Sarcopterygii ANCESTRAL SPECIES 110 ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00390000002197 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336 #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 Tetrapoda ANCESTRAL SPECIES 72 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000174919 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 Amniota ANCESTRAL SPECIES 24 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000174919 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000166132 ENSGT00940000164144 ENSGT00940000165070 ENSGT00940000162554 Mammalia ANCESTRAL SPECIES 40 ENSGT00950000182887.C.b.b ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a.b ENSGT00390000002414 ENSGT01030000234582.f.a.a.a.a ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000154633 ENSGT00940000156916 ENSGT00940000166318 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000164144 Theria ANCESTRAL SPECIES 33 ENSGT01030000234582.f.a.a.b ENSGT01030000234582.f.a.a.a.a ENSGT00390000002414 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000162865 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000182962.a.b ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 Eutheria ANCESTRAL SPECIES 16 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000166108 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000166157 #36 ENSGT00940000165111 ENSGT00950000182925.D.a.b.a.a.a.b ##34 ENSGT00950000182925.D.a.b.b ##34 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000166108 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00950000182925.D.a.b.b ##34 ENSGT00390000004891 ENSGT00940000163673 ENSGT00940000162603 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000166108 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000163246 ENSGT00940000162502 ENSGT00950000182925.D.a.b.a.a.b ##34 Glires ANCESTRAL SPECIES 10 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000166108 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000163246 ENSGT00940000162502 ENSGT00950000182925.D.a.b.a.a.b ##34 Rodentia ANCESTRAL SPECIES 10 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000166108 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000166157 #36 ENSGT00940000165111 Rodentia_B ANCESTRAL SPECIES 16 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000166157 #36 Myomorpha ANCESTRAL SPECIES 6 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000166157 #36 ENSGT00940000163245 ENSGT00940000162070 ENSGT00890000139436.A.b Muroidea ANCESTRAL SPECIES 50 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000166157 #36 ENSGT00940000162988 ENSGT00940000163245 ENSGT00940000162070 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000166157 #36 ENSGT00940000162988 ENSGT00940000163245 ENSGT00940000162070 ENSGT00530000063666.b Cricetidae ANCESTRAL SPECIES 8 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000163245 ENSGT00940000162070 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 Cricetidae_B ANCESTRAL SPECIES 54 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 Northern American deer mouse MODERN SPECIES 475 Eda (ENSPEMG00000012939) #7 Nalf2 (ENSPEMG00000015427) #8 Pja1 (ENSPEMG00000018003) #9 Efnb1 (ENSPEMG00000029561) #10 Stard8 (ENSPEMG00000006401) #11 Yipf6 (ENSPEMG00000006259) #12 Ophn1 (ENSPEMG00000000716) #13 ENSPEMG00000024504 #14 Ar (ENSPEMG00000000264) #15 ENSPEMG00000024572 #16 Eda2r (ENSPEMG00000010048) #17 Pgr15l (ENSPEMG00000011660) #18 ENSPEMG00000029584 #19 Gpr165 (ENSPEMG00000027719) #20 Heph (ENSPEMG00000000424) #21 Hsf3 (ENSPEMG00000001674) #22 ENSPEMG00000028906 #23 Vsig4 (ENSPEMG00000005797) #24 Msn (ENSPEMG00000014831) #25 Las1l (ENSPEMG00000001210) #26 Zc3h12b (ENSPEMG00000030441) #27 ENSPEMG00000031140 #28 Zc4h2 (ENSPEMG00000026603) #29 Pfn5 (ENSPEMG00000030788) #30 Asb12 (ENSPEMG00000000256) #31 Amer1 (ENSPEMG00000012693) #32 Arhgef9 (ENSPEMG00000012933) #33 Spin4 (ENSPEMG00000002526) #34 ENSPEMG00000025830 #35 ENSPEMG00000026975 #36 Mageb11 (ENSPEMG00000008903) #37 Prairie vole MODERN SPECIES 360 Eda (ENSMOCG00000007633) #7 Nalf2 (ENSMOCG00000015548) #8 Pja1 (ENSMOCG00000013022) #9 Efnb1 (ENSMOCG00000019155) #10 Stard8 (ENSMOCG00000000274) #11 ENSMOCG00000000213 Yipf6 (ENSMOCG00000004509) #12 Ophn1 (ENSMOCG00000011502) #13 ENSMOCG00000018755 ENSMOCG00000001177 #15 ENSMOCG00000017157 #15 Eda2r (ENSMOCG00000020804) #17 Pgr15l (ENSMOCG00000004906) #18 Gpr165 (ENSMOCG00000003694) #20 Heph (ENSMOCG00000017685) #21 Hsf3 (ENSMOCG00000003224) #22 Vsig4 (ENSMOCG00000000197) #24 Msn (ENSMOCG00000010407) #25 ENSMOCG00000019602 Pbsn (ENSMOCG00000005173) Prkx (ENSMOCG00000003139) Tbl1x (ENSMOCG00000002063) ENSMOCG00000013562 ENSMOCG00000019029 Mageb16 (ENSMOCG00000002574) ENSMOCG00000018300 Cfap47 (ENSMOCG00000020168) ENSMOCG00000019110 Prrg1 (ENSMOCG00000015594) ENSMOCG00000018722 ENSMOCG00000008368 Cricetinae ANCESTRAL SPECIES 17 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00900000143655 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000163245 ENSGT00940000162070 ENSGT00530000063666.b ENSGT00910000144208.c ENSGT00940000159116 ENSGT00550000074801.g.b.d Chinese hamster chok1gshd MODERN SPECIES 33 Awat2 (ENSCGRG00001013715) Eda (ENSCGRG00001000080) #7 Nalf2 (ENSCGRG00001018522) #8 ENSCGRG00001010332 #9 ENSCGRG00001014800 Efnb1 (ENSCGRG00001017480) #10 Stard8 (ENSCGRG00001012866) #11 Yipf6 (ENSCGRG00001024929) #12 Ophn1 (ENSCGRG00001024034) #13 ENSCGRG00001020174 #15 ENSCGRG00001012004 #15 Eda2r (ENSCGRG00001002185) #17 Pgr15l (ENSCGRG00001024706) #18 Gpr165 (ENSCGRG00001000577) #20 Heph (ENSCGRG00001020044) #21 Hsf3 (ENSCGRG00001022240) #22 Vsig4 (ENSCGRG00001003428) #24 Msn (ENSCGRG00001024846) #25 ENSCGRG00001000800 Las1l (ENSCGRG00001023388) #26 Zc3h12b (ENSCGRG00001018643) #27 Zc4h2 (ENSCGRG00001023095) #29 ENSCGRG00001018722 ENSCGRG00001021223 Fthl17a (ENSCGRG00001004869) ENSCGRG00001016935 Tab3 (ENSCGRG00001020007) Gk (ENSCGRG00001012921) Tasl (ENSCGRG00001024295) Nr0b1 (ENSCGRG00001023306) ENSCGRG00001012714 Golden Hamster MODERN SPECIES 727 Otud6a (ENSMAUG00000004694) Awat2 (ENSMAUG00000003789) ENSMAUG00000021914 Eda (ENSMAUG00000011572) #7 Nalf2 (ENSMAUG00000019622) #8 Pja1 (ENSMAUG00000021969) #9 ENSMAUG00000010856 Efnb1 (ENSMAUG00000019581) #10 Stard8 (ENSMAUG00000008744) #11 Ophn1 (ENSMAUG00000000560) #13 Ar (ENSMAUG00000001501) #15 ENSMAUG00000012150 Eda2r (ENSMAUG00000008260) #17 Gpr165 (ENSMAUG00000004553) #20 Heph (ENSMAUG00000008450) #21 Hsf3 (ENSMAUG00000013538) #22 Vsig4 (ENSMAUG00000021950) #24 Msn (ENSMAUG00000006616) #25 Las1l (ENSMAUG00000012113) #26 Zc3h12b (ENSMAUG00000017800) #27 Zc4h2 (ENSMAUG00000016038) #29 Asb12 (ENSMAUG00000020593) #31 Amer1 (ENSMAUG00000020197) #32 ENSMAUG00000001213 Arhgef9 (ENSMAUG00000000943) #33 Spin4 (ENSMAUG00000002658) #34 Maged1 (ENSMAUG00000011809) Apoo (ENSMAUG00000009452) Murinae ANCESTRAL SPECIES 14 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000163245 ENSGT00940000162070 ENSGT00530000063666.b ENSGT00510000048637 Mus ANCESTRAL SPECIES 9 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000163245 ENSGT00940000162070 ENSGT00530000063666.b ENSGT00510000048637 Mus_A ANCESTRAL SPECIES 15 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000163245 ENSGT00940000162070 ENSGT00530000063666.b ENSGT00510000048637 Mus_B ANCESTRAL SPECIES 14 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000163245 ENSGT00940000162070 ENSGT00530000063666.b ENSGT00510000048637 Mouse MODERN SPECIES 37 Igbp1 (ENSMUSG00000031221) Otud6a (ENSMUSG00000051582) Awat2 (ENSMUSG00000031220) Eda (ENSMUSG00000059327) #7 Nalf2 (ENSMUSG00000071719) #8 Pja1 (ENSMUSG00000034403) #9 Efnb1 (ENSMUSG00000031217) #10 Stard8 (ENSMUSG00000031216) #11 Yipf6 (ENSMUSG00000047694) #12 Ophn1 (ENSMUSG00000031214) #13 Ar (ENSMUSG00000046532) #15 Eda2r (ENSMUSG00000034457) #17 Pgr15l (ENSMUSG00000031212) #18 Gpr165 (ENSMUSG00000031210) #20 Heph (ENSMUSG00000031209) #21 Hsf3 (ENSMUSG00000045802) #22 Vsig4 (ENSMUSG00000044206) #24 Msn (ENSMUSG00000031207) #25 Las1l (ENSMUSG00000057421) #26 Zc3h12b (ENSMUSG00000035045) #27 Zc4h2 (ENSMUSG00000035062) #29 Pfn5 (ENSMUSG00000109858) #30 Asb12 (ENSMUSG00000031204) #31 Amer1 (ENSMUSG00000050332) #32 Arhgef9 (ENSMUSG00000025656) #33 Spin4 (ENSMUSG00000071722) #34 Zxdb (ENSMUSG00000073062) Gspt2 (ENSMUSG00000071723) Maged1 (ENSMUSG00000025151) Apoo (ENSMUSG00000079508) Fam90a1b (ENSMUSG00000043549) Mus_C ANCESTRAL SPECIES 22 ENSGT01030000234582.f.a.a.a.a ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517.y #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000163245 ENSGT00940000162070 ENSGT00530000063666.b ENSGT00510000048637 ENSGT00910000144208.c ENSGT00940000159116 spretus MODERN SPECIES 19 Igbp1 (MGP_SPRETEiJ_G0034432) Otud6a (MGP_SPRETEiJ_G0034431) Awat2 (MGP_SPRETEiJ_G0034430) Eda (MGP_SPRETEiJ_G0034429) #7 Nalf2 (MGP_SPRETEiJ_G0034428) #8 MGP_SPRETEiJ_G0034427 #9 Efnb1 (MGP_SPRETEiJ_G0034426) #10 Stard8 (MGP_SPRETEiJ_G0034425) #11 Yipf6 (MGP_SPRETEiJ_G0034424) #12 Ophn1 (MGP_SPRETEiJ_G0034423) #13 Ar (MGP_SPRETEiJ_G0034422) #15 Eda2r (MGP_SPRETEiJ_G0034421) #17 Pgr15l (MGP_SPRETEiJ_G0034420) #18 Gpr165 (MGP_SPRETEiJ_G0034419) #20 Heph (MGP_SPRETEiJ_G0034418) #21 MGP_SPRETEiJ_G0034417 #22 Vsig4 (MGP_SPRETEiJ_G0034416) #24 Msn (MGP_SPRETEiJ_G0034415) #25 Las1l (MGP_SPRETEiJ_G0034414) #26 Zc3h12b (MGP_SPRETEiJ_G0034413) #27 Zc4h2 (MGP_SPRETEiJ_G0034412) #29 MGP_SPRETEiJ_G0034411 MGP_SPRETEiJ_G0034410 Amer1 (MGP_SPRETEiJ_G0034409) #32 Arhgef9 (MGP_SPRETEiJ_G0034408) #33 Spin4 (MGP_SPRETEiJ_G0034407) #34 Gspt2 (MGP_SPRETEiJ_G0034406) Maged1 (MGP_SPRETEiJ_G0034405) Apoo (MGP_SPRETEiJ_G0034404) Fam90a1b (MGP_SPRETEiJ_G0034403) Klhl15 (MGP_SPRETEiJ_G0034402) Ryukyu mouse MODERN SPECIES 19 Otud6a (MGP_CAROLIEiJ_G0033267) Awat2 (MGP_CAROLIEiJ_G0033266) Eda (MGP_CAROLIEiJ_G0033265) #7 Nalf2 (MGP_CAROLIEiJ_G0033264) #8 Pja1 (MGP_CAROLIEiJ_G0033263) #9 Efnb1 (MGP_CAROLIEiJ_G0033262) #10 Stard8 (MGP_CAROLIEiJ_G0033261) #11 Yipf6 (MGP_CAROLIEiJ_G0033260) #12 Ophn1 (MGP_CAROLIEiJ_G0033259) #13 Ar (MGP_CAROLIEiJ_G0033258) #15 Eda2r (MGP_CAROLIEiJ_G0033257) #17 Pgr15l (MGP_CAROLIEiJ_G0033256) #18 MGP_CAROLIEiJ_G0033255 Gpr165 (MGP_CAROLIEiJ_G0033254) #20 Heph (MGP_CAROLIEiJ_G0033253) #21 Hsf3 (MGP_CAROLIEiJ_G0033252) #22 Vsig4 (MGP_CAROLIEiJ_G0033251) #24 Msn (MGP_CAROLIEiJ_G0033250) #25 Las1l (MGP_CAROLIEiJ_G0033249) #26 MGP_CAROLIEiJ_G0033248 MGP_CAROLIEiJ_G0033247 Zc4h2 (MGP_CAROLIEiJ_G0033246) #29 Asb12 (MGP_CAROLIEiJ_G0033245) #31 Amer1 (MGP_CAROLIEiJ_G0033244) #32 MGP_CAROLIEiJ_G0033243 MGP_CAROLIEiJ_G0033242 #33 Spin4 (MGP_CAROLIEiJ_G0033241) #34 MGP_CAROLIEiJ_G0033240 Gspt2 (MGP_CAROLIEiJ_G0033239) Maged1 (MGP_CAROLIEiJ_G0033238) Apoo (MGP_CAROLIEiJ_G0033237) Shrew mouse MODERN SPECIES 23 Igbp1 (MGP_PahariEiJ_G0031806) Otud6a (MGP_PahariEiJ_G0031805) Awat2 (MGP_PahariEiJ_G0031804) Eda (MGP_PahariEiJ_G0031803) #7 Nalf2 (MGP_PahariEiJ_G0031802) #8 Pja1 (MGP_PahariEiJ_G0031801) #9 Efnb1 (MGP_PahariEiJ_G0031800) #10 Stard8 (MGP_PahariEiJ_G0031799) #11 Yipf6 (MGP_PahariEiJ_G0031798) #12 Ophn1 (MGP_PahariEiJ_G0031797) #13 Ar (MGP_PahariEiJ_G0031796) #15 Eda2r (MGP_PahariEiJ_G0031795) #17 Pgr15l (MGP_PahariEiJ_G0031794) #18 Gpr165 (MGP_PahariEiJ_G0031793) #20 Heph (MGP_PahariEiJ_G0031792) #21 Hsf3 (MGP_PahariEiJ_G0031791) #22 Vsig4 (MGP_PahariEiJ_G0031790) #24 Msn (MGP_PahariEiJ_G0031789) #25 Las1l (MGP_PahariEiJ_G0031788) #26 Zc3h12b (MGP_PahariEiJ_G0031787) #27 Zc4h2 (MGP_PahariEiJ_G0031786) #29 Asb12 (MGP_PahariEiJ_G0031785) #31 MGP_PahariEiJ_G0031784 #32 Arhgef9 (MGP_PahariEiJ_G0031783) #33 Spin4 (MGP_PahariEiJ_G0031782) #34 Zxdb (MGP_PahariEiJ_G0031781) Gspt2 (MGP_PahariEiJ_G0031780) Maged1 (MGP_PahariEiJ_G0031779) Apoo (MGP_PahariEiJ_G0031778) Fam90a1b (MGP_PahariEiJ_G0031777) Klhl15 (MGP_PahariEiJ_G0031776) Rat MODERN SPECIES 46 Eda (ENSRNOG00000032208) #7 Nalf2 (ENSRNOG00000038066) #8 Pja1 (ENSRNOG00000047339) #9 Rpl27-l1 (ENSRNOG00000031517) Efnb1 (ENSRNOG00000006877) #10 Stard8 (ENSRNOG00000033883) #11 Yipf6 (ENSRNOG00000006642) #12 AABR07039112.1 (ENSRNOG00000022855) Ophn1 (ENSRNOG00000026573) #13 Ar (ENSRNOG00000005639) #15 Eda2r (ENSRNOG00000013018) #17 RGD1565058 (ENSRNOG00000042779) Pgr15l (ENSRNOG00000021547) #18 Gpr165 (ENSRNOG00000012995) #20 Heph (ENSRNOG00000012294) #21 LOC100360790 (ENSRNOG00000021694) #22 Vsig4 (ENSRNOG00000038132) #24 ENSRNOG00000070436 Msn (ENSRNOG00000030118) #25 Las1l (ENSRNOG00000021748) #26 Zc3h12b (ENSRNOG00000011508) #27 AABR07038957.1 (ENSRNOG00000054638) Got2-ps6 (ENSRNOG00000057091) Zc4h2 (ENSRNOG00000056735) #29 LOC102551431 (ENSRNOG00000066828) #30 Asb12 (ENSRNOG00000004197) #31 Amer1 (ENSRNOG00000007984) #32 Arhgef9 (ENSRNOG00000007733) #33 Spin4 (ENSRNOG00000038169) #34 Gmcl1-ps1 (ENSRNOG00000057644) #36 LOC120099132 (ENSRNOG00000067786) Upper Galilee mountains blind mole rat MODERN SPECIES 1263 Otud6a (ENSNGAG00000017316) Awat2 (ENSNGAG00000016871) Eda (ENSNGAG00000022131) #7 Nalf2 (ENSNGAG00000023932) #8 Pja1 (ENSNGAG00000023580) #9 Efnb1 (ENSNGAG00000023292) #10 Stard8 (ENSNGAG00000021823) #11 Yipf6 (ENSNGAG00000015569) #12 Ophn1 (ENSNGAG00000022814) #13 ENSNGAG00000001772 #15 ENSNGAG00000023586 #15 Eda2r (ENSNGAG00000020621) #17 Pgr15l (ENSNGAG00000017900) #18 Gpr165 (ENSNGAG00000013805) #20 Heph (ENSNGAG00000014739) #21 Hsf3 (ENSNGAG00000014517) #22 Msn (ENSNGAG00000018984) #25 Las1l (ENSNGAG00000015256) #26 ENSNGAG00000001158 Zc4h2 (ENSNGAG00000021684) #29 ENSNGAG00000013890 Amer1 (ENSNGAG00000010278) #32 Asb12 (ENSNGAG00000023819) #31 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000166108 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00950000182925.D.a.b.a.a.a.b ##34 ENSGT00390000004891 Hystricomorpha ANCESTRAL SPECIES 11 ENSGT01030000234582.f.a.a.b ENSGT01030000234582.f.a.a.a.a ENSGT00390000002414 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000162502 ENSGT00950000182925.D.a.b.a.a.b ##34 ENSGT00390000004891 ENSGT00940000162603 Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000050762 ENSHGLG00000000120 #13 ENSHGLG00000050877 ENSHGLG00000013918 ENSHGLG00000036627 ENSHGLG00000037280 ENSHGLG00000032367 ENSHGLG00000040031 ENSHGLG00000032600 ENSHGLG00000000186 #15 ENSHGLG00000009972 ENSHGLG00000044361 ENSHGLG00000003998 #20 ENSHGLG00000036194 HEPH (ENSHGLG00000001643) #21 ENSHGLG00000007957 #22 ENSHGLG00000019568 ENSHGLG00000044766 VSIG4 (ENSHGLG00000011027) #24 MSN (ENSHGLG00000001737) #25 ENSHGLG00000049705 ENSHGLG00000002770 #26 ENSHGLG00000044476 #26 ENSHGLG00000003107 #27 ENSHGLG00000020196 ENSHGLG00000037523 ENSHGLG00000046360 ENSHGLG00000042114 ENSHGLG00000005578 #29 ENSHGLG00000019822 #30 ASB12 (ENSHGLG00000000583) #31 Hystricomorpha_a ANCESTRAL SPECIES 51 ENSGT01030000234582.f.a.a.b ENSGT01030000234582.f.a.a.a.a ENSGT00390000002414 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00530000063529.B #32 ENSGT00940000153902.b #31 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000162988 ENSGT00940000162502 ENSGT00950000182925.D.a.b.a.a.b ##34 ENSGT00390000004891 ENSGT00940000162603 Guinea pig MODERN SPECIES 122 EDA2R (ENSCPOG00000012156) #17 HEPH (ENSCPOG00000014821) #21 ENSCPOG00000022752 #22 MSN (ENSCPOG00000007103) #25 LAS1L (ENSCPOG00000014261) #26 ENSCPOG00000030973 ENSCPOG00000019721 #29 ENSCPOG00000025026 #30 AMER1 (ENSCPOG00000007668) #32 ASB12 (ENSCPOG00000007670) #31 ARHGEF9 (ENSCPOG00000015150) #33 SPIN4 (ENSCPOG00000000975) #34 EFNB1 (ENSCPOG00000038836) #10 Sciuridae ANCESTRAL SPECIES 35 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000166108 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT01050000244818 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000164144 ENSGT00950000182925.D.a.b.a.b #34 Marmotini ANCESTRAL SPECIES 66 ENSGT00390000008808.d ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000008496.x.a.b ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT01050000244818.n ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000164144 ENSGT00950000182925.D.a.b.a.b #34 Marmotini_b ANCESTRAL SPECIES 98 ENSGT00390000008808.d ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000008496.x.a.b ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000164144 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000166157 #36 Squirrel MODERN SPECIES 235 OPHN1 (ENSSTOG00000013156) #13 AR (ENSSTOG00000021280) #15 EDA2R (ENSSTOG00000008369) #17 ENSSTOG00000022372 #18 ENSSTOG00000028241 #20 HEPH (ENSSTOG00000015310) #21 ENSSTOG00000021693 #22 VSIG4 (ENSSTOG00000002679) #24 MSN (ENSSTOG00000013341) #25 ENSSTOG00000033332 ENSSTOG00000023106 LAS1L (ENSSTOG00000028104) #26 ZC3H12B (ENSSTOG00000020962) #27 ZC4H2 (ENSSTOG00000020812) #29 ENSSTOG00000022000 #30 MTMR8 (ENSSTOG00000025360) ASB12 (ENSSTOG00000022386) #31 AMER1 (ENSSTOG00000014141) #32 ARHGEF9 (ENSSTOG00000026917) #33 ENSSTOG00000020597 SPIN4 (ENSSTOG00000020490) #34 Alpin marmot MODERN SPECIES 74 AWAT2 (ENSMMMG00000022113) EDA (ENSMMMG00000022117) #7 ENSMMMG00000022121 #8 PJA1 (ENSMMMG00000022128) #9 EFNB1 (ENSMMMG00000022134) #10 STARD8 (ENSMMMG00000022138) #11 YIPF6 (ENSMMMG00000022145) #12 OPHN1 (ENSMMMG00000022152) #13 ENSMMMG00000022173 ENSMMMG00000022177 AR (ENSMMMG00000022192) #15 EDA2R (ENSMMMG00000022202) #17 ENSMMMG00000022207 #18 ENSMMMG00000022208 #20 HEPH (ENSMMMG00000022210) #21 ENSMMMG00000022240 #22 VSIG4 (ENSMMMG00000022254) #24 ENSMMMG00000022266 ENSMMMG00000022267 #25 ENSMMMG00000022273 LAS1L (ENSMMMG00000022275) #26 ZC3H12B (ENSMMMG00000022296) #27 ENSMMMG00000022301 ZC4H2 (ENSMMMG00000022307) #29 ENSMMMG00000022311 ENSMMMG00000022313 ENSMMMG00000022323 #30 MTMR8 (ENSMMMG00000022325) ASB12 (ENSMMMG00000022346) #31 AMER1 (ENSMMMG00000022350) #32 ARHGEF9 (ENSMMMG00000022355) #33 Lagomorpha ANCESTRAL SPECIES 40 ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.b #18 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00970000194118 ENSGT00940000164144 ENSGT00950000182925.D.a.b.a.b #34 ENSGT00940000166157 #36 Rabbit MODERN SPECIES 1401 NALF2 (ENSOCUG00000008430) #8 ENSOCUG00000029887 PJA1 (ENSOCUG00000007244) #9 EFNB1 (ENSOCUG00000013726) #10 STARD8 (ENSOCUG00000010783) #11 YIPF6 (ENSOCUG00000014510) #12 ENSOCUG00000001901 OPHN1 (ENSOCUG00000007381) #13 ENSOCUG00000032785 AR (ENSOCUG00000003142) #15 ENSOCUG00000039136 EDA2R (ENSOCUG00000022282) #17 ENSOCUG00000022819 #18 ENSOCUG00000023386 #20 HEPH (ENSOCUG00000014866) #21 ENSOCUG00000022713 #22 VSIG4 (ENSOCUG00000004172) #24 ENSOCUG00000021042 ENSOCUG00000000149 #25 ENSOCUG00000024108 LAS1L (ENSOCUG00000006760) #26 ZC3H12B (ENSOCUG00000006130) #27 ZC4H2 (ENSOCUG00000013393) #29 ENSOCUG00000029232 ENSOCUG00000023259 #30 MTMR8 (ENSOCUG00000001617) ASB12 (ENSOCUG00000023698) #31 AMER1 (ENSOCUG00000001613) #32 ENSOCUG00000030864 ENSOCUG00000011267 #33 ENSOCUG00000027796 Primates ANCESTRAL SPECIES ENSGT00940000163549 #22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000163549 #22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000163549 #22 Lemuriformes_a ANCESTRAL SPECIES 95 ENSGT01030000234582.f.a.a.b ENSGT01030000234582.f.a.a.a.a ENSGT00390000002414 ENSGT00940000163556 ENSGT01030000234582.f.a.a.a.b ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000154585.b #9 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 Greater bamboo lemur MODERN SPECIES 637 ENSPSMG00000017483 #22 VSIG4 (ENSPSMG00000017520) #24 MSN (ENSPSMG00000017561) #25 Atlantogenata ANCESTRAL SPECIES 152 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000153664.A.b.a #30 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00950000182925.D.a.b.a.b #34 Xenarthra ANCESTRAL SPECIES 1512 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.a.a #25 Armadillo MODERN SPECIES 2754 ENSDNOG00000038280 ENSDNOG00000048985 #22 VSIG4 (ENSDNOG00000000776) #24 MSN (ENSDNOG00000019760) #25 Marsupialia ANCESTRAL SPECIES 44 ENSGT00940000156381.b.b ENSGT00940000163293.b ENSGT00940000160883 ENSGT00940000162034 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000159460 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516.o.a #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166318 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00940000162865 ENSGT00390000014785.u #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00390000008508.a ENSGT00950000183104.B.a.b.c.b Marsupialia_b ANCESTRAL SPECIES 34 ENSGT00390000010397.a ENSGT00940000156381.b.b ENSGT00940000163293.b ENSGT00940000160883 ENSGT00940000162034 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000159460 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516.o.a #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166318 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00940000162865 ENSGT00390000014785.u #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00390000008508.a ENSGT00950000183104.B.a.b.c.b Diprotodontia ANCESTRAL SPECIES 74 ENSGT00390000010397.a ENSGT00940000156381.b.b ENSGT00940000163293.b ENSGT00940000160883 ENSGT00940000162034 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000159460 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516.o.a #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166318 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785.u #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00390000008508.a ENSGT00950000183104.B.a.b.c.b Diprotodontia_a ANCESTRAL SPECIES 72 ENSGT00390000010397.a ENSGT00940000156381.b.b ENSGT00940000163293.b ENSGT00940000160883 ENSGT00940000162034 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000159460 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516.o.a #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336.c.a #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166318 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785.u #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00390000008508.a ENSGT00950000183104.B.a.b.c.b koala MODERN SPECIES 173 ATG4A (ENSPCIG00000006807) PSMD10 (ENSPCIG00000030593) MID2 (ENSPCIG00000030592) STARD8 (ENSPCIG00000023494) #11 YIPF6 (ENSPCIG00000023739) #12 ENSPCIG00000023742 OPHN1 (ENSPCIG00000035418) #13 ENSPCIG00000030972 ENSPCIG00000036121 #15 ENSPCIG00000011047 #17 ENSPCIG00000010428 ENSPCIG00000010425 ENSPCIG00000008191 #20 ENSPCIG00000009195 #21 ENSPCIG00000030748 #21 ENSPCIG00000020288 #22 ENSPCIG00000020285 #24 ENSPCIG00000020283 ENSPCIG00000020282 ##25 ENSPCIG00000020280 ENSPCIG00000020273 #26 ZC3H12B (ENSPCIG00000020264) #27 Common wonbat MODERN SPECIES 1102 ENSVURG00010004287 #15 ENSVURG00010004266 #17 ENSVURG00010004253 ENSVURG00010004233 #20 HEPH (ENSVURG00010004185) #21 ENSVURG00010004162 #22 ENSVURG00010004097 #24 ENSVURG00010004067 ##25 ENSVURG00010004056 ENSVURG00010004011 #26 ZC3H12B (ENSVURG00010003916) #27 ENSVURG00010003891 ZC4H2 (ENSVURG00010003881) #29 ENSVURG00010003870 ENSVURG00010003859 Tasmanian devil MODERN SPECIES 21 ENSSHAG00000030973 ENSSHAG00000030647 ENSSHAG00000032039 ENSSHAG00000011659 ATG4A (ENSSHAG00000012992) PSMD10 (ENSSHAG00000013315) ENSSHAG00000013756 ENSSHAG00000014378 #11 YIPF6 (ENSSHAG00000028786) #12 OPHN1 (ENSSHAG00000015639) #13 AR (ENSSHAG00000020690) #15 ENSSHAG00000021777 ENSSHAG00000008441 #17 ENSSHAG00000005289 #20 HEPH (ENSSHAG00000001746) #21 ENSSHAG00000032086 #22 ENSSHAG00000025531 #24 ENSSHAG00000002045 ENSSHAG00000028076 ##25 ENSSHAG00000026751 ENSSHAG00000002960 ENSSHAG00000005698 #26 ENSSHAG00000031230 ENSSHAG00000021696 ENSSHAG00000032072 ENSSHAG00000021562 ENSSHAG00000021274 ENSSHAG00000026577 ENSSHAG00000023345 ENSSHAG00000009757 ENSSHAG00000003123 Opossum MODERN SPECIES 627 ENSMODG00000011492 ENSMODG00000045883 ENSMODG00000011507 ENSMODG00000011584 ENSMODG00000027952 ATG4A (ENSMODG00000011603) PSMD10 (ENSMODG00000011621) ENSMODG00000027596 MID2 (ENSMODG00000011644) STARD8 (ENSMODG00000011680) #11 YIPF6 (ENSMODG00000011692) #12 OPHN1 (ENSMODG00000047154) #13 AR (ENSMODG00000012412) #15 EDA2R (ENSMODG00000012440) #17 ENSMODG00000012445 #20 ENSMODG00000027338 #22 ENSMODG00000043924 ENSMODG00000012459 #24 ENSMODG00000012465 ENSMODG00000012494 ##25 ENSMODG00000007462 ENSMODG00000022849 ENSMODG00000029017 ENSMODG00000050925 ENSMODG00000007539 ENSMODG00000022847 ENSMODG00000008043 ATP2B3 (ENSMODG00000008152) DUSP9 (ENSMODG00000008174) PNCK (ENSMODG00000008192) ENSMODG00000008271 Platypus MODERN SPECIES 17 ATP7A (ENSOANG00000002396) ENSOANG00000002391 MAGT1 (ENSOANG00000002394) ATRX (ENSOANG00000002389) ENSOANG00000044549 ENSOANG00000051207 ENSOANG00000044394 ENSOANG00000005514 ABCB7 (ENSOANG00000002026) RLIM (ENSOANG00000002027) SLC16A2 (ENSOANG00000002028) ENSOANG00000002030 ENSOANG00000049039 ENSOANG00000042390 HEPH (ENSOANG00000050469) #21 ENSOANG00000008146 #22 ENSOANG00000005339 #24 ENSOANG00000044670 ENSOANG00000050639 ENSOANG00000004900 ##25 ENSOANG00000002988 ENSOANG00000003054 #26 ZC3H12B (ENSOANG00000046285) #27 ZC4H2 (ENSOANG00000037537) #29 ENSOANG00000035582 ORNANAV1R3160 (ENSOANG00000039435) ENSOANG00000047085 ENSOANG00000042695 CHIC1 (ENSOANG00000037266) ENSOANG00000036870 ENSOANG00000002295 Sauria ANCESTRAL SPECIES 21 ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000174919 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00390000008508 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000166132 ENSGT00940000165070 ENSGT00940000162554 Lepidosauria ANCESTRAL SPECIES 182 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 Episquamata ANCESTRAL SPECIES 14 ENSGT00950000182962.a.b ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178 ENSGT00940000159568 ENSGT00940000159055 ENSGT00390000008820.f ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548.a ENSGT00940000166548.b ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000153168.A #12 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000160128 #10 ENSGT00940000161362 #8 ENSGT00730000111220 #7 ENSGT00940000165703 ENSGT00390000002414 Toxicofera ANCESTRAL SPECIES 91 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548.a ENSGT00940000166548.b ENSGT00940000160157 #13 ENSGT00940000155516 #15 Elapidae ANCESTRAL SPECIES 14 ENSGT00940000158517.ab.a #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548.a ENSGT00940000166548.b ENSGT00940000160157 #13 ENSGT00940000155516.t #15 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178 ENSGT00940000159568 ENSGT00940000159055 ENSGT00390000008820.f ENSGT00940000165070 Indian cobra MODERN SPECIES 13 HEPH (ENSNNAG00000014383) #21 ENSNNAG00000014436 #22 VSIG4 (ENSNNAG00000014460) #24 ENSNNAG00000014516 ENSNNAG00000014587 ##25 ENSNNAG00000014609 ENSNNAG00000014630 OPHN1 (ENSNNAG00000014703) #13 AR (ENSNNAG00000015241) #15 FGF16 (ENSNNAG00000015257) ATRX (ENSNNAG00000015454) MAGT1 (ENSNNAG00000017370) ENSNNAG00000017383 ATP7A (ENSNNAG00000017441) AMOT (ENSNNAG00000017602) ENSNNAG00000010162 ENSNNAG00000010248 Elapidae_a ANCESTRAL SPECIES 73 ENSGT00940000158517.ab.a #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548.a ENSGT00940000166548.b ENSGT00940000160157 #13 ENSGT00940000155516.t #15 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178 ENSGT00940000159568 ENSGT00940000159055 ENSGT00390000008820.f ENSGT00940000165070 ENSGT00390000003601.a Blue-lipped sea krait MODERN SPECIES 4592 ENSLLTG00000016012 #22 ENSLLTG00000016006 #24 Acanthophiinae ANCESTRAL SPECIES 20 ENSGT00940000157297.i ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000153404.a ENSGT00530000063000.a.b.a ENSGT00940000153991.a.a ENSGT00940000165066 ENSGT00940000160883 ENSGT00940000156381 ENSGT00940000155001.A ENSGT00940000157427 ENSGT00940000158517.ab.a #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548.b ENSGT00940000160157 #13 ENSGT00940000155516.t #15 ENSGT00990000212099 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00940000169795 ENSGT00940000159568 ENSGT00940000159055 ENSGT00390000008820.f ENSGT00940000165070 ENSGT00390000003601.a Mainland tiger snake MODERN SPECIES 64 ENSNSUG00000020606 SMARCA1 (ENSNSUG00000020605) ENSNSUG00000020604 RAB39B (ENSNSUG00000020603) VBP1 (ENSNSUG00000020602) ENSNSUG00000020601 GAB3 (ENSNSUG00000020600) PSMD10 (ENSNSUG00000020598) ATG4A (ENSNSUG00000020597) COL4A6 (ENSNSUG00000020596) ENSNSUG00000020595 IRS4 (ENSNSUG00000020594) KCNE5 (ENSNSUG00000020593) ACSL4 (ENSNSUG00000020592) HEPH (ENSNSUG00000020591) #21 ENSNSUG00000020590 #22 ENSNSUG00000020589 #24 Eastern brown snake MODERN SPECIES 20 ENSPTXG00000007759 ENSPTXG00000008851 ENSPTXG00000008852 RAB39B (ENSPTXG00000008853) VBP1 (ENSPTXG00000008855) ENSPTXG00000008857 GAB3 (ENSPTXG00000008861) PSMD10 (ENSPTXG00000008863) ATG4A (ENSPTXG00000008865) ENSPTXG00000008867 IRS4 (ENSPTXG00000000093) NXT2 (ENSPTXG00000000153) KCNE5 (ENSPTXG00000000173) ACSL4 (ENSPTXG00000000267) ENSPTXG00000000667 #21 ENSPTXG00000000674 #22 ENSPTXG00000000752 #24 ENSPTXG00000000757 ENSPTXG00000000760 ##25 ENSPTXG00000000763 OPHN1 (ENSPTXG00000000776) #13 AR (ENSPTXG00000000785) #15 ENSPTXG00000000790 FGF16 (ENSPTXG00000000820) ATRX (ENSPTXG00000001129) MAGT1 (ENSPTXG00000010227) ENSPTXG00000010228 ATP7A (ENSPTXG00000010229) AMOT (ENSPTXG00000010230) ENSPTXG00000010231 ENSPTXG00000010232 Lizard MODERN SPECIES 1077 ENSACAG00000003239 ENSACAG00000003255 ENSACAG00000038233 ENSACAG00000003351 #20 ENSACAG00000003376 #21 ENSACAG00000003529 #22 VSIG4 (ENSACAG00000003594) #24 ENSACAG00000003596 ENSACAG00000003626 ENSACAG00000003659 ##25 ENSACAG00000026096 ENSACAG00000003744 ENSACAG00000009628 #13 AR (ENSACAG00000009496) #15 ENSACAG00000007843 #11 ENSACAG00000007727 Laterata ANCESTRAL SPECIES 31 ENSGT00950000182962.a.b ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178 ENSGT00940000159568 ENSGT00940000159055 ENSGT00390000008820.f ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548.a ENSGT00940000166548.b ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000153168.A #12 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000160128 #10 ENSGT00940000161362 #8 ENSGT00730000111220 #7 ENSGT00940000164773 ENSGT00940000165703 Common wall lizard MODERN SPECIES 419 ZDHHC15 (ENSPMRG00000019257) ENSPMRG00000019250 FGF16 (ENSPMRG00000019245) ATRX (ENSPMRG00000019183) ENSPMRG00000019168 MAGT1 (ENSPMRG00000019151) ENSPMRG00000019139 ENSPMRG00000019135 ATP7A (ENSPMRG00000019130) AMOT (ENSPMRG00000019123) ENSPMRG00000019113 ENSPMRG00000019107 ENSPMRG00000019101 #20 ENSPMRG00000019096 #20 ENSPMRG00000019083 #21 ENSPMRG00000019077 #22 ENSPMRG00000019064 #24 ENSPMRG00000019059 ENSPMRG00000019055 ENSPMRG00000019037 ##25 ENSPMRG00000019026 ENSPMRG00000019022 ENSPMRG00000019008 ENSPMRG00000019001 OPHN1 (ENSPMRG00000018961) #13 AR (ENSPMRG00000023019) #15 ENSPMRG00000023017 ENSPMRG00000023015 ENSPMRG00000023010 #17 YIPF6 (ENSPMRG00000023007) #12 ENSPMRG00000023001 Argentine black and white tegu MODERN SPECIES 67 SLC16A2 (ENSSMRG00000012084) RLIM (ENSSMRG00000012082) NEXMIF (ENSSMRG00000012081) ABCB7 (ENSSMRG00000012010) UPRT (ENSSMRG00000012004) ZDHHC15 (ENSSMRG00000011995) FGF16 (ENSSMRG00000011987) ATRX (ENSSMRG00000006512) MAGT1 (ENSSMRG00000006438) ENSSMRG00000006417 ATP7A (ENSSMRG00000006409) AMOT (ENSSMRG00000006395) ENSSMRG00000006390 ENSSMRG00000006360 #20 HEPH (ENSSMRG00000006330) #21 ENSSMRG00000006313 #22 ENSSMRG00000006310 #24 ENSSMRG00000006295 ENSSMRG00000006288 ENSSMRG00000006287 ##25 ENSSMRG00000006285 ENSSMRG00000006284 OPHN1 (ENSSMRG00000006263) #13 AR (ENSSMRG00000006257) #15 EDA2R (ENSSMRG00000006242) #17 YIPF6 (ENSSMRG00000006235) #12 STARD8 (ENSSMRG00000006206) #11 ENSSMRG00000006183 EFNB1 (ENSSMRG00000006158) #10 ENSSMRG00000006155 NALF2 (ENSSMRG00000006148) #8 tuatara MODERN SPECIES 1926 HEPH (ENSSPUG00000019308) #21 ENSSPUG00000019307 #22 Archelosauria ANCESTRAL SPECIES 24 ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000174919 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00390000008508 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000166132 ENSGT00940000165070 ENSGT00940000162554 Archosauria ANCESTRAL SPECIES 15 ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000174919 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 Aves ANCESTRAL SPECIES 23 ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000174919 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 Neognathae ANCESTRAL SPECIES 22 ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000174919 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 Galloanserae ANCESTRAL SPECIES 21 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336 #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 Anatidae ANCESTRAL SPECIES 24 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336 #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000154633.ob ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 Pink-footed goose MODERN SPECIES 4 ENSABRG00000001797 ENSABRG00000001768 ENSABRG00000001756 EDA (ENSABRG00000001715) #7 NALF2 (ENSABRG00000001686) #8 EFNB1 (ENSABRG00000001665) #10 ENSABRG00000001554 STARD8 (ENSABRG00000001531) #11 YIPF6 (ENSABRG00000001483) #12 OPHN1 (ENSABRG00000001423) #13 AR (ENSABRG00000001379) #15 EDA2R (ENSABRG00000001348) #17 ENSABRG00000001323 #20 ENSABRG00000001298 #20 ENSABRG00000001226 #21 ENSABRG00000001157 #22 ENSABRG00000001058 #24 ENSABRG00000001035 #24 ENSABRG00000000972 ENSABRG00000000946 ENSABRG00000000912 ##25 LAS1L (ENSABRG00000000761) #26 ZC3H12B (ENSABRG00000000723) #27 ZC4H2 (ENSABRG00000021870) #29 Duck MODERN SPECIES 1 ENSAPLG00000008444 ENSAPLG00000008446 ENSAPLG00000008447 ENSAPLG00000018238 EDA (ENSAPLG00000018744) #7 NALF2 (ENSAPLG00000008456) #8 EFNB1 (ENSAPLG00000027844) #10 ENSAPLG00000016348 YIPF6 (ENSAPLG00000007545) #12 OPHN1 (ENSAPLG00000006763) #13 AR (ENSAPLG00000006566) #15 ENSAPLG00000006375 #17 ENSAPLG00000006354 #20 ENSAPLG00000006248 #20 HEPH (ENSAPLG00000005347) #21 ENSAPLG00000024594 #22 ENSAPLG00000026082 ENSAPLG00000004209 ##25 ENSAPLG00000003903 #26 ZC3H12B (ENSAPLG00000003874) #27 ZC4H2 (ENSAPLG00000022359) #29 Phasianidae ANCESTRAL SPECIES 2 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336 #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 Japanese quail MODERN SPECIES 22 ENSCJPG00005003051 ENSCJPG00005003049 ENSCJPG00005003044 ENSCJPG00005003042 EDA (ENSCJPG00005003040) #7 ENSCJPG00005003039 #8 EFNB1 (ENSCJPG00005003036) #10 ENSCJPG00005003031 STARD8 (ENSCJPG00005003026) #11 YIPF6 (ENSCJPG00005003021) #12 OPHN1 (ENSCJPG00005003007) #13 AR (ENSCJPG00005002994) #15 EDA2R (ENSCJPG00005002988) #17 ENSCJPG00005002985 #20 ENSCJPG00005002979 #21 ENSCJPG00005002973 #22 VSIG4 (ENSCJPG00005002969) #24 ENSCJPG00005002966 ENSCJPG00005002956 ENSCJPG00005002949 ENSCJPG00005002939 ##25 ENSCJPG00005002935 LAS1L (ENSCJPG00005002926) #26 ZC3H12B (ENSCJPG00005002914) #27 ZC4H2 (ENSCJPG00005002865) #29 Phasianidae_b ANCESTRAL SPECIES 27 ENSGT00390000008593.a ENSGT00940000159253 ENSGT00940000158645 ENSGT00940000156344 ENSGT00940000156950 ENSGT00420000029769.b ENSGT00390000012574 ENSGT00940000158241 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000154336 #20 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 Chicken MODERN SPECIES 33 ENSGALG00010017598 WNT11B (ENSGALG00010017584) ENSGALG00010017557 EDA (ENSGALG00010017553) #7 FAM155B (ENSGALG00010017551) #8 EFNB1 (ENSGALG00010014340) #10 RXFP2 (ENSGALG00010015843) STARD8 (ENSGALG00010015834) #11 YIPF6 (ENSGALG00010014407) #12 OPHN1 (ENSGALG00010014367) #13 AR (ENSGALG00010016880) #15 EDA2R (ENSGALG00010016872) #17 ENSGALG00010016853 #20 GPR83L (ENSGALG00010016850) #20 HEPH (ENSGALG00010016836) #21 HSF3 (ENSGALG00010016823) #22 VSIG4 (ENSGALG00010016807) #24 ENSGALG00010015370 ENSGALG00010015186 MSN (ENSGALG00010015091) ##25 LAS1L (ENSGALG00010015057) #26 ZC3H12B (ENSGALG00010015044) #27 ZC4H2 (ENSGALG00010015040) #29 Turkey MODERN SPECIES 29 IL13RA1 (ENSMGAG00000002980) DOCK11 (ENSMGAG00000002797) WDR44 (ENSMGAG00000002717) ENSMGAG00000002666 ENSMGAG00000002661 ENSMGAG00000006499 ENSMGAG00000021827 ENSMGAG00000014077 ENSMGAG00000000753 #29 ENSMGAG00000000759 #27 ENSMGAG00000000760 #26 ENSMGAG00000000771 ##25 ENSMGAG00000000800 ENSMGAG00000000806 ENSMGAG00000000809 #24 ENSMGAG00000000814 #22 ENSMGAG00000017054 #20 ENSMGAG00000000822 #21 ENSMGAG00000000873 #17 ENSMGAG00000000864 #20 ENSMGAG00000010900 #15 ENSMGAG00000010876 #13 ENSMGAG00000001183 #12 ENSMGAG00000019736 #11 ENSMGAG00000000885 ENSMGAG00000001145 #11 ENSMGAG00000001204 #10 ENSMGAG00000001229 #8 ENSMGAG00000001244 ENSMGAG00000001243 ENSMGAG00000001235 #7 Neognathae_b ANCESTRAL SPECIES 44 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000158517.ib #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 Neognathae_c ANCESTRAL SPECIES 29 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000158517.ib #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 Golden eagle MODERN SPECIES 13 ENSACCG00020011545 ENSACCG00020011513 EDA (ENSACCG00020011486) #7 NALF2 (ENSACCG00020011463) #8 EFNB1 (ENSACCG00020011441) #10 ENSACCG00020011434 ENSACCG00020011410 STARD8 (ENSACCG00020011375) #11 YIPF6 (ENSACCG00020011353) #12 OPHN1 (ENSACCG00020011327) #13 AR (ENSACCG00020011304) #15 EDA2R (ENSACCG00020011280) #17 ENSACCG00020011269 #20 ENSACCG00020011255 #20 HEPH (ENSACCG00020011229) #21 ENSACCG00020011207 #22 ENSACCG00020011200 #24 ENSACCG00020011183 ENSACCG00020011166 ENSACCG00020011158 ##25 LAS1L (ENSACCG00020011144) #26 ZC3H12B (ENSACCG00020011131) #27 ZC4H2 (ENSACCG00020011125) #29 Kakapo MODERN SPECIES 1 P2RY4 (ENSSHBG00005015894) ENSSHBG00005015898 ENSSHBG00005015902 ENSSHBG00005015906 ENSSHBG00005015908 EDA (ENSSHBG00005015912) #7 NALF2 (ENSSHBG00005015915) #8 EFNB1 (ENSSHBG00005015916) #10 STARD8 (ENSSHBG00005015931) #11 YIPF6 (ENSSHBG00005015941) #12 OPHN1 (ENSSHBG00005015949) #13 AR (ENSSHBG00005015965) #15 ENSSHBG00005015980 #20 ENSSHBG00005015992 #20 ENSSHBG00005016141 #21 ENSSHBG00005019299 #22 ENSSHBG00005019308 #24 ENSSHBG00005019326 ENSSHBG00005019330 ENSSHBG00005019333 ##25 ENSSHBG00005019340 LAS1L (ENSSHBG00005019342) #26 ZC3H12B (ENSSHBG00005019347) #27 ZC4H2 (ENSSHBG00005019354) #29 BRCC3 (ENSSHBG00005019360) ENSSHBG00005019366 FUNDC2 (ENSSHBG00005019374) F8 (ENSSHBG00005019435) MPP1 (ENSSHBG00005019647) DKC1 (ENSSHBG00005019649) ENSSHBG00005019655 Passeriformes ANCESTRAL SPECIES 33 ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00390000007870.g.b ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000174919 ENSGT00940000158517.ib #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00950000182941.b.a ENSGT00940000154833 ENSGT00940000153460.c.b ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476.d ENSGT00390000015476.c ENSGT00940000155028 Great tit MODERN SPECIES 24 ENSPMJG00000007916 ENSPMJG00000007917 ENSPMJG00000007918 EDA (ENSPMJG00000007920) #7 ENSPMJG00000007923 NALF2 (ENSPMJG00000007924) #8 EFNB1 (ENSPMJG00000007927) #10 STARD8 (ENSPMJG00000007940) #11 YIPF6 (ENSPMJG00000007941) #12 OPHN1 (ENSPMJG00000007942) #13 AR (ENSPMJG00000007948) #15 EDA2R (ENSPMJG00000007977) #17 ENSPMJG00000007979 #20 ENSPMJG00000007983 #20 ENSPMJG00000007985 #21 ENSPMJG00000007990 #22 ENSPMJG00000007993 #24 ENSPMJG00000008003 ENSPMJG00000008014 ENSPMJG00000008017 ##25 LAS1L (ENSPMJG00000008024) #26 ZC3H12B (ENSPMJG00000008029) #27 ZC4H2 (ENSPMJG00000008032) #29 MAP7D3 (ENSPMJG00000008039) FHL1 (ENSPMJG00000008059) SLC9A6 (ENSPMJG00000008070) MMGT1 (ENSPMJG00000009082) INTS6L (ENSPMJG00000009083) MOSPD1 (ENSPMJG00000009084) ENSPMJG00000009086 PABIR2 (ENSPMJG00000009087) Passeriformes_d ANCESTRAL SPECIES 34 ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00390000007870.g.b ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000174919 ENSGT00940000158517.ib #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00950000182941.b.a ENSGT00940000154833 ENSGT00940000153460.c.b.f ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476.d ENSGT00390000015476.c ENSGT00940000155028 Passeriformes_g ANCESTRAL SPECIES 23 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000174919 ENSGT00940000158517.ib #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00950000182941.b.a ENSGT00940000154833 ENSGT00940000153460.c.b.f ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476.d ENSGT00390000015476.c ENSGT00940000155028 Passeroidea ANCESTRAL SPECIES 25 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000158517.ib #21 ENSGT00940000163549 #22 ENSGT00390000001432 #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00950000182941.b.a ENSGT00940000154833 ENSGT00940000153460.c.b.f ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476.d ENSGT00390000015476.c ENSGT00940000155028 Common canary MODERN SPECIES 13 ENSSCAG00000000805 ENSSCAG00000000794 ENSSCAG00000000784 EDA (ENSSCAG00000000775) #7 ENSSCAG00000000767 NALF2 (ENSSCAG00000000762) #8 EFNB1 (ENSSCAG00000000734) #10 STARD8 (ENSSCAG00000000705) #11 YIPF6 (ENSSCAG00000000692) #12 OPHN1 (ENSSCAG00000000370) #13 AR (ENSSCAG00000000232) #15 EDA2R (ENSSCAG00000000180) #17 ENSSCAG00000000145 #20 ENSSCAG00000000122 #20 HEPH (ENSSCAG00000017381) #21 ENSSCAG00000017380 #22 VSIG4 (ENSSCAG00000017379) #24 ENSSCAG00000017376 ENSSCAG00000017375 ENSSCAG00000017374 ##25 LAS1L (ENSSCAG00000017373) #26 ZC3H12B (ENSSCAG00000017372) #27 ZC4H2 (ENSSCAG00000017371) #29 GPC3 (ENSSCAG00000017369) GPC4 (ENSSCAG00000017368) HS6ST2 (ENSSCAG00000017367) MBNL3 (ENSSCAG00000017366) RAP2C (ENSSCAG00000017365) FRMD7 (ENSSCAG00000017364) STK26 (ENSSCAG00000017363) PLS3 (ENSSCAG00000017362) Zebra finch MODERN SPECIES 26 ENSTGUG00000002678 ENSTGUG00000002683 EDA (ENSTGUG00000002685) #7 NALF2 (ENSTGUG00000021447) #8 ENSTGUG00000002696 EFNB1 (ENSTGUG00000024663) #10 ENSTGUG00000023604 STARD8 (ENSTGUG00000002706) #11 YIPF6 (ENSTGUG00000023575) #12 OPHN1 (ENSTGUG00000002739) #13 AR (ENSTGUG00000002760) #15 EDA2R (ENSTGUG00000027444) #17 ENSTGUG00000002791 #20 ENSTGUG00000021575 #20 HEPH (ENSTGUG00000002793) #21 ENSTGUG00000002805 #22 ENSTGUG00000002816 #24 ENSTGUG00000002814 #24 ENSTGUG00000002818 ENSTGUG00000022987 ENSTGUG00000002826 ##25 LAS1L (ENSTGUG00000002844) #26 ZC3H12B (ENSTGUG00000002846) #27 ZC4H2 (ENSTGUG00000029285) #29 MAP7D3 (ENSTGUG00000002861) FHL1 (ENSTGUG00000002863) SLC9A6 (ENSTGUG00000002865) MMGT1 (ENSTGUG00000022719) INTS6L (ENSTGUG00000002901) MOSPD1 (ENSTGUG00000002920) ENSTGUG00000002926 Medium ground finch MODERN SPECIES 159 P2RY4 (ENSGFOG00000008806) ENSGFOG00000008811 ENSGFOG00000008829 ENSGFOG00000008834 ENSGFOG00000008839 EDA (ENSGFOG00000008840) #7 EFNB1 (ENSGFOG00000008847) #10 STARD8 (ENSGFOG00000008862) #11 YIPF6 (ENSGFOG00000009206) #12 OPHN1 (ENSGFOG00000009211) #13 EDA2R (ENSGFOG00000009238) #17 ENSGFOG00000009246 #20 ENSGFOG00000009254 #20 ENSGFOG00000009265 #21 ENSGFOG00000009283 #22 ENSGFOG00000009296 ENSGFOG00000009301 ENSGFOG00000009305 ##25 LAS1L (ENSGFOG00000009316) #26 ZC3H12B (ENSGFOG00000009331) #27 ZC4H2 (ENSGFOG00000009339) #29 MAP7D3 (ENSGFOG00000009350) FHL1 (ENSGFOG00000009401) SLC9A6 (ENSGFOG00000009451) MMGT1 (ENSGFOG00000009735) INTS6L (ENSGFOG00000002461) MOSPD1 (ENSGFOG00000002480) ENSGFOG00000002489 PABIR2 (ENSGFOG00000002546) HPRT1 (ENSGFOG00000002682) Flycatcher MODERN SPECIES 23 ENSFALG00000027699 ENSFALG00000027804 EDA (ENSFALG00000004193) #7 ENSFALG00000004194 ENSFALG00000004096 #8 ENSFALG00000027463 ENSFALG00000004198 #10 STARD8 (ENSFALG00000004206) #11 YIPF6 (ENSFALG00000024972) #12 OPHN1 (ENSFALG00000004217) #13 AR (ENSFALG00000004225) #15 EDA2R (ENSFALG00000004231) #17 ENSFALG00000004238 #20 ENSFALG00000004244 #20 HEPH (ENSFALG00000004249) #21 ENSFALG00000004260 #22 ENSFALG00000026191 #24 ENSFALG00000004280 ENSFALG00000025002 ENSFALG00000004282 ##25 LAS1L (ENSFALG00000004287) #26 ZC3H12B (ENSFALG00000004293) #27 ZC4H2 (ENSFALG00000023165) #29 ENSFALG00000004301 FHL1 (ENSFALG00000004308) ENSFALG00000004309 ENSFALG00000023823 MMGT1 (ENSFALG00000004311) INTS6L (ENSFALG00000004314) MOSPD1 (ENSFALG00000024887) ENSFALG00000026585 African ostrich MODERN SPECIES 694 ENSSCUG00000013982 STARD8 (ENSSCUG00000013978) #11 YIPF6 (ENSSCUG00000013971) #12 OPHN1 (ENSSCUG00000013963) #13 AR (ENSSCUG00000013959) #15 EDA2R (ENSSCUG00000013957) #17 GPR83 (ENSSCUG00000013954) #20 ENSSCUG00000013952 #20 HEPH (ENSSCUG00000013949) #21 ENSSCUG00000013943 #22 ENSSCUG00000013937 #24 ENSSCUG00000013928 ENSSCUG00000013922 ENSSCUG00000013914 ##25 ENSSCUG00000013910 LAS1L (ENSSCUG00000013906) #26 ZC3H12B (ENSSCUG00000013903) #27 ZC4H2 (ENSSCUG00000013899) #29 Australian saltwater crocodile MODERN SPECIES 36 ENSCPRG00005009123 ENSCPRG00005009116 ENSCPRG00005009107 EDA (ENSCPRG00005009102) #7 NALF2 (ENSCPRG00005009097) #8 EFNB1 (ENSCPRG00005009087) #10 ENSCPRG00005009076 STARD8 (ENSCPRG00005009070) #11 YIPF6 (ENSCPRG00005009067) #12 OPHN1 (ENSCPRG00005009060) #13 AR (ENSCPRG00005009048) #15 EDA2R (ENSCPRG00005009044) #17 ENSCPRG00005009042 #20 ENSCPRG00005009040 #20 HEPH (ENSCPRG00005009033) #21 ENSCPRG00005009028 #22 ENSCPRG00005009019 #24 ENSCPRG00005009016 #24 ENSCPRG00005009014 ENSCPRG00005009012 ENSCPRG00005009005 ##25 ENSCPRG00005008998 LAS1L (ENSCPRG00005008978) #26 ENSCPRG00005008970 #27 ENSCPRG00005008963 #27 ZC4H2 (ENSCPRG00005008956) #29 Cryptodira ANCESTRAL SPECIES 29 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432.g #24 ENSGT00390000001432.h #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00390000008508 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000166132 ENSGT00940000165070 Testudinoidea ANCESTRAL SPECIES 24 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432.g #24 ENSGT00390000001432.h #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00390000008508 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000166132 ENSGT00940000165070 Emydidae ANCESTRAL SPECIES 32 ENSGT01030000234621.C.a.a.a ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432.g #24 ENSGT00390000001432.h #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00940000166548 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000166132 ENSGT00940000165070 ENSGT00940000162554 Three-toed box turtle MODERN SPECIES 61 ENSTMTG00000001260 ENSTMTG00000001237 EDA (ENSTMTG00000001218) #7 NALF2 (ENSTMTG00000001205) #8 EFNB1 (ENSTMTG00000001196) #10 ENSTMTG00000001182 STARD8 (ENSTMTG00000001152) #11 ENSTMTG00000001135 YIPF6 (ENSTMTG00000001111) #12 OPHN1 (ENSTMTG00000001039) #13 AR (ENSTMTG00000000983) #15 EDA2R (ENSTMTG00000000946) #17 ENSTMTG00000000893 #20 ENSTMTG00000000843 #20 HEPH (ENSTMTG00000000444) #21 ENSTMTG00000020495 #22 ENSTMTG00000020486 #24 ENSTMTG00000020480 #24 ENSTMTG00000020475 ENSTMTG00000020464 ##25 ENSTMTG00000020460 LAS1L (ENSTMTG00000020454) #26 ZC3H12B (ENSTMTG00000020445) #27 ZC4H2 (ENSTMTG00000020441) #29 ENSTMTG00000020433 MTMR8 (ENSTMTG00000020255) ASB12 (ENSTMTG00000020238) #31 AMER1 (ENSTMTG00000020212) #32 ARHGEF9 (ENSTMTG00000019994) #33 ENSTMTG00000019966 ENSTMTG00000019950 painted turtle MODERN SPECIES 822 ENSCPBG00000007298 STARD8 (ENSCPBG00000007286) #11 YIPF6 (ENSCPBG00000007267) #12 OPHN1 (ENSCPBG00000007247) #13 AR (ENSCPBG00000007235) #15 EDA2R (ENSCPBG00000007219) #17 ENSCPBG00000007212 #20 ENSCPBG00000007208 #20 HEPH (ENSCPBG00000007136) #21 ENSCPBG00000007089 #22 ENSCPBG00000007083 #24 ENSCPBG00000007078 #24 ENSCPBG00000007054 ENSCPBG00000007043 ENSCPBG00000007027 ##25 ENSCPBG00000007016 ENSCPBG00000007011 LAS1L (ENSCPBG00000006993) #26 ZC3H12B (ENSCPBG00000006983) #27 ZC4H2 (ENSCPBG00000006980) #29 ENSCPBG00000006975 ENSCPBG00000006968 ENSCPBG00000006962 GRAMD1A (ENSCPBG00000006943) SCN1B (ENSCPBG00000006928) Testudinidae ANCESTRAL SPECIES 21 ENSGT01030000234582.f.a.a ENSGT00390000002414 ENSGT00940000165703 ENSGT00940000164773 ENSGT00730000111220 #7 ENSGT00940000161362 #8 ENSGT00950000182878.b.a.f.a ENSGT00940000160128 #10 ENSGT00940000167491 ENSGT00950000183061.a.a.a.a.b #11 ENSGT00940000153168.A #12 ENSGT00940000160157 #13 ENSGT00940000155516 #15 ENSGT00940000153259.a.a.a #17 ENSGT00940000158517 #21 ENSGT00940000163549 #22 ENSGT00390000001432.g #24 ENSGT00390000001432.h #24 ENSGT00940000166142 ENSGT01090000260082.d.a.a.b ##25 ENSGT00390000014785 #26 ENSGT00940000159316 #27 ENSGT00390000018389 #29 ENSGT00390000008508 ENSGT00940000162717 ENSGT00940000153902.b #31 ENSGT00530000063529.B #32 ENSGT00940000154103.b #33 ENSGT00940000166132 ENSGT00940000165070 ENSGT00940000162554 Goode s thornscrub tortoise MODERN SPECIES 23 ENSGEVG00005009936 ENSGEVG00005009960 EDA (ENSGEVG00005009984) #7 NALF2 (ENSGEVG00005010003) #8 ENSGEVG00005010041 EFNB1 (ENSGEVG00005010084) #10 ENSGEVG00005010146 STARD8 (ENSGEVG00005010217) #11 YIPF6 (ENSGEVG00005010366) #12 OPHN1 (ENSGEVG00005010394) #13 AR (ENSGEVG00005010515) #15 EDA2R (ENSGEVG00005010722) #17 ENSGEVG00005010747 #20 ENSGEVG00005010783 #20 HEPH (ENSGEVG00005010948) #21 ENSGEVG00005011773 #22 ENSGEVG00005011813 #24 ENSGEVG00005011860 #24 ENSGEVG00005011941 ENSGEVG00005012119 ##25 LAS1L (ENSGEVG00005012148) #26 ZC3H12B (ENSGEVG00005012207) #27 ZC4H2 (ENSGEVG00005012271) #29 C8orf48 (ENSGEVG00005012298) ENSGEVG00005012327 MTMR8 (ENSGEVG00005012378) ASB12 (ENSGEVG00005012432) #31 AMER1 (ENSGEVG00005012446) #32 ARHGEF9 (ENSGEVG00005012564) #33 ENSGEVG00005012967 ENSGEVG00005013026 Abingdon island giant tortoise MODERN SPECIES 2542 ENSCABG00000012369 #15 EDA2R (ENSCABG00000012375) #17 ENSCABG00000012377 #20 ENSCABG00000012381 #20 HEPH (ENSCABG00000012399) #21 ENSCABG00000012735 #22 ENSCABG00000012736 #24 ENSCABG00000012737 #24 ENSCABG00000012742 ENSCABG00000012749 ##25 ENSCABG00000012750 #26 ENSCABG00000012751 #26 ZC3H12B (ENSCABG00000012753) #27 ZC4H2 (ENSCABG00000012755) #29 Chinese turtle MODERN SPECIES 2100 ENSPSIG00000009529 #20 HEPH (ENSPSIG00000010188) #21 ENSPSIG00000012313 #22 ENSPSIG00000012652 #24 ENSPSIG00000012869 #24 ENSPSIG00000013698 ENSPSIG00000013763 ENSPSIG00000014294 ENSPSIG00000014443 ##25 ENSPSIG00000016498 LAS1L (ENSPSIG00000016596) #26 ZC3H12B (ENSPSIG00000016853) #27 ENSPSIG00000000347 ZC4H2 (ENSPSIG00000016919) #29 C8orf48 (ENSPSIG00000017387) MTMR8 (ENSPSIG00000005656) ASB12 (ENSPSIG00000006666) #31 AMER1 (ENSPSIG00000006912) #32 Anura ANCESTRAL SPECIES 541 ENSGT00940000163549 #22 ENSGT01010000229640 Frog MODERN SPECIES 8 steep1 (ENSXETG00000020806) XB5873923 [provisional] (ENSXETG00000011511) stard8 (ENSXETG00000011512) #11 EDA2R (ENSXETG00000011522) #17 ENSXETG00000037810 ENSXETG00000046878 ar (ENSXETG00000005089) #15 ophn1 (ENSXETG00000005092) #13 yipf6 (ENSXETG00000005093) #12 ENSXETG00000005094 #20 gpr83 (ENSXETG00000037478) #20 ENSXETG00000037266 ENSXETG00000001393 ngrn (ENSXETG00000033474) hddc3 (ENSXETG00000009763) hsf3 (ENSXETG00000009764) #22 vsig4 (ENSXETG00000036128) ENSXETG00000038857 ENSXETG00000031331 ENSXETG00000046252 msn (ENSXETG00000009770) #25 XB5934217 [provisional] (ENSXETG00000030253) ENSXETG00000037026 ENSXETG00000034669 ENSXETG00000042922 mid2 (ENSXETG00000034770) ENSXETG00000043785 ENSXETG00000009620 clcn5 (ENSXETG00000002095) ENSXETG00000002097 ENSXETG00000030112 Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000023771 ENSLLEG00000023759 TMEM164 (ENSLLEG00000023713) AMMECR1 (ENSLLEG00000023627) CHRDL1 (ENSLLEG00000023476) ENSLLEG00000023408 PAK3 (ENSLLEG00000022806) CAPN6 (ENSLLEG00000022636) TSSK2 (ENSLLEG00000022584) DCX (ENSLLEG00000022490) SERTM2 (ENSLLEG00000022469) ENSLLEG00000022401 ALG13 (ENSLLEG00000021735) ENSLLEG00000021669 #20 ENSLLEG00000021645 ENSLLEG00000021520 #22 ENSLLEG00000021241 ENSLLEG00000021195 ENSLLEG00000021075 #24 ENSLLEG00000020955 #17 ENSLLEG00000020929 ENSLLEG00000020894 AR (ENSLLEG00000020805) #15 OPHN1 (ENSLLEG00000020337) #13 GUCY2F (ENSLLEG00000019788) IRS4 (ENSLLEG00000019441) ENSLLEG00000019337 PSMD10 (ENSLLEG00000026674) ATG4A (ENSLLEG00000026514) ENSLLEG00000026397 ENSLLEG00000026320 Coelacanth MODERN SPECIES 302 ENSLACG00000012166 steep1 (ENSLACG00000012468) ENSLACG00000013074 STARD8 (ENSLACG00000013457) #11 YIPF6 (ENSLACG00000014312) #12 OPHN1 (ENSLACG00000014452) #13 AR (ENSLACG00000015024) #15 ENSLACG00000015939 #20 ENSLACG00000016291 #20 HEPH (ENSLACG00000016535) #21 ENSLACG00000022562 #22 ENSLACG00000016752 #24 cyb5r3 (ENSLACG00000016901) endouc (ENSLACG00000016951) POLR3B (ENSLACG00000017054) RFX4 (ENSLACG00000017280) RIC8B (ENSLACG00000017518) ENSLACG00000017633 TMEM263 (ENSLACG00000017757) ENSLACG00000017942