Rodentia	ANCESTRAL SPECIES	9	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00990000203858	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT01050000244868.a.a.b.a.a ##13	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00730000114714	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00990000203858	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00990000203858	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00990000203858	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00990000203858	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Murinae	ANCESTRAL SPECIES	1	ENSGT00390000002738.a #7	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Mus	ANCESTRAL SPECIES	1	ENSGT00390000002738.a #7	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Mus_A	ANCESTRAL SPECIES		ENSGT00390000002738.a #7	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000002738.a #7	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Mouse	MODERN SPECIES	11	Phpt1 (ENSMUSG00000036504) #7	Mamdc4 (ENSMUSG00000026941) #8	Edf1 (ENSMUSG00000015092) #9	Traf2 (ENSMUSG00000026942) #10	Fbxw5 (ENSMUSG00000015095) #11	C8g (ENSMUSG00000015083) #12	Lcn12 (ENSMUSG00000026943) #13	Ptgds (ENSMUSG00000015090) #14	Clic3 (ENSMUSG00000015093) #15	Paxx (ENSMUSG00000047617) #16	Abca2 (ENSMUSG00000026944) #17	Fut7 (ENSMUSG00000036587) #18	Npdc1 (ENSMUSG00000015094) #19	Entpd2 (ENSMUSG00000015085) #20	Sapcd2 (ENSMUSG00000026955) #21	Uap1l1 (ENSMUSG00000026956) #22	Dpp7 (ENSMUSG00000026958) #23	Man1b1 (ENSMUSG00000036646) #24	Grin1 (ENSMUSG00000026959) #25	Lrrc26 (ENSMUSG00000026961) #26	Tmem210 (ENSMUSG00000026963) #27	Anapc2 (ENSMUSG00000026965) #28	Ssna1 (ENSMUSG00000026966) #29	Tprn (ENSMUSG00000048707) #30	Tmem203 (ENSMUSG00000078201) #31	Ndor1 (ENSMUSG00000115074) #32	Ndor1 (ENSMUSG00000006471) #33	Ndor1 (ENSMUSG00000115018) #34	Rnf208 (ENSMUSG00000044628) #35	Cysrt1 (ENSMUSG00000036731) #36	Rnf224 (ENSMUSG00000089953) #37
Mus_C	ANCESTRAL SPECIES		ENSGT00390000002738.a #7	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Steppe mouse	MODERN SPECIES	2889	Ajm1 (ENSMSIG00000022471)	Phpt1 (ENSMSIG00000022477) #7	Edf1 (ENSMSIG00000022614) #9	Traf2 (ENSMSIG00000022633) #10	Fbxw5 (ENSMSIG00000022664) #11	C8g (ENSMSIG00000022687) #12	Lcn12 (ENSMSIG00000022732) #13	Ptgds (ENSMSIG00000022773) #14	Paxx (ENSMSIG00000022794) #16	Clic3 (ENSMSIG00000022819) #15	Abca2 (ENSMSIG00000022845) #17	Fut7 (ENSMSIG00000022998) #18	Npdc1 (ENSMSIG00000023008) #19	Entpd2 (ENSMSIG00000023052) #20	Sapcd2 (ENSMSIG00000023070) #21	Uap1l1 (ENSMSIG00000023104) #22	Dpp7 (ENSMSIG00000023133) #23	Man1b1 (ENSMSIG00000023173) #24	Grin1 (ENSMSIG00000023294) #25	Lrrc26 (ENSMSIG00000023364) #26	Tmem210 (ENSMSIG00000023378) #27	Anapc2 (ENSMSIG00000023390) #28	Ssna1 (ENSMSIG00000023430) #29	Tprn (ENSMSIG00000023447) #30	Tmem203 (ENSMSIG00000023470) #31	Ndor1 (ENSMSIG00000023474) #33	Rnf208 (ENSMSIG00000023530) #35	Cysrt1 (ENSMSIG00000023536) #36	Rnf224 (ENSMSIG00000023541) #37	Slc34a3 (ENSMSIG00000023551)	Tubb4b (ENSMSIG00000023582)
spretus	MODERN SPECIES	11	Phpt1 (MGP_SPRETEiJ_G0024201) #7	Mamdc4 (MGP_SPRETEiJ_G0024200) #8	Edf1 (MGP_SPRETEiJ_G0024199) #9	Traf2 (MGP_SPRETEiJ_G0024198) #10	Fbxw5 (MGP_SPRETEiJ_G0024197) #11	C8g (MGP_SPRETEiJ_G0024196) #12	Lcn12 (MGP_SPRETEiJ_G0024195) #13	Ptgds (MGP_SPRETEiJ_G0024194) #14	Clic3 (MGP_SPRETEiJ_G0024193) #15	Paxx (MGP_SPRETEiJ_G0024192) #16	Abca2 (MGP_SPRETEiJ_G0024191) #17	Fut7 (MGP_SPRETEiJ_G0024190) #18	Npdc1 (MGP_SPRETEiJ_G0024189) #19	Entpd2 (MGP_SPRETEiJ_G0024188) #20	Sapcd2 (MGP_SPRETEiJ_G0024187) #21	Uap1l1 (MGP_SPRETEiJ_G0024186) #22	Dpp7 (MGP_SPRETEiJ_G0024185) #23	Man1b1 (MGP_SPRETEiJ_G0024184) #24	Lrrc26 (MGP_SPRETEiJ_G0024183) #26	Tmem210 (MGP_SPRETEiJ_G0024182) #27	Grin1 (MGP_SPRETEiJ_G0024181) #25	Anapc2 (MGP_SPRETEiJ_G0024180) #28	Ssna1 (MGP_SPRETEiJ_G0024179) #29	Tprn (MGP_SPRETEiJ_G0024178) #30	Tmem203 (MGP_SPRETEiJ_G0024177) #31	Ndor1 (MGP_SPRETEiJ_G0024176) #33	Rnf208 (MGP_SPRETEiJ_G0024175) #35	Cysrt1 (MGP_SPRETEiJ_G0024174) #36	Rnf224 (MGP_SPRETEiJ_G0024173) #37	Slc34a3 (MGP_SPRETEiJ_G0024172)	MGP_SPRETEiJ_G0024171
Ryukyu mouse	MODERN SPECIES	11	Phpt1 (MGP_CAROLIEiJ_G0023284) #7	Mamdc4 (MGP_CAROLIEiJ_G0023283) #8	Edf1 (MGP_CAROLIEiJ_G0023282) #9	Traf2 (MGP_CAROLIEiJ_G0023281) #10	Fbxw5 (MGP_CAROLIEiJ_G0023280) #11	C8g (MGP_CAROLIEiJ_G0023279) #12	Lcn12 (MGP_CAROLIEiJ_G0023278) #13	Ptgds (MGP_CAROLIEiJ_G0023277) #14	Clic3 (MGP_CAROLIEiJ_G0023276) #15	Paxx (MGP_CAROLIEiJ_G0023275) #16	Abca2 (MGP_CAROLIEiJ_G0023274) #17	Fut7 (MGP_CAROLIEiJ_G0023273) #18	Npdc1 (MGP_CAROLIEiJ_G0023272) #19	Entpd2 (MGP_CAROLIEiJ_G0023271) #20	MGP_CAROLIEiJ_G0023270 #21	Uap1l1 (MGP_CAROLIEiJ_G0023269) #22	Dpp7 (MGP_CAROLIEiJ_G0023268) #23	Man1b1 (MGP_CAROLIEiJ_G0023267) #24	Grin1 (MGP_CAROLIEiJ_G0023266) #25	Lrrc26 (MGP_CAROLIEiJ_G0023265) #26	Tmem210 (MGP_CAROLIEiJ_G0023264) #27	Anapc2 (MGP_CAROLIEiJ_G0023263) #28	Ssna1 (MGP_CAROLIEiJ_G0023262) #29	Tprn (MGP_CAROLIEiJ_G0023261) #30	Tmem203 (MGP_CAROLIEiJ_G0023260) #31	Ndor1 (MGP_CAROLIEiJ_G0023259) #33	Rnf208 (MGP_CAROLIEiJ_G0023258) #35	Cysrt1 (MGP_CAROLIEiJ_G0023257) #36	Rnf224 (MGP_CAROLIEiJ_G0023256) #37	Slc34a3 (MGP_CAROLIEiJ_G0023255)	Tubb4b (MGP_CAROLIEiJ_G0023254)
Shrew mouse	MODERN SPECIES	16	Ajm1 (MGP_PahariEiJ_G0024743)	Phpt1 (MGP_PahariEiJ_G0024742) #7	Mamdc4 (MGP_PahariEiJ_G0024741) #8	Traf2 (MGP_PahariEiJ_G0024739) #10	Fbxw5 (MGP_PahariEiJ_G0024738) #11	C8g (MGP_PahariEiJ_G0024737) #12	Lcn12 (MGP_PahariEiJ_G0024736) #13	Ptgds (MGP_PahariEiJ_G0024735) #14	Clic3 (MGP_PahariEiJ_G0024734) #15	Paxx (MGP_PahariEiJ_G0024733) #16	Abca2 (MGP_PahariEiJ_G0024732) #17	Fut7 (MGP_PahariEiJ_G0024731) #18	Npdc1 (MGP_PahariEiJ_G0024730) #19	Entpd2 (MGP_PahariEiJ_G0024729) #20	Sapcd2 (MGP_PahariEiJ_G0024728) #21	Uap1l1 (MGP_PahariEiJ_G0024727) #22	Dpp7 (MGP_PahariEiJ_G0024726) #23	Man1b1 (MGP_PahariEiJ_G0024725) #24	Grin1 (MGP_PahariEiJ_G0024724) #25	Lrrc26 (MGP_PahariEiJ_G0024723) #26	Tmem210 (MGP_PahariEiJ_G0024722) #27	Anapc2 (MGP_PahariEiJ_G0024721) #28	Ssna1 (MGP_PahariEiJ_G0024720) #29	Tprn (MGP_PahariEiJ_G0024719) #30	Tmem203 (MGP_PahariEiJ_G0024718) #31	Ndor1 (MGP_PahariEiJ_G0024717) #33	Rnf208 (MGP_PahariEiJ_G0024716) #35	Cysrt1 (MGP_PahariEiJ_G0024715) #36	Rnf224 (MGP_PahariEiJ_G0024714) #37	Slc34a3 (MGP_PahariEiJ_G0024713)	Tubb4b (MGP_PahariEiJ_G0024712)
Rat	MODERN SPECIES	13	Tmem141 (ENSRNOG00000028254)	Ccdc183 (ENSRNOG00000017044)	Rabl6 (ENSRNOG00000016795)	Ajm1 (ENSRNOG00000033863)	Edf1 (ENSRNOG00000016272) #9	Traf2 (ENSRNOG00000006238) #10	Fbxw5 (ENSRNOG00000028674) #11	C8g (ENSRNOG00000028701) #12	Ptgds (ENSRNOG00000015550) #14	Paxx (ENSRNOG00000015294) #16	Clic3 (ENSRNOG00000015184) #15	Abca2 (ENSRNOG00000014268) #17	Fut7 (ENSRNOG00000014156) #18	Npdc1 (ENSRNOG00000013102) #20	Sapcd2 (ENSRNOG00000013069) #21	Uap1l1 (ENSRNOG00000012960) #22	Dpp7 (ENSRNOG00000012640) #23	Man1b1 (ENSRNOG00000012559) #24	Grin1 (ENSRNOG00000011726) #25	Lrrc26 (ENSRNOG00000011457) #26	Tmem210 (ENSRNOG00000040275) #27	Anapc2 (ENSRNOG00000011295) #28	Ssna1 (ENSRNOG00000011093) #29	Tprn (ENSRNOG00000010896) #30	Tmem203 (ENSRNOG00000010894) #31	Ndor1 (ENSRNOG00000010616) #33	Cysrt1 (ENSRNOG00000010600) #36	Rnf224 (ENSRNOG00000040284) #37	Slc34a3 (ENSRNOG00000010451)	Rnf208 (ENSRNOG00000010607) #35	Tubb4b (ENSRNOG00000010170)
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00940000162046 #8	ENSGT00390000008519.lb #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00990000203858	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000002738.a #7	ENSGT00940000162046 #8	ENSGT00390000008519.lb #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Golden Hamster	MODERN SPECIES	771	Phpt1 (ENSMAUG00000016521) #7	Mamdc4 (ENSMAUG00000018382) #8	ENSMAUG00000013857 #9	Traf2 (ENSMAUG00000000898) #10	Fbxw5 (ENSMAUG00000016532) #11	C8g (ENSMAUG00000017627) #12	Lcn12 (ENSMAUG00000003344) #13	Ptgds (ENSMAUG00000003427) #14	Paxx (ENSMAUG00000003458) #16	Clic3 (ENSMAUG00000013703) #15	Abca2 (ENSMAUG00000000733) #17	Fut7 (ENSMAUG00000020724) #18	Npdc1 (ENSMAUG00000001234) #19	Entpd2 (ENSMAUG00000013094) #20	Sapcd2 (ENSMAUG00000019171) #21	Uap1l1 (ENSMAUG00000015530) #22	Dpp7 (ENSMAUG00000010547) #23	Man1b1 (ENSMAUG00000014662) #24	Grin1 (ENSMAUG00000019825) #25	Lrrc26 (ENSMAUG00000015545) #26	Tmem210 (ENSMAUG00000014833) #27	Anapc2 (ENSMAUG00000011413) #28	Ssna1 (ENSMAUG00000015044) #29	Tprn (ENSMAUG00000002634) #30	Tmem203 (ENSMAUG00000009023) #31	Cysrt1 (ENSMAUG00000018797) #36	Rnf224 (ENSMAUG00000008755) #37	Slc34a3 (ENSMAUG00000001635)	Tubb4b (ENSMAUG00000004730)	Fam166a (ENSMAUG00000010869)	Stpg3 (ENSMAUG00000019445)
Chinese hamster chok1gshd	MODERN SPECIES	188	Phpt1 (ENSCGRG00001009448) #7	Mamdc4 (ENSCGRG00001011748) #8	Edf1 (ENSCGRG00001010405) #9	Traf2 (ENSCGRG00001016324) #10	Fbxw5 (ENSCGRG00001006453) #11	C8g (ENSCGRG00001002546) #12	Lcn12 (ENSCGRG00001009091) #13	Ptgds (ENSCGRG00001005190) #14	Paxx (ENSCGRG00001004092) #16	Clic3 (ENSCGRG00001016510) #15	Abca2 (ENSCGRG00001008128) #17	Fut7 (ENSCGRG00001005263) #18	Npdc1 (ENSCGRG00001017154) #19	Entpd2 (ENSCGRG00001016211) #20	Sapcd2 (ENSCGRG00001017804) #21	Uap1l1 (ENSCGRG00001011921) #22	Dpp7 (ENSCGRG00001009351) #23	Man1b1 (ENSCGRG00001012772) #24	Grin1 (ENSCGRG00001010223) #25	Lrrc26 (ENSCGRG00001013084) #26	Tmem210 (ENSCGRG00001012766) #27	Anapc2 (ENSCGRG00001019671) #28	Ssna1 (ENSCGRG00001012373) #29	Tprn (ENSCGRG00001012035) #30	Tmem203 (ENSCGRG00001007727) #31	NDOR1 (ENSCGRG00001008788) #33	Rnf208 (ENSCGRG00001007346) #35	Cysrt1 (ENSCGRG00001006292) #36	Rnf224 (ENSCGRG00001008988) #37	Slc34a3 (ENSCGRG00001014537)	Tubb4b (ENSCGRG00001012850)
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00940000162046 #8	ENSGT00390000008519.lb #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00990000203858	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Northern American deer mouse	MODERN SPECIES	17	Edf1 (ENSPEMG00000018336) #9	Traf2 (ENSPEMG00000011629) #10	Fbxw5 (ENSPEMG00000011944) #11	ENSPEMG00000028250	C8g (ENSPEMG00000005092) #12	Lcn12 (ENSPEMG00000013508) #13	Ptgds (ENSPEMG00000008581) #14	Paxx (ENSPEMG00000018798) #16	Clic3 (ENSPEMG00000010344) #15	ENSPEMG00000026866 #17	ENSPEMG00000018604 #17	Fut7 (ENSPEMG00000014626) #18	Npdc1 (ENSPEMG00000018080) #19	Entpd2 (ENSPEMG00000016585) #20	Sapcd2 (ENSPEMG00000010207) #21	Uap1l1 (ENSPEMG00000002939) #22	Dpp7 (ENSPEMG00000014332) #23	Man1b1 (ENSPEMG00000008520) #24	Grin1 (ENSPEMG00000012505) #25	Lrrc26 (ENSPEMG00000028885) #26	Tmem210 (ENSPEMG00000009158) #27	Anapc2 (ENSPEMG00000011204) #28	Ssna1 (ENSPEMG00000025496) #29	Tprn (ENSPEMG00000018046) #30	Tmem203 (ENSPEMG00000006262) #31	Ndor1 (ENSPEMG00000009089) #33	Rnf208 (ENSPEMG00000031408) #35	Cysrt1 (ENSPEMG00000030113) #36	Rnf224 (ENSPEMG00000005243) #37	Slc34a3 (ENSPEMG00000016827)	Tubb4b (ENSPEMG00000030881)
Prairie vole	MODERN SPECIES	12	Mamdc4 (ENSMOCG00000013367) #8	Edf1 (ENSMOCG00000007658) #9	ENSMOCG00000013973	Traf2 (ENSMOCG00000019498) #10	Fbxw5 (ENSMOCG00000017562) #11	C8g (ENSMOCG00000021565) #12	Lcn12 (ENSMOCG00000003650) #13	Ptgds (ENSMOCG00000010316) #14	Paxx (ENSMOCG00000013243) #16	Clic3 (ENSMOCG00000015074) #15	Abca2 (ENSMOCG00000021438) #17	Fut7 (ENSMOCG00000017536) #18	Npdc1 (ENSMOCG00000008064) #19	Entpd2 (ENSMOCG00000010488) #20	Sapcd2 (ENSMOCG00000016720) #21	Uap1l1 (ENSMOCG00000020526) #22	Dpp7 (ENSMOCG00000022857) #23	Man1b1 (ENSMOCG00000022250) #24	Grin1 (ENSMOCG00000001739) #25	Lrrc26 (ENSMOCG00000000776) #26	Tmem210 (ENSMOCG00000022497) #27	Anapc2 (ENSMOCG00000018370) #28	Ssna1 (ENSMOCG00000000672) #29	Tprn (ENSMOCG00000002526) #30	Tmem203 (ENSMOCG00000002237) #31	Ndor1 (ENSMOCG00000014853) #33	Rnf208 (ENSMOCG00000017277) #35	Cysrt1 (ENSMOCG00000018383) #36	Rnf224 (ENSMOCG00000001015) #37	Slc34a3 (ENSMOCG00000020019)	Tubb4b (ENSMOCG00000001389)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1179	Phpt1 (ENSNGAG00000007744) #7	Mamdc4 (ENSNGAG00000018162) #8	Edf1 (ENSNGAG00000017082) #9	Traf2 (ENSNGAG00000020956) #10	Fbxw5 (ENSNGAG00000018210) #11	C8g (ENSNGAG00000002560) #12	Lcn12 (ENSNGAG00000018066) #13	Ptgds (ENSNGAG00000017471) #14	Paxx (ENSNGAG00000016660) #16	Clic3 (ENSNGAG00000012949) #15	Abca2 (ENSNGAG00000019981) #17	Fut7 (ENSNGAG00000020762) #18	Npdc1 (ENSNGAG00000008893) #19	Entpd2 (ENSNGAG00000002496) #20	Sapcd2 (ENSNGAG00000019600) #21	Uap1l1 (ENSNGAG00000020472) #22	Dpp7 (ENSNGAG00000020456) #23
Lesser Egyptian jerboa	MODERN SPECIES	53	Phpt1 (ENSJJAG00000021278) #7	Mamdc4 (ENSJJAG00000010818) #8	ENSJJAG00000022999 #9	Traf2 (ENSJJAG00000021847) #10	Fbxw5 (ENSJJAG00000021184) #11	C8g (ENSJJAG00000020577) #12	Lcn12 (ENSJJAG00000000327) #13	Ptgds (ENSJJAG00000017263) #14	Paxx (ENSJJAG00000006997) #16	Clic3 (ENSJJAG00000022037) #15	Abca2 (ENSJJAG00000016080) #17	Fut7 (ENSJJAG00000019986) #18	Npdc1 (ENSJJAG00000008582) #19	Entpd2 (ENSJJAG00000019539) #20	Sapcd2 (ENSJJAG00000021677) #21	Uap1l1 (ENSJJAG00000011506) #22	Dpp7 (ENSJJAG00000023901) #23	Man1b1 (ENSJJAG00000009593) #24	Grin1 (ENSJJAG00000021930) #25	Lrrc26 (ENSJJAG00000022399) #26	Tmem210 (ENSJJAG00000022174) #27	Anapc2 (ENSJJAG00000020552) #28	Ssna1 (ENSJJAG00000015805) #29	Tprn (ENSJJAG00000018406) #30	Ndor1 (ENSJJAG00000023469) #33	Rnf208 (ENSJJAG00000003202) #35	Cysrt1 (ENSJJAG00000000597) #36	Rnf224 (ENSJJAG00000012529) #37	Slc34a3 (ENSJJAG00000009730)	Tubb4b (ENSJJAG00000021854)	Fam166a (ENSJJAG00000015910)
Kangaroo rat	MODERN SPECIES	437	Rabl6 (ENSDORG00000012727)	Phpt1 (ENSDORG00000005100) #7	Mamdc4 (ENSDORG00000005098) #8	ENSDORG00000005097 #9	Traf2 (ENSDORG00000004160) #10	Fbxw5 (ENSDORG00000004161) #11	C8g (ENSDORG00000026220) #12	ENSDORG00000028372	Paxx (ENSDORG00000010003) #16	Clic3 (ENSDORG00000010004) #15	Abca2 (ENSDORG00000010005) #17	Fut7 (ENSDORG00000027166) #18	Npdc1 (ENSDORG00000025278) #19	Entpd2 (ENSDORG00000003428) #20	ENSDORG00000004965 #21	Uap1l1 (ENSDORG00000001214) #22	Dpp7 (ENSDORG00000001210) #23	Man1b1 (ENSDORG00000024703) #24	Grin1 (ENSDORG00000025069) #25	Tmem210 (ENSDORG00000009420) #27	Anapc2 (ENSDORG00000009421) #28	Ssna1 (ENSDORG00000024926) #29	Tmem203 (ENSDORG00000009424) #31	Ndor1 (ENSDORG00000009425) #33	ENSDORG00000024457	Cysrt1 (ENSDORG00000029637) #36	Rnf224 (ENSDORG00000024963) #37	Slc34a3 (ENSDORG00000009429)	Tubb4b (ENSDORG00000029897)	Fam166a (ENSDORG00000009433)	Stpg3 (ENSDORG00000009435)
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT01050000244868.a.a.b.a.a ##13	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00730000114714	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT01050000244868.a.a.b.a.a ##13	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00390000002738.a #7	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Guinea pig	MODERN SPECIES	18	ENSCPOG00000033948	PHPT1 (ENSCPOG00000032818) #7	EDF1 (ENSCPOG00000020393) #9	TRAF2 (ENSCPOG00000004243) #10	FBXW5 (ENSCPOG00000002830) #11	C8G (ENSCPOG00000002834) #12	ENSCPOG00000022323 #13	PTGDS (ENSCPOG00000033226) #14	PAXX (ENSCPOG00000019861) #16	CLIC3 (ENSCPOG00000036472) #15	ABCA2 (ENSCPOG00000014498) #17	FUT7 (ENSCPOG00000032043) #18	NPDC1 (ENSCPOG00000014094) #19	ENTPD2 (ENSCPOG00000023108) #20	SAPCD2 (ENSCPOG00000009347) #21	UAP1L1 (ENSCPOG00000009344) #22	DPP7 (ENSCPOG00000019270) #23	MAN1B1 (ENSCPOG00000023581) #24	GRIN1 (ENSCPOG00000012581) #25	LRRC26 (ENSCPOG00000031975) #26	TMEM210 (ENSCPOG00000019860) #27	ANAPC2 (ENSCPOG00000009756) #28	SSNA1 (ENSCPOG00000034909) #29	TPRN (ENSCPOG00000034478) #30	TMEM203 (ENSCPOG00000023800) #31	NDOR1 (ENSCPOG00000009779) #33	RNF208 (ENSCPOG00000036003) #35	CYSRT1 (ENSCPOG00000026441) #36	SLC34A3 (ENSCPOG00000009791)	TUBB4B (ENSCPOG00000031843)	FAM166A (ENSCPOG00000009796)
Hystricomorpha_b	ANCESTRAL SPECIES	36	ENSGT00390000016543	ENSGT00390000002738.a #7	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Degu	MODERN SPECIES	164	AJM1 (ENSODEG00000015654)	PHPT1 (ENSODEG00000015162) #7	MAMDC4 (ENSODEG00000014929) #8	ENSODEG00000015447 #9	TRAF2 (ENSODEG00000015533) #10	ENSODEG00000014724 #11	LCN12 (ENSODEG00000014923) #13	PTGDS (ENSODEG00000015463) #14	PAXX (ENSODEG00000015128) #16	CLIC3 (ENSODEG00000014543) #15	ABCA2 (ENSODEG00000015251) #17	FUT7 (ENSODEG00000020269) #18	NPDC1 (ENSODEG00000014632) #19	ENTPD2 (ENSODEG00000014369) #20	SAPCD2 (ENSODEG00000015491) #21	UAP1L1 (ENSODEG00000014947) #22	DPP7 (ENSODEG00000014505) #23	MAN1B1 (ENSODEG00000014488) #24	GRIN1 (ENSODEG00000016112) #25	LRRC26 (ENSODEG00000013944) #26	TMEM210 (ENSODEG00000014471) #27	ANAPC2 (ENSODEG00000015025) #28	SSNA1 (ENSODEG00000015066) #29	TPRN (ENSODEG00000014622) #30	NDOR1 (ENSODEG00000015210) #33	ENSODEG00000020361	SLC34A3 (ENSODEG00000014187)	TUBB4B (ENSODEG00000015427)	FAM166A (ENSODEG00000014315)	STPG3 (ENSODEG00000014179)	NELFB (ENSODEG00000015049)
Long-tailed chinchilla	MODERN SPECIES	220	RABL6 (ENSCLAG00000005796)	AJM1 (ENSCLAG00000006750)	PHPT1 (ENSCLAG00000006935) #7	MAMDC4 (ENSCLAG00000007572) #8	ENSCLAG00000009894 #9	TRAF2 (ENSCLAG00000010303) #10	FBXW5 (ENSCLAG00000006688) #11	LCN12 (ENSCLAG00000006537) #13	PTGDS (ENSCLAG00000006819) #14	PAXX (ENSCLAG00000007451) #16	CLIC3 (ENSCLAG00000007954) #15	ABCA2 (ENSCLAG00000008162) #17	FUT7 (ENSCLAG00000013275) #18	NPDC1 (ENSCLAG00000004406) #19	ENTPD2 (ENSCLAG00000006261) #20	UAP1L1 (ENSCLAG00000008188) #22	DPP7 (ENSCLAG00000008918) #23	MAN1B1 (ENSCLAG00000013391) #24	GRIN1 (ENSCLAG00000008386) #25	LRRC26 (ENSCLAG00000004796) #26	TMEM210 (ENSCLAG00000004973) #27	ANAPC2 (ENSCLAG00000005987) #28	SSNA1 (ENSCLAG00000004612) #29	TPRN (ENSCLAG00000007574) #30	TMEM203 (ENSCLAG00000017753) #31	NDOR1 (ENSCLAG00000006332) #33	RNF208 (ENSCLAG00000017701) #35	CYSRT1 (ENSCLAG00000007413) #36	RNF224 (ENSCLAG00000007639) #37	SLC34A3 (ENSCLAG00000005009)	TUBB4B (ENSCLAG00000007043)
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000040961 #7	MAMDC4 (ENSHGLG00000014599) #8	EDF1 (ENSHGLG00000014528) #9	TRAF2 (ENSHGLG00000014367) #10	FBXW5 (ENSHGLG00000018459) #11	C8G (ENSHGLG00000012991) #12	ENSHGLG00000012411 #14	ENSHGLG00000048876 ##13	ENSHGLG00000048674 #16	CLIC3 (ENSHGLG00000019357) #15	ABCA2 (ENSHGLG00000010424) #17	FUT7 (ENSHGLG00000019096) #18	NPDC1 (ENSHGLG00000016494) #19	ENTPD2 (ENSHGLG00000013712) #20	SAPCD2 (ENSHGLG00000013081) #21	UAP1L1 (ENSHGLG00000014350) #22	DPP7 (ENSHGLG00000012051) #23	GRIN1 (ENSHGLG00000009960) #25	ANAPC2 (ENSHGLG00000012889) #28	SSNA1 (ENSHGLG00000012331) #29	TPRN (ENSHGLG00000011593) #30	ENSHGLG00000020656 #31
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT01050000244868.a.a.b.a.a ##13	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00730000114714	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT01050000244868.a.a.b.a.a ##13	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00730000114714	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00940000162046 #8	ENSGT00390000008519 #9	ENSGT00940000156621 #10	ENSGT00730000111276 #11	ENSGT00440000034309 #12	ENSGT01050000244868.b.b #13	ENSGT01100000263580 #14	ENSGT01050000244868.a.a.b.a.a ##13	ENSGT00390000000543 #16	ENSGT00940000161243 #15	ENSGT00940000158560 #17	ENSGT00940000161618 #18	ENSGT00440000038604 #19	ENSGT01100000263542.B.b #20	ENSGT00390000008072 #21	ENSGT00940000153464.A.a #22	ENSGT00940000159838 #23	ENSGT00940000155422 #24	ENSGT00940000158016.d #25	ENSGT00940000162780 #26	ENSGT00390000008939 #27	ENSGT00390000016127 #28	ENSGT00390000012318 #29	ENSGT00530000064035.b #30	ENSGT00510000049510 #31	ENSGT00930000151050 #33	ENSGT00680000100126 #35	ENSGT00390000003233 #36	ENSGT00510000050587 #37	ENSGT00950000183177.a.a.a.b	ENSGT00940000154394.b.a.b
Arctic ground squirrel	MODERN SPECIES	156	PHPT1 (ENSUPAG00010006497) #7	MAMDC4 (ENSUPAG00010006442) #8	EDF1 (ENSUPAG00010006437) #9	TRAF2 (ENSUPAG00010006407) #10	FBXW5 (ENSUPAG00010006399) #11	C8G (ENSUPAG00010006391) #12	LCN12 (ENSUPAG00010006378) #13	PTGDS (ENSUPAG00010006372) #14	ENSUPAG00010006364 #16	CLIC3 (ENSUPAG00010006357) #15	ENSUPAG00010006296 #17	FUT7 (ENSUPAG00010006288) #18	NPDC1 (ENSUPAG00010006257) #19	ENTPD2 (ENSUPAG00010006251) #20	SAPCD2 (ENSUPAG00010006246) #21	UAP1L1 (ENSUPAG00010006239) #22	DPP7 (ENSUPAG00010006226) #23	MAN1B1 (ENSUPAG00010006185) #24	ENSUPAG00010006176 #25	ENSUPAG00010006171 #25	LRRC26 (ENSUPAG00010006170) #26	TMEM210 (ENSUPAG00010006162) #27	ANAPC2 (ENSUPAG00010006139) #28	SSNA1 (ENSUPAG00010006131) #29	TPRN (ENSUPAG00010006122) #30	TMEM203 (ENSUPAG00010006119) #31	NDOR1 (ENSUPAG00010006072) #33	RNF208 (ENSUPAG00010006067) #35	CYSRT1 (ENSUPAG00010006061) #36	RNF224 (ENSUPAG00010006059) #37	SLC34A3 (ENSUPAG00010006039)
Squirrel	MODERN SPECIES	269	MAMDC4 (ENSSTOG00000015455) #8	EDF1 (ENSSTOG00000025154) #9	TRAF2 (ENSSTOG00000012096) #10	FBXW5 (ENSSTOG00000021979) #11	C8G (ENSSTOG00000014108) #12	LCN12 (ENSSTOG00000024098) #13	PTGDS (ENSSTOG00000019805) #14	ENSSTOG00000019684 ##13	PAXX (ENSSTOG00000025601) #16	CLIC3 (ENSSTOG00000023657) #15	ABCA2 (ENSSTOG00000013825) #17	FUT7 (ENSSTOG00000013862) #18	NPDC1 (ENSSTOG00000019775) #19	ENTPD2 (ENSSTOG00000010778) #20	SAPCD2 (ENSSTOG00000010785) #21	UAP1L1 (ENSSTOG00000010790) #22	DPP7 (ENSSTOG00000008730) #23	MAN1B1 (ENSSTOG00000021513) #24	GRIN1 (ENSSTOG00000026607) #25	LRRC26 (ENSSTOG00000027229) #26	TMEM210 (ENSSTOG00000003550) #27	ANAPC2 (ENSSTOG00000004113) #28	SSNA1 (ENSSTOG00000004137) #29	TPRN (ENSSTOG00000027939) #30	TMEM203 (ENSSTOG00000020912) #31	NDOR1 (ENSSTOG00000004178) #33	CYSRT1 (ENSSTOG00000033064) #36	SLC34A3 (ENSSTOG00000014451)	TUBB4B (ENSSTOG00000021231)	FAM166A (ENSSTOG00000014459)	STPG3 (ENSSTOG00000014467)
Alpin marmot	MODERN SPECIES	106	RABL6 (ENSMMMG00000009622)	PHPT1 (ENSMMMG00000009614) #7	EDF1 (ENSMMMG00000009463) #9	TRAF2 (ENSMMMG00000009429) #10	FBXW5 (ENSMMMG00000009406) #11	C8G (ENSMMMG00000009391) #12	LCN12 (ENSMMMG00000009372) #13	PTGDS (ENSMMMG00000009339) #14	PAXX (ENSMMMG00000009327) #16	CLIC3 (ENSMMMG00000009308) #15	ENSMMMG00000009264 #17	FUT7 (ENSMMMG00000009252) #18	NPDC1 (ENSMMMG00000008941) #19	ENTPD2 (ENSMMMG00000008921) #20	SAPCD2 (ENSMMMG00000008899) #21	UAP1L1 (ENSMMMG00000008871) #22	DPP7 (ENSMMMG00000008858) #23	MAN1B1 (ENSMMMG00000008828) #24	ENSMMMG00000008815 #25	ENSMMMG00000008804 #25	LRRC26 (ENSMMMG00000008800) #26	TMEM210 (ENSMMMG00000008792) #27	ANAPC2 (ENSMMMG00000008771) #28	SSNA1 (ENSMMMG00000008759) #29	ENSMMMG00000008756 #30	TMEM203 (ENSMMMG00000008754) #31	NDOR1 (ENSMMMG00000008644) #33	ENSMMMG00000008639	RNF208 (ENSMMMG00000008635) #35	CYSRT1 (ENSMMMG00000008629) #36	RNF224 (ENSMMMG00000008626) #37
Eurasian red squirrel	MODERN SPECIES	6	AJM1 (ENSSVLG00005016763)	PHPT1 (ENSSVLG00005016779) #7	ENSSVLG00005017849 #9	TRAF2 (ENSSVLG00005017919) #10	FBXW5 (ENSSVLG00005017960) #11	C8G (ENSSVLG00005017987) #12	LCN12 (ENSSVLG00005018084) #13	PTGDS (ENSSVLG00005018156) #14	PAXX (ENSSVLG00005018285) #16	CLIC3 (ENSSVLG00005018309) #15	ENSSVLG00005018392 #17	FUT7 (ENSSVLG00005018791) #18	NPDC1 (ENSSVLG00005018818) #19	ENTPD2 (ENSSVLG00005018860) #20	SAPCD2 (ENSSVLG00005018916) #21	UAP1L1 (ENSSVLG00005019001) #22	DPP7 (ENSSVLG00005019137) #23	MAN1B1 (ENSSVLG00005019401) #24	ENSSVLG00005019495 #25	ENSSVLG00005019547 #25	LRRC26 (ENSSVLG00005019594) #26	TMEM210 (ENSSVLG00005019652) #27	ANAPC2 (ENSSVLG00005019762) #28	SSNA1 (ENSSVLG00005019908) #29	TPRN (ENSSVLG00005019950) #30	TMEM203 (ENSSVLG00005019990) #31	NDOR1 (ENSSVLG00005020031) #33	ENSSVLG00005020114	RNF208 (ENSSVLG00005020130) #35	CYSRT1 (ENSSVLG00005020147) #36	RNF224 (ENSSVLG00005020170) #37