 (ENSACCG00020014761) PACS2 (ENSACCG00020014813) SEC22B (ENSACCG00020014855) NOTCH2 (ENSACCG00020015594) REG4 (ENSACCG00020016143) HMGCS2 (ENSACCG00020016155) PHGDH (ENSACCG00020016168) ENSACCG00020016188 ##22 ENSACCG00020016199 ##22 ENSACCG00020016209 ##22 PRKAB2 (ENSACCG00020016217) ENSACCG00020016234 ENSACCG00020016245 PLPP6 (ENSACCG00020016252) FAM78B (ENSACCG00020016256) PRDX6 (ENSACCG00020016260) TADA1 (ENSACCG00020000569) ENSACCG00020000599 ENSACCG00020000626 FASLG (ENSACCG00020000653) SUCO (ENSACCG00020000747) PIGC (ENSACCG00020000792) DNM3 (ENSACCG00020000818) METTL13 (ENSACCG00020000863) ITPA (ENSACCG00020000889) Golden eagle MODERN SPECIES 3 ENSACCG00020014657 ENSACCG00020014674 SPATA46 (ENSACCG00020014688) TMEM121 (ENSACCG00020014698) TEDC1 (ENSACCG00020014715) CRIP1 (ENSACCG00020014733) CRIP2 (ENSACCG00020014742) MTA1 (ENSACCG00020014761) PACS2 (ENSACCG00020014813) SEC22B (ENSACCG00020014855) NOTCH2 (ENSACCG00020015594) REG4 (ENSACCG00020016143) HMGCS2 (ENSACCG00020016155) PHGDH (ENSACCG00020016168) ENSACCG00020016188 ##22 ENSACCG00020016199 ##22 ENSACCG00020016209 ##22 PRKAB2 (ENSACCG00020016217) ENSACCG00020016234 ENSACCG00020016245 PLPP6 (ENSACCG00020016252) FAM78B (ENSACCG00020016256) PRDX6 (ENSACCG00020016260) TADA1 (ENSACCG00020000569) ENSACCG00020000599 ENSACCG00020000626 FASLG (ENSACCG00020000653) SUCO (ENSACCG00020000747) PIGC (ENSACCG00020000792) DNM3 (ENSACCG00020000818) METTL13 (ENSACCG00020000863) Galloanserae ANCESTRAL SPECIES 8 ENSGT00940000164616 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 Anatidae ANCESTRAL SPECIES 5 ENSGT00940000164616 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT01040000240999 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Pink-footed goose MODERN SPECIES 84 UAP1 (ENSABRG00000022957) UHMK1 (ENSABRG00000022956) ENSABRG00000022955 ENSABRG00000022954 TMEM121 (ENSABRG00000022951) TEDC1 (ENSABRG00000022949) CRIP1 (ENSABRG00000022948) CRIP2 (ENSABRG00000022947) MTA1 (ENSABRG00000022946) ENSABRG00000022945 PACS2 (ENSABRG00000022944) SEC22B (ENSABRG00000022943) NOTCH2 (ENSABRG00000022942) HMGCS2 (ENSABRG00000022941) PHGDH (ENSABRG00000022940) ENSABRG00000022939 ##22 PRKAB2 (ENSABRG00000022938) ENSABRG00000022937 ENSABRG00000022936 PLPP6 (ENSABRG00000022935) FAM78B (ENSABRG00000022934) PRDX6 (ENSABRG00000022933) TADA1 (ENSABRG00000022932) ENSABRG00000022931 FASLG (ENSABRG00000022930) SUCO (ENSABRG00000022929) PIGC (ENSABRG00000022928) DNM3 (ENSABRG00000022835) METTL13 (ENSABRG00000022788) ITPA (ENSABRG00000022787) VAMP4 (ENSABRG00000022785) Duck MODERN SPECIES 26 ENSAPLG00000023414 ENSAPLG00000014905 TMEM121 (ENSAPLG00000013683) TEDC1 (ENSAPLG00000014968) CRIP1 (ENSAPLG00000014982) CRIP2 (ENSAPLG00000015110) MTA1 (ENSAPLG00000015316) PACS2 (ENSAPLG00000015577) SEC22B (ENSAPLG00000015847) NOTCH2 (ENSAPLG00000015861) HMGCS2 (ENSAPLG00000016193) ENSAPLG00000031083 PHGDH (ENSAPLG00000027527) ENSAPLG00000020859 ENSAPLG00000024527 ENSAPLG00000016209 ##22 ENSAPLG00000030221 ##22 PRKAB2 (ENSAPLG00000016261) ENSAPLG00000030988 ENSAPLG00000016309 PLPP6 (ENSAPLG00000029646) FAM78B (ENSAPLG00000016430) PRDX6 (ENSAPLG00000016432) TADA1 (ENSAPLG00000005434) ENSAPLG00000029878 FASLG (ENSAPLG00000005345) SUCO (ENSAPLG00000004827) PIGC (ENSAPLG00000001596) DNM3 (ENSAPLG00000004816) MYOC (ENSAPLG00000016603) PRRC2C (ENSAPLG00000003698) Phasianidae ANCESTRAL SPECIES 7 ENSGT00940000157769 ENSGT01070000257182 ENSGT00510000046975.b.q ENSGT00940000168828 ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00390000015127 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Japanese quail DUPLICATION Japanese quail DUPLICATION Japanese quail MODERN SPECIES 26 UAP1 (ENSCJPG00005021222) UHMK1 (ENSCJPG00005021223) ENSCJPG00005021224 ENSCJPG00005021225 TMEM121 (ENSCJPG00005021226) TEDC1 (ENSCJPG00005021227) CRIP1 (ENSCJPG00005021228) CRIP2 (ENSCJPG00005021229) MTA1 (ENSCJPG00005021230) PACS2 (ENSCJPG00005021231) SEC22B (ENSCJPG00005021243) NOTCH2 (ENSCJPG00005021260) HMGCS2 (ENSCJPG00005021290) ENSCJPG00005021292 ##22 ENSCJPG00005021293 ##22 ENSCJPG00005021294 ##22 PRKAB2 (ENSCJPG00005021295) ENSCJPG00005021296 ENSCJPG00005021297 PLPP6 (ENSCJPG00005021298) FAM78B (ENSCJPG00005021299) PRDX6 (ENSCJPG00005021300) TADA1 (ENSCJPG00005021301) ENSCJPG00005021303 APOBEC4 (ENSCJPG00005021304) ARPC5 (ENSCJPG00005021305) NCF2 (ENSCJPG00005021306) SMG7 (ENSCJPG00005021307) NMNAT2 (ENSCJPG00005021312) LAMC2 (ENSCJPG00005021314) LAMC1 (ENSCJPG00005021318) Japanese quail MODERN SPECIES 26 HSD17B7 (ENSCJPG00005021219) DDR2 (ENSCJPG00005021220) UAP1 (ENSCJPG00005021222) UHMK1 (ENSCJPG00005021223) ENSCJPG00005021224 ENSCJPG00005021225 TMEM121 (ENSCJPG00005021226) TEDC1 (ENSCJPG00005021227) CRIP1 (ENSCJPG00005021228) CRIP2 (ENSCJPG00005021229) MTA1 (ENSCJPG00005021230) PACS2 (ENSCJPG00005021231) SEC22B (ENSCJPG00005021243) NOTCH2 (ENSCJPG00005021260) HMGCS2 (ENSCJPG00005021290) ENSCJPG00005021292 ##22 ENSCJPG00005021293 ##22 ENSCJPG00005021294 ##22 PRKAB2 (ENSCJPG00005021295) ENSCJPG00005021296 ENSCJPG00005021297 PLPP6 (ENSCJPG00005021298) FAM78B (ENSCJPG00005021299) PRDX6 (ENSCJPG00005021300) TADA1 (ENSCJPG00005021301) ENSCJPG00005021303 APOBEC4 (ENSCJPG00005021304) ARPC5 (ENSCJPG00005021305) NCF2 (ENSCJPG00005021306) SMG7 (ENSCJPG00005021307) NMNAT2 (ENSCJPG00005021312) Japanese quail MODERN SPECIES 26 DDR2 (ENSCJPG00005021220) UAP1 (ENSCJPG00005021222) UHMK1 (ENSCJPG00005021223) ENSCJPG00005021224 ENSCJPG00005021225 TMEM121 (ENSCJPG00005021226) TEDC1 (ENSCJPG00005021227) CRIP1 (ENSCJPG00005021228) CRIP2 (ENSCJPG00005021229) MTA1 (ENSCJPG00005021230) PACS2 (ENSCJPG00005021231) SEC22B (ENSCJPG00005021243) NOTCH2 (ENSCJPG00005021260) HMGCS2 (ENSCJPG00005021290) ENSCJPG00005021292 ##22 ENSCJPG00005021293 ##22 ENSCJPG00005021294 ##22 PRKAB2 (ENSCJPG00005021295) ENSCJPG00005021296 ENSCJPG00005021297 PLPP6 (ENSCJPG00005021298) FAM78B (ENSCJPG00005021299) PRDX6 (ENSCJPG00005021300) TADA1 (ENSCJPG00005021301) ENSCJPG00005021303 APOBEC4 (ENSCJPG00005021304) ARPC5 (ENSCJPG00005021305) NCF2 (ENSCJPG00005021306) SMG7 (ENSCJPG00005021307) NMNAT2 (ENSCJPG00005021312) LAMC2 (ENSCJPG00005021314) Phasianidae_b ANCESTRAL SPECIES 7 ENSGT00940000157769 ENSGT01070000257182 ENSGT00510000046975.b.q ENSGT00940000168828 ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00390000015127 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Chicken MODERN SPECIES 37 UHMK1 (ENSGALG00010013027) ENSGALG00010013036 ENSGALG00010013044 ENSGALG00010013056 TMEM121 (ENSGALG00010013137) TEDC1 (ENSGALG00010013144) CRIP1 (ENSGALG00010013158) CRIP2 (ENSGALG00010013212) MTA1 (ENSGALG00010013251) PACS2 (ENSGALG00010013265) SEC22B (ENSGALG00010013282) NOTCH2 (ENSGALG00010013323) REG4 (ENSGALG00010013342) HMGCS2 (ENSGALG00010013346) PHGDH (ENSGALG00010013380) PDE4DIP (ENSGALG00010013429) ##22 PRKAB2 (ENSGALG00010013451) ENSGALG00010014898 ENSGALG00010013472 PLPP6 (ENSGALG00010013486) FAM78B (ENSGALG00010013511) PRDX6 (ENSGALG00010013528) TADA1 (ENSGALG00010013553) ENSGALG00010013566 ENSGALG00010013573 FASLG (ENSGALG00010013583) SUCO (ENSGALG00010014928) PIGC (ENSGALG00010013609) DNM3 (ENSGALG00010013766) METTL13 (ENSGALG00010013793) ITPA (ENSGALG00010013848) Turkey DUPLICATION Turkey MODERN SPECIES 1 ENSMGAG00000004221 ENSMGAG00000018521 DNM3 (ENSMGAG00000021855) ENSMGAG00000004375 SUCO (ENSMGAG00000004336) ENSMGAG00000020431 ENSMGAG00000022425 ENSMGAG00000004387 ENSMGAG00000004398 ENSMGAG00000019588 ENSMGAG00000019333 ENSMGAG00000004417 ENSMGAG00000004411 ENSMGAG00000004481 ##22 ENSMGAG00000004460 ENSMGAG00000019615 ##22 ENSMGAG00000004604 ENSMGAG00000004592 ENSMGAG00000004570 ENSMGAG00000004553 ENSMGAG00000021888 ENSMGAG00000004771 ENSMGAG00000004881 ENSMGAG00000004786 ENSMGAG00000004954 ENSMGAG00000017246 ENSMGAG00000021550 ENSMGAG00000018164 ENSMGAG00000005017 ENSMGAG00000005039 ENSMGAG00000005025 Turkey MODERN SPECIES 1 ENSMGAG00000004182 ENSMGAG00000004161 ENSMGAG00000004221 ENSMGAG00000018521 DNM3 (ENSMGAG00000021855) ENSMGAG00000004375 SUCO (ENSMGAG00000004336) ENSMGAG00000020431 ENSMGAG00000022425 ENSMGAG00000004387 ENSMGAG00000004398 ENSMGAG00000019588 ENSMGAG00000019333 ENSMGAG00000004417 ENSMGAG00000004411 ENSMGAG00000004481 ##22 ENSMGAG00000004460 ENSMGAG00000019615 ##22 ENSMGAG00000004604 ENSMGAG00000004592 ENSMGAG00000004570 ENSMGAG00000004553 ENSMGAG00000021888 ENSMGAG00000004771 ENSMGAG00000004881 ENSMGAG00000004786 ENSMGAG00000004954 ENSMGAG00000017246 ENSMGAG00000021550 ENSMGAG00000018164 ENSMGAG00000005017 Cryptodira ANCESTRAL SPECIES 8 ENSGT00940000164616 ENSGT00390000007598 ENSGT00510000046975.b.p.b ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 Chinese turtle MODERN SPECIES 1747 ENSPSIG00000002630 ##22 Testudinoidea DUPLICATION Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000164616 ENSGT00390000007598 ENSGT00510000046975.b.p.b ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 Emydidae ANCESTRAL SPECIES 24 ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT00990000205100.A.a ENSGT00390000003866.a.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT01030000236207.a.a ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 97 ENSTMTG00000008120 ENSTMTG00000008130 SPATA46 (ENSTMTG00000008141) ENSTMTG00000008146 ENSTMTG00000008159 ENSTMTG00000008174 ENSTMTG00000008183 ENSTMTG00000008196 ENSTMTG00000008227 ENSTMTG00000008560 ENSTMTG00000013707 ENSTMTG00000013777 ENSTMTG00000014264 ENSTMTG00000019942 ENSTMTG00000019952 ENSTMTG00000019960 ##22 ENSTMTG00000019969 ##22 ENSTMTG00000020060 ENSTMTG00000020072 ENSTMTG00000020079 ENSTMTG00000020090 ENSTMTG00000020094 ENSTMTG00000020101 ENSTMTG00000020105 ENSTMTG00000020115 ENSTMTG00000020118 ENSTMTG00000020122 ENSTMTG00000020132 ENSTMTG00000020144 ENSTMTG00000020302 ENSTMTG00000020309 Three-toed box turtle MODERN SPECIES 99 ENSTMTG00000003100 ENSTMTG00000003114 ENSTMTG00000003131 ENSTMTG00000003148 ENSTMTG00000003168 ENSTMTG00000003196 ENSTMTG00000003204 ENSTMTG00000003218 ENSTMTG00000003278 ENSTMTG00000003429 ENSTMTG00000004645 ENSTMTG00000004791 ENSTMTG00000005012 ENSTMTG00000006780 ENSTMTG00000006788 ENSTMTG00000006821 ##22 ENSTMTG00000006853 ##22 ENSTMTG00000006935 ##22 ENSTMTG00000006948 ENSTMTG00000006966 ENSTMTG00000006986 ENSTMTG00000007003 ENSTMTG00000007012 ENSTMTG00000007029 ENSTMTG00000007061 ENSTMTG00000007079 ENSTMTG00000007099 ENSTMTG00000007113 ENSTMTG00000007167 ENSTMTG00000007198 ENSTMTG00000007507 Testudinidae ANCESTRAL SPECIES 23 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056.z Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 22 UAP1 (ENSGEVG00005004650) UHMK1 (ENSGEVG00005004702) ENSGEVG00005004724 SPATA46 (ENSGEVG00005004742) ENSGEVG00005004767 ENSGEVG00005004835 ENSGEVG00005004856 CRIP1 (ENSGEVG00005004878) CRIP2 (ENSGEVG00005004907) MTA1 (ENSGEVG00005005055) PACS2 (ENSGEVG00005005436) SEC22B (ENSGEVG00005005497) NOTCH2 (ENSGEVG00005005781) HMGCS2 (ENSGEVG00005006695) PHGDH (ENSGEVG00005006807) ENSGEVG00005006836 ##22 ENSGEVG00005006881 ##22 ENSGEVG00005006969 ##22 PRKAB2 (ENSGEVG00005006996) ENSGEVG00005007072 ENSGEVG00005007391 PLPP6 (ENSGEVG00005007664) FAM78B (ENSGEVG00005007688) ENSGEVG00005007702 TADA1 (ENSGEVG00005007719) ENSGEVG00005007733 ENSGEVG00005007755 FASLG (ENSGEVG00005007773) SUCO (ENSGEVG00005007819) DNM3 (ENSGEVG00005007973) METTL13 (ENSGEVG00005008159) Goode s thornscrub tortoise MODERN SPECIES 22 ENSGEVG00005004724 SPATA46 (ENSGEVG00005004742) ENSGEVG00005004767 ENSGEVG00005004835 ENSGEVG00005004856 CRIP1 (ENSGEVG00005004878) CRIP2 (ENSGEVG00005004907) MTA1 (ENSGEVG00005005055) PACS2 (ENSGEVG00005005436) SEC22B (ENSGEVG00005005497) NOTCH2 (ENSGEVG00005005781) HMGCS2 (ENSGEVG00005006695) PHGDH (ENSGEVG00005006807) ENSGEVG00005006836 ##22 ENSGEVG00005006881 ##22 ENSGEVG00005006969 ##22 PRKAB2 (ENSGEVG00005006996) ENSGEVG00005007072 ENSGEVG00005007391 PLPP6 (ENSGEVG00005007664) FAM78B (ENSGEVG00005007688) ENSGEVG00005007702 TADA1 (ENSGEVG00005007719) ENSGEVG00005007733 ENSGEVG00005007755 FASLG (ENSGEVG00005007773) SUCO (ENSGEVG00005007819) DNM3 (ENSGEVG00005007973) METTL13 (ENSGEVG00005008159) VAMP4 (ENSGEVG00005008184) MYOC (ENSGEVG00005008207) Abingdon island giant tortoise MODERN SPECIES 610 ENSCABG00000009753 SEC22B (ENSCABG00000009761) NOTCH2 (ENSCABG00000009788) HMGCS2 (ENSCABG00000010265) PHGDH (ENSCABG00000010286) ENSCABG00000010287 ENSCABG00000010288 ##22 Testudinoidea ANCESTRAL SPECIES 5 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056.z ENSGT00510000047399 ENSGT00940000155005 Testudinidae ANCESTRAL SPECIES 23 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056.z ENSGT00940000158056.y ENSGT00510000047399 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 2664 ENSCABG00000006884 ENSCABG00000006893 ENSCABG00000006899 ##22 ENSCABG00000006911 ##22 PRKAB2 (ENSCABG00000006912) Abingdon island giant tortoise MODERN SPECIES 2664 ENSCABG00000006884 ENSCABG00000006893 ENSCABG00000006899 ##22 ENSCABG00000006911 ##22 PRKAB2 (ENSCABG00000006912) Emydidae ANCESTRAL SPECIES 24 ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT00990000205100.A.a ENSGT00390000003866.a.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT01030000236207.a.a ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056.z ENSGT00510000047399 ENSGT00940000155005 painted turtle MODERN SPECIES 2399 SEC22B (ENSCPBG00000005072) NOTCH2 (ENSCPBG00000005048) HMGCS2 (ENSCPBG00000004143) PHGDH (ENSCPBG00000004080) PDE4DIP (ENSCPBG00000003991) ##22 PRKAB2 (ENSCPBG00000003950) ENSCPBG00000003724 ENSCPBG00000003668 ENSCPBG00000003645 PLPP6 (ENSCPBG00000003610) FAM78B (ENSCPBG00000003588) ENSCPBG00000003579 ENSCPBG00000003569 TADA1 (ENSCPBG00000003554) Testudinoidea ANCESTRAL SPECIES 5 ENSGT00390000007598 ENSGT00510000046975.b.p.b ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056.z Emydidae ANCESTRAL SPECIES 24 ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT00990000205100.A.a ENSGT00390000003866.a.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT01030000236207.a.a ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056.z Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 99 ENSTMTG00000003114 ENSTMTG00000003131 ENSTMTG00000003148 ENSTMTG00000003168 ENSTMTG00000003196 ENSTMTG00000003204 ENSTMTG00000003218 ENSTMTG00000003278 ENSTMTG00000003429 ENSTMTG00000004645 ENSTMTG00000004791 ENSTMTG00000005012 ENSTMTG00000006780 ENSTMTG00000006788 ENSTMTG00000006821 ##22 ENSTMTG00000006853 ##22 ENSTMTG00000006935 ##22 ENSTMTG00000006948 ENSTMTG00000006966 ENSTMTG00000006986 ENSTMTG00000007003 ENSTMTG00000007012 ENSTMTG00000007029 ENSTMTG00000007061 ENSTMTG00000007079 ENSTMTG00000007099 ENSTMTG00000007113 ENSTMTG00000007167 ENSTMTG00000007198 ENSTMTG00000007507 ENSTMTG00000007529 Three-toed box turtle MODERN SPECIES 97 ENSTMTG00000008130 SPATA46 (ENSTMTG00000008141) ENSTMTG00000008146 ENSTMTG00000008159 ENSTMTG00000008174 ENSTMTG00000008183 ENSTMTG00000008196 ENSTMTG00000008227 ENSTMTG00000008560 ENSTMTG00000013707 ENSTMTG00000013777 ENSTMTG00000014264 ENSTMTG00000019942 ENSTMTG00000019952 ENSTMTG00000019960 ##22 ENSTMTG00000019969 ##22 ENSTMTG00000020060 ENSTMTG00000020072 ENSTMTG00000020079 ENSTMTG00000020090 ENSTMTG00000020094 ENSTMTG00000020101 ENSTMTG00000020105 ENSTMTG00000020115 ENSTMTG00000020118 ENSTMTG00000020122 ENSTMTG00000020132 ENSTMTG00000020144 ENSTMTG00000020302 ENSTMTG00000020309 ENSTMTG00000020314 Testudinidae ANCESTRAL SPECIES 23 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b.mc.a ##22 ENSGT00950000183190.a.a.b.nc ##22 ENSGT00950000183190.a.a.b.mc.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160836.d.n.b ENSGT00940000160907 ENSGT00390000018059.b ENSGT00940000164279 ENSGT00390000011644 ENSGT00950000185229 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056.z ENSGT00940000158056.y Goode s thornscrub tortoise MODERN SPECIES 22 UHMK1 (ENSGEVG00005004702) ENSGEVG00005004724 SPATA46 (ENSGEVG00005004742) ENSGEVG00005004767 ENSGEVG00005004835 ENSGEVG00005004856 CRIP1 (ENSGEVG00005004878) CRIP2 (ENSGEVG00005004907) MTA1 (ENSGEVG00005005055) PACS2 (ENSGEVG00005005436) SEC22B (ENSGEVG00005005497) NOTCH2 (ENSGEVG00005005781) HMGCS2 (ENSGEVG00005006695) PHGDH (ENSGEVG00005006807) ENSGEVG00005006836 ##22 ENSGEVG00005006881 ##22 ENSGEVG00005006969 ##22 PRKAB2 (ENSGEVG00005006996) ENSGEVG00005007072 ENSGEVG00005007391 PLPP6 (ENSGEVG00005007664) FAM78B (ENSGEVG00005007688) ENSGEVG00005007702 TADA1 (ENSGEVG00005007719) ENSGEVG00005007733 ENSGEVG00005007755 FASLG (ENSGEVG00005007773) SUCO (ENSGEVG00005007819) DNM3 (ENSGEVG00005007973) METTL13 (ENSGEVG00005008159) VAMP4 (ENSGEVG00005008184) Lepidosauria ANCESTRAL SPECIES 62 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00390000008608 ENSGT00940000156906 ENSGT00390000001322 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 Episquamata ANCESTRAL SPECIES 1 ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00940000157769 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185631 ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00980000198621.c Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000165310 ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT01040000244782 ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000156111 Elapidae ANCESTRAL SPECIES 1 ENSGT00940000156906.f ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000160907 ENSGT00940000159284 Elapidae_a ANCESTRAL SPECIES 32 ENSGT00940000165310 ENSGT00940000156906.f ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00940000160907 ENSGT00940000159284 Acanthophiinae ANCESTRAL SPECIES 33 ENSGT00940000165310 ENSGT00940000156906.f ENSGT00940000156906.e ENSGT00390000008608 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00990000213446 ENSGT00940000160907 ENSGT00940000159284 Eastern brown snake MODERN SPECIES 21 ENSPTXG00000000739 MGST3 (ENSPTXG00000000741) ENSPTXG00000000744 ENSPTXG00000000746 TMEM121 (ENSPTXG00000000748) ENSPTXG00000000750 ENSPTXG00000000755 PIGC (ENSPTXG00000000758) SUCO (ENSPTXG00000000794) ENSPTXG00000001004 FASLG (ENSPTXG00000001008) ENSPTXG00000001011 ENSPTXG00000001013 ENSPTXG00000001014 PHGDH (ENSPTXG00000001021) ENSPTXG00000001027 ##22 ENSPTXG00000001033 ENSPTXG00000001037 PLPP6 (ENSPTXG00000001042) ENSPTXG00000001044 ENSPTXG00000001048 Mainland tiger snake MODERN SPECIES 162 ENSNSUG00000010702 MGST3 (ENSNSUG00000010703) TMEM121 (ENSNSUG00000010704) ENSNSUG00000010705 ENSNSUG00000010708 PIGC (ENSNSUG00000010713) SUCO (ENSNSUG00000010720) ENSNSUG00000010776 FASLG (ENSNSUG00000010777) ENSNSUG00000010779 ENSNSUG00000010780 ENSNSUG00000010781 ENSNSUG00000010784 PHGDH (ENSNSUG00000010786) ENSNSUG00000010788 ##22 ENSNSUG00000010791 ##22 ENSNSUG00000010794 ##22 ENSNSUG00000010795 ENSNSUG00000010797 ENSNSUG00000010799 ENSNSUG00000010800 PRKAB2 (ENSNSUG00000010803) Indian cobra MODERN SPECIES 2 FMO5 (ENSNNAG00000003353) ENSNNAG00000003382 ENSNNAG00000003511 ENSNNAG00000003779 ENSNNAG00000003828 MGST3 (ENSNNAG00000003866) ENSNNAG00000003900 TMEM121 (ENSNNAG00000003941) ENSNNAG00000003950 PIGC (ENSNNAG00000004008) SUCO (ENSNNAG00000004047) ENSNNAG00000004186 ENSNNAG00000004195 HMGCS2 (ENSNNAG00000004218) PHGDH (ENSNNAG00000004258) ENSNNAG00000004334 ##22 PRKAB2 (ENSNNAG00000004404) ENSNNAG00000004473 FAM78B (ENSNNAG00000004480) TMCO1 (ENSNNAG00000004505) ALDH9A1 (ENSNNAG00000004535) ENSNNAG00000004562 CRIP2 (ENSNNAG00000004578) SEC22B (ENSNNAG00000004603) ALOX5 (ENSNNAG00000004631) ENSNNAG00000004709 ENSNNAG00000004728 ENSNNAG00000004749 ENSNNAG00000004767 POLR3F (ENSNNAG00000004799) KAT14 (ENSNNAG00000004811) Lizard MODERN SPECIES 3 RC3H1 (ENSACAG00000015271) RABGAP1L (ENSACAG00000015106) MRPS14 (ENSACAG00000023212) CACYBP (ENSACAG00000015077) TNN (ENSACAG00000015034) ENSACAG00000044109 KIAA0040 (ENSACAG00000044461) ENSACAG00000035234 TNR (ENSACAG00000014785) COP1 (ENSACAG00000014695) PAPPA2 (ENSACAG00000014663) ASTN1 (ENSACAG00000014579) BRINP2 (ENSACAG00000014442) ENSACAG00000041205 ENSACAG00000034940 ##22 ENSACAG00000013127 ##22 ENSACAG00000041180 ENSACAG00000013182 ENSACAG00000026209 ENSACAG00000013296 TMCO1 (ENSACAG00000013299) ENSACAG00000036468 ENSACAG00000044987 ENSACAG00000041628 FAM78B (ENSACAG00000013367) ENSACAG00000039957 ENSACAG00000013380 CRIP1 (ENSACAG00000027899) CRIP2 (ENSACAG00000013460) MTA1 (ENSACAG00000013501) PACS2 (ENSACAG00000013636) Laterata ANCESTRAL SPECIES 52 ENSGT00390000008608 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00940000157769 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185631 ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b Argentine black and white tegu MODERN SPECIES 20 ENSSMRG00000023533 ENSSMRG00000023532 ENSSMRG00000023531 TMEM121 (ENSSMRG00000023530) SPATA46 (ENSSMRG00000023528) ENSSMRG00000023527 ENSSMRG00000023526 UHMK1 (ENSSMRG00000023525) PIGC (ENSSMRG00000023523) SUCO (ENSSMRG00000023522) FASLG (ENSSMRG00000023521) ENSSMRG00000023520 ENSSMRG00000023519 PHGDH (ENSSMRG00000023518) ENSSMRG00000023517 ##22 ENSSMRG00000023515 ##22 ENSSMRG00000023514 ##22 PRKAB2 (ENSSMRG00000023513) FMO5 (ENSSMRG00000023510) PLPP6 (ENSSMRG00000023511) ALOX5 (ENSSMRG00000023509) CRIP2 (ENSSMRG00000023508) TMCO1 (ENSSMRG00000023507) ALDH9A1 (ENSSMRG00000023506) CRIP1 (ENSSMRG00000023505) FAM78B (ENSSMRG00000023504) MARCHF8 (ENSSMRG00000023503) ENSSMRG00000023501 MGME1 (ENSSMRG00000023500) OVOL2 (ENSSMRG00000023499) KAT14 (ENSSMRG00000023498) Common wall lizard MODERN SPECIES 14 ENSPMRG00000007526 UHMK1 (ENSPMRG00000007515) ENSPMRG00000007502 PIGC (ENSPMRG00000007496) ENSPMRG00000007493 ENSPMRG00000007490 SUCO (ENSPMRG00000007446) ENSPMRG00000007433 FASLG (ENSPMRG00000007422) ENSPMRG00000007413 ENSPMRG00000007396 ENSPMRG00000007388 HMGCS2 (ENSPMRG00000007370) PHGDH (ENSPMRG00000007329) ENSPMRG00000007307 ##22 ENSPMRG00000007288 ##22 PRKAB2 (ENSPMRG00000007267) FMO5 (ENSPMRG00000007256) PLPP6 (ENSPMRG00000007245) ENSPMRG00000007240 FAM78B (ENSPMRG00000007235) UCK2 (ENSPMRG00000007224) TMCO1 (ENSPMRG00000007212) ENSPMRG00000007203 ALDH9A1 (ENSPMRG00000007174) CRIP1 (ENSPMRG00000007150) CRIP2 (ENSPMRG00000007135) ENSPMRG00000007130 PDIA4 (ENSPMRG00000007115) GLRX5 (ENSPMRG00000007107) ENSPMRG00000007099 tuatara MODERN SPECIES 746 CIZ1 (ENSSPUG00000015347) DNM1 (ENSSPUG00000015376) ENSSPUG00000015440 SWI5 (ENSSPUG00000015500) TRUB2 (ENSSPUG00000015515) COQ4 (ENSSPUG00000015526) SLC27A4 (ENSSPUG00000015536) URM1 (ENSSPUG00000015548) CFAP157 (ENSSPUG00000015602) PTRH1 (ENSSPUG00000000040) SEC22B (ENSSPUG00000000051) NOTCH2 (ENSSPUG00000000062) HMGCS2 (ENSSPUG00000000080) PHGDH (ENSSPUG00000000175) ENSSPUG00000000396 ##22 ENSSPUG00000000416 ##22 PRKAB2 (ENSSPUG00000000426) ENSSPUG00000000433 SIM2 (ENSSPUG00000000454) ENSSPUG00000000498 ENSSPUG00000000519 PIGP (ENSSPUG00000000596) ENSSPUG00000000603 VPS26C (ENSSPUG00000000615) DYRK1A (ENSSPUG00000000621) KCNJ6 (ENSSPUG00000000631) KCNJ15 (ENSSPUG00000000634) ERG (ENSSPUG00000000653) ETS2 (ENSSPUG00000000684) Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1526 ENSCMIG00000017835 nmnat2 (ENSCMIG00000017826) smg7 (ENSCMIG00000017614) ncf2 (ENSCMIG00000017513) ENSCMIG00000017512 ENSCMIG00000017509 arpc5b (ENSCMIG00000017504) pla2g4aa (ENSCMIG00000017464) ptgs2b (ENSCMIG00000017023) pdcb (ENSCMIG00000016854) ENSCMIG00000016848 kifap3b (ENSCMIG00000016823) ntmt2 (ENSCMIG00000016804) ENSCMIG00000016800 prrx1b (ENSCMIG00000016794) ENSCMIG00000016789 ##22 ENSCMIG00000016787 ##22 ENSCMIG00000016785 ##22 ENSCMIG00000016783 ##22 PRKAB2 (ENSCMIG00000016779) scyl3 (ENSCMIG00000016774) si:dkey-97o5.1 (ENSCMIG00000016772) si:dkey-51e6.1 (ENSCMIG00000016769) SELE (ENSCMIG00000016768) ENSCMIG00000016753 dusp12 (ENSCMIG00000016750) ENSCMIG00000016729 NPHS2 (ENSCMIG00000016707) ##9 ENSCMIG00000016701 ENSCMIG00000016694 soat1 (ENSCMIG00000016631) Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1585 ENSCMIG00000014410 fubp3 (ENSCMIG00000014403) ass1 (ENSCMIG00000014371) ak1 (ENSCMIG00000014354) ENSCMIG00000014353 ENSCMIG00000014351 #19 psmd5 (ENSCMIG00000014320) #18 ENSCMIG00000014306 ENSCMIG00000014303 ENSCMIG00000014300 ENSCMIG00000014297 ENSCMIG00000014295 ENSCMIG00000014294 ENSCMIG00000014291 znf618 (ENSCMIG00000014290) ENSCMIG00000014272 ##22 ENSCMIG00000014263 rpl28 (ENSCMIG00000014253) pdcl (ENSCMIG00000014250) ENSCMIG00000014247 ENSCMIG00000014246 ptgs1 (ENSCMIG00000014238) ENSCMIG00000014236 mrrf (ENSCMIG00000014234) rbm18 (ENSCMIG00000014232) lhx6a (ENSCMIG00000014229) morn5 (ENSCMIG00000014227) ndufa8 (ENSCMIG00000014224) ENSCMIG00000014221 edf1 (ENSCMIG00000014217) uap1l1 (ENSCMIG00000014206) Elephant shark MODERN SPECIES 1526 nmnat2 (ENSCMIG00000017826) smg7 (ENSCMIG00000017614) ncf2 (ENSCMIG00000017513) ENSCMIG00000017512 ENSCMIG00000017509 arpc5b (ENSCMIG00000017504) pla2g4aa (ENSCMIG00000017464) ptgs2b (ENSCMIG00000017023) pdcb (ENSCMIG00000016854) ENSCMIG00000016848 kifap3b (ENSCMIG00000016823) ntmt2 (ENSCMIG00000016804) ENSCMIG00000016800 prrx1b (ENSCMIG00000016794) ENSCMIG00000016789 ##22 ENSCMIG00000016787 ##22 ENSCMIG00000016785 ##22 ENSCMIG00000016783 ##22 PRKAB2 (ENSCMIG00000016779) scyl3 (ENSCMIG00000016774) si:dkey-97o5.1 (ENSCMIG00000016772) si:dkey-51e6.1 (ENSCMIG00000016769) SELE (ENSCMIG00000016768) ENSCMIG00000016753 dusp12 (ENSCMIG00000016750) ENSCMIG00000016729 NPHS2 (ENSCMIG00000016707) ##9 ENSCMIG00000016701 ENSCMIG00000016694 soat1 (ENSCMIG00000016631) abl2 (ENSCMIG00000016574) Elephant shark MODERN SPECIES 1526 smg7 (ENSCMIG00000017614) ncf2 (ENSCMIG00000017513) ENSCMIG00000017512 ENSCMIG00000017509 arpc5b (ENSCMIG00000017504) pla2g4aa (ENSCMIG00000017464) ptgs2b (ENSCMIG00000017023) pdcb (ENSCMIG00000016854) ENSCMIG00000016848 kifap3b (ENSCMIG00000016823) ntmt2 (ENSCMIG00000016804) ENSCMIG00000016800 prrx1b (ENSCMIG00000016794) ENSCMIG00000016789 ##22 ENSCMIG00000016787 ##22 ENSCMIG00000016785 ##22 ENSCMIG00000016783 ##22 PRKAB2 (ENSCMIG00000016779) scyl3 (ENSCMIG00000016774) si:dkey-97o5.1 (ENSCMIG00000016772) si:dkey-51e6.1 (ENSCMIG00000016769) SELE (ENSCMIG00000016768) ENSCMIG00000016753 dusp12 (ENSCMIG00000016750) ENSCMIG00000016729 NPHS2 (ENSCMIG00000016707) ##9 ENSCMIG00000016701 ENSCMIG00000016694 soat1 (ENSCMIG00000016631) abl2 (ENSCMIG00000016574) tor3a (ENSCMIG00000016542) Vertebrata ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Protacanthopterygii ANCESTRAL SPECIES 43 ENSGT00940000158050 ENSGT00390000009230.b ENSGT00510000049027.d ENSGT00940000163253.b.c.a.b ENSGT01030000234567.B.a.a.b.b.a.a ENSGT00940000165622.i.a ENSGT00390000000719 ENSGT00390000004097.a.f ENSGT00390000012198.b.a ENSGT00390000002913 ENSGT00940000158163.b ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00950000183190.a.a.a.a.a.b ##22 ENSGT00950000183190.a.a.b.c.a ##22 ENSGT00950000183190.b ##22 ENSGT00950000183190.a.a.b.d ##22 ENSGT00940000159284 ENSGT00940000164927.b ENSGT00940000156132.g.c ENSGT00730000111085.B ENSGT00940000157064.a.b.b.a.b ENSGT00980000198596.C ENSGT00940000157064.a.b.a ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00940000155561.m ENSGT00950000182975.a.a.a.a.b ENSGT00990000204320 ENSGT00940000159706 Salmoninae ANCESTRAL SPECIES 111 ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00390000004674.i.a.h ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279 ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 ENSGT00940000157183.b.e ENSGT00940000157155.z Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000156911.j.b ENSGT00940000162992.f ENSGT00940000158186.g.c ENSGT00390000015162.e.a.a ENSGT00940000158156.b.a.e ENSGT00940000154621.a.b.b.b.e ENSGT00940000156744.o.a.a ENSGT00940000163253.b.c.a.b.a ENSGT00940000165622.i.a.a ENSGT00390000000719.u.a ENSGT00390000004097.a.f.d ENSGT00390000012198.b.a.a ENSGT00940000158649.a.b.i ENSGT00950000183190.a.a.a.a.a.b.n ##22 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284.m ENSGT00940000164927.b.e ENSGT00940000156132.g.c ENSGT00730000111085.B.i ENSGT00390000004674.i.a.h ENSGT00940000154254.b ENSGT00940000154667.b.b.e ENSGT00940000155561.m.d ENSGT00950000182975.a.a.a.a.b.a ENSGT01000000216279.a ENSGT00940000159706 ENSGT00940000154694 ENSGT00940000166623 ENSGT00940000157183.b.e ENSGT00940000157155.z Oncorhynchus ANCESTRAL SPECIES 725 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 Oncorhynchus_a ANCESTRAL SPECIES 845 ENSGT00950000183190.a.a.b.c.a.c ##22 ENSGT00950000183190.b ##22 Chinook salmon MODERN SPECIES 20 nkain4 (ENSOTSG00005016396) ENSOTSG00005016404 YTHDF1 (ENSOTSG00005016406) oxsr1a (ENSOTSG00005016409) FUBP3 (ENSOTSG00005016778) slc17a9b (ENSOTSG00005017253) gid8b (ENSOTSG00005017255) atp6ap1lb (ENSOTSG00005017256) ENSOTSG00005017257 ENSOTSG00005017258 ENSOTSG00005017259 ENSOTSG00005017261 ##22 ENSOTSG00005017262 ##22 PRKAB2 (ENSOTSG00005017266) ENSOTSG00005017268 eeig2a (ENSOTSG00005017528) prpf38b (ENSOTSG00005017529) ENSOTSG00005003035 ENSOTSG00005003044 WDR47 (ENSOTSG00005003065) CAMSAP2 (ENSOTSG00005003119) rnf114 (ENSOTSG00005003126) spata2 (ENSOTSG00005003128) ENSOTSG00005003133 aar2 (ENSOTSG00005003137) prpf6 (ENSOTSG00005003142) ENSOTSG00005003147 ENSOTSG00005003149 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Sauria ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Lepidosauria ANCESTRAL SPECIES 62 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00390000008608 ENSGT00940000156906 ENSGT00390000001322 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000164633 Episquamata ANCESTRAL SPECIES 1 ENSGT00390000003866.a.b ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00940000157769 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185631 ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.a.a.a.a ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00980000198621.c ENSGT00980000198621.d ENSGT00940000156111 Laterata ANCESTRAL SPECIES 52 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00940000157769 ENSGT00390000005496 ENSGT00390000013502.b ENSGT01060000248544.a.a.b.a.b ENSGT00950000185631 ENSGT00950000185229 ENSGT00390000014845 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.a.b ##22 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493 ENSGT00940000160907 ENSGT00390000018059.b ENSGT01020000230412.A.c.b.d ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162342 ENSGT00940000158683.b Argentine black and white tegu MODERN SPECIES 20 ENSSMRG00000023532 ENSSMRG00000023531 TMEM121 (ENSSMRG00000023530) SPATA46 (ENSSMRG00000023528) ENSSMRG00000023527 ENSSMRG00000023526 UHMK1 (ENSSMRG00000023525) PIGC (ENSSMRG00000023523) SUCO (ENSSMRG00000023522) FASLG (ENSSMRG00000023521) ENSSMRG00000023520 ENSSMRG00000023519 PHGDH (ENSSMRG00000023518) ENSSMRG00000023517 ##22 ENSSMRG00000023515 ##22 ENSSMRG00000023514 ##22 PRKAB2 (ENSSMRG00000023513) FMO5 (ENSSMRG00000023510) PLPP6 (ENSSMRG00000023511) ALOX5 (ENSSMRG00000023509) CRIP2 (ENSSMRG00000023508) TMCO1 (ENSSMRG00000023507) ALDH9A1 (ENSSMRG00000023506) CRIP1 (ENSSMRG00000023505) FAM78B (ENSSMRG00000023504) MARCHF8 (ENSSMRG00000023503) ENSSMRG00000023501 MGME1 (ENSSMRG00000023500) OVOL2 (ENSSMRG00000023499) KAT14 (ENSSMRG00000023498) ENSSMRG00000023497 Archelosauria ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Archosauria ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Aves ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Neognathae ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Neognathae_b ANCESTRAL SPECIES 10 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT01030000234573.B.d ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT01100000263594 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Neognathae_c ANCESTRAL SPECIES 7 ENSGT00940000164616 ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00390000003866.a.b ENSGT00390000011474 ENSGT00940000162342 ENSGT00940000158683.b ENSGT01030000234573.B.c.a ENSGT00950000183209.b.b ENSGT00940000156349 ENSGT00940000155030 ENSGT00940000161011 ENSGT00390000006096.a.a ENSGT00940000155863 ENSGT00950000183190.a.a.b ##22 ENSGT00950000183190.b ##22 ENSGT00940000159284 ENSGT00940000160493.b ENSGT00940000160493.a ENSGT00940000160907 ENSGT00390000018059.b ENSGT00550000074794 ENSGT00390000011644 ENSGT00940000172066 ENSGT00950000185631 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399 Kakapo MODERN SPECIES 25 ENSSHBG00005018306 TMEM121 (ENSSHBG00005018303) TEDC1 (ENSSHBG00005018300) CRIP1 (ENSSHBG00005018297) CRIP2 (ENSSHBG00005018294) MTA1 (ENSSHBG00005018289) PACS2 (ENSSHBG00005018285) SEC22B (ENSSHBG00005018280) NOTCH2 (ENSSHBG00005006669) ENSSHBG00005005608 HMGCS2 (ENSSHBG00005005589) PHGDH (ENSSHBG00005005502) ENSSHBG00005005481 ##22 ENSSHBG00005005457 ##22 ENSSHBG00005005436 ##22 ENSSHBG00005005423 ##22 PRKAB2 (ENSSHBG00005005402) ENSSHBG00005005380 ENSSHBG00005005361 ENSSHBG00005005329 ENSSHBG00005005304 ENSSHBG00005005286 ENSSHBG00005005270 ENSSHBG00005005259 ENSSHBG00005005246 PLPP6 (ENSSHBG00005000906) FAM78B (ENSSHBG00005000901) PRDX6 (ENSSHBG00005000895) TADA1 (ENSSHBG00005000887) ENSSHBG00005000873 FASLG (ENSSHBG00005000862) Mammalia ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Theria ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Primates ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Orangutan DUPLICATION Orangutan DUPLICATION Orangutan MODERN SPECIES HJV (ENSPPYG00000000925) ENSPPYG00000039140 ENSPPYG00000041067 ENSPPYG00000032826 PRKAB2 (ENSPPYG00000000943) ENSPPYG00000039259 FMO5 (ENSPPYG00000000944) CHD1L (ENSPPYG00000000946) ENSPPYG00000033902 BCL9 (ENSPPYG00000000947) ACP6 (ENSPPYG00000000948) GJA5 (ENSPPYG00000000949) GJA8 (ENSPPYG00000000951) ENSPPYG00000040487 PDE4DIP (ENSPPYG00000030940) ##22 ENSPPYG00000000952 ##22 ENSPPYG00000041334 ENSPPYG00000000953 ENSPPYG00000034414 ##22 ENSPPYG00000033178 ENSPPYG00000000924 ENSPPYG00000039570 ENSPPYG00000040768 ENSPPYG00000032672 ENSPPYG00000038344 ##22 ENSPPYG00000039543 FCGR1A (ENSPPYG00000019984) ENSPPYG00000031542 ENSPPYG00000032863 ENSPPYG00000036244 ENSPPYG00000036744 Orangutan MODERN SPECIES ENSPPYG00000032826 PRKAB2 (ENSPPYG00000000943) ENSPPYG00000039259 FMO5 (ENSPPYG00000000944) CHD1L (ENSPPYG00000000946) ENSPPYG00000033902 BCL9 (ENSPPYG00000000947) ACP6 (ENSPPYG00000000948) GJA5 (ENSPPYG00000000949) GJA8 (ENSPPYG00000000951) ENSPPYG00000040487 PDE4DIP (ENSPPYG00000030940) ##22 ENSPPYG00000000952 ##22 ENSPPYG00000041334 ENSPPYG00000000953 ENSPPYG00000034414 ##22 ENSPPYG00000033178 ENSPPYG00000000924 ENSPPYG00000039570 ENSPPYG00000040768 ENSPPYG00000032672 ENSPPYG00000038344 ##22 ENSPPYG00000039543 FCGR1A (ENSPPYG00000019984) ENSPPYG00000031542 ENSPPYG00000032863 ENSPPYG00000036244 ENSPPYG00000036744 ENSPPYG00000039474 ENSPPYG00000000922 H2BC21 (ENSPPYG00000000917) Orangutan MODERN SPECIES TXNIP (ENSPPYG00000000926) HJV (ENSPPYG00000000925) ENSPPYG00000039140 ENSPPYG00000041067 ENSPPYG00000032826 PRKAB2 (ENSPPYG00000000943) ENSPPYG00000039259 FMO5 (ENSPPYG00000000944) CHD1L (ENSPPYG00000000946) ENSPPYG00000033902 BCL9 (ENSPPYG00000000947) ACP6 (ENSPPYG00000000948) GJA5 (ENSPPYG00000000949) GJA8 (ENSPPYG00000000951) ENSPPYG00000040487 PDE4DIP (ENSPPYG00000030940) ##22 ENSPPYG00000000952 ##22 ENSPPYG00000041334 ENSPPYG00000000953 ENSPPYG00000034414 ##22 ENSPPYG00000033178 ENSPPYG00000000924 ENSPPYG00000039570 ENSPPYG00000040768 ENSPPYG00000032672 ENSPPYG00000038344 ##22 ENSPPYG00000039543 FCGR1A (ENSPPYG00000019984) ENSPPYG00000031542 ENSPPYG00000032863 ENSPPYG00000036244 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Pan ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Chimpanzee MODERN SPECIES 509 ENSPTRG00000045836 ##22 ENSPTRG00000051039 Bonobo MODERN SPECIES RBM15 (ENSPPAG00000041967) ENSPPAG00000015163 ENSPPAG00000021403 ENSPPAG00000031411 SLC6A17 (ENSPPAG00000042325) UBL4B (ENSPPAG00000025188) ALX3 (ENSPPAG00000042465) STRIP1 (ENSPPAG00000031474) ENSPPAG00000027525 CSF1 (ENSPPAG00000042763) GSTM3 (ENSPPAG00000027162) GSTM1 (ENSPPAG00000034147) ENSPPAG00000027857 ENSPPAG00000033589 ENSPPAG00000033138 ENSPPAG00000028195 ##22 ENSPPAG00000028949 ENSPPAG00000042737 ENSPPAG00000028256 ENSPPAG00000020771 ENSPPAG00000029215 ENSPPAG00000034850 ENSPPAG00000032403 ENSPPAG00000036804 FCGR1A (ENSPPAG00000039866) H2BC18 (ENSPPAG00000020072) H3-7 (ENSPPAG00000023295) H2BC21 (ENSPPAG00000025024) H2AC20 (ENSPPAG00000022736) H2AC21 (ENSPPAG00000019861) BOLA1 (ENSPPAG00000025235) Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Rhinopithecus ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Black snub-nosed monkey MODERN SPECIES 2260 ENSRBIG00000039937 ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Cetacea ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Odontoceti ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Monodontidae ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Beluga whale MODERN SPECIES 74 PIAS3 (ENSDLEG00000012119) NUDT17 (ENSDLEG00000012106) POLR3C (ENSDLEG00000012058) RNF115 (ENSDLEG00000012048) PDZK1 (ENSDLEG00000012026) ENSDLEG00000012011 GJA8 (ENSDLEG00000012004) GJA5 (ENSDLEG00000012001) ACP6 (ENSDLEG00000011988) BCL9 (ENSDLEG00000011971) CHD1L (ENSDLEG00000010686) PRKAB2 (ENSDLEG00000010556) ENSDLEG00000010535 ENSDLEG00000010528 ENSDLEG00000010519 ENSDLEG00000010511 ##22 PDE4DIP (ENSDLEG00000009003) ##22 SEC22B (ENSDLEG00000008747) NOTCH2 (ENSDLEG00000008673) HMGCS2 (ENSDLEG00000008595) PHGDH (ENSDLEG00000008553) ZNF697 (ENSDLEG00000008534) ENSDLEG00000008503 HAO2 (ENSDLEG00000008484) WARS2 (ENSDLEG00000008432) TBX15 (ENSDLEG00000008335) SPAG17 (ENSDLEG00000008058) WDR3 (ENSDLEG00000007988) GDAP2 (ENSDLEG00000007964) FAM46C (ENSDLEG00000007955) MAN1A2 (ENSDLEG00000007933) Camelidae ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Alpaca MODERN SPECIES 2207 PDE4DIP (ENSVPAG00000009232) ##22 ENSVPAG00000009231 ENSVPAG00000009230 ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Carnivora ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Caniformia ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00950000183190.b ##22 Mustelinae ANCESTRAL SPECIES ENSGT00950000183190.b ##22 American mink MODERN SPECIES 489 HAO2 (ENSNVIG00000009307) ENSNVIG00000009295 ZNF697 (ENSNVIG00000009291) PHGDH (ENSNVIG00000009186) ENSNVIG00000009153 HMGCS2 (ENSNVIG00000009139) REG4 (ENSNVIG00000009112) ENSNVIG00000009081 NOTCH2 (ENSNVIG00000009002) SC22B (ENSNVIG00000008984) PDE4DIP (ENSNVIG00000008508) ##22 ENSNVIG00000008481 ##22