Fungi/Metazoa group DUPLICATION Fungi/Metazoa group ANCESTRAL SPECIES ENSGT00940000153464.A #22 Bilateria ANCESTRAL SPECIES ENSGT00940000153464.A #22 Chordata ANCESTRAL SPECIES ENSGT00940000153464.A #22 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00940000153464.A.a #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000153464.A.a #22 Euteleostomi ANCESTRAL SPECIES ENSGT00940000153464.A.a #22 Sarcopterygii ANCESTRAL SPECIES 74 ENSGT00390000016127 #28 ENSGT00940000164889 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00510000050587 #35 ENSGT00950000182888.b ENSGT00940000154842.a.a ENSGT00390000020276.qb.a ENSGT00940000154394.b.a.b #37 ENSGT00730000111343 ENSGT00620000089226 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000164907 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00390000012665 ENSGT01080000257442 ENSGT00940000164772 ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000166112 ENSGT00940000161928 ENSGT00950000186109 ENSGT00390000006843 ENSGT00530000063843.a Tetrapoda ANCESTRAL SPECIES 65 ENSGT00940000160908 ENSGT00940000153116.D ENSGT00390000016002 ENSGT00390000016543 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000170043.B ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000164721 ENSGT00940000163282 ENSGT00940000159838 #24 ENSGT00390000012665 ENSGT01080000257442 ENSGT00940000164772 ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000166112 ENSGT00940000161928 ENSGT00950000186109 ENSGT00390000006843 Amniota ANCESTRAL SPECIES 36 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282 ENSGT00940000157531 ENSGT00390000012665 ENSGT01080000257442 ENSGT00940000164772 ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000166112 ENSGT00940000160109 ENSGT00940000161928 Mammalia ANCESTRAL SPECIES 98 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 Theria ANCESTRAL SPECIES 23 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 Eutheria ANCESTRAL SPECIES 7 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Primates ANCESTRAL SPECIES 9 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Haplorrhini ANCESTRAL SPECIES 47 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Simiiformes ANCESTRAL SPECIES 11 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Platyrrhini ANCESTRAL SPECIES 8 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Mas night monkey MODERN SPECIES 540 EDF1 (ENSANAG00000004851) #7 TRAF2 (ENSANAG00000034527) #8 FBXW5 (ENSANAG00000038194) #9 ENSANAG00000024923 #10 C8G (ENSANAG00000023297) #11 ENSANAG00000034930 #12 PTGDS (ENSANAG00000035287) #13 ENSANAG00000021710 #14 PAXX (ENSANAG00000021834) #15 CLIC3 (ENSANAG00000021998) #16 ABCA2 (ENSANAG00000028378) #17 FUT7 (ENSANAG00000030157) #18 NPDC1 (ENSANAG00000032327) #19 ENTPD2 (ENSANAG00000038128) #20 SAPCD2 (ENSANAG00000021517) #21 UAP1L1 (ENSANAG00000023579) #22 MAN1B1 (ENSANAG00000020480) #23 DPP7 (ENSANAG00000033637) #24 GRIN1 (ENSANAG00000029032) #25 LRRC26 (ENSANAG00000028967) #26 TMEM210 (ENSANAG00000029890) #27 ANAPC2 (ENSANAG00000032034) #28 SSNA1 (ENSANAG00000029404) #29 TPRN (ENSANAG00000037684) #30 TMEM203 (ENSANAG00000019915) #31 NDOR1 (ENSANAG00000027780) #32 ENSANAG00000019678 #33 CYSRT1 (ENSANAG00000033756) #34 RNF224 (ENSANAG00000033789) #35 SLC34A3 (ENSANAG00000026188) #36 ENSANAG00000037571 #37 Cebidae ANCESTRAL SPECIES 7 ENSGT00940000162046 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Cebidae_a ANCESTRAL SPECIES 50 ENSGT00940000162046 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Capuchin MODERN SPECIES 339 MAMDC4 (ENSCCAG00000022947) EDF1 (ENSCCAG00000020655) #7 TRAF2 (ENSCCAG00000027650) #8 ENSCCAG00000022896 #10 FBXW5 (ENSCCAG00000021144) #9 C8G (ENSCCAG00000029043) #11 LCN12 (ENSCCAG00000037477) PTGDS (ENSCCAG00000027009) #13 PAXX (ENSCCAG00000030296) #15 CLIC3 (ENSCCAG00000029545) #16 ABCA2 (ENSCCAG00000034401) #17 FUT7 (ENSCCAG00000030820) #18 NPDC1 (ENSCCAG00000026896) #19 ENTPD2 (ENSCCAG00000027749) #20 SAPCD2 (ENSCCAG00000024653) #21 UAP1L1 (ENSCCAG00000022093) #22 MAN1B1 (ENSCCAG00000036958) #23 DPP7 (ENSCCAG00000030515) #24 GRIN1 (ENSCCAG00000021626) #25 LRRC26 (ENSCCAG00000031945) #26 TMEM210 (ENSCCAG00000029675) #27 ANAPC2 (ENSCCAG00000035434) #28 SSNA1 (ENSCCAG00000023438) #29 TPRN (ENSCCAG00000023747) #30 TMEM203 (ENSCCAG00000018771) #31 NDOR1 (ENSCCAG00000023502) #32 RNF208 (ENSCCAG00000012897) #33 CYSRT1 (ENSCCAG00000019773) #34 RNF224 (ENSCCAG00000035489) #35 SLC34A3 (ENSCCAG00000036657) #36 FAM166A (ENSCCAG00000036261) Bolivian squirrel monkey MODERN SPECIES 186 MAMDC4 (ENSSBOG00000035516) EDF1 (ENSSBOG00000021626) #7 TRAF2 (ENSSBOG00000028404) #8 FBXW5 (ENSSBOG00000033854) #9 ENSSBOG00000027471 #10 C8G (ENSSBOG00000026427) #11 LCN12 (ENSSBOG00000034929) PTGDS (ENSSBOG00000026927) #13 PAXX (ENSSBOG00000027322) #15 CLIC3 (ENSSBOG00000024337) #16 ABCA2 (ENSSBOG00000024701) #17 FUT7 (ENSSBOG00000034082) #18 NPDC1 (ENSSBOG00000027848) #19 ENTPD2 (ENSSBOG00000021811) #20 ENSSBOG00000030449 #21 UAP1L1 (ENSSBOG00000018978) #22 MAN1B1 (ENSSBOG00000019561) #23 DPP7 (ENSSBOG00000024015) #24 GRIN1 (ENSSBOG00000035050) #25 TMEM210 (ENSSBOG00000026440) #27 ANAPC2 (ENSSBOG00000029954) #28 SSNA1 (ENSSBOG00000028556) #29 TPRN (ENSSBOG00000028335) #30 TMEM203 (ENSSBOG00000010685) #31 NDOR1 (ENSSBOG00000025055) #32 RNF208 (ENSSBOG00000019713) #33 CYSRT1 (ENSSBOG00000029686) #34 RNF224 (ENSSBOG00000023099) #35 SLC34A3 (ENSSBOG00000023135) #36 TUBB4B (ENSSBOG00000024919) #37 FAM166A (ENSSBOG00000029134) Marmoset MODERN SPECIES TRAF2 (ENSCJAG00000011179) #8 PHPT1 (ENSCJAG00000011097) MAMDC4 (ENSCJAG00000011117) ENSCJAG00000011166 ##7 FBXW5 (ENSCJAG00000048064) #9 C8G (ENSCJAG00000011199) #11 LCN12 (ENSCJAG00000011213) ENSCJAG00000011224 #13 PAXX (ENSCJAG00000052807) #15 CLIC3 (ENSCJAG00000012814) #16 FUT7 (ENSCJAG00000012851) #18 NPDC1 (ENSCJAG00000012859) #19 TUBB4B (ENSCJAG00000041742) #37 ENTPD2 (ENSCJAG00000037121) #20 SAPCD2 (ENSCJAG00000012905) #21 UAP1L1 (ENSCJAG00000012920) #22 MAN1B1 (ENSCJAG00000012934) #23 DPP7 (ENSCJAG00000012949) #24 GRIN1 (ENSCJAG00000012981) #25 LRRC26 (ENSCJAG00000013014) #26 TMEM210 (ENSCJAG00000013022) #27 ANAPC2 (ENSCJAG00000013025) #28 SSNA1 (ENSCJAG00000080463) #29 TPRN (ENSCJAG00000070096) #30 TMEM203 (ENSCJAG00000002165) #31 NDOR1 (ENSCJAG00000013075) #32 RNF208 (ENSCJAG00000013109) #33 CYSRT1 (ENSCJAG00000013115) #34 RNF224 (ENSCJAG00000023024) #35 FAM166A (ENSCJAG00000013129) STPG3 (ENSCJAG00000013136) Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00910000147630 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00860000136271 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Hominoidea ANCESTRAL SPECIES 19 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00910000147630 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00860000136271 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Hominidae ANCESTRAL SPECIES 10 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00860000136271 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00860000136271 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Homo/Pan group ANCESTRAL SPECIES 16 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00860000136271 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Pan ANCESTRAL SPECIES 18 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00860000136271 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Chimpanzee MODERN SPECIES 22 EDF1 (ENSPTRG00000021577) #7 TRAF2 (ENSPTRG00000021578) #8 FBXW5 (ENSPTRG00000021579) #9 ENSPTRG00000043752 #10 C8G (ENSPTRG00000021580) #11 LCN12 (ENSPTRG00000021581) PTGDS (ENSPTRG00000021582) #13 ENSPTRG00000051506 PAXX (ENSPTRG00000028979) #15 CLIC3 (ENSPTRG00000021584) #16 ABCA2 (ENSPTRG00000044781) #17 FUT7 (ENSPTRG00000043250) #18 NPDC1 (ENSPTRG00000021587) #19 ENTPD2 (ENSPTRG00000021588) #20 SAPCD2 (ENSPTRG00000047923) #21 UAP1L1 (ENSPTRG00000021590) #22 MAN1B1 (ENSPTRG00000021591) #23 DPP7 (ENSPTRG00000021592) #24 GRIN1 (ENSPTRG00000021594) #25 LRRC26 (ENSPTRG00000021595) #26 TMEM210 (ENSPTRG00000052326) #27 ANAPC2 (ENSPTRG00000021597) #28 SSNA1 (ENSPTRG00000021599) #29 TPRN (ENSPTRG00000021600) #30 ENSPTRG00000043788 TMEM203 (ENSPTRG00000052099) #31 NDOR1 (ENSPTRG00000024013) #32 RNF208 (ENSPTRG00000044389) #33 CYSRT1 (ENSPTRG00000024338) #34 RNF224 (ENSPTRG00000039335) #35 SLC34A3 (ENSPTRG00000023766) #36 Bonobo MODERN SPECIES 22 EDF1 (ENSPPAG00000028843) #7 TRAF2 (ENSPPAG00000002032) #8 FBXW5 (ENSPPAG00000030876) #9 ENSPPAG00000040511 #10 C8G (ENSPPAG00000005584) #11 LCN12 (ENSPPAG00000040460) PTGDS (ENSPPAG00000041634) #13 LCNL1 (ENSPPAG00000030939) PAXX (ENSPPAG00000033365) #15 CLIC3 (ENSPPAG00000041120) #16 ABCA2 (ENSPPAG00000042459) #17 FUT7 (ENSPPAG00000036563) #18 ENSPPAG00000040449 #19 ENTPD2 (ENSPPAG00000042388) #20 ENSPPAG00000032210 #21 UAP1L1 (ENSPPAG00000039168) #22 MAN1B1 (ENSPPAG00000039110) #23 ENSPPAG00000041221 #24 GRIN1 (ENSPPAG00000030948) #25 LRRC26 (ENSPPAG00000026790) #26 TMEM210 (ENSPPAG00000034325) #27 ANAPC2 (ENSPPAG00000043226) #28 SSNA1 (ENSPPAG00000025725) #29 ENSPPAG00000037138 #30 ENSPPAG00000010872 TMEM203 (ENSPPAG00000014126) #31 NDOR1 (ENSPPAG00000038650) #32 RNF208 (ENSPPAG00000002712) #33 ENSPPAG00000040826 #34 RNF224 (ENSPPAG00000016694) #35 SLC34A3 (ENSPPAG00000027312) #36 Human MODERN SPECIES 21 EDF1 (ENSG00000107223) #7 TRAF2 (ENSG00000127191) #8 FBXW5 (ENSG00000159069) #9 C8G (ENSG00000176919) #11 LCN12 (ENSG00000184925) PTGDS (ENSG00000107317) #13 LCNL1 (ENSG00000214402) PAXX (ENSG00000148362) #15 CLIC3 (ENSG00000169583) #16 ABCA2 (ENSG00000107331) #17 FUT7 (ENSG00000180549) #18 ENSG00000279073 NPDC1 (ENSG00000107281) #19 ENTPD2 (ENSG00000054179) #20 SAPCD2 (ENSG00000186193) #21 UAP1L1 (ENSG00000197355) #22 MAN1B1 (ENSG00000177239) #23 DPP7 (ENSG00000176978) #24 GRIN1 (ENSG00000176884) #25 LRRC26 (ENSG00000184709) #26 ENSG00000261793 TMEM210 (ENSG00000185863) #27 ANAPC2 (ENSG00000176248) #28 SSNA1 (ENSG00000176101) #29 TPRN (ENSG00000176058) #30 TMEM203 (ENSG00000187713) #31 NDOR1 (ENSG00000188566) #32 ENSG00000284976 RNF208 (ENSG00000212864) #33 CYSRT1 (ENSG00000197191) #34 RNF224 (ENSG00000233198) #35 Gorilla MODERN SPECIES 22 EDF1 (ENSGGOG00000014750) #7 TRAF2 (ENSGGOG00000007150) #8 FBXW5 (ENSGGOG00000004350) #9 ENSGGOG00000043105 #10 C8G (ENSGGOG00000004352) #11 ENSGGOG00000025961 PTGDS (ENSGGOG00000004362) #13 LCNL1 (ENSGGOG00000040429) PAXX (ENSGGOG00000011640) #15 CLIC3 (ENSGGOG00000011649) #16 ABCA2 (ENSGGOG00000011658) #17 FUT7 (ENSGGOG00000011697) #18 ENSGGOG00000011705 #19 ENTPD2 (ENSGGOG00000011714) #20 ENSGGOG00000025996 #21 UAP1L1 (ENSGGOG00000007133) #22 MAN1B1 (ENSGGOG00000001613) #23 ENSGGOG00000008823 #24 GRIN1 (ENSGGOG00000001780) #25 LRRC26 (ENSGGOG00000004926) #26 TMEM210 (ENSGGOG00000001782) #27 ANAPC2 (ENSGGOG00000011686) #28 SSNA1 (ENSGGOG00000011694) #29 TPRN (ENSGGOG00000011700) #30 ENSGGOG00000038743 TMEM203 (ENSGGOG00000007410) #31 NDOR1 (ENSGGOG00000026994) #32 RNF208 (ENSGGOG00000023691) #33 ENSGGOG00000007405 #34 RNF224 (ENSGGOG00000023355) #35 SLC34A3 (ENSGGOG00000001886) #36 Orangutan MODERN SPECIES 22 AJM1 (ENSPPYG00000032469) PHPT1 (ENSPPYG00000019787) ENSPPYG00000019789 #7 TRAF2 (ENSPPYG00000019790) #8 C8G (ENSPPYG00000019792) #11 LCN12 (ENSPPYG00000019793) PTGDS (ENSPPYG00000019795) #13 LCNL1 (ENSPPYG00000019796) PAXX (ENSPPYG00000019797) #15 CLIC3 (ENSPPYG00000019798) #16 ENSPPYG00000031211 #17 FUT7 (ENSPPYG00000019800) #18 NPDC1 (ENSPPYG00000019802) #19 ENTPD2 (ENSPPYG00000019803) #20 SAPCD2 (ENSPPYG00000019804) #21 UAP1L1 (ENSPPYG00000019805) #22 MAN1B1 (ENSPPYG00000019806) #23 DPP7 (ENSPPYG00000019807) #24 GRIN1 (ENSPPYG00000019809) #25 LRRC26 (ENSPPYG00000019810) #26 TMEM210 (ENSPPYG00000019811) #27 ANAPC2 (ENSPPYG00000019812) #28 ENSPPYG00000035048 #29 TPRN (ENSPPYG00000019814) #30 ENSPPYG00000019815 TMEM203 (ENSPPYG00000019816) #31 NDOR1 (ENSPPYG00000019817) #32 ENSPPYG00000032379 RNF208 (ENSPPYG00000019818) #33 ENSPPYG00000019820 #34 RNF224 (ENSPPYG00000033655) #35 Gibbon MODERN SPECIES 23 EDF1 (ENSNLEG00000008605) #7 TRAF2 (ENSNLEG00000008615) #8 FBXW5 (ENSNLEG00000008632) #9 C8G (ENSNLEG00000008662) #11 LCN12 (ENSNLEG00000008680) PTGDS (ENSNLEG00000008707) #13 ENSNLEG00000031130 ENSNLEG00000008746 #15 CLIC3 (ENSNLEG00000008759) #16 ENSNLEG00000028412 ABCA2 (ENSNLEG00000008770) #17 FUT7 (ENSNLEG00000008851) #18 NPDC1 (ENSNLEG00000008855) #19 ENTPD2 (ENSNLEG00000008893) #20 SAPCD2 (ENSNLEG00000008908) #21 UAP1L1 (ENSNLEG00000008911) #22 MAN1B1 (ENSNLEG00000008929) #23 DPP7 (ENSNLEG00000008967) #24 GRIN1 (ENSNLEG00000009062) #25 LRRC26 (ENSNLEG00000009100) #26 TMEM210 (ENSNLEG00000009102) #27 ANAPC2 (ENSNLEG00000009105) #28 SSNA1 (ENSNLEG00000009118) #29 ENSNLEG00000009121 #30 TMEM203 (ENSNLEG00000032750) #31 NDOR1 (ENSNLEG00000009137) #32 CYSRT1 (ENSNLEG00000018696) #34 RNF224 (ENSNLEG00000030401) #35 SLC34A3 (ENSNLEG00000009144) #36 TUBB4B (ENSNLEG00000028312) #37 FAM166A (ENSNLEG00000009167) Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00910000147630 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00860000136271 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00910000147630 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Vervet Monkey MODERN SPECIES 3 PHPT1 (ENSCSAG00000016037) MAMDC4 (ENSCSAG00000016066) EDF1 (ENSCSAG00000016077) #7 TRAF2 (ENSCSAG00000016084) #8 FBXW5 (ENSCSAG00000016087) #9 C8G (ENSCSAG00000016093) #11 LCN12 (ENSCSAG00000016096) PTGDS (ENSCSAG00000016116) #13 PAXX (ENSCSAG00000016133) #15 CLIC3 (ENSCSAG00000016143) #16 ABCA2 (ENSCSAG00000016316) #17 FUT7 (ENSCSAG00000019683) #18 NPDC1 (ENSCSAG00000016430) #19 ENTPD2 (ENSCSAG00000016437) #20 SAPCD2 (ENSCSAG00000016450) #21 UAP1L1 (ENSCSAG00000016457) #22 MAN1B1 (ENSCSAG00000016484) #23 DPP7 (ENSCSAG00000016487) #24 GRIN1 (ENSCSAG00000016511) #25 LRRC26 (ENSCSAG00000016505) #26 TMEM210 (ENSCSAG00000016514) #27 ANAPC2 (ENSCSAG00000016520) #28 SSNA1 (ENSCSAG00000016524) #29 TPRN (ENSCSAG00000016532) #30 TMEM203 (ENSCSAG00000019682) #31 NDOR1 (ENSCSAG00000016571) #32 RNF208 (ENSCSAG00000019681) #33 CYSRT1 (ENSCSAG00000019680) #34 SLC34A3 (ENSCSAG00000016602) #36 TUBB4B (ENSCSAG00000016610) #37 FAM166A (ENSCSAG00000016618) Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00910000147630 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f.d #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00910000147630 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f.d #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Olive baboon MODERN SPECIES 4 RABL6 (ENSPANG00000026165) AJM1 (ENSPANG00000051433) ENSPANG00000042007 ENSPANG00000026162 #7 TRAF2 (ENSPANG00000026161) #8 FBXW5 (ENSPANG00000026160) #9 C8G (ENSPANG00000026258) #11 LCN12 (ENSPANG00000026259) PTGDS (ENSPANG00000026267) #13 PAXX (ENSPANG00000026266) #15 CLIC3 (ENSPANG00000026265) #16 FUT7 (ENSPANG00000043249) #18 NPDC1 (ENSPANG00000026262) #19 ENTPD2 (ENSPANG00000026261) #20 ENSPANG00000026260 #21 UAP1L1 (ENSPANG00000026288) #22 ENSPANG00000047739 #23 GRIN1 (ENSPANG00000026295) #25 LRRC26 (ENSPANG00000026294) #26 TMEM210 (ENSPANG00000026293) #27 ANAPC2 (ENSPANG00000026291) #28 SSNA1 (ENSPANG00000026290) #29 ENSPANG00000037616 TMEM203 (ENSPANG00000019792) #31 ENSPANG00000041143 RNF208 (ENSPANG00000014062) #33 CYSRT1 (ENSPANG00000001583) #34 SLC34A3 (ENSPANG00000026343) #36 TUBB4B (ENSPANG00000016083) #37 FAM166A (ENSPANG00000026341) STPG3 (ENSPANG00000026340) Cercopithecinae_d ANCESTRAL SPECIES 59 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00910000147630 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f.d #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Sooty mangabey MODERN SPECIES 572 TRAF2 (ENSCATG00000000039) #8 FBXW5 (ENSCATG00000007828) #9 ENSCATG00000033500 #10 C8G (ENSCATG00000033528) #11 ENSCATG00000043845 PTGDS (ENSCATG00000020005) #13 ENSCATG00000038562 #14 PAXX (ENSCATG00000042889) #15 CLIC3 (ENSCATG00000045375) #16 ENSCATG00000007111 ABCA2 (ENSCATG00000042617) #17 FUT7 (ENSCATG00000037235) #18 NPDC1 (ENSCATG00000029068) #19 ENTPD2 (ENSCATG00000039126) #20 SAPCD2 (ENSCATG00000045112) #21 UAP1L1 (ENSCATG00000033693) #22 MAN1B1 (ENSCATG00000032737) #23 DPP7 (ENSCATG00000041366) #24 GRIN1 (ENSCATG00000041954) #25 LRRC26 (ENSCATG00000045338) #26 TMEM210 (ENSCATG00000039079) #27 ANAPC2 (ENSCATG00000040018) #28 SSNA1 (ENSCATG00000029507) #29 TPRN (ENSCATG00000044806) #30 TMEM203 (ENSCATG00000018034) #31 NDOR1 (ENSCATG00000022392) #32 RNF208 (ENSCATG00000014151) #33 CYSRT1 (ENSCATG00000040023) #34 RNF224 (ENSCATG00000040152) #35 SLC34A3 (ENSCATG00000045084) #36 TUBB4B (ENSCATG00000036347) #37 Drill MODERN SPECIES 918 FBXW5 (ENSMLEG00000003995) #9 C8G (ENSMLEG00000041653) #11 ENSMLEG00000017866 #10 LCN12 (ENSMLEG00000019326) PTGDS (ENSMLEG00000034396) #13 ENSMLEG00000022907 #14 PAXX (ENSMLEG00000042499) #15 CLIC3 (ENSMLEG00000032408) #16 ENSMLEG00000000769 ENSMLEG00000031764 #17 ENSMLEG00000031642 #17 FUT7 (ENSMLEG00000041992) #18 NPDC1 (ENSMLEG00000038231) #19 ENTPD2 (ENSMLEG00000042300) #20 SAPCD2 (ENSMLEG00000031929) #21 UAP1L1 (ENSMLEG00000040116) #22 MAN1B1 (ENSMLEG00000011326) #23 ENSMLEG00000034409 #24 ENSMLEG00000033661 #25 ENSMLEG00000003923 #25 TMEM210 (ENSMLEG00000040784) #27 ANAPC2 (ENSMLEG00000005040) #28 SSNA1 (ENSMLEG00000042628) #29 TPRN (ENSMLEG00000036328) #30 NDOR1 (ENSMLEG00000035151) #32 TMEM203 (ENSMLEG00000016017) #31 RNF208 (ENSMLEG00000027821) #33 CYSRT1 (ENSMLEG00000025831) #34 RNF224 (ENSMLEG00000032575) #35 SLC34A3 (ENSMLEG00000043317) #36 ENSMLEG00000008939 ##37 Macaca ANCESTRAL SPECIES 10 ENSGT00940000162046 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f.c.a #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Macaca_a ANCESTRAL SPECIES 10 ENSGT00390000002738.a.i.a ENSGT00940000162046 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f.c.a #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Crab-eating macaque MODERN SPECIES 6 CCDC183 (ENSMFAG00000007280) ENSMFAG00000065092 ENSMFAG00000056778 ENSMFAG00000043136 PHPT1 (ENSMFAG00000000240) MAMDC4 (ENSMFAG00000000794) ENSMFAG00000003426 #7 PTGDS (ENSMFAG00000003811) #13 CLIC3 (ENSMFAG00000063525) #16 FUT7 (ENSMFAG00000031638) #18 PAXX (ENSMFAG00000029287) #15 NPDC1 (ENSMFAG00000003246) #19 ENTPD2 (ENSMFAG00000043619) #20 ENSMFAG00000063821 #21 ENSMFAG00000065691 ENSMFAG00000031392 #22 MAN1B1 (ENSMFAG00000042595) #23 DPP7 (ENSMFAG00000042206) #24 ENSMFAG00000060355 GRIN1 (ENSMFAG00000030914) #25 LRRC26 (ENSMFAG00000059441) #26 TMEM210 (ENSMFAG00000037356) #27 ANAPC2 (ENSMFAG00000039218) #28 SSNA1 (ENSMFAG00000003411) #29 TMEM203 (ENSMFAG00000060923) #31 NDOR1 (ENSMFAG00000039422) #32 CYSRT1 (ENSMFAG00000040805) #34 RNF224 (ENSMFAG00000001161) #35 SLC34A3 (ENSMFAG00000040546) #36 TUBB4B (ENSMFAG00000021762) #37 FAM166A (ENSMFAG00000033692) Rhesus MODERN SPECIES 6 AJM1 (ENSMMUG00000005046) PHPT1 (ENSMMUG00000005047) EDF1 (ENSMMUG00000005051) #7 TRAF2 (ENSMMUG00000011527) #8 FBXW5 (ENSMMUG00000011528) #9 C8G (ENSMMUG00000032142) #11 LCN12 (ENSMMUG00000021428) PTGDS (ENSMMUG00000052688) #13 PAXX (ENSMMUG00000021432) #15 CLIC3 (ENSMMUG00000021431) #16 ABCA2 (ENSMMUG00000021434) #17 FUT7 (ENSMMUG00000040671) #18 NPDC1 (ENSMMUG00000017860) #19 ENTPD2 (ENSMMUG00000005056) #20 SAPCD2 (ENSMMUG00000056519) #21 UAP1L1 (ENSMMUG00000047506) #22 MAN1B1 (ENSMMUG00000008036) #23 DPP7 (ENSMMUG00000022750) #24 GRIN1 (ENSMMUG00000001661) #25 LRRC26 (ENSMMUG00000063598) #26 TMEM210 (ENSMMUG00000001667) #27 ANAPC2 (ENSMMUG00000001669) #28 SSNA1 (ENSMMUG00000047902) #29 TPRN (ENSMMUG00000001677) #30 TMEM203 (ENSMMUG00000046202) #31 NDOR1 (ENSMMUG00000018107) #32 RNF208 (ENSMMUG00000023185) #33 CYSRT1 (ENSMMUG00000050131) #34 SLC34A3 (ENSMMUG00000060673) #36 FAM166A (ENSMMUG00000060507) STPG3 (ENSMMUG00000032151) Pig-tailed macaque MODERN SPECIES 490 MAMDC4 (ENSMNEG00000033930) EDF1 (ENSMNEG00000036130) #7 TRAF2 (ENSMNEG00000020681) #8 FBXW5 (ENSMNEG00000032355) #9 ENSMNEG00000039377 #10 C8G (ENSMNEG00000029073) #11 LCN12 (ENSMNEG00000029550) PTGDS (ENSMNEG00000034581) #13 CLIC3 (ENSMNEG00000033341) #16 PAXX (ENSMNEG00000038986) #15 ABCA2 (ENSMNEG00000036389) #17 FUT7 (ENSMNEG00000029936) #18 NPDC1 (ENSMNEG00000039804) #19 ENTPD2 (ENSMNEG00000042679) #20 SAPCD2 (ENSMNEG00000030414) #21 UAP1L1 (ENSMNEG00000037452) #22 MAN1B1 (ENSMNEG00000044728) #23 DPP7 (ENSMNEG00000029772) #24 GRIN1 (ENSMNEG00000031771) #25 LRRC26 (ENSMNEG00000045226) #26 ANAPC2 (ENSMNEG00000028093) #28 TMEM210 (ENSMNEG00000015555) #27 SSNA1 (ENSMNEG00000044192) #29 TPRN (ENSMNEG00000038162) #30 TMEM203 (ENSMNEG00000024232) #31 NDOR1 (ENSMNEG00000000380) #32 RNF208 (ENSMNEG00000016264) #33 CYSRT1 (ENSMNEG00000037699) #34 RNF224 (ENSMNEG00000033270) #35 SLC34A3 (ENSMNEG00000043166) #36 TUBB4B (ENSMNEG00000038300) #37 Rhinopithecus ANCESTRAL SPECIES 2 ENSGT00390000002738.a.i.b ENSGT00940000162046 ENSGT00390000008519.x #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072.f.b #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00860000136271 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Golden snub-nosed monkey MODERN SPECIES 1695 ENSRROG00000011056 MAMDC4 (ENSRROG00000028994) EDF1 (ENSRROG00000036689) #7 TRAF2 (ENSRROG00000033044) #8 FBXW5 (ENSRROG00000029663) #9 C8G (ENSRROG00000042966) #11 LCN12 (ENSRROG00000038709) PTGDS (ENSRROG00000036556) #13 PAXX (ENSRROG00000044963) #15 CLIC3 (ENSRROG00000042809) #16 ABCA2 (ENSRROG00000045181) #17 FUT7 (ENSRROG00000039808) #18 NPDC1 (ENSRROG00000014333) #19 ENTPD2 (ENSRROG00000040483) #20 SAPCD2 (ENSRROG00000039152) #21 ENSRROG00000039065 #22 MAN1B1 (ENSRROG00000044497) #23 DPP7 (ENSRROG00000030437) #24 GRIN1 (ENSRROG00000034371) #25 LRRC26 (ENSRROG00000044845) #26 TMEM210 (ENSRROG00000042134) #27 ANAPC2 (ENSRROG00000035823) #28 SSNA1 (ENSRROG00000030836) #29 TPRN (ENSRROG00000039355) #30 ENSRROG00000038803 TMEM203 (ENSRROG00000011174) #31 NDOR1 (ENSRROG00000033862) #32 RNF208 (ENSRROG00000001430) #33 CYSRT1 (ENSRROG00000036230) #34 RNF224 (ENSRROG00000017119) #35 SLC34A3 (ENSRROG00000033517) #36 Black snub-nosed monkey MODERN SPECIES 1117 ENSRBIG00000031349 MAMDC4 (ENSRBIG00000038570) EDF1 (ENSRBIG00000028839) #7 TRAF2 (ENSRBIG00000039392) #8 FBXW5 (ENSRBIG00000028436) #9 C8G (ENSRBIG00000007301) #11 LCN12 (ENSRBIG00000041425) PTGDS (ENSRBIG00000031470) #13 PAXX (ENSRBIG00000041701) #15 CLIC3 (ENSRBIG00000043941) #16 ABCA2 (ENSRBIG00000043665) #17 FUT7 (ENSRBIG00000027396) #18 NPDC1 (ENSRBIG00000032097) #19 ENTPD2 (ENSRBIG00000032585) #20 SAPCD2 (ENSRBIG00000017086) #21 ENSRBIG00000036004 #22 MAN1B1 (ENSRBIG00000041575) #23 DPP7 (ENSRBIG00000014433) #24 GRIN1 (ENSRBIG00000042946) #25 LRRC26 (ENSRBIG00000040178) #26 TMEM210 (ENSRBIG00000041900) #27 ANAPC2 (ENSRBIG00000041051) #28 SSNA1 (ENSRBIG00000010941) #29 TPRN (ENSRBIG00000043110) #30 ENSRBIG00000014667 TMEM203 (ENSRBIG00000004461) #31 NDOR1 (ENSRBIG00000035758) #32 ENSRBIG00000033883 #34 RNF224 (ENSRBIG00000043650) #35 SLC34A3 (ENSRBIG00000037164) #36 ENSRBIG00000038236 ##37 Tarsier MODERN SPECIES 1643 UAP1L1 (ENSTSYG00000028074) #22 Strepsirrhini ANCESTRAL SPECIES 8 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Lemuriformes ANCESTRAL SPECIES 12 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Lemuriformes_a ANCESTRAL SPECIES 2 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00390000016760 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Coquerels sifaka MODERN SPECIES 599 MAMDC4 (ENSPCOG00000027334) EDF1 (ENSPCOG00000009350) #7 TRAF2 (ENSPCOG00000019294) #8 FBXW5 (ENSPCOG00000017416) #9 C8G (ENSPCOG00000022183) #11 LCN12 (ENSPCOG00000018067) PTGDS (ENSPCOG00000026041) #13 LCNL1 (ENSPCOG00000020674) PAXX (ENSPCOG00000019383) #15 CLIC3 (ENSPCOG00000015177) #16 ABCA2 (ENSPCOG00000021211) #17 FUT7 (ENSPCOG00000022422) #18 NPDC1 (ENSPCOG00000015086) #19 ENTPD2 (ENSPCOG00000024523) #20 SAPCD2 (ENSPCOG00000009183) #21 UAP1L1 (ENSPCOG00000022537) #22 DPP7 (ENSPCOG00000015154) #24 MAN1B1 (ENSPCOG00000023379) #23 GRIN1 (ENSPCOG00000022220) #25 LRRC26 (ENSPCOG00000025803) #26 TMEM210 (ENSPCOG00000005239) #27 ANAPC2 (ENSPCOG00000016551) #28 SSNA1 (ENSPCOG00000022436) #29 TPRN (ENSPCOG00000021944) #30 TMEM203 (ENSPCOG00000011268) #31 NDOR1 (ENSPCOG00000017736) #32 RNF208 (ENSPCOG00000026627) #33 CYSRT1 (ENSPCOG00000025629) #34 RNF224 (ENSPCOG00000014998) #35 SLC34A3 (ENSPCOG00000015740) #36 TUBB4B (ENSPCOG00000021987) #37 Greater bamboo lemur MODERN SPECIES 293 PHPT1 (ENSPSMG00000006952) EDF1 (ENSPSMG00000006917) #7 TRAF2 (ENSPSMG00000006893) #8 FBXW5 (ENSPSMG00000006883) #9 C8G (ENSPSMG00000006875) #11 LCN12 (ENSPSMG00000006863) PTGDS (ENSPSMG00000006847) #13 PAXX (ENSPSMG00000006835) #15 CLIC3 (ENSPSMG00000006804) #16 ENSPSMG00000006793 #17 ENSPSMG00000006787 #17 FUT7 (ENSPSMG00000006780) #18 ENSPSMG00000006750 ENTPD2 (ENSPSMG00000006743) #20 SAPCD2 (ENSPSMG00000006725) #21 UAP1L1 (ENSPSMG00000006715) #22 DPP7 (ENSPSMG00000006685) #24 MAN1B1 (ENSPSMG00000006650) #23 ENSPSMG00000006623 ENSPSMG00000006616 #25 ENSPSMG00000006611 #25 LRRC26 (ENSPSMG00000006604) #26 TMEM210 (ENSPSMG00000006598) #27 ANAPC2 (ENSPSMG00000006596) #28 SSNA1 (ENSPSMG00000006574) #29 ENSPSMG00000006571 #30 TMEM203 (ENSPSMG00000006569) #31 NDOR1 (ENSPSMG00000006547) #32 ENSPSMG00000006512 RNF208 (ENSPSMG00000006509) #33 CYSRT1 (ENSPSMG00000006502) #34 Mouse lemur MODERN SPECIES 1 ENSMICG00000016476 MAMDC4 (ENSMICG00000016485) EDF1 (ENSMICG00000016498) #7 TRAF2 (ENSMICG00000045680) #8 FBXW5 (ENSMICG00000033952) #9 C8G (ENSMICG00000029632) #11 LCN12 (ENSMICG00000043817) PTGDS (ENSMICG00000034872) #13 PAXX (ENSMICG00000043009) #15 CLIC3 (ENSMICG00000029042) #16 ABCA2 (ENSMICG00000033228) #17 FUT7 (ENSMICG00000030899) #18 NPDC1 (ENSMICG00000033933) #19 ENTPD2 (ENSMICG00000008859) #20 SAPCD2 (ENSMICG00000046803) #21 UAP1L1 (ENSMICG00000036839) #22 DPP7 (ENSMICG00000006205) #24 MAN1B1 (ENSMICG00000037275) #23 GRIN1 (ENSMICG00000035705) #25 LRRC26 (ENSMICG00000042486) #26 TMEM210 (ENSMICG00000006065) #27 ANAPC2 (ENSMICG00000006069) #28 SSNA1 (ENSMICG00000046295) #29 TPRN (ENSMICG00000006079) #30 TMEM203 (ENSMICG00000033917) #31 NDOR1 (ENSMICG00000006082) #32 RNF208 (ENSMICG00000037815) #33 CYSRT1 (ENSMICG00000045827) #34 RNF224 (ENSMICG00000043812) #35 SLC34A3 (ENSMICG00000010933) #36 TUBB4B (ENSMICG00000031249) #37 Bushbaby MODERN SPECIES 202 PHPT1 (ENSOGAG00000032005) MAMDC4 (ENSOGAG00000016460) TRAF2 (ENSOGAG00000013187) #8 FBXW5 (ENSOGAG00000013190) #9 C8G (ENSOGAG00000013195) #11 LCN12 (ENSOGAG00000030577) PTGDS (ENSOGAG00000013197) #13 ENSOGAG00000025651 PAXX (ENSOGAG00000013200) #15 CLIC3 (ENSOGAG00000013205) #16 ABCA2 (ENSOGAG00000032674) #17 FUT7 (ENSOGAG00000031745) #18 NPDC1 (ENSOGAG00000002689) #19 ENTPD2 (ENSOGAG00000002692) #20 SAPCD2 (ENSOGAG00000034370) #21 UAP1L1 (ENSOGAG00000004161) #22 DPP7 (ENSOGAG00000014568) #24 ENSOGAG00000029815 #23 GRIN1 (ENSOGAG00000026952) #25 LRRC26 (ENSOGAG00000025893) #26 TMEM210 (ENSOGAG00000005906) #27 ANAPC2 (ENSOGAG00000005908) #28 SSNA1 (ENSOGAG00000005914) #29 TPRN (ENSOGAG00000033258) #30 TMEM203 (ENSOGAG00000028885) #31 NDOR1 (ENSOGAG00000005920) #32 RNF208 (ENSOGAG00000005922) #33 CYSRT1 (ENSOGAG00000028170) #34 SLC34A3 (ENSOGAG00000005923) #36 TUBB4B (ENSOGAG00000005927) #37 FAM166A (ENSOGAG00000005930) Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Glires ANCESTRAL SPECIES 9 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Rodentia ANCESTRAL SPECIES 9 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Rodentia_A ANCESTRAL SPECIES 11 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Hystricomorpha ANCESTRAL SPECIES 7 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Hystricomorpha_a ANCESTRAL SPECIES 5 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Guinea pig MODERN SPECIES 18 ENSCPOG00000033948 PHPT1 (ENSCPOG00000032818) EDF1 (ENSCPOG00000020393) #7 TRAF2 (ENSCPOG00000004243) #8 FBXW5 (ENSCPOG00000002830) #9 C8G (ENSCPOG00000002834) #11 ENSCPOG00000022323 PTGDS (ENSCPOG00000033226) #13 PAXX (ENSCPOG00000019861) #15 CLIC3 (ENSCPOG00000036472) #16 ABCA2 (ENSCPOG00000014498) #17 FUT7 (ENSCPOG00000032043) #18 NPDC1 (ENSCPOG00000014094) #19 ENTPD2 (ENSCPOG00000023108) #20 SAPCD2 (ENSCPOG00000009347) #21 UAP1L1 (ENSCPOG00000009344) #22 DPP7 (ENSCPOG00000019270) #24 MAN1B1 (ENSCPOG00000023581) #23 GRIN1 (ENSCPOG00000012581) #25 LRRC26 (ENSCPOG00000031975) #26 TMEM210 (ENSCPOG00000019860) #27 ANAPC2 (ENSCPOG00000009756) #28 SSNA1 (ENSCPOG00000034909) #29 TPRN (ENSCPOG00000034478) #30 TMEM203 (ENSCPOG00000023800) #31 NDOR1 (ENSCPOG00000009779) #32 RNF208 (ENSCPOG00000036003) #33 CYSRT1 (ENSCPOG00000026441) #34 SLC34A3 (ENSCPOG00000009791) #36 TUBB4B (ENSCPOG00000031843) #37 FAM166A (ENSCPOG00000009796) Hystricomorpha_b ANCESTRAL SPECIES 36 ENSGT00390000016543 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Degu MODERN SPECIES 164 AJM1 (ENSODEG00000015654) PHPT1 (ENSODEG00000015162) MAMDC4 (ENSODEG00000014929) ENSODEG00000015447 #7 TRAF2 (ENSODEG00000015533) #8 ENSODEG00000014724 #9 LCN12 (ENSODEG00000014923) PTGDS (ENSODEG00000015463) #13 PAXX (ENSODEG00000015128) #15 CLIC3 (ENSODEG00000014543) #16 ABCA2 (ENSODEG00000015251) #17 FUT7 (ENSODEG00000020269) #18 NPDC1 (ENSODEG00000014632) #19 ENTPD2 (ENSODEG00000014369) #20 SAPCD2 (ENSODEG00000015491) #21 UAP1L1 (ENSODEG00000014947) #22 DPP7 (ENSODEG00000014505) #24 MAN1B1 (ENSODEG00000014488) #23 GRIN1 (ENSODEG00000016112) #25 LRRC26 (ENSODEG00000013944) #26 TMEM210 (ENSODEG00000014471) #27 ANAPC2 (ENSODEG00000015025) #28 SSNA1 (ENSODEG00000015066) #29 TPRN (ENSODEG00000014622) #30 NDOR1 (ENSODEG00000015210) #32 ENSODEG00000020361 SLC34A3 (ENSODEG00000014187) #36 TUBB4B (ENSODEG00000015427) #37 FAM166A (ENSODEG00000014315) STPG3 (ENSODEG00000014179) NELFB (ENSODEG00000015049) Long-tailed chinchilla MODERN SPECIES 220 RABL6 (ENSCLAG00000005796) AJM1 (ENSCLAG00000006750) PHPT1 (ENSCLAG00000006935) MAMDC4 (ENSCLAG00000007572) ENSCLAG00000009894 #7 TRAF2 (ENSCLAG00000010303) #8 FBXW5 (ENSCLAG00000006688) #9 LCN12 (ENSCLAG00000006537) PTGDS (ENSCLAG00000006819) #13 PAXX (ENSCLAG00000007451) #15 CLIC3 (ENSCLAG00000007954) #16 ABCA2 (ENSCLAG00000008162) #17 FUT7 (ENSCLAG00000013275) #18 NPDC1 (ENSCLAG00000004406) #19 ENTPD2 (ENSCLAG00000006261) #20 UAP1L1 (ENSCLAG00000008188) #22 DPP7 (ENSCLAG00000008918) #24 MAN1B1 (ENSCLAG00000013391) #23 GRIN1 (ENSCLAG00000008386) #25 LRRC26 (ENSCLAG00000004796) #26 TMEM210 (ENSCLAG00000004973) #27 ANAPC2 (ENSCLAG00000005987) #28 SSNA1 (ENSCLAG00000004612) #29 TPRN (ENSCLAG00000007574) #30 TMEM203 (ENSCLAG00000017753) #31 NDOR1 (ENSCLAG00000006332) #32 RNF208 (ENSCLAG00000017701) #33 CYSRT1 (ENSCLAG00000007413) #34 RNF224 (ENSCLAG00000007639) #35 SLC34A3 (ENSCLAG00000005009) #36 TUBB4B (ENSCLAG00000007043) #37 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000040961 MAMDC4 (ENSHGLG00000014599) EDF1 (ENSHGLG00000014528) #7 TRAF2 (ENSHGLG00000014367) #8 FBXW5 (ENSHGLG00000018459) #9 C8G (ENSHGLG00000012991) #11 ENSHGLG00000012411 #13 ENSHGLG00000048876 ENSHGLG00000048674 #15 CLIC3 (ENSHGLG00000019357) #16 ABCA2 (ENSHGLG00000010424) #17 FUT7 (ENSHGLG00000019096) #18 NPDC1 (ENSHGLG00000016494) #19 ENTPD2 (ENSHGLG00000013712) #20 SAPCD2 (ENSHGLG00000013081) #21 UAP1L1 (ENSHGLG00000014350) #22 DPP7 (ENSHGLG00000012051) #24 GRIN1 (ENSHGLG00000009960) #25 ANAPC2 (ENSHGLG00000012889) #28 SSNA1 (ENSHGLG00000012331) #29 TPRN (ENSHGLG00000011593) #30 ENSHGLG00000020656 #31 Sciuridae ANCESTRAL SPECIES 6 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Marmotini ANCESTRAL SPECIES 1 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Marmotini_b ANCESTRAL SPECIES 2 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Arctic ground squirrel MODERN SPECIES 156 PHPT1 (ENSUPAG00010006497) MAMDC4 (ENSUPAG00010006442) EDF1 (ENSUPAG00010006437) #7 TRAF2 (ENSUPAG00010006407) #8 FBXW5 (ENSUPAG00010006399) #9 C8G (ENSUPAG00010006391) #11 LCN12 (ENSUPAG00010006378) PTGDS (ENSUPAG00010006372) #13 ENSUPAG00010006364 #15 CLIC3 (ENSUPAG00010006357) #16 ENSUPAG00010006296 #17 FUT7 (ENSUPAG00010006288) #18 NPDC1 (ENSUPAG00010006257) #19 ENTPD2 (ENSUPAG00010006251) #20 SAPCD2 (ENSUPAG00010006246) #21 UAP1L1 (ENSUPAG00010006239) #22 DPP7 (ENSUPAG00010006226) #24 MAN1B1 (ENSUPAG00010006185) #23 ENSUPAG00010006176 #25 ENSUPAG00010006171 #25 LRRC26 (ENSUPAG00010006170) #26 TMEM210 (ENSUPAG00010006162) #27 ANAPC2 (ENSUPAG00010006139) #28 SSNA1 (ENSUPAG00010006131) #29 TPRN (ENSUPAG00010006122) #30 TMEM203 (ENSUPAG00010006119) #31 NDOR1 (ENSUPAG00010006072) #32 RNF208 (ENSUPAG00010006067) #33 CYSRT1 (ENSUPAG00010006061) #34 RNF224 (ENSUPAG00010006059) #35 SLC34A3 (ENSUPAG00010006039) #36 Squirrel MODERN SPECIES 269 MAMDC4 (ENSSTOG00000015455) EDF1 (ENSSTOG00000025154) #7 TRAF2 (ENSSTOG00000012096) #8 FBXW5 (ENSSTOG00000021979) #9 C8G (ENSSTOG00000014108) #11 LCN12 (ENSSTOG00000024098) PTGDS (ENSSTOG00000019805) #13 ENSSTOG00000019684 PAXX (ENSSTOG00000025601) #15 CLIC3 (ENSSTOG00000023657) #16 ABCA2 (ENSSTOG00000013825) #17 FUT7 (ENSSTOG00000013862) #18 NPDC1 (ENSSTOG00000019775) #19 ENTPD2 (ENSSTOG00000010778) #20 SAPCD2 (ENSSTOG00000010785) #21 UAP1L1 (ENSSTOG00000010790) #22 DPP7 (ENSSTOG00000008730) #24 MAN1B1 (ENSSTOG00000021513) #23 GRIN1 (ENSSTOG00000026607) #25 LRRC26 (ENSSTOG00000027229) #26 TMEM210 (ENSSTOG00000003550) #27 ANAPC2 (ENSSTOG00000004113) #28 SSNA1 (ENSSTOG00000004137) #29 TPRN (ENSSTOG00000027939) #30 TMEM203 (ENSSTOG00000020912) #31 NDOR1 (ENSSTOG00000004178) #32 CYSRT1 (ENSSTOG00000033064) #34 SLC34A3 (ENSSTOG00000014451) #36 TUBB4B (ENSSTOG00000021231) #37 FAM166A (ENSSTOG00000014459) STPG3 (ENSSTOG00000014467) Alpin marmot MODERN SPECIES 106 RABL6 (ENSMMMG00000009622) PHPT1 (ENSMMMG00000009614) EDF1 (ENSMMMG00000009463) #7 TRAF2 (ENSMMMG00000009429) #8 FBXW5 (ENSMMMG00000009406) #9 C8G (ENSMMMG00000009391) #11 LCN12 (ENSMMMG00000009372) PTGDS (ENSMMMG00000009339) #13 PAXX (ENSMMMG00000009327) #15 CLIC3 (ENSMMMG00000009308) #16 ENSMMMG00000009264 #17 FUT7 (ENSMMMG00000009252) #18 NPDC1 (ENSMMMG00000008941) #19 ENTPD2 (ENSMMMG00000008921) #20 SAPCD2 (ENSMMMG00000008899) #21 UAP1L1 (ENSMMMG00000008871) #22 DPP7 (ENSMMMG00000008858) #24 MAN1B1 (ENSMMMG00000008828) #23 ENSMMMG00000008815 #25 ENSMMMG00000008804 #25 LRRC26 (ENSMMMG00000008800) #26 TMEM210 (ENSMMMG00000008792) #27 ANAPC2 (ENSMMMG00000008771) #28 SSNA1 (ENSMMMG00000008759) #29 ENSMMMG00000008756 #30 TMEM203 (ENSMMMG00000008754) #31 NDOR1 (ENSMMMG00000008644) #32 ENSMMMG00000008639 RNF208 (ENSMMMG00000008635) #33 CYSRT1 (ENSMMMG00000008629) #34 RNF224 (ENSMMMG00000008626) #35 Eurasian red squirrel MODERN SPECIES 6 AJM1 (ENSSVLG00005016763) PHPT1 (ENSSVLG00005016779) ENSSVLG00005017849 #7 TRAF2 (ENSSVLG00005017919) #8 FBXW5 (ENSSVLG00005017960) #9 C8G (ENSSVLG00005017987) #11 LCN12 (ENSSVLG00005018084) PTGDS (ENSSVLG00005018156) #13 PAXX (ENSSVLG00005018285) #15 CLIC3 (ENSSVLG00005018309) #16 ENSSVLG00005018392 #17 FUT7 (ENSSVLG00005018791) #18 NPDC1 (ENSSVLG00005018818) #19 ENTPD2 (ENSSVLG00005018860) #20 SAPCD2 (ENSSVLG00005018916) #21 UAP1L1 (ENSSVLG00005019001) #22 DPP7 (ENSSVLG00005019137) #24 MAN1B1 (ENSSVLG00005019401) #23 ENSSVLG00005019495 #25 ENSSVLG00005019547 #25 LRRC26 (ENSSVLG00005019594) #26 TMEM210 (ENSSVLG00005019652) #27 ANAPC2 (ENSSVLG00005019762) #28 SSNA1 (ENSSVLG00005019908) #29 TPRN (ENSSVLG00005019950) #30 TMEM203 (ENSSVLG00005019990) #31 NDOR1 (ENSSVLG00005020031) #32 ENSSVLG00005020114 RNF208 (ENSSVLG00005020130) #33 CYSRT1 (ENSSVLG00005020147) #34 RNF224 (ENSSVLG00005020170) #35 Rodentia_B ANCESTRAL SPECIES 6 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Myomorpha ANCESTRAL SPECIES 1 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Muroidea ANCESTRAL SPECIES 1 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Murinae ANCESTRAL SPECIES 1 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Mus ANCESTRAL SPECIES 1 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Mus_A ANCESTRAL SPECIES ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Mus_B ANCESTRAL SPECIES 1 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Mouse MODERN SPECIES 11 Phpt1 (ENSMUSG00000036504) Mamdc4 (ENSMUSG00000026941) Edf1 (ENSMUSG00000015092) #7 Traf2 (ENSMUSG00000026942) #8 Fbxw5 (ENSMUSG00000015095) #9 C8g (ENSMUSG00000015083) #11 Lcn12 (ENSMUSG00000026943) Ptgds (ENSMUSG00000015090) #13 Clic3 (ENSMUSG00000015093) #16 Paxx (ENSMUSG00000047617) #15 Abca2 (ENSMUSG00000026944) #17 Fut7 (ENSMUSG00000036587) #18 Npdc1 (ENSMUSG00000015094) #19 Entpd2 (ENSMUSG00000015085) #20 Sapcd2 (ENSMUSG00000026955) #21 Uap1l1 (ENSMUSG00000026956) #22 Dpp7 (ENSMUSG00000026958) #24 Man1b1 (ENSMUSG00000036646) #23 Grin1 (ENSMUSG00000026959) #25 Lrrc26 (ENSMUSG00000026961) #26 Tmem210 (ENSMUSG00000026963) #27 Anapc2 (ENSMUSG00000026965) #28 Ssna1 (ENSMUSG00000026966) #29 Tprn (ENSMUSG00000048707) #30 Tmem203 (ENSMUSG00000078201) #31 Ndor1 (ENSMUSG00000115074) Ndor1 (ENSMUSG00000006471) #32 Ndor1 (ENSMUSG00000115018) Rnf208 (ENSMUSG00000044628) #33 Cysrt1 (ENSMUSG00000036731) #34 Rnf224 (ENSMUSG00000089953) #35 Mus_C ANCESTRAL SPECIES ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Steppe mouse MODERN SPECIES 2889 Ajm1 (ENSMSIG00000022471) Phpt1 (ENSMSIG00000022477) Edf1 (ENSMSIG00000022614) #7 Traf2 (ENSMSIG00000022633) #8 Fbxw5 (ENSMSIG00000022664) #9 C8g (ENSMSIG00000022687) #11 Lcn12 (ENSMSIG00000022732) Ptgds (ENSMSIG00000022773) #13 Paxx (ENSMSIG00000022794) #15 Clic3 (ENSMSIG00000022819) #16 Abca2 (ENSMSIG00000022845) #17 Fut7 (ENSMSIG00000022998) #18 Npdc1 (ENSMSIG00000023008) #19 Entpd2 (ENSMSIG00000023052) #20 Sapcd2 (ENSMSIG00000023070) #21 Uap1l1 (ENSMSIG00000023104) #22 Dpp7 (ENSMSIG00000023133) #24 Man1b1 (ENSMSIG00000023173) #23 Grin1 (ENSMSIG00000023294) #25 Lrrc26 (ENSMSIG00000023364) #26 Tmem210 (ENSMSIG00000023378) #27 Anapc2 (ENSMSIG00000023390) #28 Ssna1 (ENSMSIG00000023430) #29 Tprn (ENSMSIG00000023447) #30 Tmem203 (ENSMSIG00000023470) #31 Ndor1 (ENSMSIG00000023474) #32 Rnf208 (ENSMSIG00000023530) #33 Cysrt1 (ENSMSIG00000023536) #34 Rnf224 (ENSMSIG00000023541) #35 Slc34a3 (ENSMSIG00000023551) #36 Tubb4b (ENSMSIG00000023582) #37 spretus MODERN SPECIES 11 Phpt1 (MGP_SPRETEiJ_G0024201) Mamdc4 (MGP_SPRETEiJ_G0024200) Edf1 (MGP_SPRETEiJ_G0024199) #7 Traf2 (MGP_SPRETEiJ_G0024198) #8 Fbxw5 (MGP_SPRETEiJ_G0024197) #9 C8g (MGP_SPRETEiJ_G0024196) #11 Lcn12 (MGP_SPRETEiJ_G0024195) Ptgds (MGP_SPRETEiJ_G0024194) #13 Clic3 (MGP_SPRETEiJ_G0024193) #16 Paxx (MGP_SPRETEiJ_G0024192) #15 Abca2 (MGP_SPRETEiJ_G0024191) #17 Fut7 (MGP_SPRETEiJ_G0024190) #18 Npdc1 (MGP_SPRETEiJ_G0024189) #19 Entpd2 (MGP_SPRETEiJ_G0024188) #20 Sapcd2 (MGP_SPRETEiJ_G0024187) #21 Uap1l1 (MGP_SPRETEiJ_G0024186) #22 Dpp7 (MGP_SPRETEiJ_G0024185) #24 Man1b1 (MGP_SPRETEiJ_G0024184) #23 Lrrc26 (MGP_SPRETEiJ_G0024183) #26 Tmem210 (MGP_SPRETEiJ_G0024182) #27 Grin1 (MGP_SPRETEiJ_G0024181) #25 Anapc2 (MGP_SPRETEiJ_G0024180) #28 Ssna1 (MGP_SPRETEiJ_G0024179) #29 Tprn (MGP_SPRETEiJ_G0024178) #30 Tmem203 (MGP_SPRETEiJ_G0024177) #31 Ndor1 (MGP_SPRETEiJ_G0024176) #32 Rnf208 (MGP_SPRETEiJ_G0024175) #33 Cysrt1 (MGP_SPRETEiJ_G0024174) #34 Rnf224 (MGP_SPRETEiJ_G0024173) #35 Slc34a3 (MGP_SPRETEiJ_G0024172) #36 MGP_SPRETEiJ_G0024171 ##37 Ryukyu mouse MODERN SPECIES 11 Phpt1 (MGP_CAROLIEiJ_G0023284) Mamdc4 (MGP_CAROLIEiJ_G0023283) Edf1 (MGP_CAROLIEiJ_G0023282) #7 Traf2 (MGP_CAROLIEiJ_G0023281) #8 Fbxw5 (MGP_CAROLIEiJ_G0023280) #9 C8g (MGP_CAROLIEiJ_G0023279) #11 Lcn12 (MGP_CAROLIEiJ_G0023278) Ptgds (MGP_CAROLIEiJ_G0023277) #13 Clic3 (MGP_CAROLIEiJ_G0023276) #16 Paxx (MGP_CAROLIEiJ_G0023275) #15 Abca2 (MGP_CAROLIEiJ_G0023274) #17 Fut7 (MGP_CAROLIEiJ_G0023273) #18 Npdc1 (MGP_CAROLIEiJ_G0023272) #19 Entpd2 (MGP_CAROLIEiJ_G0023271) #20 MGP_CAROLIEiJ_G0023270 #21 Uap1l1 (MGP_CAROLIEiJ_G0023269) #22 Dpp7 (MGP_CAROLIEiJ_G0023268) #24 Man1b1 (MGP_CAROLIEiJ_G0023267) #23 Grin1 (MGP_CAROLIEiJ_G0023266) #25 Lrrc26 (MGP_CAROLIEiJ_G0023265) #26 Tmem210 (MGP_CAROLIEiJ_G0023264) #27 Anapc2 (MGP_CAROLIEiJ_G0023263) #28 Ssna1 (MGP_CAROLIEiJ_G0023262) #29 Tprn (MGP_CAROLIEiJ_G0023261) #30 Tmem203 (MGP_CAROLIEiJ_G0023260) #31 Ndor1 (MGP_CAROLIEiJ_G0023259) #32 Rnf208 (MGP_CAROLIEiJ_G0023258) #33 Cysrt1 (MGP_CAROLIEiJ_G0023257) #34 Rnf224 (MGP_CAROLIEiJ_G0023256) #35 Slc34a3 (MGP_CAROLIEiJ_G0023255) #36 Tubb4b (MGP_CAROLIEiJ_G0023254) #37 Shrew mouse MODERN SPECIES 16 Ajm1 (MGP_PahariEiJ_G0024743) Phpt1 (MGP_PahariEiJ_G0024742) Mamdc4 (MGP_PahariEiJ_G0024741) Traf2 (MGP_PahariEiJ_G0024739) #8 Fbxw5 (MGP_PahariEiJ_G0024738) #9 C8g (MGP_PahariEiJ_G0024737) #11 Lcn12 (MGP_PahariEiJ_G0024736) Ptgds (MGP_PahariEiJ_G0024735) #13 Clic3 (MGP_PahariEiJ_G0024734) #16 Paxx (MGP_PahariEiJ_G0024733) #15 Abca2 (MGP_PahariEiJ_G0024732) #17 Fut7 (MGP_PahariEiJ_G0024731) #18 Npdc1 (MGP_PahariEiJ_G0024730) #19 Entpd2 (MGP_PahariEiJ_G0024729) #20 Sapcd2 (MGP_PahariEiJ_G0024728) #21 Uap1l1 (MGP_PahariEiJ_G0024727) #22 Dpp7 (MGP_PahariEiJ_G0024726) #24 Man1b1 (MGP_PahariEiJ_G0024725) #23 Grin1 (MGP_PahariEiJ_G0024724) #25 Lrrc26 (MGP_PahariEiJ_G0024723) #26 Tmem210 (MGP_PahariEiJ_G0024722) #27 Anapc2 (MGP_PahariEiJ_G0024721) #28 Ssna1 (MGP_PahariEiJ_G0024720) #29 Tprn (MGP_PahariEiJ_G0024719) #30 Tmem203 (MGP_PahariEiJ_G0024718) #31 Ndor1 (MGP_PahariEiJ_G0024717) #32 Rnf208 (MGP_PahariEiJ_G0024716) #33 Cysrt1 (MGP_PahariEiJ_G0024715) #34 Rnf224 (MGP_PahariEiJ_G0024714) #35 Slc34a3 (MGP_PahariEiJ_G0024713) #36 Tubb4b (MGP_PahariEiJ_G0024712) #37 Rat MODERN SPECIES 13 Tmem141 (ENSRNOG00000028254) Ccdc183 (ENSRNOG00000017044) Rabl6 (ENSRNOG00000016795) Ajm1 (ENSRNOG00000033863) Edf1 (ENSRNOG00000016272) #7 Traf2 (ENSRNOG00000006238) #8 Fbxw5 (ENSRNOG00000028674) #9 C8g (ENSRNOG00000028701) #11 Ptgds (ENSRNOG00000015550) #13 Paxx (ENSRNOG00000015294) #15 Clic3 (ENSRNOG00000015184) #16 Abca2 (ENSRNOG00000014268) #17 Fut7 (ENSRNOG00000014156) #18 Npdc1 (ENSRNOG00000013102) #20 Sapcd2 (ENSRNOG00000013069) #21 Uap1l1 (ENSRNOG00000012960) #22 Dpp7 (ENSRNOG00000012640) #24 Man1b1 (ENSRNOG00000012559) #23 Grin1 (ENSRNOG00000011726) #25 Lrrc26 (ENSRNOG00000011457) #26 Tmem210 (ENSRNOG00000040275) #27 Anapc2 (ENSRNOG00000011295) #28 Ssna1 (ENSRNOG00000011093) #29 Tprn (ENSRNOG00000010896) #30 Tmem203 (ENSRNOG00000010894) #31 Ndor1 (ENSRNOG00000010616) #32 Cysrt1 (ENSRNOG00000010600) #34 Rnf224 (ENSRNOG00000040284) #35 Slc34a3 (ENSRNOG00000010451) #36 Rnf208 (ENSRNOG00000010607) #33 Tubb4b (ENSRNOG00000010170) #37 Cricetidae ANCESTRAL SPECIES 12 ENSGT00940000162046 ENSGT00390000008519.lb #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Cricetinae ANCESTRAL SPECIES 1 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519.lb #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Golden Hamster MODERN SPECIES 771 Phpt1 (ENSMAUG00000016521) Mamdc4 (ENSMAUG00000018382) ENSMAUG00000013857 #7 Traf2 (ENSMAUG00000000898) #8 Fbxw5 (ENSMAUG00000016532) #9 C8g (ENSMAUG00000017627) #11 Lcn12 (ENSMAUG00000003344) Ptgds (ENSMAUG00000003427) #13 Paxx (ENSMAUG00000003458) #15 Clic3 (ENSMAUG00000013703) #16 Abca2 (ENSMAUG00000000733) #17 Fut7 (ENSMAUG00000020724) #18 Npdc1 (ENSMAUG00000001234) #19 Entpd2 (ENSMAUG00000013094) #20 Sapcd2 (ENSMAUG00000019171) #21 Uap1l1 (ENSMAUG00000015530) #22 Dpp7 (ENSMAUG00000010547) #24 Man1b1 (ENSMAUG00000014662) #23 Grin1 (ENSMAUG00000019825) #25 Lrrc26 (ENSMAUG00000015545) #26 Tmem210 (ENSMAUG00000014833) #27 Anapc2 (ENSMAUG00000011413) #28 Ssna1 (ENSMAUG00000015044) #29 Tprn (ENSMAUG00000002634) #30 Tmem203 (ENSMAUG00000009023) #31 Cysrt1 (ENSMAUG00000018797) #34 Rnf224 (ENSMAUG00000008755) #35 Slc34a3 (ENSMAUG00000001635) #36 Tubb4b (ENSMAUG00000004730) #37 Fam166a (ENSMAUG00000010869) Stpg3 (ENSMAUG00000019445) Chinese hamster chok1gshd MODERN SPECIES 188 Phpt1 (ENSCGRG00001009448) Mamdc4 (ENSCGRG00001011748) Edf1 (ENSCGRG00001010405) #7 Traf2 (ENSCGRG00001016324) #8 Fbxw5 (ENSCGRG00001006453) #9 C8g (ENSCGRG00001002546) #11 Lcn12 (ENSCGRG00001009091) Ptgds (ENSCGRG00001005190) #13 Paxx (ENSCGRG00001004092) #15 Clic3 (ENSCGRG00001016510) #16 Abca2 (ENSCGRG00001008128) #17 Fut7 (ENSCGRG00001005263) #18 Npdc1 (ENSCGRG00001017154) #19 Entpd2 (ENSCGRG00001016211) #20 Sapcd2 (ENSCGRG00001017804) #21 Uap1l1 (ENSCGRG00001011921) #22 Dpp7 (ENSCGRG00001009351) #24 Man1b1 (ENSCGRG00001012772) #23 Grin1 (ENSCGRG00001010223) #25 Lrrc26 (ENSCGRG00001013084) #26 Tmem210 (ENSCGRG00001012766) #27 Anapc2 (ENSCGRG00001019671) #28 Ssna1 (ENSCGRG00001012373) #29 Tprn (ENSCGRG00001012035) #30 Tmem203 (ENSCGRG00001007727) #31 NDOR1 (ENSCGRG00001008788) #32 Rnf208 (ENSCGRG00001007346) #33 Cysrt1 (ENSCGRG00001006292) #34 Rnf224 (ENSCGRG00001008988) #35 Slc34a3 (ENSCGRG00001014537) #36 Tubb4b (ENSCGRG00001012850) #37 Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00940000162046 ENSGT00390000008519.lb #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Northern American deer mouse MODERN SPECIES 17 Edf1 (ENSPEMG00000018336) #7 Traf2 (ENSPEMG00000011629) #8 Fbxw5 (ENSPEMG00000011944) #9 ENSPEMG00000028250 #10 C8g (ENSPEMG00000005092) #11 Lcn12 (ENSPEMG00000013508) Ptgds (ENSPEMG00000008581) #13 Paxx (ENSPEMG00000018798) #15 Clic3 (ENSPEMG00000010344) #16 ENSPEMG00000026866 #17 ENSPEMG00000018604 #17 Fut7 (ENSPEMG00000014626) #18 Npdc1 (ENSPEMG00000018080) #19 Entpd2 (ENSPEMG00000016585) #20 Sapcd2 (ENSPEMG00000010207) #21 Uap1l1 (ENSPEMG00000002939) #22 Dpp7 (ENSPEMG00000014332) #24 Man1b1 (ENSPEMG00000008520) #23 Grin1 (ENSPEMG00000012505) #25 Lrrc26 (ENSPEMG00000028885) #26 Tmem210 (ENSPEMG00000009158) #27 Anapc2 (ENSPEMG00000011204) #28 Ssna1 (ENSPEMG00000025496) #29 Tprn (ENSPEMG00000018046) #30 Tmem203 (ENSPEMG00000006262) #31 Ndor1 (ENSPEMG00000009089) #32 Rnf208 (ENSPEMG00000031408) #33 Cysrt1 (ENSPEMG00000030113) #34 Rnf224 (ENSPEMG00000005243) #35 Slc34a3 (ENSPEMG00000016827) #36 Tubb4b (ENSPEMG00000030881) #37 Prairie vole MODERN SPECIES 12 Mamdc4 (ENSMOCG00000013367) Edf1 (ENSMOCG00000007658) #7 ENSMOCG00000013973 Traf2 (ENSMOCG00000019498) #8 Fbxw5 (ENSMOCG00000017562) #9 C8g (ENSMOCG00000021565) #11 Lcn12 (ENSMOCG00000003650) Ptgds (ENSMOCG00000010316) #13 Paxx (ENSMOCG00000013243) #15 Clic3 (ENSMOCG00000015074) #16 Abca2 (ENSMOCG00000021438) #17 Fut7 (ENSMOCG00000017536) #18 Npdc1 (ENSMOCG00000008064) #19 Entpd2 (ENSMOCG00000010488) #20 Sapcd2 (ENSMOCG00000016720) #21 Uap1l1 (ENSMOCG00000020526) #22 Dpp7 (ENSMOCG00000022857) #24 Man1b1 (ENSMOCG00000022250) #23 Grin1 (ENSMOCG00000001739) #25 Lrrc26 (ENSMOCG00000000776) #26 Tmem210 (ENSMOCG00000022497) #27 Anapc2 (ENSMOCG00000018370) #28 Ssna1 (ENSMOCG00000000672) #29 Tprn (ENSMOCG00000002526) #30 Tmem203 (ENSMOCG00000002237) #31 Ndor1 (ENSMOCG00000014853) #32 Rnf208 (ENSMOCG00000017277) #33 Cysrt1 (ENSMOCG00000018383) #34 Rnf224 (ENSMOCG00000001015) #35 Slc34a3 (ENSMOCG00000020019) #36 Tubb4b (ENSMOCG00000001389) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1179 Phpt1 (ENSNGAG00000007744) Mamdc4 (ENSNGAG00000018162) Edf1 (ENSNGAG00000017082) #7 Traf2 (ENSNGAG00000020956) #8 Fbxw5 (ENSNGAG00000018210) #9 C8g (ENSNGAG00000002560) #11 Lcn12 (ENSNGAG00000018066) Ptgds (ENSNGAG00000017471) #13 Paxx (ENSNGAG00000016660) #15 Clic3 (ENSNGAG00000012949) #16 Abca2 (ENSNGAG00000019981) #17 Fut7 (ENSNGAG00000020762) #18 Npdc1 (ENSNGAG00000008893) #19 Entpd2 (ENSNGAG00000002496) #20 Sapcd2 (ENSNGAG00000019600) #21 Uap1l1 (ENSNGAG00000020472) #22 Dpp7 (ENSNGAG00000020456) #24 Lesser Egyptian jerboa MODERN SPECIES 53 Phpt1 (ENSJJAG00000021278) Mamdc4 (ENSJJAG00000010818) ENSJJAG00000022999 #7 Traf2 (ENSJJAG00000021847) #8 Fbxw5 (ENSJJAG00000021184) #9 C8g (ENSJJAG00000020577) #11 Lcn12 (ENSJJAG00000000327) Ptgds (ENSJJAG00000017263) #13 Paxx (ENSJJAG00000006997) #15 Clic3 (ENSJJAG00000022037) #16 Abca2 (ENSJJAG00000016080) #17 Fut7 (ENSJJAG00000019986) #18 Npdc1 (ENSJJAG00000008582) #19 Entpd2 (ENSJJAG00000019539) #20 Sapcd2 (ENSJJAG00000021677) #21 Uap1l1 (ENSJJAG00000011506) #22 Dpp7 (ENSJJAG00000023901) #24 Man1b1 (ENSJJAG00000009593) #23 Grin1 (ENSJJAG00000021930) #25 Lrrc26 (ENSJJAG00000022399) #26 Tmem210 (ENSJJAG00000022174) #27 Anapc2 (ENSJJAG00000020552) #28 Ssna1 (ENSJJAG00000015805) #29 Tprn (ENSJJAG00000018406) #30 Ndor1 (ENSJJAG00000023469) #32 Rnf208 (ENSJJAG00000003202) #33 Cysrt1 (ENSJJAG00000000597) #34 Rnf224 (ENSJJAG00000012529) #35 Slc34a3 (ENSJJAG00000009730) #36 Tubb4b (ENSJJAG00000021854) #37 Fam166a (ENSJJAG00000015910) Kangaroo rat MODERN SPECIES 437 Rabl6 (ENSDORG00000012727) Phpt1 (ENSDORG00000005100) Mamdc4 (ENSDORG00000005098) ENSDORG00000005097 #7 Traf2 (ENSDORG00000004160) #8 Fbxw5 (ENSDORG00000004161) #9 C8g (ENSDORG00000026220) #11 ENSDORG00000028372 Paxx (ENSDORG00000010003) #15 Clic3 (ENSDORG00000010004) #16 Abca2 (ENSDORG00000010005) #17 Fut7 (ENSDORG00000027166) #18 Npdc1 (ENSDORG00000025278) #19 Entpd2 (ENSDORG00000003428) #20 ENSDORG00000004965 #21 Uap1l1 (ENSDORG00000001214) #22 Dpp7 (ENSDORG00000001210) #24 Man1b1 (ENSDORG00000024703) #23 Grin1 (ENSDORG00000025069) #25 Tmem210 (ENSDORG00000009420) #27 Anapc2 (ENSDORG00000009421) #28 Ssna1 (ENSDORG00000024926) #29 Tmem203 (ENSDORG00000009424) #31 Ndor1 (ENSDORG00000009425) #32 ENSDORG00000024457 Cysrt1 (ENSDORG00000029637) #34 Rnf224 (ENSDORG00000024963) #35 Slc34a3 (ENSDORG00000009429) #36 Tubb4b (ENSDORG00000029897) #37 Fam166a (ENSDORG00000009433) Stpg3 (ENSDORG00000009435) Lagomorpha ANCESTRAL SPECIES 758 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 Pika MODERN SPECIES 4392 ENSOPRG00000015771 #22 DPP7 (ENSOPRG00000015792) #24 Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000153464.A.a #22 Hedgehog MODERN SPECIES 15453 UAP1L1 (ENSEEUG00000005423) #22 Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Suina ANCESTRAL SPECIES 47 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01050000244868.a.a.b.a.a ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Pig MODERN SPECIES 286 EDF1 (ENSSSCG00000038203) #7 TRAF2 (ENSSSCG00000005838) #8 ENSSSCG00000032001 #10 FBXW5 (ENSSSCG00000005839) #9 C8G (ENSSSCG00000005840) #11 ENSSSCG00000040164 PTGDS (ENSSSCG00000040080) ENSSSCG00000053158 PAXX (ENSSSCG00000038428) #15 CLIC3 (ENSSSCG00000037395) #16 ABCA2 (ENSSSCG00000039264) #17 FUT7 (ENSSSCG00000037554) #18 NPDC1 (ENSSSCG00000034566) #19 ENTPD2 (ENSSSCG00000032303) #20 SAPCD2 (ENSSSCG00000032279) #21 UAP1L1 (ENSSSCG00000040003) #22 ENSSSCG00000039830 #23 DPP7 (ENSSSCG00000033991) #24 ENSSSCG00000027526 #23 GRIN1 (ENSSSCG00000039834) #25 LRRC26 (ENSSSCG00000032509) #26 ANAPC2 (ENSSSCG00000032828) #28 SSNA1 (ENSSSCG00000040396) #29 ENSSSCG00000036027 #30 TMEM203 (ENSSSCG00000034562) #31 NDOR1 (ENSSSCG00000005859) #32 RNF208 (ENSSSCG00000005858) #33 CYSRT1 (ENSSSCG00000005857) #34 RNF224 (ENSSSCG00000005856) #35 SLC34A3 (ENSSSCG00000040105) #36 TUBB4B (ENSSSCG00000037046) #37 Chacoan peccary MODERN SPECIES 794 TRAF2 (ENSCWAG00000015060) #8 FBXW5 (ENSCWAG00000015332) #9 ENSCWAG00000015368 #10 C8G (ENSCWAG00000015413) #11 ENSCWAG00000015490 PTGDS (ENSCWAG00000015570) #13 PAXX (ENSCWAG00000015628) #15 CLIC3 (ENSCWAG00000015657) #16 ENSCWAG00000015716 #17 FUT7 (ENSCWAG00000015840) #18 NPDC1 (ENSCWAG00000015856) #19 ENTPD2 (ENSCWAG00000015883) #20 SAPCD2 (ENSCWAG00000015989) #21 UAP1L1 (ENSCWAG00000016046) #22 MAN1B1 (ENSCWAG00000016126) #23 DPP7 (ENSCWAG00000016154) #24 ENSCWAG00000016244 #25 ENSCWAG00000016334 #25 LRRC26 (ENSCWAG00000016371) #26 TMEM210 (ENSCWAG00000016398) #27 ANAPC2 (ENSCWAG00000016433) #28 SSNA1 (ENSCWAG00000016461) #29 ENSCWAG00000016496 #30 TMEM203 (ENSCWAG00000016507) #31 NDOR1 (ENSCWAG00000016522) #32 RNF208 (ENSCWAG00000016647) #33 CYSRT1 (ENSCWAG00000016658) #34 RNF224 (ENSCWAG00000016669) #35 SLC34A3 (ENSCWAG00000016682) #36 Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Cetacea ANCESTRAL SPECIES 9 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT00940000169457 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510.i #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Odontoceti ANCESTRAL SPECIES 8 ENSGT00390000002738.a.f ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510.i #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Odontoceti_a ANCESTRAL SPECIES 19 ENSGT00390000002738.a.f ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510.i #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 ENSGT00730000111343 Dolphin MODERN SPECIES 2650 ENSTTRG00000002072 ENSTTRG00000021357 #14 PAXX (ENSTTRG00000002075) #15 CLIC3 (ENSTTRG00000002077) #16 ABCA2 (ENSTTRG00000002078) #17 ENTPD2 (ENSTTRG00000002088) #20 SAPCD2 (ENSTTRG00000002090) #21 UAP1L1 (ENSTTRG00000002092) #22 DPP7 (ENSTTRG00000002095) #24 GRIN1 (ENSTTRG00000002098) #25 LRRC26 (ENSTTRG00000002102) #26 TMEM210 (ENSTTRG00000002104) #27 ANAPC2 (ENSTTRG00000002105) #28 SSNA1 (ENSTTRG00000002112) #29 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00390000002738.a.f ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510.i #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 ENSGT00730000111343 Monodontidae ANCESTRAL SPECIES 5 ENSGT00390000002738.a.f ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT00940000166200 #14 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510.i #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 ENSGT00730000111343 ENSGT00390000012665 Narwhal MODERN SPECIES 312 RABL6 (ENSMMNG00015019023) AJM1 (ENSMMNG00015019084) ENSMMNG00015019093 MAMDC4 (ENSMMNG00015019122) EDF1 (ENSMMNG00015019204) #7 TRAF2 (ENSMMNG00015019230) #8 FBXW5 (ENSMMNG00015019281) #9 C8G (ENSMMNG00015019320) #11 PTGDS (ENSMMNG00015019351) #13 PAXX (ENSMMNG00015019378) #15 CLIC3 (ENSMMNG00015019407) #16 FUT7 (ENSMMNG00015019751) #18 NPDC1 (ENSMMNG00015019790) #19 ENTPD2 (ENSMMNG00015019902) #20 SAPCD2 (ENSMMNG00015019948) #21 UAP1L1 (ENSMMNG00015019976) #22 MAN1B1 (ENSMMNG00015020010) #23 DPP7 (ENSMMNG00015020061) #24 GRIN1 (ENSMMNG00015020191) #25 LRRC26 (ENSMMNG00015020364) #26 ANAPC2 (ENSMMNG00015020394) #28 SSNA1 (ENSMMNG00015020461) #29 TPRN (ENSMMNG00015020480) #30 ENSMMNG00015020488 #31 NDOR1 (ENSMMNG00015020511) #32 RNF208 (ENSMMNG00015020573) #33 RNF224 (ENSMMNG00015020580) #35 ENSMMNG00015020595 #36 TUBB4B (ENSMMNG00015020624) #37 FAM166A (ENSMMNG00015020649) NELFB (ENSMMNG00015013996) Beluga whale MODERN SPECIES 19 CUNH9orf172 (ENSDLEG00000015531) ENSDLEG00000015526 MAMDC4 (ENSDLEG00000015426) EDF1 (ENSDLEG00000015396) #7 TRAF2 (ENSDLEG00000015358) #8 FBXW5 (ENSDLEG00000015343) #9 C8G (ENSDLEG00000015332) #11 PTGDS (ENSDLEG00000015309) #13 ENSDLEG00000015295 #14 PAXX (ENSDLEG00000015266) #15 ABCA2 (ENSDLEG00000014944) #17 FUT7 (ENSDLEG00000014892) #18 NPDC1 (ENSDLEG00000014877) #19 ENTPD2 (ENSDLEG00000014672) #20 SAPCD2 (ENSDLEG00000014642) #21 UAP1L1 (ENSDLEG00000014607) #22 MAN1B1 (ENSDLEG00000014568) #23 DPP7 (ENSDLEG00000014534) #24 GRIN1 (ENSDLEG00000014499) #25 ANAPC2 (ENSDLEG00000014473) #28 SSNA1 (ENSDLEG00000014448) #29 TPRN (ENSDLEG00000014441) #30 TMEM203 (ENSDLEG00000014439) #31 NDOR1 (ENSDLEG00000014392) #32 RNF208 (ENSDLEG00000014374) #33 RNF224 (ENSDLEG00000014360) #35 ENSDLEG00000014343 #36 TUBB4B (ENSDLEG00000014334) #37 FAM166A (ENSDLEG00000014318) NELFB (ENSDLEG00000014292) TOR4A (ENSDLEG00000014280) Vaquita MODERN SPECIES 17 TMEM141 (ENSPSNG00000002634) ENSPSNG00000002607 ENSPSNG00000002512 PHPT1 (ENSPSNG00000002382) EDF1 (ENSPSNG00000002285) #7 TRAF2 (ENSPSNG00000002244) #8 FBXW5 (ENSPSNG00000002217) #9 ENSPSNG00000002179 #11 PTGDS (ENSPSNG00000002147) #13 PAXX (ENSPSNG00000002121) #15 ABCA2 (ENSPSNG00000001646) #17 FUT7 (ENSPSNG00000001491) #18 NPDC1 (ENSPSNG00000001472) #19 ENTPD2 (ENSPSNG00000001445) #20 SAPCD2 (ENSPSNG00000001421) #21 UAP1L1 (ENSPSNG00000001388) #22 ENSPSNG00000001359 #23 DPP7 (ENSPSNG00000001337) #24 GRIN1 (ENSPSNG00000000703) #25 LRRC26 (ENSPSNG00000000354) #26 TMEM210 (ENSPSNG00000000329) #27 ANAPC2 (ENSPSNG00000000278) #28 SSNA1 (ENSPSNG00000000224) #29 ENSPSNG00000000175 #31 NDOR1 (ENSPSNG00000000131) #32 RNF208 (ENSPSNG00000000079) #33 RNF224 (ENSPSNG00000000071) #35 ENSPSNG00000005867 ##37 ENSPSNG00000005831 ##37 FAM166A (ENSPSNG00000005807) NELFB (ENSPSNG00000005776) Sperm whale MODERN SPECIES 4 ENSPCTG00005009085 LCN8 (ENSPCTG00005008995) ENSPCTG00005008947 ENSPCTG00005008909 ENSPCTG00005008876 CCDC183 (ENSPCTG00005008792) RABL6 (ENSPCTG00005008721) AJM1 (ENSPCTG00005008687) PHPT1 (ENSPCTG00005008655) MAMDC4 (ENSPCTG00005008346) FBXW5 (ENSPCTG00005008288) #9 TRAF2 (ENSPCTG00005008255) #8 LCNL1 (ENSPCTG00005008230) #14 PTGDS (ENSPCTG00005008209) #13 SAPCD2 (ENSPCTG00005008182) #21 UAP1L1 (ENSPCTG00005008156) #22 ENSPCTG00005008108 #23 DPP7 (ENSPCTG00005008071) #24 ENSPCTG00005008034 #23 ENSPCTG00005008020 GRIN1 (ENSPCTG00005007612) #25 LRRC26 (ENSPCTG00005007520) #26 TMEM210 (ENSPCTG00005007504) #27 ANAPC2 (ENSPCTG00005007477) #28 SSNA1 (ENSPCTG00005007440) #29 ENSPCTG00005007417 #30 TMEM203 (ENSPCTG00005007410) #31 NDOR1 (ENSPCTG00005007372) #32 RNF208 (ENSPCTG00005007323) #33 CYSRT1 (ENSPCTG00005007306) #34 RNF224 (ENSPCTG00005007288) #35 Blue whale MODERN SPECIES 17 MAMDC4 (ENSBMSG00010006817) EDF1 (ENSBMSG00010006887) #7 TRAF2 (ENSBMSG00010006905) #8 FBXW5 (ENSBMSG00010006925) #9 ENSBMSG00010006946 ENSBMSG00010006972 PTGDS (ENSBMSG00010006983) #13 PAXX (ENSBMSG00010007022) #15 CLIC3 (ENSBMSG00010007038) #16 ENSBMSG00010007062 #17 ENSBMSG00010007094 #17 FUT7 (ENSBMSG00010007113) #18 NPDC1 (ENSBMSG00010007128) #19 ENTPD2 (ENSBMSG00010007144) #20 SAPCD2 (ENSBMSG00010007159) #21 UAP1L1 (ENSBMSG00010007180) #22 MAN1B1 (ENSBMSG00010007207) #23 DPP7 (ENSBMSG00010007230) #24 ENSBMSG00010007240 GRIN1 (ENSBMSG00010007304) #25 TMEM210 (ENSBMSG00010007400) #27 ANAPC2 (ENSBMSG00010007415) #28 SSNA1 (ENSBMSG00010007431) #29 TPRN (ENSBMSG00010003782) #30 ENSBMSG00010003797 #31 NDOR1 (ENSBMSG00010003823) #32 RNF208 (ENSBMSG00010003851) #33 CYSRT1 (ENSBMSG00010003867) #34 RNF224 (ENSBMSG00010003878) #35 SLC34A3 (ENSBMSG00010003897) #36 TUBB4B (ENSBMSG00010003932) #37 Pecora ANCESTRAL SPECIES 5 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Percora_a ANCESTRAL SPECIES 27 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Bovidae ANCESTRAL SPECIES 5 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.g #23 ENSGT00940000159838 #24 ENSGT00940000155422.h #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Bovinae ANCESTRAL SPECIES 4 ENSGT00390000002738.a ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00940000169457 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.g #23 ENSGT00940000159838 #24 ENSGT00940000155422.h #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Bos ANCESTRAL SPECIES 5 ENSGT00390000002738.a ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00940000169457 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.g #23 ENSGT00940000159838 #24 ENSGT00940000155422.h.a #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Bos_a ANCESTRAL SPECIES 23 ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00940000169457 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.h.b #23 ENSGT00940000159838 #24 ENSGT00940000155422.h.a #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Domestic yak MODERN SPECIES 28 RABL6 (ENSBGRG00000006950) AJM1 (ENSBGRG00000007013) PHPT1 (ENSBGRG00000007028) EDF1 (ENSBGRG00000007569) #7 TRAF2 (ENSBGRG00000007742) #8 FBXW5 (ENSBGRG00000007884) #9 ENSBGRG00000007955 LCN12 (ENSBGRG00000008098) ENSBGRG00000008193 #13 ENSBGRG00000008335 PAXX (ENSBGRG00000008372) #15 FUT7 (ENSBGRG00000008735) #18 NPDC1 (ENSBGRG00000008757) #19 ENTPD2 (ENSBGRG00000008803) #20 SAPCD2 (ENSBGRG00000009015) #21 UAP1L1 (ENSBGRG00000009106) #22 ENSBGRG00000009244 #23 DPP7 (ENSBGRG00000009515) #24 ENSBGRG00000009709 #23 GRIN1 (ENSBGRG00000009802) #25 LRRC26 (ENSBGRG00000010173) #26 TMEM210 (ENSBGRG00000010218) #27 ANAPC2 (ENSBGRG00000010293) #28 SSNA1 (ENSBGRG00000010372) #29 TPRN (ENSBGRG00000010421) #30 TMEM203 (ENSBGRG00000010550) #31 NDOR1 (ENSBGRG00000010563) #32 CYSRT1 (ENSBGRG00000010876) #34 ENSBGRG00000010906 #35 SLC34A3 (ENSBGRG00000010934) #36 ENSBGRG00000011047 ##37 Bos_b ANCESTRAL SPECIES 16 ENSGT00390000016543 ENSGT00390000002738.a ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00940000169457 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.g #23 ENSGT00940000159838 #24 ENSGT00940000155422.h.a #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Hybrid Bos Indicus MODERN SPECIES 2 AJM1 (ENSBIXG00005005128) PHPT1 (ENSBIXG00005029030) EDF1 (ENSBIXG00005005090) #7 TRAF2 (ENSBIXG00005005083) #8 FBXW5 (ENSBIXG00005005055) #9 ENSBIXG00005005030 ENSBIXG00005028821 PTGDS (ENSBIXG00005028691) #13 ENSBIXG00005028678 PAXX (ENSBIXG00005028665) #15 CLIC3 (ENSBIXG00005002415) #16 FUT7 (ENSBIXG00005006621) #18 NPDC1 (ENSBIXG00005027511) #19 ENTPD2 (ENSBIXG00005027498) #20 ENSBIXG00005027468 #21 UAP1L1 (ENSBIXG00005004725) #22 ENSBIXG00005027411 #23 DPP7 (ENSBIXG00005027398) #24 ENSBIXG00005027383 #23 GRIN1 (ENSBIXG00005027297) #25 LRRC26 (ENSBIXG00005027183) #26 TMEM210 (ENSBIXG00005027173) #27 ANAPC2 (ENSBIXG00005027150) #28 SSNA1 (ENSBIXG00005004655) #29 ENSBIXG00005027093 #30 TMEM203 (ENSBIXG00005006939) #31 NDOR1 (ENSBIXG00005004640) #32 RNF208 (ENSBIXG00005026984) #33 SLC34A3 (ENSBIXG00005026970) #36 TUBB4B (ENSBIXG00005026939) #37 FAM166A (ENSBIXG00005026905) Cow MODERN SPECIES 2 PHPT1 (ENSBTAG00000050722) EDF1 (ENSBTAG00000030302) #7 TRAF2 (ENSBTAG00000010497) #8 FBXW5 (ENSBTAG00000010515) #9 C8G (ENSBTAG00000052909) LCN12 (ENSBTAG00000039531) PTGDS (ENSBTAG00000015074) #13 ENSBTAG00000030296 ENSBTAG00000049497 CLIC3 (ENSBTAG00000015085) #16 PAXX (ENSBTAG00000015081) #15 FUT7 (ENSBTAG00000046516) #18 NPDC1 (ENSBTAG00000046140) #19 ENTPD2 (ENSBTAG00000048125) #20 SAPCD2 (ENSBTAG00000047807) #21 UAP1L1 (ENSBTAG00000048054) #22 MAN1B1 (ENSBTAG00000046775) #23 DPP7 (ENSBTAG00000047958) #24 ENSBTAG00000053827 #23 GRIN1 (ENSBTAG00000047202) #25 ENSBTAG00000049029 LRRC26 (ENSBTAG00000045734) #26 TMEM210 (ENSBTAG00000047964) #27 ANAPC2 (ENSBTAG00000046223) #28 SSNA1 (ENSBTAG00000046415) #29 TPRN (ENSBTAG00000047715) #30 TMEM203 (ENSBTAG00000053425) #31 NDOR1 (ENSBTAG00000047061) #32 RNF208 (ENSBTAG00000047357) #33 CYSRT1 (ENSBTAG00000045711) #34 RNF224 (ENSBTAG00000046418) #35 Caprinae ANCESTRAL SPECIES 27 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.g #23 ENSGT00940000159838 #24 ENSGT00940000155422.h #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Goat MODERN SPECIES 2 ABCA2 (ENSCHIG00000024025) #17 FUT7 (ENSCHIG00000010111) #18 NPDC1 (ENSCHIG00000020198) #19 ENTPD2 (ENSCHIG00000010567) #20 SAPCD2 (ENSCHIG00000021112) #21 UAP1L1 (ENSCHIG00000012172) #22 ENSCHIG00000026566 #23 DPP7 (ENSCHIG00000018221) #24 ENSCHIG00000016373 #23 GRIN1 (ENSCHIG00000016229) #25 LRRC26 (ENSCHIG00000013005) #26 TMEM210 (ENSCHIG00000020970) #27 ANAPC2 (ENSCHIG00000004602) #28 SSNA1 (ENSCHIG00000016829) #29 TPRN (ENSCHIG00000024492) #30 TMEM203 (ENSCHIG00000008657) #31 NDOR1 (ENSCHIG00000009768) #32 RNF208 (ENSCHIG00000016054) #33 CYSRT1 (ENSCHIG00000025664) #34 RNF224 (ENSCHIG00000008161) #35 SLC34A3 (ENSCHIG00000009232) #36 Rambouillet Sheep MODERN SPECIES 19 PHPT1 (ENSOARG00020000451) EDF1 (ENSOARG00020000401) #7 TRAF2 (ENSOARG00020000385) #8 FBXW5 (ENSOARG00020000375) #9 C8G (ENSOARG00020000344) #11 ENSOARG00020000295 PTGDS (ENSOARG00020000264) #13 ENSOARG00020000226 PAXX (ENSOARG00020000208) #15 CLIC3 (ENSOARG00020025212) #16 ENSOARG00020025152 #17 FUT7 (ENSOARG00020025139) #18 NPDC1 (ENSOARG00020025118) #19 ENTPD2 (ENSOARG00020025101) #20 SAPCD2 (ENSOARG00020025078) #21 UAP1L1 (ENSOARG00020025053) #22 ENSOARG00020025034 #23 DPP7 (ENSOARG00020024989) #24 ENSOARG00020024966 #23 GRIN1 (ENSOARG00020023258) #25 LRRC26 (ENSOARG00020023178) #26 TMEM210 (ENSOARG00020023135) #27 ANAPC2 (ENSOARG00020023059) #28 SSNA1 (ENSOARG00020023026) #29 TMEM203 (ENSOARG00020023013) #31 NDOR1 (ENSOARG00020022952) #32 RNF208 (ENSOARG00020022906) #33 SLC34A3 (ENSOARG00020022823) #36 TUBB4B (ENSOARG00020022799) #37 FAM166A (ENSOARG00020022733) STPG3 (ENSOARG00020022596) Siberian musk deer MODERN SPECIES 1177 PTGDS (ENSMMSG00000010740) #13 ENSMMSG00000010795 PAXX (ENSMMSG00000010824) #15 ENSMMSG00000010885 #16 ENSMMSG00000010929 #17 FUT7 (ENSMMSG00000010967) #18 NPDC1 (ENSMMSG00000010986) #19 ENTPD2 (ENSMMSG00000011022) #20 SAPCD2 (ENSMMSG00000011052) #21 UAP1L1 (ENSMMSG00000011082) #22 MAN1B1 (ENSMMSG00000011119) #23 DPP7 (ENSMMSG00000011172) #24 LRRC26 (ENSMMSG00000011365) #26 ANAPC2 (ENSMMSG00000011398) #28 SSNA1 (ENSMMSG00000011460) #29 TPRN (ENSMMSG00000011485) #30 TMEM203 (ENSMMSG00000011512) #31 NDOR1 (ENSMMSG00000011552) #32 RNF208 (ENSMMSG00000012074) #33 CYSRT1 (ENSMMSG00000012085) #34 RNF224 (ENSMMSG00000012095) #35 SLC34A3 (ENSMMSG00000012120) #36 TUBB4B (ENSMMSG00000012157) #37 FAM166A (ENSMMSG00000012227) STPG3 (ENSMMSG00000012254) Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 2 ENSCHYG00000021520 ENSCHYG00000020912 #7 ENSCHYG00000020665 #8 ENSCHYG00000020519 #9 ENSCHYG00000020201 ENSCHYG00000020088 ENSCHYG00000020041 #13 ENSCHYG00000019947 #15 ENSCHYG00000019872 #16 ENSCHYG00000019701 #17 ENSCHYG00000019619 #17 ENSCHYG00000019549 #17 ENSCHYG00000019369 #20 ENSCHYG00000019336 ENSCHYG00000019109 #21 ENSCHYG00000019007 #22 ENSCHYG00000018903 #23 ENSCHYG00000016970 #25 ENSCHYG00000016909 #26 ENSCHYG00000016865 #27 ENSCHYG00000016744 #28 TUBB4B (ENSCHYG00000016588) #37 ENSCHYG00000016490 ENSCHYG00000016401 ENSCHYG00000016350 ENSCHYG00000016322 ENSCHYG00000016287 ENSCHYG00000016086 ENSCHYG00000015910 ENSCHYG00000015858 ENSCHYG00000015756 ##20 Yarkand deer MODERN SPECIES 2 ENSCHYG00000018699 ENSCHYG00000018311 ENSCHYG00000018151 ENSCHYG00000018107 ENSCHYG00000018072 ENSCHYG00000017539 #7 ENSCHYG00000017439 #8 ENSCHYG00000017343 #9 C8G (ENSCHYG00000017265) #11 ENSCHYG00000017133 ENSCHYG00000017000 #13 ENSCHYG00000016923 #15 ENSCHYG00000016848 #16 ENSCHYG00000016157 #20 ENSCHYG00000016005 #21 ENSCHYG00000015892 #22 ENSCHYG00000015656 #23 ENSCHYG00000015336 #25 ENSCHYG00000015280 #26 ENSCHYG00000015251 #27 ENSCHYG00000015152 #28 ENSCHYG00000015091 #37 ENSCHYG00000014973 ENSCHYG00000014805 ENSCHYG00000014381 ENSCHYG00000014334 ENSCHYG00000014308 ENSCHYG00000014124 ENSCHYG00000014017 ENSCHYG00000013939 ##20 ENSCHYG00000013672 Camelidae ANCESTRAL SPECIES 65 ENSGT00940000153116.D ENSGT00940000163544 ENSGT00390000016002 ENSGT00390000016543 ENSGT00390000002738.a ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Arabian camel MODERN SPECIES 30 TMEM141 (ENSCDRG00005022285) CCDC183 (ENSCDRG00005022283) RABL6 (ENSCDRG00005022282) AJM1 (ENSCDRG00005022281) PHPT1 (ENSCDRG00005022280) EDF1 (ENSCDRG00005022278) #7 TRAF2 (ENSCDRG00005022277) #8 C8G (ENSCDRG00005022275) #11 ENSCDRG00005022274 #13 PAXX (ENSCDRG00005022271) #15 CLIC3 (ENSCDRG00005022270) #16 FUT7 (ENSCDRG00005022268) #18 NPDC1 (ENSCDRG00005022267) #19 ENTPD2 (ENSCDRG00005022266) #20 SAPCD2 (ENSCDRG00005022265) #21 UAP1L1 (ENSCDRG00005022264) #22 ENSCDRG00005022263 #17 DPP7 (ENSCDRG00005022261) #24 ENSCDRG00005022260 #23 ENSCDRG00005022259 #23 GRIN1 (ENSCDRG00005022254) #25 ENSCDRG00005022252 #26 TMEM210 (ENSCDRG00005022250) #27 ANAPC2 (ENSCDRG00005022249) #28 SSNA1 (ENSCDRG00005022248) #29 ENSCDRG00005022247 #30 TMEM203 (ENSCDRG00005022246) #31 ENSCDRG00005022245 #32 ENSCDRG00005022244 RNF208 (ENSCDRG00005022243) #33 CYSRT1 (ENSCDRG00005022242) #34 Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00940000154394.b.a.b #37 ENSGT00950000183177.a.a.a.b #36 ENSGT00510000050587 #35 ENSGT00390000003233 #34 ENSGT00680000100126 #33 ENSGT00730000114714 ENSGT00930000151050 #32 ENSGT00510000049510 #31 ENSGT00530000064035.b #30 ENSGT00390000012318 #29 ENSGT00390000016127 #28 ENSGT00390000008939 #27 ENSGT00940000162780 #26 ENSGT00940000158016.d #25 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT01100000263542.B.b #20 ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT01050000244868.a.a.b.a.a ENSGT01100000263580 #13 ENSGT01050000244868.b.b ENSGT00440000034309 #11 ENSGT00990000203858 #10 ENSGT00730000111276 #9 ENSGT00940000156621 #8 Carnivora ANCESTRAL SPECIES 18 ENSGT00940000154394.b.a.b #37 ENSGT00950000183177.a.a.a.b #36 ENSGT00510000050587 #35 ENSGT00390000003233 #34 ENSGT00680000100126 #33 ENSGT00730000114714 ENSGT00930000151050 #32 ENSGT00510000049510 #31 ENSGT00530000064035.b #30 ENSGT00390000012318 #29 ENSGT00390000016127 #28 ENSGT00390000008939 #27 ENSGT00940000162780 #26 ENSGT00940000158016.d #25 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT01100000263542.B.b #20 ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT01050000244868.a.a.b.a.a ENSGT01100000263580 #13 ENSGT01050000244868.b.b ENSGT00440000034309 #11 ENSGT00990000203858 #10 ENSGT00730000111276 #9 ENSGT00940000156621 #8 Felidae ANCESTRAL SPECIES 16 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Panthera ANCESTRAL SPECIES 55 ENSGT00730000111343 ENSGT00940000154394.b.a.b #37 ENSGT00950000183177.a.a.a.b #36 ENSGT00510000050587 #35 ENSGT00390000003233 #34 ENSGT00680000100126 #33 ENSGT00730000114714 ENSGT00930000151050 #32 ENSGT00510000049510 #31 ENSGT00530000064035.b #30 ENSGT00390000012318 #29 ENSGT00390000016127 #28 ENSGT00390000008939 #27 ENSGT00940000162780 #26 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 Panthera_a ANCESTRAL SPECIES 10 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 ENSGT00730000111343 lion MODERN SPECIES 204 PHPT1 (ENSPLOG00000017259) EDF1 (ENSPLOG00000017929) #7 TRAF2 (ENSPLOG00000018020) #8 FBXW5 (ENSPLOG00000018088) #9 C8G (ENSPLOG00000018124) #11 LCN12 (ENSPLOG00000018194) PTGDS (ENSPLOG00000018248) #13 PAXX (ENSPLOG00000018387) #15 CLIC3 (ENSPLOG00000018419) #16 ENSPLOG00000018480 #17 ENSPLOG00000018508 #17 FUT7 (ENSPLOG00000018564) #18 NPDC1 (ENSPLOG00000018593) #19 ENTPD2 (ENSPLOG00000018686) #20 SAPCD2 (ENSPLOG00000018833) #21 UAP1L1 (ENSPLOG00000018898) #22 MAN1B1 (ENSPLOG00000018970) #23 LRRC26 (ENSPLOG00000019310) #26 TMEM210 (ENSPLOG00000019339) #27 ANAPC2 (ENSPLOG00000019390) #28 SSNA1 (ENSPLOG00000019532) #29 TPRN (ENSPLOG00000019575) #30 TMEM203 (ENSPLOG00000019589) #31 NDOR1 (ENSPLOG00000019642) #32 ENSPLOG00000019981 RNF208 (ENSPLOG00000019999) #33 CYSRT1 (ENSPLOG00000020009) #34 RNF224 (ENSPLOG00000020021) #35 SLC34A3 (ENSPLOG00000020050) #36 TUBB4B (ENSPLOG00000020120) #37 FAM166A (ENSPLOG00000020170) leopard MODERN SPECIES 185 AJM1 (ENSPPRG00000012136) PHPT1 (ENSPPRG00000006500) EDF1 (ENSPPRG00000006727) #7 TRAF2 (ENSPPRG00000006753) #8 FBXW5 (ENSPPRG00000006770) #9 ENSPPRG00000006789 #10 C8G (ENSPPRG00000006812) #11 PTGDS (ENSPPRG00000006844) #13 LCNL1 (ENSPPRG00000006855) PAXX (ENSPPRG00000006865) #15 CLIC3 (ENSPPRG00000006876) #16 FUT7 (ENSPPRG00000007382) #18 NPDC1 (ENSPPRG00000007396) #19 ENTPD2 (ENSPPRG00000007423) #20 SAPCD2 (ENSPPRG00000007437) #21 UAP1L1 (ENSPPRG00000007491) #22 Cat MODERN SPECIES 244 PHPT1 (ENSFCAG00000022658) MAMDC4 (ENSFCAG00000025055) EDF1 (ENSFCAG00000000388) #7 TRAF2 (ENSFCAG00000000389) #8 FBXW5 (ENSFCAG00000000391) #9 C8G (ENSFCAG00000000392) #11 ENSFCAG00000045771 LCNL1 (ENSFCAG00000027915) PAXX (ENSFCAG00000000394) #15 CLIC3 (ENSFCAG00000000395) #16 ENSFCAG00000049271 #17 FUT7 (ENSFCAG00000044182) #18 NPDC1 (ENSFCAG00000000398) #19 ENTPD2 (ENSFCAG00000000399) #20 SAPCD2 (ENSFCAG00000010490) #21 UAP1L1 (ENSFCAG00000000401) #22 ENSFCAG00000038731 #23 DPP7 (ENSFCAG00000008256) #24 ENSFCAG00000042440 #23 GRIN1 (ENSFCAG00000010251) #25 LRRC26 (ENSFCAG00000037371) #26 ANAPC2 (ENSFCAG00000010255) #28 SSNA1 (ENSFCAG00000026913) #29 TPRN (ENSFCAG00000031169) #30 TMEM203 (ENSFCAG00000045552) #31 NDOR1 (ENSFCAG00000028006) #32 FAM166A (ENSFCAG00000010270) ENSFCAG00000049930 CYSRT1 (ENSFCAG00000010266) #34 SLC34A3 (ENSFCAG00000022972) #36 RNF224 (ENSFCAG00000042344) #35 Caniformia DUPLICATION Caniformia DUPLICATION Caniformia ANCESTRAL SPECIES 75 ENSGT00390000008072 #21 ENSGT00940000153464.A.a.g.a #22 Canidae ANCESTRAL SPECIES 2 ENSGT00390000002738.a ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a.g.a #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Canis_lupus ANCESTRAL SPECIES 3 ENSGT00390000002738.a ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a.g.a #22 ENSGT00940000155422.p #23 ENSGT00940000159838 #24 ENSGT00940000155422.o #23 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Dingo MODERN SPECIES 327 PHPT1 (ENSCAFG00020002736) EDF1 (ENSCAFG00020002800) #7 TRAF2 (ENSCAFG00020002801) #8 FBXW5 (ENSCAFG00020002809) #9 ENSCAFG00020002821 #10 C8G (ENSCAFG00020002826) #11 LCN12 (ENSCAFG00020002838) PTGDS (ENSCAFG00020002853) #13 ENSCAFG00020002860 PAXX (ENSCAFG00020002865) #15 CLIC3 (ENSCAFG00020002871) #16 FUT7 (ENSCAFG00020002975) #18 NPDC1 (ENSCAFG00020002980) #19 ENTPD2 (ENSCAFG00020002995) #20 SAPCD2 (ENSCAFG00020003000) #21 ENSCAFG00020003008 #22 ENSCAFG00020003019 #23 DPP7 (ENSCAFG00020003061) #24 ENSCAFG00020003087 #23 ENSCAFG00020003092 #22 ENSCAFG00020003094 #25 LRRC26 (ENSCAFG00020003097) #26 ANAPC2 (ENSCAFG00020003103) #28 SSNA1 (ENSCAFG00020003106) #29 ENSCAFG00020003108 #30 TMEM203 (ENSCAFG00020003112) #31 NDOR1 (ENSCAFG00020003114) #32 RNF208 (ENSCAFG00020003120) #33 CYSRT1 (ENSCAFG00020003125) #34 RNF224 (ENSCAFG00020003128) #35 SLC34A3 (ENSCAFG00020003131) #36 Dog MODERN SPECIES 37 PHPT1 (ENSCAFG00845005276) EDF1 (ENSCAFG00845005198) #7 TRAF2 (ENSCAFG00845005186) #8 ENSCAFG00845005180 #10 FBXW5 (ENSCAFG00845005172) #9 C8G (ENSCAFG00845005165) #11 LCN12 (ENSCAFG00845005154) PTGDS (ENSCAFG00845005146) #13 ENSCAFG00845005131 PAXX (ENSCAFG00845005121) #15 CLIC3 (ENSCAFG00845025553) #16 FUT7 (ENSCAFG00845025345) #18 NPDC1 (ENSCAFG00845025281) #19 ENTPD2 (ENSCAFG00845025213) #20 SAPCD2 (ENSCAFG00845025161) #21 ENSCAFG00845025076 #22 ENSCAFG00845024994 #23 ENSCAFG00845024843 #24 ENSCAFG00845024757 #23 ENSCAFG00845024688 #22 ENSCAFG00845024533 #26 ANAPC2 (ENSCAFG00845024357) #28 SSNA1 (ENSCAFG00845024303) #29 ANAPC2 (ENSCAFG00845024228) #30 TMEM203 (ENSCAFG00845024091) #31 NDOR1 (ENSCAFG00845023868) #32 ENSCAFG00845023809 RNF208 (ENSCAFG00845023785) #33 CYSRT1 (ENSCAFG00845023754) #34 RNF224 (ENSCAFG00845023716) #35 SLC34A3 (ENSCAFG00845023641) #36 Caniformia ANCESTRAL SPECIES 16 ENSGT00730000111343 ENSGT00940000154394.b.a.b #37 ENSGT00950000183177.a.a.a.b #36 ENSGT00510000050587 #35 ENSGT00390000003233 #34 ENSGT00680000100126 #33 ENSGT00730000114714 ENSGT00930000151050 #32 ENSGT00510000049510 #31 ENSGT00530000064035.b #30 ENSGT00390000012318 #29 ENSGT00390000016127 #28 ENSGT00390000008939 #27 ENSGT00940000162780 #26 ENSGT00940000158016.d #25 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000153464.A.a.h #22 ENSGT01100000263542.B.b #20 ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT01050000244868.a.a.b.a.a ENSGT01100000263580 #13 ENSGT01050000244868.b.b ENSGT00440000034309 #11 ENSGT00990000203858 #10 ENSGT00730000111276 #9 Canidae ANCESTRAL SPECIES 2 ENSGT00730000111343 ENSGT00940000154394.b.a.b #37 ENSGT00950000183177.a.a.a.b #36 ENSGT00510000050587 #35 ENSGT00390000003233 #34 ENSGT00680000100126 #33 ENSGT00730000114714 ENSGT00930000151050 #32 ENSGT00510000049510 #31 ENSGT00530000064035.b #30 ENSGT00390000012318 #29 ENSGT00390000016127 #28 ENSGT00390000008939 #27 ENSGT00940000162780 #26 ENSGT00940000158016.d #25 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000153464.A.a.g.a #22 ENSGT00390000008072 #21 ENSGT01100000263542.B.b #20 ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT01050000244868.a.a.b.a.a ENSGT01100000263580 #13 ENSGT01050000244868.b.b ENSGT00440000034309 #11 ENSGT00990000203858 #10 ENSGT00730000111276 #9 Canis_lupus ANCESTRAL SPECIES 3 ENSGT00390000009524 ENSGT00730000111343 ENSGT00940000154394.b.a.b #37 ENSGT00950000183177.a.a.a.b #36 ENSGT00510000050587 #35 ENSGT00390000003233 #34 ENSGT00680000100126 #33 ENSGT00730000114714 ENSGT00930000151050 #32 ENSGT00510000049510 #31 ENSGT00530000064035.b #30 ENSGT00390000012318 #29 ENSGT00390000016127 #28 ENSGT00940000162780 #26 ENSGT00940000158016.d #25 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000155422.o #23 ENSGT00940000159838 #24 ENSGT00940000155422.p #23 ENSGT00940000153464.A.a.g.a #22 ENSGT00390000008072 #21 ENSGT01100000263542.B.b #20 ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT01050000244868.a.a.b.a.a ENSGT01100000263580 #13 ENSGT01050000244868.b.b ENSGT00440000034309 #11 ENSGT00990000203858 #10 Dingo MODERN SPECIES 327 NELFB (ENSCAFG00020003154) STPG3 (ENSCAFG00020003150) FAM166A (ENSCAFG00020003143) TUBB4B (ENSCAFG00020003141) #37 SLC34A3 (ENSCAFG00020003131) #36 RNF224 (ENSCAFG00020003128) #35 CYSRT1 (ENSCAFG00020003125) #34 RNF208 (ENSCAFG00020003120) #33 NDOR1 (ENSCAFG00020003114) #32 TMEM203 (ENSCAFG00020003112) #31 ENSCAFG00020003108 #30 SSNA1 (ENSCAFG00020003106) #29 ANAPC2 (ENSCAFG00020003103) #28 LRRC26 (ENSCAFG00020003097) #26 ENSCAFG00020003094 #25 ENSCAFG00020003092 #22 ENSCAFG00020003087 #23 DPP7 (ENSCAFG00020003061) #24 ENSCAFG00020003019 #23 ENSCAFG00020003008 #22 SAPCD2 (ENSCAFG00020003000) #21 ENTPD2 (ENSCAFG00020002995) #20 NPDC1 (ENSCAFG00020002980) #19 FUT7 (ENSCAFG00020002975) #18 CLIC3 (ENSCAFG00020002871) #16 PAXX (ENSCAFG00020002865) #15 ENSCAFG00020002860 PTGDS (ENSCAFG00020002853) #13 LCN12 (ENSCAFG00020002838) C8G (ENSCAFG00020002826) #11 ENSCAFG00020002821 #10 Dog MODERN SPECIES 37 NRARP (ENSCAFG00845023292) STPG3 (ENSCAFG00845023332) TUBB4B (ENSCAFG00845023509) #37 FAM166A (ENSCAFG00845023580) SLC34A3 (ENSCAFG00845023641) #36 RNF224 (ENSCAFG00845023716) #35 CYSRT1 (ENSCAFG00845023754) #34 RNF208 (ENSCAFG00845023785) #33 ENSCAFG00845023809 NDOR1 (ENSCAFG00845023868) #32 TMEM203 (ENSCAFG00845024091) #31 ANAPC2 (ENSCAFG00845024228) #30 SSNA1 (ENSCAFG00845024303) #29 ANAPC2 (ENSCAFG00845024357) #28 ENSCAFG00845024533 #26 ENSCAFG00845024688 #22 ENSCAFG00845024757 #23 ENSCAFG00845024843 #24 ENSCAFG00845024994 #23 ENSCAFG00845025076 #22 SAPCD2 (ENSCAFG00845025161) #21 ENTPD2 (ENSCAFG00845025213) #20 NPDC1 (ENSCAFG00845025281) #19 FUT7 (ENSCAFG00845025345) #18 CLIC3 (ENSCAFG00845025553) #16 PAXX (ENSCAFG00845005121) #15 ENSCAFG00845005131 PTGDS (ENSCAFG00845005146) #13 LCN12 (ENSCAFG00845005154) C8G (ENSCAFG00845005165) #11 FBXW5 (ENSCAFG00845005172) #9 Red fox MODERN SPECIES 260 STPG3 (ENSVVUG00000029407) FAM166A (ENSVVUG00000029409) TUBB4B (ENSVVUG00000029411) #37 SLC34A3 (ENSVVUG00000029420) #36 RNF224 (ENSVVUG00000029421) #35 CYSRT1 (ENSVVUG00000029422) #34 RNF208 (ENSVVUG00000029423) #33 NDOR1 (ENSVVUG00000029424) #32 TMEM203 (ENSVVUG00000029425) #31 ENSVVUG00000029426 #30 ANAPC2 (ENSVVUG00000029427) #28 SSNA1 (ENSVVUG00000029453) #29 TMEM210 (ENSVVUG00000029455) #27 LRRC26 (ENSVVUG00000029457) #26 GRIN1 (ENSVVUG00000029460) #25 UAP1L1 (ENSVVUG00000029468) #22 MAN1B1 (ENSVVUG00000029474) #23 DPP7 (ENSVVUG00000029481) #24 Caniformia_b ANCESTRAL SPECIES 12 ENSGT00390000009524 ENSGT00730000111343 ENSGT00940000154394.b.a.b #37 ENSGT00950000183177.a.a.a.b #36 ENSGT00510000050587 #35 ENSGT00390000003233 #34 ENSGT00680000100126 #33 ENSGT00730000114714 ENSGT00930000151050 #32 ENSGT00510000049510 #31 ENSGT00530000064035.b #30 ENSGT00390000012318 #29 ENSGT00390000016127 #28 ENSGT00940000162780 #26 ENSGT00940000158016.d #25 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000153464.A.a.h #22 ENSGT00390000008072 #21 ENSGT01100000263542.B.b #20 ENSGT00440000038604.b #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT01050000244868.a.a.b.a.a ENSGT01100000263580 #13 ENSGT01050000244868.b.b ENSGT00440000034309 #11 ENSGT00990000203858 #10 Ursidae ANCESTRAL SPECIES 6 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604.b #19 ENSGT01100000263542.B.b #20 ENSGT00940000153464.A.a.h #22 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 Ursus ANCESTRAL SPECIES 165 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 ENSGT00730000111343 Polar bear MODERN SPECIES 258 LCN8 (ENSUMAG00000023179) ENSUMAG00000023184 ENSUMAG00000023190 ENSUMAG00000023193 ENSUMAG00000023195 RABL6 (ENSUMAG00000023196) EDF1 (ENSUMAG00000023197) #7 TRAF2 (ENSUMAG00000023199) #8 FBXW5 (ENSUMAG00000023210) #9 ENSUMAG00000023211 ENSUMAG00000023212 PTGDS (ENSUMAG00000023215) #13 ENSUMAG00000023216 #15 ENSUMAG00000023221 #17 ENTPD2 (ENSUMAG00000023227) #20 ENSUMAG00000023237 #22 ENSUMAG00000023239 #23 ENSUMAG00000023247 #25 ANAPC2 (ENSUMAG00000023248) #28 SSNA1 (ENSUMAG00000023257) #29 ENSUMAG00000023258 #30 TMEM203 (ENSUMAG00000023262) #31 NDOR1 (ENSUMAG00000023264) #32 RNF208 (ENSUMAG00000023266) #33 CYSRT1 (ENSUMAG00000023267) #34 TUBB4B (ENSUMAG00000023274) #37 FAM166A (ENSUMAG00000023283) NELFB (ENSUMAG00000023286) ENSUMAG00000023289 ENSUMAG00000023305 ENTPD8 (ENSUMAG00000023309) ##20 Caniformia ANCESTRAL SPECIES 16 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00940000153464.A.a.h #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Caniformia_b ANCESTRAL SPECIES 12 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604.b #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a.h #22 ENSGT00940000159838 #24 ENSGT00940000155422 #23 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Ursidae ANCESTRAL SPECIES 6 ENSGT00390000002738.a ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604.b #19 ENSGT01100000263542.B.b #20 ENSGT00940000153464.A.a.h #22 ENSGT00940000153464.A.a.g.b #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Ursus ANCESTRAL SPECIES 118 ENSGT00390000002738.a ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT00940000169457 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604.b #19 ENSGT01100000263542.B.b #20 ENSGT00940000153464.A.a.h #22 American black bear MODERN SPECIES 2439 ENSUAMG00000022647 #13 PAXX (ENSUAMG00000022645) #15 CLIC3 (ENSUAMG00000022644) #16 ABCA2 (ENSUAMG00000022643) #17 FUT7 (ENSUAMG00000022642) #18 NPDC1 (ENSUAMG00000022641) #19 ENTPD2 (ENSUAMG00000022600) #20 UAP1L1 (ENSUAMG00000022595) #22 Mustelinae ANCESTRAL SPECIES 12 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604.b #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a.h #22 Ferret MODERN SPECIES 218 ENSMPUG00000010998 TRAF2 (ENSMPUG00000010992) #8 FBXW5 (ENSMPUG00000010965) #9 C8G (ENSMPUG00000010958) #11 LCN12 (ENSMPUG00000010941) PTGDS (ENSMPUG00000010878) #13 ENSMPUG00000010867 PAXX (ENSMPUG00000010856) #15 CLIC3 (ENSMPUG00000010834) #16 ABCA2 (ENSMPUG00000010820) #17 FUT7 (ENSMPUG00000010818) #18 NPDC1 (ENSMPUG00000010771) #19 ENTPD2 (ENSMPUG00000010766) #20 ENSMPUG00000010761 #21 ENSMPUG00000010757 UAP1L1 (ENSMPUG00000010756) #22 Laurasiatheria_c ANCESTRAL SPECIES 11 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Equus ANCESTRAL SPECIES 30 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.x #23 ENSGT00940000155422.w.b #23 ENSGT00940000159838 #24 ENSGT00940000155422.w.a #23 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 Horse MODERN SPECIES 17 LCN15 (ENSECAG00000039055) CCDC183 (ENSECAG00000018838) EDF1 (ENSECAG00000012630) #7 AJM1 (ENSECAG00000034885) MAMDC4 (ENSECAG00000041933) TRAF2 (ENSECAG00000013192) #8 FBXW5 (ENSECAG00000017033) #9 PTGDS (ENSECAG00000009262) #13 ENSECAG00000042990 CLIC3 (ENSECAG00000010895) #16 ABCA2 (ENSECAG00000015652) #17 FUT7 (ENSECAG00000016839) #18 NPDC1 (ENSECAG00000028703) #19 ENTPD2 (ENSECAG00000016865) #20 SAPCD2 (ENSECAG00000031808) #21 UAP1L1 (ENSECAG00000021012) #22 ENSECAG00000022237 #23 DPP7 (ENSECAG00000016273) #24 ENSECAG00000044290 #23 ENSECAG00000012141 #23 GRIN1 (ENSECAG00000024535) #25 ANAPC2 (ENSECAG00000019216) #28 SSNA1 (ENSECAG00000053580) #29 TPRN (ENSECAG00000023506) #30 TMEM203 (ENSECAG00000030806) #31 NDOR1 (ENSECAG00000023940) #32 CYSRT1 (ENSECAG00000003725) #34 RNF208 (ENSECAG00000039651) #33 RNF224 (ENSECAG00000037788) #35 SLC34A3 (ENSECAG00000000515) #36 TUBB4B (ENSECAG00000013659) #37 Donkey MODERN SPECIES 1 PHPT1 (ENSEASG00005026031) MAMDC4 (ENSEASG00005017483) EDF1 (ENSEASG00005017476) #7 TRAF2 (ENSEASG00005017474) #8 FBXW5 (ENSEASG00005017472) #9 ENSEASG00005017470 #11 ENSEASG00005017467 PTGDS (ENSEASG00005017465) #13 ENSEASG00005017463 PAXX (ENSEASG00005017459) #15 CLIC3 (ENSEASG00005017451) #16 ENSEASG00005028238 #17 FUT7 (ENSEASG00005017390) #18 ENTPD2 (ENSEASG00005017379) #20 SAPCD2 (ENSEASG00005017376) #21 UAP1L1 (ENSEASG00005017365) #22 ENSEASG00005029578 #23 ENSEASG00005017350 #24 ENSEASG00005017354 #23 ENSEASG00005017344 #23 GRIN1 (ENSEASG00005016289) #25 LRRC26 (ENSEASG00005016252) #26 ENSEASG00005027656 #27 ANAPC2 (ENSEASG00005016245) #28 ENSEASG00005025493 #29 ENSEASG00005016238 #30 TMEM203 (ENSEASG00005030909) #31 NDOR1 (ENSEASG00005016229) #32 ENSEASG00005036314 #34 RNF208 (ENSEASG00005026612) #33 RNF224 (ENSEASG00005016225) #35 Chiroptera ANCESTRAL SPECIES 8 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Microchiroptera ANCESTRAL SPECIES 7 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b ENSGT01100000263580 #13 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00730000114714 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00510000050587 #35 ENSGT00950000183177.a.a.a.b #36 Greater horseshoe bat MODERN SPECIES 3 PHPT1 (ENSRFEG00010005276) MAMDC4 (ENSRFEG00010005305) EDF1 (ENSRFEG00010005371) #7 TRAF2 (ENSRFEG00010005402) #8 FBXW5 (ENSRFEG00010005451) #9 C8G (ENSRFEG00010005489) #11 ENSRFEG00010005554 ENSRFEG00010005623 #13 PAXX (ENSRFEG00010005669) #15 CLIC3 (ENSRFEG00010005695) #16 ENSRFEG00010005737 #17 FUT7 (ENSRFEG00010005819) #18 NPDC1 (ENSRFEG00010005856) #19 ENTPD2 (ENSRFEG00010005901) #20 SAPCD2 (ENSRFEG00010005937) #21 UAP1L1 (ENSRFEG00010005976) #22 MAN1B1 (ENSRFEG00010006032) #23 DPP7 (ENSRFEG00010006115) #24 GRIN1 (ENSRFEG00010006502) #25 LRRC26 (ENSRFEG00010007590) #26 TMEM210 (ENSRFEG00010007616) #27 ANAPC2 (ENSRFEG00010007676) #28 SSNA1 (ENSRFEG00010007700) #29 TPRN (ENSRFEG00010007750) #30 TMEM203 (ENSRFEG00010007781) #31 NDOR1 (ENSRFEG00010007800) #32 ENSRFEG00010007881 RNF208 (ENSRFEG00010007900) #33 CYSRT1 (ENSRFEG00010007918) #34 RNF224 (ENSRFEG00010007935) #35 SLC34A3 (ENSRFEG00010007986) #36 Megabat MODERN SPECIES 1636 ENSPVAG00000002025 #9 C8G (ENSPVAG00000002029) #11 ENSPVAG00000002031 ENSPVAG00000002033 ENSPVAG00000002034 #14 PAXX (ENSPVAG00000002040) #15 CLIC3 (ENSPVAG00000002044) #16 ABCA2 (ENSPVAG00000002047) #17 ENSPVAG00000002054 NPDC1 (ENSPVAG00000002057) #19 SAPCD2 (ENSPVAG00000002061) #21 ENSPVAG00000002063 #22 DPP7 (ENSPVAG00000002065) #24 Atlantogenata ANCESTRAL SPECIES 83 ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01050000244868.b.b.c ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.y #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00390000003233 #34 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 ENSGT00730000111343 Xenarthra ANCESTRAL SPECIES 475 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.y #23 ENSGT00940000159838 #24 Armadillo MODERN SPECIES 4365 ENSDNOG00000049640 ENSDNOG00000047419 ENSDNOG00000035633 PAXX (ENSDNOG00000030696) #15 CLIC3 (ENSDNOG00000032624) #16 ENSDNOG00000044837 #17 ENSDNOG00000047119 #18 ENTPD2 (ENSDNOG00000043403) #20 ENSDNOG00000034765 #21 UAP1L1 (ENSDNOG00000037400) #22 MAN1B1 (ENSDNOG00000040197) #23 DPP7 (ENSDNOG00000025818) #24 Sloth MODERN SPECIES 7248 ENSCHOG00000009763 #22 Afrotheria ANCESTRAL SPECIES 125 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.y #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 ENSGT00730000111343 ENSGT00390000009524 Afrotheria_a ANCESTRAL SPECIES 129 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422.y #23 ENSGT00940000159838 #24 ENSGT00940000158016.d #25 ENSGT00940000162780 #26 ENSGT00390000008939 #27 ENSGT00390000016127 #28 ENSGT00390000012318 #29 ENSGT00530000064035.b #30 ENSGT00510000049510 #31 ENSGT00930000151050 #32 ENSGT00680000100126 #33 ENSGT00950000183177.a.a.a.b #36 ENSGT00940000154394.b.a.b #37 ENSGT00730000111343 ENSGT00390000009524 Elephant MODERN SPECIES 259 ENSLAFG00000028177 ENSLAFG00000026961 ENSLAFG00000031055 ENSLAFG00000005661 ABCA2 (ENSLAFG00000022620) #17 ENSLAFG00000015156 #18 NPDC1 (ENSLAFG00000011092) #19 ENTPD2 (ENSLAFG00000011099) #20 SAPCD2 (ENSLAFG00000008741) #21 UAP1L1 (ENSLAFG00000009977) #22 ENSLAFG00000027675 #23 DPP7 (ENSLAFG00000025640) #24 ENSLAFG00000025622 #23 ENSLAFG00000031097 #25 Hyrax MODERN SPECIES 8915 SAPCD2 (ENSPCAG00000001783) #21 UAP1L1 (ENSPCAG00000001733) #22 Marsupialia ANCESTRAL SPECIES 18 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.c ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 Diprotodontia ANCESTRAL SPECIES 4 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.c ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.b.c ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a.a ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 Common wonbat MODERN SPECIES 35 MAMDC4 (ENSVURG00010005821) EDF1 (ENSVURG00010005862) #7 TRAF2 (ENSVURG00010005894) #8 FBXW5 (ENSVURG00010005915) #9 C8G (ENSVURG00010005926) #11 ENSVURG00010005937 PTGDS (ENSVURG00010005951) #13 ENSVURG00010005961 ENSVURG00010005979 #15 CLIC3 (ENSVURG00010006001) #16 ENSVURG00010006222 #17 FUT7 (ENSVURG00010006238) #18 ENSVURG00010006241 ENTPD2 (ENSVURG00010006248) #20 SAPCD2 (ENSVURG00010006257) #21 UAP1L1 (ENSVURG00010006263) #22 MAN1B1 (ENSVURG00010006266) #23 DPP7 (ENSVURG00010006289) #24 ENSVURG00010006308 ENTPD8 (ENSVURG00010006336) ##20 ENSVURG00010006348 ENSVURG00010006375 NRARP (ENSVURG00010006411) TOR4A (ENSVURG00010006421) NELFB (ENSVURG00010006429) ENSVURG00010006438 FAM166A (ENSVURG00010006445) TUBB4B (ENSVURG00010006457) #37 SLC34A3 (ENSVURG00010006487) #36 RNF224 (ENSVURG00010006514) #35 CYSRT1 (ENSVURG00010006520) #34 koala MODERN SPECIES 11 MAMDC4 (ENSPCIG00000023743) EDF1 (ENSPCIG00000023737) #7 TRAF2 (ENSPCIG00000023754) #8 FBXW5 (ENSPCIG00000023766) #9 ENSPCIG00000036756 #10 C8G (ENSPCIG00000023769) #11 ENSPCIG00000023774 ENSPCIG00000000066 #13 PAXX (ENSPCIG00000000225) #15 CLIC3 (ENSPCIG00000000338) #16 ABCA2 (ENSPCIG00000000925) #17 ENSPCIG00000006169 ENSPCIG00000000166 #19 ENTPD2 (ENSPCIG00000006170) #20 SAPCD2 (ENSPCIG00000036025) #21 UAP1L1 (ENSPCIG00000006172) #22 MAN1B1 (ENSPCIG00000006173) #23 ENSPCIG00000035165 DPP7 (ENSPCIG00000006174) #24 ENSPCIG00000008555 ENTPD8 (ENSPCIG00000006178) ##20 ENSPCIG00000006179 ENSPCIG00000006180 NRARP (ENSPCIG00000031393) TOR4A (ENSPCIG00000006184) NELFB (ENSPCIG00000006188) ENSPCIG00000006190 FAM166A (ENSPCIG00000006192) TUBB4B (ENSPCIG00000006193) #37 RNF224 (ENSPCIG00000006195) #35 ENSPCIG00000006196 #34 Wallaby MODERN SPECIES 12149 ENSMEUG00000007068 #22 Tasmanian devil MODERN SPECIES 1 TRAF2 (ENSSHAG00000028753) #8 FBXW5 (ENSSHAG00000007964) #9 ENSSHAG00000008097 #11 ENSSHAG00000029489 ENSSHAG00000008440 ENSSHAG00000008790 #13 ENSSHAG00000008635 ENSSHAG00000030699 #15 CLIC3 (ENSSHAG00000008953) #16 ABCA2 (ENSSHAG00000008998) #17 FUT7 (ENSSHAG00000030571) #18 ENSSHAG00000009840 #19 ENSSHAG00000026515 ENTPD2 (ENSSHAG00000010029) #20 SAPCD2 (ENSSHAG00000027493) #21 UAP1L1 (ENSSHAG00000010429) #22 MAN1B1 (ENSSHAG00000010698) #23 ENSSHAG00000010922 #24 ENSSHAG00000011135 ENSSHAG00000011745 ##20 ENSSHAG00000011919 ENSSHAG00000001276 NRARP (ENSSHAG00000007125) TOR4A (ENSSHAG00000031816) NELFB (ENSSHAG00000007641) STPG3 (ENSSHAG00000020947) FAM166A (ENSSHAG00000008094) TUBB4B (ENSSHAG00000027647) #37 SLC34A3 (ENSSHAG00000008341) #36 RNF224 (ENSSHAG00000008546) #35 RNF208 (ENSSHAG00000029357) #33 Opossum MODERN SPECIES MAMDC4 (ENSMODG00000017335) EDF1 (ENSMODG00000017329) #7 TRAF2 (ENSMODG00000017325) #8 FBXW5 (ENSMODG00000017319) #9 C8G (ENSMODG00000017317) #11 ENSMODG00000017313 ENSMODG00000038827 #13 ENSMODG00000028812 ENSMODG00000017300 #15 CLIC3 (ENSMODG00000017298) #16 ABCA2 (ENSMODG00000017289) #17 FUT7 (ENSMODG00000017272) #18 ENSMODG00000017269 ENTPD2 (ENSMODG00000017256) #20 SAPCD2 (ENSMODG00000039583) #21 UAP1L1 (ENSMODG00000038921) #22 MAN1B1 (ENSMODG00000017244) #23 DPP7 (ENSMODG00000017239) #24 ENSMODG00000017235 ENTPD8 (ENSMODG00000017231) ##20 ENSMODG00000017225 ENSMODG00000029650 ENSMODG00000028091 NRARP (ENSMODG00000023284) TOR4A (ENSMODG00000017221) NELFB (ENSMODG00000017220) ENSMODG00000017218 FAM166A (ENSMODG00000017217) ENSMODG00000017213 #37 SLC34A3 (ENSMODG00000017206) #36 RNF224 (ENSMODG00000023283) #35 Platypus MODERN SPECIES 87 MAMDC4 (ENSOANG00000010204) PHPT1 (ENSOANG00000049298) ENSOANG00000045023 ENSOANG00000041480 ENSOANG00000036222 ENSOANG00000036983 ENSOANG00000039329 ENSOANG00000045787 #15 ENSOANG00000003710 #16 ABCA2 (ENSOANG00000042447) #17 ENSOANG00000038402 #17 FUT7 (ENSOANG00000010141) #18 ENSOANG00000045539 ENTPD2 (ENSOANG00000008774) #20 ENSOANG00000030715 UAP1L1 (ENSOANG00000036980) #22 MAN1B1 (ENSOANG00000014254) #23 ENSOANG00000044155 #24 ENSOANG00000045805 ENSOANG00000004060 ENSOANG00000039427 TUBB4B (ENSOANG00000049857) #37 ENSOANG00000050669 #34 RNF208 (ENSOANG00000049153) #33 NDOR1 (ENSOANG00000042015) #32 ENSOANG00000043569 TMEM203 (ENSOANG00000036424) #31 ANAPC2 (ENSOANG00000043132) #28 ENSOANG00000049140 #26 GRIN1 (ENSOANG00000013344) #25 NRARP (ENSOANG00000036574) Sauria ANCESTRAL SPECIES 22 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT00940000153116.D ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282 ENSGT00390000012665 ENSGT01080000257442 ENSGT00940000164772 ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000166112 ENSGT00940000165673 ENSGT00940000159996 ENSGT00940000154149.a Lepidosauria ANCESTRAL SPECIES 50 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT00940000153116.D ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 Episquamata ANCESTRAL SPECIES 15 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT00940000153116.D ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00950000182858.B ENSGT00940000155853 ENSGT00940000156689 ENSGT00940000164999 ENSGT00390000008938 ENSGT00390000018089 ENSGT00940000156868 ENSGT00390000013765 ENSGT00910000145076 ENSGT00390000005084 ENSGT00390000010743.b Laterata ANCESTRAL SPECIES 20 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT00940000153116.D ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00950000182858.B ENSGT00940000155853 ENSGT00940000156689 ENSGT00940000164999 ENSGT00390000008938 ENSGT00390000018089 ENSGT00940000156868 ENSGT00390000013765 ENSGT00910000145076 ENSGT00390000005084 ENSGT00390000010743.b Common wall lizard MODERN SPECIES 419 SLC27A4 (ENSPMRG00000023568) COQ4 (ENSPMRG00000023567) ENSPMRG00000023566 TRUB2 (ENSPMRG00000023565) ENSPMRG00000023564 ENSPMRG00000023562 DNM1 (ENSPMRG00000023474) ENSPMRG00000023444 PTGES2 (ENSPMRG00000023439) ODF2 (ENSPMRG00000023433) FUT7 (ENSPMRG00000023431) #18 ABCA2 (ENSPMRG00000023312) #17 ENSPMRG00000023231 #19 ENTPD2 (ENSPMRG00000023220) #20 SAPCD2 (ENSPMRG00000023214) #21 UAP1L1 (ENSPMRG00000023207) #22 MAN1B1 (ENSPMRG00000023196) #23 ENSPMRG00000023188 DPP7 (ENSPMRG00000023182) #24 ENSPMRG00000023179 ENSPMRG00000023176 GLT6D1 (ENSPMRG00000023173) ENSPMRG00000023170 DAB2IP (ENSPMRG00000023161) TTLL11 (ENSPMRG00000023154) ENSPMRG00000023149 ENSPMRG00000023148 ENSPMRG00000023144 LHX6 (ENSPMRG00000023138) RBM18 (ENSPMRG00000023130) ENSPMRG00000023128 Argentine black and white tegu MODERN SPECIES 52 PHPT1 (ENSSMRG00000011632) MAMDC4 (ENSSMRG00000011631) EDF1 (ENSSMRG00000011630) #7 TRAF2 (ENSSMRG00000011628) #8 FBXW5 (ENSSMRG00000011616) #9 PTGDS (ENSSMRG00000011614) #13 ENSSMRG00000011612 TMEM141 (ENSSMRG00000011600) PAXX (ENSSMRG00000011599) #15 CLIC3 (ENSSMRG00000011597) #16 ABCA2 (ENSSMRG00000011587) #17 FUT7 (ENSSMRG00000011585) #18 ENSSMRG00000011580 #19 ENTPD2 (ENSSMRG00000011579) #20 SAPCD2 (ENSSMRG00000011577) #21 UAP1L1 (ENSSMRG00000011576) #22 MAN1B1 (ENSSMRG00000011572) #23 ENSSMRG00000011538 DPP7 (ENSSMRG00000011535) #24 ENSSMRG00000011531 FCN1 (ENSSMRG00000011526) GLT6D1 (ENSSMRG00000011525) DAB2IP (ENSSMRG00000011519) TTLL11 (ENSSMRG00000011516) ENSSMRG00000011514 NDUFA8 (ENSSMRG00000011511) MORN5 (ENSSMRG00000011506) LHX6 (ENSSMRG00000011499) RBM18 (ENSSMRG00000011491) MRRF (ENSSMRG00000011490) PTGS1 (ENSSMRG00000011488) Toxicofera ANCESTRAL SPECIES 46 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01010000225451 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000166451 ENSGT00940000164721 ENSGT00950000182858.B ENSGT00940000155853 ENSGT00940000156689 ENSGT00940000164999 ENSGT00390000008938 ENSGT00390000018089 ENSGT00940000156868 ENSGT00390000013765 ENSGT00390000005084 Elapidae ANCESTRAL SPECIES 18 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01010000225451 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000166451 ENSGT00940000164721 ENSGT00950000182858.B ENSGT00940000155853 ENSGT00940000156689 ENSGT00940000164999 ENSGT00390000008938 ENSGT00390000018089 ENSGT00940000156868 ENSGT00390000013765 ENSGT00390000005084 ENSGT00940000159734 ENSGT00940000160316 Indian cobra MODERN SPECIES 8 ENSNNAG00000009345 RABL6 (ENSNNAG00000009380) AJM1 (ENSNNAG00000009447) PHPT1 (ENSNNAG00000009487) TRAF2 (ENSNNAG00000009505) #8 FBXW5 (ENSNNAG00000009552) #9 C8G (ENSNNAG00000009579) #11 PTGDS (ENSNNAG00000009605) #13 ENSNNAG00000009664 CLIC3 (ENSNNAG00000009718) #16 ABCA2 (ENSNNAG00000010443) #17 FUT7 (ENSNNAG00000016759) #18 NPDC1 (ENSNNAG00000016764) #19 ENTPD2 (ENSNNAG00000016777) #20 DPP7 (ENSNNAG00000016792) #24 UAP1L1 (ENSNNAG00000016826) #22 MAN1B1 (ENSNNAG00000016836) #23 ENSNNAG00000016860 ENSNNAG00000016870 GLT6D1 (ENSNNAG00000016882) DAB2IP (ENSNNAG00000016897) TTLL11 (ENSNNAG00000016934) ENSNNAG00000016947 NDUFA8 (ENSNNAG00000016957) ENSNNAG00000016968 ENSNNAG00000016970 LHX6 (ENSNNAG00000016976) RBM18 (ENSNNAG00000016989) MRRF (ENSNNAG00000016994) QSOX2 (ENSNNAG00000017008) ENSNNAG00000017032 Elapidae_a ANCESTRAL SPECIES 26 ENSGT00390000000543 #15 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000166451 ENSGT00940000164721 ENSGT00950000182858.B ENSGT00940000155853 ENSGT00940000156689 ENSGT00940000164999 ENSGT00390000008938 ENSGT00390000018089 ENSGT00940000156868 ENSGT00390000013765 ENSGT00390000005084 ENSGT00940000159734 ENSGT00940000160316 Acanthophiinae ANCESTRAL SPECIES 48 ENSGT00390000016002 ENSGT00390000016543 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT01030000237906 ENSGT01010000225451 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000166451 ENSGT00940000164721 ENSGT00950000182858.B Eastern brown snake MODERN SPECIES 54 ENSPTXG00000008005 RABL6 (ENSPTXG00000008006) AJM1 (ENSPTXG00000008007) PHPT1 (ENSPTXG00000008009) MAMDC4 (ENSPTXG00000008011) EDF1 (ENSPTXG00000008012) #7 TRAF2 (ENSPTXG00000008013) #8 FBXW5 (ENSPTXG00000008014) #9 ENSPTXG00000008015 ENSPTXG00000008016 CLIC3 (ENSPTXG00000008020) #16 ABCA2 (ENSPTXG00000008231) #17 FUT7 (ENSPTXG00000008232) #18 NPDC1 (ENSPTXG00000008233) #19 ENTPD2 (ENSPTXG00000008234) #20 UAP1L1 (ENSPTXG00000008244) #22 MAN1B1 (ENSPTXG00000008245) #23 DPP7 (ENSPTXG00000008249) #24 ENSPTXG00000008250 ENSPTXG00000008254 GLT6D1 (ENSPTXG00000008256) DAB2IP (ENSPTXG00000008262) TTLL11 (ENSPTXG00000008265) ENSPTXG00000008267 NDUFA8 (ENSPTXG00000008269) ENSPTXG00000008270 LHX6 (ENSPTXG00000008272) RBM18 (ENSPTXG00000008275) MRRF (ENSPTXG00000008276) QSOX2 (ENSPTXG00000008277) LHX3 (ENSPTXG00000014125) Mainland tiger snake MODERN SPECIES 269 RABL6 (ENSNSUG00000003149) AJM1 (ENSNSUG00000003146) EDF1 (ENSNSUG00000003140) #7 TRAF2 (ENSNSUG00000003134) #8 FBXW5 (ENSNSUG00000003132) #9 ENSNSUG00000003131 PAXX (ENSNSUG00000003121) #15 CLIC3 (ENSNSUG00000003117) #16 ABCA2 (ENSNSUG00000003110) #17 FUT7 (ENSNSUG00000003109) #18 NPDC1 (ENSNSUG00000003108) #19 ENTPD2 (ENSNSUG00000003107) #20 SAPCD2 (ENSNSUG00000003105) #21 UAP1L1 (ENSNSUG00000003104) #22 MAN1B1 (ENSNSUG00000003100) #23 ENSNSUG00000003098 DPP7 (ENSNSUG00000003096) #24 GLT6D1 (ENSNSUG00000003095) DAB2IP (ENSNSUG00000002997) ENSNSUG00000002996 ENSNSUG00000002995 ENSNSUG00000002994 NDUFA8 (ENSNSUG00000002993) MORN5 (ENSNSUG00000002992) LHX6 (ENSNSUG00000002991) RBM18 (ENSNSUG00000002990) MRRF (ENSNSUG00000002988) QSOX2 (ENSNSUG00000002966) TMEM250 (ENSNSUG00000002964) Blue-lipped sea krait MODERN SPECIES 2336 UAP1L1 (ENSLLTG00000002765) #22 MAN1B1 (ENSLLTG00000002780) #23 DPP7 (ENSLLTG00000002792) #24 ENSLLTG00000002800 ENSLLTG00000002807 GLT6D1 (ENSLLTG00000002814) Lizard MODERN SPECIES 2135 ENSACAG00000001493 #22 ENSACAG00000035965 #23 tuatara MODERN SPECIES 740 FUT7 (ENSSPUG00000011762) #18 ENSSPUG00000011770 NPDC1 (ENSSPUG00000011786) #19 ENTPD2 (ENSSPUG00000011801) #20 ENSSPUG00000011828 SAPCD2 (ENSSPUG00000011927) #21 UAP1L1 (ENSSPUG00000011963) #22 MAN1B1 (ENSSPUG00000012044) #23 DPP7 (ENSSPUG00000012058) #24 ENSSPUG00000012075 ENSSPUG00000012090 ENSSPUG00000012099 ENSSPUG00000012109 ENSSPUG00000012118 ENSSPUG00000012125 ENSSPUG00000012133 ENSSPUG00000012144 ENSSPUG00000012152 ENSSPUG00000012164 ENSSPUG00000012169 ENSSPUG00000012175 Archelosauria ANCESTRAL SPECIES 28 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT01100000263580 #13 ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 ENSGT01100000263542.B.b.h #20 ENSGT00390000012665 ENSGT01080000257442 ENSGT00940000164772 ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000166112 ENSGT00940000165673 Archosauria ANCESTRAL SPECIES 39 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 Aves ANCESTRAL SPECIES 21 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 ENSGT00460000041630 Neognathae ANCESTRAL SPECIES 20 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 ENSGT00460000041630 Galloanserae ANCESTRAL SPECIES 22 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 Anatidae ANCESTRAL SPECIES 13 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT01100000263561.A ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 Pink-footed goose MODERN SPECIES 8 TRAF2 (ENSABRG00000018453) #8 FBXW5 (ENSABRG00000018446) #9 ENSABRG00000018441 #11 PTGDS (ENSABRG00000018435) #13 ENSABRG00000018430 ENSABRG00000018425 ENSABRG00000018420 ENSABRG00000018415 NPDC1 (ENSABRG00000018406) #19 ENSABRG00000018401 ABCA2 (ENSABRG00000018369) #17 CLIC3 (ENSABRG00000018357) #16 PAXX (ENSABRG00000018351) #15 TMEM141 (ENSABRG00000018348) ENTPD2 (ENSABRG00000018341) #20 UAP1L1 (ENSABRG00000018322) #22 MAN1B1 (ENSABRG00000018315) #23 ENSABRG00000018296 DPP7 (ENSABRG00000018278) #24 ENSABRG00000018275 ENSABRG00000018273 ENSABRG00000018270 Duck MODERN SPECIES 35 UAP1L1 (ENSAPLG00000005633) #22 ENSAPLG00000020451 MAN1B1 (ENSAPLG00000006155) #23 DPP7 (ENSAPLG00000006425) #24 ENSAPLG00000028103 ENSAPLG00000007334 ENSAPLG00000007558 ENSAPLG00000007625 Phasianidae ANCESTRAL SPECIES 20 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT01060000248581.E ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT01070000255926 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 ENSGT00940000154323.a ENSGT00530000063725.j Japanese quail MODERN SPECIES 8 FBXW5 (ENSCJPG00005015805) #9 ENSCJPG00005015804 #10 C8G (ENSCJPG00005015803) #11 PTGDS (ENSCJPG00005015802) #13 ENSCJPG00005015800 ENSCJPG00005015798 ENSCJPG00005015796 NPDC1 (ENSCJPG00005015789) #19 ENSCJPG00005015786 FUT7 (ENSCJPG00005015784) #18 ABCA2 (ENSCJPG00005015782) #17 CLIC3 (ENSCJPG00005015781) #16 TMEM141 (ENSCJPG00005015779) ENTPD2 (ENSCJPG00005015778) #20 SAPCD2 (ENSCJPG00005015777) #21 UAP1L1 (ENSCJPG00005015776) #22 MAN1B1 (ENSCJPG00005015772) #23 DPP7 (ENSCJPG00005015771) #24 ENSCJPG00005015770 ENSCJPG00005015769 ENSCJPG00005015768 Phasianidae_b ANCESTRAL SPECIES 19 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT01060000248581.E ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT01070000255926 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 ENSGT00460000041630 ENSGT00940000154323.a ENSGT00530000063725.j Chicken MODERN SPECIES 8 FBXW5 (ENSGALG00010028456) #9 C8G (ENSGALG00010028454) #11 PTGDS (ENSGALG00010028450) #13 LCN15 (ENSGALG00010027808) EXFABP (ENSGALG00010028912) ENSGALG00010028928 NPDC1 (ENSGALG00010029140) #19 Pou5f3 (ENSGALG00010027377) CFTII (ENSGALG00010027375) #18 ABCA2 (ENSGALG00010028002) #17 CLIC3 (ENSGALG00010027993) #16 ENSGALG00010027989 TMEM141 (ENSGALG00010027987) ENTPD2 (ENSGALG00010027982) #20 SAPCD2 (ENSGALG00010027803) #21 UAP1L1 (ENSGALG00010027789) #22 MAN1B1 (ENSGALG00010028049) #23 ENSGALG00010028045 DPP7 (ENSGALG00010028042) #24 ENSGALG00010028037 ENSGALG00010028033 ANKMY1 (ENSGALG00010028026) ENSGALG00010028020 PRF1 (ENSGALG00010028016) ENSGALG00010028908 ENSGALG00010028907 ENSGALG00010028927 ENSGALG00010028926 ENSGALG00010028906 COLGALT1 (ENSGALG00010028905) Turkey MODERN SPECIES 10 TRAF2 (ENSMGAG00000000859) #8 FBXW5 (ENSMGAG00000000845) #9 C8G (ENSMGAG00000000833) #11 ENSMGAG00000000770 #13 ENSMGAG00000000767 ENSMGAG00000000761 ENSMGAG00000019929 ENSMGAG00000000742 #19 ENSMGAG00000000739 ENSMGAG00000001168 #18 ENSMGAG00000001109 #17 ENSMGAG00000001100 #16 ENSMGAG00000017767 ENTPD2 (ENSMGAG00000001070) #20 SAPCD2 (ENSMGAG00000001034) #21 UAP1L1 (ENSMGAG00000000988) #22 MAN1B1 (ENSMGAG00000000931) #23 ENSMGAG00000000920 DPP7 (ENSMGAG00000000894) #24 ENSMGAG00000000824 ENSMGAG00000000784 ENSMGAG00000020344 ENSMGAG00000000743 ENSMGAG00000000923 ENSMGAG00000000912 ENSMGAG00000017670 ENSMGAG00000019359 ENSMGAG00000000752 ENSMGAG00000018270 Neognathae_b ANCESTRAL SPECIES 21 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT01070000255926 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000166451 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 ENSGT00460000041630 Neognathae_c ANCESTRAL SPECIES 25 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT01050000244868.a.a.b.a ENSGT01050000244868.a.a.a ENSGT01100000263561.A ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT01070000255926 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000166451 ENSGT00940000164721 ENSGT00940000163282.i.a ENSGT00960000189446 Golden eagle MODERN SPECIES 16 ENSACCG00020013797 #10 C8G (ENSACCG00020013782) #11 ENSACCG00020013739 ENSACCG00020013723 ENSACCG00020013706 NPDC1 (ENSACCG00020013674) #19 ENSACCG00020013630 ENSACCG00020013611 FUT7 (ENSACCG00020013600) #18 ABCA2 (ENSACCG00020013487) #17 CLIC3 (ENSACCG00020013370) #16 ENSACCG00020013360 ENSACCG00020013350 ENTPD2 (ENSACCG00020013326) #20 SAPCD2 (ENSACCG00020013306) #21 UAP1L1 (ENSACCG00020013290) #22 MAN1B1 (ENSACCG00020013269) #23 ENSACCG00020013244 DPP7 (ENSACCG00020013228) #24 ENSACCG00020013204 ENSACCG00020013151 ENSACCG00020013139 ENSACCG00020013126 CACNA1S (ENSACCG00020013047) KIF21B (ENSACCG00020011854) ELF3 (ENSACCG00020010963) GPR37L1 (ENSACCG00020010948) ARL8A (ENSACCG00020010931) PTPN7 (ENSACCG00020010920) ENSACCG00020010909 LGR6 (ENSACCG00020010867) Kakapo MODERN SPECIES 9 C8G (ENSSHBG00005010164) #11 PTGDS (ENSSHBG00005010194) #13 ENSSHBG00005010219 ENSSHBG00005010262 ENSSHBG00005010279 NPDC1 (ENSSHBG00005010309) #19 ENSSHBG00005010333 FUT7 (ENSSHBG00005010349) #18 ABCA2 (ENSSHBG00005010693) #17 ENSSHBG00005011598 CLIC3 (ENSSHBG00005011615) #16 ENSSHBG00005011639 TMEM141 (ENSSHBG00005011657) ENTPD2 (ENSSHBG00005011671) #20 SAPCD2 (ENSSHBG00005011695) #21 UAP1L1 (ENSSHBG00005011728) #22 MAN1B1 (ENSSHBG00005011749) #23 DPP7 (ENSSHBG00005011773) #24 ENSSHBG00005011795 ENSSHBG00005011810 ENSSHBG00005011839 ENSSHBG00005011857 Passeriformes ANCESTRAL SPECIES 20 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT00960000190092 ENSGT01050000244868.a.a.a ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000163282.i.a ENSGT00960000189446 Passeriformes_d ANCESTRAL SPECIES 20 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01050000244868.a.a.b.a ENSGT01100000263580 #13 ENSGT00960000190092 ENSGT01050000244868.a.a.a ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000163282.i.a ENSGT00960000189446 Passeriformes_g ANCESTRAL SPECIES 21 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT00960000190092 ENSGT01050000244868.a.a.a ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000163282.i.a ENSGT00960000189446 Medium ground finch MODERN SPECIES 61 EDF1 (ENSGFOG00000011531) #7 TRAF2 (ENSGFOG00000011518) #8 FBXW5 (ENSGFOG00000011508) #9 C8G (ENSGFOG00000011489) #11 PTGDS (ENSGFOG00000011479) #13 ENSGFOG00000011473 ENSGFOG00000011467 NPDC1 (ENSGFOG00000011462) #19 ENSGFOG00000011457 FUT7 (ENSGFOG00000011444) #18 ABCA2 (ENSGFOG00000009926) #17 CLIC3 (ENSGFOG00000009831) #16 ENSGFOG00000009824 ENTPD2 (ENSGFOG00000009812) #20 SAPCD2 (ENSGFOG00000009802) #21 UAP1L1 (ENSGFOG00000009798) #22 MAN1B1 (ENSGFOG00000009790) #23 DPP7 (ENSGFOG00000009780) #24 ENSGFOG00000009774 ENSGFOG00000009768 Passeroidea ANCESTRAL SPECIES 21 ENSGT00390000008519 #7 ENSGT00940000156621 #8 ENSGT00730000111276 #9 ENSGT00990000203858 #10 ENSGT00440000034309 #11 ENSGT01100000263580 #13 ENSGT00960000190092 ENSGT01050000244868.a.a.a ENSGT00440000038604 #19 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000163282.i.a Zebra finch MODERN SPECIES 8 MAMDC4 (ENSTGUG00000002460) TRAF2 (ENSTGUG00000002428) #8 FBXW5 (ENSTGUG00000002426) #9 ENSTGUG00000024513 #10 C8G (ENSTGUG00000002420) #11 ENSTGUG00000002419 ENSTGUG00000021879 NPDC1 (ENSTGUG00000002413) #19 ENSTGUG00000002412 EDF1 (ENSTGUG00000002446) #7 ABCA2 (ENSTGUG00000002344) #17 CLIC3 (ENSTGUG00000025951) #16 ENTPD2 (ENSTGUG00000002332) #20 ENSTGUG00000002339 SAPCD2 (ENSTGUG00000002330) #21 UAP1L1 (ENSTGUG00000002318) #22 MAN1B1 (ENSTGUG00000002313) #23 DPP7 (ENSTGUG00000002295) #24 ENSTGUG00000027713 Common canary MODERN SPECIES 22 MAMDC4 (ENSSCAG00000010610) EDF1 (ENSSCAG00000010625) #7 TRAF2 (ENSSCAG00000010636) #8 FBXW5 (ENSSCAG00000010648) #9 C8G (ENSSCAG00000010662) #11 PTGDS (ENSSCAG00000010673) #13 ENSSCAG00000010678 NPDC1 (ENSSCAG00000010688) #19 ENSSCAG00000010701 FUT7 (ENSSCAG00000010709) #18 ABCA2 (ENSSCAG00000010900) #17 CLIC3 (ENSSCAG00000011810) #16 ENSSCAG00000011813 ENTPD2 (ENSSCAG00000011816) #20 SAPCD2 (ENSSCAG00000011823) #21 UAP1L1 (ENSSCAG00000011831) #22 MAN1B1 (ENSSCAG00000011852) #23 DPP7 (ENSSCAG00000011859) #24 ENSSCAG00000011863 Great tit MODERN SPECIES 7 TRAF2 (ENSPMJG00000015149) #8 FBXW5 (ENSPMJG00000015150) #9 C8G (ENSPMJG00000015151) #11 PTGDS (ENSPMJG00000015152) #13 ENSPMJG00000015153 ENSPMJG00000015154 NPDC1 (ENSPMJG00000015155) #19 ENSPMJG00000015156 FUT7 (ENSPMJG00000015157) #18 ENSPMJG00000015158 #17 ABCA2 (ENSPMJG00000015159) #17 ENSPMJG00000015160 #15 ENSPMJG00000015161 ENTPD2 (ENSPMJG00000015162) #20 SAPCD2 (ENSPMJG00000015163) #21 UAP1L1 (ENSPMJG00000015164) #22 MAN1B1 (ENSPMJG00000015165) #23 Australian saltwater crocodile MODERN SPECIES 44 MAMDC4 (ENSCPRG00005011092) EDF1 (ENSCPRG00005011089) #7 TRAF2 (ENSCPRG00005011079) #8 FBXW5 (ENSCPRG00005011077) #9 ENSCPRG00005011067 #11 PTGDS (ENSCPRG00005011064) #13 NPDC1 (ENSCPRG00005011060) #19 ENSCPRG00005011059 FUT7 (ENSCPRG00005011058) #18 ABCA2 (ENSCPRG00005010727) #17 CLIC3 (ENSCPRG00005010668) #16 ENSCPRG00005010659 ENSCPRG00005010658 ENTPD2 (ENSCPRG00005010655) #20 SAPCD2 (ENSCPRG00005010651) #21 UAP1L1 (ENSCPRG00005010639) #22 MAN1B1 (ENSCPRG00005010635) #23 ENSCPRG00005010632 DPP7 (ENSCPRG00005010623) #24 ENSCPRG00005010618 Cryptodira ANCESTRAL SPECIES 42 ENSGT00940000154394.b.a.b #37 ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a.a.a.b ENSGT00940000166451 ENSGT00940000163282.i.a.a.b ENSGT00940000157531.j.b ENSGT01100000263542.B.b.h #20 ENSGT00390000012665 ENSGT01080000257442 ENSGT00940000164772 ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000166112 Testudinoidea ANCESTRAL SPECIES 41 ENSGT00390000016127 #28 ENSGT00950000182888.b ENSGT00960000189388 ENSGT00940000154842.a.a ENSGT00730000111343 ENSGT00940000161436 ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a.a.a.b ENSGT00940000166451 Emydidae ANCESTRAL SPECIES 60 ENSGT00390000016127 #28 ENSGT00950000182888.b ENSGT00960000189388 ENSGT00940000154842.a.a ENSGT00730000111343 ENSGT00940000161436 ENSGT00440000038604 #19 ENSGT00960000191818 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000164721 ENSGT00940000163282.i.a.a.a.b ENSGT00940000166451 ENSGT00960000189446.a ENSGT00940000163282.i.a.b.a.b ENSGT00940000157531.j.a.b.c ENSGT00940000163282.i.a.b.a.a Three-toed box turtle MODERN SPECIES 210 TOR4A (ENSTMTG00000005577) ENSTMTG00000005587 ENSTMTG00000005608 ENSTMTG00000005638 ENSTMTG00000005707 ENSTMTG00000005731 NPDC1 (ENSTMTG00000005803) #19 ENSTMTG00000005821 FUT7 (ENSTMTG00000005831) #18 ABCA2 (ENSTMTG00000005858) #17 CLIC3 (ENSTMTG00000006067) #16 PAXX (ENSTMTG00000006133) #15 TMEM141 (ENSTMTG00000006156) ENTPD2 (ENSTMTG00000006172) #20 SAPCD2 (ENSTMTG00000006212) #21 UAP1L1 (ENSTMTG00000006257) #22 MAN1B1 (ENSTMTG00000006276) #23 DPP7 (ENSTMTG00000006324) #24 ENSTMTG00000006540 ENSTMTG00000006552 ENSTMTG00000006590 ENSTMTG00000006624 ENSTMTG00000006631 FCN1 (ENSTMTG00000006635) ENSTMTG00000006653 ENSTMTG00000006667 ENSTMTG00000006716 ENSTMTG00000003334 ENSTMTG00000003348 painted turtle MODERN SPECIES 953 ENSCPBG00000010763 #19 ENSCPBG00000010760 FUT7 (ENSCPBG00000010756) #18 ABCA2 (ENSCPBG00000010737) #17 CLIC3 (ENSCPBG00000010728) #16 PAXX (ENSCPBG00000010725) #15 TMEM141 (ENSCPBG00000010716) ENTPD2 (ENSCPBG00000010710) #20 SAPCD2 (ENSCPBG00000010706) #21 UAP1L1 (ENSCPBG00000010700) #22 MAN1B1 (ENSCPBG00000010690) #23 DPP7 (ENSCPBG00000010681) #24 ENSCPBG00000010676 ENSCPBG00000010663 ENSCPBG00000010659 Testudinidae ANCESTRAL SPECIES 64 ENSGT00390000016127 #28 ENSGT00950000182888.b ENSGT00960000189388 ENSGT00940000154842.a.a ENSGT00730000111343 ENSGT00940000161436 ENSGT00440000038604 #19 ENSGT00940000162208 ENSGT00940000161618 #18 ENSGT00940000158560 #17 ENSGT00940000161243 #16 ENSGT00390000000543 #15 ENSGT00940000153116.D ENSGT01100000263542.B.b.g #20 ENSGT00390000008072 #21 ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000159838 #24 ENSGT00940000166451 Goode s thornscrub tortoise MODERN SPECIES 7 ENSGEVG00005011193 ANAPC2 (ENSGEVG00005011230) #28 TOR4A (ENSGEVG00005011262) ENSGEVG00005011305 ENSGEVG00005011439 ENSGEVG00005011522 NPDC1 (ENSGEVG00005011676) #19 ENSGEVG00005011823 FUT7 (ENSGEVG00005011931) #18 ABCA2 (ENSGEVG00005012013) #17 CLIC3 (ENSGEVG00005013318) #16 PAXX (ENSGEVG00005013377) #15 TMEM141 (ENSGEVG00005013420) ENTPD2 (ENSGEVG00005013461) #20 SAPCD2 (ENSGEVG00005013615) #21 UAP1L1 (ENSGEVG00005013729) #22 MAN1B1 (ENSGEVG00005014141) #23 DPP7 (ENSGEVG00005014187) #24 ENSGEVG00005014218 ENSGEVG00005014257 ENSGEVG00005014319 ENSGEVG00005014710 ENSGEVG00005015252 ENSGEVG00005009912 ENSGEVG00005010026 ENSGEVG00005010356 ENSGEVG00005010397 ENSGEVG00005010463 #20 NELFB (ENSGEVG00005010663) ENSGEVG00005010709 ARRDC1 (ENSGEVG00005010739) Abingdon island giant tortoise MODERN SPECIES 568 SAPCD2 (ENSCABG00000012861) #21 UAP1L1 (ENSCABG00000012851) #22 MAN1B1 (ENSCABG00000012844) #23 ENSCABG00000012841 DPP7 (ENSCABG00000012838) #24 ENSCABG00000012830 ENSCABG00000012828 ENSCABG00000012702 ENSCABG00000012693 Chinese turtle MODERN SPECIES 206 ENSPSIG00000009188 #20 ENSPSIG00000010469 #21 UAP1L1 (ENSPSIG00000010809) #22 MAN1B1 (ENSPSIG00000011310) #23 ENSPSIG00000014691 #24 ENSPSIG00000016244 ENSPSIG00000016801 ENSPSIG00000016976 Anura ANCESTRAL SPECIES 57 ENSGT00390000016002 ENSGT00390000016543 ENSGT00390000002738.a ENSGT00940000162046 ENSGT00390000008519 #7 ENSGT00390000003828 ENSGT00940000156773 ENSGT01040000242397 ENSGT00940000161243 #16 ENSGT00940000158560 #17 ENSGT00940000161618 #18 ENSGT00440000038604 #19 ENSGT01100000263542.B.b #20 ENSGT00390000008072 #21 ENSGT00940000170043.B ENSGT00940000153464.A.a #22 ENSGT00940000155422 #23 ENSGT00940000166451 ENSGT00940000164721 ENSGT00940000163282.f.a ENSGT00940000157531 ENSGT00940000163282.e.b.b ENSGT00390000012665 ENSGT00940000164772.d ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000166112 Frog MODERN SPECIES 8 mrpl41 (ENSXETG00000044525) dph7 (ENSXETG00000041554) zmynd19 (ENSXETG00000046409) edf1 (ENSXETG00000003971) #7 coq4 (ENSXETG00000003972) trub2 (ENSXETG00000044187) paxx (ENSXETG00000038269) clic3 (ENSXETG00000003974) #16 abca2 (ENSXETG00000003978) #17 pou5f3.3 (ENSXETG00000026475) pou5f3.2 (ENSXETG00000048336) NPDC1 (ENSXETG00000045221) #19 entpd2 (ENSXETG00000019612) #20 SAPCD2 (ENSXETG00000042650) #21 ENSXETG00000037695 uap1l1 (ENSXETG00000041715) #22 man1b1 (ENSXETG00000000402) #23 ENSXETG00000049371 tesk1 (ENSXETG00000047050) ENSXETG00000041506 ENSXETG00000000396 ENSXETG00000001807 XB5954422 (ENSXETG00000031757) ENSXETG00000024910 ENSXETG00000039145 col11a2 (ENSXETG00000000395) XB5814630 [provisional:inmt] (ENSXETG00000042344) ENSXETG00000042375 ENSXETG00000044890 ENSXETG00000046274 ENSXETG00000042435 Leishan spiny toad MODERN SPECIES 12 PHPT1 (ENSLLEG00000025435) ENSLLEG00000025134 #7 COQ4 (ENSLLEG00000025030) TRUB2 (ENSLLEG00000024945) ENSLLEG00000024863 CLIC3 (ENSLLEG00000023733) #16 ABCA2 (ENSLLEG00000023074) #17 FUT7 (ENSLLEG00000023039) #18 ENSLLEG00000022982 ENSLLEG00000022913 ENSLLEG00000022749 #19 ENTPD2 (ENSLLEG00000022667) #20 SAPCD2 (ENSLLEG00000022608) #21 ENSLLEG00000022575 ENSLLEG00000022472 UAP1L1 (ENSLLEG00000022405) #22 MAN1B1 (ENSLLEG00000022062) #23 ENSLLEG00000021925 ENSLLEG00000021837 ENSLLEG00000021128 ENSLLEG00000021045 ENSLLEG00000020923 ENSLLEG00000020821 ENSLLEG00000020803 ENSLLEG00000020768 ENSLLEG00000020547 ENSLLEG00000030922 ENSLLEG00000030902 ENSLLEG00000030895 ENSLLEG00000030886 ENSLLEG00000030879 Coelacanth MODERN SPECIES 227 ENSLACG00000018528 SYS1 (ENSLACG00000018501) ACSS2 (ENSLACG00000018459) SOGA1 (ENSLACG00000018371) samhd1 (ENSLACG00000018309) GSS (ENSLACG00000018278) ENSLACG00000018133 TRPC4AP (ENSLACG00000018091) EDEM2 (ENSLACG00000018064) NDRG3 (ENSLACG00000017979) SLA2 (ENSLACG00000017924) PHF20 (ENSLACG00000017789) ENSLACG00000017763 ENSLACG00000017595 ZNF335 (ENSLACG00000017487) UAP1L1 (ENSLACG00000017391) #22 MAN1B1 (ENSLACG00000017270) #23 ENSLACG00000017137 ENSLACG00000017065 #24 zgc:113162 (ENSLACG00000016875) ENSLACG00000016759 ENSLACG00000022269 NELFB (ENSLACG00000016663) ENSLACG00000016545 ENSLACG00000016482 HELLS (ENSLACG00000016314) CYP4F8 (ENSLACG00000016275) entpd2a.1 (ENSLACG00000016053) #20 SAPCD2 (ENSLACG00000015864) #21 ENSLACG00000015683 ENSLACG00000015318 Actinopterygii ANCESTRAL SPECIES 196 ENSGT00390000000560 ENSGT00940000154043.A ENSGT00390000006287 ENSGT00390000004067 ENSGT00390000005742 ENSGT00940000156235.c ENSGT00390000012207 ENSGT00940000163383 ENSGT00940000155841 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207.a ENSGT00940000159428 ENSGT00940000153464.A.a #22 ENSGT00940000162727 ENSGT00940000167622 Neopterygii ANCESTRAL SPECIES 187 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000154043.A ENSGT00390000006287 ENSGT00390000004067 ENSGT00390000005742 ENSGT00940000156235.c ENSGT00390000012207 ENSGT00940000163383 ENSGT00940000155841 ENSGT00940000158633 ENSGT00390000001098 ENSGT00940000156811 ENSGT00450000040324.b ENSGT00940000157207.a ENSGT00940000153464.A.a #22 ENSGT00940000156902 ENSGT00940000164790 ENSGT00940000153877 ENSGT00530000065225 Osteoglossocephalai ANCESTRAL SPECIES 464 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b Osteoglossiformes ANCESTRAL SPECIES 73 ENSGT00940000158633.a.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.h ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000159875 ENSGT00940000156888.b ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00940000154115.d ENSGT00940000157986 ENSGT00950000183200.B ENSGT01010000222287.B.a.a.a.b ENSGT00550000074823.b.b ENSGT00940000156239.e ENSGT00390000002931 ENSGT00950000182936.a.b.b Asian bonytongue MODERN SPECIES 21 ENSSFOG00015024936 ENSSFOG00015033038 ENSSFOG00015031551 SCAI (ENSSFOG00015032090) PPP6C (ENSSFOG00015015094) ENSSFOG00015033015 ENSSFOG00015015138 SH3GLB2 (ENSSFOG00015015172) ENSSFOG00015015243 PIP5KL1 (ENSSFOG00015015251) dpm2 (ENSSFOG00015033056) ENSSFOG00015015295 eeig1b (ENSSFOG00015025518) NAIF1 (ENSSFOG00015015307) slc25a25b (ENSSFOG00015030265) uap1l1 (ENSSFOG00015015353) #22 zdhhc12b (ENSSFOG00015015374) ENSSFOG00015015387 sfrp1b (ENSSFOG00015015426) ENSSFOG00015015440 ENSSFOG00015025014 TCIM (ENSSFOG00015015559) ppp3ccb (ENSSFOG00015015580) ENSSFOG00015015649 ENSSFOG00015015665 adam9 (ENSSFOG00015015739) dmtn (ENSSFOG00015015782) pbdc1 (ENSSFOG00015015830) xpo7 (ENSSFOG00015015859) GFRA2 (ENSSFOG00015015943) dusp11 (ENSSFOG00015025576) P. kingsleyae MODERN SPECIES 2 ENSPKIG00000021087 ENSPKIG00000021125 MFSD14B (ENSPKIG00000021197) ENSPKIG00000021284 ENSPKIG00000021370 ENSPKIG00000021376 tdgf1 (ENSPKIG00000021384) ENSPKIG00000021393 ENSPKIG00000021405 ENSPKIG00000021414 ENSPKIG00000021435 PIP5KL1 (ENSPKIG00000021448) dpm2 (ENSPKIG00000021474) eeig1b (ENSPKIG00000021496) slc25a25b (ENSPKIG00000021548) uap1l1 (ENSPKIG00000021613) #22 zdhhc12b (ENSPKIG00000021757) ENSPKIG00000021680 SFRP1 (ENSPKIG00000021780) ENSPKIG00000021792 tcimb (ENSPKIG00000021807) ENSPKIG00000021825 ENSPKIG00000021868 ENSPKIG00000021937 ENSPKIG00000021949 rab36 (ENSPKIG00000021975) DEPDC5 (ENSPKIG00000022014) ywhah (ENSPKIG00000022072) slc5a1 (ENSPKIG00000022197) RNF208 (ENSPKIG00000022439) #33 nt5c2l1 (ENSPKIG00000022472) Clupeocephala ANCESTRAL SPECIES 51 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.b ENSGT00940000158483 ENSGT00940000153877.a.a.b ENSGT00940000156662.d ENSGT00530000063497.a.a ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000177481 ENSGT00940000153181 ENSGT00440000038585.c ENSGT00440000038585.d ENSGT00530000063156.a.a.b ENSGT00940000156340.a.c Otomorpha ANCESTRAL SPECIES 194 ENSGT00620000089226 ENSGT00940000154394.a.d ##37 ENSGT01060000248575.C ENSGT00940000153391.c.b.a.j.a ENSGT00940000157936 ENSGT00940000157194.d ENSGT00390000016384.l.a ENSGT00940000158501.d.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d ENSGT00530000063497.a.a Clupeiformes ANCESTRAL SPECIES 105 ENSGT00940000158540 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157936 ENSGT00940000157194.d ENSGT00390000016384.l.a ENSGT00940000158501.d.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d ENSGT00530000063497.a.a Atlantic herring MODERN SPECIES 3 nr5a1b (ENSCHAG00000009743) NR6A1 (ENSCHAG00000009757) OLFML2A (ENSCHAG00000009877) rpl35 (ENSCHAG00000009913) arpc5lb (ENSCHAG00000009956) SCAI (ENSCHAG00000010110) ppp6c (ENSCHAG00000010333) ENSCHAG00000010356 ENSCHAG00000010369 sh3glb2b (ENSCHAG00000010417) PIP5KL1 (ENSCHAG00000011429) dpm2 (ENSCHAG00000011439) dpm2 (ENSCHAG00000011469) eeig1b (ENSCHAG00000011493) slc25a25b (ENSCHAG00000011571) uap1l1 (ENSCHAG00000013164) #22 zdhhc12b (ENSCHAG00000013283) ENSCHAG00000013440 setb (ENSCHAG00000019128) dync2i2 (ENSCHAG00000019172) sptan1 (ENSCHAG00000019407) PTGES2 (ENSCHAG00000022991) zer1 (ENSCHAG00000023015) TBC1D13 (ENSCHAG00000023380) ODF2 (ENSCHAG00000023478) PTGES2 (ENSCHAG00000023511) zer1 (ENSCHAG00000023524) RALGDS (ENSCHAG00000023569) lmbrd2b (ENSCHAG00000023656) capslb (ENSCHAG00000023871) il7r (ENSCHAG00000023878) Denticle herring MODERN SPECIES 13 AJM1 (ENSDCDG00000027154) RABL6 (ENSDCDG00000027149) TRAF2 (ENSDCDG00000027145) #8 ENSDCDG00000024317 ENSDCDG00000024162 zgc:73226 (ENSDCDG00000024159) TMEM233 (ENSDCDG00000024157) MSI1 (ENSDCDG00000024113) crybb3 (ENSDCDG00000024110) CRYBB2 (ENSDCDG00000024109) ENSDCDG00000024107 rplp0 (ENSDCDG00000024100) CIT (ENSDCDG00000022831) ENSDCDG00000022319 CUX2 (ENSDCDG00000022242) uap1l1 (ENSDCDG00000022226) #22 zdhhc12b (ENSDCDG00000022220) ENSDCDG00000017019 setb (ENSDCDG00000016962) dync2i2 (ENSDCDG00000016959) sptan1 (ENSDCDG00000007640) ODF2 (ENSDCDG00000006952) zer1 (ENSDCDG00000006711) TBC1D13 (ENSDCDG00000005615) RALGDS (ENSDCDG00000005584) lmbrd2b (ENSDCDG00000005515) capslb (ENSDCDG00000005513) il7r (ENSDCDG00000005512) myo5b (ENSDCDG00000003609) cfap53 (ENSDCDG00000003392) ENSDCDG00000003374 Otophysi ANCESTRAL SPECIES 27 ENSGT00940000155228 ENSGT00940000156179 ENSGT00940000160156 ENSGT00940000155045 ENSGT00940000155668.j ENSGT00940000154890.a.a ENSGT01020000230351.C ENSGT00940000165424.a.b.a ENSGT00940000167171 ENSGT00940000181433 ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a Characiphysae ANCESTRAL SPECIES 65 ENSGT00390000005976.a.a.a ENSGT00940000155228 ENSGT00940000156179 ENSGT00940000160156 ENSGT00940000155045 ENSGT00940000155668.j ENSGT00940000154890.a.a ENSGT01020000230351.C ENSGT00940000167171 ENSGT00940000181433 ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000157272.h ENSGT01030000234517.E.c ENSGT00940000158557.l ENSGT00390000017839 ENSGT00940000156747 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 Channel catfish MODERN SPECIES 20 spns3 (ENSIPUG00000009962) ube2g1a (ENSIPUG00000010059) ankfy1 (ENSIPUG00000010171) cyb5d2 (ENSIPUG00000010275) ZZEF1 (ENSIPUG00000010298) ATP2A3 (ENSIPUG00000010531) camkk1 (ENSIPUG00000010647) p2rx1 (ENSIPUG00000010709) Megf9 (ENSIPUG00000010740) si:dkey-220k22.3 (ENSIPUG00000010764) sh3glb2 (ENSIPUG00000010785) pip5kl1 (ENSIPUG00000010909) DPM2 (ENSIPUG00000010963) fam102a (ENSIPUG00000011001) slc25a25b (ENSIPUG00000011070) uap1l1 (ENSIPUG00000011115) #22 Zdhhc12 (ENSIPUG00000011134) pkn3 (ENSIPUG00000011154) ENSIPUG00000011255 rplp0 (ENSIPUG00000011275) ENSIPUG00000011377 CIT (ENSIPUG00000011395) ENSIPUG00000011469 Rab35 (ENSIPUG00000011489) dhx33 (ENSIPUG00000011594) nupr1a (ENSIPUG00000011648) Vkorc1l1 (ENSIPUG00000011671) GUSB (ENSIPUG00000011688) ca4a (ENSIPUG00000011729) ca4a (ENSIPUG00000011745) mtmr4 (ENSIPUG00000011795) Characiphysae_b ANCESTRAL SPECIES 43 ENSGT00390000005976.a.a.b ENSGT00390000005976.a.a.a ENSGT00940000155228 ENSGT00940000156179 ENSGT00940000160156 ENSGT00940000155045 ENSGT00940000155668.j ENSGT00940000154890.a.a ENSGT01020000230351.C ENSGT00940000165424.a.b.a ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000157272.h ENSGT01030000234517.E.c ENSGT00940000158557.l ENSGT00390000017839 ENSGT00940000156747 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 Characoidei ANCESTRAL SPECIES 69 ENSGT00390000005976.a.a.b ENSGT00390000005976.a.a.a ENSGT00940000155228 ENSGT00940000156179 ENSGT00940000160156 ENSGT00940000155045 ENSGT00940000155668.j ENSGT00940000154890.a.a ENSGT01020000230351.C ENSGT00940000165424.a.b.a ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000157272.h ENSGT01030000234517.E.c ENSGT00940000158557.l ENSGT00390000017839 Red-bellied piranha MODERN SPECIES 77 spns3 (ENSPNAG00000012884) ube2g1a (ENSPNAG00000012902) ankfy1 (ENSPNAG00000012957) cyb5d2 (ENSPNAG00000012963) ZZEF1 (ENSPNAG00000013241) ATP2A3 (ENSPNAG00000013329) camkk1a (ENSPNAG00000013348) p2rx1 (ENSPNAG00000013377) ENSPNAG00000013393 ENSPNAG00000002732 sh3glb2b (ENSPNAG00000002785) PIP5KL1 (ENSPNAG00000013549) dpm2 (ENSPNAG00000013566) eeig1b (ENSPNAG00000013632) slc25a25b (ENSPNAG00000002899) uap1l1 (ENSPNAG00000013743) #22 zdhhc12b (ENSPNAG00000013755) ENSPNAG00000013784 ENSPNAG00000013847 ENSPNAG00000002974 CIT (ENSPNAG00000002997) RAB35 (ENSPNAG00000014046) ENSPNAG00000014078 rplp0 (ENSPNAG00000014115) rplp0 (ENSPNAG00000003031) thnsl2 (ENSPNAG00000014170) fabp1a (ENSPNAG00000003044) smyd1a (ENSPNAG00000014243) spra (ENSPNAG00000003062) exosc2 (ENSPNAG00000014281) ABL1 (ENSPNAG00000014319) Mexicana tetra MODERN SPECIES 111 ENSAMXG00000029952 ENSAMXG00000015618 camkk1a (ENSAMXG00000015563) p2rx1 (ENSAMXG00000015519) ENSAMXG00000015482 sh3glb2b (ENSAMXG00000015535) PIP5KL1 (ENSAMXG00000038219) ENSAMXG00000035171 dpm2 (ENSAMXG00000039909) eeig1b (ENSAMXG00000015583) slc25a25b (ENSAMXG00000032526) uap1l1 (ENSAMXG00000031169) #22 zdhhc12b (ENSAMXG00000038016) ENSAMXG00000015680 ENSAMXG00000042517 ENSAMXG00000035590 CIT (ENSAMXG00000015739) RAB35 (ENSAMXG00000040604) rplp0 (ENSAMXG00000032613) GUSB (ENSAMXG00000042392) vkorc1l1 (ENSAMXG00000015856) nupr1a (ENSAMXG00000024841) dhx33 (ENSAMXG00000015875) ca4a (ENSAMXG00000043073) ENSAMXG00000024842 MTMR4 (ENSAMXG00000015899) hpda (ENSAMXG00000015913) Electric eel MODERN SPECIES 151 sh3glb2b (ENSEEEG00000002545) PIP5KL1 (ENSEEEG00000002529) dpm2 (ENSEEEG00000002527) eeig1b (ENSEEEG00000002521) slc25a25b (ENSEEEG00000002519) uap1l1 (ENSEEEG00000002515) #22 zdhhc12b (ENSEEEG00000002513) ENSEEEG00000002363 ENSEEEG00000002047 CIT (ENSEEEG00000002042) RAB35 (ENSEEEG00000002040) rplp0 (ENSEEEG00000002037) dhx33 (ENSEEEG00000002030) nupr1a (ENSEEEG00000002029) vkorc1l1 (ENSEEEG00000002028) GUSB (ENSEEEG00000002023) ca4a (ENSEEEG00000002021) MTMR4 (ENSEEEG00000000811) hpda (ENSEEEG00000000413) ENSEEEG00000000407 ENSEEEG00000000404 Cyprinoidei ANCESTRAL SPECIES 19 ENSGT00940000155228 ENSGT00940000156179 ENSGT00940000160156 ENSGT00940000155045 ENSGT00940000155668.j ENSGT00940000154890.a.a ENSGT01020000230351.C ENSGT00940000165424.a.b.a ENSGT00940000167171 ENSGT00940000181433 ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00390000015813.b.b ENSGT00390000017134 ENSGT00940000156488.a.a ENSGT00940000156133.a.b ENSGT00940000155403.b ENSGT00940000156430.b ENSGT00550000074961.b ENSGT00390000009566 ENSGT00940000158501.d.a ENSGT00390000009869 ENSGT00940000159368.a ENSGT00940000155845.t ENSGT00420000029890 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00390000005976.a.a.a.k ENSGT00940000155228.a ENSGT00940000156179.b ENSGT00940000160156.d ENSGT00940000155045.v.a ENSGT00940000155668.j.a ENSGT00940000154890.a.a.b ENSGT01020000230351.C.c ENSGT00940000167171 ENSGT00940000181433 ENSGT00940000155841.c.b.e ENSGT00940000158633.a.i ENSGT00390000001098.h ENSGT00940000156811.b.a ENSGT00940000157207.a.a.a ENSGT00940000153464.A.a.a #22 ENSGT00940000156902.b.b ENSGT00940000164790.a.a ENSGT00390000015813.b.b.a ENSGT00390000017134.c ENSGT00940000156488.a.a.b ENSGT00940000156133.a.b.a.b ENSGT00940000155403.b.a ENSGT00940000156430.b.a ENSGT00550000074961.b.a ENSGT00390000009566.e ENSGT00940000158501.d.a.b ENSGT00390000009869.b ENSGT00940000159368.a.e ENSGT00940000155845.t.a ENSGT00420000029890.b Goldfish MODERN SPECIES 44 ENSCARG00000002759 ZZEF1 (ENSCARG00000002886) ATP2A3 (ENSCARG00000003755) camkk1a (ENSCARG00000011296) p2rx1 (ENSCARG00000011685) ENSCARG00000011701 ENSCARG00000011709 sdhda (ENSCARG00000011713) BCO2 (ENSCARG00000011743) ENSCARG00000011913 sh3glb2b (ENSCARG00000011929) PIP5KL1 (ENSCARG00000012168) dpm2 (ENSCARG00000012183) eeig1b (ENSCARG00000012202) slc25a25b (ENSCARG00000012225) uap1l1 (ENSCARG00000012362) #22 zdhhc12b (ENSCARG00000012392) ENSCARG00000012421 iscub (ENSCARG00000012601) tmem119b (ENSCARG00000012608) CORO1C (ENSCARG00000012623) SSH1 (ENSCARG00000012661) ENSCARG00000012671 ENSCARG00000012674 ENSCARG00000012682 ppp6c (ENSCARG00000012689) SCAI (ENSCARG00000012706) arpc5lb (ENSCARG00000012900) ENSCARG00000012906 CABP7 (ENSCARG00000012947) tescb (ENSCARG00000012951) Cyprininae_a ANCESTRAL SPECIES ENSGT00390000005976.a.a.a.k ENSGT00940000155228.a ENSGT00940000156179.b ENSGT00940000160156.d ENSGT00940000155045.v.a ENSGT00940000155668.j.a ENSGT00940000154890.a.a.b ENSGT01020000230351.C.c ENSGT00940000167171 ENSGT00940000181433 ENSGT00940000155841.c.b.e ENSGT00940000158633.a.i ENSGT00390000001098.h ENSGT00940000156811.b.a ENSGT00940000157207.a.a.a ENSGT00940000153464.A.a.a #22 ENSGT00940000156902.b.b ENSGT00940000164790.a.a ENSGT00390000015813.b.b.a ENSGT00390000017134.c ENSGT00940000156488.a.a.b ENSGT00940000156133.a.b.a.b ENSGT00940000155403.b.a ENSGT00940000156430.b.a ENSGT00550000074961.b.a ENSGT00390000009566.e ENSGT00940000158501.d.a.b ENSGT00390000009869.b ENSGT00940000159368.a.e ENSGT00940000155845.t.a ENSGT00420000029890.b Common carp reference MODERN SPECIES 7 spns3 (ENSCCRG00000001109) ube2g1a (ENSCCRG00000039970) ankfy1 (ENSCCRG00000001041) cyb5d2 (ENSCCRG00000050606) ZZEF1 (ENSCCRG00000000855) ATP2A3 (ENSCCRG00000082221) p2rx1 (ENSCCRG00000043217) camkk1a (ENSCCRG00000057115) ENSCCRG00000073770 si:dkey-220k22.3 (ENSCCRG00000054177) sh3glb2b (ENSCCRG00000001223) PIP5KL1 (ENSCCRG00000001116) dpm2 (ENSCCRG00000073177) eeig1b (ENSCCRG00000045024) slc25a25b (ENSCCRG00000035251) uap1l1 (ENSCCRG00000035262) #22 ENSCCRG00000043628 iscub (ENSCCRG00000079221) tmem119b (ENSCCRG00000043610) CORO1C (ENSCCRG00000066412) SSH1 (ENSCCRG00000061259) ENSCCRG00000043601 ENSCCRG00000013478 ENSCCRG00000058260 ENSCCRG00000022113 ppp6c (ENSCCRG00000015492) SCAI (ENSCCRG00000015472) ENSCCRG00000053489 arpc5lb (ENSCCRG00000063903) zmat5 (ENSCCRG00000074583) ENSCCRG00000013913 Golden-line barbel MODERN SPECIES 91 SPNS2 (ENSSGRG00000011371) spns3 (ENSSGRG00000011437) ube2g1a (ENSSGRG00000011438) ZZEF1 (ENSSGRG00000011466) cyb5d2 (ENSSGRG00000012297) ATP2A3 (ENSSGRG00000012298) camkk1a (ENSSGRG00000012570) p2rx1 (ENSSGRG00000012571) ENSSGRG00000012573 ENSSGRG00000012576 sh3glb2b (ENSSGRG00000012578) PIP5KL1 (ENSSGRG00000012733) dpm2 (ENSSGRG00000012734) eeig1b (ENSSGRG00000012735) slc25a25b (ENSSGRG00000012736) uap1l1 (ENSSGRG00000012887) #22 zdhhc12b (ENSSGRG00000014406) ENSSGRG00000012941 iscub (ENSSGRG00000014410) tmem119b (ENSSGRG00000014411) CORO1C (ENSSGRG00000014417) ENSSGRG00000014783 ENSSGRG00000014912 ppp6c (ENSSGRG00000015311) SCAI (ENSSGRG00000015473) arpc5lb (ENSSGRG00000015477) zmat5 (ENSSGRG00000015486) CABP7 (ENSSGRG00000015487) tescb (ENSSGRG00000015488) m17 (ENSSGRG00000015489) ENSSGRG00000015492 Cyprininae ANCESTRAL SPECIES 48 ENSGT00940000178429 ENSGT00390000005976.a.a.a.l ENSGT00940000155228.b ENSGT00940000156179.a ENSGT00940000160156.c ENSGT00940000155045.v.b ENSGT00940000155668.j.b ENSGT00940000154890.a.a.a ENSGT01020000230351.C.d ENSGT00940000165424.a.b.a ENSGT00940000155841.c.b.f ENSGT00940000158633.a.j ENSGT00390000001098.g ENSGT00940000156811.b.b ENSGT00940000157207.a.a.b ENSGT00940000153464.A.a.b #22 ENSGT00940000156902.b.a ENSGT00940000164790.a.b ENSGT00390000015813.b.b.b ENSGT00390000017134.d ENSGT00940000156488.a.a.a ENSGT00940000156133.a.b.a.a ENSGT00940000155403.b.b ENSGT00390000003405.r ENSGT00940000156430.b.b ENSGT00550000074961.b.b ENSGT00390000009566.f ENSGT00940000158501.d.a.a ENSGT00390000009869.a ENSGT00940000159368.a.f ENSGT00940000155845.t.b Goldfish MODERN SPECIES 23 ENSCARG00000042186 B3GNT3 (ENSCARG00000042616) ENSCARG00000042625 LONRF1 (ENSCARG00000042637) ENSCARG00000042675 ENSCARG00000042689 ENSCARG00000042700 camkk1a (ENSCARG00000042736) p2rx1 (ENSCARG00000043008) ENSCARG00000043089 sh3glb2b (ENSCARG00000043320) PIP5KL1 (ENSCARG00000047006) dpm2 (ENSCARG00000047012) eeig1b (ENSCARG00000047028) slc25a25b (ENSCARG00000047062) uap1l1 (ENSCARG00000047496) #22 zdhhc12b (ENSCARG00000047654) ENSCARG00000047714 iscub (ENSCARG00000048000) tmem119b (ENSCARG00000048056) CORO1C (ENSCARG00000048091) SSH1 (ENSCARG00000048309) ENSCARG00000048542 ENSCARG00000023674 ENSCARG00000023889 ppp6c (ENSCARG00000023960) SCAI (ENSCARG00000024008) arpc5lb (ENSCARG00000024105) zmat5 (ENSCARG00000024113) CABP7 (ENSCARG00000024119) mblac2 (ENSCARG00000024128) Cyprininae_a ANCESTRAL SPECIES 22 ENSGT00940000178429 ENSGT00390000005976.a.a.a.l ENSGT00940000155228.b ENSGT00940000156179.a ENSGT00940000160156.c ENSGT00940000155045.v.b ENSGT00940000155668.j.b ENSGT00940000154890.a.a.a ENSGT01020000230351.C.d ENSGT00940000165424.a.b.a ENSGT00940000155841.c.b.f ENSGT00940000158633.a.j ENSGT00390000001098.g ENSGT00940000156811.b.b ENSGT00940000157207.a.a.b ENSGT00940000153464.A.a.b #22 ENSGT00940000156902.b.a ENSGT00940000164790.a.b ENSGT00390000015813.b.b.b ENSGT00390000017134.d ENSGT00940000156488.a.a.a ENSGT00940000156133.a.b.a.a ENSGT00940000155403.b.b ENSGT00390000003405.r.a ENSGT00940000156430.b.b ENSGT00550000074961.b.b ENSGT00390000009566.f ENSGT00940000158501.d.a.a ENSGT00390000009869.a ENSGT00940000159368.a.f ENSGT00940000155845.t.b Golden-line barbel MODERN SPECIES 11 SPNS2 (ENSSGRG00000015047) spns3 (ENSSGRG00000014973) ube2g1a (ENSSGRG00000014972) ankfy1 (ENSSGRG00000014947) cyb5d2 (ENSSGRG00000014946) ZZEF1 (ENSSGRG00000014910) ATP2A3 (ENSSGRG00000010484) camkk1a (ENSSGRG00000010402) p2rx1 (ENSSGRG00000010400) ENSSGRG00000010399 sh3glb2b (ENSSGRG00000009964) PIP5KL1 (ENSSGRG00000009959) dpm2 (ENSSGRG00000009955) eeig1b (ENSSGRG00000009954) ENSSGRG00000009952 uap1l1 (ENSSGRG00000009948) #22 zdhhc12b (ENSSGRG00000009947) iscub (ENSSGRG00000009945) ENSSGRG00000008073 tmem119b (ENSSGRG00000008027) CORO1C (ENSSGRG00000007775) SSH1 (ENSSGRG00000007759) ENSSGRG00000007683 ENSSGRG00000007674 ENSSGRG00000007672 ppp6c (ENSSGRG00000007638) SCAI (ENSSGRG00000007582) arpc5lb (ENSSGRG00000007551) zmat5 (ENSSGRG00000007548) ENSSGRG00000007547 tescb (ENSSGRG00000007539) Common carp reference MODERN SPECIES 15 ube2g1a (ENSCCRG00000050674) spns3 (ENSCCRG00000050665) ankfy1 (ENSCCRG00000050616) cyb5d2 (ENSCCRG00000073193) ZZEF1 (ENSCCRG00000050513) ATP2A3 (ENSCCRG00000063567) camkk1a (ENSCCRG00000001072) p2rx1 (ENSCCRG00000001092) ENSCCRG00000054493 ENSCCRG00000067899 sh3glb2b (ENSCCRG00000082497) PIP5KL1 (ENSCCRG00000001277) dpm2 (ENSCCRG00000001124) eeig1b (ENSCCRG00000073349) slc25a25b (ENSCCRG00000072555) uap1l1 (ENSCCRG00000043788) #22 zdhhc12b (ENSCCRG00000075169) ENSCCRG00000035274 iscub (ENSCCRG00000078158) tmem119b (ENSCCRG00000078981) CORO1C (ENSCCRG00000042332) SSH1 (ENSCCRG00000042301) ENSCCRG00000071765 ENSCCRG00000080749 ENSCCRG00000027480 ENSCCRG00000070021 ENSCCRG00000064453 arpc5lb (ENSCCRG00000080558) zmat5 (ENSCCRG00000013915) ENSCCRG00000072451 tescb (ENSCCRG00000013896) Zebrafish MODERN SPECIES 20 spns3 (ENSDARG00000035459) ube2g1a (ENSDARG00000015292) ankfy1 (ENSDARG00000061013) cyb5d2 (ENSDARG00000061006) ZZEF1 (ENSDARG00000094380) ATP2A3 (ENSDARG00000060978) camkk1a (ENSDARG00000035452) p2rx1 (ENSDARG00000016695) ENSDARG00000035471 si:dkey-220k22.3 (ENSDARG00000094693) sh3glb2b (ENSDARG00000035470) PIP5KL1 (ENSDARG00000060946) dpm2 (ENSDARG00000095623) eeig1b (ENSDARG00000016866) slc25a25b (ENSDARG00000035468) uap1l1 (ENSDARG00000013082) #22 zdhhc12b (ENSDARG00000052787) ENSDARG00000079585 iscub (ENSDARG00000026582) tmem119b (ENSDARG00000068036) CORO1C (ENSDARG00000021193) SSH1 (ENSDARG00000010031) ENSDARG00000014951 UNG (ENSDARG00000094922) ENSDARG00000078603 ppp6c (ENSDARG00000002949) SCAI (ENSDARG00000060865) arpc5lb (ENSDARG00000035433) zmat5 (ENSDARG00000035434) CABP7 (ENSDARG00000060846) tescb (ENSDARG00000030839) Euteleosteomorpha ANCESTRAL SPECIES 15 ENSGT00940000160918 ENSGT00940000153601.a.a.e.b.a ENSGT00940000156235.c.a ENSGT01020000230412.A.c.a ENSGT00390000008220 ENSGT00940000154043.A.j.b ENSGT00390000006287 ENSGT00390000004067 ENSGT00390000005742.x ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000156662.d ENSGT00530000063497.a.a ENSGT00940000163205.d ENSGT00940000166931 ENSGT00940000161345 ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT01020000230351.D.a.a.a ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c ENSGT00940000156340.a.c ENSGT00530000063156.a.a.b Acanthomorphata ANCESTRAL SPECIES 82 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000157955.d.a ENSGT00940000160616 ENSGT00940000154079.b ENSGT00940000155946.c.b Euacanthomorphacea ANCESTRAL SPECIES 54 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000157955.d.a ENSGT00940000160616 ENSGT00940000154079.b ENSGT00940000155946.c.b Percomorphaceae ANCESTRAL SPECIES 42 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Ovalentaria ANCESTRAL SPECIES 16 ENSGT00390000000642 ENSGT00940000155945.i.a ENSGT00940000157955.d.a ENSGT00940000153391.c.b.a.j.b ENSGT00940000157419 ENSGT00940000159990 ENSGT00940000156261 ENSGT00940000178133 ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000155946.c.b ENSGT00940000154079.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Atherinomorphae ANCESTRAL SPECIES 74 ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000154079.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 Cyprinodontiformes ANCESTRAL SPECIES 27 ENSGT00530000066485 ENSGT00390000012898 ENSGT01050000244924.a.a.a ENSGT00940000156729 ENSGT00390000002634.a.f.b.a.a.a ENSGT00940000156466 ENSGT01030000234908 ENSGT00510000049239.b.a ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00390000007918 ENSGT00940000156340.a.d ENSGT00940000165669 ENSGT00390000009566 ENSGT00530000063497.a.a ENSGT00940000156662.d.f ENSGT00940000158483 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Cyprinodontoidei ANCESTRAL SPECIES 33 ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.b.a ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00500000044904.a.b.e.a.l.d.a.a.a.b ENSGT00500000044904.a.b.e.a.l.d.b.b.a ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a ENSGT00500000044904.a.b.e.a.l.d.b.b.b ENSGT00500000044904.a.b.e.a.l.d.a.a.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00390000007918 ENSGT00940000156340.a.d ENSGT00940000171469 ENSGT00940000167171 ENSGT00550000074961.a ENSGT00390000009566 ENSGT00530000063497.a.a ENSGT00940000156662.d.f ENSGT00940000158483 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w Poeciliinae ANCESTRAL SPECIES 12 ENSGT00500000044904.a.b.e.a.l.c ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b.z ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00500000044904.a.b.e.a.l.d.a.a.a.b ENSGT00500000044904.a.b.e.a.l.d.a.b ENSGT00500000044904.a.b.e.a.l.d.b.b.a ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a ENSGT00500000044904.a.b.e.a.l.d.b.b.b ENSGT00500000044904.a.b.e.a.l.d.a.a.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a.g ENSGT00940000164790.a.h ENSGT00940000153877.a.a.b ENSGT00390000007918 ENSGT00940000156340.a.d ENSGT00940000167171 ENSGT00550000074961.a ENSGT00390000009566 ENSGT00530000063497.a.a ENSGT00940000156662.d.f ENSGT00940000158483 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w Poecilia ANCESTRAL SPECIES 53 ENSGT00500000044904.a.b.e.a.l.c ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b.z ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00500000044904.a.b.e.a.l.d.a.a.a.b ENSGT00500000044904.a.b.e.a.l.d.a.b ENSGT00500000044904.a.b.e.a.l.d.b.b.a ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a ENSGT00500000044904.a.b.e.a.l.d.b.b.b ENSGT00500000044904.a.b.e.a.l.d.a.a.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a.g ENSGT00940000153877.a.a.b ENSGT00390000007918 ENSGT00940000156340.a.d ENSGT00940000167171 ENSGT00550000074961.a ENSGT00390000009566 ENSGT00530000063497.a.a ENSGT00940000156662.d.f ENSGT00940000158483 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c NAME_6 ANCESTRAL SPECIES 102 ENSGT00500000044904.a.b.e.a.l.d.b.b.a.a ENSGT00500000044904.a.b.e.a.l.d.a.b ENSGT00500000044904.a.b.e.a.l.d.b.b.a.b ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a.a ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a.b ENSGT00500000044904.a.b.e.a.l.d.b.b.b ENSGT00500000044904.a.b.e.a.l.d.a.a.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a.g ENSGT00940000153877.a.a.b ENSGT00390000007918 ENSGT00940000156340.a.d ENSGT00390000009566 ENSGT00530000063497.a.a ENSGT00940000156662.d.f ENSGT00940000158483 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 Sailfin molly MODERN SPECIES 788 ENSPLAG00000018499 ENSPLAG00000018516 ENSPLAG00000018524 ENSPLAG00000018528 derl2 (ENSPLAG00000018551) smarcb1b (ENSPLAG00000018556) slc25a25b (ENSPLAG00000018590) uap1l1 (ENSPLAG00000018625) #22 zdhhc12b (ENSPLAG00000018670) ENSPLAG00000018684 setb (ENSPLAG00000000580) skp2 (ENSPLAG00000018697) MMP11 (ENSPLAG00000018706) PPP6C (ENSPLAG00000018741) SCAI (ENSPLAG00000018780) ODF2 (ENSPLAG00000018793) ENSPLAG00000018806 ENSPLAG00000018828 ENSPLAG00000018835 ENSPLAG00000000428 ENSPLAG00000018865 dync2i2 (ENSPLAG00000018879) ENSPLAG00000018888 Amazon molly MODERN SPECIES 985 ENSPFOG00000022760 ENSPFOG00000020556 ENSPFOG00000020557 derl2 (ENSPFOG00000018746) smarcb1b (ENSPFOG00000018757) slc25a25b (ENSPFOG00000018777) uap1l1 (ENSPFOG00000018803) #22 zdhhc12b (ENSPFOG00000018817) ENSPFOG00000018832 setb (ENSPFOG00000018872) skp2 (ENSPFOG00000018883) MMP11 (ENSPFOG00000018895) PPP6C (ENSPFOG00000018905) Guppy MODERN SPECIES 442 ENSPREG00000006339 capslb (ENSPREG00000006331) ENSPREG00000006319 ENSPREG00000006303 lmbrd2b (ENSPREG00000006271) ppp1r3b (ENSPREG00000006244) ENSPREG00000006238 ENSPREG00000006233 ENSPREG00000006226 ENSPREG00000006221 ENSPREG00000006216 derl2 (ENSPREG00000006206) ENSPREG00000006196 smarcb1b (ENSPREG00000006179) SLC25A23 (ENSPREG00000006162) uap1l1 (ENSPREG00000006147) #22 zdhhc12b (ENSPREG00000006134) ENSPREG00000006079 setb (ENSPREG00000006032) ENSPREG00000005998 MMP11 (ENSPREG00000005982) PPP6C (ENSPREG00000005967) SCAI (ENSPREG00000005929) ENSPREG00000005880 EFNA5 (ENSPREG00000005858) PIGO (ENSPREG00000005809) stoml2 (ENSPREG00000005792) ENSPREG00000005759 ENSPREG00000005616 ENSPREG00000005565 ENSPREG00000005524 Platyfish MODERN SPECIES 22 ENSXMAG00000024704 ENSXMAG00000006116 lmbrd2b (ENSXMAG00000001349) ppp1r3b (ENSXMAG00000024801) ENSXMAG00000025958 ENSXMAG00000019780 ENSXMAG00000021293 ENSXMAG00000025162 ENSXMAG00000019493 ENSXMAG00000019681 ENSXMAG00000029978 ENSXMAG00000025213 derl2 (ENSXMAG00000016828) smarcb1b (ENSXMAG00000016803) slc25a25b (ENSXMAG00000016773) uap1l1 (ENSXMAG00000016749) #22 zdhhc12b (ENSXMAG00000016743) ENSXMAG00000026234 ENSXMAG00000022015 ENSXMAG00000013697 setb (ENSXMAG00000013718) ENSXMAG00000013731 MMP11 (ENSXMAG00000013737) PPP6C (ENSXMAG00000013741) SCAI (ENSXMAG00000021091) ENSXMAG00000026744 ENSXMAG00000021401 ODF2 (ENSXMAG00000008364) ENSXMAG00000027933 ENSXMAG00000028933 ENSXMAG00000023116 NAME_4 ANCESTRAL SPECIES 93 ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.b.a ENSGT00940000156466 ENSGT00510000049239.b.a ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00500000044904.a.b.e.a.l.d.a.a.a.b ENSGT00500000044904.a.b.e.a.l.d.b.b.a ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a ENSGT00500000044904.a.b.e.a.l.d.b.b.b ENSGT00500000044904.a.b.e.a.l.d.a.a.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00390000007918 ENSGT00940000156340.a.d ENSGT01060000248544.b ENSGT00940000167171 ENSGT00550000074961.a ENSGT00390000009566 ENSGT00530000063497.a.a ENSGT00940000156662.d.f ENSGT00940000158483 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w Mummichog MODERN SPECIES 271 capslb (ENSFHEG00000006310) ENSFHEG00000006321 ENSFHEG00000006336 ENSFHEG00000006347 lmbrd2b (ENSFHEG00000006374) ppp1r3b (ENSFHEG00000006380) ENSFHEG00000006385 ENSFHEG00000006403 ENSFHEG00000006408 ENSFHEG00000006411 ENSFHEG00000006425 ENSFHEG00000006430 derl2 (ENSFHEG00000006458) smarcb1b (ENSFHEG00000000172) slc25a25b (ENSFHEG00000006493) uap1l1 (ENSFHEG00000006503) #22 zdhhc12b (ENSFHEG00000006516) ENSFHEG00000006530 setb (ENSFHEG00000006560) skp2 (ENSFHEG00000006566) MMP11 (ENSFHEG00000006581) PPP6C (ENSFHEG00000006612) SCAI (ENSFHEG00000006745) ODF2 (ENSFHEG00000006781) ENSFHEG00000000185 ENSFHEG00000006868 ENSFHEG00000007094 dync2i2 (ENSFHEG00000007112) nadk2 (ENSFHEG00000007202) slc1a3b (ENSFHEG00000007262) smyd1a (ENSFHEG00000007290) Aplocheiloidei ANCESTRAL SPECIES 338 ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 Turquoise killifish MODERN SPECIES 1611 SPR (ENSNFUG00015002844) SLC1A3B (ENSNFUG00015002661) nadk2 (ENSNFUG00015002618) DYNC2I1 (ENSNFUG00015002609) sptan1 (ENSNFUG00015002171) ODF2 (ENSNFUG00015002036) SCAI (ENSNFUG00015001894) PPP6C (ENSNFUG00015001829) skp2 (ENSNFUG00015001788) ENSNFUG00015001770 setb (ENSNFUG00015001763) derl2 (ENSNFUG00015001746) SMARCB1 (ENSNFUG00015001731) ENSNFUG00015001728 slc25a25b (ENSNFUG00015001611) uap1l1 (ENSNFUG00015001551) #22 ppp1r3b (ENSNFUG00015001421) LMBRD2B (ENSNFUG00015001319) ENSNFUG00015001290 capslb (ENSNFUG00015001281) HSDL2 (ENSNFUG00015001247) PTBP3 (ENSNFUG00015000995) UGCG (ENSNFUG00015000920) ENSNFUG00015000911 MOCS2 (ENSNFUG00015000906) ENSNFUG00015000720 ENSNFUG00015000623 slc25a46 (ENSNFUG00015000558) ATP6V1G1 (ENSNFUG00015000529) slc31a1 (ENSNFUG00015000519) FKTN (ENSNFUG00015000481) Oryzias ANCESTRAL SPECIES 9 ENSGT00940000155945.i.a ENSGT00940000157955.d.a ENSGT00940000153391.c.b.a.j.b ENSGT00940000157419 ENSGT00940000159990 ENSGT00940000156261 ENSGT01030000234542.b.b.a.a.a.a ENSGT00940000157006 ENSGT00390000006096.a.b ENSGT00940000157207.a.a ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000011873.f ENSGT01030000234614.B.a.a.a.t ENSGT00940000155591.j ENSGT00950000182864.a.b.b.a.a.a ENSGT00390000013415.a.b.jb Oryzias_a ANCESTRAL SPECIES 126 ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a Chinese medaka MODERN SPECIES 343 derl2 (ENSOSIG00000021501) ralgps1 (ENSOSIG00000021166) fbxw2 (ENSOSIG00000021101) ENSOSIG00000021100 uap1l1 (ENSOSIG00000021097) #22 zdhhc12b (ENSOSIG00000021096) ENSOSIG00000017902 setb (ENSOSIG00000017687) Japanese Medaka HdrR MODERN SPECIES 3 ppp2r2ab (ENSORLG00000012297) gsna (ENSORLG00000012347) stom (ENSORLG00000012366) ENSORLG00000024043 ENSORLG00000022101 GTF3C4 (ENSORLG00000012377) skp2 (ENSORLG00000012394) str-3 (ENSORLG00000012407) PPP6C (ENSORLG00000012437) SCAI (ENSORLG00000012465) ENSORLG00000012553 derl2 (ENSORLG00000012591) ralgps1 (ENSORLG00000012614) fbxw2 (ENSORLG00000012631) ENSORLG00000012647 uap1l1 (ENSORLG00000012682) #22 zdhhc12b (ENSORLG00000012692) ENSORLG00000012736 setb (ENSORLG00000012750) dync2i2 (ENSORLG00000012774) ENSORLG00000012823 ENSORLG00000023290 ENSORLG00000029984 ENSORLG00000023857 ODF2 (ENSORLG00000012850) SLC25A25 (ENSORLG00000012877) hmgcs1 (ENSORLG00000012898) tln1 (ENSORLG00000013042) tpm2 (ENSORLG00000013079) DENND1A (ENSORLG00000013124) NEK6 (ENSORLG00000013149) Oryzias_b ANCESTRAL SPECIES 4 ENSGT00940000155945.i.a ENSGT00940000157955.d.a ENSGT00940000153391.c.b.a.j.b ENSGT00940000157419 ENSGT00940000159990 ENSGT00940000156261 ENSGT01030000234542.b.b.a.a.a.a ENSGT00940000157006 ENSGT00390000006096.a.b ENSGT00940000157207.a.a ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000011873.f ENSGT00940000160428.b.b ENSGT01030000234614.B.a.a.a.t ENSGT00940000155591.j ENSGT00950000182864.a.b.b.a.a.a Indian medaka MODERN SPECIES 677 ENSOMEG00000019960 uap1l1 (ENSOMEG00000020003) #22 zdhhc12b (ENSOMEG00000020031) ENSOMEG00000020078 setb (ENSOMEG00000020148) dync2i2 (ENSOMEG00000020274) ENSOMEG00000020320 ENSOMEG00000020337 ENSOMEG00000020347 ENSOMEG00000020367 ODF2 (ENSOMEG00000020421) SCAI (ENSOMEG00000000534) Javanese ricefish MODERN SPECIES 3 lmx1ba (ENSOJAG00000003410) ENSOJAG00000003418 nr5a1b (ENSOJAG00000003424) psmb7 (ENSOJAG00000003441) NEK6 (ENSOJAG00000003578) DENND1A (ENSOJAG00000004452) tpm2 (ENSOJAG00000005132) tln1 (ENSOJAG00000005590) hmgcs1 (ENSOJAG00000007951) slc25a25b (ENSOJAG00000008215) smarcb1b (ENSOJAG00000008974) derl2 (ENSOJAG00000009021) ralgps1 (ENSOJAG00000009088) fbxw2 (ENSOJAG00000009386) ENSOJAG00000009406 uap1l1 (ENSOJAG00000009419) #22 zdhhc12b (ENSOJAG00000009441) ENSOJAG00000009570 setb (ENSOJAG00000010833) dync2i2 (ENSOJAG00000010843) ENSOJAG00000015391 SCAI (ENSOJAG00000015411) ppp6c (ENSOJAG00000015594) MMP11 (ENSOJAG00000015610) skp2 (ENSOJAG00000015640) GTF3C4 (ENSOJAG00000015654) barhl1a (ENSOJAG00000015664) stom (ENSOJAG00000015697) gsna (ENSOJAG00000015905) ppp2r2ab (ENSOJAG00000017346) bnip3lb (ENSOJAG00000018109) Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT01060000248556.A.a.a.a.b.a.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Pomacentridae ANCESTRAL SPECIES 69 ENSGT01060000248556.A.a.a.a.b.a.b.k ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Pomacentridae_A ANCESTRAL SPECIES 46 ENSGT00390000005782 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A ENSGT00550000074872 ENSGT01050000244857.C.b.g ENSGT00940000157703 ENSGT00390000000642 ENSGT01060000248556.A.a.a.a.b.a.b.k ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Amphiprion ANCESTRAL SPECIES 41 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A ENSGT00550000074872 ENSGT01050000244857.C.b.g ENSGT00940000157703 ENSGT00390000000642 ENSGT01060000248556.A.a.a.a.b.a.b.k.a ENSGT01060000248556.A.a.a.a.b.a.b.k.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b.e ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Orange clownfish MODERN SPECIES 7 reep5 (ENSAPEG00000013643) chd1 (ENSAPEG00000013544) syk (ENSAPEG00000013443) auh (ENSAPEG00000013419) nfil3 (ENSAPEG00000013392) ROR2 (ENSAPEG00000013355) sptlc1 (ENSAPEG00000013308) chsy3 (ENSAPEG00000013296) megf10 (ENSAPEG00000013210) MAPKAP1 (ENSAPEG00000013160) crata (ENSAPEG00000012956) crata (ENSAPEG00000012815) derl2 (ENSAPEG00000012753) smarcb1b (ENSAPEG00000012703) slc25a25b (ENSAPEG00000012664) uap1l1 (ENSAPEG00000012589) #22 zdhhc12b (ENSAPEG00000012574) ENSAPEG00000012555 setb (ENSAPEG00000012509) dync2i2 (ENSAPEG00000012474) sptan1 (ENSAPEG00000012321) ODF2 (ENSAPEG00000012298) SCAI (ENSAPEG00000012227) ppp6c (ENSAPEG00000012178) MMP11 (ENSAPEG00000012144) skp2 (ENSAPEG00000012017) nadk2 (ENSAPEG00000011928) slc1a3b (ENSAPEG00000011901) spra (ENSAPEG00000011895) smyd1a (ENSAPEG00000011859) DQX1 (ENSAPEG00000011785) Clown anemonefish MODERN SPECIES 1674 MAPKAP1 (ENSAOCG00000003777) crata (ENSAOCG00000003747) crata (ENSAOCG00000003681) derl2 (ENSAOCG00000003672) smarcb1b (ENSAOCG00000003660) slc25a25b (ENSAOCG00000003646) uap1l1 (ENSAOCG00000022515) #22 ENSAOCG00000022482 zdhhc12b (ENSAOCG00000022466) ENSAOCG00000022439 setb (ENSAOCG00000022410) dync2i2 (ENSAOCG00000022383) sptan1 (ENSAOCG00000022310) ODF2 (ENSAOCG00000022175) SCAI (ENSAOCG00000022088) ppp6c (ENSAOCG00000021985) Spiny chromis MODERN SPECIES 3122 uap1l1 (ENSAPOG00000008661) #22 ENSAPOG00000000223 Bicolor damselfish MODERN SPECIES 538 ENSSPAG00000004651 ablim3 (ENSSPAG00000004625) ENSSPAG00000004388 ENSSPAG00000004340 ENSSPAG00000004302 rfc2 (ENSSPAG00000004272) USP11 (ENSSPAG00000004185) ENSSPAG00000004154 ENSSPAG00000004120 IQSEC2 (ENSSPAG00000004074) crata (ENSSPAG00000003694) derl2 (ENSSPAG00000003626) smarcb1b (ENSSPAG00000003595) ENSSPAG00000003579 ENSSPAG00000003548 uap1l1 (ENSSPAG00000003523) #22 Cichlidae ANCESTRAL SPECIES 98 ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 Pseudocrenilabrinae ANCESTRAL SPECIES 24 ENSGT00940000166544.a ENSGT00950000183041.C ENSGT00940000154856.B.c ENSGT00940000155657 ENSGT00410000025802 ENSGT00390000003837 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d ENSGT00390000000642 ENSGT00940000155945.i.a ENSGT00940000157955.d.a ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000157703 ENSGT01050000244857.C.b ENSGT00550000074872 ENSGT00940000153947.A Pseudocrenilabrinae_A ANCESTRAL SPECIES 34 ENSGT00940000166544.a ENSGT00950000183041.C ENSGT00940000154856.B.c ENSGT00940000155657 ENSGT00410000025802 ENSGT00390000003837 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d ENSGT00390000000642 ENSGT00940000155945.i.a ENSGT00940000157955.d.a ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000157703 ENSGT01050000244857.C.b ENSGT00550000074872 ENSGT00940000153947.A Haplochromini ANCESTRAL SPECIES 40 ENSGT00940000166544.a ENSGT00950000183041.C ENSGT00940000154856.B.c ENSGT00940000155657 ENSGT00410000025802 ENSGT00390000003837 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d ENSGT00390000000642 ENSGT00940000155945.i.a ENSGT00940000157955.d.a ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000157703 ENSGT01050000244857.C.b ENSGT00550000074872 ENSGT00940000153947.A.i.b Burton s mouthbrooder MODERN SPECIES 371 vcanb (ENSHBUG00000000730) xrcc4 (ENSHBUG00000001108) zcchc9 (ENSHBUG00000007612) ENSHBUG00000007447 wdr45 (ENSHBUG00000007433) ENSHBUG00000007395 prrc1 (ENSHBUG00000007388) slc27a6 (ENSHBUG00000007344) slc12a2 (ENSHBUG00000000179) ENSHBUG00000007147 ENSHBUG00000007140 MAPKAP1 (ENSHBUG00000007136) mvb12ba (ENSHBUG00000000174) lmx1ba (ENSHBUG00000007069) slc25a25b (ENSHBUG00000007042) uap1l1 (ENSHBUG00000006938) #22 ENSHBUG00000006964 zdhhc12b (ENSHBUG00000006929) setb (ENSHBUG00000006916) dync2i2 (ENSHBUG00000006874) sptan1 (ENSHBUG00000006842) ODF2 (ENSHBUG00000006753) SCAI (ENSHBUG00000006704) ppp6c (ENSHBUG00000006644) ENSHBUG00000006617 skp2 (ENSHBUG00000006588) nadk2 (ENSHBUG00000006565) megf10 (ENSHBUG00000006507) chsy3 (ENSHBUG00000006410) sptlc1 (ENSHBUG00000006377) ENSHBUG00000006311 Haplochromini_A ANCESTRAL SPECIES 25 ENSGT00940000166544.a ENSGT00950000183041.C ENSGT00940000154856.B.c ENSGT00940000155657 ENSGT00410000025802 ENSGT00390000003837 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d ENSGT00390000000642 ENSGT00940000155945.i.a ENSGT00940000157955.d.a ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000157703 ENSGT01050000244857.C.b ENSGT00550000074872 ENSGT00940000153947.A.i.b P. nyererei MODERN SPECIES 629 AJM1 (ENSPNYG00000023521) MAPKAP1 (ENSPNYG00000023522) mvb12ba (ENSPNYG00000023524) lmx1ba (ENSPNYG00000023527) ENSPNYG00000023531 slc25a25b (ENSPNYG00000023533) uap1l1 (ENSPNYG00000023536) #22 zdhhc12b (ENSPNYG00000023539) ENSPNYG00000023541 setb (ENSPNYG00000023543) dync2i2 (ENSPNYG00000023548) sptan1 (ENSPNYG00000023554) ODF2 (ENSPNYG00000023558) SCAI (ENSPNYG00000023559) ppp6c (ENSPNYG00000023561) MMP11 (ENSPNYG00000023563) skp2 (ENSPNYG00000023565) nadk2 (ENSPNYG00000023568) megf10 (ENSPNYG00000023573) chsy3 (ENSPNYG00000023578) sptlc1 (ENSPNYG00000023581) ENSPNYG00000023583 Haplochromini_B ANCESTRAL SPECIES 30 ENSGT00940000166544.a ENSGT00950000183041.C ENSGT00940000154856.B.c ENSGT00940000155657 ENSGT00410000025802 ENSGT00390000003837 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d ENSGT00390000000642 ENSGT00940000155945.i.a ENSGT00940000157955.d.a ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000157703 ENSGT01050000244857.C.b ENSGT00550000074872 ENSGT00940000153947.A.i.b Eastern happy MODERN SPECIES 19 xrcc4 (ENSACLG00000009039) zcchc9 (ENSACLG00000009042) ENSACLG00000009062 wdr45 (ENSACLG00000009075) ENSACLG00000009129 prrc1 (ENSACLG00000009140) ENSACLG00000009180 slc27a6 (ENSACLG00000009188) slc12a2 (ENSACLG00000009245) ENSACLG00000009572 ENSACLG00000009576 MAPKAP1 (ENSACLG00000010709) mvb12ba (ENSACLG00000010732) lmx1ba (ENSACLG00000010749) slc25a25b (ENSACLG00000010882) uap1l1 (ENSACLG00000010989) #22 zdhhc12b (ENSACLG00000011023) ENSACLG00000011039 setb (ENSACLG00000011081) dync2i2 (ENSACLG00000011111) sptan1 (ENSACLG00000011141) ODF2 (ENSACLG00000011802) SCAI (ENSACLG00000011846) ppp6c (ENSACLG00000011968) MMP11 (ENSACLG00000012009) skp2 (ENSACLG00000012087) nadk2 (ENSACLG00000012117) megf10 (ENSACLG00000012182) chsy3 (ENSACLG00000012339) sptlc1 (ENSACLG00000012367) ENSACLG00000012407 Lyretail cichlid MODERN SPECIES 339 ENSNBRG00000005187 zcchc9 (ENSNBRG00000005258) ENSNBRG00000005329 wdr45 (ENSNBRG00000005357) ENSNBRG00000005392 prrc1 (ENSNBRG00000005405) slc27a6 (ENSNBRG00000005438) slc12a2 (ENSNBRG00000005525) ENSNBRG00000005591 AJM1 (ENSNBRG00000005613) MAPKAP1 (ENSNBRG00000005632) mvb12ba (ENSNBRG00000005661) lmx1ba (ENSNBRG00000005716) ENSNBRG00000005726 slc25a25b (ENSNBRG00000005737) uap1l1 (ENSNBRG00000005773) #22 zdhhc12b (ENSNBRG00000005893) ENSNBRG00000005923 setb (ENSNBRG00000005989) dync2i2 (ENSNBRG00000006020) ENSNBRG00000006052 ENSNBRG00000006065 ENSNBRG00000006072 ODF2 (ENSNBRG00000006082) SCAI (ENSNBRG00000006140) ppp6c (ENSNBRG00000006193) MMP11 (ENSNBRG00000006233) skp2 (ENSNBRG00000006265) nadk2 (ENSNBRG00000006379) megf10 (ENSNBRG00000006568) chsy3 (ENSNBRG00000006648) Nile tilapia MODERN SPECIES 19 ENSONIG00000011363 prrc1 (ENSONIG00000011358) slc27a6 (ENSONIG00000011351) slc12a2 (ENSONIG00000011322) ENSONIG00000027177 ENSONIG00000017491 pomk (ENSONIG00000017496) ENSONIG00000040459 ENSONIG00000032452 PAM (ENSONIG00000017497) AJM1 (ENSONIG00000031602) MAPKAP1 (ENSONIG00000011314) mvb12ba (ENSONIG00000011310) lmx1ba (ENSONIG00000011305) slc25a25b (ENSONIG00000011301) uap1l1 (ENSONIG00000011298) #22 zdhhc12 (ENSONIG00000027386) ENSONIG00000011289 setb (ENSONIG00000011282) dync2i2 (ENSONIG00000011279) sptan1 (ENSONIG00000011270) ODF2 (ENSONIG00000011262) SCAI (ENSONIG00000011257) ppp6c (ENSONIG00000037191) MMP11 (ENSONIG00000011252) skp2 (ENSONIG00000011248) nadk2 (ENSONIG00000011244) megf10 (ENSONIG00000011235) chsy3 (ENSONIG00000011233) sptlc1 (ENSONIG00000011229) ROR2 (ENSONIG00000011228) Midas cichlid MODERN SPECIES 1323 slc25a25b (ENSACIG00000002733) uap1l1 (ENSACIG00000002770) #22 zdhhc12b (ENSACIG00000002790) ENSACIG00000002821 setb (ENSACIG00000002868) dync2i2 (ENSACIG00000002888) sptan1 (ENSACIG00000002938) ODF2 (ENSACIG00000003059) SCAI (ENSACIG00000003105) ppp6c (ENSACIG00000003144) MMP11 (ENSACIG00000003165) skp2 (ENSACIG00000003189) Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Eupercaria ANCESTRAL SPECIES 13 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Tetraodontidae ANCESTRAL SPECIES 88 ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000157419 ENSGT00940000156261 ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000154079.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c Fugu MODERN SPECIES 18 sptlc1 (ENSTRUG00000012471) mvb12ba (ENSTRUG00000012699) zer1 (ENSTRUG00000012793) TBC1D13 (ENSTRUG00000012856) DQX1 (ENSTRUG00000012911) smyd1a (ENSTRUG00000013032) spra (ENSTRUG00000013101) slc1a3b (ENSTRUG00000013124) skp2 (ENSTRUG00000021483) sh3glb2b (ENSTRUG00000013419) ENSTRUG00000027632 ENSTRUG00000030413 dpm2 (ENSTRUG00000013567) naif1 (ENSTRUG00000013589) slc25a25b (ENSTRUG00000013603) uap1l1 (ENSTRUG00000013698) #22 zdhhc12b (ENSTRUG00000013790) ENSTRUG00000013819 setb (ENSTRUG00000013980) dync2i2 (ENSTRUG00000014025) sptan1 (ENSTRUG00000014072) SCAI (ENSTRUG00000014341) ppp6c (ENSTRUG00000014295) psmb7 (ENSTRUG00000014190) phyhd1 (ENSTRUG00000031352) DENND1A (ENSTRUG00000014090) ENSTRUG00000014027 fbxw2 (ENSTRUG00000013978) ralgps1 (ENSTRUG00000013875) derl2 (ENSTRUG00000024229) SMARCB1 (ENSTRUG00000013792) Tetraodon MODERN SPECIES 26 bfsp2 (ENSTNIG00000003071) ccr9a (ENSTNIG00000003072) ENSTNIG00000003073 opn4.1 (ENSTNIG00000003074) ENSTNIG00000003075 CDY1 (ENSTNIG00000003076) rpp40 (ENSTNIG00000003077) riok1 (ENSTNIG00000003078) ENSTNIG00000000713 impa1 (ENSTNIG00000003079) ENSTNIG00000003080 ENSTNIG00000000735 zgc:55781 (ENSTNIG00000001323) tmub1 (ENSTNIG00000003081) ENSTNIG00000002343 uap1l1 (ENSTNIG00000003082) #22 zdhhc12b (ENSTNIG00000002180) ENSTNIG00000003083 pofut1 (ENSTNIG00000003103) KIF1C (ENSTNIG00000003106) PCMTD2 (ENSTNIG00000003104) MYT1 (ENSTNIG00000003105) ENSTNIG00000000168 ENSTNIG00000003107 ENSTNIG00000000254 ENSTNIG00000003108 ENSTNIG00000003109 fgb (ENSTNIG00000003110) ENSTNIG00000003111 CNGA1 (ENSTNIG00000003112) ENSTNIG00000000336 Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Ballan wrasse MODERN SPECIES 140 slc1a3b (ENSLBEG00000020724) SPR (ENSLBEG00000020615) spra (ENSLBEG00000020590) smyd1a (ENSLBEG00000020550) DQX1 (ENSLBEG00000020503) thnsl2 (ENSLBEG00000020440) TBC1D13 (ENSLBEG00000020403) zer1 (ENSLBEG00000020358) sh3glb2b (ENSLBEG00000020325) PIP5KL1 (ENSLBEG00000020240) dpm2 (ENSLBEG00000020174) eeig1b (ENSLBEG00000020139) naif1 (ENSLBEG00000020119) ENSLBEG00000020105 slc25a25b (ENSLBEG00000020076) uap1l1 (ENSLBEG00000020043) #22 zdhhc12b (ENSLBEG00000019981) ENSLBEG00000019912 setb (ENSLBEG00000019863) dync2i2 (ENSLBEG00000019826) sptan1 (ENSLBEG00000019669) ODF2 (ENSLBEG00000019603) SCAI (ENSLBEG00000019544) ppp6c (ENSLBEG00000019494) MMP11 (ENSLBEG00000019474) smarcb1b (ENSLBEG00000019421) derl2 (ENSLBEG00000019394) Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Perciformes ANCESTRAL SPECIES 32 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a Cottioidei ANCESTRAL SPECIES 31 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00530000064469 ENSGT00390000005782 ENSGT00390000004945 ENSGT00940000156369 Lumpfish MODERN SPECIES 3 fpgs (ENSCLMG00005013201) skp2 (ENSCLMG00005013187) nadk2 (ENSCLMG00005013184) slc1a3b (ENSCLMG00005013183) spra (ENSCLMG00005013182) smyd1a (ENSCLMG00005013180) DQX1 (ENSCLMG00005013177) thnsl2 (ENSCLMG00005013174) TBC1D13 (ENSCLMG00005013171) zer1 (ENSCLMG00005013170) sh3glb2b (ENSCLMG00005013145) PIP5KL1 (ENSCLMG00005013144) dpm2 (ENSCLMG00005013143) naif1 (ENSCLMG00005013142) slc25a25b (ENSCLMG00005012030) uap1l1 (ENSCLMG00005012007) #22 zdhhc12b (ENSCLMG00005012004) ENSCLMG00005006823 setb (ENSCLMG00005006788) dync2i2 (ENSCLMG00005006786) sptan1 (ENSCLMG00005005989) ENSCLMG00005005970 ENSCLMG00005005969 ODF2 (ENSCLMG00005005664) SCAI (ENSCLMG00005005420) PPP6C (ENSCLMG00005005416) MMP11 (ENSCLMG00005005414) PAM (ENSCLMG00005004210) pomk (ENSCLMG00005004207) macir (ENSCLMG00005004206) ENSCLMG00005004205 Stickleback MODERN SPECIES 13 skp2 (ENSGACG00000018512) nadk2 (ENSGACG00000018510) slc1a3b (ENSGACG00000018505) spra (ENSGACG00000018502) ENSGACG00000018499 DQX1 (ENSGACG00000018495) thnsl2 (ENSGACG00000018492) TBC1D13 (ENSGACG00000018486) zer1 (ENSGACG00000018482) sh3glb2b (ENSGACG00000018470) PIP5KL1 (ENSGACG00000018468) dpm2 (ENSGACG00000018462) eeig1b (ENSGACG00000018460) naif1 (ENSGACG00000018458) slc25a25b (ENSGACG00000018446) uap1l1 (ENSGACG00000018441) #22 zdhhc12b (ENSGACG00000018437) ENSGACG00000018428 setb (ENSGACG00000018427) dync2i2 (ENSGACG00000018424) ENSGACG00000018423 sptan1 (ENSGACG00000018404) ODF2 (ENSGACG00000018403) SCAI (ENSGACG00000018402) ppp6c (ENSGACG00000018399) MMP11 (ENSGACG00000018397) smarcb1b (ENSGACG00000018395) derl2 (ENSGACG00000018394) ENSGACG00000018393 ENSGACG00000018388 macir (ENSGACG00000018385) Perciformes_a ANCESTRAL SPECIES 12 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a Pike perch MODERN SPECIES 72 nadk2 (ENSSLUG00000020541) slc1a3b (ENSSLUG00000020645) spra (ENSSLUG00000020673) smyd1a (ENSSLUG00000020688) DQX1 (ENSSLUG00000020733) thnsl2 (ENSSLUG00000020748) TBC1D13 (ENSSLUG00000020760) zer1 (ENSSLUG00000020829) SH3GLB2 (ENSSLUG00000020861) ENSSLUG00000020886 PIP5KL1 (ENSSLUG00000020888) dpm2 (ENSSLUG00000020891) eeig1b (ENSSLUG00000020896) naif1 (ENSSLUG00000020899) slc25a25b (ENSSLUG00000020955) uap1l1 (ENSSLUG00000021860) #22 zdhhc12b (ENSSLUG00000021865) ENSSLUG00000001849 setb (ENSSLUG00000002592) dync2i2 (ENSSLUG00000002600) sptan1 (ENSSLUG00000002800) ODF2 (ENSSLUG00000006042) derl2 (ENSSLUG00000006051) SMARCB1 (ENSSLUG00000006060) ppp6c (ENSSLUG00000006082) SCAI (ENSSLUG00000006150) PAM (ENSSLUG00000006851) pomk (ENSSLUG00000007790) Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000155946.c.b ENSGT00940000154079.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 3 smyd1a (ENSSAUG00010024497) DQX1 (ENSSAUG00010024484) thnsl2 (ENSSAUG00010024480) TBC1D13 (ENSSAUG00010024460) zer1 (ENSSAUG00010024446) sh3glb2b (ENSSAUG00010024434) ENSSAUG00010024432 PIP5KL1 (ENSSAUG00010024431) dpm2 (ENSSAUG00010024430) eeig1b (ENSSAUG00010024428) naif1 (ENSSAUG00010024427) ENSSAUG00010024426 slc25a25b (ENSSAUG00010024395) uap1l1 (ENSSAUG00010024391) #22 slc25a25b (ENSSAUG00010024388) uap1l1 (ENSSAUG00010024386) #22 zdhhc12b (ENSSAUG00010024384) ENSSAUG00010022795 setb (ENSSAUG00010022693) dync2i2 (ENSSAUG00010022677) sptan1 (ENSSAUG00010022637) ODF2 (ENSSAUG00010022606) SCAI (ENSSAUG00010022449) ppp6c (ENSSAUG00010022438) MMP11 (ENSSAUG00010022437) smarcb1b (ENSSAUG00010022435) derl2 (ENSSAUG00010022432) ENSSAUG00010021889 ENSSAUG00010021852 ralgps1 (ENSSAUG00010021810) fbxw2 (ENSSAUG00010021793) Gilthead seabream MODERN SPECIES 3 slc1a3b (ENSSAUG00010024506) spra (ENSSAUG00010024499) smyd1a (ENSSAUG00010024497) DQX1 (ENSSAUG00010024484) thnsl2 (ENSSAUG00010024480) TBC1D13 (ENSSAUG00010024460) zer1 (ENSSAUG00010024446) sh3glb2b (ENSSAUG00010024434) ENSSAUG00010024432 PIP5KL1 (ENSSAUG00010024431) dpm2 (ENSSAUG00010024430) eeig1b (ENSSAUG00010024428) naif1 (ENSSAUG00010024427) ENSSAUG00010024426 slc25a25b (ENSSAUG00010024395) uap1l1 (ENSSAUG00010024391) #22 slc25a25b (ENSSAUG00010024388) uap1l1 (ENSSAUG00010024386) #22 zdhhc12b (ENSSAUG00010024384) ENSSAUG00010022795 setb (ENSSAUG00010022693) dync2i2 (ENSSAUG00010022677) sptan1 (ENSSAUG00010022637) ODF2 (ENSSAUG00010022606) SCAI (ENSSAUG00010022449) ppp6c (ENSSAUG00010022438) MMP11 (ENSSAUG00010022437) smarcb1b (ENSSAUG00010022435) derl2 (ENSSAUG00010022432) ENSSAUG00010021889 ENSSAUG00010021852 Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000155946.c.b ENSGT00940000154079.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Large yellow croaker MODERN SPECIES ENSLCRG00005007324 ENSLCRG00005007323 ENSLCRG00005007322 nifk (ENSLCRG00005007317) clasp1a (ENSLCRG00005003217) tfcp2l1 (ENSLCRG00005002060) ENSLCRG00005002008 ENSLCRG00005001637 inhbb (ENSLCRG00005001583) ENSLCRG00005001566 slc10a2 (ENSLCRG00005001550) gtpbp8 (ENSLCRG00005001536) ENSLCRG00005001521 efnb2a (ENSLCRG00005001511) arglu1a (ENSLCRG00005001497) uap1l1 (ENSLCRG00005001461) #22 zdhhc12b (ENSLCRG00005023435) ENSLCRG00005023415 setb (ENSLCRG00005023412) dync2i2 (ENSLCRG00005023410) sptan1 (ENSLCRG00005023399) ODF2 (ENSLCRG00005023382) SCAI (ENSLCRG00005023378) ppp6c (ENSLCRG00005023374) MMP11 (ENSLCRG00005023372) smarcb1b (ENSLCRG00005023360) derl2 (ENSLCRG00005023358) ENSLCRG00005023345 angptl2a (ENSLCRG00005023341) ralgps1 (ENSLCRG00005023340) fbxw2 (ENSLCRG00005023339) European seabass MODERN SPECIES 9 ENSDLAG00005029405 SLC1A3 (ENSDLAG00005013579) ENSDLAG00005028733 ENSDLAG00005013882 ENSDLAG00005013885 ENSDLAG00005014014 ENSDLAG00005014084 ENSDLAG00005014089 ENSDLAG00005014115 ENSDLAG00005014170 PIP5KL1 (ENSDLAG00005028420) dpm2 (ENSDLAG00005029824) eeig1b (ENSDLAG00005014575) NAIF1 (ENSDLAG00005027321) slc25a25b (ENSDLAG00005030118) uap1l1 (ENSDLAG00005004297) #22 zdhhc12b (ENSDLAG00005004355) ENSDLAG00005004547 setb (ENSDLAG00005010991) dync2i2 (ENSDLAG00005033129) sptan1 (ENSDLAG00005007570) ODF2 (ENSDLAG00005009791) ENSDLAG00005009820 ENSDLAG00005031144 ENSDLAG00005009963 ENSDLAG00005010024 ENSDLAG00005010086 ENSDLAG00005011315 ENSDLAG00005011403 ENSDLAG00005011408 ENSDLAG00005011480 Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Anabantaria ANCESTRAL SPECIES 12 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Zig-zag eel MODERN SPECIES 3 ENSMAMG00000022619 SLC1A3 (ENSMAMG00000022626) ENSMAMG00000022629 ENSMAMG00000022631 ENSMAMG00000022633 ENSMAMG00000022638 ENSMAMG00000022639 ENSMAMG00000022644 ENSMAMG00000022645 ENSMAMG00000022646 PIP5KL1 (ENSMAMG00000022647) dpm2 (ENSMAMG00000022648) eeig1b (ENSMAMG00000022649) NAIF1 (ENSMAMG00000024944) slc25a25b (ENSMAMG00000022651) uap1l1 (ENSMAMG00000022652) #22 ENSMAMG00000022654 setb (ENSMAMG00000022655) dync2i2 (ENSMAMG00000022658) sptan1 (ENSMAMG00000022659) ODF2 (ENSMAMG00000022664) ENSMAMG00000022666 ENSMAMG00000022668 ENSMAMG00000022669 ENSMAMG00000022671 ENSMAMG00000022672 ENSMAMG00000022674 ENSMAMG00000024754 ENSMAMG00000022679 ENSMAMG00000022682 CRB2 (ENSMAMG00000022685) Anabantoidei ANCESTRAL SPECIES 32 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000157199 ENSGT00940000154412.A ENSGT00390000003837 ENSGT00940000161073 Siamese fighting fish MODERN SPECIES 3 macir (ENSBSLG00000004788) skp2 (ENSBSLG00000004815) nadk2 (ENSBSLG00000004864) slc1a3b (ENSBSLG00000004994) SPR (ENSBSLG00000005403) smyd1a (ENSBSLG00000005418) DQX1 (ENSBSLG00000005461) thnsl2 (ENSBSLG00000005584) TBC1D13 (ENSBSLG00000005628) zer1 (ENSBSLG00000005752) SH3GLB2 (ENSBSLG00000005922) PIP5KL1 (ENSBSLG00000005983) dpm2 (ENSBSLG00000005988) naif1 (ENSBSLG00000005992) slc25a25b (ENSBSLG00000006008) uap1l1 (ENSBSLG00000006347) #22 zdhhc12b (ENSBSLG00000006393) ENSBSLG00000006801 setb (ENSBSLG00000007574) dync2i2 (ENSBSLG00000007585) SCAI (ENSBSLG00000007810) ENSBSLG00000008025 BRCC3 (ENSBSLG00000008033) RAB27B (ENSBSLG00000008042) TCF4 (ENSBSLG00000008105) ENSBSLG00000009210 ENSBSLG00000009217 ENSBSLG00000009220 ENSBSLG00000009233 ENSBSLG00000009240 ENSBSLG00000009247 Climbing perch MODERN SPECIES 13 ENSATEG00000009252 SLC1A3 (ENSATEG00000009294) ENSATEG00000009318 ENSATEG00000009333 ENSATEG00000009375 ENSATEG00000009386 TBC1D13 (ENSATEG00000009405) ENSATEG00000009465 ENSATEG00000009529 ENSATEG00000027150 PIP5KL1 (ENSATEG00000009568) dpm2 (ENSATEG00000025188) eeig1b (ENSATEG00000009622) NAIF1 (ENSATEG00000009671) slc25a25b (ENSATEG00000028871) uap1l1 (ENSATEG00000009749) #22 zdhhc12b (ENSATEG00000029454) ENSATEG00000009853 setb (ENSATEG00000009873) dync2i2 (ENSATEG00000009904) sptan1 (ENSATEG00000009938) ODF2 (ENSATEG00000010104) ENSATEG00000010138 ENSATEG00000010188 ENSATEG00000025171 ENSATEG00000010245 ENSATEG00000028789 ENSATEG00000010319 CTXN3 (ENSATEG00000010357) ENSATEG00000010370 ENSATEG00000010405 Carangaria ANCESTRAL SPECIES 17 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000155946.c.b ENSGT00940000154079.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000177772 ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009948.d ENSGT00940000154314.a ENSGT00940000155860.b ENSGT00390000005989.b.b ENSGT00940000154704.c.c ENSGT00410000025802 ENSGT00940000155657 ENSGT00940000161915.b ENSGT00940000156732.a.a Tongue sole MODERN SPECIES 5 ENSCSEG00000018702 PURG (ENSCSEG00000018750) slc38a9 (ENSCSEG00000018757) nrg1 (ENSCSEG00000018793) thnsl2 (ENSCSEG00000018800) TBC1D13 (ENSCSEG00000018804) zer1 (ENSCSEG00000018807) SH3GLB2 (ENSCSEG00000018823) PIP5KL1 (ENSCSEG00000018827) dpm2 (ENSCSEG00000018834) eeig1b (ENSCSEG00000018847) naif1 (ENSCSEG00000018859) ENSCSEG00000018864 slc25a25b (ENSCSEG00000018870) ENSCSEG00000018876 uap1l1 (ENSCSEG00000018880) #22 zdhhc12b (ENSCSEG00000018890) ENSCSEG00000018901 ENSCSEG00000018914 setb (ENSCSEG00000018916) DQX1 (ENSCSEG00000018927) smyd1a (ENSCSEG00000018953) spra (ENSCSEG00000018960) slc1a3b (ENSCSEG00000018965) nadk2 (ENSCSEG00000018982) skp2 (ENSCSEG00000018994) ENSCSEG00000019026 ENSCSEG00000019051 macir (ENSCSEG00000019056) phpt1 (ENSCSEG00000019061) ENSCSEG00000019065 Turbot MODERN SPECIES 7 ENSSMAG00000010679 SLC1A3 (ENSSMAG00000010635) ENSSMAG00000010630 ENSSMAG00000010620 ENSSMAG00000010612 ENSSMAG00000010595 ENSSMAG00000010558 ENSSMAG00000010520 ENSSMAG00000010445 ENSSMAG00000010377 PIP5KL1 (ENSSMAG00000010364) dpm2 (ENSSMAG00000031774) eeig1b (ENSSMAG00000010278) NAIF1 (ENSSMAG00000010261) slc25a25b (ENSSMAG00000010217) uap1l1 (ENSSMAG00000010208) #22 zdhhc12b (ENSSMAG00000010199) ENSSMAG00000010189 SET (ENSSMAG00000010018) dync2i2 (ENSSMAG00000010007) SPTAN1 (ENSSMAG00000009496) ODF2 (ENSSMAG00000009452) ENSSMAG00000009433 kctd9b (ENSSMAG00000009386) ENSSMAG00000028483 ENSSMAG00000009342 stc1l (ENSSMAG00000009300) ENSSMAG00000009265 ENSSMAG00000034455 wdr45 (ENSSMAG00000009227) ENSSMAG00000009215 Carangaria_A ANCESTRAL SPECIES 43 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000155946.c.b ENSGT00940000154079.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Barramundi perch MODERN SPECIES 228 zer1 (ENSLCAG00010011470) TBC1D13 (ENSLCAG00010011679) thnsl2 (ENSLCAG00010011728) DQX1 (ENSLCAG00010011740) macir (ENSLCAG00010011742) cdk9 (ENSLCAG00010011745) sptlc1 (ENSLCAG00010011757) ROR2 (ENSLCAG00010011848) ENSLCAG00010011858 nfil3 (ENSLCAG00010011862) auh (ENSLCAG00010011865) syk (ENSLCAG00010011881) chd1 (ENSLCAG00010012142) reep5 (ENSLCAG00010013112) slc25a25b (ENSLCAG00010013135) uap1l1 (ENSLCAG00010013191) #22 zdhhc12b (ENSLCAG00010013195) ENSLCAG00010013196 setb (ENSLCAG00010013204) dync2i2 (ENSLCAG00010013209) sptan1 (ENSLCAG00010013217) ENSLCAG00010013235 ODF2 (ENSLCAG00010013237) SCAI (ENSLCAG00010013254) ppp6c (ENSLCAG00010013388) MMP11 (ENSLCAG00010013394) smarcb1b (ENSLCAG00010013407) derl2 (ENSLCAG00010013425) ENSLCAG00010013447 ralgps1 (ENSLCAG00010013452) angptl2a (ENSLCAG00010013457) Seriola ANCESTRAL SPECIES 33 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00940000157207.a.a ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000153877.a.a.b ENSGT00940000158483 ENSGT00940000156662.d.f ENSGT00530000063497.a.a ENSGT00390000009566 ENSGT00550000074961.b ENSGT00940000156340.a.d ENSGT00440000038585.c ENSGT00530000063156.a.a.a ENSGT00940000155946.c.b ENSGT00940000154079.b ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b Greater amberjack MODERN SPECIES 34 nadk2 (ENSSDUG00000020851) slc1a3b (ENSSDUG00000020831) spra (ENSSDUG00000020820) SPR (ENSSDUG00000020797) smyd1a (ENSSDUG00000020775) DQX1 (ENSSDUG00000020759) thnsl2 (ENSSDUG00000020743) TBC1D13 (ENSSDUG00000020716) zer1 (ENSSDUG00000020653) sh3glb2b (ENSSDUG00000020624) ENSSDUG00000020616 PIP5KL1 (ENSSDUG00000020594) dpm2 (ENSSDUG00000020574) eeig1b (ENSSDUG00000020536) naif1 (ENSSDUG00000020525) uap1l1 (ENSSDUG00000020442) #22 zdhhc12b (ENSSDUG00000020411) ENSSDUG00000020309 setb (ENSSDUG00000020263) dync2i2 (ENSSDUG00000020218) sptan1 (ENSSDUG00000020131) ODF2 (ENSSDUG00000020101) SCAI (ENSSDUG00000020037) ppp6c (ENSSDUG00000020000) MMP11 (ENSSDUG00000019979) smarcb1b (ENSSDUG00000019943) derl2 (ENSSDUG00000019927) ENSSDUG00000019917 ENSSDUG00000019909 angptl2a (ENSSDUG00000019900) ralgps1 (ENSSDUG00000019795) Yellowtail amberjack MODERN SPECIES 3288 skp2 (ENSSLDG00000022852) nadk2 (ENSSLDG00000022818) slc1a3b (ENSSLDG00000022764) spra (ENSSLDG00000022750) smyd1a (ENSSLDG00000022726) DQX1 (ENSSLDG00000022712) thnsl2 (ENSSLDG00000022667) TBC1D13 (ENSSLDG00000022620) zer1 (ENSSLDG00000022562) sh3glb2b (ENSSLDG00000022495) PIP5KL1 (ENSSLDG00000022435) dpm2 (ENSSLDG00000022422) eeig1b (ENSSLDG00000022396) naif1 (ENSSLDG00000022387) slc25a25b (ENSSLDG00000022345) uap1l1 (ENSSLDG00000022312) #22 zdhhc12b (ENSSLDG00000022302) ENSSLDG00000022274 setb (ENSSLDG00000022255) dync2i2 (ENSSLDG00000022199) sptan1 (ENSSLDG00000022130) ODF2 (ENSSLDG00000022094) SCAI (ENSSLDG00000022050) ppp6c (ENSSLDG00000022033) MMP11 (ENSSLDG00000022020) smarcb1b (ENSSLDG00000021986) derl2 (ENSSLDG00000021972) ENSSLDG00000021963 ENSSLDG00000021951 angptl2a (ENSSLDG00000021944) ralgps1 (ENSSLDG00000021826) Pinecone sodierfish MODERN SPECIES 3 skp2 (ENSMMDG00005001483) nadk2 (ENSMMDG00005001427) slc1a3b (ENSMMDG00005001407) spra (ENSMMDG00005001403) smyd1a (ENSMMDG00005001394) DQX1 (ENSMMDG00005001377) thnsl2 (ENSMMDG00005001365) TBC1D13 (ENSMMDG00005001336) zer1 (ENSMMDG00005001304) sh3glb2b (ENSMMDG00005001246) PIP5KL1 (ENSMMDG00005001215) dpm2 (ENSMMDG00005001197) eeig1b (ENSMMDG00005025047) naif1 (ENSMMDG00005025046) slc25a25b (ENSMMDG00005025045) uap1l1 (ENSMMDG00005025044) #22 zdhhc12b (ENSMMDG00005025043) ENSMMDG00005024910 setb (ENSMMDG00005024909) dync2i2 (ENSMMDG00005024903) sptan1 (ENSMMDG00005024759) ODF2 (ENSMMDG00005024754) SCAI (ENSMMDG00005024753) ppp6c (ENSMMDG00005024752) ENSMMDG00005024751 smarcb1b (ENSMMDG00005024750) derl2 (ENSMMDG00005024749) ENSMMDG00005024748 ENSMMDG00005024747 cfap53 (ENSMMDG00005024746) myo5b (ENSMMDG00005023295) Cod MODERN SPECIES 17 ENSGMOG00000009024 SKP2 (ENSGMOG00000009001) ENSGMOG00000008985 SLC1A3 (ENSGMOG00000008977) ENSGMOG00000008971 ENSGMOG00000025503 ENSGMOG00000008923 ENSGMOG00000008912 ENSGMOG00000008899 ENSGMOG00000008881 ENSGMOG00000008863 PIP5KL1 (ENSGMOG00000008847) dpm2 (ENSGMOG00000023612) NAIF1 (ENSGMOG00000008831) slc25a25b (ENSGMOG00000008812) uap1l1 (ENSGMOG00000008793) #22 zdhhc12b (ENSGMOG00000008781) ENSGMOG00000008752 ENSGMOG00000008739 dync2i2 (ENSGMOG00000008718) SPTAN1 (ENSGMOG00000008663) ODF2 (ENSGMOG00000008644) ENSGMOG00000008631 ENSGMOG00000008624 ENSGMOG00000008614 ENSGMOG00000008607 ENSGMOG00000006711 ENSGMOG00000006730 CRB2 (ENSGMOG00000006738) ENSGMOG00000006766 PSMB7 (ENSGMOG00000006798) Protacanthopterygii ANCESTRAL SPECIES 17 ENSGT00940000158674 ENSGT00940000177481 ENSGT00940000153181 ENSGT00440000038585.d ENSGT00530000063156.a.a.b ENSGT00940000156340.a.c ENSGT00440000038585.c.c ENSGT00940000156340.a.d ENSGT00940000161345 ENSGT00940000166931 ENSGT00940000178900 ENSGT00530000063497.a.a ENSGT00940000156662.d ENSGT00940000158483 ENSGT00940000153877.a.a.b ENSGT00940000153464.A.a #22 ENSGT00940000156902.b ENSGT00940000164790.a ENSGT00940000157207.a.a ENSGT00450000040324.b ENSGT00940000156811.b ENSGT00390000001098 ENSGT00940000158633.a ENSGT00940000155841.c.b ENSGT00940000165164.f ENSGT00950000183190.a.b.b ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 Salmoninae ANCESTRAL SPECIES 134 ENSGT00390000009566.g ENSGT00550000074961.b.d ENSGT00390000000224.j ENSGT00530000063187.A.h ENSGT00940000158674.h ENSGT00940000153181.m.a ENSGT00440000038585.c.c ENSGT00940000156340.a.d.c ENSGT00940000161345.c ENSGT00940000166931.f ENSGT00940000178900 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a #22 Huchen MODERN SPECIES 847 p2rx4a (ENSHHUG00000049607) ENSHHUG00000049667 PTGES2 (ENSHHUG00000049673) zer1 (ENSHHUG00000049684) TBC1D13 (ENSHHUG00000049778) RALGDS (ENSHHUG00000049819) smarcb1b (ENSHHUG00000049941) ENSHHUG00000050319 chchd10 (ENSHHUG00000050323) ddt (ENSHHUG00000050326) ENSHHUG00000050330 ODF2 (ENSHHUG00000050332) sptan1 (ENSHHUG00000050349) dync2i2 (ENSHHUG00000050771) setb (ENSHHUG00000050779) ENSHHUG00000050793 #22 Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00550000074961.b.d ENSGT00390000000224.j ENSGT00530000063187.A.h ENSGT00940000158674.h ENSGT00940000153181.m.a ENSGT01000000220495 ENSGT00440000038585.c.c ENSGT00940000156340.a.d.c ENSGT00940000161345.c ENSGT00940000166931.f ENSGT00940000178900 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a #22 ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00940000165164.f ENSGT00950000183190.a.b.b.c.a ENSGT00950000183190.a.b.b.d ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00550000074961.b.d ENSGT00390000000224.j ENSGT00530000063187.A.h ENSGT00940000158674.h ENSGT00940000153181.m.a ENSGT00940000161345.c ENSGT00940000156340.a.d.c ENSGT00440000038585.c.c ENSGT01000000220495 ENSGT00940000166931.f ENSGT00940000178900 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a #22 ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00950000183190.a.b.b.c.a ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e ENSGT00390000008220.g ENSGT00940000154856.B.d.a.a Rainbow trout MODERN SPECIES 26 ENSOMYG00000043620 ENSOMYG00000050466 ENSOMYG00000043168 chchd10 (ENSOMYG00000076774) ENSOMYG00000043280 ENSOMYG00000071467 smarcb1b (ENSOMYG00000043291) ENSOMYG00000049969 ENSOMYG00000043299 ENSOMYG00000056974 ENSOMYG00000043338 ODF2 (ENSOMYG00000043316) sptan1 (ENSOMYG00000043696) dync2i2 (ENSOMYG00000044330) setb (ENSOMYG00000044338) ENSOMYG00000044345 #22 ENSOMYG00000044443 slc25a25b (ENSOMYG00000044841) NAIF1 (ENSOMYG00000000050) eeig1b (ENSOMYG00000000140) ENSOMYG00000000180 dpm2 (ENSOMYG00000000196) PIP5KL1 (ENSOMYG00000030188) ENSOMYG00000069215 sh3glb2b (ENSOMYG00000000535) ENSOMYG00000073284 ENSOMYG00000000751 NUP188 (ENSOMYG00000001135) dolk (ENSOMYG00000001419) phyhd1 (ENSOMYG00000001455) lrrc8aa (ENSOMYG00000001481) Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT00550000074961.b.d ENSGT00390000000224.j ENSGT00530000063187.A.h ENSGT00940000158674.h ENSGT00940000153181.m.a ENSGT00940000161345.c ENSGT00940000156340.a.d.c ENSGT00440000038585.c.c ENSGT01000000220495 ENSGT00940000166931.f ENSGT00940000178900 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a #22 ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00980000199742 ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00950000183190.a.b.b.d ENSGT00390000005742.x ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e ENSGT00390000008220.h Coho salmon MODERN SPECIES 15 ENSOKIG00005034668 PTGES2 (ENSOKIG00005034633) zer1 (ENSOKIG00005034579) TBC1D13 (ENSOKIG00005034529) RALGDS (ENSOKIG00005034410) chchd10 (ENSOKIG00005034380) MMP11 (ENSOKIG00005034371) smarcb1b (ENSOKIG00005034261) ENSOKIG00005034238 ddt (ENSOKIG00005034222) ENSOKIG00005034213 ODF2 (ENSOKIG00005034144) sptan1 (ENSOKIG00005032233) dync2i2 (ENSOKIG00005032060) setb (ENSOKIG00005031970) uap1l1 (ENSOKIG00005031899) #22 ENSOKIG00005031476 SLC25A25 (ENSOKIG00005030466) naif1 (ENSOKIG00005030315) eeig1b (ENSOKIG00005030005) ENSOKIG00005029980 ENSOKIG00005029971 dpm2 (ENSOKIG00005029944) PIP5KL1 (ENSOKIG00005029891) sh3glb2b (ENSOKIG00005029183) ENSOKIG00005029120 cdk5rap2 (ENSOKIG00005029031) ENSOKIG00005029015 NUP188 (ENSOKIG00005028144) dolk (ENSOKIG00005028101) phyhd1 (ENSOKIG00005027983) Chinook salmon MODERN SPECIES 12 p2rx4a (ENSOTSG00005047749) ENSOTSG00005047750 PTGES2 (ENSOTSG00005047751) zer1 (ENSOTSG00005047752) TBC1D13 (ENSOTSG00005047753) RALGDS (ENSOTSG00005009545) chchd10 (ENSOTSG00005009548) ENSOTSG00005009550 smarcb1b (ENSOTSG00005009552) ddt (ENSOTSG00005009587) ENSOTSG00005009589 ODF2 (ENSOTSG00005009590) sptan1 (ENSOTSG00005009605) dync2i2 (ENSOTSG00005012168) setb (ENSOTSG00005012169) uap1l1 (ENSOTSG00005012170) #22 ENSOTSG00005012173 slc25a25b (ENSOTSG00005012870) naif1 (ENSOTSG00005012878) eeig1b (ENSOTSG00005012881) ENSOTSG00005013126 dpm2 (ENSOTSG00005013127) PIP5KL1 (ENSOTSG00005013128) sh3glb2b (ENSOTSG00005013130) srp9 (ENSOTSG00005014487) ephx1 (ENSOTSG00005014490) ENSOTSG00005014492 slc5a6a (ENSOTSG00005014515) rpl7l1 (ENSOTSG00005015201) NCOA1 (ENSOTSG00005015206) NTNG2 (ENSOTSG00005015209) Salmo ANCESTRAL SPECIES ENSGT00390000000224.j ENSGT00530000063187.A.h ENSGT00940000158674.h ENSGT00940000153181.m.a ENSGT01100000263505.b.b.a.b.a.a.a.b.a ENSGT01000000220495 ENSGT00440000038585.c.c ENSGT00940000156340.a.d.c ENSGT00940000161345.c ENSGT00940000166931.f ENSGT00940000178900 ENSGT00530000063497.a.a.d ENSGT00940000156662.d.h.a ENSGT00940000158483 ENSGT00940000153877.a.a.b.d ENSGT00940000153464.A.a #22 ENSGT00940000164790.a ENSGT00940000157207.a.a.g ENSGT00450000040324.b.k ENSGT00940000156811.b.c.b ENSGT00730000111912.C.c ENSGT00390000001098.i ENSGT00940000158633.a.c ENSGT00940000155841.c.b ENSGT00940000165164.f ENSGT00950000183190.a.b.b.c.a ENSGT00950000183190.a.b.b.d ENSGT00390000005742.x.a ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b.e River trout MODERN SPECIES 15 p2rx4a (ENSSTUG00000010155) PTGES2 (ENSSTUG00000010131) zer1 (ENSSTUG00000010071) TBC1D13 (ENSSTUG00000009725) RALGDS (ENSSTUG00000009533) ENSSTUG00000009512 smarcb1b (ENSSTUG00000009408) ENSSTUG00000009373 chchd10 (ENSSTUG00000009366) ddt (ENSSTUG00000009355) ENSSTUG00000009351 ODF2 (ENSSTUG00000009332) sptan1 (ENSSTUG00000007588) dync2i2 (ENSSTUG00000007316) setb (ENSSTUG00000007186) uap1l1 (ENSSTUG00000007122) #22 ENSSTUG00000007108 ENSSTUG00000006984 slc25a25b (ENSSTUG00000006529) naif1 (ENSSTUG00000006494) ENSSTUG00000006491 eeig1b (ENSSTUG00000006445) ENSSTUG00000006420 dpm2 (ENSSTUG00000006398) PIP5KL1 (ENSSTUG00000006343) sh3glb2b (ENSSTUG00000005677) ENSSTUG00000005563 ENSSTUG00000005556 ENSSTUG00000005539 cdk5rap2 (ENSSTUG00000005443) NUP188 (ENSSTUG00000004750) Atlantic salmon MODERN SPECIES ENSSSAG00000114149 gnds (ENSSSAG00000063710) ENSSSAG00000084890 ENSSSAG00000063690 ENSSSAG00000063684 smarcb1b (ENSSSAG00000063620) ENSSSAG00000063600 chchd10 (ENSSSAG00000063591) ENSSSAG00000110058 ddt (ENSSSAG00000063583) ODF2 (ENSSSAG00000063563) ENSSSAG00000085437 sptan1 (ENSSSAG00000056139) dync2i2 (ENSSSAG00000056027) setb (ENSSSAG00000071236) ENSSSAG00000055850 #22 ENSSSAG00000050742 slc25a25b (ENSSSAG00000067692) NAIF1 (ENSSSAG00000086186) ENSSSAG00000085653 eeig1b (ENSSSAG00000088028) ENSSSAG00000047449 DPM2 (ENSSSAG00000047417) PIP5KL1 (ENSSSAG00000116681) ENSSSAG00000047400 sh3glb2b (ENSSSAG00000096134) ENSSSAG00000117881 ENSSSAG00000046803 dolk (ENSSSAG00000086677) nup188 (ENSSSAG00000040336) ENSSSAG00000046753 Northern pike MODERN SPECIES 13 gstt1 (ENSELUG00000020605) zer1 (ENSELUG00000020710) TBC1D13 (ENSELUG00000020798) RALGDS (ENSELUG00000020865) ENSELUG00000026357 ENSELUG00000027151 smarcb1b (ENSELUG00000020934) MMP11 (ENSELUG00000020945) chchd10 (ENSELUG00000020960) ddt (ENSELUG00000032496) ENSELUG00000020963 ODF2 (ENSELUG00000021056) sptan1 (ENSELUG00000021139) dync2i2 (ENSELUG00000021173) setb (ENSELUG00000021202) uap1l1 (ENSELUG00000021217) #22 zdhhc12b (ENSELUG00000021228) ENSELUG00000021353 slc25a25b (ENSELUG00000001110) naif1 (ENSELUG00000021476) eeig1b (ENSELUG00000021521) dpm2 (ENSELUG00000021540) PIP5KL1 (ENSELUG00000021638) sh3glb2b (ENSELUG00000021863) ENSELUG00000028060 cdk5rap2 (ENSELUG00000021996) NUP188 (ENSELUG00000022080) dolk (ENSELUG00000022101) phyhd1 (ENSELUG00000022238) lrrc8aa (ENSELUG00000034186) dnlz (ENSELUG00000022274) Spotted gar MODERN SPECIES 660 ENSLOCG00000006369 ENSLOCG00000006357 aif1l (ENSLOCG00000006343) NUP214 (ENSLOCG00000006323) fam78ab (ENSLOCG00000006312) plpp7a (ENSLOCG00000006288) PRRC2B (ENSLOCG00000006253) pomt1 (ENSLOCG00000006233) uck1 (ENSLOCG00000006214) sh3glb2b (ENSLOCG00000006193) PIP5KL1 (ENSLOCG00000006176) dpm2 (ENSLOCG00000006158) eeig1b (ENSLOCG00000006144) naif1 (ENSLOCG00000006120) slc25a25a (ENSLOCG00000006102) uap1l1 (ENSLOCG00000006083) #22 zdhhc12a (ENSLOCG00000006071) ENSLOCG00000006047 setb (ENSLOCG00000006027) si:ch211-51h9.7 (ENSLOCG00000006014) dync2i2 (ENSLOCG00000005989) dync2i2 (ENSLOCG00000005978) sptan1 (ENSLOCG00000005929) gle1 (ENSLOCG00000005909) odf2b (ENSLOCG00000005870) ptgesl (ENSLOCG00000005855) zer1 (ENSLOCG00000005833) TBC1D13 (ENSLOCG00000005818) ralgds (ENSLOCG00000005803) cel.1 (ENSLOCG00000005785) GTF3C5 (ENSLOCG00000005767) Reedfish MODERN SPECIES 17 phf19 (ENSECRG00000009173) traf1 (ENSECRG00000009160) fibcd1b (ENSECRG00000009083) ENSECRG00000009055 PLPP7 (ENSECRG00000009044) ENSECRG00000009034 pomt1 (ENSECRG00000008998) uck1 (ENSECRG00000008969) PRRT1B (ENSECRG00000008954) sh3glb2b (ENSECRG00000008916) PIP5KL1 (ENSECRG00000008873) dpm2 (ENSECRG00000008853) eeig1b (ENSECRG00000008830) naif1 (ENSECRG00000008813) slc25a23b (ENSECRG00000008759) uap1l1 (ENSECRG00000008710) #22 zdhhc12a (ENSECRG00000008689) ENSECRG00000008621 setb (ENSECRG00000008570) dync2i2 (ENSECRG00000008558) sptan1 (ENSECRG00000008483) ENSECRG00000008436 odf2b (ENSECRG00000008409) ptgesl (ENSECRG00000008395) zer1 (ENSECRG00000008379) TBC1D13 (ENSECRG00000008362) ENSECRG00000008346 ralgds (ENSECRG00000008311) cel.1 (ENSECRG00000008266) GTF3C5 (ENSECRG00000008234) GFI1B (ENSECRG00000008218) Elephant shark MODERN SPECIES 1585 ENSCMIG00000014272 ENSCMIG00000014263 rpl28 (ENSCMIG00000014253) pdcl (ENSCMIG00000014250) ENSCMIG00000014247 ENSCMIG00000014246 ptgs1 (ENSCMIG00000014238) ENSCMIG00000014236 mrrf (ENSCMIG00000014234) rbm18 (ENSCMIG00000014232) lhx6a (ENSCMIG00000014229) morn5 (ENSCMIG00000014227) ndufa8 (ENSCMIG00000014224) ENSCMIG00000014221 edf1 (ENSCMIG00000014217) #7 uap1l1 (ENSCMIG00000014206) #22 ENSCMIG00000014197 #21 ENTPD2 (ENSCMIG00000014180) #20 ENSCMIG00000014173 ##20 PPIL3 (ENSCMIG00000014171) zdhhc12a (ENSCMIG00000014170) zer1 (ENSCMIG00000014168) TBC1D13 (ENSCMIG00000014164) lrrc8aa (ENSCMIG00000014161) ENSCMIG00000014160 ENSCMIG00000014159 phyhd1 (ENSCMIG00000014157) dolk (ENSCMIG00000014155) NUP188 (ENSCMIG00000014081) rapgef1b (ENSCMIG00000013944) med27 (ENSCMIG00000013855) Cyclostomata ANCESTRAL SPECIES ENSGT00940000153464.A.a #22 Hagfish MODERN SPECIES 54 uap1l1 (ENSEBUG00000002598) #22 ENSEBUG00000007387 ENSEBUG00000003724 ENSEBUG00000011340 dctd (ENSEBUG00000007299) ndor1 (ENSEBUG00000006362) #32 ENSEBUG00000009729 ENSEBUG00000004116 ENSEBUG00000014711 ENSEBUG00000008816 ENSEBUG00000013281 ENSEBUG00000012726 ENSEBUG00000010630 ENSEBUG00000013708 ENSEBUG00000016078 ENSEBUG00000015647 Lamprey MODERN SPECIES 468 UAP1L1 (ENSPMAG00000009044) #22 Vertebrata ANCESTRAL SPECIES ENSGT00940000153464.A.b ##22 Gnathostomata ANCESTRAL SPECIES 12 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000156880 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b ENSGT00390000018059.b ENSGT00940000160907 ENSGT00940000160836 ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 Euteleostomi ANCESTRAL SPECIES 117 ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b ENSGT00940000160907 ENSGT00940000160836.d ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 ENSGT00510000047399 Sarcopterygii ANCESTRAL SPECIES 125 ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b ENSGT00940000160907 ENSGT00940000160836.d ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 ENSGT00510000047399 Tetrapoda ANCESTRAL SPECIES 140 ENSGT00940000157774 ENSGT00940000154374.b ENSGT00940000163762.a.a ENSGT00390000004199 ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b ENSGT00940000160907 ENSGT00940000160836.d ENSGT00940000160493 Amniota ANCESTRAL SPECIES 131 ENSGT00510000046975.b ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 Mammalia ANCESTRAL SPECIES 137 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00390000007598 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 Theria ANCESTRAL SPECIES 12 ENSGT01050000244808.A.b.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00390000007598 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Eutheria ANCESTRAL SPECIES ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00940000164616 ENSGT00940000163577 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Boreoeutheria ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00940000164616 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 Euarchontoglires ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Primates ANCESTRAL SPECIES 7 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Haplorrhini ANCESTRAL SPECIES 7 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Simiiformes ANCESTRAL SPECIES 8 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Platyrrhini ANCESTRAL SPECIES 12 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.o.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.p ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00950000183210.d.a.c.b.b.a.b.b.a.b ENSGT00940000154205.h.bb ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 Cebidae ANCESTRAL SPECIES 12 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.o.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.p ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00950000183210.d.a.c.b.b.a.b.b.a.b ENSGT00940000154205.h.bb ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 Cebidae_a ANCESTRAL SPECIES 6 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.o.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.p ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00950000183210.d.a.c.b.b.a.b.b.a.b ENSGT00940000154205.h.bb.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 Capuchin MODERN SPECIES 540 HSPA6 (ENSCCAG00000001037) ENSCCAG00000035984 ENSCCAG00000029222 FCRLA (ENSCCAG00000025763) FCRLB (ENSCCAG00000016301) DUSP12 (ENSCCAG00000022950) ATF6 (ENSCCAG00000022330) OLFML2B (ENSCCAG00000030794) NOS1AP (ENSCCAG00000025710) ENSCCAG00000031626 SPATA46 (ENSCCAG00000037678) C1orf226 (ENSCCAG00000037858) SH2D1B (ENSCCAG00000037866) ENSCCAG00000018613 UHMK1 (ENSCCAG00000033689) UAP1 (ENSCCAG00000029219) ##22 DDR2 (ENSCCAG00000035421) HSD17B7 (ENSCCAG00000029054) CCDC190 (ENSCCAG00000037082) Bolivian squirrel monkey MODERN SPECIES 221 ENSSBOG00000023592 ENSSBOG00000028366 ENSSBOG00000034557 FCRLA (ENSSBOG00000021932) FCRLB (ENSSBOG00000021346) DUSP12 (ENSSBOG00000023604) ATF6 (ENSSBOG00000029816) OLFML2B (ENSSBOG00000021662) ENSSBOG00000028748 ENSSBOG00000019874 SPATA46 (ENSSBOG00000003135) SH2D1B (ENSSBOG00000023916) ENSSBOG00000027882 UHMK1 (ENSSBOG00000028187) UAP1 (ENSSBOG00000018996) ##22 DDR2 (ENSSBOG00000014912) HSD17B7 (ENSSBOG00000003536) CCDC190 (ENSSBOG00000003369) RGS4 (ENSSBOG00000023788) RGS5 (ENSSBOG00000019112) NUF2 (ENSSBOG00000020393) ENSSBOG00000022242 ENSSBOG00000023056 PBX1 (ENSSBOG00000019425) Marmoset MODERN SPECIES 9 NPL (ENSCJAG00000004793) RGS8 (ENSCJAG00000004758) RGS16 (ENSCJAG00000073390) RNASEL (ENSCJAG00000004725) RGSL1 (ENSCJAG00000004689) TEDDM1 (ENSCJAG00000023343) GLUL (ENSCJAG00000004654) ZNF648 (ENSCJAG00000004652) CACNA1E (ENSCJAG00000004426) IER5 (ENSCJAG00000004423) MR1 (ENSCJAG00000004391) STX6 (ENSCJAG00000004356) KIAA1614 (ENSCJAG00000004342) ENSCJAG00000087031 UHMK1 (ENSCJAG00000004291) UAP1 (ENSCJAG00000004264) ##22 DDR2 (ENSCJAG00000004221) CCDC190 (ENSCJAG00000004163) HSD17B7 (ENSCJAG00000004176) RGS4 (ENSCJAG00000073413) NUF2 (ENSCJAG00000004050) ENSCJAG00000079672 PBX1 (ENSCJAG00000004712) ENSCJAG00000086352 LMX1A (ENSCJAG00000082002) RXRG (ENSCJAG00000004656) LRRC52 (ENSCJAG00000004653) MGST3 (ENSCJAG00000004619) ENSCJAG00000004575 TMCO1 (ENSCJAG00000004561) ENSCJAG00000004523 Mas night monkey MODERN SPECIES 893 ENSANAG00000025221 OLFML2B (ENSANAG00000023374) ENSANAG00000037585 SPATA46 (ENSANAG00000000057) SH2D1B (ENSANAG00000001807) ENSANAG00000028318 ENSANAG00000030813 UHMK1 (ENSANAG00000022526) UAP1 (ENSANAG00000027960) ##22 DDR2 (ENSANAG00000022647) HSD17B7 (ENSANAG00000023761) CCDC190 (ENSANAG00000023182) RGS4 (ENSANAG00000019849) RGS5 (ENSANAG00000026600) NUF2 (ENSANAG00000027298) ENSANAG00000027887 ENSANAG00000013627 ENSANAG00000027656 PBX1 (ENSANAG00000026588) LMX1A (ENSANAG00000020495) RXRG (ENSANAG00000031942) LRRC52 (ENSANAG00000029215) MGST3 (ENSANAG00000022897) ALDH9A1 (ENSANAG00000029992) Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 10 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 Hominoidea ANCESTRAL SPECIES 7 ENSGT01050000244808.A.b.a.a.a.a ENSGT00940000163722 ENSGT00950000183030.m.b.b.m.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00940000164616 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00940000154326.a.b.b.m.b.a ENSGT00390000008608 ENSGT00940000163309 Hominidae ANCESTRAL SPECIES 6 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT00940000163722 ENSGT00950000183030.m.b.b.m.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00940000154326.a.b.b.m.b.a ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.i ENSGT00950000183030.m.b.b.m.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340.e ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00940000154326.a.b.b.m.b.a ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.i ENSGT00950000183030.m.b.b.m.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340.e ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00940000154326.a.b.b.m.b.a ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 Pan ANCESTRAL SPECIES ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.i ENSGT00950000183030.m.b.b.m.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340.e ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00940000154326.a.b.b.m.b.a ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 Chimpanzee MODERN SPECIES ENSPTRG00000049334 ENSPTRG00000001590 ENSPTRG00000043442 FCRLA (ENSPTRG00000001592) FCRLB (ENSPTRG00000001593) DUSP12 (ENSPTRG00000001594) ATF6 (ENSPTRG00000001596) ENSPTRG00000052580 OLFML2B (ENSPTRG00000001597) NOS1AP (ENSPTRG00000001598) SPATA46 (ENSPTRG00000001599) ENSPTRG00000030327 SH2D1B (ENSPTRG00000024320) ENSPTRG00000048731 UHMK1 (ENSPTRG00000001601) UAP1 (ENSPTRG00000001602) ##22 DDR2 (ENSPTRG00000001603) ENSPTRG00000051980 HSD17B7 (ENSPTRG00000002435) CCDC190 (ENSPTRG00000047448) RGS4 (ENSPTRG00000001608) RGS5 (ENSPTRG00000001609) NUF2 (ENSPTRG00000001610) PBX1 (ENSPTRG00000001611) LMX1A (ENSPTRG00000001612) RXRG (ENSPTRG00000023788) LRRC52 (ENSPTRG00000001614) MGST3 (ENSPTRG00000001616) ALDH9A1 (ENSPTRG00000001617) TMCO1 (ENSPTRG00000001618) UCK2 (ENSPTRG00000001619) Bonobo MODERN SPECIES ENSPPAG00000024903 ENSPPAG00000028278 ENSPPAG00000038085 ENSPPAG00000032343 FCRLA (ENSPPAG00000039817) FCRLB (ENSPPAG00000027503) DUSP12 (ENSPPAG00000033359) ATF6 (ENSPPAG00000025323) ENSPPAG00000004038 OLFML2B (ENSPPAG00000028533) NOS1AP (ENSPPAG00000041755) SPATA46 (ENSPPAG00000014103) ENSPPAG00000031588 ENSPPAG00000034441 UHMK1 (ENSPPAG00000041163) UAP1 (ENSPPAG00000032875) ##22 DDR2 (ENSPPAG00000030809) ENSPPAG00000016253 HSD17B7 (ENSPPAG00000028691) CCDC190 (ENSPPAG00000041751) ENSPPAG00000032457 RGS5 (ENSPPAG00000031360) NUF2 (ENSPPAG00000042496) PBX1 (ENSPPAG00000012661) LMX1A (ENSPPAG00000032600) RXRG (ENSPPAG00000032033) LRRC52 (ENSPPAG00000042343) ENSPPAG00000029238 MGST3 (ENSPPAG00000036962) ALDH9A1 (ENSPPAG00000041488) ENSPPAG00000033973 Human MODERN SPECIES ENSG00000289768 FCGR2C (ENSG00000244682) FCGR3B (ENSG00000162747) FCGR2B (ENSG00000072694) FCRLA (ENSG00000132185) FCRLB (ENSG00000162746) DUSP12 (ENSG00000081721) ATF6 (ENSG00000118217) OLFML2B (ENSG00000162745) NOS1AP (ENSG00000198929) ENSG00000254706 SPATA46 (ENSG00000171722) C1orf226 (ENSG00000239887) SH2D1B (ENSG00000198574) UHMK1 (ENSG00000152332) UAP1 (ENSG00000117143) ##22 DDR2 (ENSG00000162733) HSD17B7 (ENSG00000132196) CCDC190 (ENSG00000185860) RGS4 (ENSG00000117152) RGS5 (ENSG00000143248) NUF2 (ENSG00000143228) PBX1 (ENSG00000185630) LMX1A (ENSG00000162761) RXRG (ENSG00000143171) LRRC52 (ENSG00000162763) MGST3 (ENSG00000143198) ALDH9A1 (ENSG00000143149) TMCO1 (ENSG00000143183) UCK2 (ENSG00000143179) FAM78B (ENSG00000188859) Gorilla MODERN SPECIES ENSGGOG00000042232 ENSGGOG00000042027 ENSGGOG00000003859 ENSGGOG00000023508 FCRLA (ENSGGOG00000001288) FCRLB (ENSGGOG00000028059) DUSP12 (ENSGGOG00000004596) ATF6 (ENSGGOG00000013807) OLFML2B (ENSGGOG00000008860) NOS1AP (ENSGGOG00000013747) C1orf226 (ENSGGOG00000013762) SPATA46 (ENSGGOG00000013760) SH2D1B (ENSGGOG00000014121) ENSGGOG00000037180 UHMK1 (ENSGGOG00000002032) UAP1 (ENSGGOG00000016431) ##22 DDR2 (ENSGGOG00000011593) HSD17B7 (ENSGGOG00000011264) CCDC190 (ENSGGOG00000001952) ENSGGOG00000011376 RGS5 (ENSGGOG00000013984) NUF2 (ENSGGOG00000007980) PBX1 (ENSGGOG00000011303) ENSGGOG00000042136 LMX1A (ENSGGOG00000003286) RXRG (ENSGGOG00000003983) LRRC52 (ENSGGOG00000007321) MGST3 (ENSGGOG00000013271) ENSGGOG00000000900 ENSGGOG00000041829 UCK2 (ENSGGOG00000038402) Orangutan MODERN SPECIES HSPA6 (ENSPPYG00000000595) ENSPPYG00000000594 ENSPPYG00000000593 ENSPPYG00000035167 FCRLA (ENSPPYG00000000592) FCRLB (ENSPPYG00000000591) DUSP12 (ENSPPYG00000000590) ATF6 (ENSPPYG00000000589) OLFML2B (ENSPPYG00000000588) NOS1AP (ENSPPYG00000000585) SPATA46 (ENSPPYG00000000586) C1orf226 (ENSPPYG00000034846) SH2D1B (ENSPPYG00000000584) ENSPPYG00000000583 UHMK1 (ENSPPYG00000000582) UAP1 (ENSPPYG00000000581) ##22 DDR2 (ENSPPYG00000000580) ENSPPYG00000000579 HSD17B7 (ENSPPYG00000000578) CCDC190 (ENSPPYG00000037665) RGS4 (ENSPPYG00000000576) RGS5 (ENSPPYG00000030379) NUF2 (ENSPPYG00000000574) PBX1 (ENSPPYG00000000572) LMX1A (ENSPPYG00000036392) RXRG (ENSPPYG00000000571) LRRC52 (ENSPPYG00000000570) MGST3 (ENSPPYG00000000569) ALDH9A1 (ENSPPYG00000000568) TMCO1 (ENSPPYG00000035165) UCK2 (ENSPPYG00000000563) Gibbon MODERN SPECIES 2 ENSNLEG00000014397 HSPA6 (ENSNLEG00000019161) ENSNLEG00000014401 ENSNLEG00000035812 ENSNLEG00000030726 FCRLA (ENSNLEG00000035092) FCRLB (ENSNLEG00000014502) DUSP12 (ENSNLEG00000014515) ATF6 (ENSNLEG00000014528) OLFML2B (ENSNLEG00000014543) NOS1AP (ENSNLEG00000026577) ENSNLEG00000035216 SH2D1B (ENSNLEG00000032972) ENSNLEG00000029762 UHMK1 (ENSNLEG00000026604) UAP1 (ENSNLEG00000026707) ##22 DDR2 (ENSNLEG00000014557) ENSNLEG00000019162 HSD17B7 (ENSNLEG00000014591) CCDC190 (ENSNLEG00000014616) ENSNLEG00000014620 ENSNLEG00000032703 RGS5 (ENSNLEG00000029484) NUF2 (ENSNLEG00000014636) ENSNLEG00000028806 PBX1 (ENSNLEG00000014662) ENSNLEG00000014674 RXRG (ENSNLEG00000014680) LRRC52 (ENSNLEG00000014689) ENSNLEG00000034998 MGST3 (ENSNLEG00000014693) Cercopithecidae ANCESTRAL SPECIES 22 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.m ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.n ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340 Rhinopithecus ANCESTRAL SPECIES 501 ENSGT00510000046975.b.u ENSGT00950000183400 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT01030000234540.B.a.a.a.b.a.a ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00390000013340 Black snub-nosed monkey MODERN SPECIES 81 NOS1AP (ENSRBIG00000037811) ENSRBIG00000020244 C1orf226 (ENSRBIG00000039500) SPATA46 (ENSRBIG00000036254) SH2D1B (ENSRBIG00000037629) ENSRBIG00000034998 UHMK1 (ENSRBIG00000044498) UAP1 (ENSRBIG00000013912) ##22 DDR2 (ENSRBIG00000043795) HSD17B7 (ENSRBIG00000034771) Golden snub-nosed monkey MODERN SPECIES 3088 UAP1 (ENSRROG00000039072) ##22 DDR2 (ENSRROG00000039159) Cercopithecinae ANCESTRAL SPECIES ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.n ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.m ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.m ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00950000183400 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340 ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00940000154756.A.vc ENSGT00390000016274 ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT01050000244808.A.b.a.a.a.a.n ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.m ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340 ENSGT00390000009510.a ENSGT01100000263474.a.b.b.e.b.a.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00940000154756.A.vc ENSGT00390000016274 ENSGT00440000034918.q.a.a.a.d.l.a.b ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a Olive baboon MODERN SPECIES ENSPANG00000044353 CFAP126 (ENSPANG00000000423) ENSPANG00000022189 ENSPANG00000000424 HSPA6 (ENSPANG00000011199) FCGR3A (ENSPANG00000009890) FCRLA (ENSPANG00000005457) FCRLB (ENSPANG00000007594) DUSP12 (ENSPANG00000031950) ATF6 (ENSPANG00000021910) OLFML2B (ENSPANG00000013118) ENSPANG00000023226 SPATA46 (ENSPANG00000004524) SH2D1B (ENSPANG00000041929) UHMK1 (ENSPANG00000001321) UAP1 (ENSPANG00000001322) ##22 ENSPANG00000046218 DDR2 (ENSPANG00000011453) ENSPANG00000045838 HSD17B7 (ENSPANG00000026079) ENSPANG00000050063 H2BC26 (ENSPANG00000042066) H2AC25 (ENSPANG00000039633) H3-4 (ENSPANG00000032788) TRIM17 (ENSPANG00000014849) TRIM11 (ENSPANG00000004478) ENSPANG00000035184 ENSPANG00000030630 IBA57 (ENSPANG00000021033) GJC2 (ENSPANG00000035104) ENSPANG00000020945 Cercopithecinae_d ANCESTRAL SPECIES 33 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.m ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00950000183400 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00550000076417 ENSGT00390000013340 Drill MODERN SPECIES 1194 ENSMLEG00000039802 ENSMLEG00000041835 ENSMLEG00000015171 FCRLA (ENSMLEG00000033079) FCRLB (ENSMLEG00000030331) DUSP12 (ENSMLEG00000038194) ATF6 (ENSMLEG00000030589) OLFML2B (ENSMLEG00000042987) ENSMLEG00000027654 NOS1AP (ENSMLEG00000041632) SPATA46 (ENSMLEG00000044425) C1orf226 (ENSMLEG00000031973) SH2D1B (ENSMLEG00000037190) ENSMLEG00000037007 UHMK1 (ENSMLEG00000038941) UAP1 (ENSMLEG00000031971) ##22 DDR2 (ENSMLEG00000037936) ENSMLEG00000031905 HSD17B7 (ENSMLEG00000009439) Sooty mangabey MODERN SPECIES 144 ENSCATG00000033683 ENSCATG00000030243 FCRLA (ENSCATG00000042987) FCRLB (ENSCATG00000044207) DUSP12 (ENSCATG00000033548) ATF6 (ENSCATG00000039639) OLFML2B (ENSCATG00000016884) ENSCATG00000014176 ENSCATG00000034528 ENSCATG00000031900 SPATA46 (ENSCATG00000038021) ENSCATG00000026109 SH2D1B (ENSCATG00000030003) ENSCATG00000034357 UHMK1 (ENSCATG00000037499) UAP1 (ENSCATG00000038108) ##22 DDR2 (ENSCATG00000020556) ENSCATG00000034922 HSD17B7 (ENSCATG00000030953) Macaca ANCESTRAL SPECIES ENSGT00390000000566.q.b.a ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.n ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00950000183400 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00440000034918.q.a.a.a.d.l.a.b ENSGT00940000154756.A.vc ENSGT00390000016274 ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 Pig-tailed macaque MODERN SPECIES 262 CFAP126 (ENSMNEG00000039106) ENSMNEG00000038076 ENSMNEG00000035617 HSPA6 (ENSMNEG00000034011) ENSMNEG00000039329 FCRLA (ENSMNEG00000039782) FCRLB (ENSMNEG00000029566) DUSP12 (ENSMNEG00000041603) ATF6 (ENSMNEG00000033322) OLFML2B (ENSMNEG00000039453) ENSMNEG00000036127 ENSMNEG00000033313 SPATA46 (ENSMNEG00000036208) SH2D1B (ENSMNEG00000038294) UHMK1 (ENSMNEG00000004169) UAP1 (ENSMNEG00000039818) ##22 DDR2 (ENSMNEG00000001558) HSD17B7 (ENSMNEG00000039039) Macaca_a ANCESTRAL SPECIES ENSGT00940000160641 ENSGT00980000201983 ENSGT01030000234556.a.b.b ENSGT00390000000566.q.b.a ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.n.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00940000159221 ENSGT00940000157757 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b.a ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.a ENSGT01100000263514.A.f ENSGT00940000162155 ENSGT00940000160371 ENSGT00440000034918.q.a.a.a.d.l.a.b ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 ENSGT00390000010309 ENSGT00390000005590 ENSGT00950000183080.a.b.a.b.b.`b ENSGT00940000160510 Rhesus MODERN SPECIES ENSMMUG00000042475 MPZ (ENSMMUG00000001216) SDHC (ENSMMUG00000012411) CFAP126 (ENSMMUG00000008251) FCGR3 (ENSMMUG00000016206) FCGR2A (ENSMMUG00000003775) FCRLA (ENSMMUG00000004042) FCRLB (ENSMMUG00000056482) ATF6 (ENSMMUG00000004049) OLFML2B (ENSMMUG00000023042) SPATA46 (ENSMMUG00000004790) NOS1AP (ENSMMUG00000042262) SH2D1B (ENSMMUG00000008511) UHMK1 (ENSMMUG00000019513) ENSMMUG00000063984 UAP1 (ENSMMUG00000019514) ##22 DDR2 (ENSMMUG00000009330) HSD17B7 (ENSMMUG00000009332) RNF187 (ENSMMUG00000048590) H2BC26 (ENSMMUG00000053022) H3-4 (ENSMMUG00000055227) TRIM17 (ENSMMUG00000005307) TRIM11 (ENSMMUG00000005306) ENSMMUG00000057834 GJC2 (ENSMMUG00000023086) GUK1 (ENSMMUG00000023085) C1H1orf35 (ENSMMUG00000002791) ARF1 (ENSMMUG00000052432) WNT3A (ENSMMUG00000050712) WNT9A (ENSMMUG00000008338) PRSS38 (ENSMMUG00000060353) Crab-eating macaque MODERN SPECIES ENSMFAG00000049823 ENSMFAG00000043175 ENSMFAG00000038066 ENSMFAG00000048559 DUSP12 (ENSMFAG00000043743) ENSMFAG00000059325 ENSMFAG00000038697 ENSMFAG00000040289 ATF6 (ENSMFAG00000059314) OLFML2B (ENSMFAG00000040313) SPATA46 (ENSMFAG00000039214) ENSMFAG00000042773 SH2D1B (ENSMFAG00000040797) ENSMFAG00000053016 UHMK1 (ENSMFAG00000041742) UAP1 (ENSMFAG00000042529) ##22 DDR2 (ENSMFAG00000036365) ENSMFAG00000062302 RNF187 (ENSMFAG00000035159) H2BC26 (ENSMFAG00000049429) ENSMFAG00000057302 ENSMFAG00000063754 TRIM17 (ENSMFAG00000001716) TRIM11 (ENSMFAG00000042805) ENSMFAG00000008386 IBA57 (ENSMFAG00000002470) GUK1 (ENSMFAG00000039838) MRPL55 (ENSMFAG00000064574) C1orf35 (ENSMFAG00000045378) ENSMFAG00000034073 WNT3A (ENSMFAG00000042689) Vervet Monkey MODERN SPECIES 12 MPZ (ENSCSAG00000002680) CFAP126 (ENSCSAG00000002682) ENSCSAG00000002687 ENSCSAG00000002691 ENSCSAG00000002694 FCRLA (ENSCSAG00000002698) FCRLB (ENSCSAG00000002704) DUSP12 (ENSCSAG00000002716) ENSCSAG00000000090 ATF6 (ENSCSAG00000002721) OLFML2B (ENSCSAG00000002725) SPATA46 (ENSCSAG00000002729) ENSCSAG00000002735 SH2D1B (ENSCSAG00000002739) UHMK1 (ENSCSAG00000002742) UAP1 (ENSCSAG00000002744) ##22 DDR2 (ENSCSAG00000002747) HSD17B7 (ENSCSAG00000002749) Catarrhini ANCESTRAL SPECIES ENSGT00940000153464.A.b.b ##22 Hominoidea ANCESTRAL SPECIES ENSGT00940000153464.A.b.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00940000153464.A.b.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000153464.A.b.b ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000153464.A.b.b ##22 Pan ANCESTRAL SPECIES 3 ENSGT00940000155494 ENSGT00940000163306 ENSGT00940000158410 ENSGT00950000183080.a.b.a.a.e ENSGT00530000064085 ENSGT00390000014122.i.b.a.a.a.a.c.a ENSGT00940000157854 ENSGT00940000158599 ENSGT00950000183192.a.b ENSGT00390000010523.c.a ENSGT00530000063282.t.h.a.b.d ENSGT00950000182950.C.a.a ENSGT01030000234570.d.b.a.b.a ENSGT01090000259987.b.b.a.a.b ENSGT00390000004027 ENSGT00940000153464.A.b.b ##22 ENSGT00940000155246.j.b.a ENSGT00550000074898 ENSGT00940000153704.B ENSGT00940000160397 ENSGT00940000157439 ENSGT00390000000603.b ENSGT00940000161315 ENSGT00390000013474.b.a ENSGT00940000161498 ENSGT00940000159590 ENSGT00390000011219 ENSGT00940000154534.a ENSGT00390000000713.h.a.a.b ENSGT00390000004405.b ENSGT00950000182892.a.b.a.a Chimpanzee MODERN SPECIES 8 ENSPTRG00000048511 ENSPTRG00000050723 ENSPTRG00000009573 ENSPTRG00000009319 ENSPTRG00000051345 NSF (ENSPTRG00000009320) WNT3 (ENSPTRG00000009321) ENSPTRG00000009322 ENSPTRG00000009323 ENSPTRG00000052446 ENSPTRG00000051416 CDC27 (ENSPTRG00000009326) MYL4 (ENSPTRG00000024314) EFCAB13 (ENSPTRG00000009329) ENSPTRG00000045761 ENSPTRG00000048037 ##22 NPEPPS (ENSPTRG00000009330) KPNB1 (ENSPTRG00000009333) TBKBP1 (ENSPTRG00000009334) TBX21 (ENSPTRG00000009335) OSBPL7 (ENSPTRG00000009336) MRPL10 (ENSPTRG00000009337) LRRC46 (ENSPTRG00000009338) SCRN2 (ENSPTRG00000009339) SP6 (ENSPTRG00000009340) SP2 (ENSPTRG00000009342) PNPO (ENSPTRG00000009343) PRR15L (ENSPTRG00000047216) CDK5RAP3 (ENSPTRG00000009345) COPZ2 (ENSPTRG00000009346) NFE2L1 (ENSPTRG00000022631) Bonobo MODERN SPECIES 8 SPPL2C (ENSPPAG00000026104) MAPT (ENSPPAG00000005022) KANSL1 (ENSPPAG00000035503) ENSPPAG00000037357 ENSPPAG00000020146 ENSPPAG00000031656 NSF (ENSPPAG00000030856) WNT3 (ENSPPAG00000037563) ENSPPAG00000033174 ENSPPAG00000004563 RPRML (ENSPPAG00000021337) CDC27 (ENSPPAG00000035989) MYL4 (ENSPPAG00000032176) ITGB3 (ENSPPAG00000030328) ENSPPAG00000019537 ENSPPAG00000041328 ##22 ENSPPAG00000031240 ENSPPAG00000041383 KPNB1 (ENSPPAG00000028842) ENSPPAG00000040088 TBX21 (ENSPPAG00000033988) OSBPL7 (ENSPPAG00000027887) MRPL10 (ENSPPAG00000034452) LRRC46 (ENSPPAG00000038983) SCRN2 (ENSPPAG00000028214) SP6 (ENSPPAG00000026169) SP2 (ENSPPAG00000027065) PNPO (ENSPPAG00000038148) PRR15L (ENSPPAG00000003316) ENSPPAG00000029145 COPZ2 (ENSPPAG00000043351) Gorilla MODERN SPECIES 18 ENSGGOG00000041613 ENSGGOG00000039899 ENSGGOG00000023839 ENSGGOG00000043339 ENSGGOG00000041351 ENSGGOG00000026089 ENSGGOG00000040255 WNT3 (ENSGGOG00000007186) WNT9B (ENSGGOG00000017083) ENSGGOG00000001255 RPRML (ENSGGOG00000000099) ENSGGOG00000040439 CDC27 (ENSGGOG00000014729) MYL4 (ENSGGOG00000009722) ITGB3 (ENSGGOG00000007757) ENSGGOG00000023488 ##22 EFCAB13 (ENSGGOG00000022715) ENSGGOG00000022991 KPNB1 (ENSGGOG00000008089) TBKBP1 (ENSGGOG00000002206) TBX21 (ENSGGOG00000002208) OSBPL7 (ENSGGOG00000015344) MRPL10 (ENSGGOG00000015353) LRRC46 (ENSGGOG00000012667) SCRN2 (ENSGGOG00000004547) SP6 (ENSGGOG00000036261) SP2 (ENSGGOG00000005330) PNPO (ENSGGOG00000003786) PRR15L (ENSGGOG00000037816) ENSGGOG00000022994 COPZ2 (ENSGGOG00000002264) Cercopithecidae ANCESTRAL SPECIES ENSGT00940000153464.A.b.b ##22 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000153464.A.b.b ##22 Black snub-nosed monkey MODERN SPECIES 717 CDC27 (ENSRBIG00000037806) MYL4 (ENSRBIG00000028988) ITGB3 (ENSRBIG00000028310) ENSRBIG00000044240 ##22 ENSRBIG00000014557 EFCAB13 (ENSRBIG00000037369) ENSRBIG00000041956 ENSRBIG00000019355 EFCAB3 (ENSRBIG00000032561) ENSRBIG00000023555 ENSRBIG00000033312 TLK2 (ENSRBIG00000043769) MRC2 (ENSRBIG00000008443) MARCHF10 (ENSRBIG00000033353) ENSRBIG00000041110 TANC2 (ENSRBIG00000043606) CYB561 (ENSRBIG00000038628) ACE (ENSRBIG00000024860) KCNH6 (ENSRBIG00000029435) Tarsier DUPLICATION Tarsier MODERN SPECIES 6912 NOS1AP (ENSTSYG00000009370) SPATA46 (ENSTSYG00000009376) ENSTSYG00000031818 SH2D1B (ENSTSYG00000007905) ENSTSYG00000014457 UHMK1 (ENSTSYG00000011273) UAP1 (ENSTSYG00000002725) ##22 DDR2 (ENSTSYG00000003971) Tarsier MODERN SPECIES 6972 PRKG1 (ENSTSYG00000001463) ENSTSYG00000030359 ##22 DKK1 (ENSTSYG00000026512) Strepsirrhini ANCESTRAL SPECIES ENSGT00390000000566 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d.a Lemuriformes ANCESTRAL SPECIES 11 ENSGT00390000000566 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d.a Mouse lemur MODERN SPECIES 11 HSPA6 (ENSMICG00000003132) ENSMICG00000027298 ENSMICG00000032464 ENSMICG00000004499 FCRLA (ENSMICG00000000037) ENSMICG00000042673 DUSP12 (ENSMICG00000035927) ATF6 (ENSMICG00000000038) OLFML2B (ENSMICG00000000040) ENSMICG00000000045 SPATA46 (ENSMICG00000000046) SH2D1B (ENSMICG00000000048) ENSMICG00000036205 ENSMICG00000038236 ENSMICG00000017256 UAP1 (ENSMICG00000028400) ##22 DDR2 (ENSMICG00000009930) HSD17B7 (ENSMICG00000009945) CCDC190 (ENSMICG00000041856) RGS4 (ENSMICG00000036693) RGS5 (ENSMICG00000007854) NUF2 (ENSMICG00000014089) PBX1 (ENSMICG00000001280) LMX1A (ENSMICG00000041533) RXRG (ENSMICG00000009970) LRRC52 (ENSMICG00000041448) MGST3 (ENSMICG00000008309) ENSMICG00000008315 ENSMICG00000037106 TMCO1 (ENSMICG00000004363) ENSMICG00000044256 Lemuriformes_a ANCESTRAL SPECIES 57 ENSGT00390000000566 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d.a Greater bamboo lemur MODERN SPECIES 595 ENSPSMG00000004041 FCRLA (ENSPSMG00000003945) FCRLB (ENSPSMG00000003879) DUSP12 (ENSPSMG00000003864) ATF6 (ENSPSMG00000003827) OLFML2B (ENSPSMG00000003729) ENSPSMG00000003716 NOS1AP (ENSPSMG00000003703) SPATA46 (ENSPSMG00000003679) C1orf226 (ENSPSMG00000003677) SH2D1B (ENSPSMG00000003675) ENSPSMG00000003671 ENSPSMG00000003669 UHMK1 (ENSPSMG00000003662) UAP1 (ENSPSMG00000003627) ##22 DDR2 (ENSPSMG00000003597) HSD17B7 (ENSPSMG00000003552) CEP350 (ENSPSMG00000003480) TOR1AIP1 (ENSPSMG00000003435) ENSPSMG00000003421 TOR1AIP2 (ENSPSMG00000003413) FAM163A (ENSPSMG00000003402) Coquerels sifaka MODERN SPECIES 163 CFAP126 (ENSPCOG00000005786) ENSPCOG00000015447 HSPA6 (ENSPCOG00000014242) ENSPCOG00000018017 ENSPCOG00000027185 FCRLA (ENSPCOG00000005798) FCRLB (ENSPCOG00000028493) DUSP12 (ENSPCOG00000019591) ENSPCOG00000019042 OLFML2B (ENSPCOG00000006456) NOS1AP (ENSPCOG00000016219) SPATA46 (ENSPCOG00000014075) C1orf226 (ENSPCOG00000017829) SH2D1B (ENSPCOG00000000648) UHMK1 (ENSPCOG00000025540) UAP1 (ENSPCOG00000012712) ##22 DDR2 (ENSPCOG00000021216) HSD17B7 (ENSPCOG00000024083) CCDC190 (ENSPCOG00000014443) RGS4 (ENSPCOG00000003407) RGS5 (ENSPCOG00000020036) NUF2 (ENSPCOG00000021915) PBX1 (ENSPCOG00000015286) LMX1A (ENSPCOG00000025376) RXRG (ENSPCOG00000021935) LRRC52 (ENSPCOG00000007315) ENSPCOG00000021898 ALDH9A1 (ENSPCOG00000020786) TMCO1 (ENSPCOG00000025294) UCK2 (ENSPCOG00000015853) Bushbaby MODERN SPECIES 131 SDHC (ENSOGAG00000013748) CFAP126 (ENSOGAG00000013751) ENSOGAG00000015288 ENSOGAG00000000585 FCRLA (ENSOGAG00000000588) FCRLB (ENSOGAG00000000589) DUSP12 (ENSOGAG00000000590) ATF6 (ENSOGAG00000001917) OLFML2B (ENSOGAG00000001921) NOS1AP (ENSOGAG00000001923) SPATA46 (ENSOGAG00000001926) ENSOGAG00000031249 ENSOGAG00000032240 ENSOGAG00000026160 UHMK1 (ENSOGAG00000016110) UAP1 (ENSOGAG00000016117) ##22 DDR2 (ENSOGAG00000010985) HSD17B7 (ENSOGAG00000010994) CCDC190 (ENSOGAG00000010997) RGS4 (ENSOGAG00000012669) RGS5 (ENSOGAG00000012674) NUF2 (ENSOGAG00000011652) PBX1 (ENSOGAG00000000132) LMX1A (ENSOGAG00000011315) RXRG (ENSOGAG00000011318) LRRC52 (ENSOGAG00000026494) MGST3 (ENSOGAG00000006196) ENSOGAG00000006198 TMCO1 (ENSOGAG00000011784) UCK2 (ENSOGAG00000014716) ENSOGAG00000032359 Euarchontoglires_A ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Glires ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Rodentia ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Rodentia_B ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000165337 ENSGT00940000164616 ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Myomorpha ANCESTRAL SPECIES 16 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Muroidea ANCESTRAL SPECIES 9 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Muroidea_A ANCESTRAL SPECIES 12 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Cricetidae ANCESTRAL SPECIES 13 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000165337 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Cricetinae ANCESTRAL SPECIES 4 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00860000135883 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.t ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00940000165337 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Golden Hamster MODERN SPECIES 644 Fcgr4 (ENSMAUG00000018871) ENSMAUG00000015313 Fcrla (ENSMAUG00000016446) Fcrlb (ENSMAUG00000016181) Dusp12 (ENSMAUG00000010755) Atf6 (ENSMAUG00000011288) Olfml2b (ENSMAUG00000009203) ENSMAUG00000009919 Nos1ap (ENSMAUG00000013773) Spata46 (ENSMAUG00000001643) ENSMAUG00000012815 ENSMAUG00000000846 ENSMAUG00000022031 Uhmk1 (ENSMAUG00000001735) Uap1 (ENSMAUG00000001545) ##22 Ddr2 (ENSMAUG00000001189) Hsd17b7 (ENSMAUG00000021760) Ccdc190 (ENSMAUG00000021696) Rgs4 (ENSMAUG00000018633) Rgs5 (ENSMAUG00000021837) Nuf2 (ENSMAUG00000020433) Pbx1 (ENSMAUG00000019850) Lmx1a (ENSMAUG00000018894) Rxrg (ENSMAUG00000019514) Lrrc52 (ENSMAUG00000022044) Mgst3 (ENSMAUG00000022162) Aldh9a1 (ENSMAUG00000021995) Tmco1 (ENSMAUG00000014853) ENSMAUG00000011674 Uck2 (ENSMAUG00000005491) Chinese hamster chok1gshd MODERN SPECIES 2 ENSCGRG00001000910 Fcgr4 (ENSCGRG00001009243) ENSCGRG00001002401 ENSCGRG00001024979 ENSCGRG00001012534 Fcrla (ENSCGRG00001007910) Fcrlb (ENSCGRG00001012268) Dusp12 (ENSCGRG00001013172) Gm26620 (ENSCGRG00001002561) Atf6 (ENSCGRG00001005537) Olfml2b (ENSCGRG00001022621) ENSCGRG00001002529 Spata46 (ENSCGRG00001001942) ENSCGRG00001004035 Uhmk1 (ENSCGRG00001013226) Uap1 (ENSCGRG00001022983) ##22 Ddr2 (ENSCGRG00001010683) Hsd17b7 (ENSCGRG00001012734) Ccdc190 (ENSCGRG00001017352) Rgs4 (ENSCGRG00001021878) Rgs5 (ENSCGRG00001009987) Nuf2 (ENSCGRG00001014967) Pbx1 (ENSCGRG00001022276) Lmx1a (ENSCGRG00001014704) Rxrg (ENSCGRG00001019006) Lrrc52 (ENSCGRG00001014921) Mgst3 (ENSCGRG00001016115) Aldh9a1 (ENSCGRG00001023734) Tmco1 (ENSCGRG00001024372) Uck2 (ENSCGRG00001005584) ENSCGRG00001016705 Cricetidae_B ANCESTRAL SPECIES 8 ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Prairie vole MODERN SPECIES 14 ENSMOCG00000012280 Fcgr4 (ENSMOCG00000008658) ENSMOCG00000016405 ENSMOCG00000019796 Fcrlb (ENSMOCG00000000528) Dusp12 (ENSMOCG00000008092) Atf6 (ENSMOCG00000016442) Olfml2b (ENSMOCG00000014122) Nos1ap (ENSMOCG00000022978) Spata46 (ENSMOCG00000016091) ENSMOCG00000015185 ENSMOCG00000008286 ENSMOCG00000014186 Uhmk1 (ENSMOCG00000008369) ENSMOCG00000012566 Uap1 (ENSMOCG00000018085) ##22 Ddr2 (ENSMOCG00000021294) Hsd17b7 (ENSMOCG00000017459) Ccdc190 (ENSMOCG00000019843) ENSMOCG00000016099 Lrtm1 (ENSMOCG00000004779) Cacna2d3 (ENSMOCG00000020648) Selenok (ENSMOCG00000009292) Actr8 (ENSMOCG00000022198) Il17rb (ENSMOCG00000000655) Chdh (ENSMOCG00000001382) ENSMOCG00000021702 Cacna1d (ENSMOCG00000015213) Tkt (ENSMOCG00000009002) Prkcd (ENSMOCG00000019091) Rft1 (ENSMOCG00000014616) Northern American deer mouse MODERN SPECIES 2 ENSPEMG00000010624 Fcgr4 (ENSPEMG00000008514) ENSPEMG00000004069 ENSPEMG00000001576 Fcrla (ENSPEMG00000009332) Fcrlb (ENSPEMG00000002098) Gm26620 (ENSPEMG00000024474) Dusp12 (ENSPEMG00000000877) Atf6 (ENSPEMG00000018229) Olfml2b (ENSPEMG00000008167) Nos1ap (ENSPEMG00000014465) Spata46 (ENSPEMG00000005249) Gm7694 (ENSPEMG00000026884) Uhmk1 (ENSPEMG00000001487) ENSPEMG00000024044 Uap1 (ENSPEMG00000016224) ##22 Ddr2 (ENSPEMG00000012156) Hsd17b7 (ENSPEMG00000022786) Ccdc190 (ENSPEMG00000023644) Rgs4 (ENSPEMG00000031119) Rgs5 (ENSPEMG00000025824) Nuf2 (ENSPEMG00000023899) ENSPEMG00000019682 Pbx1 (ENSPEMG00000009084) Lmx1a (ENSPEMG00000016259) Rxrg (ENSPEMG00000013249) Lrrc52 (ENSPEMG00000025049) Mgst3 (ENSPEMG00000012628) Aldh9a1 (ENSPEMG00000007235) Tmco1 (ENSPEMG00000008521) Uck2 (ENSPEMG00000011469) Murinae ANCESTRAL SPECIES 11 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Mus ANCESTRAL SPECIES 5 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.eb ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000163577.b ENSGT00940000163577.a ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Mus_A ANCESTRAL SPECIES 5 ENSGT01050000244808.A.b.a.a.a.a.eb ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577.b ENSGT00940000163577.a ENSGT00900000143287 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608.i ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Mus_B ANCESTRAL SPECIES 7 ENSGT01050000244808.A.b.a.a.a.a.eb ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577.b ENSGT00940000163577.a ENSGT00900000143287 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608.i ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Mouse MODERN SPECIES Fcgr3 (ENSMUSG00000059498) Fcgr4 (ENSMUSG00000059089) Fcgr2b (ENSMUSG00000026656) Fcrla (ENSMUSG00000038421) Fcrlb (ENSMUSG00000070524) Gm26620 (ENSMUSG00000096968) Dusp12 (ENSMUSG00000026659) Atf6 (ENSMUSG00000026663) Olfml2b (ENSMUSG00000038463) Spata46 (ENSMUSG00000042800) Nos1ap (ENSMUSG00000038473) Gm7694 (ENSMUSG00000102752) Sh2d1b1 (ENSMUSG00000102418) Sh2d1b2 (ENSMUSG00000073494) Uhmk1 (ENSMUSG00000026667) Uap1 (ENSMUSG00000026670) ##22 Ddr2 (ENSMUSG00000026674) Hsd17b7 (ENSMUSG00000026675) Ccdc190 (ENSMUSG00000070532) Rgs4 (ENSMUSG00000038530) Rgs5 (ENSMUSG00000026678) Nuf2 (ENSMUSG00000026683) Pbx1 (ENSMUSG00000052534) Lmx1a (ENSMUSG00000026686) Rxrg (ENSMUSG00000015843) Lrrc52 (ENSMUSG00000040485) Mgst3 (ENSMUSG00000026688) Aldh9a1 (ENSMUSG00000026687) Tmco1 (ENSMUSG00000052428) Uck2 (ENSMUSG00000026558) Fam78b (ENSMUSG00000060568) Mus_C ANCESTRAL SPECIES 1 ENSGT01050000244808.A.b.a.a.a.a.eb ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577.b ENSGT00940000163577.a ENSGT00900000143287 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608.i ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Steppe mouse MODERN SPECIES 3030 ENSMSIG00000013493 Fcgr2b (ENSMSIG00000013209) Fcrla (ENSMSIG00000013140) Fcrlb (ENSMSIG00000013130) Gm26620 (ENSMSIG00000013120) Dusp12 (ENSMSIG00000013104) Atf6 (ENSMSIG00000013034) Olfml2b (ENSMSIG00000013009) ENSMSIG00000013007 Spata46 (ENSMSIG00000012994) ENSMSIG00000012883 Sh2d1b1 (ENSMSIG00000012861) Sh2d1b2 (ENSMSIG00000012848) ENSMSIG00000012838 Uhmk1 (ENSMSIG00000012729) Uap1 (ENSMSIG00000012696) ##22 Ddr2 (ENSMSIG00000012540) Hsd17b7 (ENSMSIG00000012507) Ccdc190 (ENSMSIG00000012470) Rgs4 (ENSMSIG00000012434) Rgs5 (ENSMSIG00000012409) ENSMSIG00000012391 Nuf2 (ENSMSIG00000012309) spretus MODERN SPECIES Sdhc (MGP_SPRETEiJ_G0015657) Cfap126 (MGP_SPRETEiJ_G0015656) Fcgr3 (MGP_SPRETEiJ_G0015655) Fcgr4 (MGP_SPRETEiJ_G0015654) Fcgr2b (MGP_SPRETEiJ_G0015653) Fcrla (MGP_SPRETEiJ_G0015652) Fcrlb (MGP_SPRETEiJ_G0015651) Gm26620 (MGP_SPRETEiJ_G0015650) Dusp12 (MGP_SPRETEiJ_G0015649) Atf6 (MGP_SPRETEiJ_G0015648) Olfml2b (MGP_SPRETEiJ_G0015647) Spata46 (MGP_SPRETEiJ_G0015646) Nos1ap (MGP_SPRETEiJ_G0015645) Gm7694 (MGP_SPRETEiJ_G0015644) MGP_SPRETEiJ_G0015643 Uap1 (MGP_SPRETEiJ_G0015642) ##22 Ddr2 (MGP_SPRETEiJ_G0015641) Hsd17b7 (MGP_SPRETEiJ_G0015640) Ccdc190 (MGP_SPRETEiJ_G0015639) Rgs4 (MGP_SPRETEiJ_G0015638) Rgs5 (MGP_SPRETEiJ_G0015637) Nuf2 (MGP_SPRETEiJ_G0015636) Pbx1 (MGP_SPRETEiJ_G0015635) Lmx1a (MGP_SPRETEiJ_G0015634) Rxrg (MGP_SPRETEiJ_G0015633) Lrrc52 (MGP_SPRETEiJ_G0015632) Mgst3 (MGP_SPRETEiJ_G0015631) Aldh9a1 (MGP_SPRETEiJ_G0015630) Tmco1 (MGP_SPRETEiJ_G0015629) Uck2 (MGP_SPRETEiJ_G0015628) Fam78b (MGP_SPRETEiJ_G0015627) Ryukyu mouse MODERN SPECIES Cfap126 (MGP_CAROLIEiJ_G0014851) Fcgr4 (MGP_CAROLIEiJ_G0014850) Fcgr2b (MGP_CAROLIEiJ_G0014849) Fcrla (MGP_CAROLIEiJ_G0014848) Fcrlb (MGP_CAROLIEiJ_G0014847) Gm26620 (MGP_CAROLIEiJ_G0014846) Dusp12 (MGP_CAROLIEiJ_G0014845) Atf6 (MGP_CAROLIEiJ_G0014844) Olfml2b (MGP_CAROLIEiJ_G0014843) Spata46 (MGP_CAROLIEiJ_G0014842) Nos1ap (MGP_CAROLIEiJ_G0014841) Gm7694 (MGP_CAROLIEiJ_G0014840) Sh2d1b1 (MGP_CAROLIEiJ_G0014839) Sh2d1b2 (MGP_CAROLIEiJ_G0014838) MGP_CAROLIEiJ_G0014837 Uap1 (MGP_CAROLIEiJ_G0014836) ##22 Ddr2 (MGP_CAROLIEiJ_G0014835) Hsd17b7 (MGP_CAROLIEiJ_G0014834) Ccdc190 (MGP_CAROLIEiJ_G0014833) Rgs4 (MGP_CAROLIEiJ_G0014832) Rgs5 (MGP_CAROLIEiJ_G0014831) Nuf2 (MGP_CAROLIEiJ_G0014830) Pbx1 (MGP_CAROLIEiJ_G0014829) Lmx1a (MGP_CAROLIEiJ_G0014828) Rxrg (MGP_CAROLIEiJ_G0014827) Lrrc52 (MGP_CAROLIEiJ_G0014826) Mgst3 (MGP_CAROLIEiJ_G0014825) Aldh9a1 (MGP_CAROLIEiJ_G0014824) MGP_CAROLIEiJ_G0014823 Uck2 (MGP_CAROLIEiJ_G0014822) Fam78b (MGP_CAROLIEiJ_G0014821) Shrew mouse MODERN SPECIES 18 MGP_PahariEiJ_G0028088 Fcgr4 (MGP_PahariEiJ_G0028087) Fcgr2b (MGP_PahariEiJ_G0028086) Fcrla (MGP_PahariEiJ_G0028085) Fcrlb (MGP_PahariEiJ_G0028084) Gm26620 (MGP_PahariEiJ_G0028083) Dusp12 (MGP_PahariEiJ_G0028082) Atf6 (MGP_PahariEiJ_G0028081) Olfml2b (MGP_PahariEiJ_G0028080) Spata46 (MGP_PahariEiJ_G0028079) Nos1ap (MGP_PahariEiJ_G0028078) Gm7694 (MGP_PahariEiJ_G0028077) MGP_PahariEiJ_G0028076 Sh2d1b2 (MGP_PahariEiJ_G0028075) Uhmk1 (MGP_PahariEiJ_G0028074) Uap1 (MGP_PahariEiJ_G0028073) ##22 Ddr2 (MGP_PahariEiJ_G0028072) Hsd17b7 (MGP_PahariEiJ_G0028071) Ccdc190 (MGP_PahariEiJ_G0028070) Rgs4 (MGP_PahariEiJ_G0028069) Rgs5 (MGP_PahariEiJ_G0028068) Nuf2 (MGP_PahariEiJ_G0028067) Pbx1 (MGP_PahariEiJ_G0028066) Lmx1a (MGP_PahariEiJ_G0028065) Rxrg (MGP_PahariEiJ_G0028064) Lrrc52 (MGP_PahariEiJ_G0028063) Mgst3 (MGP_PahariEiJ_G0028062) Aldh9a1 (MGP_PahariEiJ_G0028061) MGP_PahariEiJ_G0028060 Uck2 (MGP_PahariEiJ_G0028059) Fam78b (MGP_PahariEiJ_G0028058) Rat DUPLICATION Rat MODERN SPECIES 4 Fcgr3a (ENSRNOG00000024382) Fcgr2b (ENSRNOG00000046452) Fcrla (ENSRNOG00000003136) Fcrlb (ENSRNOG00000003135) Dusp12 (ENSRNOG00000003100) LOC100362384 (ENSRNOG00000031540) LOC100911728 (ENSRNOG00000063975) Atf6 (ENSRNOG00000024632) Olfml2b (ENSRNOG00000003018) AABR07021736.1 (ENSRNOG00000034300) Spata46 (ENSRNOG00000002972) Nos1ap (ENSRNOG00000042929) Sh2d1b2 (ENSRNOG00000069420) AABR07021734.1 (ENSRNOG00000059957) Uhmk1 (ENSRNOG00000002941) Uap1 (ENSRNOG00000002926) ##22 Ddr2 (ENSRNOG00000002881) Hsd17b7 (ENSRNOG00000002826) ENSRNOG00000033515 Ccdc190 (ENSRNOG00000025005) Rgs4 (ENSRNOG00000002773) Rgs5 (ENSRNOG00000002730) ENSRNOG00000066769 Nuf2 (ENSRNOG00000002711) Pbx1 (ENSRNOG00000070119) Lmx1a (ENSRNOG00000004642) Rxrg (ENSRNOG00000004537) Lrrc52 (ENSRNOG00000004356) Mgst3 (ENSRNOG00000004245) Aldh9a1 (ENSRNOG00000004027) Tmco1 (ENSRNOG00000003928) Rat MODERN SPECIES 16 Msh2 (ENSRNOG00000015796) Kcnk12 (ENSRNOG00000016110) Msh6 (ENSRNOG00000016134) Fbxo11 (ENSRNOG00000016396) H2az1-ps2 (ENSRNOG00000031564) Foxn2 (ENSRNOG00000040110) Ppp1r21 (ENSRNOG00000016528) Ston1 (ENSRNOG00000016688) Gtf2a1l (ENSRNOG00000016703) Lhcgr (ENSRNOG00000016712) Fshr (ENSRNOG00000016783) ENSRNOG00000070800 ENSRNOG00000070393 ENSRNOG00000069544 Nrxn1 (ENSRNOG00000050220) AABR07063082.1 (ENSRNOG00000031342) ##22 ENSRNOG00000067942 Crnkl1-ps1 (ENSRNOG00000040045) AABR07063126.1 (ENSRNOG00000002495) Mtm1 (ENSRNOG00000002516) Alkbh8 (ENSRNOG00000024525) Cwf19l2 (ENSRNOG00000024372) AABR07064590.1 (ENSRNOG00000050408) Upper Galilee mountains blind mole rat MODERN SPECIES 1470 ENSNGAG00000017696 ENSNGAG00000014287 Fcgr4 (ENSNGAG00000021092) ENSNGAG00000011371 ENSNGAG00000004618 Fcrlb (ENSNGAG00000012219) Gm26620 (ENSNGAG00000015352) Dusp12 (ENSNGAG00000013271) Atf6 (ENSNGAG00000012357) Olfml2b (ENSNGAG00000011890) Nos1ap (ENSNGAG00000017936) Spata46 (ENSNGAG00000017281) ENSNGAG00000019543 ENSNGAG00000007636 Uhmk1 (ENSNGAG00000014202) Uap1 (ENSNGAG00000017391) ##22 Ddr2 (ENSNGAG00000011070) Hsd17b7 (ENSNGAG00000018750) Ccdc190 (ENSNGAG00000000184) Lesser Egyptian jerboa MODERN SPECIES 99 ENSJJAG00000019454 Fcgr4 (ENSJJAG00000022025) ENSJJAG00000023172 Fcrla (ENSJJAG00000016094) Fcrlb (ENSJJAG00000017591) ENSJJAG00000019034 Atf6 (ENSJJAG00000020891) ENSJJAG00000001331 Olfml2b (ENSJJAG00000006072) Nos1ap (ENSJJAG00000011196) Spata46 (ENSJJAG00000014177) ENSJJAG00000014680 Uhmk1 (ENSJJAG00000015993) ENSJJAG00000017644 Uap1 (ENSJJAG00000021659) ##22 Ddr2 (ENSJJAG00000010116) Hsd17b7 (ENSJJAG00000012148) Ccdc190 (ENSJJAG00000013635) Rgs4 (ENSJJAG00000014256) Rgs5 (ENSJJAG00000015242) Nuf2 (ENSJJAG00000015135) ENSJJAG00000017273 ENSJJAG00000018522 Cadm2 (ENSJJAG00000001556) ENSJJAG00000011025 ENSJJAG00000001124 Vgll3 (ENSJJAG00000008774) Chmp2b (ENSJJAG00000010165) Pou1f1 (ENSJJAG00000011761) Htr1f (ENSJJAG00000013994) Kangaroo rat MODERN SPECIES 376 Pdc (ENSDORG00000002197) Odr4 (ENSDORG00000004797) ENSDORG00000004792 ENSDORG00000028414 ENSDORG00000004789 Hmcn1 (ENSDORG00000000927) Ivns1abp (ENSDORG00000010533) Swt1 (ENSDORG00000010531) Trmt1l (ENSDORG00000003298) Rnf2 (ENSDORG00000003231) ENSDORG00000013136 Edem3 (ENSDORG00000015760) 1700025G04Rik (ENSDORG00000028610) ENSDORG00000000004 Uhmk1 (ENSDORG00000011233) Uap1 (ENSDORG00000005510) ##22 Ddr2 (ENSDORG00000004970) Hsd17b7 (ENSDORG00000004971) Ccdc190 (ENSDORG00000004973) Rgs4 (ENSDORG00000008241) Rgs5 (ENSDORG00000025285) Nuf2 (ENSDORG00000010505) Pbx1 (ENSDORG00000012241) Lmx1a (ENSDORG00000014036) Rxrg (ENSDORG00000014034) Lrrc52 (ENSDORG00000013852) Mgst3 (ENSDORG00000005319) Aldh9a1 (ENSDORG00000012670) Tmco1 (ENSDORG00000024383) Uck2 (ENSDORG00000024295) Fam78b (ENSDORG00000026622) Rodentia_A ANCESTRAL SPECIES ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Hystricomorpha ANCESTRAL SPECIES 2 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Hystricomorpha_a ANCESTRAL SPECIES 11 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Hystricomorpha_b ANCESTRAL SPECIES 8 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 179 HSPA5 (ENSODEG00000003702) RABEPK (ENSODEG00000003723) ENSODEG00000003752 ENSODEG00000003771 SCAI (ENSODEG00000003843) GOLGA1 (ENSODEG00000003980) ENSODEG00000004095 ENSODEG00000004120 OLFML2A (ENSODEG00000004138) NR6A1 (ENSODEG00000004183) ENSODEG00000004234 NR5A1 (ENSODEG00000004244) ENSODEG00000004257 ENSODEG00000019019 NEK6 (ENSODEG00000004126) ENSODEG00000004179 ##22 LHX2 (ENSODEG00000004212) DENND1A (ENSODEG00000004310) CRB2 (ENSODEG00000004481) ENSODEG00000019097 ENSODEG00000004632 RABGAP1 (ENSODEG00000004811) ENSODEG00000019246 ENSODEG00000019228 ZBTB26 (ENSODEG00000005887) ZBTB6 (ENSODEG00000019273) ENSODEG00000005918 PDCL (ENSODEG00000005932) ENSODEG00000006008 ENSODEG00000006020 ENSODEG00000006064 Degu MODERN SPECIES 78 TTLL9 (ENSODEG00000011360) DUSP15 (ENSODEG00000011813) FOXS1 (ENSODEG00000020017) MYLK2 (ENSODEG00000013441) ENSODEG00000011442 TPX2 (ENSODEG00000012321) BCL2L1 (ENSODEG00000011428) ENSODEG00000019781 COX4I2 (ENSODEG00000012477) ID1 (ENSODEG00000012592) MCTS2 (ENSODEG00000011493) HM13 (ENSODEG00000012125) ENSODEG00000011012 REM1 (ENSODEG00000012458) DEFB124 (ENSODEG00000011947) ENSODEG00000010872 ##22 DEFB123 (ENSODEG00000011781) ENSODEG00000012410 DEFB119 (ENSODEG00000011255) ENSODEG00000012325 DEFB128 (ENSODEG00000014590) ENSODEG00000019969 C20orf96 (ENSODEG00000011348) ZCCHC3 (ENSODEG00000010730) SOX12 (ENSODEG00000020040) NRSN2 (ENSODEG00000011631) TRIB3 (ENSODEG00000010963) RBCK1 (ENSODEG00000010172) TBC1D20 (ENSODEG00000010895) ENSODEG00000011479 ENSODEG00000019802 Degu DUPLICATION Degu MODERN SPECIES 157 ENSODEG00000007553 FCRLB (ENSODEG00000007543) DUSP12 (ENSODEG00000008746) ENSODEG00000007639 ENSODEG00000019524 ATF6 (ENSODEG00000006653) OLFML2B (ENSODEG00000007482) NOS1AP (ENSODEG00000009278) SPATA46 (ENSODEG00000007496) C1orf226 (ENSODEG00000007727) ENSODEG00000007269 ENSODEG00000006619 ENSODEG00000006566 UHMK1 (ENSODEG00000006380) ENSODEG00000007230 ENSODEG00000006482 ##22 ENSODEG00000006001 DDR2 (ENSODEG00000005987) HSD17B7 (ENSODEG00000007036) CCDC190 (ENSODEG00000007128) ENSODEG00000006225 RGS4 (ENSODEG00000007399) RGS5 (ENSODEG00000006436) NUF2 (ENSODEG00000006206) PBX1 (ENSODEG00000008268) LMX1A (ENSODEG00000006784) RXRG (ENSODEG00000007429) LRRC52 (ENSODEG00000007590) MGST3 (ENSODEG00000008534) ALDH9A1 (ENSODEG00000006714) TMCO1 (ENSODEG00000006261) Degu MODERN SPECIES 122 COL8A1 (ENSODEG00000004998) ENSODEG00000006867 DCBLD2 (ENSODEG00000005751) ENSODEG00000005393 ENSODEG00000019181 ENSODEG00000019164 ENSODEG00000005746 CPOX (ENSODEG00000004750) GPR15 (ENSODEG00000019236) ENSODEG00000005283 ENSODEG00000005152 ENSODEG00000019229 NPSR1 (ENSODEG00000005018) ENSODEG00000005414 ENSODEG00000004808 ENSODEG00000005165 ##22 ENSODEG00000004827 ENSODEG00000019232 ENSODEG00000004814 ZNF25 (ENSODEG00000005495) ZNF248 (ENSODEG00000004951) BMS1 (ENSODEG00000005554) RET (ENSODEG00000004491) CSGALNACT2 (ENSODEG00000005562) RASGEF1A (ENSODEG00000004726) ENSODEG00000004747 ENSODEG00000006180 ENSODEG00000019266 ENSODEG00000005547 CXCL12 (ENSODEG00000005442) TMEM72 (ENSODEG00000005215) Long-tailed chinchilla MODERN SPECIES 169 HSPA6 (ENSCLAG00000012873) ENSCLAG00000012099 ENSCLAG00000007260 ENSCLAG00000006167 FCRLA (ENSCLAG00000004447) FCRLB (ENSCLAG00000006704) DUSP12 (ENSCLAG00000010307) ATF6 (ENSCLAG00000012192) OLFML2B (ENSCLAG00000012343) SPATA46 (ENSCLAG00000006220) ENSCLAG00000016599 SH2D1B (ENSCLAG00000005824) ENSCLAG00000004715 UAP1 (ENSCLAG00000007532) ##22 DDR2 (ENSCLAG00000008308) HSD17B7 (ENSCLAG00000005057) CCDC190 (ENSCLAG00000006720) RGS4 (ENSCLAG00000009055) RGS5 (ENSCLAG00000006523) NUF2 (ENSCLAG00000009748) PBX1 (ENSCLAG00000009776) LMX1A (ENSCLAG00000006865) RXRG (ENSCLAG00000007511) LRRC52 (ENSCLAG00000006632) MGST3 (ENSCLAG00000007690) ENSCLAG00000006096 TMCO1 (ENSCLAG00000004923) ENSCLAG00000004400 UCK2 (ENSCLAG00000010692) Guinea pig MODERN SPECIES 39 UHMK1 (ENSCPOG00000004561) UAP1 (ENSCPOG00000004568) ##22 DDR2 (ENSCPOG00000009721) HSD17B7 (ENSCPOG00000030957) CCDC190 (ENSCPOG00000038251) RGS4 (ENSCPOG00000031194) RGS5 (ENSCPOG00000033467) ENSCPOG00000039704 NUF2 (ENSCPOG00000015019) PBX1 (ENSCPOG00000005958) ENSCPOG00000038291 LMX1A (ENSCPOG00000025320) RXRG (ENSCPOG00000015343) LRRC52 (ENSCPOG00000015344) MGST3 (ENSCPOG00000015346) ALDH9A1 (ENSCPOG00000015347) TMCO1 (ENSCPOG00000013728) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 20 SDHC (ENSHGLG00000049173) CFAP126 (ENSHGLG00000010619) ENSHGLG00000045344 HSPA6 (ENSHGLG00000002619) ENSHGLG00000002720 ENSHGLG00000014734 FCRLA (ENSHGLG00000019609) FCRLB (ENSHGLG00000019604) DUSP12 (ENSHGLG00000038411) ENSHGLG00000019948 ATF6 (ENSHGLG00000019506) OLFML2B (ENSHGLG00000002985) SPATA46 (ENSHGLG00000032913) ENSHGLG00000003369 ENSHGLG00000004032 ENSHGLG00000013192 ##22 DDR2 (ENSHGLG00000007636) HSD17B7 (ENSHGLG00000009322) RGS4 (ENSHGLG00000044423) ENSHGLG00000035946 ENSHGLG00000032628 Rgs5 (ENSHGLG00000042926) NUF2 (ENSHGLG00000003907) PBX1 (ENSHGLG00000004849) LMX1A (ENSHGLG00000003212) LRRC52 (ENSHGLG00000003658) RXRG (ENSHGLG00000003380) MGST3 (ENSHGLG00000003866) ALDH9A1 (ENSHGLG00000004082) ENSHGLG00000004945 ENSHGLG00000031882 Naked mole-rat female MODERN SPECIES 27 ENSHGLG00000013973 COPS4 (ENSHGLG00000044616) PLAC8 (ENSHGLG00000016121) ENSHGLG00000049647 ENSHGLG00000016197 HPSE (ENSHGLG00000018930) HELQ (ENSHGLG00000019137) ENSHGLG00000036989 ENSHGLG00000036220 ENSHGLG00000037131 Gpat3 (ENSHGLG00000003421) ENSHGLG00000043322 ENSHGLG00000045281 ENSHGLG00000037327 ENSHGLG00000035706 ENSHGLG00000004204 ##22 ENSHGLG00000004589 CDS1 (ENSHGLG00000049384) WDFY3 (ENSHGLG00000002966) ENSHGLG00000041678 ENSHGLG00000000796 ENSHGLG00000000768 ENSHGLG00000019846 ENSHGLG00000001024 ENSHGLG00000000901 ENSHGLG00000046052 ENSHGLG00000034553 ENSHGLG00000019806 ENSHGLG00000005605 ENSHGLG00000001145 SLC10A6 (ENSHGLG00000001287) Sciuridae ANCESTRAL SPECIES ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000164616 ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b ENSGT00940000160836.d Marmotini ANCESTRAL SPECIES 34 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.ub ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.tb ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b ENSGT00940000160836.d Marmotini_b ANCESTRAL SPECIES 261 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 Squirrel MODERN SPECIES 431 OLFML2B (ENSSTOG00000025327) NOS1AP (ENSSTOG00000010583) SPATA46 (ENSSTOG00000010590) C1orf226 (ENSSTOG00000034532) UHMK1 (ENSSTOG00000004265) ENSSTOG00000021540 UAP1 (ENSSTOG00000000912) ##22 DDR2 (ENSSTOG00000011612) HSD17B7 (ENSSTOG00000024820) ENSSTOG00000032719 Arctic ground squirrel MODERN SPECIES 551 OLFML2B (ENSUPAG00010006603) ENSUPAG00010006598 SPATA46 (ENSUPAG00010006589) NOS1AP (ENSUPAG00010006567) SH2D1B (ENSUPAG00010006548) ENSUPAG00010006542 UHMK1 (ENSUPAG00010006521) ENSUPAG00010006515 UAP1 (ENSUPAG00010006475) ##22 DDR2 (ENSUPAG00010006446) HSD17B7 (ENSUPAG00010006435) ENSUPAG00010006429 Alpin marmot MODERN SPECIES 29 HSPA6 (ENSMMMG00000021953) ENSMMMG00000021951 ENSMMMG00000021940 FCRLA (ENSMMMG00000021939) FCRLB (ENSMMMG00000021937) ENSMMMG00000021932 ATF6 (ENSMMMG00000021922) OLFML2B (ENSMMMG00000021911) ENSMMMG00000021908 NOS1AP (ENSMMMG00000021891) SPATA46 (ENSMMMG00000021885) ENSMMMG00000021881 SH2D1B (ENSMMMG00000021878) ENSMMMG00000021868 UHMK1 (ENSMMMG00000021840) UAP1 (ENSMMMG00000021814) ##22 DDR2 (ENSMMMG00000021769) HSD17B7 (ENSMMMG00000021761) RGS4 (ENSMMMG00000021742) RGS5 (ENSMMMG00000021737) NUF2 (ENSMMMG00000021710) PBX1 (ENSMMMG00000021655) LMX1A (ENSMMMG00000021633) RXRG (ENSMMMG00000021608) LRRC52 (ENSMMMG00000021599) MGST3 (ENSMMMG00000021590) ENSMMMG00000020694 TMCO1 (ENSMMMG00000020681) ENSMMMG00000020677 UCK2 (ENSMMMG00000020655) FAM78B (ENSMMMG00000020648) Eurasian red squirrel MODERN SPECIES ENSSVLG00005013804 ENSSVLG00005014017 ENSSVLG00005014192 FCRLA (ENSSVLG00005014309) FCRLB (ENSSVLG00005014686) ENSSVLG00005014879 ENSSVLG00005014905 ATF6 (ENSSVLG00005014934) ENSSVLG00005014975 OLFML2B (ENSSVLG00005015059) ENSSVLG00005015160 ENSSVLG00005015344 SPATA46 (ENSSVLG00005015397) SH2D1B (ENSSVLG00005015442) UHMK1 (ENSSVLG00005005691) UAP1 (ENSSVLG00005005747) ##22 DDR2 (ENSSVLG00005005804) HSD17B7 (ENSSVLG00005005883) ENSSVLG00005005907 SPIDR (ENSSVLG00005005941) ENSSVLG00005006182 SUPT3H (ENSSVLG00005006225) CEBPD (ENSSVLG00005006258) MCM4 (ENSSVLG00005006762) UBE2V2 (ENSSVLG00005006994) ENSSVLG00005007040 ENSSVLG00005007058 ENSSVLG00005007072 CLXN (ENSSVLG00005007101) ENSSVLG00005007144 SNAI2 (ENSSVLG00005007170) Lagomorpha ANCESTRAL SPECIES 1 ENSGT00940000160641 ENSGT00530000064299 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.t ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b ENSGT00940000160836.d Rabbit MODERN SPECIES 4 CFAP126 (ENSOCUG00000014435) ENSOCUG00000027815 ENSOCUG00000035695 ENSOCUG00000024349 ENSOCUG00000011685 FCRLA (ENSOCUG00000007906) FCRLB (ENSOCUG00000007914) DUSP12 (ENSOCUG00000007924) ATF6 (ENSOCUG00000007930) OLFML2B (ENSOCUG00000003594) SPATA46 (ENSOCUG00000007698) ENSOCUG00000027759 ENSOCUG00000039230 ENSOCUG00000006287 UHMK1 (ENSOCUG00000012411) UAP1 (ENSOCUG00000015579) ##22 HMGB1 (ENSOCUG00000022718) DDR2 (ENSOCUG00000011443) CCDC190 (ENSOCUG00000009524) ENSOCUG00000023193 RGS4 (ENSOCUG00000005204) RGS5 (ENSOCUG00000001169) NUF2 (ENSOCUG00000001171) PBX1 (ENSOCUG00000007609) LMX1A (ENSOCUG00000005509) RXRG (ENSOCUG00000005512) LRRC52 (ENSOCUG00000005518) MGST3 (ENSOCUG00000010376) ENSOCUG00000010380 ENSOCUG00000008441 UCK2 (ENSOCUG00000008446) Pika MODERN SPECIES 8988 UAP1 (ENSOPRG00000014406) ##22 Tree shrew MODERN SPECIES 710 UAP1 (ENSTBEG00000009264) ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000153464.A.b ##22 Hedgehog MODERN SPECIES 1882 ENSEEUG00000006718 ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 Artiodactyla ANCESTRAL SPECIES ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Suina ANCESTRAL SPECIES 8 ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00910000148347 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Pig MODERN SPECIES 12 ENSSSCG00000053490 HSPA6 (ENSSSCG00000047932) ENSSSCG00000036618 ENSSSCG00000006350 FCRLA (ENSSSCG00000030246) FCRLB (ENSSSCG00000006348) ENSSSCG00000039073 DUSP12 (ENSSSCG00000006347) ATF6 (ENSSSCG00000006346) OLFML2B (ENSSSCG00000006345) SPATA46 (ENSSSCG00000006343) ENSSSCG00000006344 ENSSSCG00000032108 ENSSSCG00000046961 UHMK1 (ENSSSCG00000006342) UAP1 (ENSSSCG00000006340) ##22 DDR2 (ENSSSCG00000006338) HSD17B7 (ENSSSCG00000006337) ENSSSCG00000041209 CCDC190 (ENSSSCG00000006336) RGS4 (ENSSSCG00000006335) ENSSSCG00000047766 RGS5 (ENSSSCG00000037821) NUF2 (ENSSSCG00000006333) ENSSSCG00000061621 ENSSSCG00000062927 LMX1A (ENSSSCG00000006329) RXRG (ENSSSCG00000006328) LRRC52 (ENSSSCG00000029977) MGST3 (ENSSSCG00000006325) ENSSSCG00000006324 Chacoan peccary MODERN SPECIES 774 ENSCWAG00000006086 HSPA6 (ENSCWAG00000006064) ENSCWAG00000005985 ENSCWAG00000005815 FCRLA (ENSCWAG00000005320) FCRLB (ENSCWAG00000005127) DUSP12 (ENSCWAG00000005091) ENSCWAG00000005034 ATF6 (ENSCWAG00000005011) OLFML2B (ENSCWAG00000004928) NOS1AP (ENSCWAG00000004833) SPATA46 (ENSCWAG00000004799) C1orf226 (ENSCWAG00000004783) SH2D1B (ENSCWAG00000004757) UHMK1 (ENSCWAG00000004724) UAP1 (ENSCWAG00000004643) ##22 DDR2 (ENSCWAG00000004578) HSD17B7 (ENSCWAG00000004543) CCDC190 (ENSCWAG00000004494) RGS4 (ENSCWAG00000004377) RGS5 (ENSCWAG00000004327) NUF2 (ENSCWAG00000004192) PBX1 (ENSCWAG00000004074) LMX1A (ENSCWAG00000004006) RXRG (ENSCWAG00000003855) LRRC52 (ENSCWAG00000003811) MGST3 (ENSCWAG00000012645) ENSCWAG00000012601 TMCO1 (ENSCWAG00000012548) UCK2 (ENSCWAG00000012503) FAM78B (ENSCWAG00000012477) Artiodactyla_a ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Camelidae ANCESTRAL SPECIES 6 ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.a.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Arabian camel MODERN SPECIES 13 ENSCDRG00005017769 HSPA6 (ENSCDRG00005017786) ENSCDRG00005017812 ENSCDRG00005017864 FCRLA (ENSCDRG00005017962) FCRLB (ENSCDRG00005018092) DUSP12 (ENSCDRG00005018202) ATF6 (ENSCDRG00005018223) ENSCDRG00005003470 OLFML2B (ENSCDRG00005003525) ENSCDRG00005003587 SPATA46 (ENSCDRG00005003679) SH2D1B (ENSCDRG00005003706) ENSCDRG00005003756 UHMK1 (ENSCDRG00005003824) UAP1 (ENSCDRG00005003860) ##22 DDR2 (ENSCDRG00005003991) HSD17B7 (ENSCDRG00005004054) CCDC190 (ENSCDRG00005004083) RGS4 (ENSCDRG00005004118) RGS5 (ENSCDRG00005004164) NUF2 (ENSCDRG00005004229) ENSCDRG00005004309 ENSCDRG00005004337 LMX1A (ENSCDRG00005004381) RXRG (ENSCDRG00005004406) LRRC52 (ENSCDRG00005004441) MGST3 (ENSCDRG00005004470) ENSCDRG00005004490 TMCO1 (ENSCDRG00005004596) UCK2 (ENSCDRG00005004673) Alpaca MODERN SPECIES 2738 ENSVPAG00000010724 SH2D1B (ENSVPAG00000010725) UHMK1 (ENSVPAG00000010726) UAP1 (ENSVPAG00000010727) ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Cetacea ANCESTRAL SPECIES ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.b ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Odontoceti ANCESTRAL SPECIES ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.b ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000166434 ENSGT00940000163859.a.a ENSGT00390000003248.a.b.a.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 Odontoceti_a ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.a.b.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.b.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000163859.a.a ENSGT00390000003248.a.b.a.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 Dolphin MODERN SPECIES 2695 NOS1AP (ENSTTRG00000003545) SPATA46 (ENSTTRG00000003552) ENSTTRG00000003555 SH2D1B (ENSTTRG00000003556) UHMK1 (ENSTTRG00000003560) UAP1 (ENSTTRG00000003563) ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT01050000244808.A.b.a.a.a.a.b.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.b.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000163859.a.a ENSGT00390000003248.a.b.a.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 Monodontidae ANCESTRAL SPECIES ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.b.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000168189 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000163859.a.a ENSGT00390000003248.a.b.a.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 Beluga whale MODERN SPECIES 94 HSPA6 (ENSDLEG00000018241) ENSDLEG00000018227 ENSDLEG00000018215 FCRLA (ENSDLEG00000018201) FCRLB (ENSDLEG00000018186) DUSP12 (ENSDLEG00000018177) ATF6 (ENSDLEG00000018132) OLFML2B (ENSDLEG00000018119) ENSDLEG00000018097 ENSDLEG00000018090 SPATA46 (ENSDLEG00000018086) ENSDLEG00000018076 SH2D1B (ENSDLEG00000018055) UHMK1 (ENSDLEG00000018034) UAP1 (ENSDLEG00000017970) ##22 ENSDLEG00000017947 DDR2 (ENSDLEG00000017901) HSD17B7 (ENSDLEG00000017870) ENSDLEG00000017861 CCDC190 (ENSDLEG00000017846) RGS4 (ENSDLEG00000017831) RGS5 (ENSDLEG00000017805) NUF2 (ENSDLEG00000017742) ENSDLEG00000017729 PBX1 (ENSDLEG00000017706) ENSDLEG00000017673 LMX1A (ENSDLEG00000017636) RXRG (ENSDLEG00000017605) LRRC52 (ENSDLEG00000017593) MGST3 (ENSDLEG00000017577) Narwhal MODERN SPECIES 304 MPZ (ENSMMNG00015005253) SDHC (ENSMMNG00015005210) CFAP126 (ENSMMNG00015005181) ENSMMNG00015005172 FCRLA (ENSMMNG00015005142) FCRLB (ENSMMNG00015005094) DUSP12 (ENSMMNG00015005083) ENSMMNG00015005077 ATF6 (ENSMMNG00015005069) OLFML2B (ENSMMNG00015005056) SPATA46 (ENSMMNG00015005047) ENSMMNG00015005034 ENSMMNG00015005027 ENSMMNG00015005017 UHMK1 (ENSMMNG00015005007) UAP1 (ENSMMNG00015004995) ##22 DDR2 (ENSMMNG00015004981) HSD17B7 (ENSMMNG00015004973) CCDC190 (ENSMMNG00015004967) RGS4 (ENSMMNG00015004030) RGS5 (ENSMMNG00015004005) NUF2 (ENSMMNG00015003976) PBX1 (ENSMMNG00015003937) ENSMMNG00015003901 LMX1A (ENSMMNG00015003875) RXRG (ENSMMNG00015003844) LRRC52 (ENSMMNG00015003822) MGST3 (ENSMMNG00015003802) ENSMMNG00015003777 TMCO1 (ENSMMNG00015003759) UCK2 (ENSMMNG00015003736) Vaquita MODERN SPECIES ENSPSNG00000011319 HSPA6 (ENSPSNG00000011354) ENSPSNG00000011383 ENSPSNG00000011627 FCRLA (ENSPSNG00000011924) FCRLB (ENSPSNG00000012272) DUSP12 (ENSPSNG00000012585) ATF6 (ENSPSNG00000012651) ENSPSNG00000012711 OLFML2B (ENSPSNG00000012744) NOS1AP (ENSPSNG00000012834) C1orf226 (ENSPSNG00000013070) SPATA46 (ENSPSNG00000013155) SH2D1B (ENSPSNG00000013204) UHMK1 (ENSPSNG00000013287) UAP1 (ENSPSNG00000013390) ##22 DDR2 (ENSPSNG00000013548) HSD17B7 (ENSPSNG00000013635) CCDC190 (ENSPSNG00000013717) RGS4 (ENSPSNG00000013819) RGS5 (ENSPSNG00000014041) ENSPSNG00000014109 ENSPSNG00000014131 NUF2 (ENSPSNG00000014212) PBX1 (ENSPSNG00000014373) ENSPSNG00000014637 LMX1A (ENSPSNG00000014698) RXRG (ENSPSNG00000014831) LRRC52 (ENSPSNG00000015078) MGST3 (ENSPSNG00000015120) ENSPSNG00000015151 Sperm whale MODERN SPECIES 15 ENSPCTG00005000737 HSPA6 (ENSPCTG00005000708) FCGR3A (ENSPCTG00005000686) ENSPCTG00005000601 FCRLA (ENSPCTG00005000447) FCRLB (ENSPCTG00005000371) DUSP12 (ENSPCTG00005000321) ATF6 (ENSPCTG00005000304) OLFML2B (ENSPCTG00005000276) NOS1AP (ENSPCTG00005000245) SPATA46 (ENSPCTG00005005206) C1orf226 (ENSPCTG00005005194) SH2D1B (ENSPCTG00005005171) ENSPCTG00005005152 UHMK1 (ENSPCTG00005005114) UHMK1 (ENSPCTG00005005000) ##22 HSD17B7 (ENSPCTG00005004854) CCDC190 (ENSPCTG00005004831) RGS4 (ENSPCTG00005004790) RGS5 (ENSPCTG00005004758) NUF2 (ENSPCTG00005004722) PBX1 (ENSPCTG00005004638) ENSPCTG00005004612 ENSPCTG00005004602 LMX1A (ENSPCTG00005004564) RXRG (ENSPCTG00005004523) LRRC52 (ENSPCTG00005004505) MGST3 (ENSPCTG00005004485) TMCO1 (ENSPCTG00005004388) ENSPCTG00005004343 FMO3 (ENSPCTG00005004320) Blue whale MODERN SPECIES HSPA6 (ENSBMSG00010006809) ENSBMSG00010006826 ENSBMSG00010006867 FCRLA (ENSBMSG00010006982) FCRLB (ENSBMSG00010007153) DUSP12 (ENSBMSG00010007258) ATF6 (ENSBMSG00010007267) ENSBMSG00010007277 OLFML2B (ENSBMSG00010007294) NOS1AP (ENSBMSG00010007318) SPATA46 (ENSBMSG00010007350) ENSBMSG00010007363 ENSBMSG00010007382 ENSBMSG00010007405 UHMK1 (ENSBMSG00010007422) UAP1 (ENSBMSG00010007451) ##22 DDR2 (ENSBMSG00010007502) HSD17B7 (ENSBMSG00010007520) CCDC190 (ENSBMSG00010007562) RGS4 (ENSBMSG00010007582) RGS5 (ENSBMSG00010007671) NUF2 (ENSBMSG00010007687) PBX1 (ENSBMSG00010007714) LMX1A (ENSBMSG00010007743) RXRG (ENSBMSG00010007753) LRRC52 (ENSBMSG00010007774) MGST3 (ENSBMSG00010007783) ENSBMSG00010007800 TMCO1 (ENSBMSG00010007811) UCK2 (ENSBMSG00010007821) FAM78B (ENSBMSG00010007827) Pecora ANCESTRAL SPECIES 2 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000168561 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Percora_a ANCESTRAL SPECIES 1 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000168561 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Bovidae ANCESTRAL SPECIES 1 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000168561.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Bovinae ANCESTRAL SPECIES 1 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.a.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000168561.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Bos ANCESTRAL SPECIES ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.a.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000168561.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Bos_b ANCESTRAL SPECIES 1 ENSGT01050000244808.A.b.a.a.a.a.a.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041.u ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000155477.n ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT01100000263480.a.b.b.a.b.b.b.a.b.b.a ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000168561.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 Cow MODERN SPECIES 22 FCGR2A (ENSBTAG00000038124) HSPA6 (ENSBTAG00000039035) FCGR3A (ENSBTAG00000002096) FCGR2B (ENSBTAG00000021842) FCRLA (ENSBTAG00000034159) FCRLB (ENSBTAG00000014580) DUSP12 (ENSBTAG00000021754) ATF6 (ENSBTAG00000005227) OLFML2B (ENSBTAG00000034147) NOS1AP (ENSBTAG00000010158) SPATA46 (ENSBTAG00000010174) C3H1orf226 (ENSBTAG00000050790) SH2D1B (ENSBTAG00000054194) UHMK1 (ENSBTAG00000012694) ENSBTAG00000001608 UAP1 (ENSBTAG00000010206) ##22 DDR2 (ENSBTAG00000004885) ENSBTAG00000050123 HSD17B7 (ENSBTAG00000005976) CCDC190 (ENSBTAG00000027425) RGS4 (ENSBTAG00000046277) RGS5 (ENSBTAG00000016341) NUF2 (ENSBTAG00000007247) ENSBTAG00000054045 ENSBTAG00000054238 ENSBTAG00000053215 PBX1 (ENSBTAG00000013801) LMX1A (ENSBTAG00000012025) RXRG (ENSBTAG00000016801) LRRC52 (ENSBTAG00000001686) MGST3 (ENSBTAG00000010265) Hybrid Bos Indicus MODERN SPECIES 22 ENSBIXG00005019944 CFAP126 (ENSBIXG00005003269) HSPA6 (ENSBIXG00005020005) ENSBIXG00005007297 ENSBIXG00005020073 FCRLA (ENSBIXG00005020152) FCRLB (ENSBIXG00005003351) ENSBIXG00005020239 ATF6 (ENSBIXG00005020298) OLFML2B (ENSBIXG00005020387) SPATA46 (ENSBIXG00005005741) ENSBIXG00005020503 SH2D1B (ENSBIXG00005020558) UHMK1 (ENSBIXG00005020593) ENSBIXG00005020615 UAP1 (ENSBIXG00005020724) ##22 DDR2 (ENSBIXG00005020871) ENSBIXG00005003536 HSD17B7 (ENSBIXG00005020979) ENSBIXG00005003542 CCDC190 (ENSBIXG00005021019) RGS4 (ENSBIXG00005006600) ENSBIXG00005007356 ENSBIXG00005003576 RGS5 (ENSBIXG00005021199) NUF2 (ENSBIXG00005021236) ENSBIXG00005021294 ENSBIXG00005005540 PBX1 (ENSBIXG00005003636) LMX1A (ENSBIXG00005021672) RXRG (ENSBIXG00005007217) Bos_a ANCESTRAL SPECIES 27 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.a.a.b ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000168561.a Domestic yak MODERN SPECIES 22 ENSBGRG00000001772 ENSBGRG00000001856 HSPA6 (ENSBGRG00000001867) ENSBGRG00000001884 ENSBGRG00000001907 ENSBGRG00000001917 FCRLA (ENSBGRG00000001948) FCRLB (ENSBGRG00000001988) DUSP12 (ENSBGRG00000002021) ATF6 (ENSBGRG00000002089) OLFML2B (ENSBGRG00000002127) ENSBGRG00000002194 SPATA46 (ENSBGRG00000002329) SH2D1B (ENSBGRG00000002346) UHMK1 (ENSBGRG00000002383) UAP1 (ENSBGRG00000002484) ##22 DDR2 (ENSBGRG00000002518) HSD17B7 (ENSBGRG00000002609) CCDC190 (ENSBGRG00000002667) RGS4 (ENSBGRG00000002689) RGS5 (ENSBGRG00000002762) NUF2 (ENSBGRG00000002820) ENSBGRG00000002836 ENSBGRG00000002853 ENSBGRG00000002867 ENSBGRG00000002877 ENSBGRG00000002888 ENSBGRG00000002902 ENSBGRG00000002909 ENSBGRG00000002921 ENSBGRG00000002940 Wild yak MODERN SPECIES 324 ENSBMUG00000012276 SPATA46 (ENSBMUG00000012294) SH2D1B (ENSBMUG00000012310) UHMK1 (ENSBMUG00000012337) UAP1 (ENSBMUG00000012369) ##22 DDR2 (ENSBMUG00000012414) HSD17B7 (ENSBMUG00000012442) CCDC190 (ENSBMUG00000012459) American bison MODERN SPECIES 3260 ENSBBBG00000022469 HSPA6 (ENSBBBG00000022472) ENSBBBG00000022487 ENSBBBG00000022492 ENSBBBG00000005949 FCRLA (ENSBBBG00000022597) FCRLB (ENSBBBG00000005965) DUSP12 (ENSBBBG00000005969) ATF6 (ENSBBBG00000022711) OLFML2B (ENSBBBG00000022749) NOS1AP (ENSBBBG00000022767) SPATA46 (ENSBBBG00000005991) ENSBBBG00000022783 SH2D1B (ENSBBBG00000022793) UHMK1 (ENSBBBG00000022822) UAP1 (ENSBBBG00000022895) ##22 DDR2 (ENSBBBG00000022964) HSD17B7 (ENSBBBG00000022986) CCDC190 (ENSBBBG00000023000) RGS4 (ENSBBBG00000023059) ENSBBBG00000023069 RGS5 (ENSBBBG00000008963) NUF2 (ENSBBBG00000023163) ENSBBBG00000006070 ENSBBBG00000000499 Caprinae ANCESTRAL SPECIES 49 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041.w ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.t ENSGT00390000007598 ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Goat MODERN SPECIES 22 ENSCHIG00000008238 ENSCHIG00000012745 FCRLA (ENSCHIG00000025948) FCRLB (ENSCHIG00000020733) ENSCHIG00000014070 ENSCHIG00000026959 ATF6 (ENSCHIG00000018456) ENSCHIG00000019670 ENSCHIG00000022740 OLFML2B (ENSCHIG00000027176) ENSCHIG00000014253 SPATA46 (ENSCHIG00000022724) SH2D1B (ENSCHIG00000012228) ENSCHIG00000018779 UHMK1 (ENSCHIG00000019078) UAP1 (ENSCHIG00000015675) ##22 DDR2 (ENSCHIG00000022077) HSD17B7 (ENSCHIG00000006708) CCDC190 (ENSCHIG00000016871) RGS4 (ENSCHIG00000025217) RGS5 (ENSCHIG00000022623) NUF2 (ENSCHIG00000021734) ENSCHIG00000010502 ENSCHIG00000027006 ENSCHIG00000000654 ENSCHIG00000024885 ENSCHIG00000019761 LMX1A (ENSCHIG00000022333) RXRG (ENSCHIG00000026695) LRRC52 (ENSCHIG00000022157) ENSCHIG00000010668 Rambouillet Sheep MODERN SPECIES ENSOARG00020000600 ENSOARG00020000623 HSPA6 (ENSOARG00020000639) FCGR3A (ENSOARG00020000656) FCGR2B (ENSOARG00020000691) FCRLA (ENSOARG00020000735) FCRLB (ENSOARG00020000888) DUSP12 (ENSOARG00020000938) ATF6 (ENSOARG00020000954) ENSOARG00020000982 OLFML2B (ENSOARG00020001009) ENSOARG00020001104 SPATA46 (ENSOARG00020001153) SH2D1B (ENSOARG00020001174) UHMK1 (ENSOARG00020001187) UAP1 (ENSOARG00020001261) ##22 DDR2 (ENSOARG00020001363) HSD17B7 (ENSOARG00020001382) CCDC190 (ENSOARG00020001404) RGS4 (ENSOARG00020001430) ENSOARG00020001471 RGS5 (ENSOARG00020001477) NUF2 (ENSOARG00020001492) ENSOARG00020001519 PBX1 (ENSOARG00020001579) LMX1A (ENSOARG00020001833) RXRG (ENSOARG00020001851) ENSOARG00020001878 LRRC52 (ENSOARG00020001888) MGST3 (ENSOARG00020001904) ENSOARG00020001921 Siberian musk deer MODERN SPECIES 167 ENSMMSG00000001355 ENSMMSG00000001323 ENSMMSG00000001289 FCRLA (ENSMMSG00000001056) FCRLB (ENSMMSG00000000915) ENSMMSG00000000884 ENSMMSG00000000856 ENSMMSG00000000834 ATF6 (ENSMMSG00000000815) OLFML2B (ENSMMSG00000000781) SPATA46 (ENSMMSG00000000755) ENSMMSG00000000662 SH2D1B (ENSMMSG00000000630) UHMK1 (ENSMMSG00000000594) UAP1 (ENSMMSG00000000525) ##22 DDR2 (ENSMMSG00000000474) HSD17B7 (ENSMMSG00000000442) CCDC190 (ENSMMSG00000000408) RGS4 (ENSMMSG00000000380) RGS5 (ENSMMSG00000000360) ENSMMSG00000000335 NUF2 (ENSMMSG00000000308) ENSMMSG00000000290 ENSMMSG00000000280 ENSMMSG00000000264 ENSMMSG00000000243 ENSMMSG00000000231 Yarkand deer MODERN SPECIES 12 PCP4L1 (ENSCHYG00000007208) MPZ (ENSCHYG00000007172) ENSCHYG00000007089 CFAP126 (ENSCHYG00000007019) ENSCHYG00000006963 ENSCHYG00000006773 FCRLA (ENSCHYG00000006347) FCRLB (ENSCHYG00000006184) DUSP12 (ENSCHYG00000006142) ENSCHYG00000006110 ATF6 (ENSCHYG00000005942) OLFML2B (ENSCHYG00000005776) SPATA46 (ENSCHYG00000005698) NOS1AP (ENSCHYG00000005636) SH2D1B (ENSCHYG00000005606) UAP1 (ENSCHYG00000005397) ##22 DDR2 (ENSCHYG00000005237) ENSCHYG00000005162 CCDC190 (ENSCHYG00000005115) RGS4 (ENSCHYG00000005067) RGS5 (ENSCHYG00000005022) NUF2 (ENSCHYG00000004983) ENSCHYG00000004964 PBX1 (ENSCHYG00000004877) LMX1A (ENSCHYG00000004832) RXRG (ENSCHYG00000004811) ENSCHYG00000012897 LRRC52 (ENSCHYG00000012879) MGST3 (ENSCHYG00000012749) ALDH9A1 (ENSCHYG00000012639) TMCO1 (ENSCHYG00000012575) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Carnivora ANCESTRAL SPECIES 14 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Caniformia ANCESTRAL SPECIES 10 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Canidae ANCESTRAL SPECIES 36 ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Canis_lupus ANCESTRAL SPECIES 33 ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00900000143287 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659.m ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Dog MODERN SPECIES 31 ENSCAFG00845028843 ENSCAFG00845028772 ENSCAFG00845028724 ENSCAFG00845028677 FCRLA (ENSCAFG00845028307) FCRLB (ENSCAFG00845028077) ENSCAFG00845027945 DUSP12 (ENSCAFG00845027806) ATF6 (ENSCAFG00845027663) OLFML2B (ENSCAFG00845027557) SPATA46 (ENSCAFG00845027511) ENSCAFG00845027342 SH2D1B (ENSCAFG00845027206) ENSCAFG00845027160 UHMK1 (ENSCAFG00845027027) UAP1 (ENSCAFG00845026767) ##22 DDR2 (ENSCAFG00845026475) HSD17B7 (ENSCAFG00845026233) CCDC190 (ENSCAFG00845026143) RGS4 (ENSCAFG00845026010) RGS5 (ENSCAFG00845025929) NUF2 (ENSCAFG00845025722) PBX1 (ENSCAFG00845025355) LMX1A (ENSCAFG00845025098) RXRG (ENSCAFG00845024833) LRRC52 (ENSCAFG00845024741) MGST3 (ENSCAFG00845024662) ENSCAFG00845024594 ENSCAFG00845024557 TMCO1 (ENSCAFG00845024491) UCK2 (ENSCAFG00845024343) Dingo MODERN SPECIES 275 SDHC (ENSCAFG00020001059) CFAP126 (ENSCAFG00020001068) ENSCAFG00020001072 ENSCAFG00020001079 ENSCAFG00020001085 FCRLA (ENSCAFG00020001094) FCRLB (ENSCAFG00020001110) ENSCAFG00020001115 DUSP12 (ENSCAFG00020001123) ATF6 (ENSCAFG00020001288) OLFML2B (ENSCAFG00020001593) ENSCAFG00020001616 SPATA46 (ENSCAFG00020001639) SH2D1B (ENSCAFG00020001642) UHMK1 (ENSCAFG00020001672) UAP1 (ENSCAFG00020001687) ##22 DDR2 (ENSCAFG00020001692) HSD17B7 (ENSCAFG00020001727) ENSCAFG00020001732 RGS4 (ENSCAFG00020001738) RGS5 (ENSCAFG00020001746) NUF2 (ENSCAFG00020001764) ENSCAFG00020001925 ENSCAFG00020001928 ENSCAFG00020001933 LMX1A (ENSCAFG00020001942) RXRG (ENSCAFG00020001975) LRRC52 (ENSCAFG00020001986) ENSCAFG00020001992 ENSCAFG00020002030 ENSCAFG00020002036 Red fox MODERN SPECIES 8 ENSVVUG00000009810 ENSVVUG00000009812 FCGR2B (ENSVVUG00000009816) FCRLA (ENSVVUG00000009820) FCRLB (ENSVVUG00000009827) DUSP12 (ENSVVUG00000009840) ATF6 (ENSVVUG00000009915) OLFML2B (ENSVVUG00000009927) ENSVVUG00000009957 SPATA46 (ENSVVUG00000009973) ENSVVUG00000009977 UHMK1 (ENSVVUG00000009990) UAP1 (ENSVVUG00000010001) ##22 DDR2 (ENSVVUG00000010010) HSD17B7 (ENSVVUG00000010017) CCDC190 (ENSVVUG00000010024) RGS4 (ENSVVUG00000010037) RGS5 (ENSVVUG00000010040) NUF2 (ENSVVUG00000010059) PBX1 (ENSVVUG00000010091) LMX1A (ENSVVUG00000010113) RXRG (ENSVVUG00000010121) LRRC52 (ENSVVUG00000010146) MGST3 (ENSVVUG00000010150) ENSVVUG00000010155 ENSVVUG00000010169 UCK2 (ENSVVUG00000010176) FAM78B (ENSVVUG00000010186) Caniformia_b ANCESTRAL SPECIES 8 ENSGT01030000234556.a.b.b ENSGT00390000000566.k.a ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Ursidae ANCESTRAL SPECIES 4 ENSGT00530000064299.b ENSGT01030000234556.a.b.b ENSGT00390000000566.k.a ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221.b ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 Ursus ANCESTRAL SPECIES 92 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221.b ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000163762.a.a ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d American black bear MODERN SPECIES 5647 UAP1 (ENSUAMG00000026421) ##22 Polar bear MODERN SPECIES 126 ENSUMAG00000022893 ENSUMAG00000022887 FCRLA (ENSUMAG00000022884) ENSUMAG00000022877 DUSP12 (ENSUMAG00000022871) ENSUMAG00000022860 ATF6 (ENSUMAG00000022800) OLFML2B (ENSUMAG00000022785) ENSUMAG00000022780 SPATA46 (ENSUMAG00000022779) C1orf226 (ENSUMAG00000022778) ENSUMAG00000022777 UHMK1 (ENSUMAG00000022774) UAP1 (ENSUMAG00000022772) ##22 DDR2 (ENSUMAG00000022767) HSD17B7 (ENSUMAG00000022765) CCDC190 (ENSUMAG00000022761) RGS4 (ENSUMAG00000022755) RGS5 (ENSUMAG00000022753) NUF2 (ENSUMAG00000022747) ENSUMAG00000022741 PBX1 (ENSUMAG00000022725) LMX1A (ENSUMAG00000022720) RXRG (ENSUMAG00000022718) LRRC52 (ENSUMAG00000022717) MGST3 (ENSUMAG00000022716) ENSUMAG00000022715 ENSUMAG00000022713 TMCO1 (ENSUMAG00000022711) Giant Panda MODERN SPECIES 18 CFAP126 (ENSAMEG00000015344) SDHC (ENSAMEG00000015351) ENSAMEG00000001705 ENSAMEG00000001682 FCRLA (ENSAMEG00000028609) FCRLB (ENSAMEG00000001677) DUSP12 (ENSAMEG00000001663) ENSAMEG00000001657 ATF6 (ENSAMEG00000001631) OLFML2B (ENSAMEG00000001604) NOS1AP (ENSAMEG00000001593) SPATA46 (ENSAMEG00000001601) C1orf226 (ENSAMEG00000026164) ENSAMEG00000001590 UHMK1 (ENSAMEG00000001572) UAP1 (ENSAMEG00000001534) ##22 DDR2 (ENSAMEG00000001491) HSD17B7 (ENSAMEG00000001450) ENSAMEG00000001441 RGS4 (ENSAMEG00000026331) RGS5 (ENSAMEG00000024725) NUF2 (ENSAMEG00000006525) PBX1 (ENSAMEG00000006543) LMX1A (ENSAMEG00000006574) RXRG (ENSAMEG00000006616) LRRC52 (ENSAMEG00000006655) MGST3 (ENSAMEG00000006658) ALDH9A1 (ENSAMEG00000006688) TMCO1 (ENSAMEG00000006712) ENSAMEG00000030407 ENSAMEG00000028227 Mustelinae ANCESTRAL SPECIES 89 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Ferret MODERN SPECIES 191 ENSMPUG00000003452 ENSMPUG00000003458 FCRLA (ENSMPUG00000003467) FCRLB (ENSMPUG00000003470) DUSP12 (ENSMPUG00000003487) ATF6 (ENSMPUG00000003493) ENSMPUG00000003511 ENSMPUG00000003518 OLFML2B (ENSMPUG00000003524) NOS1AP (ENSMPUG00000003532) SPATA46 (ENSMPUG00000003588) ENSMPUG00000003605 UHMK1 (ENSMPUG00000003619) UAP1 (ENSMPUG00000003675) ##22 DDR2 (ENSMPUG00000003733) HSD17B7 (ENSMPUG00000003741) CCDC190 (ENSMPUG00000003748) RGS4 (ENSMPUG00000003752) RGS5 (ENSMPUG00000003758) NUF2 (ENSMPUG00000003765) PBX1 (ENSMPUG00000003773) LMX1A (ENSMPUG00000003787) RXRG (ENSMPUG00000003794) LRRC52 (ENSMPUG00000003807) MGST3 (ENSMPUG00000003817) ALDH9A1 (ENSMPUG00000003853) TMCO1 (ENSMPUG00000003860) UCK2 (ENSMPUG00000003871) FAM78B (ENSMPUG00000003879) American mink MODERN SPECIES 457 ENSNVIG00000024193 ENSNVIG00000024196 FCRLA (ENSNVIG00000024199) FCRLB (ENSNVIG00000024209) DUSP12 (ENSNVIG00000024213) ATF6 (ENSNVIG00000024214) ENSNVIG00000024221 NOS1AP (ENSNVIG00000024223) C1orf226 (ENSNVIG00000024227) SPATA46 (ENSNVIG00000024230) SH2D1B (ENSNVIG00000024231) UHMK1 (ENSNVIG00000024232) UAP1 (ENSNVIG00000024233) ##22 Felidae ANCESTRAL SPECIES 11 ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000164616 ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Panthera ANCESTRAL SPECIES 32 ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000164616 ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Tiger MODERN SPECIES 402 MPZ (ENSPTIG00000011090) SDHC (ENSPTIG00000011614) CFAP126 (ENSPTIG00000014425) ENSPTIG00000015473 ENSPTIG00000015839 FCRLA (ENSPTIG00000017978) FCRLB (ENSPTIG00000020454) DUSP12 (ENSPTIG00000001552) ATF6 (ENSPTIG00000003848) ENSPTIG00000006558 ENSPTIG00000007556 SPATA46 (ENSPTIG00000008323) ENSPTIG00000009765 SH2D1B (ENSPTIG00000010271) UHMK1 (ENSPTIG00000010715) UAP1 (ENSPTIG00000011240) ##22 DDR2 (ENSPTIG00000013569) HSD17B7 (ENSPTIG00000014443) ENSPTIG00000015375 Panthera_a ANCESTRAL SPECIES 47 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000164616 ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b lion MODERN SPECIES 17 ENSPLOG00000014137 ENSPLOG00000014448 ENSPLOG00000014507 ENSPLOG00000014687 FCRLA (ENSPLOG00000014834) FCRLB (ENSPLOG00000015477) DUSP12 (ENSPLOG00000015731) ATF6 (ENSPLOG00000015807) ENSPLOG00000015980 ENSPLOG00000016021 NOS1AP (ENSPLOG00000016056) SPATA46 (ENSPLOG00000016240) C1orf226 (ENSPLOG00000016270) ENSPLOG00000016340 UHMK1 (ENSPLOG00000016372) UAP1 (ENSPLOG00000016423) ##22 DDR2 (ENSPLOG00000016515) HSD17B7 (ENSPLOG00000016646) CCDC190 (ENSPLOG00000016762) RGS4 (ENSPLOG00000016993) RGS5 (ENSPLOG00000017161) NUF2 (ENSPLOG00000017266) PBX1 (ENSPLOG00000017397) LMX1A (ENSPLOG00000017709) RXRG (ENSPLOG00000017780) LRRC52 (ENSPLOG00000017902) MGST3 (ENSPLOG00000017934) ALDH9A1 (ENSPLOG00000017965) TMCO1 (ENSPLOG00000017999) UCK2 (ENSPLOG00000018029) FAM78B (ENSPLOG00000018075) leopard MODERN SPECIES 47 ENSPPRG00000009131 ENSPPRG00000010141 FCRLA (ENSPPRG00000013769) FCRLB (ENSPPRG00000017542) DUSP12 (ENSPPRG00000018306) ENSPPRG00000022356 ATF6 (ENSPPRG00000000895) OLFML2B (ENSPPRG00000001221) NOS1AP (ENSPPRG00000001487) SPATA46 (ENSPPRG00000001803) ENSPPRG00000002500 SH2D1B (ENSPPRG00000002606) UHMK1 (ENSPPRG00000002673) UAP1 (ENSPPRG00000003872) ##22 DDR2 (ENSPPRG00000004150) HSD17B7 (ENSPPRG00000004521) ENSPPRG00000005591 RGS4 (ENSPPRG00000006395) RGS5 (ENSPPRG00000006588) NUF2 (ENSPPRG00000006964) ENSPPRG00000007028 ENSPPRG00000007509 LMX1A (ENSPPRG00000007877) RXRG (ENSPPRG00000007988) LRRC52 (ENSPPRG00000007995) MGST3 (ENSPPRG00000008055) ENSPPRG00000008229 ENSPPRG00000009622 TMCO1 (ENSPPRG00000009653) Cat MODERN SPECIES 248 CFAP126 (ENSFCAG00000015770) FCGR3A (ENSFCAG00000001034) ENSFCAG00000029572 FCGR2B (ENSFCAG00000008160) FCRLA (ENSFCAG00000008164) FCRLB (ENSFCAG00000029830) DUSP12 (ENSFCAG00000008168) ENSFCAG00000034894 ATF6 (ENSFCAG00000045138) ENSFCAG00000050768 OLFML2B (ENSFCAG00000014119) SPATA46 (ENSFCAG00000011128) NOS1AP (ENSFCAG00000014120) ENSFCAG00000046216 UHMK1 (ENSFCAG00000014123) UAP1 (ENSFCAG00000014124) ##22 DDR2 (ENSFCAG00000009163) ENSFCAG00000049643 HSD17B7 (ENSFCAG00000025287) CCDC190 (ENSFCAG00000009378) RGS4 (ENSFCAG00000031433) RGS5 (ENSFCAG00000045953) NUF2 (ENSFCAG00000005528) PBX1 (ENSFCAG00000005533) LMX1A (ENSFCAG00000010758) RXRG (ENSFCAG00000010759) LRRC52 (ENSFCAG00000040033) ALDH9A1 (ENSFCAG00000004312) TMCO1 (ENSFCAG00000029341) MGST3 (ENSFCAG00000004311) UCK2 (ENSFCAG00000024006) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00390000001092 ENSGT00940000163722 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.t ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Chiroptera ANCESTRAL SPECIES 22 ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.t ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Microchiroptera ANCESTRAL SPECIES 22 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00860000135883 ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.t ENSGT00390000007598 ENSGT00940000163577 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Greater horseshoe bat MODERN SPECIES 14 ENSRFEG00010013364 SDHC (ENSRFEG00010013456) CFAP126 (ENSRFEG00010013623) ENSRFEG00010013828 ENSRFEG00010014037 FCRLA (ENSRFEG00010014164) FCRLB (ENSRFEG00010014832) ENSRFEG00010015098 DUSP12 (ENSRFEG00010015152) ATF6 (ENSRFEG00010015185) OLFML2B (ENSRFEG00010015425) ENSRFEG00010015498 SPATA46 (ENSRFEG00010015656) SH2D1B (ENSRFEG00010015711) UHMK1 (ENSRFEG00010015801) UAP1 (ENSRFEG00010015890) ##22 DDR2 (ENSRFEG00010016034) HSD17B7 (ENSRFEG00010016070) ENSRFEG00010016138 RGS4 (ENSRFEG00010016213) RGS5 (ENSRFEG00010016319) NUF2 (ENSRFEG00010016436) PBX1 (ENSRFEG00010016558) LMX1A (ENSRFEG00010016928) RXRG (ENSRFEG00010016975) LRRC52 (ENSRFEG00010017050) ENSRFEG00010017103 ENSRFEG00010017132 TMCO1 (ENSRFEG00010017188) UCK2 (ENSRFEG00010017265) FAM78B (ENSRFEG00010017400) Microbat MODERN SPECIES 1441 SPATA46 (ENSMLUG00000024403) ENSMLUG00000005662 UHMK1 (ENSMLUG00000002872) UAP1 (ENSMLUG00000015520) ##22 DDR2 (ENSMLUG00000005319) HSD17B7 (ENSMLUG00000012048) ENSMLUG00000024294 ENSMLUG00000001868 RGS4 (ENSMLUG00000001720) RGS5 (ENSMLUG00000015842) NUF2 (ENSMLUG00000024147) Megabat MODERN SPECIES 125 UAP1 (ENSPVAG00000014272) ##22 Equus ANCESTRAL SPECIES 75 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000161784.f.b.a ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Donkey MODERN SPECIES 17 PLXNA2 (ENSEASG00005002643) ENSEASG00005002639 ENSEASG00005002625 ENSEASG00005002616 ENSEASG00005002594 ENSEASG00005002577 ENSEASG00005027150 ENSEASG00005002552 ENSEASG00005002525 ENSEASG00005033415 ENSEASG00005026703 ENSEASG00005022816 ENSEASG00005035156 ENSEASG00005033453 UHMK1 (ENSEASG00005022829) UAP1 (ENSEASG00005022831) ##22 DDR2 (ENSEASG00005022832) ENSEASG00005030766 ENSEASG00005038581 ENSEASG00005031513 ENSEASG00005027136 CCDC190 (ENSEASG00005010387) RGS4 (ENSEASG00005031920) RGS5 (ENSEASG00005024804) NUF2 (ENSEASG00005010407) ENSEASG00005010465 ENSEASG00005010469 LMX1A (ENSEASG00005010473) RXRG (ENSEASG00005010475) LRRC52 (ENSEASG00005010476) ENSEASG00005031954 Horse MODERN SPECIES 26 NIT1 (ENSECAG00000000449) KLHDC9 (ENSECAG00000019935) DEDD (ENSECAG00000011248) ARHGAP30 (ENSECAG00000011890) USF1 (ENSECAG00000004755) TSTD1 (ENSECAG00000000506) NECTIN4 (ENSECAG00000016260) F11R (ENSECAG00000018579) ENSECAG00000045874 ENSECAG00000054489 SPATA46 (ENSECAG00000016451) ENSECAG00000016098 ENSECAG00000015500 ENSECAG00000031558 UHMK1 (ENSECAG00000008744) UAP1 (ENSECAG00000054520) ##22 DDR2 (ENSECAG00000010726) HSD17B7 (ENSECAG00000024992) ENSECAG00000019733 ENSECAG00000036612 ENSECAG00000050571 ENSECAG00000048731 CCDC190 (ENSECAG00000024873) RGS4 (ENSECAG00000018261) RGS5 (ENSECAG00000023668) NUF2 (ENSECAG00000009163) PBX1 (ENSECAG00000013058) LMX1A (ENSECAG00000009132) RXRG (ENSECAG00000024377) LRRC52 (ENSECAG00000023465) MGST3 (ENSECAG00000022320) Atlantogenata ANCESTRAL SPECIES 15 ENSGT00530000064299 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608.t.b ENSGT00390000008608.t.a ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Xenarthra ANCESTRAL SPECIES 422 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000173026 ENSGT00940000157757 ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 Sloth MODERN SPECIES 1606 UAP1 (ENSCHOG00000008528) ##22 Armadillo MODERN SPECIES 4033 HSPA6 (ENSDNOG00000036658) ENSDNOG00000037134 ENSDNOG00000031629 ENSDNOG00000008202 ENSDNOG00000034806 FCRLB (ENSDNOG00000035548) DUSP12 (ENSDNOG00000008214) ATF6 (ENSDNOG00000008226) ENSDNOG00000044417 OLFML2B (ENSDNOG00000008474) ENSDNOG00000016598 SPATA46 (ENSDNOG00000041735) ENSDNOG00000042740 ENSDNOG00000042696 UHMK1 (ENSDNOG00000009922) UAP1 (ENSDNOG00000024661) ##22 Afrotheria ANCESTRAL SPECIES 79 ENSGT00530000064299 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340.k ENSGT00390000013340.l ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608.t.b ENSGT00940000163309 ENSGT00390000008608.s ENSGT00940000162687 Afrotheria_a ANCESTRAL SPECIES 83 ENSGT00940000160641 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01050000244808.A.b.a.a.a.b ENSGT01050000244808.A.b.a.a.a.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.u ENSGT00390000007598 ENSGT00510000046975.b.t ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340.k ENSGT00390000013340.l ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608.t.b ENSGT00940000162687 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d Hyrax MODERN SPECIES 3867 UHMK1 (ENSPCAG00000000531) UAP1 (ENSPCAG00000000566) ##22 Elephant MODERN SPECIES 325 NR1I3 (ENSLAFG00000001180) MPZ (ENSLAFG00000022849) SDHC (ENSLAFG00000008270) CFAP126 (ENSLAFG00000022931) FCRLB (ENSLAFG00000006361) ENSLAFG00000012556 ENSLAFG00000000951 FCRLA (ENSLAFG00000008694) DUSP12 (ENSLAFG00000005550) ATF6 (ENSLAFG00000003622) OLFML2B (ENSLAFG00000008905) NOS1AP (ENSLAFG00000018458) SPATA46 (ENSLAFG00000018463) C1orf226 (ENSLAFG00000029908) UHMK1 (ENSLAFG00000007405) UAP1 (ENSLAFG00000007411) ##22 DDR2 (ENSLAFG00000001822) ENSLAFG00000029339 ENSLAFG00000001825 CCDC190 (ENSLAFG00000012498) RGS4 (ENSLAFG00000009641) RGS5 (ENSLAFG00000000531) NUF2 (ENSLAFG00000000533) ENSLAFG00000029919 PBX1 (ENSLAFG00000015741) LMX1A (ENSLAFG00000005114) RXRG (ENSLAFG00000008059) LRRC52 (ENSLAFG00000009139) ENSLAFG00000009103 ENSLAFG00000009105 TMCO1 (ENSLAFG00000015073) Tenrec MODERN SPECIES 1783 UAP1 (ENSETEG00000014862) ##22 Marsupialia ANCESTRAL SPECIES 3 ENSGT00940000159078 ENSGT00940000166568 ENSGT00940000156348.C ENSGT00940000158252 ENSGT01050000244808.A.b.a.a.a.d ENSGT01050000244808.A.b.a.a.a.c ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.r ENSGT00390000007598 ENSGT00940000171984 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000162687 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b Marsupialia_b ANCESTRAL SPECIES 6 ENSGT00940000161169 ENSGT00940000159078 ENSGT00940000166568 ENSGT00940000156348.C ENSGT00940000158252 ENSGT01050000244808.A.b.a.a.a.d ENSGT01050000244808.A.b.a.a.a.c ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.r ENSGT00390000007598 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b ENSGT00940000162904.a.b Diprotodontia ANCESTRAL SPECIES 7 ENSGT00940000161169 ENSGT00940000159078 ENSGT00940000166568 ENSGT00940000156348.C ENSGT00940000158252 ENSGT01050000244808.A.b.a.a.a.d ENSGT01050000244808.A.b.a.a.a.c.b ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.r ENSGT00390000007598 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b ENSGT00940000162904.a.b Diprotodontia_a ANCESTRAL SPECIES 3 ENSGT00940000161169 ENSGT00940000159078 ENSGT00940000166568 ENSGT00940000156348.C ENSGT00940000158252 ENSGT01050000244808.A.b.a.a.a.d ENSGT01050000244808.A.b.a.a.a.c.b ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.D.fb.a ENSGT00930000151041 ENSGT00940000159221 ENSGT00940000157757 ENSGT00510000046975.b.r ENSGT00390000007598 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00390000014067 ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000154374.b ENSGT00940000157774 ENSGT00940000161269 ENSGT00940000156906 ENSGT00390000008608 ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.d ENSGT00390000018059.b ENSGT00940000162904.a.b Common wonbat MODERN SPECIES 1026 ENSVURG00010002021 ENSVURG00010002046 ENSVURG00010002111 FCRLB (ENSVURG00010002122) DUSP12 (ENSVURG00010002132) ATF6 (ENSVURG00010002157) ENSVURG00010002208 OLFML2B (ENSVURG00010002221) ENSVURG00010002244 SPATA46 (ENSVURG00010002259) ENSVURG00010002267 UHMK1 (ENSVURG00010002279) UAP1 (ENSVURG00010002313) ##22 DDR2 (ENSVURG00010002364) HSD17B7 (ENSVURG00010002394) ENSVURG00010002420 RGS4 (ENSVURG00010002438) RGS5 (ENSVURG00010002460) ENSVURG00010002469 PBX1 (ENSVURG00010002505) LMX1A (ENSVURG00010002540) ENSVURG00010002578 ENSVURG00010002587 LRRC52 (ENSVURG00010002610) MGST3 (ENSVURG00010002620) ALDH9A1 (ENSVURG00010002635) TMCO1 (ENSVURG00010002648) UCK2 (ENSVURG00010002670) koala MODERN SPECIES 32 ENSPCIG00000017625 ENSPCIG00000016330 ENSPCIG00000029745 ADGRL4 (ENSPCIG00000026590) ENSPCIG00000012174 ENSPCIG00000012170 ENSPCIG00000016259 FCRLB (ENSPCIG00000016255) DUSP12 (ENSPCIG00000016253) ATF6 (ENSPCIG00000016241) ENSPCIG00000033694 SPATA46 (ENSPCIG00000021503) ENSPCIG00000021501 ENSPCIG00000021505 UHMK1 (ENSPCIG00000021507) UAP1 (ENSPCIG00000021509) ##22 ENSPCIG00000021511 DDR2 (ENSPCIG00000021515) ENSPCIG00000031246 HSD17B7 (ENSPCIG00000021518) ENSPCIG00000033596 RGS4 (ENSPCIG00000036342) RGS5 (ENSPCIG00000021522) PBX1 (ENSPCIG00000027900) LMX1A (ENSPCIG00000027901) RXRG (ENSPCIG00000035780) Wallaby MODERN SPECIES 2613 UAP1 (ENSMEUG00000008912) ##22 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000007312 ENSSHAG00000024851 ENSSHAG00000025951 ENSSHAG00000003908 ENSSHAG00000004270 FCRLB (ENSSHAG00000004693) DUSP12 (ENSSHAG00000028029) ATF6 (ENSSHAG00000005867) ENSSHAG00000023337 OLFML2B (ENSSHAG00000007992) ENSSHAG00000009619 SPATA46 (ENSSHAG00000011920) ENSSHAG00000020806 ENSSHAG00000023655 UHMK1 (ENSSHAG00000012358) UAP1 (ENSSHAG00000012681) ##22 DDR2 (ENSSHAG00000013040) HSD17B7 (ENSSHAG00000014052) ENSSHAG00000014153 RGS4 (ENSSHAG00000015164) RGS5 (ENSSHAG00000015337) ENSSHAG00000026214 ENSSHAG00000012750 LMX1A (ENSSHAG00000014535) RXRG (ENSSHAG00000015367) LRRC52 (ENSSHAG00000016033) MGST3 (ENSSHAG00000016309) ENSSHAG00000016425 TMCO1 (ENSSHAG00000020802) UCK2 (ENSSHAG00000031760) FAM78B (ENSSHAG00000031390) Opossum MODERN SPECIES 1 ENSMODG00000000927 ENSMODG00000000936 FCRLB (ENSMODG00000000945) ENSMODG00000029016 ENSMODG00000029476 ENSMODG00000042379 DUSP12 (ENSMODG00000000962) ATF6 (ENSMODG00000000980) ENSMODG00000043123 ENSMODG00000000995 ENSMODG00000001013 SPATA46 (ENSMODG00000001019) ENSMODG00000041400 ENSMODG00000001024 ENSMODG00000001048 UAP1 (ENSMODG00000001084) ##22 DDR2 (ENSMODG00000001151) ENSMODG00000001090 HSD17B7 (ENSMODG00000001173) ENSMODG00000001176 RGS4 (ENSMODG00000001191) RGS5 (ENSMODG00000001208) ENSMODG00000048722 PBX1 (ENSMODG00000001238) LMX1A (ENSMODG00000001270) RXRG (ENSMODG00000001291) ENSMODG00000040049 ENSMODG00000001296 MGST3 (ENSMODG00000001305) ENSMODG00000001321 TMCO1 (ENSMODG00000001335) Platypus MODERN SPECIES 7 CHD1L (ENSOANG00000003068) BCL9 (ENSOANG00000043707) ENSOANG00000002805 GJA5 (ENSOANG00000008998) GJA8 (ENSOANG00000037589) ENSOANG00000009732 ENSOANG00000009733 PDZK1 (ENSOANG00000009734) DUSP12 (ENSOANG00000046788) ATF6 (ENSOANG00000009735) OLFML2B (ENSOANG00000047415) ENSOANG00000006737 ENSOANG00000043289 ENSOANG00000047114 ENSOANG00000037430 UAP1 (ENSOANG00000015694) ##22 DDR2 (ENSOANG00000010071) ENSOANG00000046194 CASR (ENSOANG00000041729) ENSOANG00000038962 ENSOANG00000036565 ENSOANG00000044955 FBXO40 (ENSOANG00000037008) POLQ (ENSOANG00000004437) STXBP5L (ENSOANG00000004799) ENSOANG00000039503 RABL3 (ENSOANG00000003928) HGD (ENSOANG00000003927) ENSOANG00000005826 NDUFB4 (ENSOANG00000046502) ENSOANG00000038378 Sauria ANCESTRAL SPECIES 7 ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00510000046975.b.p.b ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000160168 ENSGT00940000161063 ENSGT00940000159036 ENSGT00940000157380 Lepidosauria ANCESTRAL SPECIES 62 ENSGT00930000151043 ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00940000167297 ENSGT00940000161339 ENSGT00940000161099.g ENSGT00940000160945 ENSGT00940000161099.h ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 ENSGT00510000047399 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000160168 ENSGT00940000161063 ENSGT00940000157380 Episquamata ANCESTRAL SPECIES 1 ENSGT00930000151043 ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00940000167297 ENSGT00940000161339 ENSGT00940000161099.g ENSGT00940000160945 ENSGT00940000161099.h ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 ENSGT00510000047399 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000161063 ENSGT00940000157380 ENSGT00390000011644 ENSGT00550000074794 ENSGT00520000059630 ENSGT00390000008829 ENSGT00940000155161 ENSGT00390000013877 ENSGT01030000234618.B ENSGT00960000189748 Laterata ANCESTRAL SPECIES 3 ENSGT00940000161099.h ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 ENSGT00510000047399 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000157380 ENSGT00390000011644 ENSGT00550000074794 ENSGT00520000059630 ENSGT00390000008829 ENSGT00940000155161 ENSGT00390000013877 ENSGT01030000234618.B ENSGT00960000189748 ENSGT00940000159554 Common wall lizard MODERN SPECIES 14 DHX9 (ENSPMRG00000000888) ENSPMRG00000000960 RGS8 (ENSPMRG00000001004) ENSPMRG00000001025 RNASEL (ENSPMRG00000001048) RGSL1 (ENSPMRG00000001069) GLUL (ENSPMRG00000001108) ENSPMRG00000001146 PRRC2C (ENSPMRG00000001225) ENSPMRG00000001490 ENSPMRG00000001496 MYOC (ENSPMRG00000001520) VAMP4 (ENSPMRG00000001558) ITPA (ENSPMRG00000001594) METTL13 (ENSPMRG00000001612) UAP1 (ENSPMRG00000001629) ##22 DDR2 (ENSPMRG00000001648) HSD17B7 (ENSPMRG00000001665) OLFML2B (ENSPMRG00000001675) ENSPMRG00000001689 RGS5 (ENSPMRG00000001707) TADA1 (ENSPMRG00000001717) PRDX6 (ENSPMRG00000001734) ANKRD45 (ENSPMRG00000001756) ENSPMRG00000001775 KLHL20 (ENSPMRG00000001784) CENPL (ENSPMRG00000001798) DARS2 (ENSPMRG00000001832) ENSPMRG00000001954 ZBTB37 (ENSPMRG00000001995) SERPINC1 (ENSPMRG00000002006) Argentine black and white tegu MODERN SPECIES 17 KIAA1614 (ENSSMRG00000011209) XPR1 (ENSSMRG00000011166) ACBD6 (ENSSMRG00000011157) LHX4 (ENSSMRG00000011116) QSOX1 (ENSSMRG00000011087) CEP350 (ENSSMRG00000011085) TOR1AIP1 (ENSSMRG00000011041) TOR1AIP2 (ENSSMRG00000011040) ENSSMRG00000011039 FAM163A (ENSSMRG00000011038) TDRD5 (ENSSMRG00000010979) NPHS2 (ENSSMRG00000010978) ENSSMRG00000010977 ITPA (ENSSMRG00000010942) METTL13 (ENSSMRG00000010939) UAP1 (ENSSMRG00000010935) ##22 DDR2 (ENSSMRG00000010930) HSD17B7 (ENSSMRG00000010927) ENSSMRG00000010919 OLFML2B (ENSSMRG00000010897) ATF6 (ENSSMRG00000010890) ENSSMRG00000010886 ENSSMRG00000010879 ENSSMRG00000010878 RGS5 (ENSSMRG00000010843) TADA1 (ENSSMRG00000010838) PRDX6 (ENSSMRG00000010834) ENSSMRG00000010832 ANKRD45 (ENSSMRG00000010829) KLHL20 (ENSSMRG00000010827) CENPL (ENSSMRG00000010825) Toxicofera ANCESTRAL SPECIES 1 ENSGT00930000151043 ENSGT00390000003574 ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT00940000167297 ENSGT00940000161339 ENSGT00940000161099.g ENSGT00940000160945 ENSGT00940000161099.h ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 ENSGT00510000047399 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000160168 ENSGT00940000161063 ENSGT00940000157380 ENSGT00390000011644 ENSGT00550000074794 ENSGT00390000008829 ENSGT00940000155161 ENSGT00390000013877 ENSGT01030000234618.B ENSGT00960000189748 Elapidae ANCESTRAL SPECIES 1 ENSGT00390000004791 ENSGT00930000151043 ENSGT00390000003574 ENSGT00390000014886 ENSGT00940000159466 ENSGT00940000167297 ENSGT00940000161339.c ENSGT00940000161099.g ENSGT00940000160945.a ENSGT00940000161099.h ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 ENSGT00510000047399 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000160168 ENSGT00940000161063 ENSGT00940000157380 ENSGT00390000011644 ENSGT00550000074794 ENSGT00390000008829 ENSGT00940000155161 ENSGT00390000013877 ENSGT01030000234618.B ENSGT00960000189748 Indian cobra MODERN SPECIES 2 SCYL3 (ENSNNAG00000003103) C1orf112 (ENSNNAG00000003016) KIFAP3 (ENSNNAG00000002965) GORAB (ENSNNAG00000002944) PRRX1 (ENSNNAG00000002935) ENSNNAG00000002893 FMO3 (ENSNNAG00000002863) FMO2 (ENSNNAG00000002856) FMO1 (ENSNNAG00000002849) ENSNNAG00000002842 PRRC2C (ENSNNAG00000002426) MYOC (ENSNNAG00000002298) VAMP4 (ENSNNAG00000002284) ITPA (ENSNNAG00000002275) METTL13 (ENSNNAG00000002251) UAP1 (ENSNNAG00000002213) ##22 DDR2 (ENSNNAG00000002186) HSD17B7 (ENSNNAG00000002158) OLFML2B (ENSNNAG00000002130) ATF6 (ENSNNAG00000002075) ENSNNAG00000001997 RGS5 (ENSNNAG00000001961) TADA1 (ENSNNAG00000001942) PRDX6 (ENSNNAG00000001925) ANKRD45 (ENSNNAG00000001904) KLHL20 (ENSNNAG00000001872) CENPL (ENSNNAG00000001856) DARS2 (ENSNNAG00000000860) ZBTB37 (ENSNNAG00000000726) SERPINC1 (ENSNNAG00000017154) RC3H1 (ENSNNAG00000017143) Elapidae_a ANCESTRAL SPECIES 32 ENSGT00390000004791.i ENSGT00930000151043 ENSGT00390000003574 ENSGT00390000014886 ENSGT00940000159466 ENSGT00940000167297.b ENSGT00940000161339.c ENSGT00940000161099.g ENSGT00940000160945.a ENSGT00940000161099.h ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 ENSGT00510000047399 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000160168 ENSGT00940000161063 ENSGT00940000157380 ENSGT00390000011644 ENSGT00550000074794 ENSGT00390000008829 ENSGT00940000155161 ENSGT00390000013877 ENSGT01030000234618.B ENSGT00960000189748 Acanthophiinae ANCESTRAL SPECIES 33 ENSGT00390000004791.i ENSGT00930000151043 ENSGT00390000003574 ENSGT00390000014886 ENSGT00940000159466 ENSGT00940000167297.b ENSGT00940000161339.c ENSGT00940000161099.g ENSGT00940000160945.a ENSGT00940000161099.h ENSGT00950000183161.b ENSGT00940000158561 ENSGT00940000155005 ENSGT00390000015399 ENSGT00510000047399 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000160168 ENSGT00940000161063 ENSGT00940000157380 ENSGT00390000011644 ENSGT00550000074794 ENSGT00390000008829 ENSGT00940000155161 ENSGT00390000013877 ENSGT01030000234618.B ENSGT00960000189748 Mainland tiger snake MODERN SPECIES 312 PRRC2C (ENSNSUG00000010318) MYOC (ENSNSUG00000011092) VAMP4 (ENSNSUG00000011094) ITPA (ENSNSUG00000011096) METTL13 (ENSNSUG00000011097) UAP1 (ENSNSUG00000011099) ##22 DDR2 (ENSNSUG00000011122) ENSNSUG00000011124 OLFML2B (ENSNSUG00000011128) ENSNSUG00000011130 ENSNSUG00000011132 Eastern brown snake MODERN SPECIES 21 C1orf112 (ENSPTXG00000004370) SCYL3 (ENSPTXG00000004368) KIFAP3 (ENSPTXG00000004367) GORAB (ENSPTXG00000004366) PRRX1 (ENSPTXG00000004365) ENSPTXG00000004364 FMO3 (ENSPTXG00000004363) FMO2 (ENSPTXG00000004361) FMO1 (ENSPTXG00000004360) ENSPTXG00000004359 PRRC2C (ENSPTXG00000004355) MYOC (ENSPTXG00000004354) VAMP4 (ENSPTXG00000004352) ITPA (ENSPTXG00000004351) METTL13 (ENSPTXG00000004350) UAP1 (ENSPTXG00000004349) ##22 DDR2 (ENSPTXG00000004348) HSD17B7 (ENSPTXG00000004347) ENSPTXG00000004346 OLFML2B (ENSPTXG00000004345) ATF6 (ENSPTXG00000004344) ENSPTXG00000004343 ENSPTXG00000004342 RGS5 (ENSPTXG00000004341) TADA1 (ENSPTXG00000004340) PRDX6 (ENSPTXG00000004339) ANKRD45 (ENSPTXG00000004338) KLHL20 (ENSPTXG00000004337) CENPL (ENSPTXG00000004336) DARS2 (ENSPTXG00000003910) ZBTB37 (ENSPTXG00000003897) Blue-lipped sea krait MODERN SPECIES 9978 UAP1 (ENSLLTG00000012673) ##22 Lizard MODERN SPECIES 914 ENSACAG00000036387 FMO2 (ENSACAG00000013187) ENSACAG00000013117 ENSACAG00000013020 GORAB (ENSACAG00000013005) NTMT2 (ENSACAG00000012993) KIFAP3 (ENSACAG00000012884) SCYL3 (ENSACAG00000012830) ENSACAG00000034894 ENSACAG00000036834 ENSACAG00000012783 PRRC2C (ENSACAG00000029194) VAMP4 (ENSACAG00000012702) ENSACAG00000012674 METTL13 (ENSACAG00000012638) UAP1 (ENSACAG00000012562) ##22 ENSACAG00000012439 HSD17B7 (ENSACAG00000012384) NPHS2 (ENSACAG00000012336) ENSACAG00000012335 SOAT1 (ENSACAG00000028257) ENSACAG00000012264 ENSACAG00000012151 FAM20B (ENSACAG00000013109) ENSACAG00000022838 ANGPTL1 (ENSACAG00000013089) RALGPS2 (ENSACAG00000012902) ENSACAG00000036805 RASAL2 (ENSACAG00000012811) ENSACAG00000012790 SEC16B (ENSACAG00000012601) tuatara MODERN SPECIES 133 KIFAP3 (ENSSPUG00000013756) NTMT2 (ENSSPUG00000014727) ENSSPUG00000014737 PRRX1 (ENSSPUG00000014750) ENSSPUG00000014765 FMO3 (ENSSPUG00000014792) ENSSPUG00000014847 FMO1 (ENSSPUG00000014892) PRRC2C (ENSSPUG00000014912) ENSSPUG00000014944 ENSSPUG00000014948 ENSSPUG00000014958 ENSSPUG00000014968 ITPA (ENSSPUG00000014977) METTL13 (ENSSPUG00000014997) UAP1 (ENSSPUG00000015046) ##22 ENSSPUG00000015088 DDR2 (ENSSPUG00000015102) HSD17B7 (ENSSPUG00000015129) ENSSPUG00000015144 ENSSPUG00000015148 ENSSPUG00000015155 ENSSPUG00000015198 MRPL28 (ENSSPUG00000015322) Archelosauria ANCESTRAL SPECIES 9 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000160168 ENSGT00940000159036 ENSGT00940000157380 Archosauria ANCESTRAL SPECIES 27 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00390000007598 ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000161063 Aves ANCESTRAL SPECIES 7 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000161063 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT01040000241718 ENSGT00940000157937 Neognathae ANCESTRAL SPECIES 8 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000161063 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT01040000241718 ENSGT00940000157937 Neognathae_b ANCESTRAL SPECIES 10 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000161063 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT01040000241718 ENSGT00940000157937 Neognathae_c ANCESTRAL SPECIES 7 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT01040000241718 ENSGT00940000157937 ENSGT00940000155195 Kakapo MODERN SPECIES 25 PHGDH (ENSSHBG00005005502) HMGCS2 (ENSSHBG00005005589) ENSSHBG00005005608 NOTCH2 (ENSSHBG00005006669) SEC22B (ENSSHBG00005018280) PACS2 (ENSSHBG00005018285) MTA1 (ENSSHBG00005018289) CRIP2 (ENSSHBG00005018294) CRIP1 (ENSSHBG00005018297) TEDC1 (ENSSHBG00005018300) TMEM121 (ENSSHBG00005018303) ENSSHBG00005018306 SPATA46 (ENSSHBG00005018309) ENSSHBG00005018311 UHMK1 (ENSSHBG00005018314) UAP1 (ENSSHBG00005018318) ##22 DDR2 (ENSSHBG00005018322) HSD17B7 (ENSSHBG00005018325) OLFML2B (ENSSHBG00005018329) ATF6 (ENSSHBG00005018332) ENSSHBG00005018338 ENSSHBG00005018341 HTATIP2 (ENSSHBG00005018343) RGS5 (ENSSHBG00005018346) RGS4 (ENSSHBG00005018348) RGS18 (ENSSHBG00005018351) RGS21 (ENSSHBG00005018353) PXYLP1 (ENSSHBG00005018355) PDC (ENSSHBG00005018362) PTGS2 (ENSSHBG00005018365) PLA2G4A (ENSSHBG00005018368) Golden eagle MODERN SPECIES 3 PHGDH (ENSACCG00020016168) HMGCS2 (ENSACCG00020016155) REG4 (ENSACCG00020016143) NOTCH2 (ENSACCG00020015594) SEC22B (ENSACCG00020014855) PACS2 (ENSACCG00020014813) MTA1 (ENSACCG00020014761) CRIP2 (ENSACCG00020014742) CRIP1 (ENSACCG00020014733) TEDC1 (ENSACCG00020014715) TMEM121 (ENSACCG00020014698) SPATA46 (ENSACCG00020014688) ENSACCG00020014674 ENSACCG00020014657 UHMK1 (ENSACCG00020014642) UAP1 (ENSACCG00020014625) ##22 DDR2 (ENSACCG00020014598) HSD17B7 (ENSACCG00020014578) OLFML2B (ENSACCG00020014565) ATF6 (ENSACCG00020014542) ENSACCG00020014486 ENSACCG00020014454 HTATIP2 (ENSACCG00020014439) RGS5 (ENSACCG00020014426) RGS4 (ENSACCG00020014415) RGS18 (ENSACCG00020014385) RGS21 (ENSACCG00020014376) RGS1 (ENSACCG00020014364) ENSACCG00020014349 ENSACCG00020014334 LSM7 (ENSACCG00020014318) Passeriformes ANCESTRAL SPECIES 8 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT01040000240999 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000168828 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000161063 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT00940000157937 Passeriformes_d ANCESTRAL SPECIES 9 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT01040000240999 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000168828 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT00940000157937 Passeriformes_g ANCESTRAL SPECIES 41 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT01040000240999 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000168828 ENSGT01040000244588 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT00940000157937 ENSGT00950000183155.a.b.b.j.a Passeroidea ANCESTRAL SPECIES 40 ENSGT00950000183190.a.a.b ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT01040000240999 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000168828 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT00940000157937 ENSGT00950000183155.a.b.b.j.a Common canary MODERN SPECIES 94 TMEM121 (ENSSCAG00000017257) ENSSCAG00000017259 ENSSCAG00000017263 UHMK1 (ENSSCAG00000017266) UAP1 (ENSSCAG00000017278) ##22 DDR2 (ENSSCAG00000017287) HSD17B7 (ENSSCAG00000017291) OLFML2B (ENSSCAG00000017295) ATF6 (ENSSCAG00000017298) ENSSCAG00000017301 ENSSCAG00000017302 HTATIP2 (ENSSCAG00000017303) RGS5 (ENSSCAG00000017305) RGS4 (ENSSCAG00000017306) RGS18 (ENSSCAG00000017307) RGS21 (ENSSCAG00000017309) RGS1 (ENSSCAG00000000999) ENSSCAG00000001004 RGS2 (ENSSCAG00000001015) ENSSCAG00000001028 Medium ground finch MODERN SPECIES 124 PDE4DIP (ENSGFOG00000010333) PHGDH (ENSGFOG00000010318) HMGCS2 (ENSGFOG00000010314) ENSGFOG00000010309 NOTCH2 (ENSGFOG00000009054) PACS2 (ENSGFOG00000013363) MTA1 (ENSGFOG00000012922) CRIP2 (ENSGFOG00000012890) CRIP1 (ENSGFOG00000012885) TEDC1 (ENSGFOG00000012882) TMEM121 (ENSGFOG00000012880) ENSGFOG00000012879 ENSGFOG00000012875 ENSGFOG00000012870 UHMK1 (ENSGFOG00000012866) UAP1 (ENSGFOG00000012862) ##22 DDR2 (ENSGFOG00000012852) HSD17B7 (ENSGFOG00000012847) OLFML2B (ENSGFOG00000012843) ATF6 (ENSGFOG00000012818) ENSGFOG00000012760 ENSGFOG00000012740 ENSGFOG00000012736 RGS5 (ENSGFOG00000012734) RGS4 (ENSGFOG00000012733) RGS18 (ENSGFOG00000012730) RGS21 (ENSGFOG00000012726) RGS1 (ENSGFOG00000012719) ENSGFOG00000012714 RGS2 (ENSGFOG00000012712) ENSGFOG00000012702 Flycatcher MODERN SPECIES 27 ENSFALG00000025163 SEC22B (ENSFALG00000003606) PACS2 (ENSFALG00000003599) ENSFALG00000023096 MTA1 (ENSFALG00000003592) CRIP2 (ENSFALG00000028733) ENSFALG00000023674 ENSFALG00000026183 CRIP1 (ENSFALG00000026248) ENSFALG00000003562 TMEM121 (ENSFALG00000014517) ENSFALG00000003550 ENSFALG00000027377 ENSFALG00000024755 UHMK1 (ENSFALG00000025386) UAP1 (ENSFALG00000003533) ##22 DDR2 (ENSFALG00000003523) HSD17B7 (ENSFALG00000003516) ENSFALG00000003509 ENSFALG00000026032 ENSFALG00000003474 ENSFALG00000003469 ENSFALG00000003462 ENSFALG00000003444 RGS18 (ENSFALG00000023309) RGS21 (ENSFALG00000025807) RGS1 (ENSFALG00000003421) ENSFALG00000023895 RGS2 (ENSFALG00000003405) BRINP3 (ENSFALG00000003394) ENSFALG00000023271 Great tit MODERN SPECIES 268 ENSPMJG00000006515 UAP1 (ENSPMJG00000006521) ##22 DDR2 (ENSPMJG00000006536) HSD17B7 (ENSPMJG00000006540) OLFML2B (ENSPMJG00000006543) ATF6 (ENSPMJG00000006546) ENSPMJG00000006550 ENSPMJG00000006572 HTATIP2 (ENSPMJG00000006573) RGS5 (ENSPMJG00000006576) RGS4 (ENSPMJG00000006577) RGS18 (ENSPMJG00000006581) RGS21 (ENSPMJG00000006582) RGS1 (ENSPMJG00000006583) RGS13 (ENSPMJG00000006584) RGS2 (ENSPMJG00000006585) Galloanserae ANCESTRAL SPECIES 8 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000007598 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT00940000157937 ENSGT00940000155195 ENSGT00390000006200 Anatidae ANCESTRAL SPECIES 5 ENSGT00390000006096.a.a ENSGT01040000240999 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00940000164616 ENSGT00390000007598 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000157937 ENSGT00940000155195 ENSGT00390000006200 ENSGT00940000162420 Pink-footed goose MODERN SPECIES 84 ENSABRG00000022939 PHGDH (ENSABRG00000022940) HMGCS2 (ENSABRG00000022941) NOTCH2 (ENSABRG00000022942) SEC22B (ENSABRG00000022943) PACS2 (ENSABRG00000022944) ENSABRG00000022945 MTA1 (ENSABRG00000022946) CRIP2 (ENSABRG00000022947) CRIP1 (ENSABRG00000022948) TEDC1 (ENSABRG00000022949) TMEM121 (ENSABRG00000022951) ENSABRG00000022954 ENSABRG00000022955 UHMK1 (ENSABRG00000022956) UAP1 (ENSABRG00000022957) ##22 DDR2 (ENSABRG00000022958) HSD17B7 (ENSABRG00000022959) OLFML2B (ENSABRG00000022960) ATF6 (ENSABRG00000022961) ENSABRG00000022962 ENSABRG00000022964 RGS5 (ENSABRG00000022965) RGS4 (ENSABRG00000022966) RGS18 (ENSABRG00000022968) RGS21 (ENSABRG00000022969) RGS1 (ENSABRG00000022970) RGS2 (ENSABRG00000022972) UCHL5 (ENSABRG00000022973) RO60 (ENSABRG00000022974) GLRX2 (ENSABRG00000022975) Duck MODERN SPECIES 26 PHGDH (ENSAPLG00000027527) ENSAPLG00000031083 HMGCS2 (ENSAPLG00000016193) NOTCH2 (ENSAPLG00000015861) SEC22B (ENSAPLG00000015847) PACS2 (ENSAPLG00000015577) MTA1 (ENSAPLG00000015316) CRIP2 (ENSAPLG00000015110) CRIP1 (ENSAPLG00000014982) TEDC1 (ENSAPLG00000014968) TMEM121 (ENSAPLG00000013683) ENSAPLG00000014905 ENSAPLG00000023414 SPATA46 (ENSAPLG00000025054) UHMK1 (ENSAPLG00000014799) UAP1 (ENSAPLG00000014521) ##22 DDR2 (ENSAPLG00000014258) HSD17B7 (ENSAPLG00000014241) OLFML2B (ENSAPLG00000014054) ATF6 (ENSAPLG00000013950) ENSAPLG00000013340 ENSAPLG00000028091 HTATIP2 (ENSAPLG00000016049) RGS5 (ENSAPLG00000016064) RGS4 (ENSAPLG00000000572) RGS18 (ENSAPLG00000002011) RGS21 (ENSAPLG00000002310) RGS1 (ENSAPLG00000002313) RGS2 (ENSAPLG00000002397) UCHL5 (ENSAPLG00000002704) RO60 (ENSAPLG00000003121) Phasianidae ANCESTRAL SPECIES 7 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00940000168828 ENSGT00510000046975.b.q ENSGT01070000257182 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00390000010118 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT00940000157937 ENSGT00940000155195 ENSGT00390000006200 Japanese quail MODERN SPECIES 26 ENSCJPG00005021294 ENSCJPG00005021293 ENSCJPG00005021292 HMGCS2 (ENSCJPG00005021290) NOTCH2 (ENSCJPG00005021260) SEC22B (ENSCJPG00005021243) PACS2 (ENSCJPG00005021231) MTA1 (ENSCJPG00005021230) CRIP2 (ENSCJPG00005021229) CRIP1 (ENSCJPG00005021228) TEDC1 (ENSCJPG00005021227) TMEM121 (ENSCJPG00005021226) ENSCJPG00005021225 ENSCJPG00005021224 UHMK1 (ENSCJPG00005021223) UAP1 (ENSCJPG00005021222) ##22 DDR2 (ENSCJPG00005021220) HSD17B7 (ENSCJPG00005021219) OLFML2B (ENSCJPG00005021218) ATF6 (ENSCJPG00005021217) ENSCJPG00005021216 ENSCJPG00005021215 ENSCJPG00005021214 HTATIP2 (ENSCJPG00005021213) RGS5 (ENSCJPG00005021212) RGS4 (ENSCJPG00005021211) RGS18 (ENSCJPG00005021210) RGS21 (ENSCJPG00005021209) RGS1 (ENSCJPG00005021208) RGS13 (ENSCJPG00005021207) RGS2 (ENSCJPG00005021206) Phasianidae_b ANCESTRAL SPECIES 7 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00940000168828 ENSGT00510000046975.b.q ENSGT01070000257182 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00390000008184 ENSGT00940000157380 ENSGT00940000159036 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT00940000157937 ENSGT00940000155195 ENSGT00390000006200 ENSGT00940000162420 Chicken MODERN SPECIES 37 PHGDH (ENSGALG00010013380) HMGCS2 (ENSGALG00010013346) REG4 (ENSGALG00010013342) NOTCH2 (ENSGALG00010013323) SEC22B (ENSGALG00010013282) PACS2 (ENSGALG00010013265) MTA1 (ENSGALG00010013251) CRIP2 (ENSGALG00010013212) CRIP1 (ENSGALG00010013158) TEDC1 (ENSGALG00010013144) TMEM121 (ENSGALG00010013137) ENSGALG00010013056 ENSGALG00010013044 ENSGALG00010013036 UHMK1 (ENSGALG00010013027) UAP1 (ENSGALG00010013004) ##22 DDR2 (ENSGALG00010012982) HSD17B7 (ENSGALG00010012978) OLFML2B (ENSGALG00010012958) ATF6 (ENSGALG00010012932) ENSGALG00010012915 HTATIP2 (ENSGALG00010012869) ENSGALG00010012851 RGS5 (ENSGALG00010012829) RGS18 (ENSGALG00010012818) RGS21 (ENSGALG00010012806) RGS1 (ENSGALG00010012788) RGS13 (ENSGALG00010012783) RGS4 (ENSGALG00010012749) RGS2 (ENSGALG00010012714) UCHL5 (ENSGALG00010012693) Turkey MODERN SPECIES 1 ENSMGAG00000021120 UCHL5 (ENSMGAG00000005403) RGS2 (ENSMGAG00000005380) ENSMGAG00000005362 ENSMGAG00000019900 ENSMGAG00000005230 ENSMGAG00000005233 ENSMGAG00000020422 ENSMGAG00000005338 ENSMGAG00000005358 ENSMGAG00000005296 ENSMGAG00000005162 ENSMGAG00000005185 ENSMGAG00000005095 ENSMGAG00000005133 UAP1 (ENSMGAG00000005073) ##22 ENSMGAG00000005043 ENSMGAG00000005025 ENSMGAG00000005039 ENSMGAG00000005017 ENSMGAG00000018164 ENSMGAG00000021550 ENSMGAG00000017246 ENSMGAG00000004954 ENSMGAG00000004786 ENSMGAG00000004881 ENSMGAG00000004771 ENSMGAG00000021888 ENSMGAG00000004553 ENSMGAG00000004570 ENSMGAG00000004592 African ostrich MODERN SPECIES 434 IWS1 (ENSSCUG00000009716) ENSSCUG00000009724 ENSSCUG00000009725 DGKD (ENSSCUG00000009727) SAG (ENSSCUG00000009735) ATG16L1 (ENSSCUG00000009744) INPP5D (ENSSCUG00000009749) NEU2 (ENSSCUG00000009751) NGEF (ENSSCUG00000009754) GIGYF2 (ENSSCUG00000009792) KCNJ13 (ENSSCUG00000009831) ENSSCUG00000009834 TMEM121 (ENSSCUG00000009837) ENSSCUG00000009840 UHMK1 (ENSSCUG00000009842) UAP1 (ENSSCUG00000009849) ##22 DDR2 (ENSSCUG00000009859) HSD17B7 (ENSSCUG00000009860) OLFML2B (ENSSCUG00000009861) ATF6 (ENSSCUG00000009863) ENSSCUG00000009864 ENSSCUG00000009865 HTATIP2 (ENSSCUG00000009867) RGS5 (ENSSCUG00000009868) RGS2 (ENSSCUG00000009869) RGS4 (ENSSCUG00000009871) RGS18 (ENSSCUG00000009873) RGS21 (ENSSCUG00000009875) RGS1 (ENSSCUG00000009876) RGS13 (ENSSCUG00000009881) UCHL5 (ENSSCUG00000009886) Australian saltwater crocodile MODERN SPECIES 28 PHGDH (ENSCPRG00005003122) HMGCS2 (ENSCPRG00005003094) ENSCPRG00005003091 ENSCPRG00005003087 NOTCH2 (ENSCPRG00005001488) SEC22B (ENSCPRG00005001287) PACS2 (ENSCPRG00005001267) MTA1 (ENSCPRG00005001248) CRIP2 (ENSCPRG00005001228) CRIP1 (ENSCPRG00005001226) TEDC1 (ENSCPRG00005001201) TMEM121 (ENSCPRG00005001148) SPATA46 (ENSCPRG00005001118) ENSCPRG00005001113 UHMK1 (ENSCPRG00005001107) UAP1 (ENSCPRG00005001099) ##22 DDR2 (ENSCPRG00005001059) HSD17B7 (ENSCPRG00005001052) OLFML2B (ENSCPRG00005001039) ATF6 (ENSCPRG00005001010) RGS21 (ENSCPRG00005000977) ENSCPRG00005000962 RGS1 (ENSCPRG00005000959) RGS13 (ENSCPRG00005000957) ENSCPRG00005000954 RGS2 (ENSCPRG00005000953) UCHL5 (ENSCPRG00005000938) RO60 (ENSCPRG00005000924) GLRX2 (ENSCPRG00005000920) B3GALT2 (ENSCPRG00005000918) CDC73 (ENSCPRG00005000909) Cryptodira ANCESTRAL SPECIES 8 ENSGT00390000006096.a.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00510000046975.b.p.b ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000161063 ENSGT00940000159036 ENSGT00940000157380 Testudinoidea ANCESTRAL SPECIES 5 ENSGT00390000006096.a.a ENSGT00940000155030 ENSGT00940000156349 ENSGT00950000183209.b.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a ENSGT00940000158683.b ENSGT00940000162342 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00510000046975.b.p.b ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000161063.b ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000160403 ENSGT00940000181346 ENSGT00690000103768 ENSGT00390000002137 ENSGT00940000155521 ENSGT00940000164810 ENSGT00940000158869 Emydidae ANCESTRAL SPECIES 11 ENSGT00510000046975.b.p.b ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000160168 ENSGT00940000161063.b ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000160403 ENSGT00390000002137 ENSGT00940000155521 ENSGT00940000164810 ENSGT00940000158869 ENSGT00510000046732.B ENSGT00940000160541 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 99 ENSTMTG00000006821 ENSTMTG00000006788 ENSTMTG00000006780 ENSTMTG00000005012 ENSTMTG00000004791 ENSTMTG00000004645 ENSTMTG00000003429 ENSTMTG00000003278 ENSTMTG00000003218 ENSTMTG00000003204 ENSTMTG00000003196 ENSTMTG00000003168 ENSTMTG00000003148 ENSTMTG00000003131 ENSTMTG00000003114 ENSTMTG00000003100 ##22 ENSTMTG00000021854 ENSTMTG00000021835 ENSTMTG00000021828 CCDC190 (ENSTMTG00000021820) ENSTMTG00000021816 ENSTMTG00000021793 ENSTMTG00000021763 ENSTMTG00000021747 ENSTMTG00000021741 Three-toed box turtle MODERN SPECIES 97 ENSTMTG00000019952 ENSTMTG00000019942 ENSTMTG00000014264 ENSTMTG00000013777 ENSTMTG00000013707 ENSTMTG00000008560 ENSTMTG00000008227 ENSTMTG00000008196 ENSTMTG00000008183 ENSTMTG00000008174 ENSTMTG00000008159 ENSTMTG00000008146 SPATA46 (ENSTMTG00000008141) ENSTMTG00000008130 ENSTMTG00000008120 ENSTMTG00000008089 ##22 ENSTMTG00000007570 ENSTMTG00000007504 ENSTMTG00000007441 ENSTMTG00000007417 ENSTMTG00000007337 ENSTMTG00000007317 ENSTMTG00000007294 painted turtle MODERN SPECIES 1028 ENSCPBG00000017977 SPATA46 (ENSCPBG00000017975) ENSCPBG00000017973 UHMK1 (ENSCPBG00000017971) UAP1 (ENSCPBG00000017966) ##22 DDR2 (ENSCPBG00000017962) HSD17B7 (ENSCPBG00000017958) Testudinidae ANCESTRAL SPECIES 16 ENSGT00390000003866.a.b ENSGT00510000046975.b.q ENSGT00390000007598 ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00990000207018 ENSGT00940000157757 ENSGT00940000159221 ENSGT00940000161063.b ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000160403 ENSGT00940000181346 ENSGT00690000103768 ENSGT00390000002137 ENSGT00940000155521 ENSGT00940000164810 ENSGT00940000158869 Goode s thornscrub tortoise MODERN SPECIES 22 ENSGEVG00005006836 PHGDH (ENSGEVG00005006807) HMGCS2 (ENSGEVG00005006695) NOTCH2 (ENSGEVG00005005781) SEC22B (ENSGEVG00005005497) PACS2 (ENSGEVG00005005436) MTA1 (ENSGEVG00005005055) CRIP2 (ENSGEVG00005004907) CRIP1 (ENSGEVG00005004878) ENSGEVG00005004856 ENSGEVG00005004835 ENSGEVG00005004767 SPATA46 (ENSGEVG00005004742) ENSGEVG00005004724 UHMK1 (ENSGEVG00005004702) UAP1 (ENSGEVG00005004650) ##22 ENSGEVG00005004621 DDR2 (ENSGEVG00005004593) HSD17B7 (ENSGEVG00005004562) ENSGEVG00005004532 OLFML2B (ENSGEVG00005004519) ATF6 (ENSGEVG00005004476) SELP (ENSGEVG00005004306) RGS4 (ENSGEVG00005004231) RGS5 (ENSGEVG00005004212) ENSGEVG00005004184 PCDH12 (ENSGEVG00005004148) ENSGEVG00005004131 ENSGEVG00005004123 DELE1 (ENSGEVG00005004039) ENSGEVG00005019378 Abingdon island giant tortoise MODERN SPECIES 1576 TMEM121 (ENSCABG00000020763) ENSCABG00000020759 SPATA46 (ENSCABG00000020756) ENSCABG00000020753 UHMK1 (ENSCABG00000020751) UAP1 (ENSCABG00000020743) ##22 DDR2 (ENSCABG00000020741) HSD17B7 (ENSCABG00000020696) Chinese turtle MODERN SPECIES 2203 PACS2 (ENSPSIG00000013056) CRIP1 (ENSPSIG00000014406) TEDC1 (ENSPSIG00000014486) TMEM121 (ENSPSIG00000000670) UHMK1 (ENSPSIG00000014622) UAP1 (ENSPSIG00000014943) ##22 ENSPSIG00000000683 DDR2 (ENSPSIG00000015122) HSD17B7 (ENSPSIG00000015963) OLFML2B (ENSPSIG00000016495) ATF6 (ENSPSIG00000016522) SELP (ENSPSIG00000017549) RGS4 (ENSPSIG00000017597) ENSPSIG00000017751 ENSPSIG00000017762 ENSPSIG00000000703 Anura ANCESTRAL SPECIES 6 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000005496 ENSGT00940000158056 ENSGT00510000047399 ENSGT00390000015399.j ENSGT00940000155005 ENSGT00940000158561 ENSGT00950000183161.b ENSGT00940000161099.i.a ENSGT00940000161339 ENSGT00940000160256 ENSGT00940000160836.d.c.a ENSGT00940000160493 ENSGT00940000160836.d.d ENSGT00940000153464.A.b ##22 ENSGT00510000046975.b ENSGT00940000159036 ENSGT00940000157380 ENSGT00390000004199 ENSGT00940000157774 ENSGT00390000012596 ENSGT00940000164178.fb ENSGT00940000164178.gb ENSGT00950000182827.C ENSGT00940000157395 ENSGT00390000006932 ENSGT00390000003182 ENSGT00940000158998 ENSGT00940000156750 ENSGT00530000063404.b Frog MODERN SPECIES 4 faslg (ENSXETG00000041356) suco (ENSXETG00000000531) pigc (ENSXETG00000040951) dnm3 (ENSXETG00000000538) mettl13 (ENSXETG00000010438) itpa (ENSXETG00000036089) vamp4 (ENSXETG00000010444) myoc (ENSXETG00000038908) prrc2c (ENSXETG00000010448) fmo1 (ENSXETG00000025141) fmo3 (ENSXETG00000025142) fmo2 (ENSXETG00000010456) MGC89174 (ENSXETG00000010457) ENSXETG00000025145 ENSXETG00000033174 uap1 (ENSXETG00000010459) ##22 nos1ap (ENSXETG00000010460) rgs4 (ENSXETG00000010461) rgs5 (ENSXETG00000042048) nuf2 (ENSXETG00000010463) pbx1 (ENSXETG00000010464) lmx1a (ENSXETG00000013183) agl (ENSXETG00000013185) ENSXETG00000041829 ENSXETG00000042726 ENSXETG00000013197 slc35a3.1 (ENSXETG00000047097) mfsd14a (ENSXETG00000013200) sass6.2 (ENSXETG00000013202) trmt13 (ENSXETG00000013204) lrrc39 (ENSXETG00000013208) Leishan spiny toad MODERN SPECIES 11 VAMP4 (ENSLLEG00000014901) MYOC (ENSLLEG00000014968) ENSLLEG00000015242 ENSLLEG00000015406 ENSLLEG00000015526 ENSLLEG00000015678 ENSLLEG00000015734 ENSLLEG00000015754 ENSLLEG00000015865 FMO3 (ENSLLEG00000015978) ENSLLEG00000016120 ENSLLEG00000016231 ENSLLEG00000016553 ENSLLEG00000016645 ENSLLEG00000016826 UAP1 (ENSLLEG00000017087) ##22 ENSLLEG00000017449 ENSLLEG00000017639 RGS4 (ENSLLEG00000017672) RGS5 (ENSLLEG00000017729) NUF2 (ENSLLEG00000017847) PBX1 (ENSLLEG00000017987) ENSLLEG00000018211 LMX1A (ENSLLEG00000018232) ENSLLEG00000018418 AGL (ENSLLEG00000018588) ENSLLEG00000021945 ENSLLEG00000022008 ENSLLEG00000022049 ENSLLEG00000022322 ENSLLEG00000022452 Coelacanth MODERN SPECIES 444 RGS5 (ENSLACG00000016938) RGS4 (ENSLACG00000016802) ENSLACG00000016664 ENSLACG00000014624 ENSLACG00000014402 UHMK1 (ENSLACG00000014100) UAP1 (ENSLACG00000013441) ##22 DDR2 (ENSLACG00000012156) HSD17B7 (ENSLACG00000011905) LRRC52 (ENSLACG00000010752) MGST3 (ENSLACG00000010314) ALDH9A1 (ENSLACG00000009933) TMCO1 (ENSLACG00000009112) ENSLACG00000008608 UCK2 (ENSLACG00000006312) ENSLACG00000005704 Actinopterygii ANCESTRAL SPECIES 8 ENSGT00940000157937 ENSGT00940000158520 ENSGT00940000157316 ENSGT00940000166298 ENSGT00940000161004 ENSGT00940000156099 ENSGT00940000165058 ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C ENSGT00940000164081 ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00520000055591.a ENSGT00940000159829 ENSGT00940000155665 ENSGT01030000234573.A.b.a ENSGT00940000156209 ENSGT00940000154396.b.b ENSGT00940000160185 ENSGT00940000156301 ENSGT00940000155190 ENSGT00390000018600 ENSGT00730000111209 ENSGT00390000006503.a ENSGT00940000158755 Neopterygii ANCESTRAL SPECIES 8 ENSGT00940000157937.b ENSGT00940000158520 ENSGT00940000157316 ENSGT00940000166298 ENSGT00940000161004 ENSGT00940000156099 ENSGT00940000165058 ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C ENSGT00940000164081 ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b ENSGT00390000013340 ENSGT00520000055591.a ENSGT00940000159829 ENSGT00940000155665 ENSGT01030000234573.A.b.a ENSGT00940000156209 ENSGT00940000154396.b.b ENSGT00940000160185 ENSGT00940000156301 ENSGT00940000155190 ENSGT00390000018600 ENSGT00730000111209 ENSGT00390000006503.a ENSGT00940000158755 Osteoglossocephalai ANCESTRAL SPECIES 9 ENSGT00390000011987 ENSGT01050000244879.a.b.e ENSGT00940000154396.b.a.a.a ENSGT00940000155603.B ENSGT00940000158520.f ENSGT00940000156099 ENSGT00940000165058.a ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00520000055591.a.a ENSGT00940000159829.c.a ENSGT00940000159829.d ENSGT00940000155665.b ENSGT01030000234573.A.b.a ENSGT00940000156209 ENSGT00940000154396.b.b ENSGT00940000174981 ENSGT00940000156301.a.a ENSGT00940000155190 ENSGT00390000018600 ENSGT00730000111209 ENSGT00390000006503.a ENSGT00940000158755 Clupeocephala ANCESTRAL SPECIES 148 ENSGT00390000011740 ENSGT00940000161004 ENSGT00940000159428.e.a ENSGT00940000156051.c.b ENSGT00390000011987 ENSGT00940000156099 ENSGT00940000165058.a ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00520000055591.a.a ENSGT00940000159829.c.a Otomorpha ANCESTRAL SPECIES 170 ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000162953 ENSGT00940000164427.a.b ENSGT00940000156099 ENSGT00940000165058.a ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00520000055591.a.a ENSGT00940000159829.c.a ENSGT00390000013340 ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00940000155665.a ENSGT01030000234573.A.b.a.d ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00510000048988 Clupeiformes ANCESTRAL SPECIES 13 ENSGT01030000234573.A.b.a.d ENSGT00940000155665.a ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000162953 ENSGT00940000159678 ENSGT00940000156099 ENSGT00940000165058.a ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340 ENSGT00520000055591.a.a ENSGT00940000159829.c.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00940000155941.A ENSGT00390000018718 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00530000063498.B ENSGT00730000111085.A Atlantic herring MODERN SPECIES 1 slc35d1a (ENSCHAG00000027162) opa1 (ENSCHAG00000025933) her6 (ENSCHAG00000025730) ENSCHAG00000025729 ENSCHAG00000025728 lrrc15 (ENSCHAG00000025724) brinp3a.2 (ENSCHAG00000025720) brinp3a.1 (ENSCHAG00000025711) ENSCHAG00000025684 rgs8 (ENSCHAG00000025677) rgs16 (ENSCHAG00000025671) rgs5a (ENSCHAG00000025664) rgs4 (ENSCHAG00000025663) NOS1AP (ENSCHAG00000025661) uhmk1 (ENSCHAG00000025659) uap1 (ENSCHAG00000025630) ##22 DDR2 (ENSCHAG00000025439) hsd17b7 (ENSCHAG00000025416) serbp1a (ENSCHAG00000025376) il12rb2 (ENSCHAG00000025366) ENSCHAG00000025347 ATP13A3 (ENSCHAG00000024418) tmem44 (ENSCHAG00000024350) ENSCHAG00000024342 tie1 (ENSCHAG00000024160) mpl (ENSCHAG00000024138) ENSCHAG00000024135 orc1 (ENSCHAG00000024107) prpf38a (ENSCHAG00000024091) dda1 (ENSCHAG00000024078) acap2b (ENSCHAG00000021837) Denticle herring MODERN SPECIES 4 mier1a (ENSDCDG00000018890) slc35d1a (ENSDCDG00000018949) opa1 (ENSDCDG00000019102) her6 (ENSDCDG00000020542) ENSDCDG00000020544 lrrc15 (ENSDCDG00000020545) brinp3a.2 (ENSDCDG00000020549) brinp3a.1 (ENSDCDG00000020554) ENSDCDG00000020559 rgs8 (ENSDCDG00000020560) rgs16 (ENSDCDG00000020564) rgs5a (ENSDCDG00000020566) rgs4 (ENSDCDG00000020570) NOS1AP (ENSDCDG00000020575) uhmk1 (ENSDCDG00000020582) uap1 (ENSDCDG00000020591) ##22 DDR2 (ENSDCDG00000020647) hsd17b7 (ENSDCDG00000020750) serbp1a (ENSDCDG00000020756) ENSDCDG00000020758 ENSDCDG00000020759 ATP13A3 (ENSDCDG00000020765) ENSDCDG00000020804 tie1 (ENSDCDG00000020825) mpl (ENSDCDG00000022428) prpf38a (ENSDCDG00000022433) ABHD8 (ENSDCDG00000022436) zgc:85936 (ENSDCDG00000022444) lmnb2 (ENSDCDG00000022485) rpl36 (ENSDCDG00000022659) LONP1 (ENSDCDG00000022685) Otophysi ANCESTRAL SPECIES 6 ENSGT00940000155530 ENSGT01030000234818 ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000162953 ENSGT00940000164427.a.b ENSGT00940000156099 ENSGT00940000165058.a ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340 ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00940000155665.a ENSGT01030000234573.A.b.a.d ENSGT00940000154819.a.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00510000048988 ENSGT00940000157693 Characiphysae ANCESTRAL SPECIES 2 ENSGT00940000155530 ENSGT01030000234818 ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000162953 ENSGT00940000164427.a.b ENSGT00940000156099 ENSGT00940000165058.a ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340 ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00940000155665.a ENSGT01030000234573.A.b.a.d ENSGT00940000154819.a.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 Channel catfish MODERN SPECIES 2 pcdh9 (ENSIPUG00000004861) rtn4a (ENSIPUG00000004878) ENSIPUG00000004884 ENSIPUG00000004889 ENSIPUG00000004893 brinp3a.2 (ENSIPUG00000004906) ENSIPUG00000004913 brinp3a.1 (ENSIPUG00000004922) rgs8 (ENSIPUG00000004966) rgs16 (ENSIPUG00000004972) rgs5a (ENSIPUG00000004987) rgs4 (ENSIPUG00000005008) NOS1AP (ENSIPUG00000005042) ENSIPUG00000005089 uhmk1 (ENSIPUG00000005095) uap1 (ENSIPUG00000005127) ##22 ddr2 (ENSIPUG00000005192) hsd17b7 (ENSIPUG00000005239) serbp1a (ENSIPUG00000005252) il12rb2 (ENSIPUG00000005273) ENSIPUG00000005294 il23r (ENSIPUG00000005299) slc35d1a (ENSIPUG00000005319) mier1a (ENSIPUG00000005357) lrp8 (ENSIPUG00000005394) dmrt2b (ENSIPUG00000005442) fam183a (ENSIPUG00000005457) Tmem125 (ENSIPUG00000005492) ap1m3 (ENSIPUG00000005505) si:ch73-185c24.2 (ENSIPUG00000005615) tie1 (ENSIPUG00000005642) Characiphysae_b ANCESTRAL SPECIES ENSGT00940000155530 ENSGT01030000234818 ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000162953 ENSGT00940000164427.a.b ENSGT00940000156099 ENSGT00940000165058.a ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340 ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00940000155665.a ENSGT01030000234573.A.b.a.d ENSGT00940000154819.a.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 Characoidei ANCESTRAL SPECIES ENSGT00390000018525.a.b.e.b ENSGT00940000155530 ENSGT00530000067036.a ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000162953 ENSGT00940000164427.a.b ENSGT00940000156099 ENSGT00940000165058.a ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340 ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00940000155665.a ENSGT01030000234573.A.b.a.d ENSGT00940000154819.a.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000003015.c ENSGT00940000166725 ENSGT00940000173535 ENSGT00940000157693 ENSGT00940000166530 Red-bellied piranha MODERN SPECIES 9 tmem45a (ENSPNAG00000011800) ENSPNAG00000006993 opa1 (ENSPNAG00000001917) her6 (ENSPNAG00000011552) ENSPNAG00000011516 ENSPNAG00000001769 ENSPNAG00000011472 brinp3a.2 (ENSPNAG00000011469) brinp3a.1 (ENSPNAG00000011442) rgs8 (ENSPNAG00000011427) rgs16 (ENSPNAG00000011410) rgs5a (ENSPNAG00000001715) rgs4 (ENSPNAG00000001699) NOS1AP (ENSPNAG00000011354) uhmk1 (ENSPNAG00000011288) uap1 (ENSPNAG00000001637) ##22 DDR2 (ENSPNAG00000001610) hsd17b7 (ENSPNAG00000011164) serbp1a (ENSPNAG00000011149) il12rb2 (ENSPNAG00000011135) il23r (ENSPNAG00000001552) slc35d1a (ENSPNAG00000001523) mier1a (ENSPNAG00000011050) lrp8 (ENSPNAG00000010993) dmrt2b (ENSPNAG00000010744) cfap144 (ENSPNAG00000010724) TMEM125 (ENSPNAG00000010710) ap1m3 (ENSPNAG00000001432) si:ch73-185c24.2 (ENSPNAG00000010668) tie1 (ENSPNAG00000010620) mpl (ENSPNAG00000010486) Mexicana tetra MODERN SPECIES 4 tmem45a (ENSAMXG00000012328) ENSAMXG00000012312 opa1 (ENSAMXG00000012295) her6 (ENSAMXG00000012278) ENSAMXG00000037602 ENSAMXG00000038444 ENSAMXG00000042939 brinp3a.2 (ENSAMXG00000032760) brinp3a.1 (ENSAMXG00000031426) rgs8 (ENSAMXG00000032897) rgs16 (ENSAMXG00000041945) rgs5a (ENSAMXG00000011564) rgs4 (ENSAMXG00000035622) NOS1AP (ENSAMXG00000011523) uhmk1 (ENSAMXG00000037781) uap1 (ENSAMXG00000011503) ##22 DDR2 (ENSAMXG00000011496) hsd17b7 (ENSAMXG00000029262) serbp1a (ENSAMXG00000011483) il12rb2 (ENSAMXG00000011476) il23r (ENSAMXG00000029026) slc35d1a (ENSAMXG00000042217) mier1a (ENSAMXG00000011460) lrp8 (ENSAMXG00000011425) dmrt2b (ENSAMXG00000011403) ENSAMXG00000034783 TMEM125 (ENSAMXG00000025440) ap1m3 (ENSAMXG00000011372) si:ch73-185c24.2 (ENSAMXG00000033984) tie1 (ENSAMXG00000011333) mpl (ENSAMXG00000011307) Electric eel MODERN SPECIES 31 tmem45a (ENSEEEG00000005344) ENSEEEG00000005345 opa1 (ENSEEEG00000005403) her6 (ENSEEEG00000007061) ENSEEEG00000007066 GP5 (ENSEEEG00000007069) brinp3a.2 (ENSEEEG00000007070) brinp3a.1 (ENSEEEG00000007072) rgs8 (ENSEEEG00000007073) rgs16 (ENSEEEG00000007075) rgs5a (ENSEEEG00000007076) rgs4 (ENSEEEG00000007080) NOS1AP (ENSEEEG00000007081) ENSEEEG00000007084 uhmk1 (ENSEEEG00000007085) uap1 (ENSEEEG00000007090) ##22 DDR2 (ENSEEEG00000007093) hsd17b7 (ENSEEEG00000007099) serbp1a (ENSEEEG00000007102) il12rb2 (ENSEEEG00000007104) ENSEEEG00000007106 slc35d1a (ENSEEEG00000007111) mier1a (ENSEEEG00000007118) lrp8 (ENSEEEG00000007145) ENSEEEG00000007591 dmrt2b (ENSEEEG00000007592) cfap144 (ENSEEEG00000007599) TMEM125 (ENSEEEG00000007601) ap1m3 (ENSEEEG00000007627) ENSEEEG00000008580 tie1 (ENSEEEG00000008596) Cyprinoidei ANCESTRAL SPECIES 2 ENSGT01030000234818 ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000162953 ENSGT00940000164427.a.b ENSGT00950000182844.b.b.b.a.a.j ENSGT00940000156099 ENSGT00940000165058.a ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340 ENSGT00520000055591.a.a ENSGT00940000155776.a.a ENSGT00940000159829.d ENSGT00940000155665.a ENSGT01030000234573.A.b.a.d ENSGT00940000154819.a.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00510000048988 ENSGT00940000157693 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 12 ENSGT01030000234818.b ENSGT00550000074851.b ENSGT00940000159619.a.g ENSGT00940000162953.u.b ENSGT00940000164427.a.b ENSGT00940000162953.u.a ENSGT00950000182844.b.b.b.a.a.j.b ENSGT00940000156099.c ENSGT00940000165058.a.a ENSGT00940000154304.C.d.a ENSGT00940000164081.b.a ENSGT00940000157380.a ENSGT00940000159036.d ENSGT00510000046975.b.i.a ENSGT00940000157769.k.b ENSGT00940000153464.A.b.m ##22 ENSGT00940000154842.a.b.e.a ENSGT00390000013340.b ENSGT00520000055591.a.a.a ENSGT00940000155776.a.a.b ENSGT00940000159829.d.b ENSGT00940000155665.a.a ENSGT01030000234573.A.b.a.d.b ENSGT00940000154819.a.a.a.a.b ENSGT00940000156282.a.b.d ENSGT00390000006224 ENSGT00390000003015.c.b ENSGT00940000166725.a ENSGT00510000048988 ENSGT00940000157693.m ENSGT00940000166530.b Goldfish MODERN SPECIES 46 tmem45a (ENSCARG00000040162) ENSCARG00000040150 opa1 (ENSCARG00000031305) her6 (ENSCARG00000031026) ENSCARG00000031013 ENSCARG00000031009 rhcgl1 (ENSCARG00000029900) brinp3a.2 (ENSCARG00000029857) brinp3a.1 (ENSCARG00000029850) rgs8 (ENSCARG00000029837) rgs16 (ENSCARG00000029822) rgs5a (ENSCARG00000029812) rgs4 (ENSCARG00000029804) ENSCARG00000029747 uhmk1 (ENSCARG00000029706) uap1 (ENSCARG00000029631) ##22 DDR2 (ENSCARG00000029459) hsd17b7 (ENSCARG00000029415) serbp1a (ENSCARG00000029384) il12rb2 (ENSCARG00000029321) il23r (ENSCARG00000029297) slc35d1a (ENSCARG00000028855) mier1a (ENSCARG00000028770) lrp8 (ENSCARG00000028366) dmrt2b (ENSCARG00000028285) cfap144 (ENSCARG00000028276) TMEM125 (ENSCARG00000028268) ap1m3 (ENSCARG00000028067) ENSCARG00000028021 tie1 (ENSCARG00000026648) mpl (ENSCARG00000026515) Cyprininae_a ANCESTRAL SPECIES 23 ENSGT01030000234818.b ENSGT00550000074851.b ENSGT00940000159619.a.g ENSGT00940000162953.u.b ENSGT00940000164427.a.b.g ENSGT00950000182844.b.b.b.a.a.j.b ENSGT00940000156099.c ENSGT00940000165058.a.a.a ENSGT00940000154304.C.d.a ENSGT00940000164081.b.a ENSGT00940000157380.a ENSGT00940000159036.d ENSGT00510000046975.b.i.a ENSGT00940000164616 ENSGT00940000157769.k.b ENSGT00940000153464.A.b.m ##22 ENSGT00940000154842.a.b.e.a ENSGT00390000013340.a ENSGT00520000055591.a.a.a ENSGT00940000155776.a.a.b ENSGT00940000159829.d.b ENSGT00940000155665.a.a ENSGT01030000234573.A.b.a.d.b ENSGT00940000154819.a.a.a.a.b ENSGT00940000156282.a.b.d ENSGT00390000006224 ENSGT00390000003015.c.b ENSGT00940000166725.a ENSGT00510000048988 ENSGT00940000157693.m ENSGT00940000166530.b Golden-line barbel MODERN SPECIES 411 rgs8 (ENSSGRG00000055553) rgs16 (ENSSGRG00000055554) rgs5a (ENSSGRG00000055555) rgs4 (ENSSGRG00000055556) ENSSGRG00000055557 ENSSGRG00000055558 uhmk1 (ENSSGRG00000055559) uap1 (ENSSGRG00000055560) ##22 DDR2 (ENSSGRG00000055561) hsd17b7 (ENSSGRG00000055562) serbp1a (ENSSGRG00000055563) il12rb2 (ENSSGRG00000055564) il23r (ENSSGRG00000055565) slc35d1a (ENSSGRG00000055567) mier1a (ENSSGRG00000055568) lrp8 (ENSSGRG00000055569) dmrt2b (ENSSGRG00000055570) cfap144 (ENSSGRG00000055571) TMEM125 (ENSSGRG00000055573) ap1m3 (ENSSGRG00000055575) ENSSGRG00000001189 tie1 (ENSSGRG00000001199) ENSSGRG00000001212 Common carp reference MODERN SPECIES 10 opa1 (ENSCCRG00000008910) her6 (ENSCCRG00000080154) ENSCCRG00000061531 ENSCCRG00000064817 ENSCCRG00000065404 ENSCCRG00000040696 rhcgl1 (ENSCCRG00000029442) brinp3a.2 (ENSCCRG00000073021) brinp3a.1 (ENSCCRG00000055845) rgs8 (ENSCCRG00000052590) rgs16 (ENSCCRG00000029441) rgs5a (ENSCCRG00000029440) rgs4 (ENSCCRG00000073562) ENSCCRG00000081313 uhmk1 (ENSCCRG00000005528) uap1 (ENSCCRG00000005491) ##22 ENSCCRG00000005018 hsd17b7 (ENSCCRG00000004923) serbp1a (ENSCCRG00000004304) il12rb2 (ENSCCRG00000000486) il23r (ENSCCRG00000019996) slc35d1a (ENSCCRG00000002577) mier1a (ENSCCRG00000020147) lrp8 (ENSCCRG00000028714) dmrt2b (ENSCCRG00000007718) cfap144 (ENSCCRG00000000800) TMEM125 (ENSCCRG00000073017) ap1m3 (ENSCCRG00000031744) C1orf210 (ENSCCRG00000007924) ENSCCRG00000003678 tie1 (ENSCCRG00000038381) Cyprininae ANCESTRAL SPECIES 131 ENSGT00940000159402.h ENSGT00390000018525.a.b.e.b ENSGT00940000155530.b ENSGT01030000234818.a ENSGT00550000074851.a ENSGT00940000159619.a.h ENSGT00950000182844.b.b.b.a.a.j.a ENSGT00940000156099.d ENSGT00940000165058.a.b ENSGT00940000154304.C.d.b ENSGT00940000164081.b.b ENSGT00940000157380.b ENSGT00940000159036.c ENSGT00510000046975.b.i.b ENSGT00940000157769.k.a ENSGT00940000153464.A.b.n ##22 ENSGT00940000154842.a.b.e.b ENSGT00390000013340.a ENSGT00520000055591.a.a.b ENSGT00940000155776.a.a.a ENSGT00940000159829.d.a ENSGT00940000155665.a.b ENSGT01030000234573.A.b.a.d.a ENSGT00940000154819.a.a.a.a.a ENSGT00940000156282.a.b.c ENSGT00390000003015.c.a ENSGT00940000166725.b ENSGT01030000234931 ENSGT00940000157693.n ENSGT00940000166530.a ENSGT00530000063498.B.b Goldfish MODERN SPECIES 24 trnt1 (ENSCARG00000011606) arl6ip5a (ENSCARG00000011622) FRMD4B (ENSCARG00000011641) mitfa (ENSCARG00000011744) zgc:113054 (ENSCARG00000011990) MDFIC2 (ENSCARG00000012024) foxp1b (ENSCARG00000012040) brinp3a.1 (ENSCARG00000012218) rgs8 (ENSCARG00000012226) rgs16 (ENSCARG00000012232) rgs5a (ENSCARG00000012235) rgs4 (ENSCARG00000012238) ENSCARG00000012255 ENSCARG00000012440 uhmk1 (ENSCARG00000012456) uap1 (ENSCARG00000012495) ##22 DDR2 (ENSCARG00000012545) hsd17b7 (ENSCARG00000013060) serbp1a (ENSCARG00000013066) il12rb2 (ENSCARG00000013084) il23r (ENSCARG00000013103) slc35d1a (ENSCARG00000013129) mier1a (ENSCARG00000013232) lrp8 (ENSCARG00000013336) dmrt2b (ENSCARG00000013496) TMEM125 (ENSCARG00000013510) ap1m3 (ENSCARG00000013524) ENSCARG00000013619 tie1 (ENSCARG00000013636) mpl (ENSCARG00000013760) orc1 (ENSCARG00000013841) Cyprininae_a ANCESTRAL SPECIES 10 ENSGT00940000155530.b ENSGT01030000234818.a ENSGT00550000074851.a ENSGT00940000159619.a.h ENSGT00940000162953.u.a ENSGT00940000164427.a.b.h ENSGT00950000182844.b.b.b.a.a.j.a ENSGT00940000156099.d ENSGT00940000165058.a.b ENSGT00940000154304.C.d.b ENSGT00940000164081.b.b ENSGT00940000157380.b ENSGT00940000159036.c ENSGT00510000046975.b.i.b ENSGT00940000157769.k.a ENSGT00940000153464.A.b.n ##22 ENSGT00940000154842.a.b.e.b ENSGT00390000013340.b ENSGT00520000055591.a.a.b ENSGT00940000155776.a.a.a ENSGT00940000159829.d.a ENSGT00940000155665.a.b ENSGT01030000234573.A.b.a.d.a ENSGT00940000154819.a.a.a.a.a ENSGT00940000156282.a.b.c ENSGT00390000003015.c.a ENSGT00940000166725.b ENSGT01030000234931 ENSGT00940000157693.n ENSGT00940000166530.a ENSGT00530000063498.B.b Common carp reference MODERN SPECIES 16 ENSCCRG00000077764 ENSCCRG00000004681 ENSCCRG00000074428 rhcgl1 (ENSCCRG00000040745) ENSCCRG00000071493 brinp3a.2 (ENSCCRG00000028787) ENSCCRG00000073142 ENSCCRG00000079990 brinp3a.1 (ENSCCRG00000062300) rgs8 (ENSCCRG00000029443) rgs16 (ENSCCRG00000071629) rgs5a (ENSCCRG00000052230) rgs4 (ENSCCRG00000080224) ENSCCRG00000063400 uhmk1 (ENSCCRG00000002063) uap1 (ENSCCRG00000002084) ##22 ENSCCRG00000002121 hsd17b7 (ENSCCRG00000002493) il12rb2 (ENSCCRG00000019993) il23r (ENSCCRG00000053925) slc35d1a (ENSCCRG00000070591) mier1a (ENSCCRG00000004289) lrp8 (ENSCCRG00000015375) dmrt2b (ENSCCRG00000016515) TMEM125 (ENSCCRG00000059531) ap1m3 (ENSCCRG00000013767) tie1 (ENSCCRG00000003766) mpl (ENSCCRG00000003733) orc1 (ENSCCRG00000031441) prpf38a (ENSCCRG00000003656) akr1a1b (ENSCCRG00000060658) Golden-line barbel MODERN SPECIES 186 ENSSGRG00000023010 ENSSGRG00000023012 uhmk1 (ENSSGRG00000023013) uap1 (ENSSGRG00000023021) ##22 DDR2 (ENSSGRG00000023088) serbp1a (ENSSGRG00000023110) il12rb2 (ENSSGRG00000023111) il23r (ENSSGRG00000023112) slc35d1a (ENSSGRG00000023118) mier1a (ENSSGRG00000023169) lrp8 (ENSSGRG00000023199) dmrt2b (ENSSGRG00000023245) cfap144 (ENSSGRG00000023246) ENSSGRG00000023247 TMEM125 (ENSSGRG00000023248) ap1m3 (ENSSGRG00000023250) ENSSGRG00000023251 tie1 (ENSSGRG00000023283) mpl (ENSSGRG00000023664) Zebrafish MODERN SPECIES 21 tmem45a (ENSDARG00000070743) ENSDARG00000100255 opa1 (ENSDARG00000070801) her6 (ENSDARG00000006514) lrrc15 (ENSDARG00000070792) rhcgl1 (ENSDARG00000007080) brinp3a.2 (ENSDARG00000061051) brinp3a.1 (ENSDARG00000076351) rgs8 (ENSDARG00000070037) rgs16 (ENSDARG00000040177) rgs5a (ENSDARG00000002644) rgs4 (ENSDARG00000070047) NOS1AP (ENSDARG00000105071) ENSDARG00000078725 uhmk1 (ENSDARG00000059575) uap1 (ENSDARG00000052170) ##22 DDR2 (ENSDARG00000100693) hsd17b7 (ENSDARG00000088140) serbp1a (ENSDARG00000074242) il12rb2 (ENSDARG00000052157) il23r (ENSDARG00000052158) slc35d1a (ENSDARG00000011973) mier1a (ENSDARG00000041072) lrp8 (ENSDARG00000070074) dmrt2b (ENSDARG00000070013) cfap144 (ENSDARG00000087144) ap1m3 (ENSDARG00000039512) si:ch73-185c24.2 (ENSDARG00000096908) tie1 (ENSDARG00000004105) mpl (ENSDARG00000039222) orc1 (ENSDARG00000039217) Euteleosteomorpha ANCESTRAL SPECIES 75 ENSGT00940000157937.b ENSGT00940000158520.e.b ENSGT00940000157316.f ENSGT00940000158520.f ENSGT00940000157316.e.b ENSGT00940000156099 ENSGT00940000165058.a ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00990000205848 ENSGT00950000182879.a.b.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01100000263662 ENSGT00740000116213 Acanthomorphata ANCESTRAL SPECIES 11 ENSGT00940000156012 ENSGT00940000155854.b.a.a ENSGT00940000156165 ENSGT00940000166091 ENSGT00950000182920.b.a.a ENSGT00940000159170.c ENSGT00940000164939.a.a ENSGT00940000154737.c.h ENSGT00940000160191 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01100000263662 ENSGT01070000253866 Cod MODERN SPECIES 3 ENSGMOG00000025809 rgl1 (ENSGMOG00000023024) ENSGMOG00000027064 ENSGMOG00000016644 plin3 (ENSGMOG00000016686) rorca (ENSGMOG00000000779) SH3GL1 (ENSGMOG00000000764) mpnd (ENSGMOG00000000741) stap2b (ENSGMOG00000031573) fsd1 (ENSGMOG00000012688) si:ch211-129c21.1 (ENSGMOG00000006845) ENSGMOG00000035805 scamp4 (ENSGMOG00000015365) chaf1a (ENSGMOG00000015371) ubxn6 (ENSGMOG00000015399) uap1 (ENSGMOG00000015423) ##22 ENSGMOG00000015439 hsd17b7 (ENSGMOG00000000160) serbp1a (ENSGMOG00000015470) lrp8 (ENSGMOG00000002561) cfap144 (ENSGMOG00000031988) EBNA1BP2 (ENSGMOG00000004150) TMEM125 (ENSGMOG00000030092) ap1m3 (ENSGMOG00000004130) ENSGMOG00000009824 ENSGMOG00000004733 ENSGMOG00000004711 ENSGMOG00000031193 ENSGMOG00000008773 ENSGMOG00000023155 ENSGMOG00000008740 Euacanthomorphacea ANCESTRAL SPECIES 9 ENSGT01030000234558.C.p ENSGT00940000156012 ENSGT00940000155854.b.a.a ENSGT00940000166091 ENSGT00950000182920.b.a.a ENSGT00940000159170.c ENSGT00940000164939.a.a ENSGT00940000154737.c.h ENSGT00940000160191 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00990000205848 ENSGT00950000182879.a.b.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01100000263662 Pinecone sodierfish MODERN SPECIES 18 colgalt2b (ENSMMDG00005007155) rgl1 (ENSMMDG00005007172) ENSMMDG00005007277 ABHD17A (ENSMMDG00005007280) zgc:77486 (ENSMMDG00005007311) plin3 (ENSMMDG00005007315) SEMA6B (ENSMMDG00005007331) rorca (ENSMMDG00005007343) sh3gl1b (ENSMMDG00005007345) mpnd (ENSMMDG00005007413) stap2b (ENSMMDG00005007531) fsd1 (ENSMMDG00005007561) si:ch211-129c21.1 (ENSMMDG00005008002) scamp4 (ENSMMDG00005008009) ubxn6 (ENSMMDG00005008016) uap1 (ENSMMDG00005008036) ##22 DDR2 (ENSMMDG00005008427) ENSMMDG00005008432 serbp1a (ENSMMDG00005008434) il12rb2 (ENSMMDG00005008439) ENSMMDG00005008448 ENSMMDG00005008457 ENSMMDG00005008464 ENSMMDG00005008504 ENSMMDG00005009242 cyp2n13 (ENSMMDG00005009434) cyp2n13 (ENSMMDG00005009967) ENSMMDG00005009992 cyp2n13 (ENSMMDG00005000182) cyp2n13 (ENSMMDG00005000494) cyp2n13 (ENSMMDG00005000977) Percomorphaceae ANCESTRAL SPECIES 12 ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000170739 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b ENSGT00940000161659 ENSGT00940000158995.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00990000205848 ENSGT00950000182879.a.b.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01100000263662 Tiger tail seahorse MODERN SPECIES 469 tm6sf2b (ENSHCOG00000000879) SBNO2 (ENSHCOG00000000884) tjp3 (ENSHCOG00000000890) ARHGAP45 (ENSHCOG00000000898) POLR2E (ENSHCOG00000000906) ENSHCOG00000000907 gpx4b (ENSHCOG00000000909) PIP5K1C (ENSHCOG00000000914) ENSHCOG00000000954 marchf2 (ENSHCOG00000000979) ENSHCOG00000000985 ENSHCOG00000000990 fsd1 (ENSHCOG00000000994) chaf1a (ENSHCOG00000001004) ubxn6 (ENSHCOG00000001010) uap1 (ENSHCOG00000001019) ##22 DDR2 (ENSHCOG00000001029) hsd17b7 (ENSHCOG00000000044) serbp1a (ENSHCOG00000001044) tmem59l (ENSHCOG00000001047) ENSHCOG00000001053 ssbp4 (ENSHCOG00000001058) fkbp8 (ENSHCOG00000001065) ell (ENSHCOG00000001070) DOT1L (ENSHCOG00000001086) amh (ENSHCOG00000001199) oaz1a (ENSHCOG00000001278) org (ENSHCOG00000001285) lingo3a (ENSHCOG00000001286) ENSHCOG00000000737 ENSHCOG00000001314 Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00940000165680.A ENSGT00940000170739 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000163126.a.b.h ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.b.a ENSGT00990000205848 ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b Ovalentaria ANCESTRAL SPECIES 9 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.b ENSGT00950000182879.a.b.b.b.a ENSGT00990000205848 ENSGT00950000182879.a.b.b.a.b.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.b ENSGT00950000182879.a.b.b.b.a ENSGT00990000205848 ENSGT00950000182879.a.b.b.a.b.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 Pomacentridae ANCESTRAL SPECIES 14 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.a.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b.f ENSGT00990000205848 ENSGT00950000182879.a.b.b.a.b.a.a.a.a ENSGT00950000182879.a.b.a.a.b.a.g.b.k ENSGT00950000182879.a.b.a.a.b.b.b.b.e ENSGT00950000182879.a.b.a.a.b.a.g.b.l ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.a.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b.f ENSGT00990000205848 ENSGT00950000182879.a.b.b.a.b.a.a.a.a ENSGT00950000182879.a.b.a.a.b.a.g.b.k ENSGT00950000182879.a.b.a.a.b.b.b.b.e ENSGT00950000182879.a.b.a.a.b.a.g.b.l ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a Amphiprion ANCESTRAL SPECIES 2 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.a.a.b ENSGT00990000205848 ENSGT00950000182879.a.b.b.a.b.a.a.a.a.b ENSGT00950000182879.a.b.b.a.b.a.b.a.a ENSGT00940000179890.a ENSGT00950000182879.a.b.b.a.b.a.b.b.b ENSGT00950000182879.a.b.b.a.b.a.b.b.a ENSGT00950000182879.a.b.b.a.b.a.a.a.b ENSGT00950000182879.a.b.b.a.b.a.a.a.a.a.a ENSGT00950000182879.a.b.b.a.b.a.a.a.a.a.b Orange clownfish MODERN SPECIES 11 tjp3 (ENSAPEG00000008924) ARHGAP45 (ENSAPEG00000008981) POLR2E (ENSAPEG00000009000) ENSAPEG00000009041 PIP5K1C (ENSAPEG00000009071) rab11ba (ENSAPEG00000009177) marchf2 (ENSAPEG00000009205) ENSAPEG00000009227 ENSAPEG00000009245 ENSAPEG00000009260 fsd1 (ENSAPEG00000009273) si:ch211-129c21.1 (ENSAPEG00000009283) scamp4 (ENSAPEG00000009291) chaf1a (ENSAPEG00000009323) ubxn6 (ENSAPEG00000009347) uap1 (ENSAPEG00000009472) ##22 DDR2 (ENSAPEG00000009522) hsd17b7 (ENSAPEG00000009585) serbp1a (ENSAPEG00000009604) il12rb2 (ENSAPEG00000009692) ENSAPEG00000009715 ENSAPEG00000009836 ENSAPEG00000009852 ENSAPEG00000009862 ENSAPEG00000009902 ENSAPEG00000009943 ENSAPEG00000009953 ENSAPEG00000009982 ENSAPEG00000010040 cyp2n13 (ENSAPEG00000010865) cyp2n13 (ENSAPEG00000010876) Clown anemonefish MODERN SPECIES 3210 ENSAOCG00000018849 ENSAOCG00000018867 fsd1 (ENSAOCG00000018979) si:ch211-129c21.1 (ENSAOCG00000019021) scamp4 (ENSAOCG00000001955) chaf1a (ENSAOCG00000019078) ubxn6 (ENSAOCG00000019099) uap1 (ENSAOCG00000019166) ##22 Spiny chromis MODERN SPECIES 1325 ENSAPOG00000019118 ENSAPOG00000019128 fsd1 (ENSAPOG00000019207) si:ch211-129c21.1 (ENSAPOG00000019235) scamp4 (ENSAPOG00000019276) chaf1a (ENSAPOG00000019292) ubxn6 (ENSAPOG00000019301) uap1 (ENSAPOG00000019382) ##22 DDR2 (ENSAPOG00000019464) hsd17b7 (ENSAPOG00000019472) serbp1a (ENSAPOG00000001006) il12rb2 (ENSAPOG00000001101) ENSAPOG00000019572 ENSAPOG00000019620 ENSAPOG00000019632 ENSAPOG00000019648 ENSAPOG00000019677 Bicolor damselfish MODERN SPECIES 1474 ENSSPAG00000014559 ENSSPAG00000014542 fsd1 (ENSSPAG00000014443) si:ch211-129c21.1 (ENSSPAG00000014409) scamp4 (ENSSPAG00000014378) chaf1a (ENSSPAG00000014297) ubxn6 (ENSSPAG00000014276) uap1 (ENSSPAG00000014217) ##22 DDR2 (ENSSPAG00000014147) hsd17b7 (ENSSPAG00000014092) serbp1a (ENSSPAG00000014054) il12rb2 (ENSSPAG00000014022) ENSSPAG00000013993 ENSSPAG00000013986 Cichlidae ANCESTRAL SPECIES 17 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00950000182879.a.b.b.b.a ENSGT00990000205848 ENSGT00950000182879.a.b.b.a.b.a.c.a ENSGT00940000179890.a ENSGT00950000182879.a.b.b.a.b.a.c.b ENSGT00950000182879.a.b.b.a.b.b.b ENSGT00950000182879.a.b.a.a.b.b.b.b.g ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a Pseudocrenilabrinae ANCESTRAL SPECIES 10 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00950000182879.a.b.b.b.a ENSGT00990000205848 ENSGT00950000182879.a.b.b.a.b.a.c.a.c.b ENSGT00950000182879.a.b.b.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.b.b.b.g.a ENSGT00950000182879.a.b.a.a.b.b.b.b.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b.h ENSGT00950000182879.a.b.b.a.b.b.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 26 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00950000182879.a.b.b.b.a Haplochromini ANCESTRAL SPECIES 16 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.a.c.a.c.b ENSGT00950000182879.a.b.b.a.b.a.c.b.b ENSGT00950000182879.a.b.b.a.b.a.c.a.c.a.a ENSGT00950000182879.a.b.b.a.b.a.c.b.a ENSGT00950000182879.a.b.b.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.b.b.b.g.a ENSGT00950000182879.a.b.a.a.b.b.b.b.g.b Burton s mouthbrooder MODERN SPECIES 853 gpx4a (ENSHBUG00000009822) PIP5K1C (ENSHBUG00000009866) rab11ba (ENSHBUG00000009894) marchf2 (ENSHBUG00000009928) ENSHBUG00000009947 stap2b (ENSHBUG00000009959) fsd1 (ENSHBUG00000009969) si:ch211-129c21.1 (ENSHBUG00000009979) scamp4 (ENSHBUG00000000931) chaf1a (ENSHBUG00000010031) ubxn6 (ENSHBUG00000010046) uap1 (ENSHBUG00000010126) ##22 DDR2 (ENSHBUG00000010237) hsd17b7 (ENSHBUG00000010261) serbp1a (ENSHBUG00000010298) il12rb2 (ENSHBUG00000010334) ENSHBUG00000000274 ENSHBUG00000011040 ENSHBUG00000011109 ENSHBUG00000011132 ENSHBUG00000012302 ENSHBUG00000012347 ENSHBUG00000012427 Haplochromini_A ANCESTRAL SPECIES 15 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.a.c.a.c.b ENSGT00950000182879.a.b.b.a.b.a.c.a.d ENSGT00950000182879.a.b.b.a.b.a.c.b.b ENSGT00950000182879.a.b.b.a.b.a.c.a.c.a.a ENSGT00950000182879.a.b.b.a.b.a.c.b.a ENSGT00950000182879.a.b.b.a.b.b.a.b.b ENSGT00950000182879.a.b.b.a.b.b.a.b.a ENSGT00950000182879.a.b.b.a.b.b.b.a Haplochromini_B ANCESTRAL SPECIES 10 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a.e ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.a.c.a.c.b ENSGT00950000182879.a.b.b.a.b.a.c.a.d ENSGT00950000182879.a.b.b.a.b.a.c.b.b ENSGT00950000182879.a.b.b.a.b.a.c.a.c.a.a ENSGT00950000182879.a.b.b.a.b.a.c.b.a ENSGT00950000182879.a.b.b.a.b.b.a.b.b ENSGT00950000182879.a.b.b.a.b.b.a.b.a ENSGT00950000182879.a.b.b.a.b.b.b.b.b Zebra mbuna MODERN SPECIES 1105 SBNO2 (ENSMZEG00005010682) ENSMZEG00005010715 ARHGAP45 (ENSMZEG00005010755) POLR2E (ENSMZEG00005010796) gpx4a (ENSMZEG00005010823) PIP5K1C (ENSMZEG00005010892) rab11ba (ENSMZEG00005010947) marchf2 (ENSMZEG00005010963) ENSMZEG00005010975 stap2b (ENSMZEG00005010987) fsd1 (ENSMZEG00005011009) si:ch211-129c21.1 (ENSMZEG00005011031) scamp4 (ENSMZEG00005011050) chaf1a (ENSMZEG00005011071) ubxn6 (ENSMZEG00005011141) uap1 (ENSMZEG00005011153) ##22 DDR2 (ENSMZEG00005011178) hsd17b7 (ENSMZEG00005011230) serbp1a (ENSMZEG00005011260) il12rb2 (ENSMZEG00005011617) ENSMZEG00005011689 ENSMZEG00005011775 ENSMZEG00005016289 ENSMZEG00005016339 ENSMZEG00005016400 ENSMZEG00005016443 ENSMZEG00005017947 ENSMZEG00005018939 ENSMZEG00005018956 ENSMZEG00005018984 ENSMZEG00005018993 Eastern happy MODERN SPECIES 14 SBNO2 (ENSACLG00000005090) ENSACLG00000005193 ARHGAP45 (ENSACLG00000005229) POLR2E (ENSACLG00000005254) gpx4a (ENSACLG00000005282) PIP5K1C (ENSACLG00000005378) rab11ba (ENSACLG00000005420) marchf2 (ENSACLG00000005438) ENSACLG00000005446 stap2b (ENSACLG00000005464) fsd1 (ENSACLG00000005484) si:ch211-129c21.1 (ENSACLG00000005577) scamp4 (ENSACLG00000005608) chaf1a (ENSACLG00000005630) ubxn6 (ENSACLG00000005647) uap1 (ENSACLG00000005663) ##22 DDR2 (ENSACLG00000005714) hsd17b7 (ENSACLG00000005757) serbp1a (ENSACLG00000005768) il12rb2 (ENSACLG00000005783) ENSACLG00000005910 ENSACLG00000005946 ENSACLG00000006607 ENSACLG00000007732 ENSACLG00000007815 ENSACLG00000008118 ENSACLG00000008366 ENSACLG00000009351 ENSACLG00000009504 ENSACLG00000009776 ENSACLG00000009862 P. nyererei MODERN SPECIES 351 SBNO2 (ENSPNYG00000019926) tjp3 (ENSPNYG00000019859) ARHGAP45 (ENSPNYG00000019821) POLR2E (ENSPNYG00000019797) ENSPNYG00000019769 PIP5K1C (ENSPNYG00000019686) rab11ba (ENSPNYG00000019644) marchf2 (ENSPNYG00000019636) ENSPNYG00000019611 stap2b (ENSPNYG00000019588) fsd1 (ENSPNYG00000019516) si:ch211-129c21.1 (ENSPNYG00000019488) scamp4 (ENSPNYG00000019469) chaf1a (ENSPNYG00000019436) ubxn6 (ENSPNYG00000019420) uap1 (ENSPNYG00000019385) ##22 DDR2 (ENSPNYG00000019333) hsd17b7 (ENSPNYG00000019301) serbp1a (ENSPNYG00000019256) il12rb2 (ENSPNYG00000019216) ENSPNYG00000019186 ENSPNYG00000018704 ENSPNYG00000018095 ENSPNYG00000017505 ENSPNYG00000016993 ENSPNYG00000016918 ENSPNYG00000016468 ENSPNYG00000016383 ENSPNYG00000016358 ENSPNYG00000015826 ENSPNYG00000015320 Lyretail cichlid MODERN SPECIES 584 ENSNBRG00000023910 PIP5K1C (ENSNBRG00000023905) rab11ba (ENSNBRG00000023898) marchf2 (ENSNBRG00000023894) ENSNBRG00000023885 stap2b (ENSNBRG00000023872) fsd1 (ENSNBRG00000023844) si:ch211-129c21.1 (ENSNBRG00000023832) scamp4 (ENSNBRG00000023826) chaf1a (ENSNBRG00000023818) ubxn6 (ENSNBRG00000023812) uap1 (ENSNBRG00000023806) ##22 DDR2 (ENSNBRG00000023800) hsd17b7 (ENSNBRG00000023795) serbp1a (ENSNBRG00000023789) il12rb2 (ENSNBRG00000023770) ENSNBRG00000023756 ENSNBRG00000023700 ENSNBRG00000023633 Nile tilapia MODERN SPECIES 14 SBNO2 (ENSONIG00000002490) tjp3 (ENSONIG00000002505) ARHGAP45 (ENSONIG00000002512) POLR2E (ENSONIG00000002519) ENSONIG00000010276 PIP5K1C (ENSONIG00000002529) rab11ba (ENSONIG00000028579) march2 (ENSONIG00000033383) ENSONIG00000002544 stap2b (ENSONIG00000002548) fsd1 (ENSONIG00000002556) si:ch211-129c21.1 (ENSONIG00000002563) scamp4 (ENSONIG00000002570) chaf1a (ENSONIG00000002573) ubxn6 (ENSONIG00000042864) uap1 (ENSONIG00000002583) ##22 DDR2 (ENSONIG00000002591) hsd17b7 (ENSONIG00000002597) serbp1a (ENSONIG00000002600) il12rb2 (ENSONIG00000002601) ENSONIG00000042731 ENSONIG00000039651 ENSONIG00000030382 ENSONIG00000035577 ENSONIG00000027758 ENSONIG00000038279 ENSONIG00000034197 ENSONIG00000038345 ENSONIG00000042533 ENSONIG00000034784 ENSONIG00000038678 Midas cichlid MODERN SPECIES 505 SBNO2 (ENSACIG00000024368) ENSACIG00000024369 ARHGAP45 (ENSACIG00000024370) POLR2E (ENSACIG00000024371) gpx4a (ENSACIG00000024372) PIP5K1C (ENSACIG00000024373) rab11ba (ENSACIG00000024374) marchf2 (ENSACIG00000024375) ENSACIG00000024376 stap2b (ENSACIG00000024377) fsd1 (ENSACIG00000024378) si:ch211-129c21.1 (ENSACIG00000024379) scamp4 (ENSACIG00000024380) chaf1a (ENSACIG00000024381) ubxn6 (ENSACIG00000024382) uap1 (ENSACIG00000024383) ##22 DDR2 (ENSACIG00000024384) hsd17b7 (ENSACIG00000024385) serbp1a (ENSACIG00000024386) il12rb2 (ENSACIG00000024387) ENSACIG00000024388 ENSACIG00000024389 Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000170739 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.a ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.b.b ENSGT00950000182879.a.b.b.b.a.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 Aplocheiloidei ANCESTRAL SPECIES 3 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.b.a.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 Mangrove rivulus MODERN SPECIES 8 SBNO2 (ENSKMAG00000005541) tjp3 (ENSKMAG00000005798) ARHGAP45 (ENSKMAG00000005916) POLR2E (ENSKMAG00000005954) PIP5K1C (ENSKMAG00000005999) rab11ba (ENSKMAG00000006082) marchf2 (ENSKMAG00000006111) gpx4a (ENSKMAG00000006135) ENSKMAG00000006170 ENSKMAG00000006179 fsd1 (ENSKMAG00000006206) si:ch211-129c21.1 (ENSKMAG00000006271) scamp4 (ENSKMAG00000006302) chaf1a (ENSKMAG00000006384) ubxn6 (ENSKMAG00000006466) uap1 (ENSKMAG00000006502) ##22 DDR2 (ENSKMAG00000006594) hsd17b7 (ENSKMAG00000006671) serbp1a (ENSKMAG00000006722) ENSKMAG00000006752 il23r (ENSKMAG00000006774) ENSKMAG00000006796 ENSKMAG00000006851 ENSKMAG00000007035 ENSKMAG00000007096 ENSKMAG00000007142 ENSKMAG00000007176 ENSKMAG00000007411 cyp2n13 (ENSKMAG00000007531) cyp2n13 (ENSKMAG00000007588) hook1 (ENSKMAG00000007644) Turquoise killifish MODERN SPECIES 1626 tjp3 (ENSNFUG00015007703) ARHGAP45 (ENSNFUG00015007804) POLR2E (ENSNFUG00015008738) ENSNFUG00015008747 ENSNFUG00015008750 PIP5K1CA (ENSNFUG00015008755) rab11ba (ENSNFUG00015008781) ENSNFUG00015008809 MARCH2 (ENSNFUG00015008870) ENSNFUG00015008879 FSD1 (ENSNFUG00015008936) Nfu_g_1_016014 (ENSNFUG00015009142) scamp4 (ENSNFUG00015009164) CHAF1A (ENSNFUG00015009179) UBXN6 (ENSNFUG00015009225) uap1 (ENSNFUG00015009448) ##22 DDR2 (ENSNFUG00015009566) HSD17B7 (ENSNFUG00015010348) SERBP1 (ENSNFUG00015010402) il12rb2 (ENSNFUG00015010436) ENSNFUG00015010453 echdc2 (ENSNFUG00015010470) zyg11 (ENSNFUG00015010519) SELRC1 (ENSNFUG00015010621) ralgps2 (ENSNFUG00015010658) ANGPTL1 (ENSNFUG00015010904) FAM20B (ENSNFUG00015010912) ENSNFUG00015010922 ENSNFUG00015010982 scfd2 (ENSNFUG00015011763) ENSNFUG00015011791 Cyprinodontoidei ANCESTRAL SPECIES 10 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.a ENSGT00950000182879.a.b.b.b.a.b.a ENSGT00950000182879.a.b.b.b.a.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b.c.a ENSGT00950000182879.a.b.a.a.b.a.g.b.c.b ENSGT00950000182879.a.b.a.a.b.a.g.b.d ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a Poeciliinae ANCESTRAL SPECIES 7 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659.l ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000158992 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.b.b.c ENSGT00950000182879.a.b.b.b.b.d.a ENSGT00950000182879.a.b.b.b.a.b.a ENSGT00950000182879.a.b.b.b.a.b.b ENSGT00950000182879.a.b.b.b.a.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b.c.a ENSGT00950000182879.a.b.a.a.b.a.g.b.c.b ENSGT00950000182879.a.b.a.a.b.a.g.b.d ENSGT00950000182879.a.b.a.a.b.a.g.a Poecilia ANCESTRAL SPECIES 1 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659.l ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000158992 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.b.b.c ENSGT00950000182879.a.b.b.b.b.d.a ENSGT00950000182879.a.b.b.b.a.b.a ENSGT00950000182879.a.b.b.b.a.b.b ENSGT00950000182879.a.b.b.b.a.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b.c.a ENSGT00950000182879.a.b.a.a.b.a.g.b.c.b ENSGT00950000182879.a.b.a.a.b.a.g.b.d ENSGT00950000182879.a.b.a.a.b.a.g.a NAME_6 ANCESTRAL SPECIES 15 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659.l ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000158992 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.b.b.c.b ENSGT00950000182879.a.b.b.b.b.c.a ENSGT00950000182879.a.b.b.b.b.d.a ENSGT00950000182879.a.b.b.b.a.b.b ENSGT00950000182879.a.b.b.b.a.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b.c.a ENSGT00950000182879.a.b.a.a.b.a.g.b.c.b ENSGT00950000182879.a.b.a.a.b.a.g.b.d ENSGT00950000182879.a.b.a.a.b.a.g.a Sailfin molly MODERN SPECIES 356 gpx4a (ENSPLAG00000014459) PIP5K1C (ENSPLAG00000014355) rab11ba (ENSPLAG00000014243) marchf2 (ENSPLAG00000014223) ENSPLAG00000014207 stap2b (ENSPLAG00000014188) fsd1 (ENSPLAG00000014175) si:ch211-129c21.1 (ENSPLAG00000014124) scamp4 (ENSPLAG00000014115) chaf1a (ENSPLAG00000014093) ubxn6 (ENSPLAG00000014086) ENSPLAG00000014080 ENSPLAG00000014016 ENSPLAG00000013998 ENSPLAG00000013987 uap1 (ENSPLAG00000013966) ##22 DDR2 (ENSPLAG00000013923) hsd17b7 (ENSPLAG00000013917) serbp1a (ENSPLAG00000013912) il12rb2 (ENSPLAG00000013899) ENSPLAG00000013859 ENSPLAG00000013825 ENSPLAG00000013799 ENSPLAG00000013748 ENSPLAG00000013145 ENSPLAG00000013110 Amazon molly MODERN SPECIES 665 SBNO2 (ENSPFOG00000004096) tjp3 (ENSPFOG00000004984) ARHGAP45 (ENSPFOG00000005406) POLR2E (ENSPFOG00000005734) ENSPFOG00000005793 PIP5K1C (ENSPFOG00000005815) rab11ba (ENSPFOG00000006159) marchf2 (ENSPFOG00000006218) ENSPFOG00000006224 stap2b (ENSPFOG00000006279) fsd1 (ENSPFOG00000006360) si:ch211-129c21.1 (ENSPFOG00000006680) scamp4 (ENSPFOG00000006940) chaf1a (ENSPFOG00000006963) ubxn6 (ENSPFOG00000007026) uap1 (ENSPFOG00000024685) ##22 DDR2 (ENSPFOG00000007058) hsd17b7 (ENSPFOG00000007589) serbp1a (ENSPFOG00000007643) il12rb2 (ENSPFOG00000007735) il23r (ENSPFOG00000024170) Guppy MODERN SPECIES 456 tjp3 (ENSPREG00000006711) ARHGAP45 (ENSPREG00000006545) POLR2E (ENSPREG00000006489) GPX4 (ENSPREG00000006468) PIP5K1C (ENSPREG00000006402) rab11ba (ENSPREG00000006357) marchf2 (ENSPREG00000006351) ENSPREG00000006336 stap2b (ENSPREG00000006310) fsd1 (ENSPREG00000006259) si:ch211-129c21.1 (ENSPREG00000006188) scamp4 (ENSPREG00000006161) chaf1a (ENSPREG00000006130) ubxn6 (ENSPREG00000006078) DNAH8 (ENSPREG00000005886) uap1 (ENSPREG00000005807) ##22 DDR2 (ENSPREG00000005719) hsd17b7 (ENSPREG00000005679) serbp1a (ENSPREG00000005659) il12rb2 (ENSPREG00000005625) ENSPREG00000005591 ENSPREG00000005561 ENSPREG00000005547 ENSPREG00000005372 ENSPREG00000004573 ENSPREG00000004077 ENSPREG00000004024 cyp2ad2 (ENSPREG00000003998) cyp2n13 (ENSPREG00000003454) cyp2n13 (ENSPREG00000002902) cyp2n13 (ENSPREG00000002812) Platyfish MODERN SPECIES 23 gpx4a (ENSXMAG00000012006) ENSXMAG00000011962 rab11ba (ENSXMAG00000013416) marchf2 (ENSXMAG00000026178) ENSXMAG00000024840 stap2b (ENSXMAG00000011916) fsd1 (ENSXMAG00000011902) si:ch211-129c21.1 (ENSXMAG00000011886) scamp4 (ENSXMAG00000011870) chaf1a (ENSXMAG00000011864) ubxn6 (ENSXMAG00000011842) ENSXMAG00000021090 ENSXMAG00000024886 ENSXMAG00000027562 ENSXMAG00000023540 uap1 (ENSXMAG00000011735) ##22 DDR2 (ENSXMAG00000011693) hsd17b7 (ENSXMAG00000011686) serbp1a (ENSXMAG00000011677) il12rb2 (ENSXMAG00000011674) ENSXMAG00000011673 ENSXMAG00000011672 ENSXMAG00000011668 ENSXMAG00000011671 ENSXMAG00000011670 ENSXMAG00000028094 cyp2ad2 (ENSXMAG00000027480) cyp2n13 (ENSXMAG00000024113) cyp2n13 (ENSXMAG00000011645) cyp2n13 (ENSXMAG00000024505) hook1 (ENSXMAG00000011589) NAME_4 ANCESTRAL SPECIES 110 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b.a Mummichog MODERN SPECIES 2290 tjp3 (ENSFHEG00000022318) ARHGAP45 (ENSFHEG00000022345) POLR2E (ENSFHEG00000022398) gpx4b (ENSFHEG00000022574) PIP5K1C (ENSFHEG00000022625) rab11ba (ENSFHEG00000022642) marchf2 (ENSFHEG00000022646) ENSFHEG00000022676 stap2b (ENSFHEG00000022718) fsd1 (ENSFHEG00000022728) si:ch211-129c21.1 (ENSFHEG00000022731) scamp4 (ENSFHEG00000022755) ENSFHEG00000022769 chaf1a (ENSFHEG00000022780) ubxn6 (ENSFHEG00000022786) uap1 (ENSFHEG00000022839) ##22 DDR2 (ENSFHEG00000022871) ENSFHEG00000022888 hsd17b7 (ENSFHEG00000023222) serbp1a (ENSFHEG00000001151) il12rb2 (ENSFHEG00000001163) ENSFHEG00000001169 Sheepshead minnow MODERN SPECIES 995 ubxn6 (ENSCVAG00000010720) uap1 (ENSCVAG00000010709) ##22 DDR2 (ENSCVAG00000010641) hsd17b7 (ENSCVAG00000000292) serbp1a (ENSCVAG00000010534) il12rb2 (ENSCVAG00000010531) ENSCVAG00000010522 ENSCVAG00000010513 ENSCVAG00000010504 ENSCVAG00000010442 ENSCVAG00000010160 ENSCVAG00000009827 Oryzias ANCESTRAL SPECIES 5 ENSGT00940000156577.a ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.b.a.c.a ENSGT00950000182879.a.b.b.b.a.c.b ENSGT00950000182879.a.b.b.b.a.d ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b.f ENSGT00950000182879.a.b.a.a.b.a.g.b.e ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 Oryzias_a ANCESTRAL SPECIES 24 ENSGT00940000156577.a ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.b.a.c.a ENSGT00950000182879.a.b.b.b.a.c.b ENSGT00950000182879.a.b.b.b.a.d ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b.f ENSGT00950000182879.a.b.a.a.b.a.g.b.e ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 Japanese Medaka HdrR MODERN SPECIES 18 amotl2a (ENSORLG00000015457) tjp3 (ENSORLG00000015436) ARHGAP45 (ENSORLG00000015393) POLR2E (ENSORLG00000015346) ENSORLG00000015339 PIP5K1C (ENSORLG00000015327) rab11ba (ENSORLG00000015307) marchf2 (ENSORLG00000015303) ENSORLG00000015284 ENSORLG00000026413 fsd1 (ENSORLG00000015253) si:ch211-129c21.1 (ENSORLG00000015228) scamp4 (ENSORLG00000029740) chaf1a (ENSORLG00000015193) ubxn6 (ENSORLG00000015178) uap1 (ENSORLG00000015154) ##22 DDR2 (ENSORLG00000015116) hsd17b7 (ENSORLG00000015071) serbp1a (ENSORLG00000015043) il12rb2 (ENSORLG00000015026) ENSORLG00000027349 cyp2p3 (ENSORLG00000015011) ENSORLG00000014936 ENSORLG00000028232 cyp2ad2 (ENSORLG00000014913) cyp2n13 (ENSORLG00000014891) cyp2n13 (ENSORLG00000014869) cyp2n13 (ENSORLG00000021869) hook1 (ENSORLG00000014822) ENSORLG00000014802 pfas (ENSORLG00000014791) Chinese medaka MODERN SPECIES 95 ENSOSIG00000017072 GPR17 (ENSOSIG00000017791) sap130a (ENSOSIG00000017881) amotl2a (ENSOSIG00000017883) tjp3 (ENSOSIG00000017907) ARHGAP45 (ENSOSIG00000017940) rab11ba (ENSOSIG00000018167) marchf2 (ENSOSIG00000018172) ENSOSIG00000018181 ENSOSIG00000018188 fsd1 (ENSOSIG00000018201) si:ch211-129c21.1 (ENSOSIG00000018282) scamp4 (ENSOSIG00000018305) chaf1a (ENSOSIG00000018315) ubxn6 (ENSOSIG00000018409) uap1 (ENSOSIG00000018439) ##22 DDR2 (ENSOSIG00000018474) hsd17b7 (ENSOSIG00000018658) serbp1a (ENSOSIG00000018661) il12rb2 (ENSOSIG00000018664) ENSOSIG00000018667 cyp2ad3 (ENSOSIG00000018672) cyp2p6 (ENSOSIG00000000158) cyp2n13 (ENSOSIG00000000503) hook1 (ENSOSIG00000001083) ENSOSIG00000003600 pfas (ENSOSIG00000003624) IPO13 (ENSOSIG00000004054) ENSOSIG00000004343 Oryzias_b ANCESTRAL SPECIES 26 ENSGT00940000156577.a ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.b.a.c.a ENSGT00950000182879.a.b.b.b.a.c.b ENSGT00950000182879.a.b.b.b.a.d ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b.f ENSGT00950000182879.a.b.a.a.b.a.g.b.e ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 Javanese ricefish MODERN SPECIES 18 amotl2a (ENSOJAG00000000111) tjp3 (ENSOJAG00000000075) ARHGAP45 (ENSOJAG00000012312) POLR2E (ENSOJAG00000012258) ENSOJAG00000012200 PIP5K1C (ENSOJAG00000011858) ENSOJAG00000011713 marchf2 (ENSOJAG00000011638) ENSOJAG00000011571 ENSOJAG00000011563 fsd1 (ENSOJAG00000011289) si:ch211-129c21.1 (ENSOJAG00000011106) scamp4 (ENSOJAG00000011088) chaf1a (ENSOJAG00000010834) ubxn6 (ENSOJAG00000010684) uap1 (ENSOJAG00000010356) ##22 DDR2 (ENSOJAG00000010035) hsd17b7 (ENSOJAG00000009979) serbp1a (ENSOJAG00000009965) il12rb2 (ENSOJAG00000009941) ENSOJAG00000009859 ENSOJAG00000009646 ENSOJAG00000009413 cyp2ad2 (ENSOJAG00000009343) cyp2n13 (ENSOJAG00000009127) cyp2n13 (ENSOJAG00000009095) hook1 (ENSOJAG00000008708) ENSOJAG00000008627 IPO13 (ENSOJAG00000006797) ENSOJAG00000006724 mmachc (ENSOJAG00000006712) Indian medaka MODERN SPECIES 13 ENSOMEG00000002768 tjp3 (ENSOMEG00000000054) ARHGAP45 (ENSOMEG00000002732) POLR2E (ENSOMEG00000002709) ENSOMEG00000002677 PIP5K1C (ENSOMEG00000002623) rab11ba (ENSOMEG00000002581) marchf2 (ENSOMEG00000002567) ENSOMEG00000002562 ENSOMEG00000002541 fsd1 (ENSOMEG00000002522) si:ch211-129c21.1 (ENSOMEG00000002494) scamp4 (ENSOMEG00000002484) chaf1a (ENSOMEG00000002469) ubxn6 (ENSOMEG00000002453) uap1 (ENSOMEG00000000042) ##22 DDR2 (ENSOMEG00000002398) hsd17b7 (ENSOMEG00000002364) serbp1a (ENSOMEG00000002349) il12rb2 (ENSOMEG00000002340) ENSOMEG00000002325 ENSOMEG00000002314 ENSOMEG00000002301 ENSOMEG00000002282 ENSOMEG00000002266 ENSOMEG00000002255 ENSOMEG00000002241 cyp2ad2 (ENSOMEG00000002207) cyp2n13 (ENSOMEG00000002182) cyp2n13 (ENSOMEG00000000783) ENSOMEG00000002062 Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 Eupercaria ANCESTRAL SPECIES 8 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.h ENSGT00940000158995.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000160836.d.b.b ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000167690 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT00390000003464 ENSGT00940000156906.j.a.a Fugu MODERN SPECIES 12 ARHGAP45 (ENSTRUG00000018228) POLR2E (ENSTRUG00000018238) gpx4b (ENSTRUG00000018245) PIP5K1C (ENSTRUG00000018248) ENSTRUG00000022029 marchf2 (ENSTRUG00000030753) ENSTRUG00000021614 stap2b (ENSTRUG00000018287) fsd1 (ENSTRUG00000018292) ENSTRUG00000025996 si:ch211-129c21.1 (ENSTRUG00000025380) scamp4 (ENSTRUG00000018301) chaf1a (ENSTRUG00000018302) ubxn6 (ENSTRUG00000018309) fmo (ENSTRUG00000018321) uap1 (ENSTRUG00000018335) ##22 DDR2 (ENSTRUG00000018340) hsd17b7 (ENSTRUG00000018364) serbp1a (ENSTRUG00000018368) ENSTRUG00000030488 ENSTRUG00000018372 cyp2p6 (ENSTRUG00000018373) cyp2ad2 (ENSTRUG00000020610) cyp2n13 (ENSTRUG00000018407) cyp2n13 (ENSTRUG00000018418) ENSTRUG00000018419 ENSTRUG00000028289 pfas (ENSTRUG00000018433) IPO13 (ENSTRUG00000018436) mmachc (ENSTRUG00000018443) ENSTRUG00000018444 Tetraodon MODERN SPECIES tjp3 (ENSTNIG00000013189) ARHGAP45 (ENSTNIG00000013188) POLR2E (ENSTNIG00000013187) ENSTNIG00000013186 PIP5K1C (ENSTNIG00000013185) ENSTNIG00000013184 marchf2 (ENSTNIG00000013183) ENSTNIG00000013182 ENSTNIG00000013181 fsd1 (ENSTNIG00000013180) si:ch211-129c21.1 (ENSTNIG00000013179) scamp4 (ENSTNIG00000013178) chaf1a (ENSTNIG00000013177) ubxn6 (ENSTNIG00000013176) ENSTNIG00000013175 uap1 (ENSTNIG00000013174) ##22 DDR2 (ENSTNIG00000013173) hsd17b7 (ENSTNIG00000013172) serbp1a (ENSTNIG00000013171) il12rb2 (ENSTNIG00000001805) ENSTNIG00000001804 ENSTNIG00000000727 ENSTNIG00000001576 ENSTNIG00000013170 cyp2ad2 (ENSTNIG00000013169) cyp2n13 (ENSTNIG00000010866) cyp2n13 (ENSTNIG00000010865) ENSTNIG00000010864 ENSTNIG00000010863 pfas (ENSTNIG00000010862) IPO13 (ENSTNIG00000010861) Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 Ballan wrasse MODERN SPECIES 497 rab11ba (ENSLBEG00000006087) marchf2 (ENSLBEG00000006033) ENSLBEG00000005981 ENSLBEG00000005932 fsd1 (ENSLBEG00000005871) si:ch211-129c21.1 (ENSLBEG00000005828) scamp4 (ENSLBEG00000005803) chaf1a (ENSLBEG00000005685) ubxn6 (ENSLBEG00000005614) uap1 (ENSLBEG00000005520) ##22 DDR2 (ENSLBEG00000005422) hsd17b7 (ENSLBEG00000005341) serbp1a (ENSLBEG00000005289) il12rb2 (ENSLBEG00000005259) ENSLBEG00000005222 ENSLBEG00000005207 ENSLBEG00000004771 ENSLBEG00000004212 ENSLBEG00000003658 Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 European seabass MODERN SPECIES 17 tm6sf2b (ENSDLAG00005014398) ENSDLAG00005014474 tjp3 (ENSDLAG00005015783) ENSDLAG00005015927 ENSDLAG00005030390 ENSDLAG00005016577 ENSDLAG00005028338 ENSDLAG00005027338 ENSDLAG00005030419 ENSDLAG00005027138 ENSDLAG00005017525 si:ch211-129c21.1 (ENSDLAG00005017682) scamp4 (ENSDLAG00005026827) chaf1a (ENSDLAG00005017698) ubxn6 (ENSDLAG00005017721) uap1 (ENSDLAG00005017768) ##22 ENSDLAG00005030851 ENSDLAG00005033891 hsd17b7 (ENSDLAG00005018188) serbp1a (ENSDLAG00005018281) il12rb2 (ENSDLAG00005018307) ENSDLAG00005018334 ENSDLAG00005018361 ENSDLAG00005018472 ENSDLAG00005016291 ENSDLAG00005019168 ENSDLAG00005029009 ENSDLAG00005018196 ENSDLAG00005030565 cyp2n13 (ENSDLAG00005031306) cyp2n13 (ENSDLAG00005018797) Large yellow croaker MODERN SPECIES 489 tjp3 (ENSLCRG00005013525) ARHGAP45 (ENSLCRG00005010869) POLR2E (ENSLCRG00005010845) ENSLCRG00005010838 ENSLCRG00005010836 PIP5K1C (ENSLCRG00005010821) ENSLCRG00005010771 marchf2 (ENSLCRG00005010768) ENSLCRG00005010733 stap2b (ENSLCRG00005010729) fsd1 (ENSLCRG00005010479) si:ch211-129c21.1 (ENSLCRG00005010474) scamp4 (ENSLCRG00005010467) chaf1a (ENSLCRG00005010464) ubxn6 (ENSLCRG00005010461) uap1 (ENSLCRG00005009993) ##22 DDR2 (ENSLCRG00005009764) hsd17b7 (ENSLCRG00005009755) serbp1a (ENSLCRG00005009754) il12rb2 (ENSLCRG00005009750) ENSLCRG00005009743 cyp2p6 (ENSLCRG00005009714) cyp2ad2 (ENSLCRG00005009712) cyp2n13 (ENSLCRG00005009708) cyp2n13 (ENSLCRG00005009523) cyp2n13 (ENSLCRG00005009514) ENSLCRG00005009497 hook1 (ENSLCRG00005008409) ENSLCRG00005008387 pfas (ENSLCRG00005008379) IPO13 (ENSLCRG00005007800) Gilthead seabream MODERN SPECIES 2 SBNO2 (ENSSAUG00010004636) tjp3 (ENSSAUG00010004595) ARHGAP45 (ENSSAUG00010002870) POLR2E (ENSSAUG00010002703) GPX4a (ENSSAUG00010002689) PIP5K1C (ENSSAUG00010002590) ENSSAUG00010002528 marchf2 (ENSSAUG00010002517) ENSSAUG00010002477 stap2b (ENSSAUG00010002471) fsd1 (ENSSAUG00010001434) si:ch211-129c21.1 (ENSSAUG00010001339) scamp4 (ENSSAUG00010001324) chaf1a (ENSSAUG00010001309) ubxn6 (ENSSAUG00010013663) uap1 (ENSSAUG00010013654) ##22 DDR2 (ENSSAUG00010013526) hsd17b7 (ENSSAUG00010013522) serbp1a (ENSSAUG00010013520) il12rb2 (ENSSAUG00010013514) ENSSAUG00010013509 ENSSAUG00010013489 ENSSAUG00010013483 cyp2ad2 (ENSSAUG00010013482) cyp2n13 (ENSSAUG00010013472) cyp2n13 (ENSSAUG00010013461) hook1 (ENSSAUG00010013403) ENSSAUG00010013397 pfas (ENSSAUG00010011449) IPO13 (ENSSAUG00010009758) ENSSAUG00010009730 Perciformes ANCESTRAL SPECIES 8 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 Perciformes_a ANCESTRAL SPECIES 6 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 Pike perch MODERN SPECIES 34 SBNO2 (ENSSLUG00000014942) tjp3 (ENSSLUG00000015106) ARHGAP45 (ENSSLUG00000015210) POLR2E (ENSSLUG00000015773) gpx4b (ENSSLUG00000001474) PIP5K1C (ENSSLUG00000001546) ENSSLUG00000001628 marchf2 (ENSSLUG00000001696) ENSSLUG00000001708 stap2b (ENSSLUG00000001757) fsd1 (ENSSLUG00000001801) si:ch211-129c21.1 (ENSSLUG00000001831) scamp4 (ENSSLUG00000001841) chaf1a (ENSSLUG00000001864) ubxn6 (ENSSLUG00000001897) uap1 (ENSSLUG00000001973) ##22 DDR2 (ENSSLUG00000002178) hsd17b7 (ENSSLUG00000002265) serbp1a (ENSSLUG00000002274) il12rb2 (ENSSLUG00000002283) il23r (ENSSLUG00000002297) cyp2p6 (ENSSLUG00000002333) cyp2ad2 (ENSSLUG00000002615) cyp2n13 (ENSSLUG00000002946) hook1 (ENSSLUG00000003437) cyp2n13 (ENSSLUG00000003456) hook1 (ENSSLUG00000003670) ENSSLUG00000005331 pfas (ENSSLUG00000005485) IPO13 (ENSSLUG00000007502) ENSSLUG00000008027 Channel bull blenny MODERN SPECIES 18 ENSCGOG00000009472 tjp3 (ENSCGOG00000009463) ARHGAP45 (ENSCGOG00000008902) POLR2E (ENSCGOG00000008693) gpx4b (ENSCGOG00000008676) PIP5K1C (ENSCGOG00000006876) rab11ba (ENSCGOG00000006718) marchf2 (ENSCGOG00000006710) ENSCGOG00000006672 stap2b (ENSCGOG00000006669) fsd1 (ENSCGOG00000006417) si:ch211-129c21.1 (ENSCGOG00000006397) scamp4 (ENSCGOG00000006393) chaf1a (ENSCGOG00000006388) ubxn6 (ENSCGOG00000006305) uap1 (ENSCGOG00000006032) ##22 DDR2 (ENSCGOG00000005853) hsd17b7 (ENSCGOG00000005828) serbp1a (ENSCGOG00000005820) il12rb2 (ENSCGOG00000005818) ENSCGOG00000005804 ENSCGOG00000005746 cyp2ad2 (ENSCGOG00000005139) ENSCGOG00000005038 cyp2n13 (ENSCGOG00000004970) cyp2n13 (ENSCGOG00000004856) cyp2n13 (ENSCGOG00000004847) hook1 (ENSCGOG00000004684) ENSCGOG00000004676 pfas (ENSCGOG00000003561) IPO13 (ENSCGOG00000003263) Cottioidei ANCESTRAL SPECIES 5 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000158995.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT00390000003464 ENSGT00940000156906.j.a.a ENSGT00940000158798 Lumpfish MODERN SPECIES 19 SBNO2 (ENSCLMG00005000780) tjp3 (ENSCLMG00005001533) ARHGAP45 (ENSCLMG00005001826) POLR2E (ENSCLMG00005007020) ENSCLMG00005007028 PIP5K1C (ENSCLMG00005007030) ENSCLMG00005007178 marchf2 (ENSCLMG00005007179) ENSCLMG00005007180 stap2b (ENSCLMG00005007183) fsd1 (ENSCLMG00005007185) si:ch211-129c21.1 (ENSCLMG00005007188) scamp4 (ENSCLMG00005007191) chaf1a (ENSCLMG00005007194) ubxn6 (ENSCLMG00005007308) uap1 (ENSCLMG00005007686) ##22 DDR2 (ENSCLMG00005007715) hsd17b7 (ENSCLMG00005008184) serbp1a (ENSCLMG00005008195) il12rb2 (ENSCLMG00005008196) ENSCLMG00005008198 cyp2p6 (ENSCLMG00005008204) cyp2ad2 (ENSCLMG00005008459) cyp2n13 (ENSCLMG00005008735) NEK1 (ENSCLMG00005010333) sh3rf1 (ENSCLMG00005010348) cbr4 (ENSCLMG00005010349) PALLD (ENSCLMG00005010353) anapc4 (ENSCLMG00005010527) slain2 (ENSCLMG00005012046) SLC10A4 (ENSCLMG00005012048) Stickleback MODERN SPECIES 8 ppat (ENSGACG00000014340) ENSGACG00000014343 CARMIL3 (ENSGACG00000014346) ENSGACG00000014359 ENSGACG00000014362 ENSGACG00000014368 ENSGACG00000014370 ENSGACG00000014374 fsd1 (ENSGACG00000014380) ENSGACG00000014402 si:ch211-129c21.1 (ENSGACG00000014404) scamp4 (ENSGACG00000014412) chaf1a (ENSGACG00000014428) ENSGACG00000014430 ubxn6 (ENSGACG00000014431) uap1 (ENSGACG00000014445) ##22 DDR2 (ENSGACG00000014457) serbp1a (ENSGACG00000014467) il12rb2 (ENSGACG00000014528) cyp2p7 (ENSGACG00000014531) cyp2n13 (ENSGACG00000014535) hook1 (ENSGACG00000014545) IPO13 (ENSGACG00000014562) mmachc (ENSGACG00000014565) echdc2 (ENSGACG00000014569) zyg11 (ENSGACG00000014574) coa7 (ENSGACG00000014584) ralgps2 (ENSGACG00000014587) angptl1a (ENSGACG00000014590) fam20b (ENSGACG00000014604) jun (ENSGACG00000014608) Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 Carangaria ANCESTRAL SPECIES 7 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 Pleuronectoidei ANCESTRAL SPECIES 29 ENSGT00390000013841 ENSGT00940000165680.A ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00940000163126.a.b.h ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 Turbot MODERN SPECIES 3 ENSSMAG00000012489 tjp3 (ENSSMAG00000012656) ENSSMAG00000012720 ENSSMAG00000012782 ENSSMAG00000012809 ENSSMAG00000012826 ENSSMAG00000018613 ENSSMAG00000018632 ENSSMAG00000022469 ENSSMAG00000018573 ENSSMAG00000018528 si:ch211-129c21.1 (ENSSMAG00000018515) scamp4 (ENSSMAG00000018501) chaf1a (ENSSMAG00000018482) ubxn6 (ENSSMAG00000018472) uap1 (ENSSMAG00000018456) ##22 ENSSMAG00000018395 serbp1a (ENSSMAG00000018372) il12rb2 (ENSSMAG00000018366) ENSSMAG00000026117 il23r (ENSSMAG00000018352) cyp2p6 (ENSSMAG00000018344) cyp2ad2 (ENSSMAG00000018341) cyp2n13 (ENSSMAG00000018331) cyp2n13 (ENSSMAG00000018325) hook1 (ENSSMAG00000018281) ENSSMAG00000018268 pfas (ENSSMAG00000018198) ENSSMAG00000018046 ENSSMAG00000031460 ENSSMAG00000018003 Tongue sole MODERN SPECIES 11 SBNO2 (ENSCSEG00000006856) tjp3 (ENSCSEG00000006942) ARHGAP45 (ENSCSEG00000007060) POLR2E (ENSCSEG00000007107) rab11ba (ENSCSEG00000007121) marchf2 (ENSCSEG00000007136) gpx4a (ENSCSEG00000007167) PIP5K1C (ENSCSEG00000007222) ENSCSEG00000007239 ENSCSEG00000007249 fsd1 (ENSCSEG00000007260) si:ch211-129c21.1 (ENSCSEG00000007288) scamp4 (ENSCSEG00000007313) chaf1a (ENSCSEG00000007318) ubxn6 (ENSCSEG00000007338) uap1 (ENSCSEG00000007365) ##22 DDR2 (ENSCSEG00000007389) hsd17b7 (ENSCSEG00000007452) serbp1a (ENSCSEG00000007473) ENSCSEG00000007482 faslg (ENSCSEG00000007485) ENSCSEG00000007493 echdc2 (ENSCSEG00000007501) zyg11 (ENSCSEG00000007515) coa7 (ENSCSEG00000007558) ralgps2 (ENSCSEG00000007585) angptl1a (ENSCSEG00000007645) fam20b (ENSCSEG00000007654) mmachc (ENSCSEG00000007667) ENSCSEG00000007680 ENSCSEG00000007699 Carangaria_A ANCESTRAL SPECIES 3 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 Seriola ANCESTRAL SPECIES 21 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 Greater amberjack MODERN SPECIES 110 SBNO2 (ENSSDUG00000003527) tjp3 (ENSSDUG00000003464) ARHGAP45 (ENSSDUG00000003398) POLR2E (ENSSDUG00000003352) gpx4a (ENSSDUG00000003134) PIP5K1C (ENSSDUG00000003016) rab11ba (ENSSDUG00000002965) marchf2 (ENSSDUG00000002943) ENSSDUG00000002934 ENSSDUG00000002896 fsd1 (ENSSDUG00000002877) si:ch211-129c21.1 (ENSSDUG00000002808) scamp4 (ENSSDUG00000002782) chaf1a (ENSSDUG00000002692) ubxn6 (ENSSDUG00000002654) uap1 (ENSSDUG00000002609) ##22 DDR2 (ENSSDUG00000002557) hsd17b7 (ENSSDUG00000002521) serbp1a (ENSSDUG00000002481) il12rb2 (ENSSDUG00000002457) ENSSDUG00000002420 cyp2p6 (ENSSDUG00000002402) cyp2ad2 (ENSSDUG00000002386) cyp2n13 (ENSSDUG00000001817) cyp2n13 (ENSSDUG00000001630) hook1 (ENSSDUG00000001523) ENSSDUG00000001487 pfas (ENSSDUG00000001342) IPO13 (ENSSDUG00000001233) ENSSDUG00000001213 ENSSDUG00000001199 Yellowtail amberjack MODERN SPECIES 2677 SBNO2 (ENSSLDG00000004623) tjp3 (ENSSLDG00000004734) ARHGAP45 (ENSSLDG00000004808) POLR2E (ENSSLDG00000004965) gpx4a (ENSSLDG00000005019) PIP5K1C (ENSSLDG00000005123) rab11ba (ENSSLDG00000005221) marchf2 (ENSSLDG00000005251) ENSSLDG00000005275 stap2b (ENSSLDG00000005300) fsd1 (ENSSLDG00000005330) si:ch211-129c21.1 (ENSSLDG00000005355) scamp4 (ENSSLDG00000005492) chaf1a (ENSSLDG00000005531) ubxn6 (ENSSLDG00000005723) uap1 (ENSSLDG00000005767) ##22 DDR2 (ENSSLDG00000005869) hsd17b7 (ENSSLDG00000005949) serbp1a (ENSSLDG00000005983) ENSSLDG00000006070 cyp2p6 (ENSSLDG00000006265) ENSSLDG00000006282 cyp2n13 (ENSSLDG00000006366) cyp2n13 (ENSSLDG00000006741) hook1 (ENSSLDG00000007232) ENSSLDG00000007294 pfas (ENSSLDG00000007323) IPO13 (ENSSLDG00000007412) ENSSLDG00000007468 ENSSLDG00000007488 mmachc (ENSSLDG00000007508) Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 117 SBNO2 (ENSLCAG00010010136) tjp3 (ENSLCAG00010010039) ARHGAP45 (ENSLCAG00010009991) POLR2E (ENSLCAG00010009937) GPX4 (ENSLCAG00010009902) PIP5K1C (ENSLCAG00010009759) ENSLCAG00010009646 marchf2 (ENSLCAG00010009622) ENSLCAG00010009549 ENSLCAG00010009530 fsd1 (ENSLCAG00010009482) si:ch211-129c21.1 (ENSLCAG00010009466) scamp4 (ENSLCAG00010009459) chaf1a (ENSLCAG00010009454) ubxn6 (ENSLCAG00010009444) uap1 (ENSLCAG00010009388) ##22 DDR2 (ENSLCAG00010009354) hsd17b7 (ENSLCAG00010009344) serbp1a (ENSLCAG00010009339) ENSLCAG00010009335 ENSLCAG00010009325 ENSLCAG00010009217 ENSLCAG00010009182 cyp2ad2 (ENSLCAG00010009170) cyp2n13 (ENSLCAG00010009117) cyp2n13 (ENSLCAG00010009097) hook1 (ENSLCAG00010009019) ENSLCAG00010008989 pfas (ENSLCAG00010008947) IPO13 (ENSLCAG00010008737) ENSLCAG00010008683 Barramundi perch MODERN SPECIES 926 scamp4 (ENSLCAG00010002236) chaf1a (ENSLCAG00010002234) ubxn6 (ENSLCAG00010002232) uap1 (ENSLCAG00010002220) ##22 Anabantaria ANCESTRAL SPECIES 7 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000170739 ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 ENSGT00740000116213 Zig-zag eel MODERN SPECIES 18 tjp3 (ENSMAMG00000018725) ENSMAMG00000018688 ENSMAMG00000018703 ENSMAMG00000018612 ENSMAMG00000027280 ENSMAMG00000018576 ENSMAMG00000018556 ENSMAMG00000018541 ENSMAMG00000018533 ENSMAMG00000027773 ENSMAMG00000018455 si:ch211-129c21.1 (ENSMAMG00000018435) scamp4 (ENSMAMG00000025900) chaf1a (ENSMAMG00000018408) ubxn6 (ENSMAMG00000018397) uap1 (ENSMAMG00000018365) ##22 ENSMAMG00000018316 hsd17b7 (ENSMAMG00000018239) serbp1a (ENSMAMG00000018229) il12rb2 (ENSMAMG00000018218) il23r (ENSMAMG00000018157) ENSMAMG00000018106 ENSMAMG00000024287 cyp2ad2 (ENSMAMG00000017916) cyp2n13 (ENSMAMG00000017517) cyp2n13 (ENSMAMG00000017505) hook1 (ENSMAMG00000017421) ENSMAMG00000017410 pfas (ENSMAMG00000017333) ENSMAMG00000017290 ENSMAMG00000017282 Anabantoidei ANCESTRAL SPECIES 6 ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b.g.a ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.a.a.b.a ENSGT00950000182879.a.b.b.a.a.b.a.a ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.a.g.a ENSGT00940000159251 ENSGT00390000017123.a ENSGT00390000007600 ENSGT00530000063347.A.b ENSGT01070000253866 Climbing perch MODERN SPECIES 17 tjp3 (ENSATEG00000023807) ENSATEG00000023771 ENSATEG00000023760 ENSATEG00000023754 ENSATEG00000026865 ENSATEG00000023737 ENSATEG00000026681 ENSATEG00000029113 ENSATEG00000023725 ENSATEG00000023717 ENSATEG00000023710 si:ch211-129c21.1 (ENSATEG00000023698) scamp4 (ENSATEG00000026734) chaf1a (ENSATEG00000023683) ubxn6 (ENSATEG00000023678) uap1 (ENSATEG00000023663) ##22 ENSATEG00000023653 hsd17b7 (ENSATEG00000023642) serbp1a (ENSATEG00000023637) il12rb2 (ENSATEG00000023631) il23r (ENSATEG00000023627) ENSATEG00000025483 ENSATEG00000023563 ENSATEG00000029722 ENSATEG00000027477 ENSATEG00000025943 ENSATEG00000028222 ENSATEG00000029478 ENSATEG00000026906 ENSATEG00000026125 ENSATEG00000027146 Siamese fighting fish MODERN SPECIES 15 ralgps2 (ENSBSLG00000010870) fam20b (ENSBSLG00000010809) faslg (ENSBSLG00000010777) si:dkey-86e18.1 (ENSBSLG00000010735) ENSBSLG00000010717 ENSBSLG00000010693 ENSBSLG00000010618 jun (ENSBSLG00000010589) prdx6 (ENSBSLG00000010569) plpp6 (ENSBSLG00000010567) ENSBSLG00000010370 si:dkey-239i20.4 (ENSBSLG00000010357) ENSBSLG00000010355 ENSBSLG00000010345 ENSBSLG00000010265 uap1 (ENSBSLG00000009778) ##22 DDR2 (ENSBSLG00000009369) serbp1a (ENSBSLG00000009337) il12rb2 (ENSBSLG00000009299) ENSBSLG00000009271 ENSBSLG00000009181 ENSBSLG00000008982 ENSBSLG00000008924 ENSBSLG00000008296 ENSBSLG00000002932 ENSBSLG00000002883 ENSBSLG00000002861 ENSBSLG00000002853 ENSBSLG00000002688 ENSBSLG00000002531 ENSBSLG00000002330 Protacanthopterygii ANCESTRAL SPECIES 34 ENSGT00940000155195 ENSGT00940000157937.b ENSGT00940000158520.e.b ENSGT00940000157316.f ENSGT00940000157316.e.b ENSGT00940000156099 ENSGT00940000165058.a ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000157380 ENSGT00940000159036 ENSGT00510000046975.b ENSGT00940000164616 ENSGT00940000157769 ENSGT00940000153464.A.b ##22 ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00730000111014.o.b ENSGT00530000063751.a.a ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 60 ENSGT00940000155195.h ENSGT00940000157937.b.a ENSGT00940000158520.e.b.b ENSGT00940000157316.f ENSGT00940000158520.f ENSGT00940000157316.e.b.a ENSGT00940000156099.f ENSGT00940000165058.a.g ENSGT00940000154304.C.b ENSGT00940000164081.b.f ENSGT00940000157380.c.b ENSGT00940000159036.f ENSGT00510000046975.b.k ENSGT00940000164616 ENSGT00940000157769.p ENSGT00940000153464.A.b.q ##22 ENSGT00940000154842.a.b.e.e ENSGT00390000013340.d ENSGT00520000055591.a.a.c ENSGT00730000111014.o.b.f ENSGT00530000063751.a.a.f ENSGT00940000157990.a.b.a ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00940000164461 ENSGT00390000003428.f ENSGT00670000099343.a ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c Salmoninae_a ANCESTRAL SPECIES 46 ENSGT00940000155195.h ENSGT00940000157937.b.a ENSGT00940000158520.e.b.b ENSGT00940000157316.f ENSGT00940000157316.e.b.a ENSGT00940000156099.f ENSGT00940000165058.a.g ENSGT00990000209517 ENSGT00940000154304.C.b ENSGT00940000164081.b.f ENSGT00940000157380.c.b ENSGT00940000159036.f ENSGT00510000046975.b.k ENSGT00940000164616 ENSGT00940000157769.p ENSGT00940000153464.A.b.q ##22 ENSGT00940000154842.a.b.e.e ENSGT00390000013340.d ENSGT00520000055591.a.a.c ENSGT00730000111014.o.b.f ENSGT00530000063751.a.a.f ENSGT00940000157990.a.b.a ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00940000164461 ENSGT00390000003428.f ENSGT00670000099343.a ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155195.h ENSGT00940000157937.b.a ENSGT00940000158520.e.b.b ENSGT00940000157316.f ENSGT00940000157316.e.b.a ENSGT00940000156099.f ENSGT00940000165058.a.g ENSGT00990000209517 ENSGT00940000154304.C.b ENSGT00940000164081.b.f ENSGT00940000157380.c.b ENSGT00940000159036.f ENSGT00510000046975.b.k ENSGT00940000164616 ENSGT00940000157769.p ENSGT00940000153464.A.b.q ##22 ENSGT00940000154842.a.b.e.e ENSGT00390000013340.d ENSGT00520000055591.a.a.c ENSGT00730000111014.o.b.f ENSGT00530000063751.a.a.f ENSGT00940000157990.a.b.a ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00940000164461.lb ENSGT00390000003428.f ENSGT00670000099343.a ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000159250.n ENSGT00940000155195.h ENSGT00940000157937.b.a ENSGT00940000158520.e.b.b ENSGT00940000157316.f ENSGT00940000157316.e.b.a ENSGT00940000156099.f ENSGT00940000165058.a.g ENSGT00990000209517 ENSGT00940000154304.C.b ENSGT00940000164081.b.f ENSGT00940000157380.c.b ENSGT00940000159036.f ENSGT00510000046975.b.k ENSGT00940000157769.p ENSGT00940000153464.A.b.q ##22 ENSGT00940000154842.a.b.e.e ENSGT00390000013340.d ENSGT00520000055591.a.a.c ENSGT00730000111014.o.b.f ENSGT00530000063751.a.a.f ENSGT00940000157990.a.b.a ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00390000003428.f ENSGT00670000099343.a ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c ENSGT00940000165649.e Chinook salmon MODERN SPECIES LRRC8C (ENSOTSG00005033797) uchl5 (ENSOTSG00005033785) ENSOTSG00005033770 RGS13 (ENSOTSG00005033765) ENSOTSG00005033763 RGS1 (ENSOTSG00005033759) brinp3a.2 (ENSOTSG00005033758) brinp3a.1 (ENSOTSG00005033757) ENSOTSG00005033756 rgs8 (ENSOTSG00005033755) rgs16 (ENSOTSG00005033704) rgs5a (ENSOTSG00005033703) rgs4 (ENSOTSG00005033700) ENSOTSG00005033697 uhmk1 (ENSOTSG00005033694) uap1 (ENSOTSG00005033180) ##22 DDR2 (ENSOTSG00005033127) ENSOTSG00005033115 serbp1a (ENSOTSG00005033084) tprb (ENSOTSG00005032894) ENSOTSG00005032861 ENSOTSG00005032858 nrl (ENSOTSG00005032855) ENSOTSG00005032851 paics (ENSOTSG00005031944) ppat (ENSOTSG00005031930) ENSOTSG00005031928 AASDH (ENSOTSG00005031923) cracd (ENSOTSG00005031922) chst14 (ENSOTSG00005031918) cep135 (ENSOTSG00005031907) Coho salmon MODERN SPECIES 1 uchl5 (ENSOKIG00005020077) ENSOKIG00005020029 ENSOKIG00005020015 RGS13 (ENSOKIG00005020006) RGS1 (ENSOKIG00005020001) ENSOKIG00005019994 brinp3a.2 (ENSOKIG00005019983) brinp3a.1 (ENSOKIG00005019954) rgs8 (ENSOKIG00005019948) rgs16 (ENSOKIG00005019935) rgs5a (ENSOKIG00005019924) rgs4 (ENSOKIG00005019913) ENSOKIG00005019904 ENSOKIG00005019871 uhmk1 (ENSOKIG00005019819) uap1 (ENSOKIG00005019658) ##22 DDR2 (ENSOKIG00005019403) ENSOKIG00005019357 serbp1a (ENSOKIG00005019333) ENSOKIG00005019318 tprb (ENSOKIG00005019019) ENSOKIG00005018960 ENSOKIG00005018894 nrl (ENSOKIG00005018887) ENSOKIG00005018867 paics (ENSOKIG00005018350) ppat (ENSOKIG00005018219) AASDH (ENSOKIG00005018135) cracd (ENSOKIG00005018108) chst14 (ENSOKIG00005018099) cep135 (ENSOKIG00005018058) Rainbow trout MODERN SPECIES 22 uchl5 (ENSOMYG00000014643) ENSOMYG00000014709 RGS13 (ENSOMYG00000077225) ENSOMYG00000014683 RGS1 (ENSOMYG00000014620) brinp3a.2 (ENSOMYG00000014608) brinp3a.1 (ENSOMYG00000014578) rgs8 (ENSOMYG00000014555) rgs16 (ENSOMYG00000056056) rgs5a (ENSOMYG00000014532) rgs4 (ENSOMYG00000052330) ENSOMYG00000063811 ENSOMYG00000050321 ENSOMYG00000056159 uhmk1 (ENSOMYG00000014497) uap1 (ENSOMYG00000014055) ##22 ENSOMYG00000013833 ENSOMYG00000070155 serbp1a (ENSOMYG00000013784) ENSOMYG00000011658 ENSOMYG00000011441 ENSOMYG00000011310 ENSOMYG00000011288 ENSOMYG00000068922 paics (ENSOMYG00000011122) ENSOMYG00000048628 ppat (ENSOMYG00000011044) AASDH (ENSOMYG00000010991) cracd (ENSOMYG00000010956) ENSOMYG00000050697 ENSOMYG00000010912 Salmo ANCESTRAL SPECIES 20 ENSGT00940000159250.n ENSGT00940000155195.h ENSGT00940000157937.b.a ENSGT00940000158520.e.b.b ENSGT00940000157316.f ENSGT00940000157316.e.b.a ENSGT00940000156099.f ENSGT00940000165058.a.g ENSGT00990000209517 ENSGT00940000154304.C.b ENSGT00940000164081.b.f ENSGT00940000157380.c.b ENSGT00940000159036.f ENSGT00510000046975.b.k ENSGT00940000157769.p ENSGT00940000153464.A.b.q ##22 ENSGT00940000154842.a.b.e.e ENSGT00390000013340.d ENSGT00520000055591.a.a.c ENSGT00730000111014.o.b.f ENSGT00530000063751.a.a.f ENSGT00940000157990.a.b.a ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00390000003428.f ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c ENSGT00940000165649.e ENSGT00940000158640.i Atlantic salmon MODERN SPECIES 15 ENSSSAG00000010199 RGS1 (ENSSSAG00000010206) brinp3a.2 (ENSSSAG00000010211) brinp3a.1 (ENSSSAG00000010229) ENSSSAG00000099957 ENSSSAG00000010238 rgs8 (ENSSSAG00000084763) rgs16 (ENSSSAG00000010258) rgs5a (ENSSSAG00000010277) rgs4 (ENSSSAG00000092662) ENSSSAG00000092001 ENSSSAG00000096231 uhmk1 (ENSSSAG00000110248) ENSSSAG00000100008 ENSSSAG00000106233 uap1 (ENSSSAG00000010526) ##22 ENSSSAG00000015802 hsd17b7 (ENSSSAG00000031963) serbp1a (ENSSSAG00000032139) ENSSSAG00000033233 ENSSSAG00000040343 ENSSSAG00000040388 ENSSSAG00000040731 ENSSSAG00000040748 paics (ENSSSAG00000040893) ppat (ENSSSAG00000042182) ENSSSAG00000121485 ENSSSAG00000083847 AASDH (ENSSSAG00000042247) cracd (ENSSSAG00000042849) ENSSSAG00000042869 River trout MODERN SPECIES 33 brinp3a.1 (ENSSTUG00000012724) ENSSTUG00000012732 rgs8 (ENSSTUG00000012736) rgs16 (ENSSTUG00000012756) rgs5a (ENSSTUG00000012775) rgs4 (ENSSTUG00000012793) ENSSTUG00000012803 ENSSTUG00000012851 ENSSTUG00000012863 ENSSTUG00000012875 ENSSTUG00000012881 ENSSTUG00000012906 ENSSTUG00000012924 ENSSTUG00000012930 uhmk1 (ENSSTUG00000012961) uap1 (ENSSTUG00000012994) ##22 ENSSTUG00000013232 ENSSTUG00000013242 DDR2 (ENSSTUG00000013276) hsd17b7 (ENSSTUG00000000180) serbp1a (ENSSTUG00000000202) tprb (ENSSTUG00000000269) ENSSTUG00000000411 ENSSTUG00000000448 nrl (ENSSTUG00000000474) ENSSTUG00000000485 paics (ENSSTUG00000000523) ppat (ENSSTUG00000000699) AASDH (ENSSTUG00000000719) cracd (ENSSTUG00000000803) chst14 (ENSSTUG00000000810) Huchen MODERN SPECIES 439 ENSHHUG00000030491 ENSHHUG00000030501 ENSHHUG00000030506 uhmk1 (ENSHHUG00000030515) uap1 (ENSHHUG00000030537) ##22 DDR2 (ENSHHUG00000030633) hsd17b7 (ENSHHUG00000030667) serbp1a (ENSHHUG00000030681) tprb (ENSHHUG00000030688) ENSHHUG00000030718 ENSHHUG00000030726 nrl (ENSHHUG00000030760) ENSHHUG00000030767 paics (ENSHHUG00000030770) ppat (ENSHHUG00000030784) ENSHHUG00000030963 ENSHHUG00000030971 AASDH (ENSHHUG00000030984) cracd (ENSHHUG00000031026) chst14 (ENSHHUG00000031050) Salmoninae ANCESTRAL SPECIES 15 ENSGT00940000159250.m ENSGT00940000164211 ENSGT00940000155195.g ENSGT00940000157937.b.b ENSGT00940000158520.e.b.a ENSGT00940000157316.e.b.b ENSGT00940000156099.e ENSGT00940000165058.a.h ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C.a ENSGT00940000164081.b.e ENSGT00940000157380.c.a ENSGT00940000159036.e ENSGT00510000046975.b.j ENSGT00940000157769.o ENSGT00940000153464.A.b.r ##22 ENSGT00940000154842.a.b.e.f ENSGT00520000055591.a.a.d ENSGT00730000111014.o.b.e ENSGT00530000063751.a.a.e ENSGT00940000157990.a.b.b ENSGT00940000166379.a ENSGT00940000160062.b.c ENSGT00390000010172.ub ENSGT00390000003428.e ENSGT00670000099343.b ENSGT00940000161471.h ENSGT00940000162640.d ENSGT00940000158640.j ENSGT00510000048726.b ENSGT00940000157580.a.a.c Salmoninae_a ANCESTRAL SPECIES 9 ENSGT00940000159250.m ENSGT00940000164211 ENSGT00940000155195.g ENSGT00940000157937.b.b ENSGT00940000158520.e.b.a ENSGT00940000157316.e.b.b ENSGT00940000156099.e ENSGT00940000165058.a.h ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C.a ENSGT00940000164081.b.e ENSGT00940000157380.c.a ENSGT00940000159036.e ENSGT00510000046975.b.j ENSGT00940000157769.o ENSGT00940000153464.A.b.r ##22 ENSGT00940000154842.a.b.e.f ENSGT00520000055591.a.a.d ENSGT00730000111014.o.b.e ENSGT00530000063751.a.a.e ENSGT00940000157990.a.b.b ENSGT00940000166379.a ENSGT00940000160062.b.c ENSGT00390000010172.ub ENSGT00390000003428.e ENSGT00670000099343.b ENSGT00940000161471.h ENSGT00940000162640.d ENSGT00940000158640.j ENSGT00510000048726.b ENSGT00940000157580.a.a.c Salmo ANCESTRAL SPECIES 14 ENSGT00940000159250.m.c ENSGT00940000164211 ENSGT00940000155195.g ENSGT00940000157937.b.b ENSGT00940000158520.e.b.a ENSGT00940000157316.e.b.b ENSGT00940000156099.e ENSGT00940000165058.a.h ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C.a ENSGT00940000164081.b.e ENSGT00940000157380.c.a ENSGT00940000159036.e ENSGT00510000046975.b.j ENSGT00940000157769.o ENSGT00940000153464.A.b.r ##22 ENSGT00940000154842.a.b.e.f ENSGT00520000055591.a.a.d ENSGT00730000111014.o.b.e ENSGT00530000063751.a.a.e ENSGT00940000157990.a.b.b ENSGT00940000166379.a ENSGT00940000160062.b.c ENSGT00390000010172.ub ENSGT00390000003428.e ENSGT00670000099343.b ENSGT00940000161471.h ENSGT00940000162640.d ENSGT00940000158640.j ENSGT00940000176973.a ENSGT00510000048726.b River trout MODERN SPECIES 14 LRRC8C (ENSSTUG00000002738) glrx2 (ENSSTUG00000002604) uchl5 (ENSSTUG00000002644) ENSSTUG00000002593 RGS13 (ENSSTUG00000002578) RGS1 (ENSSTUG00000002569) brinp3a.2 (ENSSTUG00000002555) brinp3a.1 (ENSSTUG00000002525) ENSSTUG00000002512 rgs8 (ENSSTUG00000002507) rgs16 (ENSSTUG00000002495) rgs5a (ENSSTUG00000002489) rgs4 (ENSSTUG00000002484) ENSSTUG00000016489 uhmk1 (ENSSTUG00000016471) uap1 (ENSSTUG00000015973) ##22 DDR2 (ENSSTUG00000015773) serbp1a (ENSSTUG00000015725) tprb (ENSSTUG00000013032) prg4b (ENSSTUG00000012812) ENSSTUG00000012632 nrl (ENSSTUG00000012618) REM2 (ENSSTUG00000012581) paics (ENSSTUG00000012102) ppat (ENSSTUG00000011964) ENSSTUG00000011949 cracd (ENSSTUG00000011852) chst14 (ENSSTUG00000011845) exoc1 (ENSSTUG00000011507) ENSSTUG00000011460 clocka (ENSSTUG00000010504) Atlantic salmon MODERN SPECIES 1 LRRC8C (ENSSSAG00000030668) glrx2 (ENSSSAG00000030560) uchl5 (ENSSSAG00000028321) RGS2 (ENSSSAG00000027956) RGS13 (ENSSSAG00000027762) RGS1 (ENSSSAG00000027609) brinp3a.2 (ENSSSAG00000025797) brinp3a.1 (ENSSSAG00000024431) ENSSSAG00000024249 rgs8 (ENSSSAG00000115928) rgs16 (ENSSSAG00000023910) RGS5 (ENSSSAG00000023533) rgs4 (ENSSSAG00000088625) ENSSSAG00000023006 uhmk1 (ENSSSAG00000109815) uap1 (ENSSSAG00000019712) ##22 ENSSSAG00000017684 serbp1a (ENSSSAG00000017429) ENSSSAG00000015852 ENSSSAG00000116736 ENSSSAG00000015744 ENSSSAG00000015526 ENSSSAG00000015485 ENSSSAG00000015445 paics (ENSSSAG00000010758) PPAT (ENSSSAG00000010520) ENSSSAG00000010452 cracd (ENSSSAG00000010269) ENSSSAG00000111516 ENSSSAG00000010241 EXOC1 (ENSSSAG00000006392) Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00940000159250.m ENSGT00940000164211 ENSGT00940000155195.g ENSGT00940000157937.b.b ENSGT00940000158520.e.b.a ENSGT00940000157316.e.b.b ENSGT00940000156099.e ENSGT00940000165058.a.h ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C.a ENSGT00940000164081.b.e ENSGT00940000157380.c.a ENSGT00940000159036.e ENSGT00510000046975.b.j ENSGT00940000157769.o ENSGT00940000153464.A.b.r ##22 ENSGT00940000154842.a.b.e.f ENSGT00520000055591.a.a.d ENSGT00730000111014.o.b.e ENSGT00530000063751.a.a.e ENSGT00940000157990.a.b.b.b ENSGT00940000166379.a ENSGT00940000160062.b.c ENSGT00390000010172.ub ENSGT00940000164461.kb ENSGT00390000003428.e ENSGT00670000099343.b ENSGT00940000161471.h ENSGT00940000162640.d ENSGT00940000158640.j ENSGT00510000048726.b Rainbow trout MODERN SPECIES 26 ENSOMYG00000067217 RGS1 (ENSOMYG00000012525) brinp3a.2 (ENSOMYG00000012456) ENSOMYG00000054136 ENSOMYG00000076135 brinp3a.1 (ENSOMYG00000012431) ENSOMYG00000012344 rgs8 (ENSOMYG00000012326) rgs16 (ENSOMYG00000012320) rgs5a (ENSOMYG00000012308) ENSOMYG00000068573 rgs4 (ENSOMYG00000066730) ENSOMYG00000012286 ENSOMYG00000053007 uhmk1 (ENSOMYG00000012261) uap1 (ENSOMYG00000012062) ##22 ENSOMYG00000011961 serbp1a (ENSOMYG00000011907) ENSOMYG00000009177 ENSOMYG00000008368 ENSOMYG00000008281 ENSOMYG00000008147 ENSOMYG00000008093 paics (ENSOMYG00000008066) ENSOMYG00000008056 PPAT (ENSOMYG00000007988) cracd (ENSOMYG00000059164) ENSOMYG00000067055 ENSOMYG00000007923 EXOC1 (ENSOMYG00000007846) nmu (ENSOMYG00000007518) Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00940000159250.m ENSGT00940000164211 ENSGT00940000155195.g ENSGT00940000157937.b.b ENSGT00940000158520.e.b.a ENSGT00940000157316.e.b.b ENSGT00940000156099.e ENSGT00940000165058.a.h ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C.a ENSGT00940000164081.b.e ENSGT00940000157380.c.a ENSGT00940000159036.e ENSGT00510000046975.b.j ENSGT00940000157769.o ENSGT00940000153464.A.b.r ##22 ENSGT00940000154842.a.b.e.f ENSGT00520000055591.a.a.d ENSGT00730000111014.o.b.e ENSGT00530000063751.a.a.e ENSGT00940000157990.a.b.b.a ENSGT00940000166379.a ENSGT00940000160062.b.c ENSGT00390000010172.ub ENSGT00390000003428.e ENSGT00670000099343.b ENSGT00940000161471.h ENSGT00940000162640.d ENSGT00940000158640.j ENSGT00510000048726.b ENSGT00940000157580.a.a.c Coho salmon MODERN SPECIES 4 uchl5 (ENSOKIG00005047517) ENSOKIG00005047575 RGS13 (ENSOKIG00005047580) ENSOKIG00005047585 RGS1 (ENSOKIG00005047597) ENSOKIG00005047610 brinp3a.2 (ENSOKIG00005047620) brinp3a.1 (ENSOKIG00005047647) ENSOKIG00005047657 rgs8 (ENSOKIG00005047692) rgs16 (ENSOKIG00005047697) rgs5a (ENSOKIG00005047708) rgs4 (ENSOKIG00005047735) ENSOKIG00005047740 uhmk1 (ENSOKIG00005047753) uap1 (ENSOKIG00005047773) ##22 DDR2 (ENSOKIG00005047831) serbp1a (ENSOKIG00005047907) TPR (ENSOKIG00005047953) ENSOKIG00005048113 ENSOKIG00005048141 ENSOKIG00005048179 REM2 (ENSOKIG00005048181) paics (ENSOKIG00005048197) PPAT (ENSOKIG00005048311) ENSOKIG00005048318 cracd (ENSOKIG00005048331) CHST14 (ENSOKIG00005048334) EXOC1 (ENSOKIG00005048357) nmu (ENSOKIG00005048902) CLOCK (ENSOKIG00005048996) Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 29 glrx2 (ENSOTSG00005034135) uchl5 (ENSOTSG00005034108) ENSOTSG00005034106 RGS13 (ENSOTSG00005034105) RGS1 (ENSOTSG00005034102) brinp3a.2 (ENSOTSG00005034100) pno1 (ENSOTSG00005034097) brinp3a.1 (ENSOTSG00005034095) ENSOTSG00005034009 rgs8 (ENSOTSG00005034008) rgs16 (ENSOTSG00005034007) rgs5a (ENSOTSG00005034006) rgs4 (ENSOTSG00005034005) ENSOTSG00005034004 uhmk1 (ENSOTSG00005034003) uap1 (ENSOTSG00005033978) ##22 DDR2 (ENSOTSG00005033973) serbp1a (ENSOTSG00005033970) tprb (ENSOTSG00005033935) ENSOTSG00005033933 ENSOTSG00005033930 nrl (ENSOTSG00005033929) ENSOTSG00005033927 ENSOTSG00005033924 paics (ENSOTSG00005033333) ppat (ENSOTSG00005033328) ENSOTSG00005033326 cracd (ENSOTSG00005033325) exoc1 (ENSOTSG00005032522) nmu (ENSOTSG00005032521) clocka (ENSOTSG00005030978) Chinook salmon MODERN SPECIES 29 glrx2 (ENSOTSG00005021788) uchl5 (ENSOTSG00005021766) ENSOTSG00005021765 RGS13 (ENSOTSG00005021764) RGS1 (ENSOTSG00005021763) brinp3a.2 (ENSOTSG00005021744) pno1 (ENSOTSG00005021741) brinp3a.1 (ENSOTSG00005021740) ENSOTSG00005021636 rgs8 (ENSOTSG00005021633) rgs16 (ENSOTSG00005021631) rgs5a (ENSOTSG00005021628) rgs4 (ENSOTSG00005021626) ENSOTSG00005021624 uhmk1 (ENSOTSG00005021623) uap1 (ENSOTSG00005021609) ##22 DDR2 (ENSOTSG00005021605) serbp1a (ENSOTSG00005021601) tprb (ENSOTSG00005021597) ENSOTSG00005021592 ENSOTSG00005021581 nrl (ENSOTSG00005021568) ENSOTSG00005021561 ENSOTSG00005021557 paics (ENSOTSG00005020458) ppat (ENSOTSG00005020453) ENSOTSG00005020452 cracd (ENSOTSG00005020450) exoc1 (ENSOTSG00005020314) nmu (ENSOTSG00005020306) clocka (ENSOTSG00005019295) Huchen MODERN SPECIES 442 uap1 (ENSHHUG00000036552) ##22 DDR2 (ENSHHUG00000036535) serbp1a (ENSHHUG00000036510) ENSHHUG00000036505 tprb (ENSHHUG00000036290) ENSHHUG00000036278 ENSHHUG00000036236 nrl (ENSHHUG00000036227) REM2 (ENSHHUG00000036206) paics (ENSHHUG00000036126) ppat (ENSHHUG00000035999) ENSHHUG00000035978 ENSHHUG00000035974 cracd (ENSHHUG00000035961) ENSHHUG00000035955 exoc1 (ENSHHUG00000035825) Northern pike MODERN SPECIES 7 uchl5 (ENSELUG00000003300) ENSELUG00000003314 RGS13 (ENSELUG00000031770) ENSELUG00000003335 RGS1 (ENSELUG00000003351) brinp3a.2 (ENSELUG00000000111) brinp3a.1 (ENSELUG00000003393) ENSELUG00000003442 rgs8 (ENSELUG00000030393) rgs16 (ENSELUG00000003499) RGS5 (ENSELUG00000026705) ENSELUG00000026954 rgs4 (ENSELUG00000003529) NOS1AP (ENSELUG00000003580) uhmk1 (ENSELUG00000003613) uap1 (ENSELUG00000003648) ##22 DDR2 (ENSELUG00000003697) serbp1a (ENSELUG00000003727) tprb (ENSELUG00000003778) ENSELUG00000003806 ENSELUG00000003870 nrl (ENSELUG00000003877) ENSELUG00000003891 paics (ENSELUG00000003937) ppat (ENSELUG00000003992) ENSELUG00000004031 AASDH (ENSELUG00000004068) cracd (ENSELUG00000004112) chst14 (ENSELUG00000028149) cep135 (ENSELUG00000004169) exoc1 (ENSELUG00000004265) Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 5 ENSGT00940000156725.a ENSGT00940000158821.j ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00560000077332 ENSGT00940000154967.b.b.a ENSGT00940000156099 ENSGT00940000165058.a ENSGT00950000183022.a.a.b.b ENSGT00940000154304.C ENSGT00940000164081.b ENSGT00940000159036.a ENSGT00510000046975.b ENSGT00940000157769 ENSGT00940000153464.A.b.s ##22 ENSGT00940000154842.a.b.e ENSGT00520000055591.a.a ENSGT00940000159829.c.a ENSGT00940000159829.d ENSGT01030000234573.A.b.a.b ENSGT00940000156209 ENSGT00940000174981.a ENSGT00940000156301.a.a ENSGT00390000006503.a ENSGT00940000158755.a ENSGT00940000154568 ENSGT00940000157092.q ENSGT00940000158648.c ENSGT00940000157568.c ENSGT00940000153947.B.a Asian bonytongue MODERN SPECIES 24 ENSSFOG00015002822 ENSSFOG00015002688 ENSSFOG00015002740 ENSSFOG00015002676 glrx2 (ENSSFOG00015002662) uchl5 (ENSSFOG00015002628) brinp3a.2 (ENSSFOG00015002598) brinp3a.1 (ENSSFOG00015002567) ENSSFOG00015002452 rgs8 (ENSSFOG00015002422) rgs16 (ENSSFOG00015002203) rgs5a (ENSSFOG00015025961) rgs4 (ENSSFOG00015002140) ENSSFOG00015002068 uhmk1 (ENSSFOG00015002013) uap1 (ENSSFOG00015001952) ##22 DDR2 (ENSSFOG00015001943) serbp1a (ENSSFOG00015001870) ENSSFOG00015001797 ENSSFOG00015001776 MIER1 (ENSSFOG00015001746) dnai4 (ENSSFOG00015001726) ENSSFOG00015001713 SGIP1 (ENSSFOG00015031180) PDE4B (ENSSFOG00015001634) ENSSFOG00015030854 lepr (ENSSFOG00015001625) DNAJC6 (ENSSFOG00015001526) AK3 (ENSSFOG00015001475) jak1 (ENSSFOG00015001377) RAVER2 (ENSSFOG00015001335) P. kingsleyae MODERN SPECIES 5 DENND1B (ENSPKIG00000016049) crb1 (ENSPKIG00000015952) aspm (ENSPKIG00000015833) ENSPKIG00000015778 GLRX2 (ENSPKIG00000015759) brinp3a.2 (ENSPKIG00000015726) brinp3a.1 (ENSPKIG00000015702) ENSPKIG00000015659 rgs8 (ENSPKIG00000015620) rgs16 (ENSPKIG00000015525) rgs5a (ENSPKIG00000015499) ENSPKIG00000015477 rgs4 (ENSPKIG00000015451) ENSPKIG00000015372 uhmk1 (ENSPKIG00000015328) uap1 (ENSPKIG00000015291) ##22 DDR2 (ENSPKIG00000015188) serbp1a (ENSPKIG00000015108) ENSPKIG00000015066 ENSPKIG00000015010 MIER1 (ENSPKIG00000014969) dnai4 (ENSPKIG00000014864) ENSPKIG00000014840 SGIP1 (ENSPKIG00000014494) PDE4B (ENSPKIG00000014217) LEPROT (ENSPKIG00000014148) DNAJC6 (ENSPKIG00000014063) ak4 (ENSPKIG00000014010) jak1 (ENSPKIG00000013954) RAVER2 (ENSPKIG00000013925) ENSPKIG00000013908 Osteoglossiformes ANCESTRAL SPECIES 51 ENSGT00940000155152.f.a ENSGT00550000075080 ENSGT00940000158746 ENSGT00940000155117.f.a ENSGT00390000001114 ENSGT00390000006200 ENSGT00940000155195 ENSGT00940000157937.b ENSGT00940000158520.e.a ENSGT00940000157316 ENSGT00940000166298 ENSGT00940000165058.b ENSGT00940000164081.a ENSGT00940000157380 ENSGT00940000159036.b ENSGT00940000153464.A.b.t ##22 ENSGT00940000154842.a.b.f ENSGT00390000013340 ENSGT00520000055591.a.b ENSGT00940000159829.c.b ENSGT00940000155665.a ENSGT01030000234573.A.b.a.a ENSGT00940000154396.b.b ENSGT00940000160185 ENSGT00940000156301.a.b ENSGT00940000155190 ENSGT00730000111209.k ENSGT00940000158755.b ENSGT00940000157092.r ENSGT00940000158648.d ENSGT00940000157568.d Asian bonytongue MODERN SPECIES 18 ENSSFOG00015031503 ENSSFOG00015030344 KCNT2 (ENSSFOG00015011805) b3galt2 (ENSSFOG00015031272) cdc73 (ENSSFOG00015011900) ro60 (ENSSFOG00015011990) rgs2 (ENSSFOG00015030714) rgs13 (ENSSFOG00015012027) RGS1 (ENSSFOG00015012047) rgs18 (ENSSFOG00015012080) ENSSFOG00015012096 rgs5b (ENSSFOG00015012140) rgs5a (ENSSFOG00015025128) rgs4 (ENSSFOG00015012181) ENSSFOG00015012194 UAP1 (ENSSFOG00015012249) ##22 DDR2 (ENSSFOG00015012278) hsd17b7 (ENSSFOG00015012348) SERBP1 (ENSSFOG00015026486) ENSSFOG00015012402 slc35d1a (ENSSFOG00015012432) mier1a (ENSSFOG00015012453) insl5b (ENSSFOG00015012465) dynlt5 (ENSSFOG00015012485) SGIP1 (ENSSFOG00015012521) PDE4B (ENSSFOG00015012694) LEPR (ENSSFOG00015012782) ENSSFOG00015012808 LEPROT (ENSSFOG00015025521) DNAJC6 (ENSSFOG00015012857) jak1 (ENSSFOG00015012910) P. kingsleyae MODERN SPECIES 81 ENSPKIG00000018060 ZBTB41 (ENSPKIG00000018092) cdc73 (ENSPKIG00000018155) b3galt2 (ENSPKIG00000018205) ro60 (ENSPKIG00000018217) uchl5 (ENSPKIG00000018255) rgs2 (ENSPKIG00000018309) rgs13 (ENSPKIG00000018325) RGS1 (ENSPKIG00000018348) rgs18 (ENSPKIG00000018364) ENSPKIG00000018382 rgs5b (ENSPKIG00000018406) RGS5 (ENSPKIG00000018423) rgs4 (ENSPKIG00000018438) ENSPKIG00000018473 UAP1 (ENSPKIG00000018534) ##22 DDR2 (ENSPKIG00000018612) mier1a (ENSPKIG00000018689) slc35d1a (ENSPKIG00000018736) ENSPKIG00000018793 SERBP1 (ENSPKIG00000018832) hsd17b7 (ENSPKIG00000018855) ENSPKIG00000018889 dynlt5 (ENSPKIG00000018906) SGIP1 (ENSPKIG00000018931) PDE4B (ENSPKIG00000019035) lepr (ENSPKIG00000019200) DNAJC6 (ENSPKIG00000019236) jak1 (ENSPKIG00000019281) RAVER2 (ENSPKIG00000019357) CACHD1 (ENSPKIG00000019410) Spotted gar MODERN SPECIES 648 ro60 (ENSLOCG00000007384) uchl5 (ENSLOCG00000007370) ENSLOCG00000007350 rgs13 (ENSLOCG00000007328) RGS1 (ENSLOCG00000007316) rgs18 (ENSLOCG00000007296) brinp3a.2 (ENSLOCG00000007286) brinp3a.1 (ENSLOCG00000007272) ENSLOCG00000007261 rgs5b (ENSLOCG00000007246) rgs5a (ENSLOCG00000007218) rgs4 (ENSLOCG00000007206) H4C7 (ENSLOCG00000017741) ENSLOCG00000007192 uhmk1 (ENSLOCG00000007180) uap1 (ENSLOCG00000007170) ##22 DDR2 (ENSLOCG00000007142) hsd17b7 (ENSLOCG00000007122) serbp1a (ENSLOCG00000007107) ENSLOCG00000007083 ENSLOCG00000007069 slc35d1b (ENSLOCG00000007054) mier1a (ENSLOCG00000007038) dnai4 (ENSLOCG00000007005) insl5a (ENSLOCG00000006990) dynlt5 (ENSLOCG00000006973) SGIP1 (ENSLOCG00000006955) PDE4B (ENSLOCG00000006922) lepr (ENSLOCG00000006903) LEPROT (ENSLOCG00000006886) DNAJC6 (ENSLOCG00000006853) Reedfish MODERN SPECIES 1 rgs18 (ENSECRG00000011654) brinp3a.2 (ENSECRG00000011652) ENSECRG00000011647 brinp3a.1 (ENSECRG00000011623) ENSECRG00000011611 ENSECRG00000011588 rgs8 (ENSECRG00000011563) rgs16 (ENSECRG00000011546) rgs5a (ENSECRG00000011534) rgs4 (ENSECRG00000011519) rpl27 (ENSECRG00000011509) ENSECRG00000011494 ENSECRG00000011482 ENSECRG00000011471 uhmk1 (ENSECRG00000011461) uap1 (ENSECRG00000011438) ##22 ENSECRG00000011414 hsd17b7 (ENSECRG00000011393) serbp1a (ENSECRG00000011358) IL12RB2 (ENSECRG00000011310) slc35d1b (ENSECRG00000009488) mier1b (ENSECRG00000009470) dnai4 (ENSECRG00000009439) insl5a (ENSECRG00000009426) dynlt5 (ENSECRG00000009416) SGIP1 (ENSECRG00000009386) PDE4B (ENSECRG00000009352) lepr (ENSECRG00000009304) LEPROT (ENSECRG00000009275) DNAJC6 (ENSECRG00000009249) ak4 (ENSECRG00000009230) Elephant shark MODERN SPECIES 1526 ENSCMIG00000019019 glrx2 (ENSCMIG00000019018) ro60 (ENSCMIG00000019002) uchl5 (ENSCMIG00000018986) RGS1 (ENSCMIG00000018982) ENSCMIG00000018980 rgs18 (ENSCMIG00000018976) ENSCMIG00000018972 ENSCMIG00000018970 ENSCMIG00000018965 uhmk1 (ENSCMIG00000018958) NOS1AP (ENSCMIG00000018950) rgs4 (ENSCMIG00000018945) b3galt2 (ENSCMIG00000018943) rgs5a (ENSCMIG00000018942) uap1 (ENSCMIG00000018933) ##22 DDR2 (ENSCMIG00000018920) hsd17b7 (ENSCMIG00000018913) ENSCMIG00000018904 ENSCMIG00000018902 ENSCMIG00000018900 mgst3 (ENSCMIG00000018897) aldh9a1a.1 (ENSCMIG00000018878) tmco1 (ENSCMIG00000018863) ENSCMIG00000018859 FAM78B (ENSCMIG00000018857) plpp6 (ENSCMIG00000018855) ENSCMIG00000018853 ENSCMIG00000018851 PRRC2C (ENSCMIG00000018826) myoc (ENSCMIG00000018808) Ciona ANCESTRAL SPECIES ENSGT00940000153464.A #22 Ciona intestinalis MODERN SPECIES 13 ENSCING00000022126 ENSCING00000025143 ENSCING00000001309 ENSCING00000022846 ENSCING00000003482 ENSCING00000019829 ENSCING00000003502 n (ENSCING00000003521) ENSCING00000023555 ENSCING00000012970 ENSCING00000012971 ENSCING00000018163 ENSCING00000009441 ENSCING00000009442 ENSCING00000009443 ENSCING00000009444 #22 ENSCING00000023522 ENSCING00000022239 ENSCING00000009445 ENSCING00000021488 ENSCING00000024370 ENSCING00000012967 ENSCING00000020364 ENSCING00000018932 ENSCING00000022178 ENSCING00000021075 ENSCING00000022068 ENSCING00000012968 ENSCING00000009439 ENSCING00000021370 ENSCING00000012969 Ecdysozoa ANCESTRAL SPECIES ENSGT00940000153464.A #22 Fruitfly MODERN SPECIES 16 COX5BL (FBgn0031831) CG9596 (FBgn0031832) COX5B (FBgn0031830) IFT52 (FBgn0031829) eya (FBgn0000320) CG31637 (FBgn0051637) CG9550 (FBgn0031826) CG9547 (FBgn0031824) CG31638 (FBgn0051638) Phf5a (FBgn0031822) epsilonCOP (FBgn0027496) KFase (FBgn0287695) Daxx (FBgn0031820) Sec61alpha (FBgn0086357) CG9536 (FBgn0031818) mmy (FBgn0259749) #22 HemK1 (FBgn0031817) Rchy1 (FBgn0031816) frj (FBgn0031815) retm (FBgn0031814) Acox3 (FBgn0031813) Fic (FBgn0263278) Tig (FBgn0011722) CG13982 (FBgn0031811) CG42369 (FBgn0259715) Nepl6 (FBgn0259716) Nepl5 (FBgn0031808) DIP-epsilon (FBgn0259714) slam (FBgn0043854) Nepl4 (FBgn0031805) CG9500 (FBgn0031804) Caenorhabditis elegans MODERN SPECIES 2 F37A8.2 (WBGene00009502) F37A8.1 (WBGene00009501) ZK1058.9 (WBGene00014207) nit-1 (WBGene00014206) metl-6 (WBGene00014205) ZK1058.3 (WBGene00014203) ccdc-47 (WBGene00014204) pat-3 (WBGene00003930) mmcm-1 (WBGene00014202) tir-1 (WBGene00006575) rpl-3 (WBGene00004414) acs-19 (WBGene00007969) brc-1 (WBGene00000264) cyp-25A4 (WBGene00007967) maph-1.3 (WBGene00007966) C36A4.4 (WBGene00007965) #22 C36A4.11 (WBGene00044167) cyp-25A3 (WBGene00014697) cyp-25A2 (WBGene00007964) cyp-25A1 (WBGene00007963) C36A4.10 (WBGene00007970) cnnm-5 (WBGene00011260) amx-1 (WBGene00000137) dpy-27 (WBGene00001086) toh-1 (WBGene00006591) xbx-5 (WBGene00011974) mtm-3 (WBGene00003476) acy-3 (WBGene00000070) lec-4 (WBGene00002267) gmeb-3 (WBGene00008092) C44F1.1 (WBGene00008091) Yeast MODERN SPECIES 3 ASM4 (YDL088C) NUR1 (YDL089W) RAM1 (YDL090C) UBX3 (YDL091C) SRP14 (YDL092W) PMT5 (YDL093W) YDL094C PMT1 (YDL095W) OPI6 (YDL096C) RPN6 (YDL097C) SNU23 (YDL098C) BUG1 (YDL099W) GET3 (YDL100C) DUN1 (YDL101C) POL3 (YDL102W) QRI1 (YDL103C) #22 QRI7 (YDL104C) NSE4 (YDL105W) PHO2 (YDL106C) MSS2 (YDL107W) KIN28 (YDL108W) YDL109C TMA17 (YDL110C) RRP42 (YDL111C) TRM3 (YDL112W) ATG20 (YDL113C) YDL114W YDL114W-A IWR1 (YDL115C) NUP84 (YDL116W) CYK3 (YDL117W) Fungi/Metazoa group ANCESTRAL SPECIES ENSGT00940000153464.B ##22 Bilateria ANCESTRAL SPECIES ENSGT00940000153464.B ##22 Ecdysozoa DUPLICATION Ecdysozoa ANCESTRAL SPECIES ENSGT00940000153464.B.a ##22 Fruitfly MODERN SPECIES 18 Hsp23 (FBgn0001224) Hsp67Ba (FBgn0001227) Hsp26 (FBgn0001225) CG4461 (FBgn0035982) Hsp22 (FBgn0001223) CG4456 (FBgn0001228) Hsp67Bc (FBgn0001229) Fdx1 (FBgn0011769) CG4452 (FBgn0035981) mRRF1 (FBgn0035980) Klp67A (FBgn0004379) CG34456 (FBgn0085485) Pdxk (FBgn0085484) Svip (FBgn0052039) CG32040 (FBgn0052040) UGP (FBgn0035978) ##22 PGRP-LF (FBgn0035977) PGRP-LC (FBgn0035976) PGRP-LA (FBgn0035975) GluRIB (FBgn0264000) CG4477 (FBgn0035971) CG4483 (FBgn0035970) CG4476 (FBgn0035969) Slc45-1 (FBgn0035968) Rdl (FBgn0004244) nwk (FBgn0263456) Use1 (FBgn0035965) Dhpr (FBgn0035964) bol (FBgn0011206) CG13315 (FBgn0040827) CG32032 (FBgn0043806) Caenorhabditis elegans MODERN SPECIES 2 pot-3 (WBGene00007065) mdt-29 (WBGene00007025) pdr-1 (WBGene00003967) cyk-4 (WBGene00000875) rml-1 (WBGene00010665) ##22 dbn-1 (WBGene00010664) toca-2 (WBGene00010663) mlc-7 (WBGene00023451) K08E3.2 (WBGene00010662) tyr-2 (WBGene00010661) W06F12.3 (WBGene00012307) W06F12.2 (WBGene00012306) lit-1 (WBGene00003048) cyn-2 (WBGene00000878) cul-2 (WBGene00000837) sid-2 (WBGene00004796) dyf-2 (WBGene00001118) aqp-11 (WBGene00000179) flp-15 (WBGene00001458) set-16 (WBGene00011729) Ecdysozoa ANCESTRAL SPECIES ENSGT00940000153464.B.b ##22 Caenorhabditis elegans MODERN SPECIES 6 ZK402.5 (WBGene00022731) ZK402.2 (WBGene00022729) ZK402.1 (WBGene00022728) abu-2 (WBGene00000025) srh-19 (WBGene00005244) F19G12.4 (WBGene00017612) F19G12.8 (WBGene00195184) F19G12.9 (WBGene00195185) F19G12.3 (WBGene00017611) F19G12.11 (WBGene00195188) F19G12.1 (WBGene00017609) sedl-1 (WBGene00021046) zfp-3 (WBGene00021047) W05H7.1 (WBGene00021044) cebp-1 (WBGene00016997) D1005.2 (WBGene00016996) ##22 D1005.6 (WBGene00017000) D1005.5 (WBGene00016999) acly-1 (WBGene00016995) D1005.4 (WBGene00016998) D1005.10 (WBGene00206384) dhs-25 (WBGene00000988) F09E10.5 (WBGene00017295) F09E10.6 (WBGene00017296) F09E10.7 (WBGene00017297) F09E10.1 (WBGene00017294) toca-1 (WBGene00017298) K06A9.3 (WBGene00019437) K06A9.2 (WBGene00019436) K06A9.1 (WBGene00019435) H02F09.3 (WBGene00019146) Chordata ANCESTRAL SPECIES ENSGT00940000153464.B ##22 Ciona ANCESTRAL SPECIES 282 ENSGT00940000153464.B ##22 ENSGT00950000183195.b ENSGT00940000172594 ENSGT00940000171468 Ciona intestinalis DUPLICATION Ciona intestinalis MODERN SPECIES 33 ENSCING00000014790 ENSCING00000021413 ENSCING00000018823 ENSCING00000014796 ENSCING00000015009 ENSCING00000007532 ENSCING00000022096 ENSCING00000007517 ENSCING00000007480 ENSCING00000020608 ENSCING00000007544 ci-rsp9 (ENSCING00000014743) ENSCING00000023224 ENSCING00000015045 ##22 ENSCING00000018664 ENSCING00000007614 ##22 ENSCING00000007611 ENSCING00000023981 ENSCING00000014959 ENSCING00000021037 ENSCING00000023327 ENSCING00000007605 ENSCING00000014896 ENSCING00000014897 ENSCING00000020586 ENSCING00000014898 ENSCING00000022995 ENSCING00000007598 ENSCING00000020377 ENSCING00000020815 ENSCING00000014895 Ciona intestinalis MODERN SPECIES 33 ENSCING00000020377 ENSCING00000007598 ENSCING00000022995 ENSCING00000014898 ENSCING00000020586 ENSCING00000014897 ENSCING00000014896 ENSCING00000007605 ENSCING00000023327 ENSCING00000021037 ENSCING00000014959 ENSCING00000023981 ENSCING00000007611 ENSCING00000007614 ##22 ENSCING00000018664 ENSCING00000015045 ##22 ENSCING00000023224 ci-rsp9 (ENSCING00000014743) ENSCING00000007544 ENSCING00000020608 ENSCING00000007480 ENSCING00000007517 ENSCING00000022096 ENSCING00000007532 ENSCING00000015009 ENSCING00000014796 ENSCING00000018823 ENSCING00000021413 ENSCING00000014790 ENSCING00000022487 ENSCING00000019200 Ciona savignyi MODERN SPECIES 82 ENSCSAVG00000008401 ENSCSAVG00000008391 ENSCSAVG00000008389 ENSCSAVG00000008349 ENSCSAVG00000008332 ENSCSAVG00000008329 ENSCSAVG00000008326 ENSCSAVG00000008184 ENSCSAVG00000008069 ENSCSAVG00000008066 ENSCSAVG00000008061 ENSCSAVG00000008058 ENSCSAVG00000008055 ENSCSAVG00000008053 ENSCSAVG00000007760 ENSCSAVG00000007444 ##22 ENSCSAVG00000007441 ENSCSAVG00000007438 ENSCSAVG00000007436 ENSCSAVG00000007433 ENSCSAVG00000007287 ENSCSAVG00000007093 ENSCSAVG00000007090 ENSCSAVG00000007088 ENSCSAVG00000007084 ENSCSAVG00000007082 ENSCSAVG00000007078 ENSCSAVG00000007046 ENSCSAVG00000007045 ENSCSAVG00000007043 ENSCSAVG00000007035 Vertebrata ANCESTRAL SPECIES ENSGT00940000153464.B ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00940000153464.B ##22 Lamprey MODERN SPECIES 3393 ugp2a (ENSPMAG00000002778) ##22 Hagfish DUPLICATION Hagfish MODERN SPECIES 1052 ENSEBUG00000010392 ENSEBUG00000006046 ENSEBUG00000014179 ENSEBUG00000008460 ENSEBUG00000008803 ENSEBUG00000004688 ##22 ENSEBUG00000009090 ENSEBUG00000003151 Hagfish MODERN SPECIES 277 ENSEBUG00000001170 ENSEBUG00000003621 ENSEBUG00000008268 hpca (ENSEBUG00000005350) ENSEBUG00000007955 ENSEBUG00000016048 bhlhe22 (ENSEBUG00000008856) ENSEBUG00000007341 ENSEBUG00000011972 eif4a3 (ENSEBUG00000003713) ENSEBUG00000015397 ero1b (ENSEBUG00000003191) ENSEBUG00000012184 ENSEBUG00000003618 gng2 (ENSEBUG00000007886) ugp2a (ENSEBUG00000003810) ##22 Gnathostomata ANCESTRAL SPECIES 29 ENSGT00940000158042 ENSGT00390000005537 ENSGT00940000156983.a.a ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000008178 ENSGT00940000158659 ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000157597 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 Elephant shark MODERN SPECIES 1508 bcl11aa (ENSCMIG00000003083) papolg (ENSCMIG00000002931) rel (ENSCMIG00000002772) pus10 (ENSCMIG00000002725) SANBR (ENSCMIG00000002686) USP34 (ENSCMIG00000002560) FAM161A (ENSCMIG00000002520) cct4 (ENSCMIG00000002389) commd1 (ENSCMIG00000002319) b3gnt2a (ENSCMIG00000002317) ENSCMIG00000002311 ENSCMIG00000002307 EHBP1 (ENSCMIG00000002230) WDPCP (ENSCMIG00000002187) mdh1 (ENSCMIG00000002025) ugp2 (ENSCMIG00000001606) ##22 vps54 (ENSCMIG00000001326) PELI1 (ENSCMIG00000001287) lgalslb (ENSCMIG00000001270) tbp (ENSCMIG00000001238) btbd9 (ENSCMIG00000001219) ENSCMIG00000001198 ENSCMIG00000001183 cmtr1 (ENSCMIG00000000861) ENSCMIG00000000695 ENSCMIG00000000686 ENSCMIG00000000577 capn1a (ENSCMIG00000000327) TTBK1 (ENSCMIG00000000227) ENSCMIG00000020058 slc22a7a (ENSCMIG00000020057) Euteleostomi ANCESTRAL SPECIES 5 ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Sarcopterygii ANCESTRAL SPECIES 23 ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b Tetrapoda ANCESTRAL SPECIES 15 ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Amniota ANCESTRAL SPECIES 12 ENSGT01030000236025 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Mammalia ANCESTRAL SPECIES 22 ENSGT01030000236025 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Theria ANCESTRAL SPECIES 13 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Marsupialia ANCESTRAL SPECIES 19 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Diprotodontia ANCESTRAL SPECIES 2 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956.n ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956.n ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b koala MODERN SPECIES 20 ENSPCIG00000028076 USP34 (ENSPCIG00000027791) XPO1 (ENSPCIG00000027737) ENSPCIG00000024939 ENSPCIG00000024933 ENSPCIG00000024931 COMMD1 (ENSPCIG00000024929) ENSPCIG00000018941 B3GNT2 (ENSPCIG00000024925) TMEM17 (ENSPCIG00000024919) EHBP1 (ENSPCIG00000005257) OTX1 (ENSPCIG00000024582) ENSPCIG00000037374 WDPCP (ENSPCIG00000024581) MDH1 (ENSPCIG00000024579) UGP2 (ENSPCIG00000022314) ##22 VPS54 (ENSPCIG00000022325) PELI1 (ENSPCIG00000022340) LGALSL (ENSPCIG00000020092) ENSPCIG00000025803 AFTPH (ENSPCIG00000025802) SERTAD2 (ENSPCIG00000025805) SLC1A4 (ENSPCIG00000023205) ENSPCIG00000023208 RAB1A (ENSPCIG00000023212) ACTR2 (ENSPCIG00000023217) SPRED2 (ENSPCIG00000035990) MEIS1 (ENSPCIG00000006632) ENSPCIG00000016961 ENSPCIG00000018629 DNAAF10 (ENSPCIG00000018627) Common wonbat MODERN SPECIES 1017 SANBR (ENSVURG00010013712) ENSVURG00010013697 USP34 (ENSVURG00010013652) XPO1 (ENSVURG00010013626) ENSVURG00010013620 ENSVURG00010013612 CCT4 (ENSVURG00010013602) COMMD1 (ENSVURG00010013596) B3GNT2 (ENSVURG00010013583) TMEM17 (ENSVURG00010013563) EHBP1 (ENSVURG00010013361) OTX1 (ENSVURG00010013336) ENSVURG00010013329 WDPCP (ENSVURG00010013315) MDH1 (ENSVURG00010013259) UGP2 (ENSVURG00010013228) ##22 VPS54 (ENSVURG00010013192) PELI1 (ENSVURG00010013173) LGALSL (ENSVURG00010013162) ENSVURG00010013145 AFTPH (ENSVURG00010013132) SERTAD2 (ENSVURG00010013124) SLC1A4 (ENSVURG00010013104) ENSVURG00010013094 RAB1A (ENSVURG00010013043) ACTR2 (ENSVURG00010013014) SPRED2 (ENSVURG00010012998) MEIS1 (ENSVURG00010012689) ENSVURG00010012665 ENSVURG00010012656 C1D (ENSVURG00010012637) Wallaby MODERN SPECIES 7819 UGP2 (ENSMEUG00000003329) ##22 ENSMEUG00000003343 Tasmanian devil MODERN SPECIES 1 PEX13 (ENSSHAG00000013994) SANBR (ENSSHAG00000013637) ENSSHAG00000013408 ENSSHAG00000013229 USP34 (ENSSHAG00000012141) XPO1 (ENSSHAG00000011230) ENSSHAG00000008962 CCT4 (ENSSHAG00000008579) B3GNT2 (ENSSHAG00000027237) COMMD1 (ENSSHAG00000005803) TMEM17 (ENSSHAG00000014235) EHBP1 (ENSSHAG00000011490) OTX1 (ENSSHAG00000011389) WDPCP (ENSSHAG00000009447) MDH1 (ENSSHAG00000008365) UGP2 (ENSSHAG00000003089) ##22 VPS54 (ENSSHAG00000000961) PELI1 (ENSSHAG00000024330) LGALSL (ENSSHAG00000026611) AFTPH (ENSSHAG00000010633) ENSSHAG00000028826 SERTAD2 (ENSSHAG00000022880) SLC1A4 (ENSSHAG00000029893) ENSSHAG00000004687 RAB1A (ENSSHAG00000027574) ACTR2 (ENSSHAG00000000220) SPRED2 (ENSSHAG00000030799) MEIS1 (ENSSHAG00000016546) ENSSHAG00000013030 ENSSHAG00000012254 C1D (ENSSHAG00000020536) Opossum DUPLICATION Opossum MODERN SPECIES ENSMODG00000023119 USP34 (ENSMODG00000002734) XPO1 (ENSMODG00000002831) ENSMODG00000002850 ENSMODG00000002882 COMMD1 (ENSMODG00000002887) B3GNT2 (ENSMODG00000023125) TMEM17 (ENSMODG00000002895) ENSMODG00000046978 EHBP1 (ENSMODG00000002986) OTX1 (ENSMODG00000037978) ENSMODG00000038398 WDPCP (ENSMODG00000003049) MDH1 (ENSMODG00000003073) ENSMODG00000038904 ENSMODG00000003102 ##22 VPS54 (ENSMODG00000003191) PELI1 (ENSMODG00000003212) ENSMODG00000003226 ENSMODG00000047159 AFTPH (ENSMODG00000003235) SERTAD2 (ENSMODG00000023126) SLC1A4 (ENSMODG00000003310) ENSMODG00000003315 RAB1A (ENSMODG00000003340) ENSMODG00000047741 ACTR2 (ENSMODG00000003364) SPRED2 (ENSMODG00000003380) MEIS1 (ENSMODG00000003396) ENSMODG00000003554 C1D (ENSMODG00000003561) Opossum MODERN SPECIES ENSMODG00000014631 CRIP1 (ENSMODG00000014633) CRIP2 (ENSMODG00000014642) MTA1 (ENSMODG00000014663) ENSMODG00000014668 PACS2 (ENSMODG00000014669) BTBD6 (ENSMODG00000044592) ENSMODG00000038597 ENSMODG00000014690 ENSMODG00000042891 JAG2 (ENSMODG00000014707) ENSMODG00000051319 ENSMODG00000014715 ENSMODG00000014719 HNRNPA0 (ENSMODG00000014720) ENSMODG00000015026 ##22 KLHL3 (ENSMODG00000014989) ENSMODG00000015032 SPOCK1 (ENSMODG00000046877) ENSMODG00000045338 ENSMODG00000050201 TRPC7 (ENSMODG00000015142) SMIM32 (ENSMODG00000042955) SMAD5 (ENSMODG00000015152) TGFBI (ENSMODG00000015162) LECT2 (ENSMODG00000015175) ENSMODG00000027536 SLC25A21 (ENSMODG00000012677) PAX9 (ENSMODG00000012681) ENSMODG00000043940 NKX2-8 (ENSMODG00000012683) Eutheria ANCESTRAL SPECIES 2 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000168989 ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000155078.a.b.a.b ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00390000003682 ENSGT00940000153876.B Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Carnivora ANCESTRAL SPECIES 19 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Caniformia ANCESTRAL SPECIES 18 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Caniformia_b ANCESTRAL SPECIES 11 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Ursidae ANCESTRAL SPECIES 9 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.p ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Ursus ANCESTRAL SPECIES 20 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00390000009819.a.a.o ENSGT00530000063410.a.p ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 American black bear MODERN SPECIES 76 UGP2 (ENSUAMG00000020332) ##22 VPS54 (ENSUAMG00000020329) PELI1 (ENSUAMG00000020326) LGALSL (ENSUAMG00000020323) ENSUAMG00000020321 AFTPH (ENSUAMG00000020320) Polar bear MODERN SPECIES 223 ENSUMAG00000019225 ENSUMAG00000019230 USP34 (ENSUMAG00000019333) XPO1 (ENSUMAG00000019859) ENSUMAG00000019866 FAM161A (ENSUMAG00000019872) CCT4 (ENSUMAG00000019983) COMMD1 (ENSUMAG00000020922) B3GNT2 (ENSUMAG00000020928) TMEM17 (ENSUMAG00000020931) EHBP1 (ENSUMAG00000020940) ENSUMAG00000020944 WDPCP (ENSUMAG00000020957) ENSUMAG00000020964 MDH1 (ENSUMAG00000020965) UGP2 (ENSUMAG00000020975) ##22 VPS54 (ENSUMAG00000020982) PELI1 (ENSUMAG00000021002) LGALSL (ENSUMAG00000021007) AFTPH (ENSUMAG00000021014) ENSUMAG00000021019 SLC1A4 (ENSUMAG00000021032) CEP68 (ENSUMAG00000021035) RAB1A (ENSUMAG00000021038) ENSUMAG00000021041 ACTR2 (ENSUMAG00000021042) SPRED2 (ENSUMAG00000021053) MEIS1 (ENSUMAG00000021098) ETAA1 (ENSUMAG00000021106) C1D (ENSUMAG00000021118) DNAAF10 (ENSUMAG00000021123) Mustelinae ANCESTRAL SPECIES 16 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 American mink MODERN SPECIES 268 WDPCP (ENSNVIG00000010207) MDH1 (ENSNVIG00000010261) ENSNVIG00000010282 UGP2 (ENSNVIG00000010305) ##22 VPS54 (ENSNVIG00000010360) PELI1 (ENSNVIG00000010542) LGALSL (ENSNVIG00000010559) AFTPH (ENSNVIG00000010584) SERTAD2 (ENSNVIG00000010622) ARHGAP24 (ENSNVIG00000010647) MAPK10 (ENSNVIG00000010737) ENSNVIG00000011131 Ferret MODERN SPECIES 169 USP34 (ENSMPUG00000005248) XPO1 (ENSMPUG00000005560) FAM161A (ENSMPUG00000005585) CCT4 (ENSMPUG00000005615) COMMD1 (ENSMPUG00000005842) B3GNT2 (ENSMPUG00000018818) ENSMPUG00000005847 TMEM17 (ENSMPUG00000005851) ENSMPUG00000005871 EHBP1 (ENSMPUG00000005877) OTX1 (ENSMPUG00000005901) ENSMPUG00000005912 WDPCP (ENSMPUG00000005918) MDH1 (ENSMPUG00000005929) ENSMPUG00000005940 UGP2 (ENSMPUG00000005966) ##22 VPS54 (ENSMPUG00000006057) PELI1 (ENSMPUG00000006068) ENSMPUG00000006072 LGALSL (ENSMPUG00000006075) AFTPH (ENSMPUG00000006081) SERTAD2 (ENSMPUG00000018821) ENSMPUG00000006090 ENSMPUG00000006094 SLC1A4 (ENSMPUG00000006098) CEP68 (ENSMPUG00000006108) RAB1A (ENSMPUG00000006139) ACTR2 (ENSMPUG00000006176) SPRED2 (ENSMPUG00000006186) MEIS1 (ENSMPUG00000006198) ETAA1 (ENSMPUG00000006214) Canidae ANCESTRAL SPECIES 10 ENSGT01030000236025 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00950000183164.E.c.b.b ENSGT00940000156327 ENSGT00390000017839.o.a ENSGT00390000009597 ENSGT00390000015405 Canis_lupus ANCESTRAL SPECIES 9 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00940000154546 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00390000017004.a.a.q.a ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00950000183164.E.c.b.b ENSGT00940000156327 ENSGT00390000017839.o.a ENSGT00390000009597 Dog MODERN SPECIES 1 SANBR (ENSCAFG00845013376) C2orf74 (ENSCAFG00845013418) USP34 (ENSCAFG00845013490) XPO1 (ENSCAFG00845016081) FAM161A (ENSCAFG00845016188) CCT4 (ENSCAFG00845016454) COMMD1 (ENSCAFG00845016604) B3GNT2 (ENSCAFG00845016685) TMEM17 (ENSCAFG00845016745) EHBP1 (ENSCAFG00845017216) OTX1 (ENSCAFG00845018084) WDPCP (ENSCAFG00845018266) ENSCAFG00845018841 ENSCAFG00845018885 MDH1 (ENSCAFG00845019026) UGP2 (ENSCAFG00845019476) ##22 VPS54 (ENSCAFG00845019815) PELI1 (ENSCAFG00845020350) LGALSL (ENSCAFG00845020462) ENSCAFG00845020543 AFTPH (ENSCAFG00845020600) SLC1A4 (ENSCAFG00845020925) CEP68 (ENSCAFG00845021026) RAB1A (ENSCAFG00845021139) ENSCAFG00845021343 ENSCAFG00845021409 ACTR2 (ENSCAFG00845021843) SPRED2 (ENSCAFG00845022023) ENSCAFG00845022112 MEIS1 (ENSCAFG00845022164) ENSCAFG00845022346 Dingo MODERN SPECIES 307 C2orf74 (ENSCAFG00020026882) USP34 (ENSCAFG00020026887) ENSCAFG00020026910 ENSCAFG00020026913 FAM161A (ENSCAFG00020026916) ENSCAFG00020026918 COMMD1 (ENSCAFG00020026920) B3GNT2 (ENSCAFG00020026921) TMEM17 (ENSCAFG00020026923) EHBP1 (ENSCAFG00020026924) OTX1 (ENSCAFG00020026926) WDPCP (ENSCAFG00020026927) ENSCAFG00020026930 ENSCAFG00020026931 MDH1 (ENSCAFG00020026933) UGP2 (ENSCAFG00020026936) ##22 VPS54 (ENSCAFG00020026938) PELI1 (ENSCAFG00020026939) LGALSL (ENSCAFG00020026947) AFTPH (ENSCAFG00020026953) SLC1A4 (ENSCAFG00020026962) CEP68 (ENSCAFG00020026969) RAB1A (ENSCAFG00020026971) ENSCAFG00020026973 ACTR2 (ENSCAFG00020026978) ENSCAFG00020026981 SPRED2 (ENSCAFG00020026983) ENSCAFG00020026985 ENSCAFG00020026987 MEIS1 (ENSCAFG00020026989) ENSCAFG00020026992 Red fox MODERN SPECIES 10 USP34 (ENSVVUG00000010616) XPO1 (ENSVVUG00000012009) FAM161A (ENSVVUG00000012026) CCT4 (ENSVVUG00000012040) COMMD1 (ENSVVUG00000012078) B3GNT2 (ENSVVUG00000012079) TMEM17 (ENSVVUG00000012092) EHBP1 (ENSVVUG00000012144) OTX1 (ENSVVUG00000012226) ENSVVUG00000012230 ENSVVUG00000012232 WDPCP (ENSVVUG00000012239) ENSVVUG00000012256 ENSVVUG00000012263 MDH1 (ENSVVUG00000012288) UGP2 (ENSVVUG00000012309) ##22 VPS54 (ENSVVUG00000012313) PELI1 (ENSVVUG00000012332) ENSVVUG00000012340 LGALSL (ENSVVUG00000012353) AFTPH (ENSVVUG00000012375) Felidae ANCESTRAL SPECIES 3 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000166485.b ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00960000190724 ENSGT00940000156841 ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00950000183164.E.c.b.b ENSGT00940000156327 Panthera ANCESTRAL SPECIES 2 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000166485.b ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337.f ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00950000183164.E.c.b.b ENSGT00940000156327 ENSGT00390000009597 Panthera_a ANCESTRAL SPECIES 1 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000166485.b ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337.f ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000164277 ENSGT00940000154556 ENSGT00940000156841 ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00950000183164.E.c.b.b ENSGT00940000156327 lion MODERN SPECIES 3 ENSPLOG00000001011 USP34 (ENSPLOG00000000913) XPO1 (ENSPLOG00000000831) ENSPLOG00000000810 ENSPLOG00000000799 ENSPLOG00000000788 CCT4 (ENSPLOG00000000744) ENSPLOG00000000693 COMMD1 (ENSPLOG00000000685) B3GNT2 (ENSPLOG00000000672) TMEM17 (ENSPLOG00000000647) EHBP1 (ENSPLOG00000000545) OTX1 (ENSPLOG00000000484) WDPCP (ENSPLOG00000000468) MDH1 (ENSPLOG00000000419) UGP2 (ENSPLOG00000000363) ##22 VPS54 (ENSPLOG00000000305) PELI1 (ENSPLOG00000000230) LGALSL (ENSPLOG00000000160) AFTPH (ENSPLOG00000000129) SERTAD2 (ENSPLOG00000000111) SLC1A4 (ENSPLOG00000015581) CEP68 (ENSPLOG00000015547) RAB1A (ENSPLOG00000015420) ENSPLOG00000015344 ACTR2 (ENSPLOG00000015113) SPRED2 (ENSPLOG00000015039) ENSPLOG00000015010 MEIS1 (ENSPLOG00000014760) ETAA1 (ENSPLOG00000014630) ENSPLOG00000014602 leopard MODERN SPECIES ENSPPRG00000024227 ENSPPRG00000024371 USP34 (ENSPPRG00000024570) XPO1 (ENSPPRG00000024625) ENSPPRG00000024662 FAM161A (ENSPPRG00000024716) CCT4 (ENSPPRG00000024738) COMMD1 (ENSPPRG00000024784) B3GNT2 (ENSPPRG00000020752) ENSPPRG00000024813 TMEM17 (ENSPPRG00000024820) EHBP1 (ENSPPRG00000024840) OTX1 (ENSPPRG00000024867) WDPCP (ENSPPRG00000024890) ENSPPRG00000024948 UGP2 (ENSPPRG00000024974) ##22 VPS54 (ENSPPRG00000025012) PELI1 (ENSPPRG00000025026) ENSPPRG00000025036 AFTPH (ENSPPRG00000025039) ENSPPRG00000025068 SERTAD2 (ENSPPRG00000020703) SLC1A4 (ENSPPRG00000025070) CEP68 (ENSPPRG00000025073) RAB1A (ENSPPRG00000025077) ENSPPRG00000021550 ACTR2 (ENSPPRG00000020870) SPRED2 (ENSPPRG00000020675) ENSPPRG00000020632 ENSPPRG00000020658 MEIS1 (ENSPPRG00000018537) Tiger MODERN SPECIES 56 SANBR (ENSPTIG00000011564) C2orf74 (ENSPTIG00000011235) ENSPTIG00000010228 ENSPTIG00000008945 USP34 (ENSPTIG00000016516) XPO1 (ENSPTIG00000012259) FAM161A (ENSPTIG00000011182) CCT4 (ENSPTIG00000009450) COMMD1 (ENSPTIG00000008560) B3GNT2 (ENSPTIG00000006426) TMEM17 (ENSPTIG00000007396) EHBP1 (ENSPTIG00000005411) OTX1 (ENSPTIG00000021186) WDPCP (ENSPTIG00000018461) MDH1 (ENSPTIG00000015287) UGP2 (ENSPTIG00000012159) ##22 VPS54 (ENSPTIG00000007451) PELI1 (ENSPTIG00000005767) ENSPTIG00000003080 ENSPTIG00000000654 AFTPH (ENSPTIG00000016879) SERTAD2 (ENSPTIG00000006044) ENSPTIG00000016054 CEP68 (ENSPTIG00000014965) RAB1A (ENSPTIG00000013471) ACTR2 (ENSPTIG00000011973) SPRED2 (ENSPTIG00000010714) ENSPTIG00000010083 MEIS1 (ENSPTIG00000008411) Cat MODERN SPECIES 2 SANBR (ENSFCAG00000014456) CA3H2orf74 (ENSFCAG00000019120) ENSFCAG00000009473 USP34 (ENSFCAG00000009478) XPO1 (ENSFCAG00000002702) ENSFCAG00000049089 FAM161A (ENSFCAG00000011118) CCT4 (ENSFCAG00000024322) COMMD1 (ENSFCAG00000027737) B3GNT2 (ENSFCAG00000009061) TMEM17 (ENSFCAG00000046240) EHBP1 (ENSFCAG00000026831) OTX1 (ENSFCAG00000044742) WDPCP (ENSFCAG00000006657) MDH1 (ENSFCAG00000024183) UGP2 (ENSFCAG00000018580) ##22 VPS54 (ENSFCAG00000008259) PELI1 (ENSFCAG00000030163) ENSFCAG00000045546 AFTPH (ENSFCAG00000028719) SERTAD2 (ENSFCAG00000002492) SLC1A4 (ENSFCAG00000001506) CEP68 (ENSFCAG00000030849) RAB1A (ENSFCAG00000002536) ENSFCAG00000014868 ACTR2 (ENSFCAG00000004960) ENSFCAG00000051060 SPRED2 (ENSFCAG00000004962) ENSFCAG00000028286 ENSFCAG00000037094 MEIS1 (ENSFCAG00000036549) Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Equus ANCESTRAL SPECIES 7 ENSGT01090000263393 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Donkey MODERN SPECIES 26 ENSEASG00005002092 USP34 (ENSEASG00005002220) XPO1 (ENSEASG00005007223) ENSEASG00005007225 FAM161A (ENSEASG00005007228) CCT4 (ENSEASG00005007230) COMMD1 (ENSEASG00005007231) ENSEASG00005007233 ENSEASG00005007234 B3GNT2 (ENSEASG00005032411) TMEM17 (ENSEASG00005031233) EHBP1 (ENSEASG00005007241) OTX1 (ENSEASG00005007243) WDPCP (ENSEASG00005007245) MDH1 (ENSEASG00005007262) UGP2 (ENSEASG00005007264) ##22 VPS54 (ENSEASG00005007268) PELI1 (ENSEASG00005007279) LGALSL (ENSEASG00005007283) AFTPH (ENSEASG00005007290) SERTAD2 (ENSEASG00005026993) ENSEASG00005035148 SLC1A4 (ENSEASG00005007296) CEP68 (ENSEASG00005007297) RAB1A (ENSEASG00005034669) ACTR2 (ENSEASG00005007299) SPRED2 (ENSEASG00005027956) MEIS1 (ENSEASG00005007304) ETAA1 (ENSEASG00005007305) C1D (ENSEASG00005033257) DNAAF10 (ENSEASG00005007308) Horse MODERN SPECIES 6 ENSECAG00000044596 ENSECAG00000060044 ENSECAG00000059740 XPO1 (ENSECAG00000024920) FAM161A (ENSECAG00000024614) CCT4 (ENSECAG00000016982) ENSECAG00000060047 COMMD1 (ENSECAG00000016963) B3GNT2 (ENSECAG00000016959) ENSECAG00000032544 TMEM17 (ENSECAG00000015697) EHBP1 (ENSECAG00000009318) OTX1 (ENSECAG00000024462) MDH1 (ENSECAG00000010849) WDPCP (ENSECAG00000019956) UGP2 (ENSECAG00000016705) ##22 VPS54 (ENSECAG00000022920) PELI1 (ENSECAG00000021804) LGALSL (ENSECAG00000018099) AFTPH (ENSECAG00000012175) SERTAD2 (ENSECAG00000040555) SLC1A4 (ENSECAG00000011229) CEP68 (ENSECAG00000009985) RAB1A (ENSECAG00000009926) ACTR2 (ENSECAG00000009219) SPRED2 (ENSECAG00000005881) MEIS1 (ENSECAG00000009387) ETAA1 (ENSECAG00000006358) C1D (ENSECAG00000002187) ENSECAG00000057082 PNO1 (ENSECAG00000011263) Chiroptera ANCESTRAL SPECIES 10 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Megabat MODERN SPECIES 2175 UGP2 (ENSPVAG00000015583) ##22 VPS54 (ENSPVAG00000015585) Microchiroptera ANCESTRAL SPECIES 14 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Microbat MODERN SPECIES 943 SANBR (ENSMLUG00000007627) C2orf74 (ENSMLUG00000027969) ENSMLUG00000003408 ENSMLUG00000027445 USP34 (ENSMLUG00000003414) XPO1 (ENSMLUG00000010670) FAM161A (ENSMLUG00000030514) CCT4 (ENSMLUG00000016138) ENSMLUG00000022697 B3GNT2 (ENSMLUG00000009924) ENSMLUG00000027762 EHBP1 (ENSMLUG00000002314) OTX1 (ENSMLUG00000002330) WDPCP (ENSMLUG00000002336) MDH1 (ENSMLUG00000002352) UGP2 (ENSMLUG00000003123) ##22 VPS54 (ENSMLUG00000003130) PELI1 (ENSMLUG00000003152) ENSMLUG00000015944 LGALSL (ENSMLUG00000008001) AFTPH (ENSMLUG00000008012) SERTAD2 (ENSMLUG00000013854) SLC1A4 (ENSMLUG00000002430) CEP68 (ENSMLUG00000002435) RAB1A (ENSMLUG00000009489) ACTR2 (ENSMLUG00000005227) SPRED2 (ENSMLUG00000005236) Greater horseshoe bat MODERN SPECIES 4 ENSRFEG00010009602 USP34 (ENSRFEG00010009538) XPO1 (ENSRFEG00010009458) FAM161A (ENSRFEG00010009411) ENSRFEG00010009347 COMMD1 (ENSRFEG00010009299) B3GNT2 (ENSRFEG00010009289) ENSRFEG00010009258 ENSRFEG00010009225 ENSRFEG00010009180 TMEM17 (ENSRFEG00010009150) EHBP1 (ENSRFEG00010008993) OTX1 (ENSRFEG00010008915) WDPCP (ENSRFEG00010008801) MDH1 (ENSRFEG00010008617) UGP2 (ENSRFEG00010008438) ##22 VPS54 (ENSRFEG00010008048) PELI1 (ENSRFEG00010008007) LGALSL (ENSRFEG00010007948) AFTPH (ENSRFEG00010007890) SERTAD2 (ENSRFEG00010007864) SLC1A4 (ENSRFEG00010007793) CEP68 (ENSRFEG00010007746) RAB1A (ENSRFEG00010007659) ENSRFEG00010007617 ACTR2 (ENSRFEG00010007536) SPRED2 (ENSRFEG00010007454) ENSRFEG00010007383 MEIS1 (ENSRFEG00010007165) ETAA1 (ENSRFEG00010007107) ENSRFEG00010007018 Artiodactyla ANCESTRAL SPECIES 16 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Suina ANCESTRAL SPECIES 13 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Chacoan peccary MODERN SPECIES 777 SANBR (ENSCWAG00000013586) C2orf74 (ENSCWAG00000013830) ENSCWAG00000013858 USP34 (ENSCWAG00000013898) XPO1 (ENSCWAG00000014013) FAM161A (ENSCWAG00000014151) CCT4 (ENSCWAG00000014318) ENSCWAG00000014428 B3GNT2 (ENSCWAG00000014453) ENSCWAG00000014470 TMEM17 (ENSCWAG00000014499) EHBP1 (ENSCWAG00000014544) OTX1 (ENSCWAG00000014783) ENSCWAG00000014828 MDH1 (ENSCWAG00000014856) UGP2 (ENSCWAG00000014887) ##22 VPS54 (ENSCWAG00000015086) PELI1 (ENSCWAG00000015638) LGALSL (ENSCWAG00000015689) AFTPH (ENSCWAG00000015787) SERTAD2 (ENSCWAG00000015818) SLC1A4 (ENSCWAG00000015836) CEP68 (ENSCWAG00000015895) RAB1A (ENSCWAG00000016000) ENSCWAG00000016093 ACTR2 (ENSCWAG00000016124) ENSCWAG00000016192 SPRED2 (ENSCWAG00000016216) MEIS1 (ENSCWAG00000016382) ETAA1 (ENSCWAG00000017059) C1D (ENSCWAG00000017088) Pig MODERN SPECIES 11 ENSSSCG00000047643 USP34 (ENSSSCG00000008382) XPO1 (ENSSSCG00000028228) ENSSSCG00000038591 FAM161A (ENSSSCG00000008378) CCT4 (ENSSSCG00000008377) COMMD1 (ENSSSCG00000008376) B3GNT2 (ENSSSCG00000008374) ENSSSCG00000028518 TMEM17 (ENSSSCG00000026713) EHBP1 (ENSSSCG00000008372) OTX1 (ENSSSCG00000037564) ENSSSCG00000030195 WDPCP (ENSSSCG00000057114) MDH1 (ENSSSCG00000025751) UGP2 (ENSSSCG00000008368) ##22 VPS54 (ENSSSCG00000027509) PELI1 (ENSSSCG00000028947) LGALSL (ENSSSCG00000030005) AFTPH (ENSSSCG00000008363) SERTAD2 (ENSSSCG00000037002) SLC1A4 (ENSSSCG00000028282) CEP68 (ENSSSCG00000008360) RAB1A (ENSSSCG00000008359) ACTR2 (ENSSSCG00000008358) SPRED2 (ENSSSCG00000008357) ENSSSCG00000044348 MEIS1 (ENSSSCG00000039161) ETAA1 (ENSSSCG00000023908) C1D (ENSSSCG00000039331) DNAAF10 (ENSSSCG00000008353) Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00390000003682.gb.b ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Cetacea DUPLICATION Cetacea ANCESTRAL SPECIES 16 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B.i ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Odontoceti ANCESTRAL SPECIES 15 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000168989 ENSGT00390000002738.a.e.a ENSGT00940000153464.B.i ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00390000003682.gb.a.a.b ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.l ENSGT00940000168989 ENSGT00390000002738.a.e.a ENSGT00940000153464.B.i ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00390000003682.gb.a.a.b ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.l ENSGT00940000168989 ENSGT00390000002738.a.e.a ENSGT00940000153464.B.i ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00390000003682.gb.a.a.b.b ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Monodontidae ANCESTRAL SPECIES 13 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00950000182802.A.ab.a.a.a.a.b.b.a ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.l ENSGT00390000002738.a.e.a ENSGT00940000153464.B.i ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00390000003682.gb.a.a.b.b ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Narwhal MODERN SPECIES 305 C2orf74 (ENSMMNG00015009383) ENSMMNG00015009370 USP34 (ENSMMNG00015009324) XPO1 (ENSMMNG00015009286) FAM161A (ENSMMNG00015009266) CCT4 (ENSMMNG00015009244) COMMD1 (ENSMMNG00015009232) B3GNT2 (ENSMMNG00015009227) TMEM17 (ENSMMNG00015009216) ENSMMNG00015009209 EHBP1 (ENSMMNG00015009174) OTX1 (ENSMMNG00015009119) WDPCP (ENSMMNG00015009094) ENSMMNG00015009066 PHPT1 (ENSMMNG00015009040) ENSMMNG00015009005 ##22 VPS54 (ENSMMNG00015016195) PELI1 (ENSMMNG00015016144) LGALSL (ENSMMNG00015016100) AFTPH (ENSMMNG00015016029) SERTAD2 (ENSMMNG00015016005) SLC1A4 (ENSMMNG00015015960) CEP68 (ENSMMNG00015015909) RAB1A (ENSMMNG00015015848) ACTR2 (ENSMMNG00015015753) SPRED2 (ENSMMNG00015015689) ENSMMNG00015015655 MEIS1 (ENSMMNG00015015523) ETAA1 (ENSMMNG00015015495) C1D (ENSMMNG00015015470) DNAAF10 (ENSMMNG00015015443) Beluga whale MODERN SPECIES 42 AHSA2 (ENSDLEG00000015689) USP34 (ENSDLEG00000014462) XPO1 (ENSDLEG00000014180) ENSDLEG00000014158 FAM161A (ENSDLEG00000014083) CCT4 (ENSDLEG00000014042) COMMD1 (ENSDLEG00000014033) B3GNT2 (ENSDLEG00000014023) TMEM17 (ENSDLEG00000014013) ENSDLEG00000014005 EHBP1 (ENSDLEG00000013833) OTX1 (ENSDLEG00000013795) WDPCP (ENSDLEG00000013723) MDH1 (ENSDLEG00000013685) ENSDLEG00000013659 UGP2 (ENSDLEG00000013637) ##22 ENSDLEG00000013630 VPS54 (ENSDLEG00000013588) PELI1 (ENSDLEG00000013564) LGALSL (ENSDLEG00000013531) AFTPH (ENSDLEG00000013504) SERTAD2 (ENSDLEG00000013497) SLC1A4 (ENSDLEG00000013482) CEP68 (ENSDLEG00000013462) RAB1A (ENSDLEG00000013451) ACTR2 (ENSDLEG00000013424) SPRED2 (ENSDLEG00000013406) MEIS1 (ENSDLEG00000013356) ETAA1 (ENSDLEG00000013344) C1D (ENSDLEG00000013334) WDR92 (ENSDLEG00000005842) Dolphin MODERN SPECIES 1784 UGP2 (ENSTTRG00000000694) ##22 VPS54 (ENSTTRG00000000696) PELI1 (ENSTTRG00000000697) Sperm whale MODERN SPECIES 3 ENSPCTG00005005788 C2orf74 (ENSPCTG00005005817) ENSPCTG00005005896 USP34 (ENSPCTG00005005959) XPO1 (ENSPCTG00005006261) FAM161A (ENSPCTG00005006353) CCT4 (ENSPCTG00005006446) COMMD1 (ENSPCTG00005006502) B3GNT2 (ENSPCTG00005006518) TMEM17 (ENSPCTG00005006531) EHBP1 (ENSPCTG00005006603) OTX1 (ENSPCTG00005006769) WDPCP (ENSPCTG00005006829) MDH1 (ENSPCTG00005007119) ENSPCTG00005007304 UGP2 (ENSPCTG00005007338) ##22 VPS54 (ENSPCTG00005007443) PELI1 (ENSPCTG00005007650) ENSPCTG00005007660 LGALSL (ENSPCTG00005007670) AFTPH (ENSPCTG00005007713) SERTAD2 (ENSPCTG00005007784) ENSPCTG00005007798 CEP68 (ENSPCTG00005007824) RAB1A (ENSPCTG00005007858) ACTR2 (ENSPCTG00005007920) SPRED2 (ENSPCTG00005008031) ENSPCTG00005008120 ENSPCTG00005008130 MEIS1 (ENSPCTG00005008167) ETAA1 (ENSPCTG00005008337) Blue whale MODERN SPECIES 4 SANBR (ENSBMSG00010018500) C2orf74 (ENSBMSG00010018456) ENSBMSG00010018430 XPO1 (ENSBMSG00010017484) ENSBMSG00010017465 ENSBMSG00010017432 CCT4 (ENSBMSG00010017396) COMMD1 (ENSBMSG00010017362) ENSBMSG00010017350 B3GNT2 (ENSBMSG00010017335) TMEM17 (ENSBMSG00010017316) EHBP1 (ENSBMSG00010016917) OTX1 (ENSBMSG00010016810) WDPCP (ENSBMSG00010016471) MDH1 (ENSBMSG00010016335) ENSBMSG00010016142 ##22 VPS54 (ENSBMSG00010015929) PELI1 (ENSBMSG00010015886) LGALSL (ENSBMSG00010015854) ENSBMSG00010015828 AFTPH (ENSBMSG00010015789) SERTAD2 (ENSBMSG00010015761) ENSBMSG00010015739 CEP68 (ENSBMSG00010015630) RAB1A (ENSBMSG00010015536) ACTR2 (ENSBMSG00010015452) ENSBMSG00010015420 SPRED2 (ENSBMSG00010015313) MEIS1 (ENSBMSG00010014951) ETAA1 (ENSBMSG00010014898) C1D (ENSBMSG00010014843) Cetacea ANCESTRAL SPECIES 12 ENSGT00940000156434 ENSGT00940000158012 ENSGT00670000098059.k.b ENSGT00940000157158.d ENSGT00390000009194.b ENSGT00940000157225 ENSGT00730000111184 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000153464.B.j ##22 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00920000150804 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A Odontoceti ANCESTRAL SPECIES 11 ENSGT00940000156434 ENSGT00940000158012 ENSGT00670000098059.k.b ENSGT00940000157158.d ENSGT00390000009194.b ENSGT00940000157225 ENSGT00730000111184 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000153464.B.j ##22 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00920000150804 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A Odontoceti_a ANCESTRAL SPECIES 26 ENSGT00940000156434 ENSGT00940000158012.b ENSGT00670000098059.k.b ENSGT00940000157158.d ENSGT00390000009194.b ENSGT00940000157225 ENSGT00730000111184.a ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000153464.B.j ##22 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00910000148620.c.b ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000155694 Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00940000156434 ENSGT00940000158012.b ENSGT00670000098059.k.b ENSGT00940000157158.d ENSGT00390000009194.b ENSGT00940000157225 ENSGT00730000111184.a ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000153464.B.j ##22 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00910000148620.c.b ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000155694 Monodontidae ANCESTRAL SPECIES 9 ENSGT00940000162839.a ENSGT00390000013749 ENSGT00940000156434 ENSGT00940000158012.b ENSGT00670000098059.k.b ENSGT00940000157158.d ENSGT00390000009194.b ENSGT00940000157225 ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000153464.B.j ##22 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000155694 ENSGT00390000014069.a.h Narwhal MODERN SPECIES 307 ENSMMNG00015020185 TMEM192 (ENSMMNG00015020171) KLHL2 (ENSMMNG00015020081) MSMO1 (ENSMMNG00015020022) ENSMMNG00015019999 CPE (ENSMMNG00015019964) ENSMMNG00015019945 TLL1 (ENSMMNG00015019817) RBM46 (ENSMMNG00015019749) LRAT (ENSMMNG00015019719) FGG (ENSMMNG00015019685) ENSMMNG00015019607 FGB (ENSMMNG00015019560) PLRG1 (ENSMMNG00015019530) DCHS2 (ENSMMNG00015019454) ENSMMNG00015019414 ##22 SFRP2 (ENSMMNG00015019388) RNF175 (ENSMMNG00015019342) TLR2 (ENSMMNG00015019314) TMEM131L (ENSMMNG00015019219) MND1 (ENSMMNG00015019145) TRIM2 (ENSMMNG00015019031) FHDC1 (ENSMMNG00015018979) ARFIP1 (ENSMMNG00015018903) TMEM154 (ENSMMNG00015018865) FBXW7 (ENSMMNG00015018727) GATB (ENSMMNG00015018644) FHIP1A (ENSMMNG00015018610) ENSMMNG00015018587 SH3D19 (ENSMMNG00015018299) ENSMMNG00015018175 Sperm whale MODERN SPECIES 18 SULT1E1 (ENSPCTG00005000668) CSN1S1 (ENSPCTG00005000469) CSN2 (ENSPCTG00005000412) ODAM (ENSPCTG00005000374) CSN3 (ENSPCTG00005000327) NPY2R (ENSPCTG00005000316) MAP9 (ENSPCTG00005000301) RBM46 (ENSPCTG00005003497) LRAT (ENSPCTG00005003476) FGG (ENSPCTG00005003449) ENSPCTG00005003385 ENSPCTG00005003357 FGB (ENSPCTG00005003335) PLRG1 (ENSPCTG00005003321) DCHS2 (ENSPCTG00005003286) ENSPCTG00005003270 ##22 SFRP2 (ENSPCTG00005003256) TLR2 (ENSPCTG00005003249) TMEM131L (ENSPCTG00005003230) TRIM2 (ENSPCTG00005003026) TIGD4 (ENSPCTG00005002959) ARFIP1 (ENSPCTG00005002925) ENSPCTG00005002902 TMEM154 (ENSPCTG00005002881) ENSPCTG00005002861 FBXW7 (ENSPCTG00005002824) GATB (ENSPCTG00005002750) FHIP1A (ENSPCTG00005002716) PRSS48 (ENSPCTG00005002685) SH3D19 (ENSPCTG00005002589) ENSPCTG00005002537 Blue whale MODERN SPECIES 16 ENSBMSG00010001708 TMEM192 (ENSBMSG00010001694) KLHL2 (ENSBMSG00010001582) MSMO1 (ENSBMSG00010001541) ENSBMSG00010001535 CPE (ENSBMSG00010001524) ENSBMSG00010001516 TLL1 (ENSBMSG00010001481) ENSBMSG00010001435 ENSBMSG00010001409 FGG (ENSBMSG00010001380) ENSBMSG00010001358 FGB (ENSBMSG00010001327) PLRG1 (ENSBMSG00010001300) DCHS2 (ENSBMSG00010001251) ENSBMSG00010001222 ##22 SFRP2 (ENSBMSG00010001204) TLR2 (ENSBMSG00010001186) TMEM131L (ENSBMSG00010001155) MND1 (ENSBMSG00010001093) TRIM2 (ENSBMSG00010001046) FHDC1 (ENSBMSG00010001001) ARFIP1 (ENSBMSG00010000954) TMEM154 (ENSBMSG00010000916) ENSBMSG00010000895 FBXW7 (ENSBMSG00010000836) GATB (ENSBMSG00010000775) FHIP1A (ENSBMSG00010000741) PRSS48 (ENSBMSG00010000700) ENSBMSG00010000685 SH3D19 (ENSBMSG00010000484) Pecora ANCESTRAL SPECIES 5 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00390000009268.db.b ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Percora_a ANCESTRAL SPECIES 13 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00390000009268.db.b ENSGT00960000190232 ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Bovidae ANCESTRAL SPECIES 5 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00960000190232 ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Bovinae ANCESTRAL SPECIES 4 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00390000002517.a.b.a.g.a.b ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Bos ANCESTRAL SPECIES 5 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00390000002517.a.b.a.g.a.b ENSGT00940000168009 ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00390000011179.o.a ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556.ib ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Bos_a ANCESTRAL SPECIES 6 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000153117.B.c.a ENSGT00940000168009 ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00390000011179.o.a ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556.ib ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Domestic yak MODERN SPECIES 28 USP34 (ENSBGRG00000007924) XPO1 (ENSBGRG00000008764) ENSBGRG00000008927 FAM161A (ENSBGRG00000008971) CCT4 (ENSBGRG00000009171) COMMD1 (ENSBGRG00000009496) B3GNT2 (ENSBGRG00000009630) EHBP1 (ENSBGRG00000009676) TMEM17 (ENSBGRG00000009894) ENSBGRG00000009929 OTX1 (ENSBGRG00000009943) WDPCP (ENSBGRG00000009982) MRPS24 (ENSBGRG00000010129) MDH1 (ENSBGRG00000010198) ENSBGRG00000010353 UGP2 (ENSBGRG00000010367) ##22 VPS54 (ENSBGRG00000010687) PELI1 (ENSBGRG00000011236) ENSBGRG00000011374 AFTPH (ENSBGRG00000011500) SERTAD2 (ENSBGRG00000011678) SLC1A4 (ENSBGRG00000011713) CEP68 (ENSBGRG00000011823) RAB1A (ENSBGRG00000012081) ACTR2 (ENSBGRG00000012280) SPRED2 (ENSBGRG00000012585) MEIS1 (ENSBGRG00000012913) ENSBGRG00000013128 ETAA1 (ENSBGRG00000013146) ENSBGRG00000013266 C1D (ENSBGRG00000013288) Wild yak MODERN SPECIES 1264 ENSBMUG00000022282 MDH1 (ENSBMUG00000022250) UGP2 (ENSBMUG00000022200) ##22 VPS54 (ENSBMUG00000022132) PELI1 (ENSBMUG00000022066) Bos_b ANCESTRAL SPECIES 16 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00390000002517.a.b.a.g.a.b ENSGT00940000168009 ENSGT00940000157824 ENSGT01000000221758 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00390000011179.o.a ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556.ib ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Cow MODERN SPECIES 2 XPO1 (ENSBTAG00000013254) ENSBTAG00000048424 ENSBTAG00000039218 ENSBTAG00000051819 FAM161A (ENSBTAG00000009290) ENSBTAG00000049111 CCT4 (ENSBTAG00000004531) COMMD1 (ENSBTAG00000019867) B3GNT2 (ENSBTAG00000018046) TMEM17 (ENSBTAG00000000899) EHBP1 (ENSBTAG00000044173) OTX1 (ENSBTAG00000006760) WDPCP (ENSBTAG00000005151) ENSBTAG00000023318 MDH1 (ENSBTAG00000019295) UGP2 (ENSBTAG00000000111) ##22 VPS54 (ENSBTAG00000000115) PELI1 (ENSBTAG00000020865) ENSBTAG00000053585 LGALSL (ENSBTAG00000055296) AFTPH (ENSBTAG00000009299) SERTAD2 (ENSBTAG00000049341) ENSBTAG00000050435 SLC1A4 (ENSBTAG00000007763) CEP68 (ENSBTAG00000016717) RAB1A (ENSBTAG00000016720) ACTR2 (ENSBTAG00000009761) SPRED2 (ENSBTAG00000019456) MEIS1 (ENSBTAG00000008448) ETAA1 (ENSBTAG00000011727) C1D (ENSBTAG00000049002) Hybrid Bos Indicus MODERN SPECIES 2 ENSBIXG00005009556 ENSBIXG00005009538 ENSBIXG00005009523 FAM161A (ENSBIXG00005009510) ENSBIXG00005006710 CCT4 (ENSBIXG00005009489) COMMD1 (ENSBIXG00005009417) B3GNT2 (ENSBIXG00005005908) TMEM17 (ENSBIXG00005000490) EHBP1 (ENSBIXG00005000484) ENSBIXG00005005799 OTX1 (ENSBIXG00005009282) WDPCP (ENSBIXG00005009244) MRPS24 (ENSBIXG00005000425) MDH1 (ENSBIXG00005009206) UGP2 (ENSBIXG00005009159) ##22 VPS54 (ENSBIXG00005009062) PELI1 (ENSBIXG00005008978) ENSBIXG00005008944 AFTPH (ENSBIXG00005008912) SERTAD2 (ENSBIXG00005008870) RAB1A (ENSBIXG00005000282) ENSBIXG00005008797 SLC1A4 (ENSBIXG00005008778) CEP68 (ENSBIXG00005006085) ACTR2 (ENSBIXG00005008678) SPRED2 (ENSBIXG00005000234) MEIS1 (ENSBIXG00005000216) ETAA1 (ENSBIXG00005008485) C1D (ENSBIXG00005000197) DNAAF10 (ENSBIXG00005008434) American bison MODERN SPECIES 3346 ENSBBBG00000016446 USP34 (ENSBBBG00000004065) XPO1 (ENSBBBG00000016353) ENSBBBG00000016280 ENSBBBG00000016270 FAM161A (ENSBBBG00000016265) CCT4 (ENSBBBG00000016241) COMMD1 (ENSBBBG00000016189) B3GNT2 (ENSBBBG00000000770) ENSBBBG00000016179 TMEM17 (ENSBBBG00000016175) EHBP1 (ENSBBBG00000016143) OTX1 (ENSBBBG00000015949) WDPCP (ENSBBBG00000015935) MDH1 (ENSBBBG00000015910) UGP2 (ENSBBBG00000015846) ##22 VPS54 (ENSBBBG00000015810) PELI1 (ENSBBBG00000015700) LGALSL (ENSBBBG00000003917) AFTPH (ENSBBBG00000015672) SLC1A4 (ENSBBBG00000003906) CEP68 (ENSBBBG00000015639) RAB1A (ENSBBBG00000015620) ENSBBBG00000003899 SPRED2 (ENSBBBG00000003896) MEIS1 (ENSBBBG00000000788) Caprinae ANCESTRAL SPECIES 9 ENSGT00940000154909 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00960000190232 ENSGT00940000157824 ENSGT00550000074956.w ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.i ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337.h ENSGT00940000154186.a ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Goat MODERN SPECIES 2 ENSCHIG00000025266 C2orf74 (ENSCHIG00000015008) ENSCHIG00000022308 USP34 (ENSCHIG00000015071) XPO1 (ENSCHIG00000018132) ENSCHIG00000024725 FAM161A (ENSCHIG00000013966) ENSCHIG00000014125 COMMD1 (ENSCHIG00000017790) B3GNT2 (ENSCHIG00000009561) TMEM17 (ENSCHIG00000012499) EHBP1 (ENSCHIG00000013762) OTX1 (ENSCHIG00000017955) WDPCP (ENSCHIG00000018963) ENSCHIG00000015525 UGP2 (ENSCHIG00000021810) ##22 VPS54 (ENSCHIG00000010990) ENSCHIG00000003100 PELI1 (ENSCHIG00000022027) LGALSL (ENSCHIG00000026638) AFTPH (ENSCHIG00000009404) ENSCHIG00000007620 SLC1A4 (ENSCHIG00000025336) CEP68 (ENSCHIG00000025433) RAB1A (ENSCHIG00000014060) ACTR2 (ENSCHIG00000014272) ENSCHIG00000027162 SPRED2 (ENSCHIG00000013086) MEIS1 (ENSCHIG00000027207) ETAA1 (ENSCHIG00000027011) C1D (ENSCHIG00000025729) Rambouillet Sheep MODERN SPECIES 19 C2orf74 (ENSOARG00020002212) ENSOARG00020002186 USP34 (ENSOARG00020001682) XPO1 (ENSOARG00020001587) ENSOARG00020001558 ENSOARG00020001550 FAM161A (ENSOARG00020001502) ENSOARG00020001479 COMMD1 (ENSOARG00020001461) B3GNT2 (ENSOARG00020001451) TMEM17 (ENSOARG00020001441) EHBP1 (ENSOARG00020001291) OTX1 (ENSOARG00020001249) WDPCP (ENSOARG00020001233) MDH1 (ENSOARG00020001156) UGP2 (ENSOARG00020001100) ##22 VPS54 (ENSOARG00020000984) ENSOARG00020000952 PELI1 (ENSOARG00020000937) LGALSL (ENSOARG00020000922) SERTAD2 (ENSOARG00020000894) ENSOARG00020000886 SLC1A4 (ENSOARG00020000870) RAB1A (ENSOARG00020000781) ENSOARG00020000747 ACTR2 (ENSOARG00020000701) SPRED2 (ENSOARG00020000634) ENSOARG00020000610 MEIS1 (ENSOARG00020000528) ETAA1 (ENSOARG00020000471) C1D (ENSOARG00020000448) Siberian musk deer MODERN SPECIES 240 ENSMMSG00000009275 USP34 (ENSMMSG00000008868) XPO1 (ENSMMSG00000008749) ENSMMSG00000008648 ENSMMSG00000008623 FAM161A (ENSMMSG00000008531) ENSMMSG00000008359 COMMD1 (ENSMMSG00000008325) B3GNT2 (ENSMMSG00000008312) ENSMMSG00000008292 TMEM17 (ENSMMSG00000008258) EHBP1 (ENSMMSG00000008127) OTX1 (ENSMMSG00000008093) WDPCP (ENSMMSG00000008007) MDH1 (ENSMMSG00000007784) UGP2 (ENSMMSG00000007620) ##22 VPS54 (ENSMMSG00000007345) PELI1 (ENSMMSG00000007255) LGALSL (ENSMMSG00000007219) AFTPH (ENSMMSG00000007162) SERTAD2 (ENSMMSG00000007146) ENSMMSG00000007124 SLC1A4 (ENSMMSG00000007010) CEP68 (ENSMMSG00000006928) RAB1A (ENSMMSG00000006809) ENSMMSG00000006773 ACTR2 (ENSMMSG00000006727) SPRED2 (ENSMMSG00000006652) MEIS1 (ENSMMSG00000006369) ETAA1 (ENSMMSG00000006322) ENSMMSG00000006311 Yarkand deer MODERN SPECIES 2 ENSCHYG00000005607 XPO1 (ENSCHYG00000005634) ENSCHYG00000005745 FAM161A (ENSCHYG00000005790) ENSCHYG00000005899 CCT4 (ENSCHYG00000005956) COMMD1 (ENSCHYG00000006201) B3GNT2 (ENSCHYG00000006215) TMEM17 (ENSCHYG00000006260) EHBP1 (ENSCHYG00000006348) OTX1 (ENSCHYG00000006734) WDPCP (ENSCHYG00000006760) ENSCHYG00000006867 MDH1 (ENSCHYG00000006887) ENSCHYG00000007056 UGP2 (ENSCHYG00000007083) ##22 VPS54 (ENSCHYG00000007200) ENSCHYG00000007473 PELI1 (ENSCHYG00000007493) ENSCHYG00000007544 LGALSL (ENSCHYG00000007576) AFTPH (ENSCHYG00000007630) ENSCHYG00000007734 SERTAD2 (ENSCHYG00000007769) ENSCHYG00000007790 SLC1A4 (ENSCHYG00000007819) CEP68 (ENSCHYG00000007916) RAB1A (ENSCHYG00000007988) ACTR2 (ENSCHYG00000008112) SPRED2 (ENSCHYG00000008346) ENSCHYG00000008453 Camelidae ANCESTRAL SPECIES 12 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Arabian camel MODERN SPECIES 6 ENSCDRG00005004233 ENSCDRG00005004251 ENSCDRG00005004262 USP34 (ENSCDRG00005004329) XPO1 (ENSCDRG00005004581) FAM161A (ENSCDRG00005004663) CCT4 (ENSCDRG00005004760) COMMD1 (ENSCDRG00005004907) B3GNT2 (ENSCDRG00005004917) TMEM17 (ENSCDRG00005004930) ENSCDRG00005004963 EHBP1 (ENSCDRG00005004989) OTX1 (ENSCDRG00005005204) WDPCP (ENSCDRG00005005228) MDH1 (ENSCDRG00005005489) UGP2 (ENSCDRG00005005735) ##22 VPS54 (ENSCDRG00005005842) PELI1 (ENSCDRG00005006069) LGALSL (ENSCDRG00005006106) AFTPH (ENSCDRG00005006174) SLC1A4 (ENSCDRG00005006273) CEP68 (ENSCDRG00005006344) RAB1A (ENSCDRG00005006403) ACTR2 (ENSCDRG00005006571) SPRED2 (ENSCDRG00005006696) MEIS1 (ENSCDRG00005006803) ENSCDRG00005007509 ETAA1 (ENSCDRG00005007526) C1D (ENSCDRG00005007559) DNAAF10 (ENSCDRG00005007600) PNO1 (ENSCDRG00005007641) Alpaca MODERN SPECIES 1898 FAM161A (ENSVPAG00000012466) CCT4 (ENSVPAG00000012467) COMMD1 (ENSVPAG00000012468) B3GNT2 (ENSVPAG00000012470) TMEM17 (ENSVPAG00000012471) EHBP1 (ENSVPAG00000012472) WDPCP (ENSVPAG00000012475) MDH1 (ENSVPAG00000012476) UGP2 (ENSVPAG00000012477) ##22 VPS54 (ENSVPAG00000012479) PELI1 (ENSVPAG00000012484) Eulipotyphla ANCESTRAL SPECIES 981 ENSGT00940000153464.B ##22 ENSGT00390000000583 Hedgehog MODERN SPECIES 8749 ENSEEUG00000004321 ##22 VPS54 (ENSEEUG00000004536) Common shrew MODERN SPECIES 5045 UGP2 (ENSSARG00000007663) ##22 VPS54 (ENSSARG00000007688) Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Primates ANCESTRAL SPECIES 14 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00390000003682.ib.a ENSGT00940000156327 ENSGT00390000009597 Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.g.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Lemuriformes ANCESTRAL SPECIES 19 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.g.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Lemuriformes_a ANCESTRAL SPECIES 52 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.g.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Coquerels sifaka MODERN SPECIES 157 SANBR (ENSPCOG00000016045) C2orf74 (ENSPCOG00000019501) ENSPCOG00000019004 ENSPCOG00000014897 USP34 (ENSPCOG00000019384) ENSPCOG00000026732 XPO1 (ENSPCOG00000023123) FAM161A (ENSPCOG00000025568) CCT4 (ENSPCOG00000024760) COMMD1 (ENSPCOG00000002593) TMEM17 (ENSPCOG00000003689) EHBP1 (ENSPCOG00000013807) OTX1 (ENSPCOG00000007128) WDPCP (ENSPCOG00000021207) ENSPCOG00000022476 UGP2 (ENSPCOG00000021592) ##22 VPS54 (ENSPCOG00000021532) PELI1 (ENSPCOG00000016939) LGALSL (ENSPCOG00000024215) AFTPH (ENSPCOG00000015597) ENSPCOG00000014082 SLC1A4 (ENSPCOG00000008394) CEP68 (ENSPCOG00000017947) RAB1A (ENSPCOG00000017244) ACTR2 (ENSPCOG00000025808) SPRED2 (ENSPCOG00000021475) ENSPCOG00000003824 ENSPCOG00000017120 MEIS1 (ENSPCOG00000026417) Greater bamboo lemur MODERN SPECIES 748 EHBP1 (ENSPSMG00000004151) OTX1 (ENSPSMG00000004137) WDPCP (ENSPSMG00000004066) ENSPSMG00000003961 UGP2 (ENSPSMG00000003903) ##22 VPS54 (ENSPSMG00000003489) PELI1 (ENSPSMG00000003310) DENND5B (ENSPSMG00000003278) ETFBKMT (ENSPSMG00000003252) ENSPSMG00000003245 ENSPSMG00000003238 ENSPSMG00000003229 RESF1 (ENSPSMG00000003227) BICD1 (ENSPSMG00000003186) Mouse lemur MODERN SPECIES 26 ENSMICG00000034983 ENSMICG00000044675 ENSMICG00000007130 USP34 (ENSMICG00000007137) XPO1 (ENSMICG00000027770) FAM161A (ENSMICG00000032665) ENSMICG00000015263 COMMD1 (ENSMICG00000036432) TMEM17 (ENSMICG00000045940) ENSMICG00000035187 EHBP1 (ENSMICG00000011224) ENSMICG00000036558 OTX1 (ENSMICG00000032707) WDPCP (ENSMICG00000017077) ENSMICG00000015195 UGP2 (ENSMICG00000006509) ##22 VPS54 (ENSMICG00000035608) PELI1 (ENSMICG00000044746) LGALSL (ENSMICG00000031755) AFTPH (ENSMICG00000037342) ENSMICG00000044806 ENSMICG00000041471 SLC1A4 (ENSMICG00000012577) CEP68 (ENSMICG00000037255) RAB1A (ENSMICG00000012587) ENSMICG00000036415 SPRED2 (ENSMICG00000006435) MEIS1 (ENSMICG00000017054) ETAA1 (ENSMICG00000033585) C1D (ENSMICG00000032141) DNAAF10 (ENSMICG00000010876) Bushbaby MODERN SPECIES 139 PEX13 (ENSOGAG00000032082) SANBR (ENSOGAG00000013736) C2orf74 (ENSOGAG00000033349) ENSOGAG00000012906 USP34 (ENSOGAG00000012908) XPO1 (ENSOGAG00000000143) FAM161A (ENSOGAG00000024144) CCT4 (ENSOGAG00000003974) COMMD1 (ENSOGAG00000029292) ENSOGAG00000028774 TMEM17 (ENSOGAG00000015014) EHBP1 (ENSOGAG00000005236) OTX1 (ENSOGAG00000027686) WDPCP (ENSOGAG00000026615) ENSOGAG00000014487 UGP2 (ENSOGAG00000013975) ##22 VPS54 (ENSOGAG00000013980) PELI1 (ENSOGAG00000013984) LGALSL (ENSOGAG00000007901) ENSOGAG00000011268 SERTAD2 (ENSOGAG00000011272) SLC1A4 (ENSOGAG00000005682) CEP68 (ENSOGAG00000005687) RAB1A (ENSOGAG00000026181) ENSOGAG00000005688 Haplorrhini ANCESTRAL SPECIES 15 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Tarsier MODERN SPECIES 1667 ENSTSYG00000028864 UGP2 (ENSTSYG00000014248) ##22 Simiiformes ANCESTRAL SPECIES 14 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00390000003682.ib.a.a.b ENSGT00940000156327 ENSGT00390000009597 Platyrrhini ANCESTRAL SPECIES 13 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029.h ENSGT00940000155345.m ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h.a.b ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a.a.a ENSGT00950000183050.b.b.a.a.b ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154277.a.b.a.b ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00390000003682.ib.a.a.b.a Cebidae ANCESTRAL SPECIES 15 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029.h ENSGT00940000155345.m ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h.a.b ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a.a.b ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154277.a.b.a.b ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156327 Cebidae_a ANCESTRAL SPECIES 30 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00900000141074.e.b.a ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029.h ENSGT00940000155345.m ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h.a.b.b ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a.a.b ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154277.a.b.a.b ENSGT00940000154556 ENSGT00910000147214 ENSGT00940000156841 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156327 ENSGT00390000009597 Capuchin MODERN SPECIES 23 ENSCCAG00000023277 FAM161A (ENSCCAG00000032868) CCT4 (ENSCCAG00000036910) ENSCCAG00000014874 COMMD1 (ENSCCAG00000021063) B3GNT2 (ENSCCAG00000004376) TMEM17 (ENSCCAG00000033287) EHBP1 (ENSCCAG00000022934) OTX1 (ENSCCAG00000037783) WDPCP (ENSCCAG00000026603) ENSCCAG00000032985 UGP2 (ENSCCAG00000038081) ##22 VPS54 (ENSCCAG00000037148) ENSCCAG00000033895 LGALSL (ENSCCAG00000035879) ENSCCAG00000030319 AFTPH (ENSCCAG00000022631) ENSCCAG00000032655 SLC1A4 (ENSCCAG00000022825) ENSCCAG00000037790 CEP68 (ENSCCAG00000022595) RAB1A (ENSCCAG00000021869) ENSCCAG00000038117 ENSCCAG00000021773 ACTR2 (ENSCCAG00000030047) SPRED2 (ENSCCAG00000035702) MEIS1 (ENSCCAG00000020640) Bolivian squirrel monkey MODERN SPECIES 48 C2orf74 (ENSSBOG00000026818) ENSSBOG00000029475 USP34 (ENSSBOG00000034202) ENSSBOG00000020979 XPO1 (ENSSBOG00000034467) ENSSBOG00000010136 FAM161A (ENSSBOG00000034089) CCT4 (ENSSBOG00000026025) COMMD1 (ENSSBOG00000032499) ENSSBOG00000019927 TMEM17 (ENSSBOG00000026954) EHBP1 (ENSSBOG00000027993) OTX1 (ENSSBOG00000030274) WDPCP (ENSSBOG00000020988) ENSSBOG00000035941 UGP2 (ENSSBOG00000035973) ##22 VPS54 (ENSSBOG00000034598) PELI1 (ENSSBOG00000001340) LGALSL (ENSSBOG00000029775) ENSSBOG00000019039 AFTPH (ENSSBOG00000027803) SLC1A4 (ENSSBOG00000023405) CEP68 (ENSSBOG00000033296) RAB1A (ENSSBOG00000023732) ENSSBOG00000031295 ENSSBOG00000018757 ENSSBOG00000024339 ACTR2 (ENSSBOG00000028028) SPRED2 (ENSSBOG00000000156) ENSSBOG00000018908 MEIS1 (ENSSBOG00000000062) Marmoset MODERN SPECIES 5 C2orf74 (ENSCJAG00000042078) USP34 (ENSCJAG00000044195) XPO1 (ENSCJAG00000008877) FAM161A (ENSCJAG00000008852) CCT4 (ENSCJAG00000008703) ENSCJAG00000060745 COMMD1 (ENSCJAG00000008693) B3GNT2 (ENSCJAG00000046682) TMEM17 (ENSCJAG00000045778) ENSCJAG00000077815 EHBP1 (ENSCJAG00000008586) OTX1 (ENSCJAG00000083222) ENSCJAG00000075756 WDPCP (ENSCJAG00000007061) ENSCJAG00000007018 UGP2 (ENSCJAG00000006960) ##22 VPS54 (ENSCJAG00000006914) PELI1 (ENSCJAG00000006889) ENSCJAG00000070703 ENSCJAG00000006878 ENSCJAG00000046867 AFTPH (ENSCJAG00000006819) SERTAD2 (ENSCJAG00000006818) ENSCJAG00000074553 ENSCJAG00000074052 SLC1A4 (ENSCJAG00000006795) CEP68 (ENSCJAG00000006788) ENSCJAG00000072263 ENSCJAG00000074307 ENSCJAG00000046275 ACTR2 (ENSCJAG00000006722) Mas night monkey MODERN SPECIES 655 FAM161A (ENSANAG00000033665) CCT4 (ENSANAG00000036567) COMMD1 (ENSANAG00000030463) ENSANAG00000018780 ENSANAG00000036675 ENSANAG00000036898 ENSANAG00000019382 ENSANAG00000024280 TMEM17 (ENSANAG00000023395) EHBP1 (ENSANAG00000022884) OTX1 (ENSANAG00000032160) WDPCP (ENSANAG00000033928) ENSANAG00000029892 ENSANAG00000038114 ENSANAG00000019559 UGP2 (ENSANAG00000035096) ##22 VPS54 (ENSANAG00000021718) ENSANAG00000029544 ENSANAG00000026716 LGALSL (ENSANAG00000035714) AFTPH (ENSANAG00000033138) ENSANAG00000025925 SLC1A4 (ENSANAG00000034703) CEP68 (ENSANAG00000035796) RAB1A (ENSANAG00000020929) ENSANAG00000038454 ACTR2 (ENSANAG00000038066) ENSANAG00000020597 SPRED2 (ENSANAG00000024110) Catarrhini ANCESTRAL SPECIES 17 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405.s Hominoidea ANCESTRAL SPECIES 18 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00950000182901.a.a.a.b.b ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 Hominidae ANCESTRAL SPECIES 19 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00950000183099.u.a.d.b.c.a.b.b ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00950000182901.a.a.a.b.b ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00950000183099.u.a.d.b.c.a.b.b ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00390000010721.a.a.a.b ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00950000182901.a.a.a.b.b ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a.a.a ENSGT00910000147214 ENSGT00940000154556.tb.a.b ENSGT00940000156841 ENSGT00940000156327 Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00390000010721.a.a.a.b ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a.a.a ENSGT00910000147214 ENSGT00940000154556.tb.a.b ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 Pan ANCESTRAL SPECIES 17 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00390000010721.a.a.a.b ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a.a.a ENSGT00910000147214 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405.s.a Chimpanzee MODERN SPECIES 14 ENSPTRG00000050629 USP34 (ENSPTRG00000011959) XPO1 (ENSPTRG00000011962) FAM161A (ENSPTRG00000011964) CCT4 (ENSPTRG00000011965) COMMD1 (ENSPTRG00000011966) ENSPTRG00000045695 B3GNT2 (ENSPTRG00000051560) TMEM17 (ENSPTRG00000011968) EHBP1 (ENSPTRG00000011969) OTX1 (ENSPTRG00000011972) WDPCP (ENSPTRG00000024270) MDH1 (ENSPTRG00000011974) ENSPTRG00000046466 ENSPTRG00000048626 UGP2 (ENSPTRG00000011976) ##22 VPS54 (ENSPTRG00000011978) PELI1 (ENSPTRG00000023869) LGALSL (ENSPTRG00000047293) AFTPH (ENSPTRG00000011983) ENSPTRG00000045952 SERTAD2 (ENSPTRG00000030469) SLC1A4 (ENSPTRG00000011985) CEP68 (ENSPTRG00000011988) RAB1A (ENSPTRG00000011989) ENSPTRG00000011990 ENSPTRG00000047998 SPRED2 (ENSPTRG00000011992) MEIS1 (ENSPTRG00000011994) ETAA1 (ENSPTRG00000011996) C1D (ENSPTRG00000023558) Bonobo MODERN SPECIES 14 C2orf74 (ENSPPAG00000027440) ENSPPAG00000038853 ENSPPAG00000040060 USP34 (ENSPPAG00000031846) XPO1 (ENSPPAG00000029699) FAM161A (ENSPPAG00000037442) CCT4 (ENSPPAG00000036821) COMMD1 (ENSPPAG00000043574) B3GNT2 (ENSPPAG00000024510) TMEM17 (ENSPPAG00000011687) EHBP1 (ENSPPAG00000043965) OTX1 (ENSPPAG00000028464) WDPCP (ENSPPAG00000032819) MDH1 (ENSPPAG00000042469) ENSPPAG00000032238 UGP2 (ENSPPAG00000038898) ##22 VPS54 (ENSPPAG00000028874) PELI1 (ENSPPAG00000044117) LGALSL (ENSPPAG00000039473) AFTPH (ENSPPAG00000028223) ENSPPAG00000031785 SERTAD2 (ENSPPAG00000033136) SLC1A4 (ENSPPAG00000041051) CEP68 (ENSPPAG00000026445) RAB1A (ENSPPAG00000030253) ENSPPAG00000030634 ENSPPAG00000026570 SPRED2 (ENSPPAG00000042240) ENSPPAG00000037169 ETAA1 (ENSPPAG00000034986) ENSPPAG00000037847 Human MODERN SPECIES 11 PUS10 (ENSG00000162927) PEX13 (ENSG00000162928) SANBR (ENSG00000162929) C2orf74 (ENSG00000237651) USP34 (ENSG00000115464) XPO1 (ENSG00000082898) FAM161A (ENSG00000170264) CCT4 (ENSG00000115484) COMMD1 (ENSG00000173163) B3GNT2 (ENSG00000170340) TMEM17 (ENSG00000186889) EHBP1 (ENSG00000115504) OTX1 (ENSG00000115507) WDPCP (ENSG00000143951) MDH1 (ENSG00000014641) UGP2 (ENSG00000169764) ##22 VPS54 (ENSG00000143952) PELI1 (ENSG00000197329) LGALSL (ENSG00000119862) AFTPH (ENSG00000119844) SERTAD2 (ENSG00000179833) SLC1A4 (ENSG00000115902) CEP68 (ENSG00000011523) RAB1A (ENSG00000138069) ACTR2 (ENSG00000138071) SPRED2 (ENSG00000198369) MEIS1 (ENSG00000143995) ETAA1 (ENSG00000143971) C1D (ENSG00000197223) DNAAF10 (ENSG00000243667) PNO1 (ENSG00000115946) Gorilla MODERN SPECIES 14 ENSGGOG00000014565 ENSGGOG00000037807 USP34 (ENSGGOG00000014575) XPO1 (ENSGGOG00000034878) FAM161A (ENSGGOG00000013942) CCT4 (ENSGGOG00000007003) COMMD1 (ENSGGOG00000007602) RPSA (ENSGGOG00000026707) B3GNT2 (ENSGGOG00000025266) ENSGGOG00000038261 EHBP1 (ENSGGOG00000034917) OTX1 (ENSGGOG00000015410) WDPCP (ENSGGOG00000011930) MDH1 (ENSGGOG00000007085) ENSGGOG00000036456 UGP2 (ENSGGOG00000006283) ##22 VPS54 (ENSGGOG00000006294) PELI1 (ENSGGOG00000013460) ENSGGOG00000022216 LGALSL (ENSGGOG00000006386) ENSGGOG00000023155 AFTPH (ENSGGOG00000008449) SLC1A4 (ENSGGOG00000011211) CEP68 (ENSGGOG00000005826) RAB1A (ENSGGOG00000026603) ENSGGOG00000008505 ENSGGOG00000041600 SPRED2 (ENSGGOG00000007267) ENSGGOG00000005446 ETAA1 (ENSGGOG00000014411) ENSGGOG00000025982 Orangutan MODERN SPECIES 14 C2orf74 (ENSPPYG00000035727) ENSPPYG00000036113 USP34 (ENSPPYG00000012384) XPO1 (ENSPPYG00000012383) FAM161A (ENSPPYG00000012382) CCT4 (ENSPPYG00000012381) COMMD1 (ENSPPYG00000012380) ENSPPYG00000019018 B3GNT2 (ENSPPYG00000012379) TMEM17 (ENSPPYG00000012378) EHBP1 (ENSPPYG00000012377) ENSPPYG00000030010 OTX1 (ENSPPYG00000012376) WDPCP (ENSPPYG00000012374) MDH1 (ENSPPYG00000012373) UGP2 (ENSPPYG00000012371) ##22 VPS54 (ENSPPYG00000012370) PELI1 (ENSPPYG00000012369) LGALSL (ENSPPYG00000012366) ENSPPYG00000012365 AFTPH (ENSPPYG00000012364) SERTAD2 (ENSPPYG00000035823) SLC1A4 (ENSPPYG00000041756) CEP68 (ENSPPYG00000012361) RAB1A (ENSPPYG00000012360) ACTR2 (ENSPPYG00000012359) SPRED2 (ENSPPYG00000012358) ENSPPYG00000012356 ETAA1 (ENSPPYG00000012355) C1D (ENSPPYG00000012354) DNAAF10 (ENSPPYG00000012352) Gibbon MODERN SPECIES 4 ENSNLEG00000034163 ENSNLEG00000027829 USP34 (ENSNLEG00000009598) XPO1 (ENSNLEG00000009680) FAM161A (ENSNLEG00000009719) CCT4 (ENSNLEG00000009723) COMMD1 (ENSNLEG00000033234) B3GNT2 (ENSNLEG00000035442) TMEM17 (ENSNLEG00000009759) EHBP1 (ENSNLEG00000009764) ENSNLEG00000027460 OTX1 (ENSNLEG00000009808) WDPCP (ENSNLEG00000009810) MDH1 (ENSNLEG00000009823) ENSNLEG00000035245 UGP2 (ENSNLEG00000031494) ##22 VPS54 (ENSNLEG00000009859) PELI1 (ENSNLEG00000009891) ENSNLEG00000028443 LGALSL (ENSNLEG00000031680) AFTPH (ENSNLEG00000009902) ENSNLEG00000009923 SERTAD2 (ENSNLEG00000029151) SLC1A4 (ENSNLEG00000009927) ENSNLEG00000009939 RAB1A (ENSNLEG00000009944) ACTR2 (ENSNLEG00000009948) SPRED2 (ENSNLEG00000009959) ENSNLEG00000027615 ENSNLEG00000009963 ETAA1 (ENSNLEG00000009972) Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154958.mb ENSGT00940000154556.tb.a ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154958.mb ENSGT00940000154556.tb.a ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405.s Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000155590.g.b ENSGT00940000156327 ENSGT00390000009597 Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000155590.g.b ENSGT00940000156327 ENSGT00390000009597 Olive baboon MODERN SPECIES 5 ENSPANG00000016913 USP34 (ENSPANG00000025375) XPO1 (ENSPANG00000006892) FAM161A (ENSPANG00000010259) CCT4 (ENSPANG00000019105) COMMD1 (ENSPANG00000006093) B3GNT2 (ENSPANG00000007808) ENSPANG00000051251 TMEM17 (ENSPANG00000042367) EHBP1 (ENSPANG00000016912) OTX1 (ENSPANG00000038245) WDPCP (ENSPANG00000019775) ENSPANG00000044221 ENSPANG00000006332 MDH1 (ENSPANG00000014437) UGP2 (ENSPANG00000020689) ##22 VPS54 (ENSPANG00000022299) PELI1 (ENSPANG00000008630) LGALSL (ENSPANG00000007113) AFTPH (ENSPANG00000019355) ENSPANG00000033862 SERTAD2 (ENSPANG00000021214) SLC1A4 (ENSPANG00000025917) CEP68 (ENSPANG00000009710) RAB1A (ENSPANG00000010485) ACTR2 (ENSPANG00000007073) SPRED2 (ENSPANG00000015698) ENSPANG00000049032 MEIS1 (ENSPANG00000008059) ETAA1 (ENSPANG00000007449) C1D (ENSPANG00000002886) Cercopithecinae_d ANCESTRAL SPECIES 32 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.a ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000155590.g.b ENSGT00940000156327 ENSGT00390000009597 Sooty mangabey MODERN SPECIES 494 ENSCATG00000038823 USP34 (ENSCATG00000042180) ENSCATG00000013431 XPO1 (ENSCATG00000032674) FAM161A (ENSCATG00000043996) CCT4 (ENSCATG00000038933) ENSCATG00000038149 COMMD1 (ENSCATG00000011551) B3GNT2 (ENSCATG00000011785) TMEM17 (ENSCATG00000038173) EHBP1 (ENSCATG00000030805) OTX1 (ENSCATG00000031998) WDPCP (ENSCATG00000043458) MDH1 (ENSCATG00000030537) ENSCATG00000010001 UGP2 (ENSCATG00000038117) ##22 VPS54 (ENSCATG00000000035) PELI1 (ENSCATG00000031456) LGALSL (ENSCATG00000029852) AFTPH (ENSCATG00000032038) ENSCATG00000045350 SERTAD2 (ENSCATG00000012102) SLC1A4 (ENSCATG00000036187) CEP68 (ENSCATG00000032378) RAB1A (ENSCATG00000030853) ACTR2 (ENSCATG00000036025) SPRED2 (ENSCATG00000034117) ENSCATG00000045181 ENSCATG00000012177 MEIS1 (ENSCATG00000030958) ETAA1 (ENSCATG00000036073) Drill MODERN SPECIES 951 ENSMLEG00000028334 ENSMLEG00000036543 ENSMLEG00000029346 USP34 (ENSMLEG00000040976) XPO1 (ENSMLEG00000032004) FAM161A (ENSMLEG00000038057) CCT4 (ENSMLEG00000037693) ENSMLEG00000044216 COMMD1 (ENSMLEG00000042809) B3GNT2 (ENSMLEG00000008417) TMEM17 (ENSMLEG00000040238) EHBP1 (ENSMLEG00000031553) OTX1 (ENSMLEG00000029765) WDPCP (ENSMLEG00000040899) MDH1 (ENSMLEG00000029382) UGP2 (ENSMLEG00000038204) ##22 VPS54 (ENSMLEG00000034933) PELI1 (ENSMLEG00000028248) Macaca ANCESTRAL SPECIES 17 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a ENSGT00940000154556.tb.a ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000155590.g.b ENSGT00940000156327 ENSGT00390000009597 Macaca_a ANCESTRAL SPECIES 15 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.b.a.a.a.b.b ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958.lb.a.a ENSGT00940000154556.tb.a ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405.s.c ENSGT00950000183091.A.b Rhesus MODERN SPECIES 4 XPO1 (ENSMMUG00000006941) ENSMMUG00000059978 ENSMMUG00000056178 ENSMMUG00000063300 FAM161A (ENSMMUG00000013972) CCT4 (ENSMMUG00000013973) COMMD1 (ENSMMUG00000030824) B3GNT2 (ENSMMUG00000014181) TMEM17 (ENSMMUG00000057986) EHBP1 (ENSMMUG00000016668) OTX1 (ENSMMUG00000051405) ENSMMUG00000030822 WDPCP (ENSMMUG00000003979) MDH1 (ENSMMUG00000006163) ENSMMUG00000060943 UGP2 (ENSMMUG00000008770) ##22 VPS54 (ENSMMUG00000008772) PELI1 (ENSMMUG00000059267) LGALSL (ENSMMUG00000064711) ENSMMUG00000006504 AFTPH (ENSMMUG00000006503) ENSMMUG00000014862 SERTAD2 (ENSMMUG00000047067) SLC1A4 (ENSMMUG00000010279) CEP68 (ENSMMUG00000017019) RAB1A (ENSMMUG00000021721) ACTR2 (ENSMMUG00000002263) SPRED2 (ENSMMUG00000044784) MEIS1 (ENSMMUG00000011216) ENSMMUG00000049443 ETAA1 (ENSMMUG00000062156) Crab-eating macaque MODERN SPECIES 4 ENSMFAG00000063382 FAM161A (ENSMFAG00000028707) CCT4 (ENSMFAG00000031348) ENSMFAG00000056305 ENSMFAG00000016016 COMMD1 (ENSMFAG00000043104) B3GNT2 (ENSMFAG00000029481) TMEM17 (ENSMFAG00000063543) EHBP1 (ENSMFAG00000043351) OTX1 (ENSMFAG00000031554) ENSMFAG00000030175 WDPCP (ENSMFAG00000033390) MDH1 (ENSMFAG00000042090) ENSMFAG00000059450 ENSMFAG00000056658 UGP2 (ENSMFAG00000035944) ##22 VPS54 (ENSMFAG00000042525) PELI1 (ENSMFAG00000045683) ENSMFAG00000054126 ENSMFAG00000031922 ENSMFAG00000035379 AFTPH (ENSMFAG00000041331) ENSMFAG00000002213 ENSMFAG00000061518 SERTAD2 (ENSMFAG00000037664) ENSMFAG00000062833 ENSMFAG00000053049 SLC1A4 (ENSMFAG00000003847) CEP68 (ENSMFAG00000041409) ENSMFAG00000049291 ENSMFAG00000064674 Pig-tailed macaque MODERN SPECIES 341 ENSMNEG00000042228 ENSMNEG00000036948 ENSMNEG00000036676 USP34 (ENSMNEG00000039067) XPO1 (ENSMNEG00000030909) FAM161A (ENSMNEG00000031037) CCT4 (ENSMNEG00000044353) COMMD1 (ENSMNEG00000024928) B3GNT2 (ENSMNEG00000025770) TMEM17 (ENSMNEG00000040952) ENSMNEG00000038346 EHBP1 (ENSMNEG00000043070) OTX1 (ENSMNEG00000044308) WDPCP (ENSMNEG00000030809) MDH1 (ENSMNEG00000039034) UGP2 (ENSMNEG00000038452) ##22 VPS54 (ENSMNEG00000031281) PELI1 (ENSMNEG00000030553) LGALSL (ENSMNEG00000029755) AFTPH (ENSMNEG00000040816) ENSMNEG00000025227 SERTAD2 (ENSMNEG00000008861) ENSMNEG00000006388 SLC1A4 (ENSMNEG00000004689) CEP68 (ENSMNEG00000032212) ENSMNEG00000042121 ACTR2 (ENSMNEG00000044163) SPRED2 (ENSMNEG00000028343) ENSMNEG00000004414 ENSMNEG00000023818 MEIS1 (ENSMNEG00000037352) Vervet Monkey MODERN SPECIES 5 C2orf74 (ENSCSAG00000014493) ENSCSAG00000014516 USP34 (ENSCSAG00000014580) XPO1 (ENSCSAG00000014606) FAM161A (ENSCSAG00000014628) CCT4 (ENSCSAG00000014640) COMMD1 (ENSCSAG00000014646) B3GNT2 (ENSCSAG00000019448) ENSCSAG00000019447 TMEM17 (ENSCSAG00000014653) EHBP1 (ENSCSAG00000014669) OTX1 (ENSCSAG00000014675) ENSCSAG00000019446 WDPCP (ENSCSAG00000014684) MDH1 (ENSCSAG00000014691) UGP2 (ENSCSAG00000014697) ##22 VPS54 (ENSCSAG00000014705) PELI1 (ENSCSAG00000014710) LGALSL (ENSCSAG00000014717) AFTPH (ENSCSAG00000014726) SERTAD2 (ENSCSAG00000019445) ENSCSAG00000019444 SLC1A4 (ENSCSAG00000014735) CEP68 (ENSCSAG00000014763) ENSCSAG00000014775 ACTR2 (ENSCSAG00000014779) SPRED2 (ENSCSAG00000014788) MEIS1 (ENSCSAG00000014795) ETAA1 (ENSCSAG00000014804) C1D (ENSCSAG00000014811) DNAAF10 (ENSCSAG00000014819) Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 689 ENSGT00950000182995.e.a.a.a.bb.b ENSGT00390000016551 ENSGT00530000063410.a.h ENSGT00940000153464.B.k ##22 ENSGT00390000000583 Black snub-nosed monkey MODERN SPECIES 1729 P2RY13 (ENSRBIG00000023248) GPR87 (ENSRBIG00000039704) P2RY14 (ENSRBIG00000035874) MED12L (ENSRBIG00000039843) CLRN1 (ENSRBIG00000041768) MINDY4B (ENSRBIG00000037902) SIAH2 (ENSRBIG00000036211) ENSRBIG00000045017 ERICH6 (ENSRBIG00000003994) SELENOT (ENSRBIG00000020675) EIF2A (ENSRBIG00000038363) SERP1 (ENSRBIG00000025186) TSC22D2 (ENSRBIG00000038912) WDPCP (ENSRBIG00000040890) MDH1 (ENSRBIG00000041138) UGP2 (ENSRBIG00000043487) ##22 VPS54 (ENSRBIG00000003075) Golden snub-nosed monkey MODERN SPECIES 2291 UGP2 (ENSRROG00000043535) ##22 ENSRROG00000035217 VPS54 (ENSRROG00000036114) Rhinopithecus ANCESTRAL SPECIES ENSGT00940000153464.B.l ##22 Black snub-nosed monkey MODERN SPECIES 758 ENSRBIG00000042221 ##22 Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00960000190724 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Tree shrew MODERN SPECIES 1699 ENSTBEG00000011268 UGP2 (ENSTBEG00000012087) ##22 VPS54 (ENSTBEG00000012432) PELI1 (ENSTBEG00000013015) Glires ANCESTRAL SPECIES 13 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00960000190724 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Lagomorpha ANCESTRAL SPECIES 10 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824.c ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556.lb.a ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Rabbit DUPLICATION Rabbit MODERN SPECIES 11 SANBR (ENSOCUG00000009559) C2orf74 (ENSOCUG00000029395) ENSOCUG00000017817 USP34 (ENSOCUG00000017819) XPO1 (ENSOCUG00000004986) ENSOCUG00000000707 CCT4 (ENSOCUG00000024386) COMMD1 (ENSOCUG00000001093) B3GNT2 (ENSOCUG00000017281) TMEM17 (ENSOCUG00000010487) ENSOCUG00000037865 EHBP1 (ENSOCUG00000013563) OTX1 (ENSOCUG00000021773) WDPCP (ENSOCUG00000006156) MDH1 (ENSOCUG00000006166) ENSOCUG00000002137 ##22 VPS54 (ENSOCUG00000002143) PELI1 (ENSOCUG00000027961) ENSOCUG00000031191 LGALSL (ENSOCUG00000013957) AFTPH (ENSOCUG00000006390) SERTAD2 (ENSOCUG00000008192) ENSOCUG00000010821 CEP68 (ENSOCUG00000016996) RAB1A (ENSOCUG00000017003) ACTR2 (ENSOCUG00000004906) SPRED2 (ENSOCUG00000004913) ENSOCUG00000034052 MEIS1 (ENSOCUG00000001842) ETAA1 (ENSOCUG00000001812) ENSOCUG00000009771 Rabbit MODERN SPECIES 6 METTL14 (ENSOCUG00000003062) SEC24D (ENSOCUG00000013272) SYNPO2 (ENSOCUG00000008953) MYOZ2 (ENSOCUG00000008959) USP53 (ENSOCUG00000013733) ENSOCUG00000030903 FABP2 (ENSOCUG00000003293) PDE5A (ENSOCUG00000009417) MAD2L1 (ENSOCUG00000008243) PRDM5 (ENSOCUG00000013454) ENSOCUG00000036546 NDNF (ENSOCUG00000002038) TNIP3 (ENSOCUG00000001973) QRFPR (ENSOCUG00000000563) ENSOCUG00000016694 ENSOCUG00000007852 ##22 ANXA5 (ENSOCUG00000017760) SMIM43 (ENSOCUG00000038273) EXOSC9 (ENSOCUG00000003046) ENSOCUG00000028042 BBS7 (ENSOCUG00000003053) ENSOCUG00000036368 ENSOCUG00000034627 ENSOCUG00000030634 ENSOCUG00000031507 TRPC3 (ENSOCUG00000009487) BLTP1 (ENSOCUG00000014811) ADAD1 (ENSOCUG00000012989) IL-2 (ENSOCUG00000010100) IL21 (ENSOCUG00000015304) ENSOCUG00000022164 Pika MODERN SPECIES 3261 ENSOPRG00000016162 UGP2 (ENSOPRG00000016189) ##22 VPS54 (ENSOPRG00000016199) Rodentia ANCESTRAL SPECIES 15 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00960000190724 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Kangaroo rat MODERN SPECIES 382 Usp34 (ENSDORG00000012062) Xpo1 (ENSDORG00000013050) ENSDORG00000026102 Cct4 (ENSDORG00000002542) Commd1 (ENSDORG00000001166) ENSDORG00000027292 B3gnt2 (ENSDORG00000024683) Tmem17 (ENSDORG00000024954) Ehbp1 (ENSDORG00000002628) ENSDORG00000023858 Otx1 (ENSDORG00000024553) Wdpcp (ENSDORG00000003329) ENSDORG00000009021 Mdh1 (ENSDORG00000000099) Rasl2-9 (ENSDORG00000027038) Ugp2 (ENSDORG00000013164) ##22 Vps54 (ENSDORG00000009782) Peli1 (ENSDORG00000025404) ENSDORG00000027919 ENSDORG00000004159 ENSDORG00000027058 Sertad2 (ENSDORG00000025954) Slc1a4 (ENSDORG00000002394) Cep68 (ENSDORG00000002111) ENSDORG00000028628 Actr2 (ENSDORG00000001487) Spred2 (ENSDORG00000012174) Meis1 (ENSDORG00000008334) C1d (ENSDORG00000003300) Dnaaf10 (ENSDORG00000006862) ENSDORG00000006867 Myomorpha ANCESTRAL SPECIES 24 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Lesser Egyptian jerboa MODERN SPECIES 74 Strn (ENSJJAG00000022124) Vit (ENSJJAG00000000898) Fez2 (ENSJJAG00000024083) Crim1 (ENSJJAG00000006651) Fam98a (ENSJJAG00000012732) Rasgrp3 (ENSJJAG00000021552) ENSJJAG00000003107 Commd1 (ENSJJAG00000006007) B3gnt2 (ENSJJAG00000007561) Tmem17 (ENSJJAG00000007029) Ehbp1 (ENSJJAG00000023917) Otx1 (ENSJJAG00000011287) ENSJJAG00000015148 ENSJJAG00000014833 Mdh1 (ENSJJAG00000024369) Ugp2 (ENSJJAG00000014432) ##22 Vps54 (ENSJJAG00000012401) Peli1 (ENSJJAG00000000296) Gm5065 (ENSJJAG00000016772) ENSJJAG00000020384 Sertad2 (ENSJJAG00000015989) Slc1a4 (ENSJJAG00000002418) Cep68 (ENSJJAG00000016421) Rab1a (ENSJJAG00000014396) Actr2 (ENSJJAG00000008642) Spred2 (ENSJJAG00000020977) Meis1 (ENSJJAG00000015459) ENSJJAG00000011226 ENSJJAG00000021064 ENSJJAG00000023186 Dnaaf10 (ENSJJAG00000019935) Muroidea ANCESTRAL SPECIES 21 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Muroidea_A ANCESTRAL SPECIES 13 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Cricetidae ANCESTRAL SPECIES 14 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Cricetinae ANCESTRAL SPECIES 37 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 639 ENSMAUG00000007138 1700093K21Rik (ENSMAUG00000002621) Ahsa2 (ENSMAUG00000019192) Usp34 (ENSMAUG00000015413) Xpo1 (ENSMAUG00000006769) ENSMAUG00000012775 Cct4 (ENSMAUG00000000518) Commd1 (ENSMAUG00000010569) B3gnt2 (ENSMAUG00000002963) Tmem17 (ENSMAUG00000003448) Ehbp1 (ENSMAUG00000000935) Otx1 (ENSMAUG00000019114) Wdpcp (ENSMAUG00000011349) ENSMAUG00000012018 Mdh1 (ENSMAUG00000018086) ENSMAUG00000012689 ##22 Vps54 (ENSMAUG00000010788) Peli1 (ENSMAUG00000012937) ENSMAUG00000015033 Aftph (ENSMAUG00000016557) Sertad2 (ENSMAUG00000004242) Slc1a4 (ENSMAUG00000019775) Cep68 (ENSMAUG00000014820) Rab1a (ENSMAUG00000012156) Actr2 (ENSMAUG00000008458) Spred2 (ENSMAUG00000013657) Meis1 (ENSMAUG00000001130) Etaa1 (ENSMAUG00000010594) C1d (ENSMAUG00000008974) Dnaaf10 (ENSMAUG00000011603) Pno1 (ENSMAUG00000014995) Golden Hamster MODERN SPECIES 753 Arl15 (ENSMAUG00000008167) Ndufs4 (ENSMAUG00000008411) Fst (ENSMAUG00000008573) ENSMAUG00000008668 Itga2 (ENSMAUG00000008103) ENSMAUG00000009756 Pelo (ENSMAUG00000009770) Isl1 (ENSMAUG00000009787) ENSMAUG00000010697 ##22 Parp8 (ENSMAUG00000012024) Emb (ENSMAUG00000010613) Hcn1 (ENSMAUG00000011222) ENSMAUG00000012705 ENSMAUG00000013225 Mrps30 (ENSMAUG00000013462) ENSMAUG00000011648 Fgf10 (ENSMAUG00000012052) ENSMAUG00000013640 Paip1 (ENSMAUG00000014688) 4833420G17Rik (ENSMAUG00000000141) Tmem267 (ENSMAUG00000015637) Ccl28 (ENSMAUG00000018511) Hmgcs1 (ENSMAUG00000000052) Nim1k (ENSMAUG00000017026) Chinese hamster chok1gshd MODERN SPECIES 121 Ahsa2 (ENSCGRG00001004669) Usp34 (ENSCGRG00001006322) Xpo1 (ENSCGRG00001000263) ENSCGRG00001013463 Cct4 (ENSCGRG00001016718) ENSCGRG00001007132 Commd1 (ENSCGRG00001007842) B3gnt2 (ENSCGRG00001005196) ENSCGRG00001025059 Tmem17 (ENSCGRG00001024384) Ehbp1 (ENSCGRG00001022633) Otx1 (ENSCGRG00001017328) Wdpcp (ENSCGRG00001012886) ENSCGRG00001023990 Mdh1 (ENSCGRG00001021102) UGP2 (ENSCGRG00001012845) ##22 Vps54 (ENSCGRG00001009286) Peli1 (ENSCGRG00001021958) Gm5065 (ENSCGRG00001013868) ENSCGRG00001009126 Aftph (ENSCGRG00001016162) Sertad2 (ENSCGRG00001009657) ENSCGRG00001005474 Slc1a4 (ENSCGRG00001017715) Cep68 (ENSCGRG00001014327) ENSCGRG00001012691 ENSCGRG00001017243 Spred2 (ENSCGRG00001015924) Meis1 (ENSCGRG00001009447) Etaa1 (ENSCGRG00001020354) C1d (ENSCGRG00001023376) Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Northern American deer mouse MODERN SPECIES 1 1700093K21Rik (ENSPEMG00000004943) Ahsa2 (ENSPEMG00000008242) Usp34 (ENSPEMG00000013241) Xpo1 (ENSPEMG00000010103) ENSPEMG00000011408 Cct4 (ENSPEMG00000014381) Commd1 (ENSPEMG00000008857) ENSPEMG00000013373 B3gnt2 (ENSPEMG00000030694) ENSPEMG00000029232 Tmem17 (ENSPEMG00000012666) Ehbp1 (ENSPEMG00000014061) Otx1 (ENSPEMG00000027636) Wdpcp (ENSPEMG00000016341) Mdh1 (ENSPEMG00000007456) Ugp2 (ENSPEMG00000010268) ##22 Vps54 (ENSPEMG00000012405) Peli1 (ENSPEMG00000030617) ENSPEMG00000015267 Aftph (ENSPEMG00000010156) Sertad2 (ENSPEMG00000027852) ENSPEMG00000016241 Slc1a4 (ENSPEMG00000018063) Cep68 (ENSPEMG00000002161) Rab1a (ENSPEMG00000009340) ENSPEMG00000025517 Actr2 (ENSPEMG00000015727) Spred2 (ENSPEMG00000029042) ENSPEMG00000028236 ENSPEMG00000012914 Meis1 (ENSPEMG00000008113) Prairie vole MODERN SPECIES 92 ENSMOCG00000011390 1700093K21Rik (ENSMOCG00000014054) ENSMOCG00000017180 Usp34 (ENSMOCG00000002256) Xpo1 (ENSMOCG00000012169) ENSMOCG00000018790 ENSMOCG00000016877 Cct4 (ENSMOCG00000011789) Commd1 (ENSMOCG00000006391) B3gnt2 (ENSMOCG00000000086) Tmem17 (ENSMOCG00000015494) Ehbp1 (ENSMOCG00000007287) Otx1 (ENSMOCG00000014191) Wdpcp (ENSMOCG00000003579) Mdh1 (ENSMOCG00000015448) Ugp2 (ENSMOCG00000009715) ##22 Vps54 (ENSMOCG00000009563) Peli1 (ENSMOCG00000016437) Gm5065 (ENSMOCG00000014300) ENSMOCG00000003932 Aftph (ENSMOCG00000015081) Sertad2 (ENSMOCG00000002173) Slc1a4 (ENSMOCG00000001173) Cep68 (ENSMOCG00000003444) Rab1a (ENSMOCG00000017022) Actr2 (ENSMOCG00000008248) Spred2 (ENSMOCG00000014005) Meis1 (ENSMOCG00000016359) Etaa1 (ENSMOCG00000018537) C1d (ENSMOCG00000010860) Dnaaf10 (ENSMOCG00000000313) Murinae ANCESTRAL SPECIES 12 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052.s Mus ANCESTRAL SPECIES 14 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052.s Mus_A ANCESTRAL SPECIES 2 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052.s Mus_B ANCESTRAL SPECIES 2 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052.s Mouse MODERN SPECIES 2 Sanbr (ENSMUSG00000042208) 1700093K21Rik (ENSMUSG00000020286) Ahsa2 (ENSMUSG00000020288) Usp34 (ENSMUSG00000056342) Xpo1 (ENSMUSG00000020290) Fam161a (ENSMUSG00000049811) Cct4 (ENSMUSG00000007739) Commd1 (ENSMUSG00000051355) Commd1b (ENSMUSG00000098650) B3gnt2 (ENSMUSG00000051650) Tmem17 (ENSMUSG00000049904) Ehbp1 (ENSMUSG00000042302) Otx1 (ENSMUSG00000005917) Wdpcp (ENSMUSG00000020319) Mdh1 (ENSMUSG00000020321) Ugp2 (ENSMUSG00000001891) ##22 Vps54 (ENSMUSG00000020128) Peli1 (ENSMUSG00000020134) Lgalsl (ENSMUSG00000042363) Aftph (ENSMUSG00000049659) Sertad2 (ENSMUSG00000049800) Slc1a4 (ENSMUSG00000020142) Cep68 (ENSMUSG00000044066) Rab1a (ENSMUSG00000020149) Actr2 (ENSMUSG00000020152) Spred2 (ENSMUSG00000045671) Meis1 (ENSMUSG00000020160) Etaa1 (ENSMUSG00000016984) C1d (ENSMUSG00000000581) Pno1 (ENSMUSG00000020116) Dnaaf10 (ENSMUSG00000078970) Mus_C ANCESTRAL SPECIES 3 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00950000183152.A ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052.s spretus MODERN SPECIES 2 Ahsa2 (MGP_SPRETEiJ_G0016981) Usp34 (MGP_SPRETEiJ_G0016980) Xpo1 (MGP_SPRETEiJ_G0016979) MGP_SPRETEiJ_G0016978 Cct4 (MGP_SPRETEiJ_G0016977) MGP_SPRETEiJ_G0016976 Commd1 (MGP_SPRETEiJ_G0016975) MGP_SPRETEiJ_G0016974 B3gnt2 (MGP_SPRETEiJ_G0016973) MGP_SPRETEiJ_G0016972 Tmem17 (MGP_SPRETEiJ_G0016971) Ehbp1 (MGP_SPRETEiJ_G0016970) Otx1 (MGP_SPRETEiJ_G0016969) Wdpcp (MGP_SPRETEiJ_G0016968) Mdh1 (MGP_SPRETEiJ_G0016967) Ugp2 (MGP_SPRETEiJ_G0016966) ##22 Vps54 (MGP_SPRETEiJ_G0016965) Peli1 (MGP_SPRETEiJ_G0016964) Lgalsl (MGP_SPRETEiJ_G0016963) Aftph (MGP_SPRETEiJ_G0016962) Sertad2 (MGP_SPRETEiJ_G0016961) Slc1a4 (MGP_SPRETEiJ_G0016960) Cep68 (MGP_SPRETEiJ_G0016959) Rab1a (MGP_SPRETEiJ_G0016958) Actr2 (MGP_SPRETEiJ_G0016957) Spred2 (MGP_SPRETEiJ_G0016956) Asb12 (MGP_SPRETEiJ_G0016955) Meis1 (MGP_SPRETEiJ_G0016954) Etaa1 (MGP_SPRETEiJ_G0016953) C1d (MGP_SPRETEiJ_G0016952) Pno1 (MGP_SPRETEiJ_G0016951) Steppe mouse MODERN SPECIES 2568 Ugp2 (ENSMSIG00000014630) ##22 ENSMSIG00000014612 Vps54 (ENSMSIG00000014517) ENSMSIG00000014505 Peli1 (ENSMSIG00000014472) Lgalsl (ENSMSIG00000014448) Ryukyu mouse MODERN SPECIES 2 Ahsa2 (MGP_CAROLIEiJ_G0016138) Usp34 (MGP_CAROLIEiJ_G0016137) Xpo1 (MGP_CAROLIEiJ_G0016136) MGP_CAROLIEiJ_G0016135 Cct4 (MGP_CAROLIEiJ_G0016134) MGP_CAROLIEiJ_G0016133 MGP_CAROLIEiJ_G0016132 B3gnt2 (MGP_CAROLIEiJ_G0016131) MGP_CAROLIEiJ_G0016130 MGP_CAROLIEiJ_G0016129 Tmem17 (MGP_CAROLIEiJ_G0016128) Ehbp1 (MGP_CAROLIEiJ_G0016127) Otx1 (MGP_CAROLIEiJ_G0016126) Wdpcp (MGP_CAROLIEiJ_G0016125) Mdh1 (MGP_CAROLIEiJ_G0016124) Ugp2 (MGP_CAROLIEiJ_G0016123) ##22 Vps54 (MGP_CAROLIEiJ_G0016122) Peli1 (MGP_CAROLIEiJ_G0016121) Gm5065 (MGP_CAROLIEiJ_G0016120) Aftph (MGP_CAROLIEiJ_G0016119) Sertad2 (MGP_CAROLIEiJ_G0016118) Slc1a4 (MGP_CAROLIEiJ_G0016117) Cep68 (MGP_CAROLIEiJ_G0016116) Rab1a (MGP_CAROLIEiJ_G0016115) Actr2 (MGP_CAROLIEiJ_G0016114) Spred2 (MGP_CAROLIEiJ_G0016113) Meis1 (MGP_CAROLIEiJ_G0016112) Etaa1 (MGP_CAROLIEiJ_G0016111) C1d (MGP_CAROLIEiJ_G0016110) Pno1 (MGP_CAROLIEiJ_G0016109) Dnaaf10 (MGP_CAROLIEiJ_G0016108) Shrew mouse MODERN SPECIES 4 Ahsa2 (MGP_PahariEiJ_G0016752) MGP_PahariEiJ_G0016753 Xpo1 (MGP_PahariEiJ_G0016754) MGP_PahariEiJ_G0016755 Cct4 (MGP_PahariEiJ_G0016756) Commd1 (MGP_PahariEiJ_G0016757) MGP_PahariEiJ_G0016758 MGP_PahariEiJ_G0016759 B3gnt2 (MGP_PahariEiJ_G0016760) MGP_PahariEiJ_G0016761 Tmem17 (MGP_PahariEiJ_G0016762) Ehbp1 (MGP_PahariEiJ_G0016763) Otx1 (MGP_PahariEiJ_G0016764) MGP_PahariEiJ_G0016765 Mdh1 (MGP_PahariEiJ_G0016766) Ugp2 (MGP_PahariEiJ_G0016767) ##22 Vps54 (MGP_PahariEiJ_G0016768) Peli1 (MGP_PahariEiJ_G0016769) MGP_PahariEiJ_G0016770 Lgalsl (MGP_PahariEiJ_G0016771) Aftph (MGP_PahariEiJ_G0016772) Sertad2 (MGP_PahariEiJ_G0016773) Slc1a4 (MGP_PahariEiJ_G0016774) Cep68 (MGP_PahariEiJ_G0016775) Rab1a (MGP_PahariEiJ_G0016776) Actr2 (MGP_PahariEiJ_G0016777) Spred2 (MGP_PahariEiJ_G0016778) Meis1 (MGP_PahariEiJ_G0016779) Etaa1 (MGP_PahariEiJ_G0016780) C1d (MGP_PahariEiJ_G0016781) Dnaaf10 (MGP_PahariEiJ_G0016782) Rat MODERN SPECIES 5 Usp34 (ENSRNOG00000051889) Xpo1 (ENSRNOG00000009935) Fam161a (ENSRNOG00000009881) Cct4 (ENSRNOG00000009642) Zrsr2-ps1 (ENSRNOG00000009639) Commd1 (ENSRNOG00000009281) B3gnt2 (ENSRNOG00000009267) LOC100361636 (ENSRNOG00000033346) AABR07016623.1 (ENSRNOG00000009240) Tmem17 (ENSRNOG00000009220) Ehbp1 (ENSRNOG00000008917) Otx1 (ENSRNOG00000065081) ENSRNOG00000065408 Wdpcp (ENSRNOG00000054331) Mdh1 (ENSRNOG00000008103) Ugp2 (ENSRNOG00000008079) ##22 Vps54 (ENSRNOG00000007125) Peli1 (ENSRNOG00000006329) LOC108352809 (ENSRNOG00000042277) Lgalsl (ENSRNOG00000005464) LOC108352861 (ENSRNOG00000029052) Aftph (ENSRNOG00000005411) Sertad2 (ENSRNOG00000005393) Slc1a4 (ENSRNOG00000005248) Cep68 (ENSRNOG00000027282) Rab1a (ENSRNOG00000004992) Rpl38 (ENSRNOG00000033686) ENSRNOG00000070133 AABR07016566.1 (ENSRNOG00000051648) Actr2 (ENSRNOG00000004959) Spred2 (ENSRNOG00000004888) Upper Galilee mountains blind mole rat MODERN SPECIES 1542 Ehbp1 (ENSNGAG00000022543) Otx1 (ENSNGAG00000023167) Wdpcp (ENSNGAG00000022039) ENSNGAG00000016412 Mdh1 (ENSNGAG00000022959) Ugp2 (ENSNGAG00000014716) ##22 Vps54 (ENSNGAG00000019724) Peli1 (ENSNGAG00000014256) ENSNGAG00000017298 Aftph (ENSNGAG00000022259) ENSNGAG00000010686 Sertad2 (ENSNGAG00000019290) Slc1a4 (ENSNGAG00000022015) Cep68 (ENSNGAG00000024137) Rab1a (ENSNGAG00000005838) Rodentia_A ANCESTRAL SPECIES 14 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00960000190724 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.f ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.f ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Guinea pig MODERN SPECIES 48 PEX13 (ENSCPOG00000034678) SANBR (ENSCPOG00000004783) ENSCPOG00000004791 USP34 (ENSCPOG00000004796) XPO1 (ENSCPOG00000034053) FAM161A (ENSCPOG00000002085) CCT4 (ENSCPOG00000002086) COMMD1 (ENSCPOG00000002088) B3GNT2 (ENSCPOG00000034379) TMEM17 (ENSCPOG00000035038) EHBP1 (ENSCPOG00000002001) OTX1 (ENSCPOG00000004881) ENSCPOG00000030520 ENSCPOG00000036317 MDH1 (ENSCPOG00000010755) UGP2 (ENSCPOG00000008459) ##22 VPS54 (ENSCPOG00000037738) PELI1 (ENSCPOG00000037199) LGALSL (ENSCPOG00000039657) ENSCPOG00000033401 SLC1A4 (ENSCPOG00000008754) CEP68 (ENSCPOG00000001592) RAB1A (ENSCPOG00000015437) ACTR2 (ENSCPOG00000025808) SPRED2 (ENSCPOG00000037272) Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178.g ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.f ENSGT00940000154958.y ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 57 ENSODEG00000008576 CPS1 (ENSODEG00000007917) ENSODEG00000008980 ENSODEG00000013776 ERBB4 (ENSODEG00000009033) IKZF2 (ENSODEG00000008010) ENSODEG00000008509 ENSODEG00000008353 ENSODEG00000007901 VWC2L (ENSODEG00000008549) ENSODEG00000009279 ENSODEG00000008221 ABCA12 (ENSODEG00000012235) ENSODEG00000008301 FN1 (ENSODEG00000008281) ENSODEG00000007722 ##22 ENSODEG00000007771 ENSODEG00000007346 Degu MODERN SPECIES 127 ENSODEG00000005143 ENSODEG00000005132 FOXG1 (ENSODEG00000005094) ENSODEG00000019116 ENSODEG00000005027 PRKD1 (ENSODEG00000004844) ENSODEG00000004710 ##22 G2E3 (ENSODEG00000004806) SCFD1 (ENSODEG00000004638) COCH (ENSODEG00000004531) STRN3 (ENSODEG00000004497) ENSODEG00000004725 HECTD1 (ENSODEG00000004383) ENSODEG00000019035 HEATR5A (ENSODEG00000003991) ENSODEG00000003834 ENSODEG00000003785 NUBPL (ENSODEG00000008332) ENSODEG00000008269 ENSODEG00000008253 ARHGAP5 (ENSODEG00000008123) AKAP6 (ENSODEG00000008112) Degu MODERN SPECIES 119 ENSODEG00000011239 ENSODEG00000012087 ENSODEG00000012263 ENSODEG00000011618 ENSODEG00000011341 B3GNT2 (ENSODEG00000011165) ENSODEG00000011529 EHBP1 (ENSODEG00000012259) OTX1 (ENSODEG00000012071) ENSODEG00000011160 ENSODEG00000011103 ENSODEG00000019821 WDPCP (ENSODEG00000011330) MDH1 (ENSODEG00000011582) ENSODEG00000012736 ENSODEG00000011552 ##22 VPS54 (ENSODEG00000012541) PELI1 (ENSODEG00000011189) ENSODEG00000011901 LGALSL (ENSODEG00000011485) ENSODEG00000011805 SERTAD2 (ENSODEG00000011523) SLC1A4 (ENSODEG00000011406) ENSODEG00000011248 ENSODEG00000010956 SPRED2 (ENSODEG00000012243) ENSODEG00000012312 MEIS1 (ENSODEG00000012314) ENSODEG00000011242 ENSODEG00000019812 ENSODEG00000011043 Degu MODERN SPECIES 206 CNGB3 (ENSODEG00000002187) CPNE3 (ENSODEG00000002152) RMDN1 (ENSODEG00000002107) WWP1 (ENSODEG00000002080) SLC7A13 (ENSODEG00000002051) ATP6V0D2 (ENSODEG00000004115) ENSODEG00000004094 ##22 CA2 (ENSODEG00000004074) CA3 (ENSODEG00000004062) CA1 (ENSODEG00000004037) CA13 (ENSODEG00000004003) ENSODEG00000003981 E2F5 (ENSODEG00000003935) LRRCC1 (ENSODEG00000001103) RALYL (ENSODEG00000001012) ENSODEG00000000938 ENSODEG00000000923 SNX16 (ENSODEG00000000903) CHMP4C (ENSODEG00000000862) ZFAND1 (ENSODEG00000000821) ENSODEG00000000784 FABP12 (ENSODEG00000000763) Degu MODERN SPECIES 115 DIPK1A (ENSODEG00000006544) ENSODEG00000019282 MTF2 (ENSODEG00000005685) TMED5 (ENSODEG00000005461) ENSODEG00000004565 CCDC18 (ENSODEG00000005096) ENSODEG00000019300 DR1 (ENSODEG00000006106) ENSODEG00000019219 ENSODEG00000019152 FNBP1L (ENSODEG00000006211) ENSODEG00000006845 ENSODEG00000006568 ENSODEG00000004740 ENSODEG00000004546 ENSODEG00000005598 ##22 ENSODEG00000005234 GCLM (ENSODEG00000005056) ABCA4 (ENSODEG00000005171) ARHGAP29 (ENSODEG00000004849) ENSODEG00000007973 ABCD3 (ENSODEG00000007534) F3 (ENSODEG00000004515) SLC44A3 (ENSODEG00000004662) ENSODEG00000006162 ALG14 (ENSODEG00000005834) TLCD4 (ENSODEG00000005267) ENSODEG00000005174 ENSODEG00000007142 ENSODEG00000007079 PTBP2 (ENSODEG00000005497) Long-tailed chinchilla MODERN SPECIES 131 PUS10 (ENSCLAG00000011001) PEX13 (ENSCLAG00000015482) SANBR (ENSCLAG00000009068) ENSCLAG00000007857 USP34 (ENSCLAG00000010299) XPO1 (ENSCLAG00000012953) FAM161A (ENSCLAG00000011652) CCT4 (ENSCLAG00000014321) COMMD1 (ENSCLAG00000013262) B3GNT2 (ENSCLAG00000013147) TMEM17 (ENSCLAG00000013487) EHBP1 (ENSCLAG00000007561) OTX1 (ENSCLAG00000010265) ENSCLAG00000008400 MDH1 (ENSCLAG00000007815) UGP2 (ENSCLAG00000010416) ##22 VPS54 (ENSCLAG00000007366) PELI1 (ENSCLAG00000006481) LGALSL (ENSCLAG00000015114) ENSCLAG00000012344 AFTPH (ENSCLAG00000012032) SERTAD2 (ENSCLAG00000008318) SLC1A4 (ENSCLAG00000008207) CEP68 (ENSCLAG00000012193) RAB1A (ENSCLAG00000014766) ACTR2 (ENSCLAG00000010920) SPRED2 (ENSCLAG00000011449) MEIS1 (ENSCLAG00000010420) ETAA1 (ENSCLAG00000013575) C1D (ENSCLAG00000011883) DNAAF10 (ENSCLAG00000014702) Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000019983 XPO1 (ENSHGLG00000003115) FAM161A (ENSHGLG00000003066) ENSHGLG00000033740 ENSHGLG00000002885 ENSHGLG00000046505 ENSHGLG00000035774 ENSHGLG00000008287 TMEM17 (ENSHGLG00000007663) EHBP1 (ENSHGLG00000007334) OTX1 (ENSHGLG00000007005) ENSHGLG00000039651 WDPCP (ENSHGLG00000005902) ENSHGLG00000034790 MDH1 (ENSHGLG00000033109) UGP2 (ENSHGLG00000005211) ##22 VPS54 (ENSHGLG00000004813) ENSHGLG00000033380 PELI1 (ENSHGLG00000033688) ENSHGLG00000035846 ENSHGLG00000004286 ENSHGLG00000004348 ENSHGLG00000047996 ENSHGLG00000049432 SLC1A4 (ENSHGLG00000036619) ENSHGLG00000048375 CEP68 (ENSHGLG00000018361) RAB1A (ENSHGLG00000045077) ENSHGLG00000037092 ENSHGLG00000042711 ENSHGLG00000034618 Sciuridae ANCESTRAL SPECIES 16 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00960000190724 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Marmotini ANCESTRAL SPECIES 14 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00960000190724 ENSGT00940000156841 ENSGT00940000154431.e.a.f ENSGT00940000156327 ENSGT00390000009597 Alpin marmot MODERN SPECIES 6 C2orf74 (ENSMMMG00000006827) ENSMMMG00000006820 USP34 (ENSMMMG00000006722) XPO1 (ENSMMMG00000006603) ENSMMMG00000006598 ENSMMMG00000006583 CCT4 (ENSMMMG00000006543) ENSMMMG00000006529 B3GNT2 (ENSMMMG00000006495) TMEM17 (ENSMMMG00000006473) EHBP1 (ENSMMMG00000006363) OTX1 (ENSMMMG00000006353) WDPCP (ENSMMMG00000006330) MDH1 (ENSMMMG00000006303) ENSMMMG00000006286 UGP2 (ENSMMMG00000006263) ##22 VPS54 (ENSMMMG00000006188) PELI1 (ENSMMMG00000006175) LGALSL (ENSMMMG00000006152) AFTPH (ENSMMMG00000006097) ENSMMMG00000006048 ENSMMMG00000006042 SLC1A4 (ENSMMMG00000006026) CEP68 (ENSMMMG00000005980) RAB1A (ENSMMMG00000005929) ACTR2 (ENSMMMG00000005910) ENSMMMG00000005906 SPRED2 (ENSMMMG00000005882) ENSMMMG00000005873 ENSMMMG00000005870 MEIS1 (ENSMMMG00000005763) Marmotini_b ANCESTRAL SPECIES 44 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000154451.s ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029.m ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00960000190724 ENSGT00940000156841 ENSGT00940000154431.e.a.f ENSGT00940000156327 ENSGT00390000009597 Squirrel MODERN SPECIES 91 ENSSTOG00000007718 USP34 (ENSSTOG00000007744) ENSSTOG00000020670 XPO1 (ENSSTOG00000016122) ENSSTOG00000028618 FAM161A (ENSSTOG00000026146) CCT4 (ENSSTOG00000014911) COMMD1 (ENSSTOG00000015062) B3GNT2 (ENSSTOG00000015068) TMEM17 (ENSSTOG00000009462) EHBP1 (ENSSTOG00000020225) OTX1 (ENSSTOG00000025219) WDPCP (ENSSTOG00000014213) MDH1 (ENSSTOG00000014227) ENSSTOG00000023912 UGP2 (ENSSTOG00000000789) ##22 VPS54 (ENSSTOG00000023517) PELI1 (ENSSTOG00000026315) LGALSL (ENSSTOG00000024204) AFTPH (ENSSTOG00000020828) ENSSTOG00000030042 SERTAD2 (ENSSTOG00000008454) SLC1A4 (ENSSTOG00000025160) CEP68 (ENSSTOG00000011479) ENSSTOG00000020693 ACTR2 (ENSSTOG00000012608) SPRED2 (ENSSTOG00000022318) ENSSTOG00000024155 MEIS1 (ENSSTOG00000009914) ETAA1 (ENSSTOG00000027144) C1D (ENSSTOG00000012346) Arctic ground squirrel MODERN SPECIES 47 SANBR (ENSUPAG00010011475) C2orf74 (ENSUPAG00010011464) ENSUPAG00010011445 USP34 (ENSUPAG00010011360) XPO1 (ENSUPAG00010011307) ENSUPAG00010011301 FAM161A (ENSUPAG00010011296) CCT4 (ENSUPAG00010011275) ENSUPAG00010011263 B3GNT2 (ENSUPAG00010011255) TMEM17 (ENSUPAG00010011243) EHBP1 (ENSUPAG00010011097) OTX1 (ENSUPAG00010011094) WDPCP (ENSUPAG00010011061) MDH1 (ENSUPAG00010011052) UGP2 (ENSUPAG00010011000) ##22 VPS54 (ENSUPAG00010010962) PELI1 (ENSUPAG00010010945) LGALSL (ENSUPAG00010010929) AFTPH (ENSUPAG00010010843) SERTAD2 (ENSUPAG00010010839) ENSUPAG00010010837 SLC1A4 (ENSUPAG00010010829) CEP68 (ENSUPAG00010010822) RAB1A (ENSUPAG00010010773) ACTR2 (ENSUPAG00010010750) ENSUPAG00010010742 SPRED2 (ENSUPAG00010010724) ENSUPAG00010010722 ENSUPAG00010010713 MEIS1 (ENSUPAG00010010695) Eurasian red squirrel MODERN SPECIES 5 XPO1 (ENSSVLG00005023207) ENSSVLG00005023491 ENSSVLG00005023117 ENSSVLG00005023092 FAM161A (ENSSVLG00005023008) CCT4 (ENSSVLG00005022942) CRIPT (ENSSVLG00005022896) ENSSVLG00005022859 ENSSVLG00005022821 B3GNT2 (ENSSVLG00005022804) TMEM17 (ENSSVLG00005022771) EHBP1 (ENSSVLG00005022645) OTX1 (ENSSVLG00005022587) WDPCP (ENSSVLG00005022261) MDH1 (ENSSVLG00005022103) UGP2 (ENSSVLG00005021917) ##22 VPS54 (ENSSVLG00005021631) PELI1 (ENSSVLG00005021561) LGALSL (ENSSVLG00005021478) ENSSVLG00005021416 SERTAD2 (ENSSVLG00005021387) SLC1A4 (ENSSVLG00005021330) ENSSVLG00005021277 ENSSVLG00005021243 ENSSVLG00005021194 TMSB10 (ENSSVLG00005021149) ENSSVLG00005021102 DNAH6 (ENSSVLG00005019791) SUCLG1 (ENSSVLG00005019152) ENSSVLG00005019059 ENSSVLG00005019021 Atlantogenata ANCESTRAL SPECIES 43 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Xenarthra ANCESTRAL SPECIES 586 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 Armadillo MODERN SPECIES 2205 WDPCP (ENSDNOG00000038652) ENSDNOG00000047467 MDH1 (ENSDNOG00000013329) UGP2 (ENSDNOG00000014882) ##22 VPS54 (ENSDNOG00000010697) PELI1 (ENSDNOG00000047280) LGALSL (ENSDNOG00000036857) ENSDNOG00000043010 ENSDNOG00000044856 ENSDNOG00000047214 ENSDNOG00000040550 SERTAD2 (ENSDNOG00000005514) SLC1A4 (ENSDNOG00000005164) Sloth MODERN SPECIES 5774 UGP2 (ENSCHOG00000011982) ##22 VPS54 (ENSCHOG00000011996) Afrotheria ANCESTRAL SPECIES 46 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Afrotheria_a ANCESTRAL SPECIES 45 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Elephant MODERN SPECIES 278 RASA3 (ENSLAFG00000022867) C13orf46 (ENSLAFG00000030245) GAS6 (ENSLAFG00000018256) TMEM255B (ENSLAFG00000027990) GRK1 (ENSLAFG00000004234) ATP4B (ENSLAFG00000008663) ENSLAFG00000007927 TMCO3 (ENSLAFG00000005971) DCUN1D2 (ENSLAFG00000005808) ENSLAFG00000005807 TMEM17 (ENSLAFG00000005803) OTX1 (ENSLAFG00000028656) ENSLAFG00000016497 ENSLAFG00000025584 MDH1 (ENSLAFG00000016504) UGP2 (ENSLAFG00000000399) ##22 VPS54 (ENSLAFG00000021799) PELI1 (ENSLAFG00000010471) LGALSL (ENSLAFG00000018660) AFTPH (ENSLAFG00000007172) SERTAD2 (ENSLAFG00000032288) SLC1A4 (ENSLAFG00000017358) CEP68 (ENSLAFG00000029833) RAB1A (ENSLAFG00000016666) ACTR2 (ENSLAFG00000010273) SPRED2 (ENSLAFG00000000394) MEIS1 (ENSLAFG00000003445) ETAA1 (ENSLAFG00000009209) C1D (ENSLAFG00000002083) DNAAF10 (ENSLAFG00000000042) PNO1 (ENSLAFG00000000046) Hyrax MODERN SPECIES 5318 UGP2 (ENSPCAG00000009683) ##22 VPS54 (ENSPCAG00000009807) ENSPCAG00000009971 Tenrec MODERN SPECIES 7331 ENSETEG00000016345 UGP2 (ENSETEG00000016349) ##22 VPS54 (ENSETEG00000016352) PELI1 (ENSETEG00000016359) Platypus MODERN SPECIES 20 PUS10 (ENSOANG00000012408) PEX13 (ENSOANG00000012410) SANBR (ENSOANG00000012411) ENSOANG00000012414 USP34 (ENSOANG00000012415) XPO1 (ENSOANG00000012417) ENSOANG00000012418 CCT4 (ENSOANG00000012419) COMMD1 (ENSOANG00000012420) B3GNT2 (ENSOANG00000012421) TMEM17 (ENSOANG00000012422) EHBP1 (ENSOANG00000012423) OTX1 (ENSOANG00000044489) WDPCP (ENSOANG00000012425) MDH1 (ENSOANG00000012426) UGP2 (ENSOANG00000012427) ##22 VPS54 (ENSOANG00000012428) PELI1 (ENSOANG00000012431) LGALSL (ENSOANG00000012432) ENSOANG00000036481 AFTPH (ENSOANG00000012433) SERTAD2 (ENSOANG00000012435) SLC1A4 (ENSOANG00000012436) ENSOANG00000045432 RAB1A (ENSOANG00000012438) ACTR2 (ENSOANG00000039143) SPRED2 (ENSOANG00000046721) MEIS1 (ENSOANG00000012441) ENSOANG00000012442 DNAAF10 (ENSOANG00000008385) PNO1 (ENSOANG00000045797) Sauria ANCESTRAL SPECIES 1 ENSGT01030000236025 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Lepidosauria ANCESTRAL SPECIES 69 ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.h ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Episquamata ANCESTRAL SPECIES ENSGT00940000160697 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT00940000156439.s ENSGT00940000162013 ENSGT00940000156439.r.a ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.h ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Laterata ANCESTRAL SPECIES 13 ENSGT00940000160697 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT00940000156439.s ENSGT00940000162013 ENSGT00940000156439.r.a ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.h ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c ENSGT00390000004284 Common wall lizard MODERN SPECIES 11 TFAP2D (ENSPMRG00000007272) ENSPMRG00000007258 ENSPMRG00000007239 ENSPMRG00000007046 ENSPMRG00000006997 FAM161A (ENSPMRG00000006987) CCT4 (ENSPMRG00000006964) COMMD1 (ENSPMRG00000006951) ENSPMRG00000006943 TMEM17 (ENSPMRG00000006917) EHBP1 (ENSPMRG00000006897) OTX1 (ENSPMRG00000006891) WDPCP (ENSPMRG00000006873) MDH1 (ENSPMRG00000006861) ENSPMRG00000006857 UGP2 (ENSPMRG00000006840) ##22 ENSPMRG00000006830 VPS54 (ENSPMRG00000006791) PELI1 (ENSPMRG00000006776) ENSPMRG00000006774 ENSPMRG00000006772 LGALSL (ENSPMRG00000006765) ENSPMRG00000006761 ENSPMRG00000006754 CDC5L (ENSPMRG00000006739) SUPT3H (ENSPMRG00000006700) RUNX2 (ENSPMRG00000006689) CLIC5 (ENSPMRG00000006681) RCAN2 (ENSPMRG00000006668) CYP39A1 (ENSPMRG00000006660) TDRD6 (ENSPMRG00000006652) Argentine black and white tegu MODERN SPECIES 54 TFAP2B (ENSSMRG00000005975) TFAP2D (ENSSMRG00000005974) ENSSMRG00000005927 ENSSMRG00000005909 ENSSMRG00000005739 FAM161A (ENSSMRG00000005692) CCT4 (ENSSMRG00000005614) COMMD1 (ENSSMRG00000005611) B3GNT2 (ENSSMRG00000005605) ENSSMRG00000005599 TMEM17 (ENSSMRG00000005554) EHBP1 (ENSSMRG00000005524) OTX1 (ENSSMRG00000005510) WDPCP (ENSSMRG00000005490) MDH1 (ENSSMRG00000005439) UGP2 (ENSSMRG00000005430) ##22 VPS54 (ENSSMRG00000005426) PELI1 (ENSSMRG00000005414) LGALSL (ENSSMRG00000005386) ENSSMRG00000005383 AFTPH (ENSSMRG00000005377) SERTAD2 (ENSSMRG00000005372) SLC1A4 (ENSSMRG00000005324) ENSSMRG00000005322 RAB1A (ENSSMRG00000005319) ENSSMRG00000005312 ACTR2 (ENSSMRG00000005307) ENSSMRG00000005304 ENSSMRG00000005300 SPRED2 (ENSSMRG00000005297) ENSSMRG00000005289 Toxicofera ANCESTRAL SPECIES ENSGT00940000156618 ENSGT00940000160697 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT00940000162013 ENSGT00940000156439.r.a ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT01100000263484.C.a.l ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.h ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000015405 ENSGT00950000183091.A.b Elapidae ANCESTRAL SPECIES ENSGT00940000156618 ENSGT00940000160697 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT00940000162013 ENSGT00940000156439.r.a.d ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT01100000263484.C.a.l ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.h ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000015405 ENSGT00950000183091.A.b Elapidae_a ANCESTRAL SPECIES 6 ENSGT00940000156618 ENSGT00940000160697 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT00940000162013.p ENSGT00940000156439.r.a.d ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT01100000263484.C.a.l ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.h ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000015405 ENSGT00950000183091.A.b Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00940000156618 ENSGT00940000160697 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT00940000162013.p ENSGT00940000156439.r.a.d ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT01100000263484.C.a.l ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A.h ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000015405 ENSGT00950000183091.A.b Mainland tiger snake MODERN SPECIES 23 FAM161A (ENSNSUG00000019087) CCT4 (ENSNSUG00000019089) ENSNSUG00000019090 B3GNT2 (ENSNSUG00000019091) TMEM17 (ENSNSUG00000019093) EHBP1 (ENSNSUG00000019094) OTX1 (ENSNSUG00000019118) WDPCP (ENSNSUG00000019119) MDH1 (ENSNSUG00000019120) UGP2 (ENSNSUG00000019121) ##22 VPS54 (ENSNSUG00000019122) PELI1 (ENSNSUG00000019123) LGALSL (ENSNSUG00000019124) MLNR (ENSNSUG00000019125) AFTPH (ENSNSUG00000019132) ENSNSUG00000019134 SERTAD2 (ENSNSUG00000019135) ENSNSUG00000019136 SLC1A4 (ENSNSUG00000019138) ENSNSUG00000019162 RAB1A (ENSNSUG00000019164) ACTR2 (ENSNSUG00000019165) SPRED2 (ENSNSUG00000019166) MEIS1 (ENSNSUG00000019167) C1D (ENSNSUG00000019174) Eastern brown snake MODERN SPECIES 56 TFAP2B (ENSPTXG00000006479) TFAP2D (ENSPTXG00000006480) ENSPTXG00000006481 ENSPTXG00000006483 ENSPTXG00000006485 ENSPTXG00000006487 ENSPTXG00000006489 CCT4 (ENSPTXG00000006490) COMMD1 (ENSPTXG00000006517) B3GNT2 (ENSPTXG00000006518) TMEM17 (ENSPTXG00000006519) EHBP1 (ENSPTXG00000006520) OTX1 (ENSPTXG00000006521) ENSPTXG00000006522 MDH1 (ENSPTXG00000006523) UGP2 (ENSPTXG00000006524) ##22 VPS54 (ENSPTXG00000006525) PELI1 (ENSPTXG00000006526) LGALSL (ENSPTXG00000006527) MLNR (ENSPTXG00000006528) AFTPH (ENSPTXG00000006529) ENSPTXG00000005770 SERTAD2 (ENSPTXG00000005772) SLC1A4 (ENSPTXG00000005773) ENSPTXG00000005775 RAB1A (ENSPTXG00000005777) ACTR2 (ENSPTXG00000005779) SPRED2 (ENSPTXG00000005781) MEIS1 (ENSPTXG00000005783) C1D (ENSPTXG00000005785) DNAAF10 (ENSPTXG00000005787) Blue-lipped sea krait MODERN SPECIES 8194 UGP2 (ENSLLTG00000017225) ##22 VPS54 (ENSLLTG00000017235) Indian cobra MODERN SPECIES TFAP2B (ENSNNAG00000014323) ENSNNAG00000014311 ENSNNAG00000014300 ENSNNAG00000014282 ENSNNAG00000014151 FAM161A (ENSNNAG00000014113) CCT4 (ENSNNAG00000014059) ENSNNAG00000014050 ENSNNAG00000014035 B3GNT2 (ENSNNAG00000014031) TMEM17 (ENSNNAG00000014018) EHBP1 (ENSNNAG00000013729) OTX1 (ENSNNAG00000013651) WDPCP (ENSNNAG00000013610) MDH1 (ENSNNAG00000013583) UGP2 (ENSNNAG00000013510) ##22 VPS54 (ENSNNAG00000013453) PELI1 (ENSNNAG00000013434) ENSNNAG00000013415 LGALSL (ENSNNAG00000013404) MLNR (ENSNNAG00000013400) ENSNNAG00000013378 ENSNNAG00000013342 SERTAD2 (ENSNNAG00000013335) SLC1A4 (ENSNNAG00000013270) ENSNNAG00000013240 RAB1A (ENSNNAG00000013227) ACTR2 (ENSNNAG00000013219) SPRED2 (ENSNNAG00000013140) MEIS1 (ENSNNAG00000013019) C1D (ENSNNAG00000012988) Lizard MODERN SPECIES ENSACAG00000005354 CRISP3 (ENSACAG00000005469) FAM161A (ENSACAG00000005568) CCT4 (ENSACAG00000005569) ENSACAG00000034625 COMMD1 (ENSACAG00000005706) B3GNT2 (ENSACAG00000005727) ENSACAG00000040766 ENSACAG00000037410 ENSACAG00000037825 EHBP1 (ENSACAG00000005744) OTX1 (ENSACAG00000005818) WDPCP (ENSACAG00000005832) ENSACAG00000005852 MDH1 (ENSACAG00000005865) UGP2 (ENSACAG00000005960) ##22 VPS54 (ENSACAG00000006033) PELI1 (ENSACAG00000040221) COPS8 (ENSACAG00000010495) ACKR3 (ENSACAG00000010490) IQCA1 (ENSACAG00000028076) ASB18 (ENSACAG00000010384) GBX2 (ENSACAG00000010361) AGAP1 (ENSACAG00000010229) ENSACAG00000035836 ENSACAG00000010093 ENSACAG00000010087 SH3BP4 (ENSACAG00000010071) ENSACAG00000041540 ENSACAG00000022125 ENSACAG00000009760 tuatara MODERN SPECIES 78 FAM161A (ENSSPUG00000013112) CCT4 (ENSSPUG00000013058) COMMD1 (ENSSPUG00000013049) B3GNT2 (ENSSPUG00000013043) TMEM17 (ENSSPUG00000013034) EHBP1 (ENSSPUG00000013010) OTX1 (ENSSPUG00000012988) WDPCP (ENSSPUG00000012958) MDH1 (ENSSPUG00000012931) UGP2 (ENSSPUG00000012916) ##22 VPS54 (ENSSPUG00000012900) PELI1 (ENSSPUG00000012897) LGALSL (ENSSPUG00000012885) ENSSPUG00000012880 AFTPH (ENSSPUG00000012864) SLC1A4 (ENSSPUG00000012843) ENSSPUG00000012834 RAB1A (ENSSPUG00000012822) ACTR2 (ENSSPUG00000012816) SPRED2 (ENSSPUG00000012741) Archelosauria ANCESTRAL SPECIES 1 ENSGT01030000236025 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Archosauria ANCESTRAL SPECIES 29 ENSGT01030000236025 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Aves ANCESTRAL SPECIES 35 ENSGT00390000015299.a.b.b.b ENSGT00530000063557.b ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Neognathae ANCESTRAL SPECIES 32 ENSGT00390000015299.a.b.b.b ENSGT00530000063557.b ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Neognathae_b ANCESTRAL SPECIES 32 ENSGT00940000154987 ENSGT00530000063557.b ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Passeriformes ANCESTRAL SPECIES 31 ENSGT00390000001878 ENSGT00940000154987 ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Great tit MODERN SPECIES 22 MAL (ENSPMJG00000003039) GPCPD1 (ENSPMJG00000003002) MRPS5 (ENSPMJG00000002980) SHLD1 (ENSPMJG00000002859) CHGB (ENSPMJG00000002857) TRMT6 (ENSPMJG00000002846) MCM8 (ENSPMJG00000002840) CRLS1 (ENSPMJG00000002831) COMMD1 (ENSPMJG00000002828) B3GNT2 (ENSPMJG00000002825) TMEM17 (ENSPMJG00000002814) EHBP1 (ENSPMJG00000002565) OTX1 (ENSPMJG00000002556) WDPCP (ENSPMJG00000002462) MDH1 (ENSPMJG00000002452) UGP2 (ENSPMJG00000002442) ##22 VPS54 (ENSPMJG00000002369) PELI1 (ENSPMJG00000002305) LGALSL (ENSPMJG00000002274) ENSPMJG00000002259 AFTPH (ENSPMJG00000002220) SERTAD2 (ENSPMJG00000002211) SLC1A4 (ENSPMJG00000002145) CEP68 (ENSPMJG00000002124) RAB1A (ENSPMJG00000002113) ACTR2 (ENSPMJG00000002085) SPRED2 (ENSPMJG00000002067) MEIS1 (ENSPMJG00000001854) ENSPMJG00000001774 C1D (ENSPMJG00000001708) DNAAF10 (ENSPMJG00000001703) Passeriformes_d ANCESTRAL SPECIES 32 ENSGT00390000001878 ENSGT00940000154987 ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Flycatcher MODERN SPECIES 21 ENSFALG00000002334 ENSFALG00000026399 ENSFALG00000002327 GPCPD1 (ENSFALG00000013563) CHGB (ENSFALG00000013569) TRMT6 (ENSFALG00000013575) MCM8 (ENSFALG00000013581) CRLS1 (ENSFALG00000013583) COMMD1 (ENSFALG00000013585) ENSFALG00000014145 TMEM17 (ENSFALG00000013589) EHBP1 (ENSFALG00000013591) OTX1 (ENSFALG00000013593) WDPCP (ENSFALG00000013596) MDH1 (ENSFALG00000013597) UGP2 (ENSFALG00000013598) ##22 VPS54 (ENSFALG00000013599) PELI1 (ENSFALG00000013605) LGALSL (ENSFALG00000013611) AFTPH (ENSFALG00000013616) ENSFALG00000028308 SERTAD2 (ENSFALG00000014149) SLC1A4 (ENSFALG00000013619) CEP68 (ENSFALG00000013621) RAB1A (ENSFALG00000023532) ENSFALG00000027263 ACTR2 (ENSFALG00000026727) SPRED2 (ENSFALG00000028802) MEIS1 (ENSFALG00000013636) ENSFALG00000013638 C1D (ENSFALG00000024869) Passeriformes_g ANCESTRAL SPECIES 42 ENSGT00390000001878 ENSGT00940000154987 ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Medium ground finch MODERN SPECIES 99 TMEM17 (ENSGFOG00000011060) EHBP1 (ENSGFOG00000011082) OTX1 (ENSGFOG00000011126) WDPCP (ENSGFOG00000011130) MDH1 (ENSGFOG00000011139) UGP2 (ENSGFOG00000011150) ##22 VPS54 (ENSGFOG00000011155) PELI1 (ENSGFOG00000007371) LGALSL (ENSGFOG00000007383) AFTPH (ENSGFOG00000007395) ENSGFOG00000007408 SERTAD2 (ENSGFOG00000007413) SLC1A4 (ENSGFOG00000007417) CEP68 (ENSGFOG00000007430) RAB1A (ENSGFOG00000007437) ACTR2 (ENSGFOG00000007444) SPRED2 (ENSGFOG00000007456) MEIS1 (ENSGFOG00000007474) ENSGFOG00000007544 C1D (ENSGFOG00000007555) DNAAF10 (ENSGFOG00000007564) Passeroidea ANCESTRAL SPECIES 41 ENSGT00390000001878 ENSGT00940000154987 ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Common canary MODERN SPECIES 38 GINS1 (ENSSCAG00000000412) SLC8A1 (ENSSCAG00000000424) MRPS5 (ENSSCAG00000000440) MAL (ENSSCAG00000000453) GPCPD1 (ENSSCAG00000000473) SHLD1 (ENSSCAG00000000512) CHGB (ENSSCAG00000000518) TRMT6 (ENSSCAG00000000543) MCM8 (ENSSCAG00000000614) CRLS1 (ENSSCAG00000000633) TMEM17 (ENSSCAG00000000656) EHBP1 (ENSSCAG00000000669) OTX1 (ENSSCAG00000000714) WDPCP (ENSSCAG00000000727) MDH1 (ENSSCAG00000000782) UGP2 (ENSSCAG00000000799) ##22 VPS54 (ENSSCAG00000000820) PELI1 (ENSSCAG00000000846) LGALSL (ENSSCAG00000000875) AFTPH (ENSSCAG00000000895) ENSSCAG00000000909 SERTAD2 (ENSSCAG00000000919) SLC1A4 (ENSSCAG00000000927) CEP68 (ENSSCAG00000000934) RAB1A (ENSSCAG00000000941) ACTR2 (ENSSCAG00000000959) SPRED2 (ENSSCAG00000000973) MEIS1 (ENSSCAG00000000987) ENSSCAG00000001007 ENSSCAG00000001019 C1D (ENSSCAG00000001030) Zebra finch MODERN SPECIES 23 SLC8A1 (ENSTGUG00000002147) MRPS5 (ENSTGUG00000002166) MAL (ENSTGUG00000025528) GPCPD1 (ENSTGUG00000002182) CHGB (ENSTGUG00000025948) TRMT6 (ENSTGUG00000002195) MCM8 (ENSTGUG00000002203) CRLS1 (ENSTGUG00000002210) COMMD1 (ENSTGUG00000002215) B3GNT2 (ENSTGUG00000002218) TMEM17 (ENSTGUG00000002226) EHBP1 (ENSTGUG00000002228) OTX1 (ENSTGUG00000019683) WDPCP (ENSTGUG00000002232) MDH1 (ENSTGUG00000002244) UGP2 (ENSTGUG00000002252) ##22 VPS54 (ENSTGUG00000002268) PELI1 (ENSTGUG00000002289) LGALSL (ENSTGUG00000025180) ENSTGUG00000025533 AFTPH (ENSTGUG00000002302) SERTAD2 (ENSTGUG00000024469) SLC1A4 (ENSTGUG00000002315) CEP68 (ENSTGUG00000029210) RAB1A (ENSTGUG00000002328) ACTR2 (ENSTGUG00000002335) SPRED2 (ENSTGUG00000025635) MEIS1 (ENSTGUG00000002353) ENSTGUG00000002363 C1D (ENSTGUG00000029046) DNAAF10 (ENSTGUG00000018213) Neognathae_c ANCESTRAL SPECIES 35 ENSGT00940000154987 ENSGT00530000063557.b ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Kakapo MODERN SPECIES 23 MAL (ENSSHBG00005014293) THUMPD2 (ENSSHBG00005014302) GPCPD1 (ENSSHBG00005014317) SHLD1 (ENSSHBG00005014340) CHGB (ENSSHBG00005014349) TRMT6 (ENSSHBG00005014364) MCM8 (ENSSHBG00005014414) CRLS1 (ENSSHBG00005014928) COMMD1 (ENSSHBG00005014933) B3GNT2 (ENSSHBG00005014942) TMEM17 (ENSSHBG00005014948) EHBP1 (ENSSHBG00005014965) OTX1 (ENSSHBG00005014991) WDPCP (ENSSHBG00005015001) MDH1 (ENSSHBG00005015017) UGP2 (ENSSHBG00005015028) ##22 VPS54 (ENSSHBG00005015051) ENSSHBG00005015079 PELI1 (ENSSHBG00005015086) LGALSL (ENSSHBG00005015090) AFTPH (ENSSHBG00005015097) ENSSHBG00005015104 SERTAD2 (ENSSHBG00005015121) SLC1A4 (ENSSHBG00005015130) CEP68 (ENSSHBG00005015142) RAB1A (ENSSHBG00005015159) ACTR2 (ENSSHBG00005015166) SPRED2 (ENSSHBG00005015173) ENSSHBG00005015181 MEIS1 (ENSSHBG00005015189) ENSSHBG00005015207 Golden eagle MODERN SPECIES 24 C6orf58 (ENSACCG00020005290) THUMPD2 (ENSACCG00020005303) GPCPD1 (ENSACCG00020005326) SHLD1 (ENSACCG00020005345) CHGB (ENSACCG00020005353) TRMT6 (ENSACCG00020005372) MCM8 (ENSACCG00020005397) CRLS1 (ENSACCG00020005476) COMMD1 (ENSACCG00020005501) B3GNT2 (ENSACCG00020005515) TMEM17 (ENSACCG00020005527) EHBP1 (ENSACCG00020005580) OTX1 (ENSACCG00020005656) WDPCP (ENSACCG00020005678) MDH1 (ENSACCG00020005699) UGP2 (ENSACCG00020005728) ##22 VPS54 (ENSACCG00020005801) PELI1 (ENSACCG00020005906) LGALSL (ENSACCG00020005930) AFTPH (ENSACCG00020005956) ENSACCG00020005980 SERTAD2 (ENSACCG00020005994) SLC1A4 (ENSACCG00020006005) CEP68 (ENSACCG00020006029) RAB1A (ENSACCG00020006051) ACTR2 (ENSACCG00020006080) SPRED2 (ENSACCG00020006109) MEIS1 (ENSACCG00020006130) ENSACCG00020006175 C1D (ENSACCG00020006189) DNAAF10 (ENSACCG00020006200) Galloanserae ANCESTRAL SPECIES 29 ENSGT00390000015299.a.b.b.b ENSGT00530000063557.b ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Phasianidae ANCESTRAL SPECIES 29 ENSGT00940000154524.b ENSGT00390000018245.c ENSGT00550000074867 ENSGT00940000161424 ENSGT00550000075024 ENSGT00530000063425.a.b ENSGT00940000159118 ENSGT00390000006820 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Japanese quail MODERN SPECIES 21 PTK7 (ENSCJPG00005015274) SRF (ENSCJPG00005015271) XDH (ENSCJPG00005011886) ESF1 (ENSCJPG00005011869) ENSCJPG00005011862 FLRT3 (ENSCJPG00005011861) ENSCJPG00005011850 ENSCJPG00005011809 SNRPB2 (ENSCJPG00005011807) OTOR (ENSCJPG00005011805) TMEM17 (ENSCJPG00005011798) EHBP1 (ENSCJPG00005011795) OTX1 (ENSCJPG00005011794) WDPCP (ENSCJPG00005011776) MDH1 (ENSCJPG00005011775) UGP2 (ENSCJPG00005011774) ##22 VPS54 (ENSCJPG00005011596) PELI1 (ENSCJPG00005011590) ENSCJPG00005011569 ENSCJPG00005011568 ENSCJPG00005011566 AFTPH (ENSCJPG00005011562) SERTAD2 (ENSCJPG00005011560) SLC1A4 (ENSCJPG00005011555) CEP68 (ENSCJPG00005011547) RAB1A (ENSCJPG00005011546) ACTR2 (ENSCJPG00005011545) SPRED2 (ENSCJPG00005011544) MEIS1 (ENSCJPG00005011532) ENSCJPG00005011513 C1D (ENSCJPG00005011500) Phasianidae_b ANCESTRAL SPECIES 28 ENSGT00940000154524.b ENSGT00390000018245.c ENSGT00550000074867 ENSGT00940000161424 ENSGT00550000075024 ENSGT00530000063425.a.b ENSGT00940000159118 ENSGT00390000006820 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Chicken MODERN SPECIES 22 SPDYA (ENSGALG00010017688) EPCAM (ENSGALG00010017692) MSH2 (ENSGALG00010017712) KCNK12 (ENSGALG00010017723) MSH6 (ENSGALG00010017746) FBXO11 (ENSGALG00010017762) FOXN2 (ENSGALG00010017768) PPP1R21 (ENSGALG00010017797) COMMD1 (ENSGALG00010017876) B3GNT2 (ENSGALG00010017838) TMEM17 (ENSGALG00010018880) EHBP1 (ENSGALG00010016584) OTX1 (ENSGALG00010016593) WDPCP (ENSGALG00010016605) MDH1 (ENSGALG00010016624) UGP2 (ENSGALG00010018904) ##22 VPS54 (ENSGALG00010018923) PELI3 (ENSGALG00010018958) LGALSL (ENSGALG00010017115) AFTPH (ENSGALG00010017141) ENSGALG00010017151 SERTAD2 (ENSGALG00010019243) SLC1A4 (ENSGALG00010019257) CEP68 (ENSGALG00010017594) RAB1B (ENSGALG00010017622) ENSGALG00010017627 ACTR2 (ENSGALG00010016276) SPRED2 (ENSGALG00010017672) MEIS1 (ENSGALG00010017708) ENSGALG00010017722 ENSGALG00010017728 Turkey MODERN SPECIES 11 SPDYA (ENSMGAG00000005227) EPCAM (ENSMGAG00000005193) ENSMGAG00000021705 MSH2 (ENSMGAG00000005134) KCNK12 (ENSMGAG00000018988) MSH6 (ENSMGAG00000005109) FBXO11 (ENSMGAG00000005080) FOXN2 (ENSMGAG00000005062) PPP1R21 (ENSMGAG00000004979) COMMD1 (ENSMGAG00000005060) B3GNT2 (ENSMGAG00000015914) TMEM17 (ENSMGAG00000004966) EHBP1 (ENSMGAG00000004927) WDPCP (ENSMGAG00000004854) MDH1 (ENSMGAG00000004885) UGP2 (ENSMGAG00000004824) ##22 VPS54 (ENSMGAG00000004768) PELI1 (ENSMGAG00000019753) LGALSL (ENSMGAG00000004734) ENSMGAG00000019014 AFTPH (ENSMGAG00000004693) SERTAD2 (ENSMGAG00000015908) SLC1A4 (ENSMGAG00000004682) CEP68 (ENSMGAG00000004667) RAB1A (ENSMGAG00000004611) ENSMGAG00000019067 ACTR2 (ENSMGAG00000004587) SPRED2 (ENSMGAG00000004563) MEIS1 (ENSMGAG00000021593) ENSMGAG00000004531 DNAAF10 (ENSMGAG00000004517) Anatidae ANCESTRAL SPECIES 60 ENSGT00390000015299.a.b.b.b ENSGT00530000063557.b ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00390000001858 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Duck MODERN SPECIES 21 ENSAPLG00000008965 THUMPD2 (ENSAPLG00000008775) GPCPD1 (ENSAPLG00000008381) SHLD1 (ENSAPLG00000021416) CHGB (ENSAPLG00000008282) TRMT6 (ENSAPLG00000007761) MCM8 (ENSAPLG00000007052) CRLS1 (ENSAPLG00000007013) COMMD1 (ENSAPLG00000006974) B3GNT2 (ENSAPLG00000001464) TMEM17 (ENSAPLG00000006949) EHBP1 (ENSAPLG00000006773) OTX1 (ENSAPLG00000024184) WDPCP (ENSAPLG00000010025) MDH1 (ENSAPLG00000009983) UGP2 (ENSAPLG00000009870) ##22 VPS54 (ENSAPLG00000009734) PELI1 (ENSAPLG00000009701) LGALSL (ENSAPLG00000022507) ENSAPLG00000017313 AFTPH (ENSAPLG00000009640) SERTAD2 (ENSAPLG00000000672) SLC1A4 (ENSAPLG00000009621) CEP68 (ENSAPLG00000016942) RAB1A (ENSAPLG00000018342) ACTR2 (ENSAPLG00000009440) SPRED2 (ENSAPLG00000009387) MEIS1 (ENSAPLG00000009141) ENSAPLG00000025999 C1D (ENSAPLG00000009320) DNAAF10 (ENSAPLG00000029023) Pink-footed goose MODERN SPECIES 179 GPCPD1 (ENSABRG00000007166) SHLD1 (ENSABRG00000007262) CHGB (ENSABRG00000007265) TRMT6 (ENSABRG00000007269) MCM8 (ENSABRG00000007304) CRLS1 (ENSABRG00000007396) COMMD1 (ENSABRG00000007438) B3GNT2 (ENSABRG00000007469) TMEM17 (ENSABRG00000007473) EHBP1 (ENSABRG00000007490) ENSABRG00000007541 ENSABRG00000007545 OTX1 (ENSABRG00000007549) WDPCP (ENSABRG00000007562) MDH1 (ENSABRG00000007583) UGP2 (ENSABRG00000007598) ##22 VPS54 (ENSABRG00000007620) African ostrich MODERN SPECIES 1035 HNRNPLL (ENSSCUG00000016652) ATL2 (ENSSCUG00000016653) EIF4A3 (ENSSCUG00000016654) GINS1 (ENSSCUG00000016655) GPCPD1 (ENSSCUG00000016657) SHLD1 (ENSSCUG00000016660) CHGB (ENSSCUG00000016662) TRMT6 (ENSSCUG00000016663) MCM8 (ENSSCUG00000016665) COMMD1 (ENSSCUG00000016672) B3GNT2 (ENSSCUG00000016675) TMEM17 (ENSSCUG00000016683) EHBP1 (ENSSCUG00000016694) WDPCP (ENSSCUG00000016705) MDH1 (ENSSCUG00000016711) UGP2 (ENSSCUG00000016718) ##22 VPS54 (ENSSCUG00000016720) PELI1 (ENSSCUG00000016725) LGALSL (ENSSCUG00000016734) AFTPH (ENSSCUG00000016739) ENSSCUG00000016745 SERTAD2 (ENSSCUG00000016748) SLC1A4 (ENSSCUG00000016756) ENSSCUG00000016764 RAB1A (ENSSCUG00000016768) ACTR2 (ENSSCUG00000016771) SPRED2 (ENSSCUG00000016776) ENSSCUG00000016785 ENSSCUG00000016796 C1D (ENSSCUG00000016803) DNAAF10 (ENSSCUG00000016805) Australian saltwater crocodile MODERN SPECIES 60 PUS10 (ENSCPRG00005013684) PEX13 (ENSCPRG00005013679) SANBR (ENSCPRG00005013668) ENSCPRG00005013659 USP34 (ENSCPRG00005013436) XPO1 (ENSCPRG00005013231) ENSCPRG00005013195 FAM161A (ENSCPRG00005013180) CCT4 (ENSCPRG00005013168) COMMD1 (ENSCPRG00005013164) TMEM17 (ENSCPRG00005013145) EHBP1 (ENSCPRG00005013126) ENSCPRG00005013108 WDPCP (ENSCPRG00005013098) MDH1 (ENSCPRG00005013087) UGP2 (ENSCPRG00005013070) ##22 VPS54 (ENSCPRG00005013060) PELI1 (ENSCPRG00005013051) ENSCPRG00005013039 LGALSL (ENSCPRG00005013037) ENSCPRG00005013030 AFTPH (ENSCPRG00005013021) SERTAD2 (ENSCPRG00005013016) SLC1A4 (ENSCPRG00005013000) CEP68 (ENSCPRG00005012992) RAB1A (ENSCPRG00005012987) ENSCPRG00005012975 ACTR2 (ENSCPRG00005012952) SPRED2 (ENSCPRG00005012941) ENSCPRG00005012911 MEIS1 (ENSCPRG00005012878) Cryptodira ANCESTRAL SPECIES 49 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Testudinoidea ANCESTRAL SPECIES ENSGT00940000159062 ENSGT00950000183045.B ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162977 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Testudinidae ANCESTRAL SPECIES 6 ENSGT00940000159062 ENSGT00950000183045.B ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162977 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a.c ENSGT00390000001858 ENSGT00940000154186.a.d ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Goode s thornscrub tortoise MODERN SPECIES 17 TASP1 (ENSGEVG00005010643) ENSGEVG00005010560 ENSGEVG00005010522 NDUFAF5 (ENSGEVG00005010165) SEL1L2 (ENSGEVG00005009876) FLRT3 (ENSGEVG00005009842) ENSGEVG00005009818 ENSGEVG00005009613 COMMD1 (ENSGEVG00005009544) B3GNT2 (ENSGEVG00005009523) TMEM17 (ENSGEVG00005009491) EHBP1 (ENSGEVG00005009124) OTX1 (ENSGEVG00005009002) ENSGEVG00005008975 MDH1 (ENSGEVG00005004454) UGP2 (ENSGEVG00005004320) ##22 VPS54 (ENSGEVG00005004270) PELI1 (ENSGEVG00005004247) LGALSL (ENSGEVG00005004215) ENSGEVG00005004188 ENSGEVG00005004165 ENSGEVG00005004141 SERTAD2 (ENSGEVG00005004127) SLC1A4 (ENSGEVG00005004113) CEP68 (ENSGEVG00005003967) RAB1A (ENSGEVG00005003898) ACTR2 (ENSGEVG00005003844) SPRED2 (ENSGEVG00005003835) MEIS1 (ENSGEVG00005003813) ENSGEVG00005003795 C1D (ENSGEVG00005003784) Abingdon island giant tortoise MODERN SPECIES 2412 ENSCABG00000009550 COMMD1 (ENSCABG00000009556) B3GNT2 (ENSCABG00000009558) TMEM17 (ENSCABG00000009562) EHBP1 (ENSCABG00000009568) OTX1 (ENSCABG00000009851) ENSCABG00000009854 MDH1 (ENSCABG00000009857) UGP2 (ENSCABG00000009859) ##22 VPS54 (ENSCABG00000009863) Emydidae ANCESTRAL SPECIES 41 ENSGT00940000159062 ENSGT00950000183045.B ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162977 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000153899.b.b ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00950000183210.d.b ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 Three-toed box turtle MODERN SPECIES 62 ENSTMTG00000011328 ENSTMTG00000011336 NDUFAF5 (ENSTMTG00000011360) SEL1L2 (ENSTMTG00000011547) ENSTMTG00000011585 FLRT3 (ENSTMTG00000011594) ENSTMTG00000011617 COMMD1 (ENSTMTG00000011699) B3GNT2 (ENSTMTG00000011706) TMEM17 (ENSTMTG00000011710) EHBP1 (ENSTMTG00000011723) OTX1 (ENSTMTG00000011768) ENSTMTG00000011785 ENSTMTG00000011798 MDH1 (ENSTMTG00000011807) UGP2 (ENSTMTG00000011829) ##22 VPS54 (ENSTMTG00000011848) PELI1 (ENSTMTG00000011887) LGALSL (ENSTMTG00000011905) AFTPH (ENSTMTG00000011932) ENSTMTG00000011985 SERTAD2 (ENSTMTG00000012002) ENSTMTG00000012010 CEP68 (ENSTMTG00000012027) RAB1A (ENSTMTG00000012038) ACTR2 (ENSTMTG00000012053) SPRED2 (ENSTMTG00000012084) ENSTMTG00000012102 MEIS1 (ENSTMTG00000012126) ENSTMTG00000012173 ENSTMTG00000012186 painted turtle MODERN SPECIES 798 COMMD1 (ENSCPBG00000009436) B3GNT2 (ENSCPBG00000009448) TMEM17 (ENSCPBG00000009468) ENSCPBG00000009473 EHBP1 (ENSCPBG00000009627) OTX1 (ENSCPBG00000013188) WDPCP (ENSCPBG00000013191) MDH1 (ENSCPBG00000013198) UGP2 (ENSCPBG00000013202) ##22 VPS54 (ENSCPBG00000013204) ENSCPBG00000013207 PELI1 (ENSCPBG00000013208) LGALSL (ENSCPBG00000013218) AFTPH (ENSCPBG00000013222) ENSCPBG00000013228 SERTAD2 (ENSCPBG00000013231) SLC1A4 (ENSCPBG00000013236) CEP68 (ENSCPBG00000013240) RAB1A (ENSCPBG00000013243) ACTR2 (ENSCPBG00000013248) SPRED2 (ENSCPBG00000013250) ENSCPBG00000013254 MEIS1 (ENSCPBG00000013258) Chinese turtle MODERN SPECIES 375 KIF16B (ENSPSIG00000009336) COMMD1 (ENSPSIG00000013161) B3GNT2 (ENSPSIG00000001211) TMEM17 (ENSPSIG00000013175) EHBP1 (ENSPSIG00000013180) WDPCP (ENSPSIG00000013662) MDH1 (ENSPSIG00000014797) UGP2 (ENSPSIG00000015139) ##22 VPS54 (ENSPSIG00000016091) PELI1 (ENSPSIG00000017442) ENSPSIG00000017632 LGALSL (ENSPSIG00000017748) AFTPH (ENSPSIG00000017890) SERTAD2 (ENSPSIG00000017893) SLC1A4 (ENSPSIG00000017947) CEP68 (ENSPSIG00000007957) RAB1A (ENSPSIG00000008028) ACTR2 (ENSPSIG00000008124) SPRED2 (ENSPSIG00000008800) MEIS1 (ENSPSIG00000009187) ENSPSIG00000001224 ENSPSIG00000009822 ENSPSIG00000001231 Anura ANCESTRAL SPECIES 16 ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.a ENSGT00940000155337 ENSGT00940000154347.a ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327 ENSGT00390000009597 ENSGT00390000015405 ENSGT00950000183091.A.b Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 7 SANBR (ENSLLEG00000005906) USP34 (ENSLLEG00000006009) XPO1 (ENSLLEG00000006444) ENSLLEG00000006618 FAM161A (ENSLLEG00000006638) ENSLLEG00000006686 CCT4 (ENSLLEG00000006712) COMMD1 (ENSLLEG00000006880) ENSLLEG00000006902 B3GNT2 (ENSLLEG00000006916) EHBP1 (ENSLLEG00000006950) ENSLLEG00000007289 OTX1 (ENSLLEG00000007304) WDPCP (ENSLLEG00000007365) MDH1 (ENSLLEG00000007707) ENSLLEG00000007978 ##22 VPS54 (ENSLLEG00000008019) PELI1 (ENSLLEG00000008444) ENSLLEG00000008486 ENSLLEG00000008502 ENSLLEG00000008521 LGALSL (ENSLLEG00000008554) SYS1 (ENSLLEG00000008712) AFTPH (ENSLLEG00000008756) SERTAD2 (ENSLLEG00000009029) SLC1A4 (ENSLLEG00000009051) ENSLLEG00000009114 RAB1B (ENSLLEG00000009169) ACTR2 (ENSLLEG00000009396) ENSLLEG00000009622 SPRED2 (ENSLLEG00000009649) Leishan spiny toad MODERN SPECIES 6 MRPS35 (ENSLLEG00000013667) ENSLLEG00000013722 ENSLLEG00000013880 TULP3 (ENSLLEG00000013921) ENSLLEG00000014035 FOXM1 (ENSLLEG00000014067) ENSLLEG00000014147 ITFG2 (ENSLLEG00000014222) NRIP2 (ENSLLEG00000014911) ENSLLEG00000014951 FKBP4 (ENSLLEG00000014971) ENSLLEG00000015064 DDX11 (ENSLLEG00000005294) ENSLLEG00000005848 ENSLLEG00000005893 ENSLLEG00000006138 ##22 ENSLLEG00000006210 IQSEC3 (ENSLLEG00000006255) ENSLLEG00000006523 ENSLLEG00000006533 ENSLLEG00000006557 ENSLLEG00000006758 ENSLLEG00000006773 ENSLLEG00000006797 ENSLLEG00000006936 ENSLLEG00000006955 ENSLLEG00000006967 ENSLLEG00000007005 ENSLLEG00000007291 SLC6A13 (ENSLLEG00000007331) ENSLLEG00000007500 Frog MODERN SPECIES 5 rel (ENSXETG00000002209) ENSXETG00000048162 pus10 (ENSXETG00000002210) pex13 (ENSXETG00000002212) sanbr (ENSXETG00000002217) usp34 (ENSXETG00000002218) xpo1 (ENSXETG00000002224) fam161a (ENSXETG00000002233) cct4 (ENSXETG00000002227) commd1 (ENSXETG00000002235) b3gnt2 (ENSXETG00000002237) ehbp1 (ENSXETG00000013029) otx1 (ENSXETG00000040503) wdpcp (ENSXETG00000013020) mdh1 (ENSXETG00000013016) ugp2 (ENSXETG00000013007) ##22 ENSXETG00000046337 vps54 (ENSXETG00000013000) ENSXETG00000043346 peli1 (ENSXETG00000012997) ENSXETG00000038106 ENSXETG00000044468 lgalsl (ENSXETG00000025808) sys1 (ENSXETG00000047554) ENSXETG00000036875 aftph (ENSXETG00000014023) sertad2 (ENSXETG00000014022) slc1a4 (ENSXETG00000014014) cep68 (ENSXETG00000031207) rab1a (ENSXETG00000014011) actr2 (ENSXETG00000014001) Coelacanth DUPLICATION Coelacanth MODERN SPECIES 268 USP34 (ENSLACG00000018363) XPO1 (ENSLACG00000018213) ENSLACG00000018195 ENSLACG00000018120 CCT4 (ENSLACG00000018104) COMMD1 (ENSLACG00000017947) B3GNT2 (ENSLACG00000017889) ENSLACG00000017727 EHBP1 (ENSLACG00000017240) OTX1 (ENSLACG00000017220) WDPCP (ENSLACG00000016832) MDH1 (ENSLACG00000016626) UGP2 (ENSLACG00000016454) ##22 VPS54 (ENSLACG00000016185) PELI1 (ENSLACG00000015880) ENSLACG00000015557 LGALSL (ENSLACG00000015424) AFTPH (ENSLACG00000015062) SERTAD2 (ENSLACG00000014958) slc1a4 (ENSLACG00000013933) slc1a4 (ENSLACG00000013894) ENSLACG00000013207 RAB1A (ENSLACG00000012869) zgc:153169 (ENSLACG00000012519) ACTR2 (ENSLACG00000012086) SPRED2 (ENSLACG00000010623) Coelacanth MODERN SPECIES 653 CCDC85B (ENSLACG00000013780) FIBP (ENSLACG00000013461) EFEMP2 (ENSLACG00000013010) ENSLACG00000012687 ENSLACG00000012438 ENSLACG00000022155 SNX32 (ENSLACG00000011797) OVOL1 (ENSLACG00000011340) KAT5 (ENSLACG00000010274) ENSLACG00000010120 ENSLACG00000009602 ZNRD2 (ENSLACG00000009458) FAM89B (ENSLACG00000009231) ENSLACG00000007461 ENSLACG00000006608 ENSLACG00000005746 ##22 BBS1 (ENSLACG00000004821) DPP3 (ENSLACG00000003427) PELI3 (ENSLACG00000002591) Actinopterygii ANCESTRAL SPECIES 19 ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.b ENSGT00940000166587 ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00950000183045.C ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327.l ENSGT00390000009597 Reedfish DUPLICATION Reedfish MODERN SPECIES ppp1r14ba (ENSECRG00000001899) plcb3 (ENSECRG00000001823) ENSECRG00000001689 ENSECRG00000001595 ENSECRG00000001558 pola2 (ENSECRG00000001528) cdc42ep2 (ENSECRG00000001511) dpf2 (ENSECRG00000001454) ENSECRG00000001406 ENSECRG00000001383 SIPA1 (ENSECRG00000001315) ENSECRG00000001264 ENSECRG00000001131 FAM89B (ENSECRG00000001059) znrd2 (ENSECRG00000001038) ENSECRG00000001019 ##22 ENSECRG00000001001 ENSECRG00000000987 LTBP3 (ENSECRG00000000894) ENSECRG00000000827 ENSECRG00000000805 zgc:165604 (ENSECRG00000000785) ENSECRG00000000771 ENSECRG00000000753 ZBTB9 (ENSECRG00000000734) ENSECRG00000000730 SYNGAP1 (ENSECRG00000000684) PHF1 (ENSECRG00000000647) grcc10 (ENSECRG00000000633) ENSECRG00000000623 ENSECRG00000000611 Reedfish MODERN SPECIES 6 flrt3 (ENSECRG00000018051) KIF16B (ENSECRG00000018085) SNRPB2 (ENSECRG00000018213) OTOR (ENSECRG00000018250) pcsk2 (ENSECRG00000018365) BFSP1 (ENSECRG00000019405) ENSECRG00000019440 FAM161A (ENSECRG00000019469) cct4 (ENSECRG00000019511) commd1 (ENSECRG00000019553) b3gnt2a (ENSECRG00000019579) EHBP1 (ENSECRG00000019606) otx1 (ENSECRG00000019648) ENSECRG00000019668 mdh1ab (ENSECRG00000019698) ugp2a (ENSECRG00000019749) ##22 vps54 (ENSECRG00000019821) ENSECRG00000019880 lgalslb (ENSECRG00000019917) aftpha (ENSECRG00000019951) sertad2b (ENSECRG00000019987) ENSECRG00000020001 rab1ab (ENSECRG00000020049) zgc:153169 (ENSECRG00000020103) ACTR2 (ENSECRG00000020143) spred2b (ENSECRG00000020195) meis1b (ENSECRG00000020236) ENSECRG00000020320 c1d (ENSECRG00000020336) ints9 (ENSECRG00000020351) pno1 (ENSECRG00000020369) Neopterygii ANCESTRAL SPECIES 3 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000163878 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.b ENSGT00940000166587 ENSGT00940000155337 ENSGT00940000154186.a ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00950000183045.C ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841 ENSGT00940000156327.l ENSGT00390000009597 Spotted gar MODERN SPECIES 654 ENSLOCG00000016116 ENSLOCG00000016115 USP34 (ENSLOCG00000016101) XPO1 (ENSLOCG00000016095) ENSLOCG00000016094 ENSLOCG00000016093 FAM161A (ENSLOCG00000016091) cct4 (ENSLOCG00000016088) commd1 (ENSLOCG00000016086) b3gnt2a (ENSLOCG00000016084) ENSLOCG00000016082 EHBP1 (ENSLOCG00000016075) otx1 (ENSLOCG00000016074) WDPCP (ENSLOCG00000016068) mdh1ab (ENSLOCG00000016063) ugp2a (ENSLOCG00000016059) ##22 vps54 (ENSLOCG00000016056) ENSLOCG00000016053 ENSLOCG00000016051 lgalslb (ENSLOCG00000016049) AFTPH (ENSLOCG00000016046) sertad2b (ENSLOCG00000017361) slc1a4 (ENSLOCG00000016041) cep68 (ENSLOCG00000016038) rab1ab (ENSLOCG00000016037) zgc:153169 (ENSLOCG00000016036) actr2a (ENSLOCG00000016032) spred2b (ENSLOCG00000016028) meis1b (ENSLOCG00000016026) ENSLOCG00000016025 c1d (ENSLOCG00000016024) Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000153464.B.y ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000153464.B.y ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000153464.B.y ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000153464.B.y ##22 Salmoninae ANCESTRAL SPECIES ENSGT00940000153464.B.y ##22 Huchen MODERN SPECIES 2620 ENSHHUG00000015758 ENSHHUG00000015941 ##22 ENSHHUG00000015947 peli1b (ENSHHUG00000015953) ENSHHUG00000015974 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 39 ENSGT00940000163878 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00940000178862 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00390000001858 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00950000183045.C ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 94 ENSGT00910000147025 ENSGT00940000156983.a.a.j ENSGT00940000156467.o ENSGT00940000158732.k ENSGT00390000007529 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00940000178862 ENSGT00550000074956 ENSGT00390000012029 ENSGT00940000155345.p ENSGT01100000263601 ENSGT00940000161234.f ENSGT00530000063410.a ENSGT00940000153464.B.z.a.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.b.a ENSGT00940000155337.`b.a ENSGT00940000177082 ENSGT00940000154186.a.r Asian bonytongue MODERN SPECIES 7 bcl11aa (ENSSFOG00015031714) ENSSFOG00015002513 papolg (ENSSFOG00015002383) rel (ENSSFOG00015002336) pus10 (ENSSFOG00015002234) USP34 (ENSSFOG00015001953) XPO1 (ENSSFOG00015001881) ENSSFOG00015029812 ENSSFOG00015001847 cct4 (ENSSFOG00015001765) commd1 (ENSSFOG00015001751) B3GNT2 (ENSSFOG00015001747) ENSSFOG00015001741 OTX1 (ENSSFOG00015001725) MDH1 (ENSSFOG00015001676) ugp2a (ENSSFOG00015001656) ##22 vps54 (ENSSFOG00015001545) ENSSFOG00015031456 lgalsla (ENSSFOG00015001472) ENSSFOG00015001442 aftpha (ENSSFOG00015001420) sertad2b (ENSSFOG00015024685) slc1a4 (ENSSFOG00015001340) rab1ab (ENSSFOG00015029420) ACTR2 (ENSSFOG00015001243) spred2b (ENSSFOG00015001205) meis1b (ENSSFOG00015001129) ENSSFOG00015001088 pno1 (ENSSFOG00015001066) ppp3r1a (ENSSFOG00015001039) PLEK (ENSSFOG00015001005) P. kingsleyae MODERN SPECIES 21 ccdc85al (ENSPKIG00000006178) ENSPKIG00000006131 bcl11aa (ENSPKIG00000006097) papolg (ENSPKIG00000006027) rel (ENSPKIG00000005982) pus10 (ENSPKIG00000005909) USP34 (ENSPKIG00000005774) XPO1 (ENSPKIG00000005688) FAM161A (ENSPKIG00000005663) cct4 (ENSPKIG00000005618) commd1 (ENSPKIG00000005530) B3GNT2 (ENSPKIG00000005518) ENSPKIG00000005498 OTX1 (ENSPKIG00000005463) MDH1 (ENSPKIG00000005390) ugp2a (ENSPKIG00000005328) ##22 vps54 (ENSPKIG00000005241) ENSPKIG00000005190 lgalsla (ENSPKIG00000005170) ENSPKIG00000005147 aftpha (ENSPKIG00000005133) sertad2b (ENSPKIG00000005118) SLC1A4 (ENSPKIG00000005084) ENSPKIG00000005049 actr2a (ENSPKIG00000005014) spred2b (ENSPKIG00000004984) meis1b (ENSPKIG00000004887) ENSPKIG00000004813 pno1 (ENSPKIG00000004780) PPP3R1 (ENSPKIG00000004748) PLEK (ENSPKIG00000004709) Osteoglossiformes ANCESTRAL SPECIES ENSGT00940000153464.B.z.a.b ##22 Asian bonytongue MODERN SPECIES 19 ENSSFOG00015030330 ENSSFOG00015012043 vrk2 (ENSSFOG00015011998) fancl (ENSSFOG00015011964) bcl11aa (ENSSFOG00015026685) papolg (ENSSFOG00015011874) rel (ENSSFOG00015011855) pex13 (ENSSFOG00015026130) SANBR (ENSSFOG00015011799) ENSSFOG00015011598 B3GNT2 (ENSSFOG00015024343) EHBP1 (ENSSFOG00015011508) otx1 (ENSSFOG00015011487) WDPCP (ENSSFOG00015027973) MDH1 (ENSSFOG00015011431) ugp2a (ENSSFOG00015011405) ##22 ENSSFOG00015032922 ENSSFOG00015011260 lgalsla (ENSSFOG00015028463) ENSSFOG00015027086 ENSSFOG00015011233 ENSSFOG00015028900 SLC1A4 (ENSSFOG00015011220) cep68 (ENSSFOG00015028803) ENSSFOG00015032633 zgc:153169 (ENSSFOG00015011091) ACTR2 (ENSSFOG00015011048) SPRED2 (ENSSFOG00015032832) ENSSFOG00015010893 c1d (ENSSFOG00015010861) dnaaf10 (ENSSFOG00015010775) Clupeocephala ANCESTRAL SPECIES 37 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.j ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000155078.a.b.a.a ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00390000001858 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT00940000154556 ENSGT00940000156841.a.a ENSGT00940000156327.l Otomorpha ANCESTRAL SPECIES 102 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.j ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263891 ENSGT01100000263985 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00940000156258.f.b ENSGT00390000008808.r.a ENSGT00940000157923 ENSGT00950000182886.b.a.b ENSGT01100000263621 ENSGT01100000263833 ENSGT00990000205529 ENSGT00940000160148 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 Clupeiformes ANCESTRAL SPECIES 107 ENSGT00940000158966 ENSGT00390000002789 ENSGT00980000199991 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT01100000263985 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00940000156258.f.b ENSGT00390000008808.r.a ENSGT00940000157923 ENSGT00950000182886.b.a.b ENSGT01100000263833 ENSGT00990000205529 ENSGT00940000160148 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a ENSGT00390000007046.a ENSGT00940000170452 ENSGT00390000010591 ENSGT00390000012248 Atlantic herring MODERN SPECIES 16 ENSCHAG00000011433 ENSCHAG00000011487 ENSCHAG00000011505 ENSCHAG00000011574 ENSCHAG00000011591 ENSCHAG00000011592 ENSCHAG00000011595 parn (ENSCHAG00000011635) ENSCHAG00000013458 pla2g10 (ENSCHAG00000013463) txndc11 (ENSCHAG00000013477) commd1 (ENSCHAG00000013763) ENSCHAG00000013786 otx2a (ENSCHAG00000013814) mdh1aa (ENSCHAG00000013826) ugp2a (ENSCHAG00000013924) ##22 spast (ENSCHAG00000014615) dpy30 (ENSCHAG00000014771) psen2 (ENSCHAG00000014780) srd5a2a (ENSCHAG00000014835) ENSCHAG00000014846 ENSCHAG00000014858 ENSCHAG00000014864 ENSCHAG00000014897 ENSCHAG00000014923 ENSCHAG00000015151 ENSCHAG00000015269 ENSCHAG00000015926 ENSCHAG00000016053 ENSCHAG00000016122 ENSCHAG00000016196 Denticle herring MODERN SPECIES 13 ENSDCDG00000026975 ENSDCDG00000026972 rps27a (ENSDCDG00000026958) mtif2 (ENSDCDG00000026721) vwa5a (ENSDCDG00000026699) ENSDCDG00000026694 ENSDCDG00000026693 ENSDCDG00000026690 ENSDCDG00000026688 cdc37 (ENSDCDG00000026687) PDE4A (ENSDCDG00000023977) ENSDCDG00000022745 ears2 (ENSDCDG00000022705) otx2a (ENSDCDG00000022691) mdh1aa (ENSDCDG00000022686) ugp2a (ENSDCDG00000022675) ##22 spast (ENSDCDG00000021452) dpy30 (ENSDCDG00000021410) psen2 (ENSDCDG00000021405) srd5a2a (ENSDCDG00000021383) MFAP4 (ENSDCDG00000021372) ENSDCDG00000021369 ENSDCDG00000021368 JAG1 (ENSDCDG00000019752) btbd3a (ENSDCDG00000019694) esf1 (ENSDCDG00000019682) ndufaf5 (ENSDCDG00000019426) KIF16B (ENSDCDG00000017854) snrpb2 (ENSDCDG00000017806) ENSDCDG00000017804 ENSDCDG00000017802 Otophysi ANCESTRAL SPECIES 28 ENSGT01100000263977 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263891 ENSGT01100000263985 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00530000063410.a.r ENSGT00940000153464.B.z.a ##22 ENSGT00940000156258.f.b ENSGT00390000008808.r.a ENSGT00940000157923 ENSGT00950000182886.b.a.b ENSGT01100000263833 ENSGT00990000205529 ENSGT00940000160148 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a Characiphysae ANCESTRAL SPECIES 32 ENSGT01100000266716 ENSGT00990000204616 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a.e ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263891 ENSGT01100000263985 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00940000156258.f.b ENSGT00390000008808.r.a ENSGT00940000157923 ENSGT00950000182886.b.a.b ENSGT01100000263833 ENSGT00990000205529 ENSGT00940000160148 ENSGT00940000156461 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162977 ENSGT00390000011529 ENSGT00940000156048.e.b.b ENSGT00390000003512.r Channel catfish MODERN SPECIES 18 ENSIPUG00000024375 ifngr1 (ENSIPUG00000024376) ENSIPUG00000024377 b3gnt2a (ENSIPUG00000024378) Commd1 (ENSIPUG00000024384) ENSIPUG00000024386 USP34 (ENSIPUG00000024387) XPO1 (ENSIPUG00000024394) ENSIPUG00000024404 ENSIPUG00000024406 cct4 (ENSIPUG00000024407) pus10 (ENSIPUG00000005627) ENSIPUG00000005709 otx1 (ENSIPUG00000005796) mdh1aa (ENSIPUG00000005818) UGP2 (ENSIPUG00000005867) ##22 spast (ENSIPUG00000005926) rln3 (ENSIPUG00000005954) RFX1 (ENSIPUG00000005967) dcaf15 (ENSIPUG00000006001) smdt1b (ENSIPUG00000006057) ENSIPUG00000006062 dla (ENSIPUG00000006099) RHOU (ENSIPUG00000006151) ENSIPUG00000006186 acta1a (ENSIPUG00000006203) nup133 (ENSIPUG00000006226) ENSIPUG00000006313 ndufaf5 (ENSIPUG00000006437) ENSIPUG00000006477 ENSIPUG00000006494 Characiphysae_b ANCESTRAL SPECIES 49 ENSGT00390000002789 ENSGT01100000266716 ENSGT00990000204616 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a.e ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00940000156258.f.b ENSGT00390000008808.r.a ENSGT00940000157923 ENSGT00950000182886.b.a.b ENSGT01100000263833 ENSGT00990000205529 ENSGT00940000160148 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a ENSGT00390000011529 ENSGT00940000156048.e.b.b ENSGT00390000003512.r ENSGT00940000156644.e.a Characoidei ANCESTRAL SPECIES 54 ENSGT00980000199991 ENSGT00390000002789 ENSGT00990000204616 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a.e ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00940000156258.f.b ENSGT00390000008808.r.a ENSGT00940000157923 ENSGT00950000182886.b.a.b ENSGT00990000205529 ENSGT00940000160148 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a ENSGT00390000011529 ENSGT00940000156048.e.b.b ENSGT00390000003512.r ENSGT00940000156644.e.a ENSGT00940000159781.b Mexicana tetra MODERN SPECIES 3 ltv1 (ENSAMXG00000003235) ifngr1 (ENSAMXG00000032169) ENSAMXG00000003141 pus10 (ENSAMXG00000003093) cct4 (ENSAMXG00000003076) FAM161A (ENSAMXG00000003072) ENSAMXG00000029769 ENSAMXG00000003069 USP34 (ENSAMXG00000002913) ENSAMXG00000042452 commd1 (ENSAMXG00000039464) b3gnt2a (ENSAMXG00000035776) ENSAMXG00000029375 otx2a (ENSAMXG00000043592) mdh1aa (ENSAMXG00000002785) ugp2a (ENSAMXG00000002756) ##22 spast (ENSAMXG00000033738) dpy30 (ENSAMXG00000002700) psen2 (ENSAMXG00000002667) srd5a2a (ENSAMXG00000031911) ENSAMXG00000035391 JAG1 (ENSAMXG00000018695) btbd3a (ENSAMXG00000029257) esf1 (ENSAMXG00000001172) ndufaf5 (ENSAMXG00000001169) KIF16B (ENSAMXG00000001161) nup133 (ENSAMXG00000032478) acta1a (ENSAMXG00000003516) ENSAMXG00000040470 RHOU (ENSAMXG00000031485) dla (ENSAMXG00000001138) Red-bellied piranha MODERN SPECIES 277 ENSPNAG00000013931 pus10 (ENSPNAG00000014003) cct4 (ENSPNAG00000014071) FAM161A (ENSPNAG00000003027) XPO1 (ENSPNAG00000014209) USP34 (ENSPNAG00000003107) b3gnt2a (ENSPNAG00000003115) commd1 (ENSPNAG00000014415) ENSPNAG00000014436 otx2a (ENSPNAG00000014450) mdh1aa (ENSPNAG00000003135) ugp2a (ENSPNAG00000014483) ##22 spast (ENSPNAG00000014543) dpy30 (ENSPNAG00000014561) psen2 (ENSPNAG00000003175) ENSPNAG00000014575 ENSPNAG00000003181 srd5a2a (ENSPNAG00000014591) JAG1 (ENSPNAG00000014680) btbd3a (ENSPNAG00000014712) esf1 (ENSPNAG00000014721) ndufaf5 (ENSPNAG00000003247) KIF16B (ENSPNAG00000014856) nup133 (ENSPNAG00000014963) ENSPNAG00000014981 acta1a (ENSPNAG00000014989) ENSPNAG00000014995 Electric eel MODERN SPECIES 208 ltv1 (ENSEEEG00000017049) ENSEEEG00000017050 ENSEEEG00000017051 ENSEEEG00000017054 ENSEEEG00000017055 pus10 (ENSEEEG00000017062) cct4 (ENSEEEG00000017085) ENSEEEG00000017089 XPO1 (ENSEEEG00000017098) ENSEEEG00000017201 commd1 (ENSEEEG00000017203) b3gnt2a (ENSEEEG00000017205) ENSEEEG00000017208 otx2a (ENSEEEG00000017211) mdh1aa (ENSEEEG00000017217) ugp2a (ENSEEEG00000017229) ##22 spast (ENSEEEG00000017258) dpy30 (ENSEEEG00000017434) psen2 (ENSEEEG00000017435) srd5a2a (ENSEEEG00000017437) ENSEEEG00000017438 ENSEEEG00000017439 JAG1 (ENSEEEG00000017441) btbd3a (ENSEEEG00000017451) esf1 (ENSEEEG00000017455) ndufaf5 (ENSEEEG00000017461) KIF16B (ENSEEEG00000017487) nup133 (ENSEEEG00000017641) acta1a (ENSEEEG00000018302) ENSEEEG00000018756 RHOU (ENSEEEG00000018758) Cyprinoidei ANCESTRAL SPECIES 30 ENSGT00940000154950.y.a ENSGT00940000164073.a ENSGT00390000009613.b ENSGT00940000159025 ENSGT00940000166376 ENSGT00940000156633.d.a ENSGT00940000175002 ENSGT00940000165755.b.f ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT01030000234528.A.a.a ENSGT00570000079168.b.b.b ENSGT00390000004396.h ENSGT00940000156171.h ENSGT00940000167432 ENSGT00940000153464.B.z.a ##22 ENSGT00940000156258.f.b ENSGT00390000008808.r.a ENSGT00940000157923 ENSGT00950000182886.b.a.b ENSGT01100000263833 ENSGT00990000205529 ENSGT00940000160148 ENSGT00940000167000 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000162838.g.a ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000154556.c.a ENSGT00940000156841.a.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 643 ENSGT00940000165755.b.e.b ENSGT00940000158189.t.b.a ENSGT00950000183033.a.b.a.oc ENSGT01030000234528.A.a.a ENSGT00570000079168.b.b.b.bb.b ENSGT00940000167432.h ENSGT00530000063410.a.r.d.a ENSGT00940000153464.B.z.a.c ##22 ENSGT00940000156258.f.b.d ENSGT00390000008808.r.a.a.b ENSGT00940000157923.g ENSGT00950000182886.b.a.b.a.b ENSGT00940000166212.t.b ENSGT00940000167000.e ENSGT00390000014687.a.a.b Goldfish DUPLICATION Goldfish MODERN SPECIES 18 ENSCARG00000004069 sgms2a (ENSCARG00000004057) cyp2u1 (ENSCARG00000004040) hadh (ENSCARG00000003991) lef1 (ENSCARG00000003902) ENSCARG00000036990 tsga10 (ENSCARG00000036965) slkb (ENSCARG00000031145) ENSCARG00000030985 herc3 (ENSCARG00000030707) FAM13A (ENSCARG00000029249) zgc:154142 (ENSCARG00000029126) ENSCARG00000029115 otx2a (ENSCARG00000029112) mdh1aa (ENSCARG00000029087) ugp2a (ENSCARG00000029029) ##22 spast (ENSCARG00000026789) dpy30 (ENSCARG00000026669) psen2 (ENSCARG00000026635) srd5a2a (ENSCARG00000026622) jag1a (ENSCARG00000026184) btbd3a (ENSCARG00000026072) ndufaf5 (ENSCARG00000025013) KIF16B (ENSCARG00000024504) MAST1 (ENSCARG00000024092) atg4da (ENSCARG00000024045) actr2a (ENSCARG00000023942) SPRED2 (ENSCARG00000023931) meis1a (ENSCARG00000023885) etaa1a (ENSCARG00000023863) ppp3r1b (ENSCARG00000023762) Goldfish MODERN SPECIES 18 fam184b (ENSCARG00000010832) ENSCARG00000010811 ENSCARG00000010803 ENSCARG00000010744 ppm1kb (ENSCARG00000010702) abcg2d (ENSCARG00000010433) pkd2 (ENSCARG00000009969) slkb (ENSCARG00000009791) ENSCARG00000009769 herc3 (ENSCARG00000009456) FAM13A (ENSCARG00000007673) zgc:154142 (ENSCARG00000007549) ENSCARG00000007542 otx2a (ENSCARG00000007534) mdh1aa (ENSCARG00000007286) ugp2a (ENSCARG00000007151) ##22 spast (ENSCARG00000006917) dpy30 (ENSCARG00000006863) psen2 (ENSCARG00000006834) srd5a2a (ENSCARG00000006822) jag1a (ENSCARG00000005491) btbd3a (ENSCARG00000005384) ndufaf5 (ENSCARG00000005360) KIF16B (ENSCARG00000004399) MAST1 (ENSCARG00000004083) atg4da (ENSCARG00000004028) actr2a (ENSCARG00000003899) SPRED2 (ENSCARG00000003861) meis1a (ENSCARG00000017082) etaa1a (ENSCARG00000017051) ppp3r1b (ENSCARG00000016973) Cyprininae_a ANCESTRAL SPECIES 64 ENSGT00390000004446.i.a ENSGT00940000157370.b.g ENSGT00940000157714.k ENSGT00940000159984.a ENSGT00940000159660.j.a ENSGT00940000163031.b.a.a.a ENSGT00940000159205.eb ENSGT00940000156184.a.d ENSGT00940000165755.b.e.b ENSGT00940000158189.t.b.a ENSGT00950000183033.a.b.a.oc ENSGT01030000234528.A.a.a ENSGT00570000079168.b.b.b.bb.b ENSGT00940000167432.h ENSGT00530000063410.a.r.d.a ENSGT00940000153464.B.z.a.c ##22 ENSGT00940000156258.f.b.d ENSGT00390000008808.r.a.a.b ENSGT00940000157923.g ENSGT00950000182886.b.a.b.a.a ENSGT00990000205529.a.b ENSGT00940000166212.t.b ENSGT00940000167000.e ENSGT00390000004881.dc ENSGT00390000014687.a.a.a ENSGT00940000162838.g.a.a ENSGT00940000157700.c.s ENSGT00530000063000.a.a.b.j.b ENSGT00940000154556.c.a.a.a ENSGT00940000156841.a.b.h.b ENSGT00940000156327.l.j.b.b Common carp reference MODERN SPECIES 27 lef1 (ENSCCRG00000073428) ENSCCRG00000000290 tsga10 (ENSCCRG00000000253) slkb (ENSCCRG00000037660) col17a1a (ENSCCRG00000073322) ENSCCRG00000066863 herc3 (ENSCCRG00000022882) FAM13A (ENSCCRG00000072001) zgc:154142 (ENSCCRG00000015426) ENSCCRG00000068508 ENSCCRG00000009748 otx2a (ENSCCRG00000063692) mdh1aa (ENSCCRG00000017220) ENSCCRG00000070834 ENSCCRG00000077367 ugp2a (ENSCCRG00000017797) ##22 spast (ENSCCRG00000017826) psen2 (ENSCCRG00000024514) srd5a2a (ENSCCRG00000069049) ENSCCRG00000082226 jag1a (ENSCCRG00000005091) btbd3a (ENSCCRG00000082381) esf1 (ENSCCRG00000004790) ndufaf5 (ENSCCRG00000041111) ENSCCRG00000082256 ENSCCRG00000033365 atg4da (ENSCCRG00000070945) actr2a (ENSCCRG00000000090) meis1a (ENSCCRG00000000669) ENSCCRG00000052788 etaa1a (ENSCCRG00000000686) Golden-line barbel MODERN SPECIES 182 gstcd (ENSSGRG00000007106) sgms2a (ENSSGRG00000007104) cyp2u1 (ENSSGRG00000007103) hadh (ENSSGRG00000007044) lef1 (ENSSGRG00000007033) ENSSGRG00000007027 tsga10 (ENSSGRG00000007018) slkb (ENSSGRG00000006742) herc3 (ENSSGRG00000006528) ENSSGRG00000006526 FAM13A (ENSSGRG00000005009) zgc:154142 (ENSSGRG00000004975) ENSSGRG00000004970 otx2a (ENSSGRG00000004968) mdh1aa (ENSSGRG00000002310) ugp2a (ENSSGRG00000002285) ##22 spast (ENSSGRG00000002284) dpy30 (ENSSGRG00000002277) psen2 (ENSSGRG00000002276) ENSSGRG00000002274 ENSSGRG00000002273 ENSSGRG00000002272 jag1a (ENSSGRG00000001079) btbd3a (ENSSGRG00000001070) esf1 (ENSSGRG00000001068) ndufaf5 (ENSSGRG00000001065) KIF16B (ENSSGRG00000000664) MAST1 (ENSSGRG00000000324) atg4da (ENSSGRG00000000210) ACTR2 (ENSSGRG00000000200) SPRED2 (ENSSGRG00000000188) Cyprininae ANCESTRAL SPECIES 38 ENSGT00940000157370.b.h ENSGT00940000157714.l ENSGT00940000159984.b ENSGT00940000159660.j.b ENSGT00940000163031.b.a.a.b ENSGT00940000159205.db ENSGT00940000156184.a.c ENSGT00940000168136 ENSGT00980000198902 ENSGT00940000165755.b.e.a ENSGT00940000158189.t.a ENSGT00950000183033.a.b.a.nc ENSGT00570000079168.b.b.b.bb.a ENSGT00940000167432.g ENSGT00530000063410.a.r.d.b ENSGT00940000153464.B.z.a.d ##22 ENSGT00940000156258.f.b.c ENSGT00390000008808.r.a.a.a ENSGT00940000157923.h ENSGT00950000182886.b.a.b.b ENSGT01100000263833 ENSGT00990000205529.b ENSGT00940000160148 ENSGT00940000167000.f ENSGT00390000004881 ENSGT00390000014687.b ENSGT00940000162838.g.a.b ENSGT00940000157700.c.t ENSGT00530000063000.a.a.b.j.a ENSGT00940000154556.c.a.b ENSGT00940000156841.a.b.h.a.a Goldfish MODERN SPECIES tbck (ENSCARG00000000449) npnta (ENSCARG00000000477) gstcd (ENSCARG00000000525) sgms2a (ENSCARG00000000571) lef1 (ENSCARG00000000579) ENSCARG00000000592 tsga10 (ENSCARG00000000604) slkb (ENSCARG00000000832) ENSCARG00000001554 ENSCARG00000001579 herc3 (ENSCARG00000001667) FAM13A (ENSCARG00000001731) ENSCARG00000001797 otx2a (ENSCARG00000001799) mdh1aa (ENSCARG00000001809) ugp2a (ENSCARG00000001834) ##22 spast (ENSCARG00000001881) dpy30 (ENSCARG00000002592) psen2 (ENSCARG00000002597) ENSCARG00000002608 srd5a2a (ENSCARG00000002614) ENSCARG00000002617 ENSCARG00000002623 jag1a (ENSCARG00000002668) btbd3a (ENSCARG00000003298) ENSCARG00000003302 ENSCARG00000003425 MAST1 (ENSCARG00000006590) atg4da (ENSCARG00000007311) actr2a (ENSCARG00000007339) SPRED2 (ENSCARG00000007433) Cyprininae_a ANCESTRAL SPECIES 66 ENSGT00940000157370.b.h ENSGT00940000157714.l ENSGT00940000159984.b ENSGT00940000159660.j.b ENSGT00940000163031.b.a.a.b ENSGT00940000159205.db ENSGT00940000156184.a.c ENSGT00940000168136 ENSGT00980000198902 ENSGT00940000165755.b.e.a ENSGT00940000158189.t.a ENSGT00950000183033.a.b.a.nc ENSGT00570000079168.b.b.b.bb.a ENSGT00940000167432.g ENSGT00530000063410.a.r.d.b ENSGT00940000153464.B.z.a.d ##22 ENSGT00940000156258.f.b.c ENSGT00390000008808.r.a.a.a ENSGT00940000157923.h ENSGT00950000182886.b.a.b.b ENSGT01100000263833 ENSGT00990000205529.b ENSGT00940000160148 ENSGT00940000167000.f ENSGT00390000004881.cc ENSGT00390000014687.b ENSGT00940000162838.g.a.b ENSGT00940000157700.c.t ENSGT00530000063000.a.a.b.j.a ENSGT00940000154556.c.a.b ENSGT00940000156841.a.b.h.a.a Common carp reference MODERN SPECIES 22 sgms2a (ENSCCRG00000008752) cyp2u1 (ENSCCRG00000067421) hadh (ENSCCRG00000008946) lef1 (ENSCCRG00000054171) ENSCCRG00000074534 tsga10 (ENSCCRG00000051824) slkb (ENSCCRG00000017145) col17a1a (ENSCCRG00000069314) ENSCCRG00000037746 ENSCCRG00000037889 herc3 (ENSCCRG00000015479) FAM13A (ENSCCRG00000053503) ENSCCRG00000045974 otx2a (ENSCCRG00000079168) mdh1aa (ENSCCRG00000054336) ugp2a (ENSCCRG00000017630) ##22 spast (ENSCCRG00000017684) dpy30 (ENSCCRG00000024555) psen2 (ENSCCRG00000053893) srd5a2a (ENSCCRG00000028967) ENSCCRG00000076817 jag1a (ENSCCRG00000028961) btbd3a (ENSCCRG00000057036) esf1 (ENSCCRG00000020205) ndufaf5 (ENSCCRG00000053140) ENSCCRG00000064320 ENSCCRG00000061116 atg4da (ENSCCRG00000053920) actr2a (ENSCCRG00000082302) ENSCCRG00000073155 meis1a (ENSCCRG00000000380) Golden-line barbel MODERN SPECIES 50 npnta (ENSSGRG00000013845) gstcd (ENSSGRG00000013856) sgms2a (ENSSGRG00000013867) cyp2u1 (ENSSGRG00000013868) hadh (ENSSGRG00000013869) lef1 (ENSSGRG00000013870) tsga10 (ENSSGRG00000013886) slkb (ENSSGRG00000013889) ENSSGRG00000014135 ENSSGRG00000014136 herc3 (ENSSGRG00000014158) FAM13A (ENSSGRG00000014549) ENSSGRG00000014554 ENSSGRG00000014557 otx2a (ENSSGRG00000014559) ugp2a (ENSSGRG00000014565) ##22 spast (ENSSGRG00000014891) dpy30 (ENSSGRG00000014907) psen2 (ENSSGRG00000014911) srd5a2a (ENSSGRG00000014942) ENSSGRG00000014993 ENSSGRG00000014994 JAG1 (ENSSGRG00000014998) btbd3a (ENSSGRG00000015452) ndufaf5 (ENSSGRG00000015458) KIF16B (ENSSGRG00000015518) MAST1 (ENSSGRG00000015521) atg4da (ENSSGRG00000015527) actr2a (ENSSGRG00000015543) SPRED2 (ENSSGRG00000015617) meis1a (ENSSGRG00000015623) Zebrafish MODERN SPECIES tbck (ENSDARG00000013667) aimp1a (ENSDARG00000060036) dkk2 (ENSDARG00000076420) papss1 (ENSDARG00000057099) pkd2 (ENSDARG00000014098) abcg2d (ENSDARG00000016818) ppm1kb (ENSDARG00000010655) ENSDARG00000075785 herc3 (ENSDARG00000075887) FAM13A (ENSDARG00000075564) ENSDARG00000116732 zgc:154142 (ENSDARG00000100792) ENSDARG00000075043 otx2a (ENSDARG00000030703) mdh1aa (ENSDARG00000017772) ugp2a (ENSDARG00000005578) ##22 spast (ENSDARG00000024933) dpy30 (ENSDARG00000004427) psen2 (ENSDARG00000015540) srd5a2a (ENSDARG00000043587) jag1a (ENSDARG00000030289) btbd3a (ENSDARG00000005544) esf1 (ENSDARG00000008740) ndufaf5 (ENSDARG00000061629) KIF16B (ENSDARG00000100225) MAST1 (ENSDARG00000027497) atg4da (ENSDARG00000043548) actr2a (ENSDARG00000052438) SPRED2 (ENSDARG00000052435) meis1a (ENSDARG00000002937) etaa1a (ENSDARG00000074915) Euteleosteomorpha ANCESTRAL SPECIES 18 ENSGT00990000204616 ENSGT01100000263977 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00390000001858 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000155078.a.b.a.b ENSGT00940000154958 ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.ab ENSGT00940000156530.c.`b.a Acanthomorphata ANCESTRAL SPECIES 78 ENSGT00990000204616 ENSGT01100000263977 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00390000001858 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.ab ENSGT00940000156530.c.`b.a Euacanthomorphacea ANCESTRAL SPECIES 37 ENSGT00990000204616 ENSGT01100000263977 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00390000001858 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.ab ENSGT00940000156530.c.`b.a Percomorphaceae ANCESTRAL SPECIES 37 ENSGT00990000204616 ENSGT01100000263977 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00390000001858 ENSGT00940000154186.a.r ENSGT00940000154958 ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.ab ENSGT01030000235154 ENSGT00940000156530.c.`b.a Tiger tail seahorse MODERN SPECIES 966 ugp2a (ENSHCOG00000017223) ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00530000067736 ENSGT01100000263977 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT00950000182772.A.b ENSGT00940000157560.d.a ENSGT00940000155710.b Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00990000213804 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT01100000263529.a.a.a.b.a.a.b ENSGT00950000182772.A.b ENSGT00940000157560.d.a Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00990000213804 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT01100000263529.a.a.a.b.a.a.b ENSGT00950000182772.A.b ENSGT00940000157560.d.a Anabantaria ANCESTRAL SPECIES 1 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00990000213804 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT01100000263529.a.a.a.b.a.a.b ENSGT00950000182772.A.b ENSGT00940000157560.d.a Anabantoidei ANCESTRAL SPECIES ENSGT01100000263977 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT01100000263529.a.a.a.b.a.a.b ENSGT00950000182772.A.b ENSGT00940000157560.d.a Climbing perch MODERN SPECIES ENSATEG00000028029 ENSATEG00000029692 ENSATEG00000029425 ENSATEG00000028887 ENSATEG00000026690 ENSATEG00000028134 ENSATEG00000025940 ENSATEG00000026371 ENSATEG00000019721 ENSATEG00000008847 ENSATEG00000030116 ENSATEG00000026705 ENSATEG00000019677 otx2a (ENSATEG00000019664) MDH1 (ENSATEG00000019629) ugp2a (ENSATEG00000019600) ##22 VPS54 (ENSATEG00000019507) ENSATEG00000019473 ENSATEG00000019441 LGALSL (ENSATEG00000019405) ENSATEG00000025975 pgap4 (ENSATEG00000019383) ENSATEG00000019275 ENSATEG00000019207 ENSATEG00000019183 rcor3 (ENSATEG00000019156) ENSATEG00000029533 ENSATEG00000019132 ENSATEG00000019034 ENSATEG00000017567 ENSATEG00000017437 Zig-zag eel MODERN SPECIES ENSMAMG00000000476 ENSMAMG00000000385 pus10 (ENSMAMG00000023048) cct4 (ENSMAMG00000023044) ENSMAMG00000023042 ENSMAMG00000024634 XPO1 (ENSMAMG00000023037) USP34 (ENSMAMG00000023021) ENSMAMG00000023018 ENSMAMG00000025622 commd1 (ENSMAMG00000027465) b3gnt2a (ENSMAMG00000023014) ENSMAMG00000026920 otx2a (ENSMAMG00000023012) ENSMAMG00000023011 ugp2a (ENSMAMG00000023010) ##22 ENSMAMG00000028651 ENSMAMG00000023004 ENSMAMG00000023000 ENSMAMG00000022996 ENSMAMG00000022995 ENSMAMG00000028526 ENSMAMG00000027183 ENSMAMG00000022992 pgap4 (ENSMAMG00000022991) ENSMAMG00000022984 ENSMAMG00000022979 ENSMAMG00000022978 Carangaria ANCESTRAL SPECIES ENSGT00530000067736 ENSGT01100000263977 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000018035 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT01100000263529.a.a.a.b.a.a.b ENSGT00950000182772.A.b ENSGT00940000157560.d.a Carangaria_A ANCESTRAL SPECIES 42 ENSGT00530000067736 ENSGT01100000263977 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000018035 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT01100000263529.a.a.a.b.a.a.b ENSGT00950000182772.A.b ENSGT00940000157560.d.a Seriola ANCESTRAL SPECIES 80 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT01100000263529.a.a.a.b.a.a.b.i ENSGT01100000263529.a.a.a.b.a.a.b.j ENSGT00950000182772.A.b Greater amberjack MODERN SPECIES 116 commd1 (ENSSDUG00000017834) b3gnt2a (ENSSDUG00000017840) ENSSDUG00000017852 otx2a (ENSSDUG00000017869) ENSSDUG00000017882 mdh1aa (ENSSDUG00000017899) ugp2a (ENSSDUG00000017927) ##22 vps54 (ENSSDUG00000017966) ENSSDUG00000018103 slc29a2 (ENSSDUG00000018120) lgalsla (ENSSDUG00000018145) MAL (ENSSDUG00000018154) pgap4 (ENSSDUG00000018157) tpcn3 (ENSSDUG00000018167) ENSSDUG00000018199 ENSSDUG00000018257 kcnh1b (ENSSDUG00000018286) rcor3 (ENSSDUG00000018349) ENSSDUG00000018394 ENSSDUG00000018420 ENSSDUG00000018459 ENSSDUG00000018473 Yellowtail amberjack MODERN SPECIES 2859 MDH1 (ENSSLDG00000020534) ugp2a (ENSSLDG00000020951) ##22 vps54 (ENSSLDG00000021001) Barramundi perch MODERN SPECIES 62 ltv1 (ENSLCAG00010027708) ENSLCAG00010027709 ENSLCAG00010027710 cct4 (ENSLCAG00010027712) ENSLCAG00010027715 ENSLCAG00010027720 ENSLCAG00010027721 XPO1 (ENSLCAG00010027722) USP34 (ENSLCAG00010027723) ENSLCAG00010027726 commd1 (ENSLCAG00010027727) b3gnt2a (ENSLCAG00010027728) ENSLCAG00010027729 otx2a (ENSLCAG00010027730) mdh1aa (ENSLCAG00010027731) ugp2a (ENSLCAG00010027732) ##22 ENSLCAG00010027736 ifrd2 (ENSLCAG00010027738) amt (ENSLCAG00010027739) hyal3 (ENSLCAG00010027740) NAA80 (ENSLCAG00010027741) prkar2aa (ENSLCAG00010027743) mgll (ENSLCAG00010027745) SLC26A6 (ENSLCAG00010027746) ENSLCAG00010027750 wdr6 (ENSLCAG00010027751) CELSR3 (ENSLCAG00010027757) dalrd3 (ENSLCAG00010027776) impdh2 (ENSLCAG00010027787) arih2 (ENSLCAG00010027800) xpc (ENSLCAG00010027804) Pleuronectoidei ANCESTRAL SPECIES 26 ENSGT00940000158966 ENSGT00940000177040 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000018035 ENSGT00390000012029 ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT00950000182772.A.b ENSGT00940000157560.d.a ENSGT00940000155710.b Tongue sole MODERN SPECIES 19 dctd (ENSCSEG00000010821) CCSAP (ENSCSEG00000010817) ACTA1 (ENSCSEG00000010802) ENSCSEG00000010795 nup133 (ENSCSEG00000010705) taf5l (ENSCSEG00000010683) capn9 (ENSCSEG00000010637) ENSCSEG00000010630 ltv1 (ENSCSEG00000010617) ifngr1 (ENSCSEG00000010604) ENSCSEG00000010124 ENSCSEG00000010083 vps54 (ENSCSEG00000010003) commd1 (ENSCSEG00000009966) MDH1 (ENSCSEG00000009948) ugp2a (ENSCSEG00000009922) ##22 cdc6 (ENSCSEG00000009911) ENSCSEG00000009897 lef1 (ENSCSEG00000009871) ENSCSEG00000009844 casp6a (ENSCSEG00000009858) pla2g12a (ENSCSEG00000009836) dnajb14 (ENSCSEG00000009833) TTC39B (ENSCSEG00000009806) snapc3 (ENSCSEG00000009790) PSIP1 (ENSCSEG00000009731) bnc2 (ENSCSEG00000009710) sh3gl2a (ENSCSEG00000009692) ENSCSEG00000009669 trmo (ENSCSEG00000009666) anp32b (ENSCSEG00000009653) Turbot MODERN SPECIES 20 ENSSMAG00000020890 ltv1 (ENSSMAG00000020883) ENSSMAG00000020896 ENSSMAG00000021025 pus10 (ENSSMAG00000021017) cct4 (ENSSMAG00000021011) ENSSMAG00000031303 ENSSMAG00000021008 XPO1 (ENSSMAG00000021007) ENSSMAG00000021005 ENSSMAG00000037283 commd1 (ENSSMAG00000021003) ENSSMAG00000021002 otx2a (ENSSMAG00000020996) MDH1 (ENSSMAG00000021087) ugp2a (ENSSMAG00000021088) ##22 VPS54 (ENSSMAG00000021089) ENSSMAG00000021091 ENSSMAG00000021093 LGALSL (ENSSMAG00000023252) ENSSMAG00000021095 pgap4 (ENSSMAG00000021151) ENSSMAG00000035115 ENSSMAG00000029348 ENSSMAG00000021152 ENSSMAG00000034132 ENSSMAG00000021153 ENSSMAG00000021154 ENSSMAG00000021155 rcor3 (ENSSMAG00000021156) ENSSMAG00000021157 Eupercaria ANCESTRAL SPECIES 2 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00990000213804 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT00940000155078.a.b.a.a ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.`b.a ENSGT00390000004284.f Tetraodontidae ANCESTRAL SPECIES 178 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154186.a.r Tetraodon MODERN SPECIES 26 CDK19 (ENSTNIG00000002752) amd1 (ENSTNIG00000002750) amd1 (ENSTNIG00000002751) rpf2 (ENSTNIG00000002749) ENSTNIG00000002748 ENSTNIG00000001539 ENSTNIG00000002745 ENSTNIG00000002744 ENSTNIG00000002739 ndufaf5 (ENSTNIG00000002738) gas8 (ENSTNIG00000002737) ENSTNIG00000002736 snrpb2 (ENSTNIG00000002735) otx2a (ENSTNIG00000002734) mdh1aa (ENSTNIG00000002733) ugp2a (ENSTNIG00000002732) ##22 vps54 (ENSTNIG00000002731) slc29a2 (ENSTNIG00000002730) ENSTNIG00000001751 ENSTNIG00000002729 PIK3R4 (ENSTNIG00000002727) ENSTNIG00000002726 ENSTNIG00000002725 cenatac (ENSTNIG00000002724) eno3 (ENSTNIG00000002719) trappc1 (ENSTNIG00000001354) ENSTNIG00000002718 ENSTNIG00000001909 ENSTNIG00000002717 ift46 (ENSTNIG00000002716) ENSTNIG00000000419 Fugu MODERN SPECIES 8 ENSTRUG00000030871 ENSTRUG00000028140 gtpbp2b (ENSTRUG00000010665) tp53bp2b (ENSTRUG00000010361) rrp36 (ENSTRUG00000021893) ENSTRUG00000023709 map1lc3c (ENSTRUG00000010294) strn (ENSTRUG00000009886) btbd3a (ENSTRUG00000009813) ndufaf5 (ENSTRUG00000009337) ENSTRUG00000009141 ENSTRUG00000009228 snrpb2 (ENSTRUG00000009060) otx2a (ENSTRUG00000020433) mdh1aa (ENSTRUG00000008840) ugp2a (ENSTRUG00000008604) ##22 vps54 (ENSTRUG00000008328) ENSTRUG00000008203 slc29a2 (ENSTRUG00000007976) lgalsla (ENSTRUG00000007880) aftpha (ENSTRUG00000021951) ENSTRUG00000025352 ENSTRUG00000033070 ENSTRUG00000007617 slit1b (ENSTRUG00000006451) ENSTRUG00000006194 MORN4 (ENSTRUG00000006096) hoga1 (ENSTRUG00000005878) cnnm1b (ENSTRUG00000033303) ENSTRUG00000029841 NKX2-3 (ENSTRUG00000003800) Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00990000213804 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT01040000240400.c.a.b.a.b.a.a.b.b ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.`b.a ENSGT00390000004284.f Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00990000213804 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.`b.a ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.a Perciformes ANCESTRAL SPECIES 2 ENSGT00390000002789 ENSGT00530000067736 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b.b ENSGT00940000155078.a.b.a.a ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.`b.a Perciformes_a ANCESTRAL SPECIES ENSGT01100000264953 ENSGT00390000002789 ENSGT00530000067736 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b.a.a ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.`b.a ENSGT00390000004284.f Channel bull blenny MODERN SPECIES XPO1 (ENSCGOG00000000002) USP34 (ENSCGOG00000000003) commd1 (ENSCGOG00000000007) b3gnt2a (ENSCGOG00000000008) ENSCGOG00000000009 otx2a (ENSCGOG00000000011) mdh1aa (ENSCGOG00000000012) ugp2a (ENSCGOG00000000013) ##22 vps54 (ENSCGOG00000000014) ENSCGOG00000000015 slc29a2 (ENSCGOG00000000016) ENSCGOG00000000017 ENSCGOG00000000018 ENSCGOG00000000019 lgalsla (ENSCGOG00000000021) aftpha (ENSCGOG00000000022) ENSCGOG00000000023 RAB1A (ENSCGOG00000000025) ENSCGOG00000000026 ENSCGOG00000000027 ENSCGOG00000000028 ENSCGOG00000000029 ACTR2 (ENSCGOG00000000030) Pike perch MODERN SPECIES 178 ENSSLUG00000013754 ENSSLUG00000013745 ENSSLUG00000013449 pus10 (ENSSLUG00000013288) cct4 (ENSSLUG00000013217) ENSSLUG00000013207 XPO1 (ENSSLUG00000009410) USP34 (ENSSLUG00000009154) ENSSLUG00000009084 ENSSLUG00000009079 commd1 (ENSSLUG00000009074) b3gnt2a (ENSSLUG00000009066) ENSSLUG00000009057 otx2a (ENSSLUG00000009049) mdh1aa (ENSSLUG00000008772) ugp2a (ENSSLUG00000007420) ##22 vps54 (ENSSLUG00000006325) ENSSLUG00000006285 slc29a2 (ENSSLUG00000006275) lgalsla (ENSSLUG00000006260) ENSSLUG00000006250 aftpha (ENSSLUG00000006238) B3GNT2 (ENSSLUG00000006228) Cottioidei ANCESTRAL SPECIES 3 ENSGT00390000002789 ENSGT00530000067736 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00940000155337.`b ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT00390000011698.c.a.b ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b.b ENSGT00940000155078.a.b.a.a ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT01030000235154 ENSGT00940000156530.c.`b.a ENSGT00390000004284.f Lumpfish MODERN SPECIES ltv1 (ENSCLMG00005015406) ENSCLMG00005015405 ENSCLMG00005015403 ENSCLMG00005015395 pus10 (ENSCLMG00005015393) cct4 (ENSCLMG00005015151) ENSCLMG00005015143 FAM161A (ENSCLMG00005015052) XPO1 (ENSCLMG00005014924) USP34 (ENSCLMG00005013361) commd1 (ENSCLMG00005013349) b3gnt2a (ENSCLMG00005013348) ENSCLMG00005013347 otx2a (ENSCLMG00005013346) mdh1aa (ENSCLMG00005013040) ugp2a (ENSCLMG00005012905) ##22 vps54 (ENSCLMG00005012756) ENSCLMG00005012752 ENSCLMG00005012751 lgalsla (ENSCLMG00005012749) ENSCLMG00005012748 aftpha (ENSCLMG00005012747) ENSCLMG00005012745 RAB1A (ENSCLMG00005012641) ENSCLMG00005012639 ACTR2 (ENSCLMG00005012519) SPRED2 (ENSCLMG00005012517) ENSCLMG00005012515 ENSCLMG00005012513 ENSCLMG00005012511 ENSCLMG00005012510 Stickleback MODERN SPECIES 4 kcnh1b (ENSGACG00000019577) rcor3 (ENSGACG00000019579) TRAF5 (ENSGACG00000019580) ENSGACG00000019581 ENSGACG00000019582 ENSGACG00000019583 ENSGACG00000019584 ENSGACG00000019589 ENSGACG00000019591 ENSGACG00000019595 ENSGACG00000019597 ENSGACG00000019598 JAG1 (ENSGACG00000019600) RRP36 (ENSGACG00000019603) mdh1aa (ENSGACG00000019606) ugp2a (ENSGACG00000019607) ##22 vps54 (ENSGACG00000019620) ENSGACG00000019626 ENSGACG00000019627 ENSGACG00000019628 ENSGACG00000019631 ENSGACG00000019632 ENSGACG00000019634 ENSGACG00000019635 ENSGACG00000019636 lgalsla (ENSGACG00000019637) ENSGACG00000019639 ENSGACG00000019641 rab1aa (ENSGACG00000019642) ACTR2 (ENSGACG00000019661) SPRED2 (ENSGACG00000019664) Eupecaria_C ANCESTRAL SPECIES 14 ENSGT01100000263977 ENSGT00770000121010 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00990000213804 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.a.a.b ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.`b.a ENSGT01040000240400.c.a.b.a.b.a.a.b.b.j ENSGT00390000004284.f Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00940000177040 ENSGT01100000264953 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000154958 ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.a.a.b ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.k ENSGT00390000009597.d ENSGT00940000156530.c.`b.a ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.a.a.a.a ENSGT00390000004284.f European seabass MODERN SPECIES 20 ENSDLAG00005031665 hoga1 (ENSDLAG00005004866) ENSDLAG00005004880 ENSDLAG00005004902 ENSDLAG00005004960 ENSDLAG00005005184 ENSDLAG00005005654 commd1 (ENSDLAG00005033691) b3gnt2a (ENSDLAG00005032538) ENSDLAG00005011667 ENSDLAG00005030008 ENSDLAG00005034687 otx2a (ENSDLAG00005006154) ENSDLAG00005006165 VPS54 (ENSDLAG00005006511) ugp2a (ENSDLAG00005006357) ##22 ENSDLAG00005006861 ENSDLAG00005029267 ENSDLAG00005028918 ENSDLAG00005006908 RAB1A (ENSDLAG00005035043) ENSDLAG00005029588 ENSDLAG00005032979 SPRED2 (ENSDLAG00005021828) ENSDLAG00005031613 ENSDLAG00005003260 ENSDLAG00005003298 ENSDLAG00005003360 ENSDLAG00005033994 ENSDLAG00005003427 ENSDLAG00005025252 Large yellow croaker MODERN SPECIES 481 ltv1 (ENSLCRG00005005488) ENSLCRG00005005486 ENSLCRG00005005485 ENSLCRG00005000905 pus10 (ENSLCRG00005000594) cct4 (ENSLCRG00005000430) ENSLCRG00005000400 ENSLCRG00005000395 XPO1 (ENSLCRG00005000379) USP34 (ENSLCRG00005000282) commd1 (ENSLCRG00005000214) b3gnt2a (ENSLCRG00005000207) ENSLCRG00005018810 otx2a (ENSLCRG00005018806) mdh1aa (ENSLCRG00005018780) ugp2a (ENSLCRG00005018763) ##22 vps54 (ENSLCRG00005017864) ENSLCRG00005017841 slc29a2 (ENSLCRG00005017839) lgalsla (ENSLCRG00005017838) aftpha (ENSLCRG00005017835) ENSLCRG00005017834 RAB1A (ENSLCRG00005017831) ENSLCRG00005017830 ENSLCRG00005017829 ACTR2 (ENSLCRG00005017810) SPRED2 (ENSLCRG00005017808) ENSLCRG00005017803 ENSLCRG00005017797 ENSLCRG00005017794 ENSLCRG00005017792 Gilthead seabream MODERN SPECIES pus10 (ENSSAUG00010000287) cct4 (ENSSAUG00010000203) ENSSAUG00010000167 ENSSAUG00010000162 XPO1 (ENSSAUG00010000126) USP34 (ENSSAUG00010000076) ENSSAUG00010000061 ENSSAUG00010000059 ENSSAUG00010000058 commd1 (ENSSAUG00010000055) b3gnt2a (ENSSAUG00010000053) ENSSAUG00010000051 otx2a (ENSSAUG00010000047) mdh1aa (ENSSAUG00010000041) slc29a2 (ENSSAUG00010000036) ugp2a (ENSSAUG00010015967) ##22 vps54 (ENSSAUG00010015425) vps54 (ENSSAUG00010015872) ENSSAUG00010015401 slc29a2 (ENSSAUG00010015396) ENSSAUG00010015392 ENSSAUG00010015387 aftpha (ENSSAUG00010015317) ENSSAUG00010015314 rab1aa (ENSSAUG00010015257) ENSSAUG00010015251 ENSSAUG00010015245 ENSSAUG00010015231 ENSSAUG00010015225 SPRED2 (ENSSAUG00010015220) ENSSAUG00010015213 Ovalentaria ANCESTRAL SPECIES ENSGT00940000177040 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT00950000182772.A.b ENSGT00940000157560.d.a ENSGT00940000155710.b Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00940000177040 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 Pomacentridae ANCESTRAL SPECIES 67 ENSGT00940000177040 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 Pomacentridae_A ANCESTRAL SPECIES 178 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01080000258336 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 Amphiprion ANCESTRAL SPECIES 93 ENSGT00390000014512.d ENSGT00390000008848 ENSGT00940000157935.a ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01080000258336 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00950000182812.H.ab.a.d ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 Orange clownfish MODERN SPECIES 17 ENSAPEG00000006143 mrpl4 (ENSAPEG00000006208) ENSAPEG00000006222 col9a1a (ENSAPEG00000006274) ENSAPEG00000006350 pus10 (ENSAPEG00000006406) cct4 (ENSAPEG00000006444) FAM161A (ENSAPEG00000006516) XPO1 (ENSAPEG00000006583) USP34 (ENSAPEG00000006673) commd1 (ENSAPEG00000006933) b3gnt2a (ENSAPEG00000006948) ENSAPEG00000006958 otx2a (ENSAPEG00000006978) mdh1aa (ENSAPEG00000007003) ugp2a (ENSAPEG00000007049) ##22 ENSAPEG00000007092 vps54 (ENSAPEG00000007179) ENSAPEG00000007272 slc29a2 (ENSAPEG00000007321) lgalsla (ENSAPEG00000007442) MAL (ENSAPEG00000007475) pgap4 (ENSAPEG00000007548) ENSAPEG00000007562 ENSAPEG00000007578 ENSAPEG00000007618 ENSAPEG00000007638 ENSAPEG00000007872 ENSAPEG00000007888 ENSAPEG00000007975 ENSAPEG00000008169 Clown anemonefish MODERN SPECIES 2359 otx2a (ENSAOCG00000015443) mdh1aa (ENSAOCG00000015416) ugp2a (ENSAOCG00000015351) ##22 ENSAOCG00000015312 Spiny chromis MODERN SPECIES 953 b3gnt2a (ENSAPOG00000021809) ENSAPOG00000021819 ENSAPOG00000021827 ENSAPOG00000021850 ENSAPOG00000021858 otx2a (ENSAPOG00000021883) mdh1aa (ENSAPOG00000021897) ugp2a (ENSAPOG00000022030) ##22 vps54 (ENSAPOG00000022172) ENSAPOG00000022270 slc29a2 (ENSAPOG00000022332) ENSAPOG00000022370 Bicolor damselfish MODERN SPECIES 267 ENSSPAG00000016325 EPHB1 (ENSSPAG00000016476) gpc1a (ENSSPAG00000016661) gpc5b (ENSSPAG00000016694) nasp (ENSSPAG00000016710) LRRC7 (ENSSPAG00000016745) ENSSPAG00000016800 ENSSPAG00000016803 ENSSPAG00000016820 ENSSPAG00000016857 commd1 (ENSSPAG00000016907) b3gnt2a (ENSSPAG00000016914) ENSSPAG00000016918 otx2a (ENSSPAG00000016950) ENSSPAG00000016962 ugp2a (ENSSPAG00000017009) ##22 Cichlidae ANCESTRAL SPECIES 3 ENSGT00940000158966 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00940000158966 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00530000064271 ENSGT00940000153463.b.b ENSGT00940000155636.b.a ENSGT00940000155710.b ENSGT01030000234642.a.b.b.d.a.f ENSGT00940000154922.a ENSGT00940000176873 ENSGT01100000263621 ENSGT00940000162755 Pseudocrenilabrinae_A ANCESTRAL SPECIES 33 ENSGT01020000231800 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00700000104550.a.i ENSGT00530000064271 ENSGT00940000153463.b.b ENSGT00940000155636.b.a ENSGT00390000003049.b.a ENSGT00940000156344.a ENSGT00940000156950.b ENSGT01100000263495.A.a.a ENSGT00390000013419 Haplochromini ANCESTRAL SPECIES 52 ENSGT01020000231800 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01080000258336 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00700000104550.a.i ENSGT00530000064271 ENSGT00940000153463.b.b.f.a ENSGT00940000153463.b.b.f.b ENSGT00940000155636.b.a ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT00950000182772.A.b Burton s mouthbrooder MODERN SPECIES 576 commd1 (ENSHBUG00000009252) b3gnt2a (ENSHBUG00000009244) ENSHBUG00000009242 otx2a (ENSHBUG00000009236) mdh1aa (ENSHBUG00000009219) ugp2a (ENSHBUG00000000232) ##22 vps54 (ENSHBUG00000009152) ENSHBUG00000009043 slc29a2 (ENSHBUG00000009022) lgalsla (ENSHBUG00000009010) MAL (ENSHBUG00000009002) pgap4 (ENSHBUG00000008996) ENSHBUG00000008993 RRP36 (ENSHBUG00000008974) tp53bp2b (ENSHBUG00000008960) GTPBP2 (ENSHBUG00000008900) kcnh1b (ENSHBUG00000008867) ENSHBUG00000008828 ENSHBUG00000008814 ENSHBUG00000008806 rcor3 (ENSHBUG00000008775) Haplochromini_A ANCESTRAL SPECIES 59 ENSGT00940000158966 ENSGT01020000231800 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00700000104550.a.i ENSGT00530000064271 ENSGT00940000153463.b.b.f.a ENSGT00390000003049.b.a ENSGT00940000156344.a ENSGT00940000156950.b ENSGT01100000263495.A.a.a ENSGT00390000013419 ENSGT00940000165311.b P. nyererei MODERN SPECIES 484 commd1 (ENSPNYG00000018457) b3gnt2a (ENSPNYG00000018441) ENSPNYG00000018425 ENSPNYG00000018410 otx2a (ENSPNYG00000018398) mdh1aa (ENSPNYG00000018371) ugp2a (ENSPNYG00000018323) ##22 vps54 (ENSPNYG00000018242) ENSPNYG00000018201 slc29a2 (ENSPNYG00000018182) lgalsla (ENSPNYG00000018161) MAL (ENSPNYG00000018076) pgap4 (ENSPNYG00000018057) ENSPNYG00000018043 RRP36 (ENSPNYG00000018030) tp53bp2b (ENSPNYG00000017914) gtpbp2b (ENSPNYG00000017823) ENSPNYG00000017807 kcnh1b (ENSPNYG00000017778) rcor3 (ENSPNYG00000017745) ENSPNYG00000017708 ENSPNYG00000017492 Haplochromini_B ANCESTRAL SPECIES 47 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT01100000263559.A ENSGT01100000263514.A.e.a ENSGT01060000248528.b.we.a ENSGT00950000183089.c.a.k.a.sb.a ENSGT00990000203553.c.a.b ENSGT00390000007870.k.b ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00700000104550.a.i ENSGT00530000064271 ENSGT00940000153463.b.b.f.a ENSGT00940000155636.b.a ENSGT01030000235581 ENSGT00940000155793.a.a ENSGT00940000154196.b ENSGT00940000163836.a ENSGT00950000182772.A.b Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1109 TENM3 (ENSMZEG00005000504) slc43a1b (ENSMZEG00005000435) zdhhc5a (ENSMZEG00005000423) tmx2b (ENSMZEG00005000376) ENSMZEG00005000366 ENSMZEG00005000362 ENSMZEG00005000327 ENSMZEG00005000296 ENSMZEG00005000193 ENSMZEG00005000168 ENSMZEG00005000107 ugp2a (ENSMZEG00005015363) ##22 mdh1aa (ENSMZEG00005015339) otx2a (ENSMZEG00005015325) mdh1aa (ENSMZEG00005015317) ugp2a (ENSMZEG00005015304) ##22 vps54 (ENSMZEG00005015271) ENSMZEG00005015258 slc29a2 (ENSMZEG00005015245) lgalsla (ENSMZEG00005015232) MAL (ENSMZEG00005015226) pgap4 (ENSMZEG00005015222) ENSMZEG00005015212 RRP36 (ENSMZEG00005015204) ENSMZEG00005015186 ndufs8a (ENSMZEG00005015172) ENSMZEG00005015164 glrba (ENSMZEG00005015153) gria2a (ENSMZEG00005015135) ENSMZEG00005015130 ENSMZEG00005015126 Zebra mbuna MODERN SPECIES 1109 ENSMZEG00005015164 ndufs8a (ENSMZEG00005015172) ENSMZEG00005015186 RRP36 (ENSMZEG00005015204) ENSMZEG00005015212 pgap4 (ENSMZEG00005015222) MAL (ENSMZEG00005015226) lgalsla (ENSMZEG00005015232) slc29a2 (ENSMZEG00005015245) ENSMZEG00005015258 vps54 (ENSMZEG00005015271) ugp2a (ENSMZEG00005015304) ##22 mdh1aa (ENSMZEG00005015317) otx2a (ENSMZEG00005015325) mdh1aa (ENSMZEG00005015339) ugp2a (ENSMZEG00005015363) ##22 ENSMZEG00005000107 ENSMZEG00005000168 ENSMZEG00005000193 ENSMZEG00005000296 ENSMZEG00005000327 ENSMZEG00005000362 ENSMZEG00005000366 tmx2b (ENSMZEG00005000376) zdhhc5a (ENSMZEG00005000423) slc43a1b (ENSMZEG00005000435) TENM3 (ENSMZEG00005000504) dctd (ENSMZEG00005000710) fbxo8 (ENSMZEG00005000763) ENSMZEG00005000808 ENSMZEG00005000814 Eastern happy MODERN SPECIES 18 ENSACLG00000014834 sap30bp (ENSACLG00000014823) ENSACLG00000014815 ENSACLG00000014801 ENSACLG00000014792 H3C1 (ENSACLG00000014721) ENSACLG00000014709 ENSACLG00000014587 commd1 (ENSACLG00000014571) b3gnt2a (ENSACLG00000014561) ENSACLG00000014485 ENSACLG00000014463 ENSACLG00000014452 otx2a (ENSACLG00000014440) mdh1aa (ENSACLG00000014364) ugp2a (ENSACLG00000014321) ##22 vps54 (ENSACLG00000014277) ENSACLG00000014223 slc29a2 (ENSACLG00000014184) lgalsla (ENSACLG00000014174) MAL (ENSACLG00000014152) pgap4 (ENSACLG00000014146) ENSACLG00000014002 RRP36 (ENSACLG00000013982) tp53bp2b (ENSACLG00000013896) gtpbp2b (ENSACLG00000013857) ENSACLG00000013848 kcnh1b (ENSACLG00000013777) rcor3 (ENSACLG00000013414) ENSACLG00000013405 ENSACLG00000013398 Nile tilapia MODERN SPECIES 18 ENSONIG00000010894 gtpbp2b (ENSONIG00000011595) ENSONIG00000012442 b3gnt2a (ENSONIG00000021044) commd1 (ENSONIG00000012443) USP34 (ENSONIG00000012445) ENSONIG00000028658 ENSONIG00000016118 ENSONIG00000016119 ENSONIG00000016125 rcor3 (ENSONIG00000016128) KCNH1 (ENSONIG00000016131) ENSONIG00000001826 ENSONIG00000031309 mdh1aa (ENSONIG00000016001) ugp2a (ENSONIG00000016000) ##22 ENSONIG00000031488 vps54 (ENSONIG00000015995) ENSONIG00000042676 ENSONIG00000042072 slc29a2 (ENSONIG00000015993) lgalsla (ENSONIG00000031320) ENSONIG00000037310 pgap4 (ENSONIG00000015988) ENSONIG00000039272 rrp36 (ENSONIG00000015983) ENSONIG00000043233 ENSONIG00000036116 ENSONIG00000038981 ENSONIG00000040665 HNRNPLL (ENSONIG00000016116) Midas cichlid MODERN SPECIES 1212 mdh1aa (ENSACIG00000009768) ugp2a (ENSACIG00000009795) ##22 vps54 (ENSACIG00000009825) ENSACIG00000009885 slc29a2 (ENSACIG00000009902) lgalsla (ENSACIG00000009920) ENSACIG00000009932 Atherinomorphae ANCESTRAL SPECIES 61 ENSGT00390000002789 ENSGT00940000177040 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00390000002789 ENSGT00940000177040 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000154705.A.b ENSGT00940000153759.a.b ENSGT00390000011856 ENSGT00940000153578.A.f ENSGT00390000017589 ENSGT00940000157287 Aplocheiloidei ANCESTRAL SPECIES 32 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT01100000263891 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000154705.A.b ENSGT00940000153759.a.b ENSGT00390000011856 ENSGT00940000153578.A.f ENSGT00390000017589 ENSGT00940000157287 Mangrove rivulus MODERN SPECIES 250 commd1 (ENSKMAG00000014338) b3gnt2a (ENSKMAG00000014334) ENSKMAG00000014313 otx2a (ENSKMAG00000014300) mdh1aa (ENSKMAG00000014260) ugp2a (ENSKMAG00000014197) ##22 vps54 (ENSKMAG00000014096) ENSKMAG00000014055 slc29a2 (ENSKMAG00000014022) lgalsla (ENSKMAG00000014001) ENSKMAG00000013982 pgap4 (ENSKMAG00000013977) tpcn3 (ENSKMAG00000013904) ENSKMAG00000013756 ENSKMAG00000013700 Turquoise killifish MODERN SPECIES 1617 ENSNFUG00015023717 dctd (ENSNFUG00015023704) ENSNFUG00015023701 ENSNFUG00015023698 FBXO8 (ENSNFUG00015023694) KCNH1 (ENSNFUG00015023684) ENSNFUG00015023678 rcor3 (ENSNFUG00015023643) TAF5L (ENSNFUG00015023630) capn9 (ENSNFUG00015023606) COMMD1 (ENSNFUG00015023593) ENSNFUG00015023583 ENSNFUG00015023575 otx2a (ENSNFUG00015023572) MDH1 (ENSNFUG00015023534) ugp2a (ENSNFUG00015023325) ##22 vps54 (ENSNFUG00015023231) PELI1A (ENSNFUG00015023219) slc29a2 (ENSNFUG00015023212) LGALSLA (ENSNFUG00015023207) TMEM246 (ENSNFUG00015023205) TPC3 (ENSNFUG00015023162) TTBK1 (ENSNFUG00015023144) ENSNFUG00015023110 Nfu_g_1_013649 (ENSNFUG00015023104) DDX5 (ENSNFUG00015022815) LRRC8E (ENSNFUG00015022783) ENSNFUG00015022782 Cdkn2d (ENSNFUG00015022781) ap1m2 (ENSNFUG00015022583) ENSNFUG00015020613 Cyprinodontoidei ANCESTRAL SPECIES 41 ENSGT00390000002789 ENSGT00940000177040 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000154705.A.b ENSGT00940000153759.a.b ENSGT00390000011856 ENSGT00940000153578.A.f.d.a ENSGT00940000153578.A.f.d.b ENSGT00390000017589 Poeciliinae ANCESTRAL SPECIES 9 ENSGT00940000177040 ENSGT00530000067736 ENSGT00940000179314 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000157864.a.a ENSGT00940000160755 ENSGT00390000015579.a.a.a ENSGT00940000159027 ENSGT00940000157287 ENSGT00390000017589 Poecilia ANCESTRAL SPECIES 6 ENSGT00390000002789 ENSGT00530000067736 ENSGT00940000179314 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000157864.a.a ENSGT00940000160755 ENSGT00390000015579.a.a.a ENSGT00940000159027 ENSGT00940000157287 ENSGT00390000017589 NAME_6 ANCESTRAL SPECIES 274 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 Amazon molly MODERN SPECIES 512 ENSPFOG00000000634 pus10 (ENSPFOG00000000909) cct4 (ENSPFOG00000024647) FAM161A (ENSPFOG00000001125) XPO1 (ENSPFOG00000001349) USP34 (ENSPFOG00000002074) ENSPFOG00000003839 commd1 (ENSPFOG00000021967) commd1 (ENSPFOG00000003910) b3gnt2a (ENSPFOG00000003950) ENSPFOG00000003959 otx2a (ENSPFOG00000004008) mdh1aa (ENSPFOG00000004030) ugp2a (ENSPFOG00000004151) ##22 vps54 (ENSPFOG00000004273) ENSPFOG00000004572 slc29a2 (ENSPFOG00000004682) lgalsla (ENSPFOG00000004842) MAL (ENSPFOG00000004880) pgap4 (ENSPFOG00000020080) ENSPFOG00000004941 ENSPFOG00000023857 zcchc4 (ENSPFOG00000004954) ENSPFOG00000004956 pde5ab (ENSPFOG00000004961) RAP1GDS1 (ENSPFOG00000005005) Sailfin molly MODERN SPECIES 2159 mdh1aa (ENSPLAG00000013726) ugp2a (ENSPLAG00000013720) ##22 vps54 (ENSPLAG00000013680) ENSPLAG00000013567 Guppy MODERN SPECIES 439 ENSPREG00000021067 ltv1 (ENSPREG00000021028) ifngr1 (ENSPREG00000020996) ENSPREG00000020980 ENSPREG00000020952 pus10 (ENSPREG00000020908) cct4 (ENSPREG00000020867) FAM161A (ENSPREG00000020846) XPO1 (ENSPREG00000020796) USP34 (ENSPREG00000020616) commd1 (ENSPREG00000020559) b3gnt2a (ENSPREG00000020553) ENSPREG00000020532 otx2a (ENSPREG00000020505) mdh1aa (ENSPREG00000020485) ugp2a (ENSPREG00000020460) ##22 vps54 (ENSPREG00000020356) ENSPREG00000020322 slc29a2 (ENSPREG00000020299) lgalsla (ENSPREG00000020286) MAL (ENSPREG00000020274) pgap4 (ENSPREG00000020267) ENSPREG00000020234 ENSPREG00000020097 ENSPREG00000020056 SPHK1 (ENSPREG00000020027) UBE2O (ENSPREG00000019941) aanat1 (ENSPREG00000019913) RHBDF2 (ENSPREG00000019887) acox1 (ENSPREG00000019573) ten1 (ENSPREG00000019514) Platyfish MODERN SPECIES 19 ltv1 (ENSXMAG00000029822) ENSXMAG00000029535 ifngr1 (ENSXMAG00000005709) ENSXMAG00000028107 ENSXMAG00000016020 pus10 (ENSXMAG00000005729) cct4 (ENSXMAG00000005750) FAM161A (ENSXMAG00000005787) XPO1 (ENSXMAG00000005790) USP34 (ENSXMAG00000005819) commd1 (ENSXMAG00000027888) b3gnt2a (ENSXMAG00000019813) ENSXMAG00000005863 otx2a (ENSXMAG00000028961) mdh1aa (ENSXMAG00000005875) ugp2a (ENSXMAG00000005887) ##22 vps54 (ENSXMAG00000005909) ENSXMAG00000005935 slc29a2 (ENSXMAG00000005954) LGALSL (ENSXMAG00000005970) MAL (ENSXMAG00000028560) pgap4 (ENSXMAG00000019814) ENSXMAG00000020874 tpcn3 (ENSXMAG00000013385) ENSXMAG00000023118 ENSXMAG00000005984 ENSXMAG00000024755 ENSXMAG00000022896 ENSXMAG00000022696 SPHK1 (ENSXMAG00000025799) ENSXMAG00000029744 NAME_4 ANCESTRAL SPECIES 74 ENSGT00390000002789 ENSGT00940000177040 ENSGT00530000067736 ENSGT00940000166495 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00940000154705.A.b ENSGT00940000153759.a.b ENSGT00390000011856 ENSGT00940000153578.A.f.d.a ENSGT00940000153578.A.f.d.b ENSGT00390000017589 Mummichog MODERN SPECIES 2270 atpv0e2 (ENSFHEG00000002546) ltv1 (ENSFHEG00000002538) ENSFHEG00000002510 ifngr1 (ENSFHEG00000002503) ENSFHEG00000002501 pus10 (ENSFHEG00000002475) cct4 (ENSFHEG00000002454) FAM161A (ENSFHEG00000002424) XPO1 (ENSFHEG00000002412) USP34 (ENSFHEG00000002359) commd1 (ENSFHEG00000002285) b3gnt2a (ENSFHEG00000002280) ENSFHEG00000002270 otx2a (ENSFHEG00000002265) mdh1aa (ENSFHEG00000002256) ugp2a (ENSFHEG00000002243) ##22 vps54 (ENSFHEG00000002217) ENSFHEG00000002167 slc29a2 (ENSFHEG00000002144) Sheepshead minnow MODERN SPECIES 337 ENSCVAG00000016786 pus10 (ENSCVAG00000016756) cct4 (ENSCVAG00000016601) FAM161A (ENSCVAG00000016570) XPO1 (ENSCVAG00000016558) USP34 (ENSCVAG00000016484) ENSCVAG00000000624 commd1 (ENSCVAG00000016248) b3gnt2a (ENSCVAG00000016242) otx2a (ENSCVAG00000016235) ENSCVAG00000016225 mdh1aa (ENSCVAG00000016210) ugp2a (ENSCVAG00000016163) ##22 vps54 (ENSCVAG00000016145) ENSCVAG00000016101 slc29a2 (ENSCVAG00000016072) lgalsla (ENSCVAG00000016062) MAL (ENSCVAG00000016041) pgap4 (ENSCVAG00000016037) tpcn3 (ENSCVAG00000016027) ENSCVAG00000015823 ENSCVAG00000015743 Oryzias ANCESTRAL SPECIES 15 ENSGT00940000156782.d ENSGT00940000158572 ENSGT00940000165589.a ENSGT00940000165589.b ENSGT00940000159730 ENSGT00940000159874 ENSGT00550000074820 ENSGT00440000039055 ENSGT00940000161498 ENSGT00390000013474.b.a ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.b.b.f ENSGT00950000183089.c.a.k.a.fb ENSGT00990000203553.c.b.b ENSGT00440000038745.a.a.a ENSGT00530000063753.A.a ENSGT00530000063753.B.c Oryzias_b ANCESTRAL SPECIES 34 ENSGT00940000156782.d ENSGT00940000158572 ENSGT00940000165589.a ENSGT00940000165589.b ENSGT00940000159730 ENSGT00940000159874 ENSGT00550000074820 ENSGT00440000039055 ENSGT00940000161498 ENSGT00390000013474.b.a ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 ENSGT00950000183089.c.a.k.a.fb ENSGT00990000203553.c.b.b Indian medaka MODERN SPECIES 21 ENSOMEG00000019537 ENSOMEG00000019506 ENSOMEG00000000515 ENSOMEG00000019451 PCGF2 (ENSOMEG00000019443) PIP4K2B (ENSOMEG00000019420) psmb3 (ENSOMEG00000019384) cwc25 (ENSOMEG00000019365) scrn2 (ENSOMEG00000000510) ENSOMEG00000019292 commd1 (ENSOMEG00000019278) b3gnt2a (ENSOMEG00000000505) ENSOMEG00000019249 otx2a (ENSOMEG00000019232) mdh1aa (ENSOMEG00000019208) ugp2a (ENSOMEG00000019140) ##22 vps54 (ENSOMEG00000019074) ENSOMEG00000019011 slc29a2 (ENSOMEG00000018982) lgalsla (ENSOMEG00000018952) ENSOMEG00000018924 pgap4 (ENSOMEG00000018912) tpcn3 (ENSOMEG00000000912) ENSOMEG00000018822 ENSOMEG00000000896 ENSOMEG00000018661 ENSOMEG00000018632 ENSOMEG00000018569 ENSOMEG00000018548 ENSOMEG00000018533 ENSOMEG00000018519 Javanese ricefish MODERN SPECIES ENSOJAG00000012281 ENSOJAG00000012261 ENSOJAG00000012254 ENSOJAG00000012244 PCGF2 (ENSOJAG00000012224) PIP4K2B (ENSOJAG00000011506) psmb3 (ENSOJAG00000011353) cwc25 (ENSOJAG00000011346) ENSOJAG00000011320 scrn2 (ENSOJAG00000011207) commd1 (ENSOJAG00000011177) b3gnt2a (ENSOJAG00000011165) ENSOJAG00000011113 otx2a (ENSOJAG00000011100) mdh1aa (ENSOJAG00000010826) ugp2a (ENSOJAG00000010120) ##22 vps54 (ENSOJAG00000009180) ENSOJAG00000009060 slc29a2 (ENSOJAG00000009047) ENSOJAG00000009034 lgalsla (ENSOJAG00000009011) pgap4 (ENSOJAG00000008998) tpcn3 (ENSOJAG00000008877) ENSOJAG00000008822 ENSOJAG00000008536 ENSOJAG00000008526 ENSOJAG00000008505 ENSOJAG00000008466 ENSOJAG00000008458 ENSOJAG00000008440 ENSOJAG00000008421 Oryzias_a ANCESTRAL SPECIES 31 ENSGT00940000156782.d ENSGT00940000158572 ENSGT00940000165589.a ENSGT00990000204927 ENSGT00940000159730 ENSGT00940000159874 ENSGT00550000074820 ENSGT00440000039055 ENSGT00940000161498 ENSGT00390000013474.b.a ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000155337.`b ENSGT00940000154987.i.b.a.b ENSGT00500000045018 ENSGT00940000162755 ENSGT00940000165311.b ENSGT00550000074953 Japanese Medaka HdrR MODERN SPECIES ENSORLG00000027866 ENSORLG00000029268 ENSORLG00000025709 PIP4K2B (ENSORLG00000022409) psmb3 (ENSORLG00000019520) cwc25 (ENSORLG00000018569) sp6 (ENSORLG00000018574) scrn2 (ENSORLG00000002816) commd1 (ENSORLG00000022331) b3gnt2a (ENSORLG00000002840) ENSORLG00000002846 ENSORLG00000022190 otx2a (ENSORLG00000030023) ENSORLG00000027545 mdh1 (ENSORLG00000002906) ugp2a (ENSORLG00000002940) ##22 vps54 (ENSORLG00000002974) ENSORLG00000002992 ENSORLG00000003028 lgalsla (ENSORLG00000003039) ENSORLG00000003048 pgap4 (ENSORLG00000003053) tpcn3 (ENSORLG00000024684) ENSORLG00000003068 ENSORLG00000003080 ENSORLG00000000884 ENSORLG00000027232 ENSORLG00000022610 ENSORLG00000023014 ENSORLG00000030081 ENSORLG00000029586 Chinese medaka MODERN SPECIES 355 ENSOSIG00000023532 ENSOSIG00000023531 ENSOSIG00000023530 ENSOSIG00000023529 PCGF2 (ENSOSIG00000023528) PIP4K2B (ENSOSIG00000023492) psmb3 (ENSOSIG00000023461) cwc25 (ENSOSIG00000023460) sp6 (ENSOSIG00000023459) scrn2 (ENSOSIG00000023457) commd1 (ENSOSIG00000023456) b3gnt2a (ENSOSIG00000023455) ENSOSIG00000023452 otx2a (ENSOSIG00000023450) mdh1aa (ENSOSIG00000023428) ugp2a (ENSOSIG00000023369) ##22 lgalsla (ENSOSIG00000023345) MAL (ENSOSIG00000023343) pgap4 (ENSOSIG00000023339) tpcn3 (ENSOSIG00000023331) ENSOSIG00000023317 Pinecone sodierfish MODERN SPECIES ENSMMDG00005017671 ENSMMDG00005017022 ENSMMDG00005012208 pus10 (ENSMMDG00005012020) cct4 (ENSMMDG00005011867) ENSMMDG00005011860 XPO1 (ENSMMDG00005011834) USP34 (ENSMMDG00005010790) ENSMMDG00005010738 ENSMMDG00005010735 commd1 (ENSMMDG00005010733) b3gnt2a (ENSMMDG00005010730) ENSMMDG00005010726 otx2a (ENSMMDG00005010720) mdh1aa (ENSMMDG00005010643) ugp2a (ENSMMDG00005009111) ##22 vps54 (ENSMMDG00005008574) ENSMMDG00005008567 slc29a2 (ENSMMDG00005008565) lgalsla (ENSMMDG00005008564) ENSMMDG00005008562 aftpha (ENSMMDG00005008560) ENSMMDG00005008554 RAB1A (ENSMMDG00005008549) ACTR2 (ENSMMDG00005008542) SPRED2 (ENSMMDG00005008521) ENSMMDG00005008505 ENSMMDG00005008491 ppp3r1b (ENSMMDG00005008478) cnrip1a (ENSMMDG00005008472) ENSMMDG00005008468 Cod MODERN SPECIES 16 ENSGMOG00000033309 ENSGMOG00000031575 p2rx3b (ENSGMOG00000014631) ENSGMOG00000014659 ENSGMOG00000032097 ndufs8a (ENSGMOG00000014669) ENSGMOG00000033598 ENSGMOG00000035609 ENSGMOG00000029985 ENSGMOG00000025136 ENSGMOG00000014680 ENSGMOG00000035226 ENSGMOG00000031691 otx2a (ENSGMOG00000032864) MDH1 (ENSGMOG00000003426) ugp2a (ENSGMOG00000003445) ##22 VPS54 (ENSGMOG00000003472) ENSGMOG00000037064 ENSGMOG00000012791 ENSGMOG00000025534 LGALSL (ENSGMOG00000009968) ENSGMOG00000032402 AFTPH (ENSGMOG00000030916) ENSGMOG00000025646 RAB1A (ENSGMOG00000010022) actr2a (ENSGMOG00000010030) SPRED2 (ENSGMOG00000033943) meis1a (ENSGMOG00000014286) ENSGMOG00000000841 ENSGMOG00000030417 ENSGMOG00000031157 Protacanthopterygii ANCESTRAL SPECIES 116 ENSGT00940000166495 ENSGT00950000183955 ENSGT00390000007529 ENSGT00550000074956 ENSGT00940000178862 ENSGT00940000157824.i.a ENSGT00940000153408.B.s.b ENSGT00940000158659 ENSGT00730000111690.B.f.b.a.a.f ENSGT00940000163878 ENSGT00390000012029 ENSGT00940000155345.r ENSGT01100000263601 ENSGT00940000167432 ENSGT00530000063410.a.q.b ENSGT00940000153464.B.z.a ##22 ENSGT00390000000583 ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000154186.a.r ENSGT00530000063867.b ENSGT00940000155078.a.b.a.b ENSGT00940000154556.a.a ENSGT00940000156841.a.b ENSGT00940000156327.l.p ENSGT00390000009597.d ENSGT00940000156530.c.`b.b ENSGT00390000004284.f ENSGT00390000012248 ENSGT00390000010591 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1072 ENSGT00940000161234.d ENSGT00530000063410.a.q.b.d ENSGT00940000153464.B.z.a.g ##22 ENSGT00390000000583.b ENSGT00950000183050.b.b.b.a.a.a.b.a.a Salmoninae_a ANCESTRAL SPECIES 67 ENSGT01050000244891.E.a.a.c ENSGT00970000195479.A.b ENSGT00940000166495.c ENSGT00390000007529.d ENSGT00550000074956.f ENSGT00940000178862.a.a ENSGT00940000157824.i.a.eb.a ENSGT00940000153408.B.s.b.m ENSGT00940000158659.d ENSGT00730000111690.B.f.b.a.a.f ENSGT00390000012029.ib ENSGT00940000155345.r.a ENSGT01100000263601.a ENSGT00940000161234.d.b ENSGT00530000063410.a.q.b.d ENSGT00940000153464.B.z.a.g ##22 ENSGT00390000000583.b ENSGT00950000183050.b.b.b.a.a.a.b.a.a ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000154186.a.r.e ENSGT00530000063867.b.c ENSGT00940000155078.a.b.a.b.h.a ENSGT00940000154556.a.a.b ENSGT00940000156841.a.b.f ENSGT00940000156327.l.p.b ENSGT00390000009597.d.f ENSGT00940000156530.c.`b.b.g.b ENSGT00390000004284.f.e ENSGT00390000012248.j ENSGT01100000263476.C.a.a.a.b.b.b Oncorhynchus ANCESTRAL SPECIES 1 ENSGT01050000244891.E.a.a.c ENSGT00970000195479.A.b ENSGT00940000166495.c ENSGT00390000007529.d ENSGT00550000074956.f ENSGT00940000157824.i.a.db.a.a ENSGT00940000157824.i.a.eb.a ENSGT00940000153408.B.s.b.m ENSGT00940000158659.d ENSGT00730000111690.B.f.b.a.a.f ENSGT00390000012029.ib ENSGT00940000155345.r.a ENSGT01100000263601.a ENSGT00940000161234.d.b.a ENSGT00530000063410.a.q.b.d ENSGT00940000153464.B.z.a.g ##22 ENSGT00390000000583.b ENSGT00950000183050.b.b.b.a.a.a.b.a.a ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000154186.a.r.e ENSGT00530000063867.b.c ENSGT00940000155078.a.b.a.b.h.a ENSGT00940000154556.a.a.b ENSGT00940000156841.a.b.f ENSGT00940000156327.l.p.b ENSGT00390000009597.d.f ENSGT00940000156530.c.`b.b.g.b ENSGT00390000004284.f.e ENSGT00390000012248.j ENSGT01060000249238 Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT01050000244891.E.a.a.c ENSGT00970000195479.A.b ENSGT00940000166495.c ENSGT00390000007529.d ENSGT00550000074956.f ENSGT00940000157824.i.a.db.a.a ENSGT00940000157824.i.a.eb.a ENSGT00940000153408.B.s.b.m ENSGT00940000158659.d ENSGT00730000111690.B.f.b.a.a.f ENSGT00390000012029.ib ENSGT00940000155345.r.a ENSGT01100000263601.a ENSGT00940000161234.d.b.a ENSGT00530000063410.a.q.b.d ENSGT00940000153464.B.z.a.g ##22 ENSGT00390000000583.b ENSGT00950000183050.b.b.b.a.a.a.b.a.a ENSGT00940000155337.`b ENSGT00940000177082 ENSGT00940000154186.a.r.e ENSGT00530000063867.b.c ENSGT00940000155078.a.b.a.b.h.a ENSGT00940000154556.a.a.b ENSGT00940000156841.a.b.f ENSGT00940000156327.l.p.b ENSGT00390000009597.d.f ENSGT00940000156530.c.`b.b.g.b ENSGT00390000004284.f.e ENSGT00390000012248.j ENSGT01060000249238 Coho salmon MODERN SPECIES C17orf58 (ENSOKIG00005046134) ENSOKIG00005046096 ENSOKIG00005046072 ENSOKIG00005045928 pus10 (ENSOKIG00005045896) cct4 (ENSOKIG00005045653) FAM161A (ENSOKIG00005045635) ENSOKIG00005045490 USP34 (ENSOKIG00005044727) ENSOKIG00005044680 commd1 (ENSOKIG00005044673) b3gnt2a (ENSOKIG00005044669) ENSOKIG00005044662 OTX1 (ENSOKIG00005044655) mdh1aa (ENSOKIG00005044577) ugp2a (ENSOKIG00005043894) ##22 vps54 (ENSOKIG00005042711) ENSOKIG00005042591 lgalsla (ENSOKIG00005042539) ENSOKIG00005042517 aftpha (ENSOKIG00005042497) SERTAD2 (ENSOKIG00005042488) ENSOKIG00005042429 ACTR2 (ENSOKIG00005042275) SPRED2 (ENSOKIG00005042251) MEIS1 (ENSOKIG00005041796) etaa1a (ENSOKIG00005041770) PPP3R1 (ENSOKIG00005041674) cnrip1a (ENSOKIG00005041645) fbxo48 (ENSOKIG00005041638) ENSOKIG00005041623 Chinook salmon MODERN SPECIES 11 ENSOTSG00005007364 pus10 (ENSOTSG00005008986) cct4 (ENSOTSG00005008990) ENSOTSG00005009004 ENSOTSG00005009005 XPO1 (ENSOTSG00005009013) USP34 (ENSOTSG00005009050) ENSOTSG00005009228 ENSOTSG00005009229 ENSOTSG00005009230 commd1 (ENSOTSG00005009231) b3gnt2a (ENSOTSG00005009232) ENSOTSG00005009233 OTX1 (ENSOTSG00005009235) mdh1aa (ENSOTSG00005009236) ugp2a (ENSOTSG00005009238) ##22 vps54 (ENSOTSG00005009904) ENSOTSG00005010658 lgalsla (ENSOTSG00005010659) aftpha (ENSOTSG00005010660) sertad2b (ENSOTSG00005010663) rab1ab (ENSOTSG00005010665) ACTR2 (ENSOTSG00005010672) SPRED2 (ENSOTSG00005010765) meis1b (ENSOTSG00005010767) etaa1a (ENSOTSG00005010768) PPP3R1 (ENSOTSG00005010770) cnrip1a (ENSOTSG00005010806) ENSOTSG00005010807 ENSOTSG00005010809 snrpb2 (ENSOTSG00005010811) Rainbow trout MODERN SPECIES 8 ENSOMYG00000018365 ENSOMYG00000064434 ENSOMYG00000018387 ENSOMYG00000018437 pus10 (ENSOMYG00000018682) cct4 (ENSOMYG00000018803) ENSOMYG00000074120 ENSOMYG00000018929 XPO1 (ENSOMYG00000018989) USP34 (ENSOMYG00000019272) commd1 (ENSOMYG00000019628) b3gnt2a (ENSOMYG00000019635) ENSOMYG00000019642 OTX1 (ENSOMYG00000019650) MDH1 (ENSOMYG00000019660) UGP2 (ENSOMYG00000019790) ##22 vps54 (ENSOMYG00000020947) ENSOMYG00000021247 ENSOMYG00000052056 lgalsla (ENSOMYG00000021281) ENSOMYG00000070037 SERTAD2 (ENSOMYG00000021333) ENSOMYG00000021355 ACTR2 (ENSOMYG00000021385) SPRED2 (ENSOMYG00000048611) ENSOMYG00000068147 MEIS1 (ENSOMYG00000021484) etaa1a (ENSOMYG00000021545) PPP3R1 (ENSOMYG00000021603) cnrip1a (ENSOMYG00000021755) fbxo48 (ENSOMYG00000021763) Salmo ANCESTRAL SPECIES 56 ENSGT01050000244891.E.a.a.c ENSGT00970000195479.A.b ENSGT00940000166495.c ENSGT00390000007529.d ENSGT00550000074956.f ENSGT00940000178862.a.a ENSGT00940000157824.i.a.eb.a ENSGT00940000153408.B.s.b.m ENSGT00940000158659.d ENSGT00730000111690.B.f.b.a.a.f ENSGT00390000012029.ib ENSGT00940000155345.r.a ENSGT01100000263601.a ENSGT00940000161234.d.b ENSGT00530000063410.a.q.b.d ENSGT00940000153464.B.z.a.g ##22 ENSGT00390000000583.b ENSGT00950000183050.b.b.b.a.a.a.b.a.a ENSGT00940000155337.`b ENSGT00940000154186.a.r.e ENSGT00530000063867.b.c ENSGT00940000155078.a.b.a.b.h.a ENSGT00940000154556.a.a.b ENSGT00940000156841.a.b.f ENSGT00940000156327.l.p.b ENSGT00390000009597.d.f.b ENSGT00940000156530.c.`b.b.g.b ENSGT00390000004284.f.e ENSGT00390000012248.j ENSGT01100000263476.C.a.a.a.b.b.b ENSGT00390000010591.k River trout MODERN SPECIES 5 C17orf58 (ENSSTUG00000031031) ENSSTUG00000031001 ENSSTUG00000030992 ENSSTUG00000030782 pus10 (ENSSTUG00000030653) cct4 (ENSSTUG00000030507) ENSSTUG00000030498 ENSSTUG00000030496 XPO1 (ENSSTUG00000030289) ENSSTUG00000030085 commd1 (ENSSTUG00000030068) b3gnt2a (ENSSTUG00000030059) ENSSTUG00000030046 OTX1 (ENSSTUG00000030039) mdh1aa (ENSSTUG00000029738) ugp2a (ENSSTUG00000029583) ##22 vps54 (ENSSTUG00000028493) ENSSTUG00000028433 lgalsla (ENSSTUG00000028414) aftpha (ENSSTUG00000028372) sertad2b (ENSSTUG00000028367) rab1ab (ENSSTUG00000028280) ACTR2 (ENSSTUG00000028049) SPRED2 (ENSSTUG00000035506) meis1b (ENSSTUG00000034640) etaa1a (ENSSTUG00000034507) PPP3R1 (ENSSTUG00000034407) cnrip1a (ENSSTUG00000034391) fbxo48 (ENSSTUG00000034385) ENSSTUG00000034373 APLF (ENSSTUG00000034342) Atlantic salmon MODERN SPECIES 3 ENSSSAG00000089948 ENSSSAG00000065419 ENSSSAG00000065440 pus10 (ENSSSAG00000067264) cct4 (ENSSSAG00000067334) FAM161A (ENSSSAG00000067389) XPO1 (ENSSSAG00000067396) USP34 (ENSSSAG00000067530) ENSSSAG00000105301 ENSSSAG00000067653 commd1 (ENSSSAG00000067660) b3gnt2a (ENSSSAG00000089430) ENSSSAG00000067665 OTX1 (ENSSSAG00000084328) MDH1 (ENSSSAG00000067693) ugpa (ENSSSAG00000067874) ##22 vps54 (ENSSSAG00000067962) ENSSSAG00000114332 aftpha (ENSSSAG00000068076) SERTAD2 (ENSSSAG00000111855) ENSSSAG00000068085 ARP2A (ENSSSAG00000068208) ENSSSAG00000102278 ENSSSAG00000087132 SPRED2 (ENSSSAG00000092399) MEIS1 (ENSSSAG00000068225) etaa1a (ENSSSAG00000068884) ENSSSAG00000068903 fbxo48 (ENSSSAG00000121997) ENSSSAG00000068923 ENSSSAG00000068926 Huchen MODERN SPECIES 3453 otx2a (ENSHHUG00000010223) mdh1aa (ENSHHUG00000010243) ugp2a (ENSHHUG00000010306) ##22 ENSHHUG00000010424 Salmoninae ANCESTRAL SPECIES 187 ENSGT00970000195479.A ENSGT00940000166495.d ENSGT00390000007529.c ENSGT00550000074956.e ENSGT00940000157824.i.a.db ENSGT00940000178862.b ENSGT00940000157824.i.a.eb.b ENSGT00940000153408.B.s.b.n ENSGT00940000158659 ENSGT00940000163878 ENSGT00390000012029.hb ENSGT00940000155345.r.b ENSGT01100000263601.b ENSGT00940000167432 ENSGT00530000063410.a.q.b.c ENSGT00940000153464.B.z.a.h ##22 ENSGT00390000000583.a ENSGT00950000183050.b.b.b.a.a.a.b.a.b ENSGT00940000154186.a.r.f ENSGT00940000155078.a.b.a.b.h.b ENSGT00940000154556.a.a ENSGT00940000156841.a.b.e ENSGT00940000156327.l.p.a Salmoninae_a ANCESTRAL SPECIES 58 ENSGT01050000244891.E.a.a.d ENSGT00970000195479.A.a ENSGT00940000166495.d ENSGT00390000007529.c ENSGT00550000074956.e ENSGT00940000157824.i.a.db ENSGT00940000178862.b ENSGT00940000157824.i.a.eb.b ENSGT00940000153408.B.s.b.n ENSGT00940000158659.c ENSGT00390000012029.hb ENSGT00940000155345.r.b ENSGT01100000263601.b ENSGT00940000167432 ENSGT00530000063410.a.q.b.c ENSGT00940000153464.B.z.a.h ##22 ENSGT00390000000583.a ENSGT00950000183050.b.b.b.a.a.a.b.a.b ENSGT00940000154186.a.r.f ENSGT00530000063867.b.d ENSGT00940000155078.a.b.a.b.h.b ENSGT00940000154556.a.a.a ENSGT00940000156841.a.b.e ENSGT00940000156327.l.p.a ENSGT00390000009597.d.e.a ENSGT00940000156530.c.`b.b.g.a ENSGT00390000004284.f.f ENSGT00390000012248.i ENSGT00390000010591.l ENSGT00940000166657.b ENSGT00940000170452 Salmo ANCESTRAL SPECIES 37 ENSGT00390000002361.j ENSGT01050000244891.E.a.a.d ENSGT00970000195479.A.a ENSGT00940000166495.d ENSGT00390000007529.c ENSGT00550000074956.e ENSGT00940000157824.i.a.db ENSGT00940000157824.i.a.eb.b ENSGT00940000153408.B.s.b.n ENSGT00940000158659.c ENSGT00390000012029.hb ENSGT00940000155345.r.b ENSGT01100000263601.b ENSGT00940000167432 ENSGT00530000063410.a.q.b.c ENSGT00940000153464.B.z.a.h ##22 ENSGT00390000000583.a ENSGT00950000183050.b.b.b.a.a.a.b.a.b ENSGT00940000154186.a.r.f ENSGT00530000063867.b.d ENSGT00940000155078.a.b.a.b.h.b ENSGT00940000154556.a.a.a ENSGT00940000156841.a.b.e ENSGT00940000156327.l.p.a ENSGT00390000009597.d.f.a ENSGT00940000156530.c.`b.b.h ENSGT00390000004284.f.f ENSGT00390000012248.i ENSGT00390000010591.l ENSGT00940000166657.b ENSGT00390000007046.a.e.a Atlantic salmon MODERN SPECIES 11 ENSSSAG00000107647 ENSSSAG00000001998 ENSSSAG00000001575 tcpd (ENSSSAG00000001365) pus10 (ENSSSAG00000001442) ENSSSAG00000001342 FAM161A (ENSSSAG00000001345) XPO1 (ENSSSAG00000001278) USP34 (ENSSSAG00000001012) commd1 (ENSSSAG00000106111) b3gnt2a (ENSSSAG00000105672) ENSSSAG00000000945 OTX1 (ENSSSAG00000081994) ENSSSAG00000104132 MDH1 (ENSSSAG00000000909) UGP2 (ENSSSAG00000000820) ##22 vps54 (ENSSSAG00000000613) ENSSSAG00000090533 aftpha (ENSSSAG00000000430) SERTAD2 (ENSSSAG00000112806) ENSSSAG00000000410 ARP2A (ENSSSAG00000000385) SPRED2 (ENSSSAG00000106065) MEIS1 (ENSSSAG00000000278) etaa1a (ENSSSAG00000053570) PPP3R1 (ENSSSAG00000100782) cnrip1a (ENSSSAG00000083138) fbxo48 (ENSSSAG00000053532) ENSSSAG00000081788 ENSSSAG00000114042 RU2B (ENSSSAG00000053481) River trout MODERN SPECIES 31 ENSSTUG00000039694 ENSSTUG00000039725 ENSSTUG00000039741 pus10 (ENSSTUG00000040047) cct4 (ENSSTUG00000040147) ENSSTUG00000040233 ENSSTUG00000040240 XPO1 (ENSSTUG00000040259) USP34 (ENSSTUG00000040582) ENSSTUG00000041961 commd1 (ENSSTUG00000041981) b3gnt2a (ENSSTUG00000041990) ENSSTUG00000041996 otx2a (ENSSTUG00000042030) mdh1aa (ENSSTUG00000042055) ugp2a (ENSSTUG00000042169) ##22 vps54 (ENSSTUG00000043877) ENSSTUG00000044491 ENSSTUG00000044535 aftpha (ENSSTUG00000044544) sertad2b (ENSSTUG00000044559) rab1ab (ENSSTUG00000044565) ACTR2 (ENSSTUG00000044585) SPRED2 (ENSSTUG00000044781) meis1b (ENSSTUG00000044793) ENSSTUG00000044961 etaa1a (ENSSTUG00000044971) PPP3R1 (ENSSTUG00000045013) cnrip1a (ENSSTUG00000045100) fbxo48 (ENSSTUG00000045114) ENSSTUG00000045128 Oncorhynchus ANCESTRAL SPECIES 42 ENSGT00390000002361.j ENSGT01050000244891.E.a.a.d ENSGT00970000195479.A.a ENSGT00940000166495.d ENSGT00390000007529.c ENSGT00550000074956.e ENSGT00940000157824.i.a.db.b ENSGT00940000178862.b ENSGT00940000157824.i.a.eb.b ENSGT00940000153408.B.s.b.n ENSGT00940000158659.c ENSGT00390000012029.hb ENSGT00940000155345.r.b ENSGT00940000161234.d.b.b ENSGT00530000063410.a.q.b.c ENSGT00940000153464.B.z.a.h ##22 ENSGT00390000000583.a ENSGT00950000183050.b.b.b.a.a.a.b.a.b ENSGT00940000154186.a.r.f ENSGT00530000063867.b.d ENSGT00940000155078.a.b.a.b.h.b ENSGT00940000154556.a.a.a ENSGT00940000156841.a.b.e ENSGT00940000156327.l.p.a ENSGT00390000009597.d.e.a ENSGT00940000156530.c.`b.b.g.a ENSGT00390000004284.f.f ENSGT00390000012248.i ENSGT00940000170452 ENSGT00390000007046.a.e.a ENSGT00940000162838.g.a.c.a Oncorhynchus_a ANCESTRAL SPECIES 38 ENSGT00390000002361.j ENSGT01050000244891.E.a.a.d ENSGT00970000195479.A.a ENSGT00940000166495.d ENSGT00390000007529.c ENSGT00550000074956.e ENSGT00940000157824.i.a.db.b ENSGT00940000178862.b ENSGT00940000157824.i.a.eb.b ENSGT00940000153408.B.s.b.n ENSGT00940000158659.c ENSGT00390000012029.hb ENSGT00940000155345.r.b ENSGT00940000161234.d.b.b ENSGT00530000063410.a.q.b.c ENSGT00940000153464.B.z.a.h ##22 ENSGT00390000000583.a ENSGT00950000183050.b.b.b.a.a.a.b.a.b ENSGT00940000154186.a.r.f ENSGT00530000063867.b.d ENSGT00940000155078.a.b.a.b.h.b ENSGT00940000154556.a.a.a ENSGT00940000156841.a.b.e ENSGT00940000156327.l.p.a ENSGT00390000009597.d.e.a ENSGT00940000156530.c.`b.b.g.a ENSGT00390000004284.f.f ENSGT00390000012248.i ENSGT00940000170452 ENSGT00390000007046.a.e.a ENSGT00940000162838.g.a.c.a Coho salmon MODERN SPECIES 12 BPTF (ENSOKIG00005018687) C17orf58 (ENSOKIG00005018649) ENSOKIG00005026604 ENSOKIG00005026590 ENSOKIG00005024950 pus10 (ENSOKIG00005024865) cct4 (ENSOKIG00005024618) ENSOKIG00005024587 ENSOKIG00005024580 ENSOKIG00005024422 USP34 (ENSOKIG00005023249) commd1 (ENSOKIG00005023193) b3gnt2a (ENSOKIG00005023184) OTX1 (ENSOKIG00005023176) MDH1 (ENSOKIG00005023137) UGP2 (ENSOKIG00005022462) ##22 VPS54 (ENSOKIG00005020639) ENSOKIG00005020548 AFTPH (ENSOKIG00005020534) sertad2b (ENSOKIG00005020528) RAB1B (ENSOKIG00005020521) ACTR2 (ENSOKIG00005020367) SPRED2 (ENSOKIG00005020341) MEIS1 (ENSOKIG00005020265) etaa1a (ENSOKIG00005020222) PPP3R1 (ENSOKIG00005020178) cnrip1a (ENSOKIG00005020161) fbxo48 (ENSOKIG00005020152) prokr1a (ENSOKIG00005020143) snrpb2 (ENSOKIG00005020115) ENSOKIG00005019978 Chinook salmon MODERN SPECIES 25 C17orf58 (ENSOTSG00005012850) ENSOTSG00005012852 ENSOTSG00005012858 ENSOTSG00005012868 pus10 (ENSOTSG00005016390) cct4 (ENSOTSG00005016399) ENSOTSG00005016455 ENSOTSG00005016456 XPO1 (ENSOTSG00005016459) USP34 (ENSOTSG00005016527) ENSOTSG00005016550 commd1 (ENSOTSG00005016552) b3gnt2a (ENSOTSG00005016554) OTX1 (ENSOTSG00005016556) MDH1 (ENSOTSG00005016559) ugp2a (ENSOTSG00005016561) ##22 vps54 (ENSOTSG00005016938) ENSOTSG00005017663 aftpha (ENSOTSG00005017664) ENSOTSG00005017665 sertad2b (ENSOTSG00005017666) rab1ab (ENSOTSG00005017667) ACTR2 (ENSOTSG00005017668) SPRED2 (ENSOTSG00005017671) meis1b (ENSOTSG00005017681) etaa1a (ENSOTSG00005021779) PPP3R1 (ENSOTSG00005021808) cnrip1a (ENSOTSG00005021863) fbxo48 (ENSOTSG00005021864) prokr1a (ENSOTSG00005021865) snrpb2 (ENSOTSG00005021873) Rainbow trout MODERN SPECIES 4 C17orf58 (ENSOMYG00000035577) ENSOMYG00000068540 ENSOMYG00000035602 ENSOMYG00000035654 ENSOMYG00000035758 cct4 (ENSOMYG00000035825) ENSOMYG00000035913 ENSOMYG00000035915 XPO1 (ENSOMYG00000035963) USP34 (ENSOMYG00000036212) commd1 (ENSOMYG00000036577) ENSOMYG00000052475 b3gnt2a (ENSOMYG00000036592) OTX1 (ENSOMYG00000036609) MDH1 (ENSOMYG00000036635) UGP2 (ENSOMYG00000036702) ##22 VPS54 (ENSOMYG00000036941) ENSOMYG00000037389 AFTPH (ENSOMYG00000037408) ENSOMYG00000037421 SERTAD2 (ENSOMYG00000037427) ENSOMYG00000059668 ENSOMYG00000037436 ACTR2 (ENSOMYG00000037471) SPRED2 (ENSOMYG00000037493) MEIS1 (ENSOMYG00000037531) etaa1a (ENSOMYG00000037561) PPP3R1 (ENSOMYG00000037628) cnrip1a (ENSOMYG00000037698) fbxo48 (ENSOMYG00000037703) ENSOMYG00000037708 Huchen MODERN SPECIES 240 ENSHHUG00000043635 ENSHHUG00000043623 commd1 (ENSHHUG00000043622) B3GNT2 (ENSHHUG00000043619) ENSHHUG00000043615 otx2a (ENSHHUG00000043609) mdh1aa (ENSHHUG00000043462) ENSHHUG00000043460 ugp2a (ENSHHUG00000043434) ##22 vps54 (ENSHHUG00000043428) ENSHHUG00000043417 rpl9 (ENSHHUG00000043410) LGALSL (ENSHHUG00000043405) ENSHHUG00000043403 aftpha (ENSHHUG00000043393) sertad2b (ENSHHUG00000043391) rab1ab (ENSHHUG00000043386) ACTR2 (ENSHHUG00000043267) SPRED2 (ENSHHUG00000043253) meis1b (ENSHHUG00000043203) ENSHHUG00000043187 PPP3R1 (ENSHHUG00000043141) cnrip1a (ENSHHUG00000043133) fbxo48 (ENSHHUG00000043132) Northern pike MODERN SPECIES 8 ENSELUG00000013103 ENSELUG00000013058 ENSELUG00000013038 pus10 (ENSELUG00000012985) cct4 (ENSELUG00000012818) ENSELUG00000027408 ENSELUG00000012751 XPO1 (ENSELUG00000012707) USP34 (ENSELUG00000001065) ENSELUG00000012557 commd1 (ENSELUG00000012544) b3gnt2a (ENSELUG00000012534) ENSELUG00000012525 otx2a (ENSELUG00000034038) mdh1aa (ENSELUG00000012493) ugp2a (ENSELUG00000012451) ##22 vps54 (ENSELUG00000012386) ENSELUG00000012297 ENSELUG00000012197 aftpha (ENSELUG00000012264) sertad2b (ENSELUG00000000448) rab1ab (ENSELUG00000012166) ACTR2 (ENSELUG00000001618) SPRED2 (ENSELUG00000012081) meis1b (ENSELUG00000012000) ENSELUG00000011957 ppp3r1a (ENSELUG00000011909) cnrip1a (ENSELUG00000028977) fbxo48 (ENSELUG00000011861) ENSELUG00000030123 ENSELUG00000033337 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000153464.B.z.b ##22 Osteoglossiformes ANCESTRAL SPECIES ENSGT00940000153464.B.z.b ##22 P. kingsleyae MODERN SPECIES 11 ccdc85a (ENSPKIG00000003135) ENSPKIG00000003162 fancl (ENSPKIG00000003202) bcl11aa (ENSPKIG00000003260) papolg (ENSPKIG00000003313) ENSPKIG00000003400 pex13 (ENSPKIG00000003409) SANBR (ENSPKIG00000003437) ENSPKIG00000003545 ENSPKIG00000003715 B3GNT2 (ENSPKIG00000003847) EHBP1 (ENSPKIG00000004032) otx1 (ENSPKIG00000004281) WDPCP (ENSPKIG00000004302) mdh1ab (ENSPKIG00000004347) ugp2b (ENSPKIG00000004404) ##22 ENSPKIG00000004483 ENSPKIG00000004509 LGALSL (ENSPKIG00000004562) ENSPKIG00000004596 ENSPKIG00000004619 slc1a4 (ENSPKIG00000004639) cep68 (ENSPKIG00000004675) rab1ab (ENSPKIG00000004714) zgc:153169 (ENSPKIG00000004744) ACTR2 (ENSPKIG00000004770) SPRED2 (ENSPKIG00000004810) ENSPKIG00000004852 c1d (ENSPKIG00000004877) dnaaf10 (ENSPKIG00000004908) ENSPKIG00000004958 Clupeocephala ANCESTRAL SPECIES 141 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00530000063410.a.r ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q ENSGT00940000157824.i.b ENSGT00940000153408.B.s.a ENSGT00390000008178 ENSGT00390000016883 ENSGT00940000158732 ENSGT00940000156467 ENSGT00940000156983.a.a Euteleosteomorpha ANCESTRAL SPECIES 207 ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.s.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e Acanthomorphata ANCESTRAL SPECIES 114 ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000168989 ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Euacanthomorphacea ANCESTRAL SPECIES 57 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Percomorphaceae ANCESTRAL SPECIES 46 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Tiger tail seahorse MODERN SPECIES 363 c1d (ENSHCOG00000014568) c1d (ENSHCOG00000014589) dnaaf10 (ENSHCOG00000014596) pno1 (ENSHCOG00000014618) ENSHCOG00000014627 cnrip1b (ENSHCOG00000000405) KCNQ5 (ENSHCOG00000014664) ddx43 (ENSHCOG00000014704) eef1a1b (ENSHCOG00000014718) slc17a5 (ENSHCOG00000014744) b3gnt2b (ENSHCOG00000014754) EHBP1 (ENSHCOG00000014911) otx1 (ENSHCOG00000014924) WDPCP (ENSHCOG00000000697) mdh1aa (ENSHCOG00000015008) ugp2b (ENSHCOG00000015044) ##22 peli1b (ENSHCOG00000015073) ENSHCOG00000015117 lgalslb (ENSHCOG00000015138) ciao2b (ENSHCOG00000015153) ENSHCOG00000015156 ENSHCOG00000015184 Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e Ovalentaria ANCESTRAL SPECIES 18 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e Atherinomorphae ANCESTRAL SPECIES 16 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000164807.G.a.a.b ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Oryzias ANCESTRAL SPECIES 6 ENSGT00940000170913 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a ENSGT00940000154877.B ENSGT00940000156225 ENSGT00950000182812.C ENSGT00940000157820.a.b.cb ENSGT00950000183166.a.a.a.b.f ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT01030000235154 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a ENSGT00940000163653 Oryzias_b ANCESTRAL SPECIES 7 ENSGT00660000095541.a.a ENSGT00950000183175.A.c ENSGT00940000170913 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a ENSGT00940000154877.B ENSGT00940000156225 ENSGT00950000182812.C ENSGT00940000157820.a.b.cb ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT01030000235154 ENSGT00390000015405 Indian medaka MODERN SPECIES 27 ENSOMEG00000022699 ENSOMEG00000022707 prorsd1 (ENSOMEG00000022715) OPN4 (ENSOMEG00000022728) ldb3a (ENSOMEG00000022787) bmpr1aa (ENSOMEG00000022835) ENSOMEG00000022851 rps27a (ENSOMEG00000022866) ENSOMEG00000000614 ENSOMEG00000022888 b3gnt2b (ENSOMEG00000022896) EHBP1 (ENSOMEG00000022982) otx1 (ENSOMEG00000023010) WDPCP (ENSOMEG00000023058) MDH1 (ENSOMEG00000023091) ugp2b (ENSOMEG00000023112) ##22 peli1b (ENSOMEG00000023127) ENSOMEG00000023167 ENSOMEG00000023188 lgalslb (ENSOMEG00000023198) actr2a (ENSOMEG00000023221) SPRED2 (ENSOMEG00000023237) ENSOMEG00000023245 ikzf1 (ENSOMEG00000023255) fignl1 (ENSOMEG00000023258) ttl (ENSOMEG00000023276) dnaaf10 (ENSOMEG00000023287) pno1 (ENSOMEG00000023300) ppp3r1a (ENSOMEG00000023323) cnrip1b (ENSOMEG00000023337) KCNQ5 (ENSOMEG00000023390) Javanese ricefish MODERN SPECIES 6 prorsd1 (ENSOJAG00000003319) OPN4 (ENSOJAG00000003269) ldb3a (ENSOJAG00000003132) bmpr1aa (ENSOJAG00000002628) rps27a (ENSOJAG00000002458) ENSOJAG00000002448 b3gnt2b (ENSOJAG00000002438) ENSOJAG00000002417 ENSOJAG00000002407 EHBP1 (ENSOJAG00000002231) otx1 (ENSOJAG00000002138) ENSOJAG00000002126 ENSOJAG00000002113 WDPCP (ENSOJAG00000002012) MDH1 (ENSOJAG00000001886) ugp2b (ENSOJAG00000001808) ##22 peli1b (ENSOJAG00000001747) ENSOJAG00000020511 lgalslb (ENSOJAG00000020506) actr2a (ENSOJAG00000020442) SPRED2 (ENSOJAG00000020417) meis1b (ENSOJAG00000020400) ENSOJAG00000020381 ENSOJAG00000020372 ENSOJAG00000020360 ENSOJAG00000020351 c1d (ENSOJAG00000020345) ENSOJAG00000020334 ENSOJAG00000020324 csgalnact2 (ENSOJAG00000020288) ENSOJAG00000020239 Oryzias_a ANCESTRAL SPECIES 4 ENSGT00940000170913 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a ENSGT00940000154877.B ENSGT00940000156225 ENSGT00950000182812.C ENSGT00940000157820.a.b.cb ENSGT00950000183166.a.a.a.b.f ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT01030000235154 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a ENSGT00940000163653 Japanese Medaka HdrR MODERN SPECIES 6 ENSORLG00000002678 prorsd1 (ENSORLG00000025145) OPN4 (ENSORLG00000002633) ldb3a (ENSORLG00000002622) bmpr1aa (ENSORLG00000002596) ENSORLG00000028617 rps27a (ENSORLG00000029546) ENSORLG00000030264 ENSORLG00000024628 ENSORLG00000002570 b3gnt2b (ENSORLG00000002565) EHBP1 (ENSORLG00000002562) otx1 (ENSORLG00000028142) WDPCP (ENSORLG00000029431) mdh1ab (ENSORLG00000002524) ugp2b (ENSORLG00000002512) ##22 peli1b (ENSORLG00000002477) ENSORLG00000027511 ENSORLG00000022965 lgalslb (ENSORLG00000028938) actr2a (ENSORLG00000002451) SPRED2 (ENSORLG00000002435) meis1b (ENSORLG00000002411) ENSORLG00000023223 ENSORLG00000026767 ENSORLG00000030003 c1d (ENSORLG00000021968) dnaaf10 (ENSORLG00000030098) pno1 (ENSORLG00000002371) ppp3r1a (ENSORLG00000002343) cnrip1b (ENSORLG00000025748) Cyprinodontiformes ANCESTRAL SPECIES 17 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e Aplocheiloidei ANCESTRAL SPECIES 22 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000177342.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a.d.b ENSGT00940000177700 ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00390000001859.f Turquoise killifish MODERN SPECIES 1612 tcea3 (ENSNFUG00015023905) OPRD1B (ENSNFUG00015023936) ENSNFUG00015023938 comtd1 (ENSNFUG00015023943) ENSNFUG00015023949 VDAC2 (ENSNFUG00015023972) ENSNFUG00015024057 ENSNFUG00015024060 B3GNT2B (ENSNFUG00015024061) EHBP1 (ENSNFUG00015024071) ENSNFUG00015024132 OTX1B (ENSNFUG00015024133) WDPCP (ENSNFUG00015024135) ENSNFUG00015024137 mdh1aa (ENSNFUG00015024144) ugp2b (ENSNFUG00015024190) ##22 PELI1B (ENSNFUG00015024315) ENSNFUG00015024317 lgalslb (ENSNFUG00015024326) ENSNFUG00015024333 AFTPHA (ENSNFUG00015024338) ACTR2 (ENSNFUG00015024344) SPRED2A (ENSNFUG00015024353) ENSNFUG00015024354 ENSNFUG00015024358 meis1b (ENSNFUG00015024373) ETAA1 (ENSNFUG00015024421) ENSNFUG00015024428 ENSNFUG00015024436 c1d (ENSNFUG00015024438) dnaaf10 (ENSNFUG00015024444) Mangrove rivulus MODERN SPECIES 3 mtx2 (ENSKMAG00000016098) cdh5 (ENSKMAG00000016073) ENSKMAG00000016061 tmem41ab (ENSKMAG00000016045) GPR155 (ENSKMAG00000015977) ENSKMAG00000015949 ciao2b (ENSKMAG00000015929) ENSKMAG00000015858 ENSKMAG00000015830 ENSKMAG00000015815 b3gnt2b (ENSKMAG00000015797) EHBP1 (ENSKMAG00000015630) otx1 (ENSKMAG00000015570) WDPCP (ENSKMAG00000015541) mdh1aa (ENSKMAG00000015513) ugp2b (ENSKMAG00000015475) ##22 peli1b (ENSKMAG00000015451) ENSKMAG00000015381 lgalslb (ENSKMAG00000015333) ENSKMAG00000015310 ENSKMAG00000015301 ENSKMAG00000015281 actr2a (ENSKMAG00000015243) SPRED2 (ENSKMAG00000015205) meis1b (ENSKMAG00000015139) ENSKMAG00000015108 c1d (ENSKMAG00000015077) ENSKMAG00000015052 ENSKMAG00000015037 ctu2 (ENSKMAG00000015016) cdk1 (ENSKMAG00000014999) Cyprinodontoidei ANCESTRAL SPECIES 14 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000164807.G.a.a.b ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Poeciliinae ANCESTRAL SPECIES 16 ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000157361.b ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000164807.G.a.a.b ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l.q ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e Poecilia ANCESTRAL SPECIES 11 ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000157361.b ENSGT00390000017697.b ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.a.a.a ENSGT00940000160228.i.a.a ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000164807.G.a.a.b ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l.q ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e NAME_6 ANCESTRAL SPECIES 275 ENSGT00940000157361.b ENSGT00390000017697.b ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.a.a.a ENSGT00940000160228.i.a.a ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000164807.G.a.a.b ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l.q Sailfin molly MODERN SPECIES 38 b3gnt2b (ENSPLAG00000019544) EHBP1 (ENSPLAG00000019645) otx1 (ENSPLAG00000019667) ENSPLAG00000019683 MDH1 (ENSPLAG00000019698) ugp2b (ENSPLAG00000019720) ##22 peli1b (ENSPLAG00000019732) ENSPLAG00000019777 lgalslb (ENSPLAG00000019781) ENSPLAG00000019786 ENSPLAG00000019792 ENSPLAG00000019804 actr2a (ENSPLAG00000019837) SPRED2 (ENSPLAG00000019851) MEIS1 (ENSPLAG00000019858) Amazon molly MODERN SPECIES 561 ENSPFOG00000002842 ciao2b (ENSPFOG00000002792) ENSPFOG00000020668 ENSPFOG00000002782 ENSPFOG00000024641 b3gnt2b (ENSPFOG00000020667) EHBP1 (ENSPFOG00000002281) otx1 (ENSPFOG00000002237) WDPCP (ENSPFOG00000001995) MDH1 (ENSPFOG00000001834) ugp2b (ENSPFOG00000001695) ##22 peli1b (ENSPFOG00000001528) ENSPFOG00000001393 lgalslb (ENSPFOG00000001307) ENSPFOG00000001282 ENSPFOG00000023762 actr2a (ENSPFOG00000001196) SPRED2 (ENSPFOG00000001081) Guppy MODERN SPECIES 445 CALHM3 (ENSPREG00000020384) ncapd3 (ENSPREG00000020416) ENSPREG00000020540 RIN2 (ENSPREG00000020566) ENSPREG00000020598 ENSPREG00000020614 ENSPREG00000020631 ciao2b (ENSPREG00000020644) ENSPREG00000020655 ENSPREG00000020793 b3gnt2b (ENSPREG00000021300) EHBP1 (ENSPREG00000021321) otx1 (ENSPREG00000021337) WDPCP (ENSPREG00000021349) MDH1 (ENSPREG00000021368) ugp2b (ENSPREG00000021393) ##22 peli1b (ENSPREG00000021412) ENSPREG00000021444 lgalslb (ENSPREG00000021476) ENSPREG00000021483 ENSPREG00000021487 actr2a (ENSPREG00000000566) SPRED2 (ENSPREG00000000651) meis1b (ENSPREG00000000691) ENSPREG00000000726 c1d (ENSPREG00000000742) dnaaf10 (ENSPREG00000000779) pno1 (ENSPREG00000000793) ppp3r1a (ENSPREG00000000832) cnrip1b (ENSPREG00000000842) KCNQ5 (ENSPREG00000000873) Platyfish MODERN SPECIES 14 hells (ENSXMAG00000005731) CALHM3 (ENSXMAG00000005726) ncapd3 (ENSXMAG00000005697) ENSXMAG00000022977 RIN2 (ENSXMAG00000023405) ENSXMAG00000005661 ENSXMAG00000005660 ENSXMAG00000005658 ciao2b (ENSXMAG00000005652) ENSXMAG00000005623 b3gnt2b (ENSXMAG00000019808) EHBP1 (ENSXMAG00000005611) otx1 (ENSXMAG00000005604) WDPCP (ENSXMAG00000005591) MDH1 (ENSXMAG00000005571) ugp2b (ENSXMAG00000005551) ##22 ENSXMAG00000027229 peli1b (ENSXMAG00000022686) lgalslb (ENSXMAG00000011845) ENSXMAG00000029735 ENSXMAG00000025365 ENSXMAG00000029191 actr2a (ENSXMAG00000011813) SPRED2 (ENSXMAG00000011804) ENSXMAG00000029931 meis1b (ENSXMAG00000011739) ENSXMAG00000027599 c1d (ENSXMAG00000022273) dnaaf10 (ENSXMAG00000029168) pno1 (ENSXMAG00000021459) ppp3r1a (ENSXMAG00000022836) NAME_4 ANCESTRAL SPECIES 132 ENSGT00940000161503.b ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000164807.G.a.a.b ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Sheepshead minnow MODERN SPECIES 569 ENSCVAG00000004877 b3gnt2b (ENSCVAG00000004788) EHBP1 (ENSCVAG00000000800) otx1 (ENSCVAG00000004584) ENSCVAG00000004576 MDH1 (ENSCVAG00000004563) ENSCVAG00000004517 ugp2b (ENSCVAG00000004512) ##22 Mummichog MODERN SPECIES 2306 ENSFHEG00000011575 mtx2 (ENSFHEG00000011569) cdh5 (ENSFHEG00000011531) ENSFHEG00000011472 ENSFHEG00000011437 tmem41ab (ENSFHEG00000011397) GPR155 (ENSFHEG00000000881) ENSFHEG00000011361 ciao2b (ENSFHEG00000000703) b3gnt2b (ENSFHEG00000011347) EHBP1 (ENSFHEG00000000256) otx1 (ENSFHEG00000011199) ENSFHEG00000011182 WDPCP (ENSFHEG00000011173) MDH1 (ENSFHEG00000011156) ugp2b (ENSFHEG00000011098) ##22 peli1b (ENSFHEG00000011027) ENSFHEG00000010952 lgalslb (ENSFHEG00000010890) ENSFHEG00000010885 ENSFHEG00000010883 ENSFHEG00000010874 ENSFHEG00000010863 actr2a (ENSFHEG00000010852) ENSFHEG00000010786 SPRED2 (ENSFHEG00000000242) meis1b (ENSFHEG00000010659) ENSFHEG00000010566 c1d (ENSFHEG00000010545) dnaaf10 (ENSFHEG00000010502) pno1 (ENSFHEG00000010487) Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Pomacentridae ANCESTRAL SPECIES 224 ENSGT00940000160228.i.a.a.c ENSGT00940000177342.a ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 Pomacentridae_A ANCESTRAL SPECIES 104 ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000182958.b.a.b.m.a.a.a ENSGT00730000111005 ENSGT00940000155683 ENSGT00530000063692.b ENSGT00950000183154.a.b ENSGT00390000016757 ENSGT00940000177019 ENSGT00940000157373.l ENSGT00940000165449 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b Amphiprion ANCESTRAL SPECIES 128 ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000182958.b.a.b.m.a.a.a ENSGT00730000111005 ENSGT00940000155683 ENSGT00530000063692.b ENSGT00950000183154.a.b ENSGT00390000016757 ENSGT00940000177019 ENSGT00940000157373.l ENSGT00940000165449 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b Orange clownfish MODERN SPECIES 12 ENSAPEG00000023573 EHBP1 (ENSAPEG00000023607) otx1 (ENSAPEG00000023664) ENSAPEG00000023677 MDH1 (ENSAPEG00000023690) ugp2b (ENSAPEG00000023717) ##22 desi2 (ENSAPEG00000023757) MTRF1L (ENSAPEG00000023778) fbxo5 (ENSAPEG00000023803) vip (ENSAPEG00000023817) ENSAPEG00000000317 ANAPC1 (ENSAPEG00000000359) ENSAPEG00000000536 ENSAPEG00000000568 ENSAPEG00000000621 pank1a (ENSAPEG00000000663) zgc:65997 (ENSAPEG00000000758) nphp1 (ENSAPEG00000000781) ENSAPEG00000000837 malb (ENSAPEG00000000848) mrps5 (ENSAPEG00000000853) Clown anemonefish MODERN SPECIES 2617 MDH1 (ENSAOCG00000000293) UGP2 (ENSAOCG00000006091) ##22 Spiny chromis MODERN SPECIES 66 b3gnt2b (ENSAPOG00000005146) EHBP1 (ENSAPOG00000005245) otx1 (ENSAPOG00000005278) WDPCP (ENSAPOG00000005298) MDH1 (ENSAPOG00000005335) ugp2b (ENSAPOG00000005410) ##22 desi2 (ENSAPOG00000005457) MTRF1L (ENSAPOG00000005515) fbxo5 (ENSAPOG00000005525) vip (ENSAPOG00000005552) ANAPC1 (ENSAPOG00000005760) ENSAPOG00000005801 ENSAPOG00000005837 zgc:65997 (ENSAPOG00000005863) ENSAPOG00000005883 ENSAPOG00000005898 malb (ENSAPOG00000006001) mrps5 (ENSAPOG00000006057) Bicolor damselfish MODERN SPECIES 2038 WDPCP (ENSSPAG00000005091) mdh1aa (ENSSPAG00000005125) UGP2 (ENSSPAG00000005159) ##22 Cichlidae ANCESTRAL SPECIES 13 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Midas cichlid MODERN SPECIES 230 ENSACIG00000013685 ENSACIG00000013670 ENSACIG00000013609 tmem41ab (ENSACIG00000013588) GPR155 (ENSACIG00000013555) ENSACIG00000013460 ciao2b (ENSACIG00000013440) ENSACIG00000013207 ENSACIG00000013085 ENSACIG00000013066 b3gnt2b (ENSACIG00000013061) EHBP1 (ENSACIG00000013008) otx1 (ENSACIG00000012995) WDPCP (ENSACIG00000012952) MDH1 (ENSACIG00000012929) ugp2b (ENSACIG00000012903) ##22 peli1b (ENSACIG00000012890) ENSACIG00000012854 lgalslb (ENSACIG00000012830) ENSACIG00000012820 actr2a (ENSACIG00000012799) SPRED2 (ENSACIG00000012773) meis1b (ENSACIG00000012745) ENSACIG00000012728 c1d (ENSACIG00000012684) dnaaf10 (ENSACIG00000012570) pno1 (ENSACIG00000012543) ppp3r1a (ENSACIG00000012385) cnrip1b (ENSACIG00000012353) KCNQ5 (ENSACIG00000012311) ddx43 (ENSACIG00000012170) Pseudocrenilabrinae ANCESTRAL SPECIES 16 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Nile tilapia MODERN SPECIES 4 mtx2 (ENSONIG00000001332) cdh5 (ENSONIG00000001324) ENSONIG00000026582 tmem41ab (ENSONIG00000001320) GPR155 (ENSONIG00000001317) wipf1 (ENSONIG00000001313) ciao2b (ENSONIG00000001310) ENSONIG00000001289 ENSONIG00000035344 ENSONIG00000034429 b3gnt2b (ENSONIG00000020730) EHBP1 (ENSONIG00000001281) otx1 (ENSONIG00000035027) WDPCP (ENSONIG00000001271) mdh1aa (ENSONIG00000001264) ugp2b (ENSONIG00000001254) ##22 peli1b (ENSONIG00000027571) ENSONIG00000041039 ENSONIG00000028845 ENSONIG00000039915 ENSONIG00000040742 ENSONIG00000004918 ENSONIG00000039754 ENSONIG00000032553 ENSONIG00000008025 lgalslb (ENSONIG00000001248) ENSONIG00000030341 ENSONIG00000039063 actr2a (ENSONIG00000001245) SPRED2 (ENSONIG00000029966) meis1b (ENSONIG00000001236) Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Haplochromini ANCESTRAL SPECIES 10 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Burton s mouthbrooder MODERN SPECIES 318 mtx2 (ENSHBUG00000017811) cdh5 (ENSHBUG00000017838) ENSHBUG00000017845 tmem41ab (ENSHBUG00000017882) GPR155 (ENSHBUG00000017909) ENSHBUG00000017927 ENSHBUG00000017937 ciao2b (ENSHBUG00000017958) ENSHBUG00000017992 ENSHBUG00000018008 b3gnt2b (ENSHBUG00000018017) EHBP1 (ENSHBUG00000018080) otx1 (ENSHBUG00000018104) WDPCP (ENSHBUG00000018121) MDH1 (ENSHBUG00000001045) ugp2b (ENSHBUG00000018209) ##22 peli1b (ENSHBUG00000018272) ENSHBUG00000018319 lgalslb (ENSHBUG00000018349) ENSHBUG00000018356 ENSHBUG00000018375 actr2a (ENSHBUG00000018399) SPRED2 (ENSHBUG00000018425) meis1b (ENSHBUG00000018510) ENSHBUG00000018526 c1d (ENSHBUG00000018531) dnaaf10 (ENSHBUG00000018541) pno1 (ENSHBUG00000018572) ppp3r1a (ENSHBUG00000000555) cnrip1b (ENSHBUG00000018590) Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a ENSGT00940000163653 P. nyererei MODERN SPECIES 349 ENSPNYG00000006956 ENSPNYG00000007006 mtx2 (ENSPNYG00000007071) cdh5 (ENSPNYG00000007107) ENSPNYG00000007119 tmem41ab (ENSPNYG00000007133) GPR155 (ENSPNYG00000007158) wipf1a (ENSPNYG00000007173) ciao2b (ENSPNYG00000007207) ENSPNYG00000007421 b3gnt2b (ENSPNYG00000008156) EHBP1 (ENSPNYG00000008205) otx1 (ENSPNYG00000008345) ENSPNYG00000008363 MDH1 (ENSPNYG00000008390) ugp2b (ENSPNYG00000008441) ##22 peli1b (ENSPNYG00000008495) ENSPNYG00000008530 lgalslb (ENSPNYG00000008578) ENSPNYG00000008600 actr2a (ENSPNYG00000008624) SPRED2 (ENSPNYG00000008682) meis1b (ENSPNYG00000008708) ENSPNYG00000008745 ENSPNYG00000008771 c1d (ENSPNYG00000008789) dnaaf10 (ENSPNYG00000008828) pno1 (ENSPNYG00000008942) ppp3r1a (ENSPNYG00000008986) cnrip1b (ENSPNYG00000008998) KCNQ5 (ENSPNYG00000009016) Haplochromini_B ANCESTRAL SPECIES 5 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a ENSGT00940000163653 Eastern happy MODERN SPECIES 4 mtx2 (ENSACLG00000026900) cdh5 (ENSACLG00000026891) ENSACLG00000026887 ENSACLG00000026881 tmem41ab (ENSACLG00000026863) GPR155 (ENSACLG00000026841) wipf1a (ENSACLG00000026823) ciao2b (ENSACLG00000026816) ENSACLG00000026798 ENSACLG00000026787 b3gnt2b (ENSACLG00000026781) EHBP1 (ENSACLG00000026697) otx1 (ENSACLG00000026686) WDPCP (ENSACLG00000026647) MDH1 (ENSACLG00000026557) ugp2b (ENSACLG00000026535) ##22 peli1b (ENSACLG00000026494) ENSACLG00000026411 lgalslb (ENSACLG00000026386) ENSACLG00000026357 actr2a (ENSACLG00000026334) SPRED2 (ENSACLG00000026311) meis1b (ENSACLG00000026249) ENSACLG00000026219 c1d (ENSACLG00000026206) dnaaf10 (ENSACLG00000026190) pno1 (ENSACLG00000026167) ppp3r1a (ENSACLG00000026154) cnrip1b (ENSACLG00000026147) KCNQ5 (ENSACLG00000026094) ddx43 (ENSACLG00000026081) Zebra mbuna MODERN SPECIES 1095 cdh5 (ENSMZEG00005027318) ENSMZEG00005027319 ENSMZEG00005027320 tmem41ab (ENSMZEG00005027321) GPR155 (ENSMZEG00005027322) wipf1a (ENSMZEG00005027323) ciao2b (ENSMZEG00005027324) ENSMZEG00005027325 ENSMZEG00005027326 b3gnt2b (ENSMZEG00005027327) EHBP1 (ENSMZEG00005027328) ENSMZEG00005027329 otx1 (ENSMZEG00005027330) WDPCP (ENSMZEG00005027331) MDH1 (ENSMZEG00005027332) ugp2b (ENSMZEG00005027333) ##22 peli1b (ENSMZEG00005027334) ENSMZEG00005027335 lgalslb (ENSMZEG00005027336) ENSMZEG00005027337 actr2a (ENSMZEG00005027338) SPRED2 (ENSMZEG00005027339) meis1b (ENSMZEG00005027341) ENSMZEG00005027342 c1d (ENSMZEG00005027343) dnaaf10 (ENSMZEG00005027344) pno1 (ENSMZEG00005027345) ppp3r1a (ENSMZEG00005027346) cnrip1b (ENSMZEG00005027347) KCNQ5 (ENSMZEG00005027348) ddx43 (ENSMZEG00005027349) Lyretail cichlid MODERN SPECIES 295 ENSNBRG00000009387 ENSNBRG00000009407 ENSNBRG00000009484 mtx2 (ENSNBRG00000009500) cdh5 (ENSNBRG00000009513) ENSNBRG00000009525 tmem41ab (ENSNBRG00000009547) ENSNBRG00000009564 ciao2b (ENSNBRG00000009588) ENSNBRG00000009721 b3gnt2b (ENSNBRG00000010244) EHBP1 (ENSNBRG00000010267) otx1 (ENSNBRG00000010309) WDPCP (ENSNBRG00000010324) MDH1 (ENSNBRG00000010369) ugp2b (ENSNBRG00000010404) ##22 peli1b (ENSNBRG00000010433) ENSNBRG00000010455 lgalslb (ENSNBRG00000010508) ENSNBRG00000010532 actr2a (ENSNBRG00000010551) SPRED2 (ENSNBRG00000010593) meis1b (ENSNBRG00000010657) ENSNBRG00000010688 c1d (ENSNBRG00000010704) dnaaf10 (ENSNBRG00000010737) pno1 (ENSNBRG00000010839) ppp3r1a (ENSNBRG00000010865) cnrip1b (ENSNBRG00000010873) ENSNBRG00000010894 ddx43 (ENSNBRG00000010942) Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e Eupercaria ANCESTRAL SPECIES 15 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000162333 ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Tetraodontidae ANCESTRAL SPECIES 7 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000162333 ENSGT01100000263533.b.a.a.a ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00950000183091.A.b ENSGT00390000004284.e ENSGT00940000155933.b.a Tetraodon DUPLICATION Tetraodon MODERN SPECIES 9 cdh11 (ENSTNIG00000009849) chrna1 (ENSTNIG00000009848) ENSTNIG00000001782 ENSTNIG00000001779 ENSTNIG00000001778 mtx2 (ENSTNIG00000009847) ENSTNIG00000009846 ENSTNIG00000009845 ciao2b (ENSTNIG00000009844) b3gnt2b (ENSTNIG00000009843) ENSTNIG00000009842 EHBP1 (ENSTNIG00000009841) otx1 (ENSTNIG00000009840) WDPCP (ENSTNIG00000009839) MDH1 (ENSTNIG00000009838) ugp2b (ENSTNIG00000009835) ##22 peli1b (ENSTNIG00000009836) ugp2b (ENSTNIG00000009837) ##22 peli1b (ENSTNIG00000009834) ENSTNIG00000009833 lgalslb (ENSTNIG00000009832) ENSTNIG00000009831 actr2a (ENSTNIG00000009830) SPRED2 (ENSTNIG00000009829) meis1b (ENSTNIG00000009828) c1d (ENSTNIG00000009827) dnaaf10 (ENSTNIG00000009826) pno1 (ENSTNIG00000009825) ppp3r1a (ENSTNIG00000009824) KCNQ5 (ENSTNIG00000009823) ddx43 (ENSTNIG00000009822) Tetraodon MODERN SPECIES 9 ENSTNIG00000001782 ENSTNIG00000001779 ENSTNIG00000001778 mtx2 (ENSTNIG00000009847) ENSTNIG00000009846 ENSTNIG00000009845 ciao2b (ENSTNIG00000009844) b3gnt2b (ENSTNIG00000009843) ENSTNIG00000009842 EHBP1 (ENSTNIG00000009841) otx1 (ENSTNIG00000009840) WDPCP (ENSTNIG00000009839) MDH1 (ENSTNIG00000009838) ugp2b (ENSTNIG00000009835) ##22 peli1b (ENSTNIG00000009836) ugp2b (ENSTNIG00000009837) ##22 peli1b (ENSTNIG00000009834) ENSTNIG00000009833 lgalslb (ENSTNIG00000009832) ENSTNIG00000009831 actr2a (ENSTNIG00000009830) SPRED2 (ENSTNIG00000009829) meis1b (ENSTNIG00000009828) c1d (ENSTNIG00000009827) dnaaf10 (ENSTNIG00000009826) pno1 (ENSTNIG00000009825) ppp3r1a (ENSTNIG00000009824) KCNQ5 (ENSTNIG00000009823) ddx43 (ENSTNIG00000009822) eef1a1b (ENSTNIG00000009821) slc17a5 (ENSTNIG00000009820) Fugu MODERN SPECIES 16 hoxd4b (ENSTRUG00000028105) mtx2 (ENSTRUG00000009663) cdh5 (ENSTRUG00000009855) ENSTRUG00000009938 tmem41ab (ENSTRUG00000009946) GPR155 (ENSTRUG00000010023) waspipb (ENSTRUG00000010261) ciao2b (ENSTRUG00000010273) ENSTRUG00000010354 ENSTRUG00000030779 b3gnt2b (ENSTRUG00000010977) EHBP1 (ENSTRUG00000011025) otx1 (ENSTRUG00000011049) WDPCP (ENSTRUG00000011105) MDH1 (ENSTRUG00000025836) ugp2b (ENSTRUG00000020420) ##22 peli1b (ENSTRUG00000011542) ENSTRUG00000019803 lgalslb (ENSTRUG00000011696) ENSTRUG00000021877 ENSTRUG00000011707 actr2a (ENSTRUG00000011717) SPRED2 (ENSTRUG00000011904) meis1b (ENSTRUG00000011993) ENSTRUG00000022857 c1d (ENSTRUG00000012245) pno1 (ENSTRUG00000012470) dnaaf10 (ENSTRUG00000012303) cnrip1b (ENSTRUG00000012558) KCNQ5 (ENSTRUG00000012601) ddx43 (ENSTRUG00000012795) Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000167313 ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000162333 ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Ballan wrasse MODERN SPECIES 123 MDH1 (ENSLBEG00000008750) ugp2b (ENSLBEG00000008705) ##22 peli1b (ENSLBEG00000008670) ENSLBEG00000008607 lgalslb (ENSLBEG00000008580) ENSLBEG00000008560 ENSLBEG00000008542 ACTR2 (ENSLBEG00000008499) SPRED2 (ENSLBEG00000008460) meis1b (ENSLBEG00000008402) ENSLBEG00000008369 c1d (ENSLBEG00000008351) dnaaf10 (ENSLBEG00000008344) pno1 (ENSLBEG00000008305) ppp3r1a (ENSLBEG00000008282) cnrip1b (ENSLBEG00000008256) KCNQ5 (ENSLBEG00000008083) Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000162333 ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Perciformes ANCESTRAL SPECIES 17 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01030000235205 ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a.h ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Cottioidei ANCESTRAL SPECIES 17 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000177342.a ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01030000234576.D.a.a.b.a.a.a.a.b ENSGT00940000154556.a.b ENSGT00940000156841.a.a.h ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.ab ENSGT00390000004284.e ENSGT00940000155933.b.a ENSGT00940000163653 Lumpfish MODERN SPECIES 6 ENSCLMG00005009703 ENSCLMG00005009701 ENSCLMG00005009697 TMEM41A (ENSCLMG00005009692) ENSCLMG00005009659 WIPF1 (ENSCLMG00005009655) ciao2b (ENSCLMG00005009654) ENSCLMG00005009652 ENSCLMG00005009648 b3gnt2b (ENSCLMG00005009647) ENSCLMG00005009645 EHBP1 (ENSCLMG00005009639) otx1 (ENSCLMG00005009635) ENSCLMG00005009634 MDH1 (ENSCLMG00005009623) ugp2b (ENSCLMG00005009607) ##22 ENSCLMG00005009603 peli1b (ENSCLMG00005009602) ENSCLMG00005009551 lgalslb (ENSCLMG00005009545) ENSCLMG00005009542 ENSCLMG00005009540 ACTR2 (ENSCLMG00005009470) SPRED2 (ENSCLMG00005009468) ENSCLMG00005009467 ENSCLMG00005009466 c1d (ENSCLMG00005009465) dnaaf10 (ENSCLMG00005009463) pno1 (ENSCLMG00005009452) ENSCLMG00005009451 cnrip1b (ENSCLMG00005009450) Stickleback MODERN SPECIES 288 MDH1 (ENSGACG00000000973) ugp2b (ENSGACG00000000991) ##22 KLHL10 (ENSGACG00000001007) ENSGACG00000001012 Perciformes_a ANCESTRAL SPECIES 16 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01030000235205 ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a.h ENSGT00940000156327.l ENSGT01030000235154 ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Pike perch MODERN SPECIES 30 mtx2 (ENSSLUG00000016529) cdh5 (ENSSLUG00000016548) ENSSLUG00000016553 tmem41ab (ENSSLUG00000016558) GPR155 (ENSSLUG00000016573) ENSSLUG00000016614 ENSSLUG00000016618 ENSSLUG00000016623 ciao2b (ENSSLUG00000016626) ENSSLUG00000016721 b3gnt2b (ENSSLUG00000018228) EHBP1 (ENSSLUG00000018256) otx1 (ENSSLUG00000018349) WDPCP (ENSSLUG00000018353) mdh1aa (ENSSLUG00000018360) ugp2b (ENSSLUG00000005472) ##22 peli1b (ENSSLUG00000007153) ENSSLUG00000007184 lgalslb (ENSSLUG00000007241) ENSSLUG00000007259 ENSSLUG00000007265 ENSSLUG00000007269 ENSSLUG00000007277 ENSSLUG00000007287 ACTR2 (ENSSLUG00000007306) SPRED2 (ENSSLUG00000007558) meis1b (ENSSLUG00000007585) ENSSLUG00000008032 c1d (ENSSLUG00000008045) dnaaf10 (ENSSLUG00000008055) pno1 (ENSSLUG00000008114) Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01030000234576.D.a.a.b.a.a.a.a.b ENSGT00940000177700 ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01030000234576.D.a.a.b.a.a.a.a.b ENSGT00940000177700 ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Large yellow croaker MODERN SPECIES 482 mpv17 (ENSLCRG00005020960) ENSLCRG00005020379 slc30a2 (ENSLCRG00005020373) ENSLCRG00005020372 ENSLCRG00005020370 ENSLCRG00005020369 ENSLCRG00005020368 clvs2 (ENSLCRG00005020367) smpdl3a (ENSLCRG00005020366) fabp7b (ENSLCRG00005020365) b3gnt2b (ENSLCRG00005020364) EHBP1 (ENSLCRG00005020360) otx1 (ENSLCRG00005020355) WDPCP (ENSLCRG00005020354) MDH1 (ENSLCRG00005020343) ugp2b (ENSLCRG00005019939) ##22 PRKCE (ENSLCRG00005019351) epas1b (ENSLCRG00005019258) European seabass MODERN SPECIES 1 ENSDLAG00005015719 ENSDLAG00005015686 ENSDLAG00005015679 ENSDLAG00005015657 ENSDLAG00005029414 ENSDLAG00005015378 ENSDLAG00005015360 ENSDLAG00005015339 ENSDLAG00005014200 ENSDLAG00005028610 b3gnt2b (ENSDLAG00005028854) EHBP1 (ENSDLAG00005014039) otx1 (ENSDLAG00005033458) WDPCP (ENSDLAG00005013917) MDH1 (ENSDLAG00005027998) ugp2b (ENSDLAG00005012869) ##22 peli1b (ENSDLAG00005012804) ENSDLAG00005012591 LGALSL (ENSDLAG00005027623) ENSDLAG00005012530 ENSDLAG00005012508 ACTR2 (ENSDLAG00005012437) SPRED2 (ENSDLAG00005034776) MEIS1 (ENSDLAG00005011711) ENSDLAG00005011679 C1D (ENSDLAG00005034609) PNO1 (ENSDLAG00005011598) PPP3R1 (ENSDLAG00005033179) KCNQ5 (ENSDLAG00005010946) CGAS (ENSDLAG00005010821) EEF1A1 (ENSDLAG00005027413) Gilthead seabream MODERN SPECIES 6 ENSSAUG00010004599 mtx2 (ENSSAUG00010004520) cdh5 (ENSSAUG00010004511) ENSSAUG00010004509 tmem41ab (ENSSAUG00010004502) GPR155 (ENSSAUG00010004440) ENSSAUG00010004429 ciao2b (ENSSAUG00010004424) ENSSAUG00010003745 ENSSAUG00010003703 b3gnt2b (ENSSAUG00010003701) EHBP1 (ENSSAUG00010003566) otx1 (ENSSAUG00010003536) WDPCP (ENSSAUG00010003517) mdh1aa (ENSSAUG00010003388) ugp2b (ENSSAUG00010001888) ##22 peli1b (ENSSAUG00010001780) ENSSAUG00010001623 lgalslb (ENSSAUG00010001580) ENSSAUG00010001562 ENSSAUG00010001554 ENSSAUG00010019559 ENSSAUG00010019557 ENSSAUG00010019554 ACTR2 (ENSSAUG00010019253) SPRED2 (ENSSAUG00010019238) meis1b (ENSSAUG00010019201) ENSSAUG00010019192 c1d (ENSSAUG00010019188) pno1 (ENSSAUG00010019182) dnaaf10 (ENSSAUG00010019181) Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e Anabantaria ANCESTRAL SPECIES 17 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Anabantoidei ANCESTRAL SPECIES 17 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Climbing perch MODERN SPECIES 6 ENSATEG00000016381 ENSATEG00000016357 ENSATEG00000016342 ENSATEG00000030045 ENSATEG00000016253 ENSATEG00000016233 ENSATEG00000016223 ENSATEG00000016209 ENSATEG00000013894 ENSATEG00000013581 b3gnt2b (ENSATEG00000013573) EHBP1 (ENSATEG00000013475) otx1 (ENSATEG00000013437) WDPCP (ENSATEG00000013390) MDH1 (ENSATEG00000013346) ugp2b (ENSATEG00000013298) ##22 peli1b (ENSATEG00000013249) ENSATEG00000013162 LGALSL (ENSATEG00000027905) ENSATEG00000013084 ENSATEG00000028886 ACTR2 (ENSATEG00000013034) SPRED2 (ENSATEG00000013004) MEIS1 (ENSATEG00000012952) ENSATEG00000012939 C1D (ENSATEG00000012922) pno1 (ENSATEG00000012887) DNAAF10 (ENSATEG00000012915) ENSATEG00000027106 KCNQ5 (ENSATEG00000012797) ddx43 (ENSATEG00000012664) Siamese fighting fish MODERN SPECIES 6 ENSBSLG00000019832 mtx2 (ENSBSLG00000019798) cdh5 (ENSBSLG00000019764) ENSBSLG00000019737 tmem41ab (ENSBSLG00000019735) GPR155 (ENSBSLG00000019629) ENSBSLG00000019611 ciao2b (ENSBSLG00000019605) ENSBSLG00000019449 ENSBSLG00000019316 b3gnt2b (ENSBSLG00000019315) EHBP1 (ENSBSLG00000019193) otx1 (ENSBSLG00000019164) WDPCP (ENSBSLG00000019147) MDH1 (ENSBSLG00000019042) ugp2b (ENSBSLG00000018667) ##22 peli1b (ENSBSLG00000018653) ENSBSLG00000018627 lgalslb (ENSBSLG00000018607) ENSBSLG00000018593 actr2a (ENSBSLG00000018376) SPRED2 (ENSBSLG00000018342) meis1b (ENSBSLG00000017627) ENSBSLG00000017560 c1d (ENSBSLG00000017549) dnaaf10 (ENSBSLG00000017449) pno1 (ENSBSLG00000017358) ppp3r1a (ENSBSLG00000017314) ENSBSLG00000017307 cnrip1b (ENSBSLG00000017289) ENSBSLG00000016785 Zig-zag eel MODERN SPECIES 6 ENSMAMG00000022378 ENSMAMG00000022377 ENSMAMG00000022376 ENSMAMG00000022375 ENSMAMG00000022373 ENSMAMG00000022372 ENSMAMG00000025775 ENSMAMG00000022370 ENSMAMG00000025255 ENSMAMG00000022263 b3gnt2b (ENSMAMG00000022230) EHBP1 (ENSMAMG00000022226) otx1 (ENSMAMG00000022224) WDPCP (ENSMAMG00000022221) MDH1 (ENSMAMG00000022218) ugp2b (ENSMAMG00000022214) ##22 peli1b (ENSMAMG00000022208) ENSMAMG00000022200 LGALSL (ENSMAMG00000022198) AFTPH (ENSMAMG00000022192) actr2b (ENSMAMG00000022188) SPRED2 (ENSMAMG00000025530) MEIS1 (ENSMAMG00000022171) ENSMAMG00000022164 C1D (ENSMAMG00000022156) pno1 (ENSMAMG00000022144) DNAAF10 (ENSMAMG00000022141) ENSMAMG00000022136 KCNQ5 (ENSMAMG00000022134) ddx43 (ENSMAMG00000022128) CGAS (ENSMAMG00000022124) Carangaria ANCESTRAL SPECIES 19 ENSGT00940000158988.a.b ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00910000144296 ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000166594 ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Carangaria_A ANCESTRAL SPECIES 25 ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01030000235205 ENSGT00940000166594 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e Seriola ANCESTRAL SPECIES 17 ENSGT00950000182919.C ENSGT00940000165928 ENSGT00940000165226 ENSGT00940000162528 ENSGT00390000004153.d ENSGT00940000160228.i.a.a ENSGT00940000157824.i.b ENSGT00910000144296 ENSGT00940000167313 ENSGT00390000017697.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT01100000263491.a.a.c.b ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b Yellowtail amberjack MODERN SPECIES 2948 WDPCP (ENSSLDG00000017711) mdh1aa (ENSSLDG00000017660) ENSSLDG00000017640 ENSSLDG00000017626 ugp2b (ENSSLDG00000017597) ##22 peli1b (ENSSLDG00000017579) ENSSLDG00000017547 lgalslb (ENSSLDG00000017531) ENSSLDG00000017510 ENSSLDG00000017491 ENSSLDG00000017479 ACTR2 (ENSSLDG00000017448) SPRED2 (ENSSLDG00000017425) meis1b (ENSSLDG00000017406) ENSSLDG00000017390 c1d (ENSSLDG00000017371) dnaaf10 (ENSSLDG00000017358) pno1 (ENSSLDG00000017330) ppp3r1a (ENSSLDG00000017313) cnrip1b (ENSSLDG00000017291) Greater amberjack MODERN SPECIES 72 ENSSDUG00000020876 mtx2 (ENSSDUG00000020855) cdh5 (ENSSDUG00000020824) ENSSDUG00000020807 TMEM41A (ENSSDUG00000020800) GPR155 (ENSSDUG00000020739) ENSSDUG00000020702 ENSSDUG00000020688 ciao2b (ENSSDUG00000020677) b3gnt2b (ENSSDUG00000020673) EHBP1 (ENSSDUG00000020579) otx1 (ENSSDUG00000020542) WDPCP (ENSSDUG00000020512) mdh1aa (ENSSDUG00000020483) ENSSDUG00000020458 ugp2b (ENSSDUG00000020436) ##22 ENSSDUG00000020421 ENSSDUG00000020392 lgalslb (ENSSDUG00000020375) ENSSDUG00000020372 ENSSDUG00000020365 ENSSDUG00000020354 ENSSDUG00000020338 ACTR2 (ENSSDUG00000020311) SPRED2 (ENSSDUG00000020295) meis1b (ENSSDUG00000020244) ENSSDUG00000020231 c1d (ENSSDUG00000020213) dnaaf10 (ENSSDUG00000020203) pno1 (ENSSDUG00000020189) ppp3r1a (ENSSDUG00000020180) Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 33 ENSLCAG00010013366 ENSLCAG00010013374 b3gnt2b (ENSLCAG00010013377) EHBP1 (ENSLCAG00010013383) otx1 (ENSLCAG00010013390) WDPCP (ENSLCAG00010013399) mdh1aa (ENSLCAG00010013412) ugp2b (ENSLCAG00010013444) ##22 peli1b (ENSLCAG00010013496) ENSLCAG00010013511 lgalslb (ENSLCAG00010013522) ENSLCAG00010013527 ENSLCAG00010013530 ENSLCAG00010013537 ACTR2 (ENSLCAG00010013559) SPRED2 (ENSLCAG00010013603) meis1b (ENSLCAG00010013649) ENSLCAG00010014062 c1d (ENSLCAG00010014064) dnaaf10 (ENSLCAG00010014068) pno1 (ENSLCAG00010014077) ppp3r1a (ENSLCAG00010014087) cnrip1b (ENSLCAG00010014096) Barramundi perch MODERN SPECIES 1756 UGP2 (ENSLCAG00010009436) ##22 Pleuronectoidei ANCESTRAL SPECIES 60 ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000166594 ENSGT00940000154186.a.q ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 ENSGT00940000156530.c.`b.b ENSGT00390000004284.e ENSGT00940000155933.b.a Tongue sole MODERN SPECIES 3 ENSCSEG00000000869 ENSCSEG00000000875 slc1a4 (ENSCSEG00000000884) sertad2b (ENSCSEG00000000893) pcgf6 (ENSCSEG00000000895) ENSCSEG00000000901 vdac2 (ENSCSEG00000000908) comtd1 (ENSCSEG00000000915) ENSCSEG00000000924 polh (ENSCSEG00000000930) GTPBP2 (ENSCSEG00000000936) EHBP1 (ENSCSEG00000000951) otx1 (ENSCSEG00000000992) WDPCP (ENSCSEG00000001003) MDH1 (ENSCSEG00000001022) ugp2b (ENSCSEG00000001237) ##22 CCDC88A (ENSCSEG00000001262) GBF1 (ENSCSEG00000001430) ENSCSEG00000001453 macroh2a2 (ENSCSEG00000001483) ENSCSEG00000001495 ENSCSEG00000001568 ENSCSEG00000001580 lhb (ENSCSEG00000001582) rtn4a (ENSCSEG00000001594) ENSCSEG00000001598 rps27a (ENSCSEG00000001603) bmpr1aa (ENSCSEG00000001608) ldb3a (ENSCSEG00000001614) ENSCSEG00000001621 tspan14 (ENSCSEG00000001627) Turbot MODERN SPECIES 6 LHbeta (ENSSMAG00000005094) ENSSMAG00000032282 ENSSMAG00000005131 ENSSMAG00000005146 ENSSMAG00000005156 ENSSMAG00000005228 ENSSMAG00000006032 ENSSMAG00000006082 ENSSMAG00000006131 ENSSMAG00000006166 si:ch1073-126c3.2 (ENSSMAG00000006174) ENSSMAG00000006181 ENSSMAG00000026344 ENSSMAG00000006235 MDH1 (ENSSMAG00000006275) ENSSMAG00000006305 ##22 ENSSMAG00000006334 ENSSMAG00000006366 LGALSL (ENSSMAG00000026617) WDPCP (ENSSMAG00000006459) otx1 (ENSSMAG00000034338) EHBP1 (ENSSMAG00000006498) b3gnt2b (ENSSMAG00000006538) ENSSMAG00000032801 ENSSMAG00000008173 ENSSMAG00000008104 ENSSMAG00000033224 ENSSMAG00000022976 ENSSMAG00000007832 ENSSMAG00000007765 ENSSMAG00000028253 Pinecone sodierfish MODERN SPECIES 6 cdh5 (ENSMMDG00005001225) mtx2 (ENSMMDG00005001248) ENSMMDG00005001267 ENSMMDG00005001290 ENSMMDG00005001306 ENSMMDG00005001408 ciao2b (ENSMMDG00005001424) ENSMMDG00005001501 ENSMMDG00005002044 b3gnt2b (ENSMMDG00005002046) EHBP1 (ENSMMDG00005002064) ENSMMDG00005002101 otx1 (ENSMMDG00005002103) WDPCP (ENSMMDG00005002107) MDH1 (ENSMMDG00005002128) ugp2b (ENSMMDG00005002214) ##22 peli1b (ENSMMDG00005004574) ENSMMDG00005004598 lgalslb (ENSMMDG00005004651) ENSMMDG00005004660 ENSMMDG00005004671 ACTR2 (ENSMMDG00005004705) SPRED2 (ENSMMDG00005005012) meis1b (ENSMMDG00005005050) ENSMMDG00005005164 c1d (ENSMMDG00005005173) dnaaf10 (ENSMMDG00005005183) pno1 (ENSMMDG00005005242) cnrip1b (ENSMMDG00005005245) KCNQ5 (ENSMMDG00005005265) ddx43 (ENSMMDG00005006480) Cod MODERN SPECIES 6 ENSGMOG00000030275 ENSGMOG00000028329 ENSGMOG00000033298 ENSGMOG00000035683 ENSGMOG00000003918 ENSGMOG00000030799 ENSGMOG00000016878 ENSGMOG00000032231 ENSGMOG00000036331 ENSGMOG00000029729 ENSGMOG00000034385 ENSGMOG00000032405 ENSGMOG00000033111 ENSGMOG00000036714 ENSGMOG00000034339 ugp2b (ENSGMOG00000010912) ##22 ENSGMOG00000010919 ENSGMOG00000010610 ENSGMOG00000033240 ENSGMOG00000010624 ENSGMOG00000024915 ENSGMOG00000032003 ENSGMOG00000008114 aprt (ENSGMOG00000002470) ENSGMOG00000030481 PIEZO1 (ENSGMOG00000003349) ENSGMOG00000025080 ENSGMOG00000033105 ENSGMOG00000037231 ENSGMOG00000023349 ENSGMOG00000036385 Protacanthopterygii ANCESTRAL SPECIES 4 ENSGT00940000157509.a.f ENSGT00940000156327.l.o ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.s.a.b ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234.c ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.b ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000177700 ENSGT01050000244843.d.f.b ENSGT00940000157081 ENSGT00940000155080 ENSGT00940000165329 ENSGT00950000183101.a.b.b.a.a ENSGT00940000160615.a.b ENSGT00950000183136.b.a.a ENSGT00940000155081.D ENSGT00390000002581 ENSGT00940000158276 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 273 ENSGT00940000157597.i ENSGT00940000161234.c ENSGT00390000016551.g ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b.e ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.b.b.a.b ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587.a ENSGT00940000166587.b.a ENSGT00940000155337.ab ENSGT00940000177700 ENSGT01050000244843.d.f.b.b.b ENSGT00940000157081 ENSGT00940000155080 ENSGT00940000163741 ENSGT00940000165329 ENSGT00950000183136.b.a.a ENSGT00940000155081.D.u.a ENSGT00390000002581 ENSGT00940000158276 Salmoninae_a ANCESTRAL SPECIES 11 ENSGT00940000157597.i ENSGT00940000161234.c ENSGT00390000016551.g ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b.e ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.b.b.a.b ENSGT00950000183050.b.b.b.a.a.a.a.e ENSGT00940000166587.a ENSGT00940000166587.b.a ENSGT00940000155337.ab ENSGT01010000225286 ENSGT01050000244843.d.f.b.b.b ENSGT00940000157081 ENSGT00940000155080 ENSGT00940000163741 ENSGT00940000165329 ENSGT00950000183136.b.a.a ENSGT00940000155081.D.u.a ENSGT00390000002581 ENSGT00940000158276 Salmo ANCESTRAL SPECIES 29 ENSGT00940000157597.i ENSGT00940000161234.c ENSGT00390000016551.g.b ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b.e ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.b.b.a.a ENSGT00950000183050.b.b.b.a.a.a.a.f ENSGT00940000166587.a ENSGT00940000166587.b.a ENSGT00940000155337.ab.d ENSGT00940000154186.a.q.c ENSGT01050000244843.d.f.b.b.a.a.a ENSGT00940000157081 ENSGT00940000155080.m ENSGT00940000165329 ENSGT00950000183136.b.a.a ENSGT00940000155081.D.u.a ENSGT00390000002581 ENSGT00940000158276 ENSGT00940000157935.b Atlantic salmon MODERN SPECIES UB2D4 (ENSSSAG00000000166) ENSSSAG00000000164 ENSSSAG00000060340 ENSSSAG00000110873 ENSSSAG00000000159 ENSSSAG00000062472 ENSSSAG00000057531 ENSSSAG00000021967 ENSSSAG00000088767 ENSSSAG00000098410 ENSSSAG00000098224 ENSSSAG00000115891 EHBP1 (ENSSSAG00000084388) WDPCP (ENSSSAG00000120781) MDH1 (ENSSSAG00000052128) ugp2b (ENSSSAG00000082064) ##22 ENSSSAG00000088036 peli1b (ENSSSAG00000118555) ENSSSAG00000001253 ENSSSAG00000103788 LGALSL (ENSSSAG00000083428) ENSSSAG00000098259 ENSSSAG00000061071 ENSSSAG00000119645 ENSSSAG00000087311 ENSSSAG00000001213 ENSSSAG00000096529 ENSSSAG00000090377 ENSSSAG00000047198 PHF3 (ENSSSAG00000047183) ENSSSAG00000043941 River trout MODERN SPECIES 9 ENSSTUG00000014712 ENSSTUG00000014728 ENSSTUG00000014744 SPRED2 (ENSSTUG00000014753) ENSSTUG00000014761 papolg (ENSSTUG00000014941) ENSSTUG00000018261 rel (ENSSTUG00000018274) pex13 (ENSSTUG00000018324) SANBR (ENSSTUG00000018341) XPO1 (ENSSTUG00000018409) ENSSTUG00000018565 ENSSTUG00000018570 ENSSTUG00000018582 MDH1 (ENSSTUG00000018603) ugp2b (ENSSTUG00000018863) ##22 ENSSTUG00000019490 ENSSTUG00000019497 peli1b (ENSSTUG00000019507) ENSSTUG00000019570 ENSSTUG00000019682 lgalslb (ENSSTUG00000019685) ENSSTUG00000019694 ENSSTUG00000019701 ENSSTUG00000019718 ENSSTUG00000019746 slc1a4 (ENSSTUG00000019819) ENSSTUG00000019864 ENSSTUG00000019910 zgc:171579 (ENSSTUG00000019995) ADGRB3 (ENSSTUG00000020006) Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000157597.i ENSGT00940000161234.c ENSGT00390000016551.h.a.a ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b.e ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.b.a ENSGT00950000183050.b.b.b.a.a.a.a.f ENSGT00940000166587.b.b ENSGT00940000166587.a ENSGT00940000166587.b.a ENSGT00940000155337.ab ENSGT01010000225286 ENSGT01050000244843.d.f.b.b.b ENSGT00940000157081 ENSGT00940000155080 ENSGT00940000160615.a.b ENSGT00950000183136.b.a.a ENSGT00390000002581 ENSGT00940000158276 ENSGT00940000157260.t.s.a Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 15 otx1 (ENSOMYG00000044589) ENSOMYG00000067498 ENSOMYG00000066146 WDPCP (ENSOMYG00000051782) MDH1 (ENSOMYG00000068231) ugp2b (ENSOMYG00000062041) ##22 ENSOMYG00000064319 ENSOMYG00000073561 ENSOMYG00000052586 ENSOMYG00000050522 ENSOMYG00000058969 ENSOMYG00000054025 ENSOMYG00000047940 LGALSL (ENSOMYG00000048473) ENSOMYG00000060292 ENSOMYG00000076738 ENSOMYG00000069645 ENSOMYG00000062764 ENSOMYG00000063026 ENSOMYG00000064170 ENSOMYG00000000629 Rainbow trout MODERN SPECIES ENSOMYG00000064626 zgc:172136 (ENSOMYG00000054498) fam135a (ENSOMYG00000051623) col9a1b (ENSOMYG00000054850) ENSOMYG00000071883 ENSOMYG00000050784 ENSOMYG00000038604 lmbrd1 (ENSOMYG00000061846) ENSOMYG00000077328 ENSOMYG00000076170 ENSOMYG00000066415 ENSOMYG00000036957 ADGRB3 (ENSOMYG00000001155) ENSOMYG00000064778 MDH1 (ENSOMYG00000000871) ugp2b (ENSOMYG00000052320) ##22 ENSOMYG00000000901 ENSOMYG00000076860 ENSOMYG00000044500 ENSOMYG00000053611 LGALSL (ENSOMYG00000064790) ENSOMYG00000058334 ENSOMYG00000062237 ENSOMYG00000000672 ENSOMYG00000055964 ENSOMYG00000000693 ENSOMYG00000051664 ENSOMYG00000000685 ENSOMYG00000068065 ENSOMYG00000039580 ENSOMYG00000070137 Oncorhynchus_a ANCESTRAL SPECIES 157 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b.e ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.b.a ENSGT00940000166587.a ENSGT00940000166587.b.a ENSGT00940000155337.ab ENSGT01010000225286 ENSGT00940000157081 ENSGT00940000155080 ENSGT00390000002581 ENSGT00940000157260.t.s.a ENSGT00390000006486.f ENSGT00940000159791.t.a.a ENSGT00940000159308.kb ENSGT00940000157935.b ENSGT00940000157565 ENSGT00830000128447.q.a Coho salmon DUPLICATION Coho salmon MODERN SPECIES 33 papolg (ENSOKIG00005039901) ENSOKIG00005039783 ENSOKIG00005039740 REL (ENSOKIG00005039724) pex13 (ENSOKIG00005039709) SANBR (ENSOKIG00005039657) ENSOKIG00005039218 ENSOKIG00005039174 ENSOKIG00005039168 ENSOKIG00005039155 b3gnt2b (ENSOKIG00005039138) ENSOKIG00005046392 otx1 (ENSOKIG00005046385) ENSOKIG00005046266 MDH1 (ENSOKIG00005045989) UGP2 (ENSOKIG00005045840) ##22 ENSOKIG00005045806 ENSOKIG00005045728 ENSOKIG00005045719 ENSOKIG00005045645 ENSOKIG00005045554 LGALSL (ENSOKIG00005045534) ENSOKIG00005045528 ENSOKIG00005045522 ENSOKIG00005045511 SLC1A4 (ENSOKIG00005045486) ENSOKIG00005045441 ENSOKIG00005045435 ENSOKIG00005045428 ENSOKIG00005045420 zgc:171579 (ENSOKIG00005045417) Coho salmon MODERN SPECIES 1370 ENSOKIG00005043408 UGP2 (ENSOKIG00005042891) ##22 ENSOKIG00005042719 ENSOKIG00005042653 ENSOKIG00005042461 ENSOKIG00005042293 Salmoninae ANCESTRAL SPECIES ENSGT00940000153464.B.z.b.f ##22 Huchen MODERN SPECIES 11555 ENSHHUG00000017033 ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000153464.B.z.b.f ##22 Salmo ANCESTRAL SPECIES ENSGT00940000153464.B.z.b.f ##22 Atlantic salmon MODERN SPECIES 9 ENSSSAG00000045165 fbxl15 (ENSSSAG00000047107) ENSSSAG00000095639 ENSSSAG00000082764 ENSSSAG00000111130 ENSSSAG00000108190 ENSSSAG00000047170 ENSSSAG00000120034 ENSSSAG00000115973 ENSSSAG00000105564 ENSSSAG00000095880 EHBP1 (ENSSSAG00000104856) otx1 (ENSSSAG00000046288) WDPCP (ENSSSAG00000093750) MDH1 (ENSSSAG00000006715) ugp2b (ENSSSAG00000005073) ##22 ENSSSAG00000088174 peli1b (ENSSSAG00000001262) ENSSSAG00000102558 ENSSSAG00000097707 LGALSL (ENSSSAG00000109899) ENSSSAG00000107119 ENSSSAG00000111604 ENSSSAG00000010503 ENSSSAG00000097775 ENSSSAG00000001194 ENSSSAG00000000170 ENSSSAG00000089199 ENSSSAG00000109900 zgc:171579 (ENSSSAG00000102963) ENSSSAG00000107265 River trout MODERN SPECIES 35 ENSSTUG00000016864 papolg (ENSSTUG00000017319) ENSSTUG00000021761 ENSSTUG00000021771 pex13 (ENSSTUG00000021880) SANBR (ENSSTUG00000021904) XPO1 (ENSSTUG00000022024) ENSSTUG00000022278 ENSSTUG00000022286 b3gnt2b (ENSSTUG00000022297) otx1 (ENSSTUG00000022321) otx1 (ENSSTUG00000022333) ENSSTUG00000017983 ENSSTUG00000017988 MDH1 (ENSSTUG00000018007) ugp2b (ENSSTUG00000018287) ##22 ENSSTUG00000019710 peli1b (ENSSTUG00000019729) ENSSTUG00000019856 lgalslb (ENSSTUG00000020161) ENSSTUG00000020168 ENSSTUG00000020208 slc1a4 (ENSSTUG00000020308) ENSSTUG00000020382 ENSSTUG00000020427 zgc:171579 (ENSSTUG00000020488) ADGRB3 (ENSSTUG00000020495) lmbrd1 (ENSSTUG00000020610) ENSSTUG00000021172 ENSSTUG00000021177 ENSSTUG00000021183 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000153464.B.z.b.f ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000153464.B.z.b.f ##22 Chinook salmon MODERN SPECIES 1188 MDH1 (ENSOTSG00005016380) ugp2b (ENSOTSG00005023503) ##22 ENSOTSG00005023633 Northern pike MODERN SPECIES 4 ACTR2 (ENSELUG00000014576) papolg (ENSELUG00000014497) ENSELUG00000014470 ENSELUG00000001419 rel (ENSELUG00000014377) pex13 (ENSELUG00000014334) SANBR (ENSELUG00000014318) XPO1 (ENSELUG00000014306) b3gnt2b (ENSELUG00000014198) EHBP1 (ENSELUG00000014117) WDPCP (ENSELUG00000013884) otx1 (ENSELUG00000013906) ENSELUG00000030195 MDH1 (ENSELUG00000013840) ENSELUG00000032007 ugp2b (ENSELUG00000013792) ##22 ENSELUG00000029570 ENSELUG00000013758 peli1b (ENSELUG00000013744) ENSELUG00000013717 lgalslb (ENSELUG00000013610) ENSELUG00000034614 ENSELUG00000033665 ENSELUG00000034060 ENSELUG00000029673 ENSELUG00000013239 ENSELUG00000033366 ENSELUG00000025663 ENSELUG00000013017 ENSELUG00000028453 ENSELUG00000013000 Otomorpha ANCESTRAL SPECIES 10 ENSGT00940000157361.a ENSGT00940000158042 ENSGT00390000005537 ENSGT00940000156983.a.a.r ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.t ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.r ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00530000063867.b.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154556.c.b ENSGT00940000156841.b ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b ENSGT00390000018052 Otophysi ANCESTRAL SPECIES 229 ENSGT00940000155068.a.b ENSGT00940000161152 ENSGT01030000234606.a.a.a.b ENSGT00700000104522 ENSGT00940000157593 ENSGT00390000017746 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.t.d.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 Characiphysae ANCESTRAL SPECIES 54 ENSGT00940000155068.a.b ENSGT00940000161152 ENSGT01030000234606.a.a.a.b ENSGT00700000104522 ENSGT00940000157593 ENSGT00390000017746 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.t.d.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000174754 ENSGT00940000154186.a.q.g ENSGT00940000177700 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a ENSGT00940000160793 ENSGT00940000155109.a.a ENSGT00940000156276 ENSGT00390000014563.a.a.b ENSGT00940000156416.d ENSGT01010000222287.B.b.a.b.a ENSGT00390000010799 Channel catfish MODERN SPECIES 28 vax1 (ENSIPUG00000012584) ENSIPUG00000012593 ENSIPUG00000012617 ENSIPUG00000012647 kcnk18 (ENSIPUG00000012673) slc18a2 (ENSIPUG00000012691) pdzd8 (ENSIPUG00000012766) pex13 (ENSIPUG00000012783) kiaa1841 (ENSIPUG00000012801) Xpo1 (ENSIPUG00000012891) b3gnt2b (ENSIPUG00000013024) EHBP1 (ENSIPUG00000013044) otx1 (ENSIPUG00000013113) WDPCP (ENSIPUG00000013126) MDH1 (ENSIPUG00000013164) UGP2 (ENSIPUG00000013211) ##22 peli1b (ENSIPUG00000013383) abcG20 (ENSIPUG00000013458) ENSIPUG00000013628 ENSIPUG00000013655 pygb (ENSIPUG00000013662) ENSIPUG00000013756 ENTPD6 (ENSIPUG00000013815) vsx1 (ENSIPUG00000013858) ENSIPUG00000013889 ube2d1a (ENSIPUG00000013898) ENSIPUG00000013942 ENSIPUG00000013947 phyhipla (ENSIPUG00000013956) ENSIPUG00000013975 slc16a9a (ENSIPUG00000014014) Characiphysae_b ANCESTRAL SPECIES 53 ENSGT00940000161152 ENSGT01030000234606.a.a.a.b ENSGT00940000165789 ENSGT00700000104522 ENSGT00940000157593 ENSGT00390000017746 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.t.d.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000154186.a.q.g.a ENSGT00940000177700 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a ENSGT00940000160793 ENSGT00940000155109.a.a ENSGT00940000156276 ENSGT00390000014563.a.a.b ENSGT00940000156416.d ENSGT01010000222287.B.b.a.b.a ENSGT00390000010799 ENSGT00940000165091.d.c Characoidei ANCESTRAL SPECIES 149 ENSGT00940000165789 ENSGT01030000234606.a.a.a.b ENSGT00940000161152 ENSGT00940000155068.a.b ENSGT00510000048167.a ENSGT00950000182805.a.b ENSGT00940000154551.b.s ENSGT00940000166409 ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000154186.a.q.g.a ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a ENSGT00940000157776.d ENSGT00940000160793 ENSGT00940000155109.a.a ENSGT00940000156276 ENSGT00390000014563.a.a.b ENSGT00940000156416.d ENSGT01010000222287.B.b.a.b.a ENSGT00390000010799 ENSGT00940000165091.d.c Red-bellied piranha MODERN SPECIES 105 ENSPNAG00000024902 ENSPNAG00000025100 vax1 (ENSPNAG00000025156) atp6v1ba (ENSPNAG00000025256) shtn1 (ENSPNAG00000025377) hspa12a (ENSPNAG00000025546) abhd12 (ENSPNAG00000025576) ENSPNAG00000025594 b3gnt2b (ENSPNAG00000025601) EHBP1 (ENSPNAG00000025894) otx1 (ENSPNAG00000025936) WDPCP (ENSPNAG00000025965) MDH1 (ENSPNAG00000006004) ugp2b (ENSPNAG00000026069) ##22 peli1b (ENSPNAG00000005864) ENSPNAG00000026253 ENSPNAG00000004038 ENSPNAG00000026287 ENSPNAG00000026303 ENSPNAG00000026332 pygb (ENSPNAG00000006316) ENSPNAG00000026487 entpd6 (ENSPNAG00000026516) ENSPNAG00000026538 vsx1 (ENSPNAG00000005509) ube2d1a (ENSPNAG00000004925) BICC1 (ENSPNAG00000026738) phyhipla (ENSPNAG00000007149) ENSPNAG00000026778 Mexicana tetra MODERN SPECIES 24 ENSAMXG00000011676 vax1 (ENSAMXG00000036022) ENSAMXG00000035820 atp6v1ba (ENSAMXG00000011653) shtn1 (ENSAMXG00000011638) eno4 (ENSAMXG00000011630) hspa12a (ENSAMXG00000011627) abhd12 (ENSAMXG00000043906) ENSAMXG00000029062 b3gnt2b (ENSAMXG00000025419) ENSAMXG00000037682 ENSAMXG00000029465 otx1 (ENSAMXG00000011543) ENSAMXG00000043843 mdh1aa (ENSAMXG00000040846) ugp2b (ENSAMXG00000011506) ##22 peli1b (ENSAMXG00000011500) ENSAMXG00000031371 ENSAMXG00000030790 pygb (ENSAMXG00000011468) ENSAMXG00000011458 entpd6 (ENSAMXG00000042365) ENSAMXG00000011442 ube2d1a (ENSAMXG00000036160) BICC1 (ENSAMXG00000011396) phyhipla (ENSAMXG00000042049) ENSAMXG00000039779 ENSAMXG00000036384 slc16a9a (ENSAMXG00000037633) ccdc6a (ENSAMXG00000039127) ENSAMXG00000025418 Electric eel MODERN SPECIES 291 PDZD8 (ENSEEEG00000004979) pex13 (ENSEEEG00000004983) SANBR (ENSEEEG00000005004) XPO1 (ENSEEEG00000005037) b3gnt2b (ENSEEEG00000005098) EHBP1 (ENSEEEG00000005099) ENSEEEG00000005100 otx1 (ENSEEEG00000005101) ENSEEEG00000005103 MDH1 (ENSEEEG00000005124) ugp2b (ENSEEEG00000005505) ##22 peli1b (ENSEEEG00000005670) ENSEEEG00000005673 ENSEEEG00000005675 ENSEEEG00000005676 pygb (ENSEEEG00000005688) ENSEEEG00000005749 entpd6 (ENSEEEG00000005751) vsx1 (ENSEEEG00000005752) ENSEEEG00000005754 ube2d1a (ENSEEEG00000005771) Cyprinoidei ANCESTRAL SPECIES 76 ENSGT00390000009613.a ENSGT00390000018409.h ENSGT00940000158306 ENSGT00700000104522 ENSGT00940000157593 ENSGT00390000017746 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.t.d.a ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.r ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000174754 ENSGT00940000154186.a.q ENSGT00950000183034.B ENSGT00940000154531 ENSGT00390000002053 ENSGT00940000165091.d.c ENSGT00390000010799 ENSGT00390000006218 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 351 ENSGT00530000063410.a.r.c.b ENSGT00940000153464.B.z.b.g ##22 ENSGT00950000183050.b.b.b.a.a.a.a.a ENSGT00940000166587.c ENSGT00940000154186.a.q.f ENSGT00950000183034.B.n ENSGT00940000154531.vc.b ENSGT00390000002053.d ENSGT00940000165091.d.c.a ENSGT00390000010799.k ENSGT00390000006218.i ENSGT00530000063557.b.k ENSGT00940000155483.f.nb.a.a ENSGT00940000163420.e ENSGT00390000006619 ENSGT00390000004173 ENSGT00940000164027.c Goldfish MODERN SPECIES 8 ENSCARG00000068610 zgc:194392 (ENSCARG00000068642) APOB (ENSCARG00000068678) ldah (ENSCARG00000068798) GDF7 (ENSCARG00000068808) tpp1 (ENSCARG00000068849) yy1a (ENSCARG00000069043) degs2 (ENSCARG00000069051) ENSCARG00000069059 eml1 (ENSCARG00000069101) ENSCARG00000069212 ENSCARG00000069218 otx1 (ENSCARG00000069219) WDPCP (ENSCARG00000069226) mdh1ab (ENSCARG00000069245) ugp2b (ENSCARG00000069287) ##22 peli1b (ENSCARG00000019169) ENSCARG00000019178 ENSCARG00000019214 ENSCARG00000019222 ENSCARG00000019232 DYNLT1 (ENSCARG00000019246) zmpste24 (ENSCARG00000019269) atp5if1b (ENSCARG00000019283) rpl13a (ENSCARG00000019293) commd9 (ENSCARG00000019311) ENSCARG00000019318 ENSCARG00000019480 ENSCARG00000024116 ENSCARG00000024126 znf593 (ENSCARG00000024136) Cyprininae_a ANCESTRAL SPECIES 35 ENSGT00390000018409.h.d ENSGT00940000158306.v.a ENSGT00700000104522 ENSGT00940000157593.a ENSGT00390000017746.g ENSGT00390000016883.k ENSGT00390000008178.l ENSGT00940000153408.B.t.d.a.b ENSGT00940000157824.i.b ENSGT00940000155345.q.c ENSGT00940000157597.e.a.b ENSGT00940000161234.a ENSGT00390000016551.j.b ENSGT00390000016551.j.a ENSGT00530000063410.a.r.c.b ENSGT00940000153464.B.z.b.g ##22 ENSGT00950000183050.b.b.b.a.a.a.a.a ENSGT00940000166587.c ENSGT00940000154186.a.q.f ENSGT00950000183034.B.n ENSGT00390000002053.d ENSGT00940000165091.d.c.a ENSGT00390000010799.k ENSGT00390000006218.i ENSGT00530000063557.b.k ENSGT00940000155483.f.nb.a.a ENSGT00940000163420.e ENSGT00390000006619 ENSGT00390000004173 ENSGT00940000164027.c ENSGT00940000155187.A.a Common carp reference MODERN SPECIES 30 ptena (ENSCCRG00000040992) papss2a (ENSCCRG00000055982) sgms1a (ENSCCRG00000070887) kcnk18 (ENSCCRG00000013054) slc18a2 (ENSCCRG00000013071) PDZD8 (ENSCCRG00000013188) ENSCCRG00000057670 ENSCCRG00000055884 ENSCCRG00000003451 ENSCCRG00000003438 b3gnt2b (ENSCCRG00000053079) EHBP1 (ENSCCRG00000022494) otx1 (ENSCCRG00000067814) WDPCP (ENSCCRG00000024549) mdh1ab (ENSCCRG00000026888) ugp2b (ENSCCRG00000018829) ##22 peli1b (ENSCCRG00000018790) ENSCCRG00000018709 ENSCCRG00000049285 ENSCCRG00000058941 zmpste24 (ENSCCRG00000057683) atp5if1b (ENSCCRG00000049269) rpl13a (ENSCCRG00000031859) commd9 (ENSCCRG00000049251) ENSCCRG00000049249 ENSCCRG00000034639 znf593 (ENSCCRG00000064674) ENSCCRG00000076662 selenon (ENSCCRG00000034330) ENSCCRG00000058106 mtfr1l (ENSCCRG00000070238) Golden-line barbel MODERN SPECIES 53 papss2a (ENSSGRG00000004155) minpp1a (ENSSGRG00000008060) sgms1a (ENSSGRG00000008062) kcnk18 (ENSSGRG00000008063) slc18a2 (ENSSGRG00000008065) PDZD8 (ENSSGRG00000008067) pex13 (ENSSGRG00000008068) SANBR (ENSSGRG00000008070) XPO1 (ENSSGRG00000008167) ENSSGRG00000009075 b3gnt2b (ENSSGRG00000009076) EHBP1 (ENSSGRG00000009079) otx1 (ENSSGRG00000009093) ENSSGRG00000009096 mdh1ab (ENSSGRG00000009100) ugp2b (ENSSGRG00000009223) ##22 peli1b (ENSSGRG00000009965) ENSSGRG00000009966 ENSSGRG00000009968 RLF (ENSSGRG00000009969) DYNLT1 (ENSSGRG00000010041) atp5if1b (ENSSGRG00000010042) rpl13a (ENSSGRG00000010044) commd9 (ENSSGRG00000010076) ENSSGRG00000010077 MAP4K3 (ENSSGRG00000010116) ENSSGRG00000013570 morn2 (ENSSGRG00000013571) znf593 (ENSSGRG00000013572) selenon (ENSSGRG00000013573) ENSSGRG00000013575 Cyprininae ANCESTRAL SPECIES 40 ENSGT00390000018409.h.d ENSGT00940000158306.v.a ENSGT00700000104522 ENSGT00940000157593.a ENSGT00390000017746.g ENSGT00390000016883.k ENSGT00390000008178.l ENSGT00940000153408.B.t.d.a.b ENSGT00940000157824.i.b ENSGT00940000155345.q.c ENSGT00940000157597.e.a.b ENSGT00940000161234.a ENSGT00390000016551.j.b ENSGT00390000016551.j.a ENSGT00530000063410.a.r.c.a ENSGT00940000153464.B.z.b.h ##22 ENSGT00950000183050.b.b.b.a.a.a.a.b ENSGT00940000166587.d ENSGT00940000154186.a.q.e ENSGT00950000183034.B.m ENSGT00390000002053.c ENSGT00940000165091.d.c.b ENSGT00390000010799.l ENSGT00390000006218.j ENSGT00530000063557.b.l ENSGT00940000155483.f.nb.a.b ENSGT00940000163420.f ENSGT00940000175997 ENSGT00940000164027.d ENSGT00940000155187.A.b ENSGT00950000183215.c.b.j Goldfish DUPLICATION Goldfish MODERN SPECIES 2787 mdh1ab (ENSCARG00000063220) ugp2b (ENSCARG00000061651) ##22 Goldfish MODERN SPECIES 2567 WDPCP (ENSCARG00000042289) mdh1ab (ENSCARG00000042343) ugp2b (ENSCARG00000042727) ##22 peli1b (ENSCARG00000042998) ENSCARG00000043022 ENSCARG00000043167 RLF (ENSCARG00000043237) zmpste24 (ENSCARG00000043291) atp5if1b (ENSCARG00000043525) rpl13a (ENSCARG00000043559) ENSCARG00000044146 ENSCARG00000050808 ENSCARG00000050825 ENSCARG00000050842 mtfr1l (ENSCARG00000050893) STAC (ENSCARG00000050918) spdya (ENSCARG00000050938) wdr43 (ENSCARG00000050962) Cyprininae_a ANCESTRAL SPECIES 58 ENSGT00530000063410.a.r.c.a ENSGT00940000153464.B.z.b.h ##22 ENSGT00950000183050.b.b.b.a.a.a.a.b ENSGT00940000166587.d ENSGT00940000154186.a.q.e ENSGT00950000183034.B.m ENSGT00940000154531.vc.b ENSGT00390000002053.c ENSGT00390000010799.l ENSGT00390000006218.j ENSGT00530000063557.b.l ENSGT00940000155483.f.nb.a.b ENSGT00940000163420.f ENSGT00940000175997 ENSGT00940000164027.d ENSGT00940000155187.A.b ENSGT00940000181185 Common carp reference MODERN SPECIES 4 minpp1a (ENSCCRG00000027401) sgms1a (ENSCCRG00000027300) ENSCCRG00000080142 slc18a2 (ENSCCRG00000027262) ENSCCRG00000027247 pex13 (ENSCCRG00000003017) ENSCCRG00000002941 ENSCCRG00000003107 ENSCCRG00000073128 b3gnt2b (ENSCCRG00000082775) ENSCCRG00000061352 EHBP1 (ENSCCRG00000072862) ENSCCRG00000073238 otx1 (ENSCCRG00000063935) mdh1ab (ENSCCRG00000056932) ugp2b (ENSCCRG00000024567) ##22 peli1b (ENSCCRG00000024542) ENSCCRG00000013690 ENSCCRG00000013697 ENSCCRG00000058947 zmpste24 (ENSCCRG00000065255) ENSCCRG00000034282 rpl13a (ENSCCRG00000034266) commd9 (ENSCCRG00000034261) ENSCCRG00000034259 ENSCCRG00000033647 ENSCCRG00000033627 ENSCCRG00000034354 selenon (ENSCCRG00000006950) ENSCCRG00000065602 ENSCCRG00000049661 Golden-line barbel MODERN SPECIES 3 ENSSGRG00000030693 ugp2b (ENSSGRG00000029976) ##22 peli1b (ENSSGRG00000029972) ENSSGRG00000029971 ENSSGRG00000029970 ENSSGRG00000029969 ENSSGRG00000029967 ENSSGRG00000029966 zmpste24 (ENSSGRG00000029872) commd9 (ENSSGRG00000029871) ENSSGRG00000029869 ENSSGRG00000029868 ENSSGRG00000029867 ENSSGRG00000029862 mtfr1l (ENSSGRG00000029861) spdya (ENSSGRG00000029858) trmt61b (ENSSGRG00000029857) Zebrafish MODERN SPECIES 8 minpp1a (ENSDARG00000057058) sgms1a (ENSDARG00000057053) kcnk18 (ENSDARG00000057049) slc18a2 (ENSDARG00000015110) PDZD8 (ENSDARG00000088699) pex13 (ENSDARG00000071037) SANBR (ENSDARG00000079857) XPO1 (ENSDARG00000063229) ENSDARG00000097418 ENSDARG00000086305 b3gnt2b (ENSDARG00000091902) EHBP1 (ENSDARG00000043643) otx1 (ENSDARG00000094992) WDPCP (ENSDARG00000074590) mdh1ab (ENSDARG00000103849) ugp2b (ENSDARG00000008200) ##22 peli1b (ENSDARG00000044083) ENSDARG00000071341 ENSDARG00000071347 ENSDARG00000116881 ENSDARG00000063553 DYNLT1 (ENSDARG00000094627) zmpste24 (ENSDARG00000044090) atp5if1b (ENSDARG00000044092) rpl13a (ENSDARG00000044093) commd9 (ENSDARG00000094258) ENSDARG00000093070 MAP4K3 (ENSDARG00000071357) ENSDARG00000097964 morn2 (ENSDARG00000071360) znf593 (ENSDARG00000044102) Clupeiformes ANCESTRAL SPECIES 8 ENSGT00940000160412.b ENSGT00940000158042 ENSGT00390000005537 ENSGT00940000156983.a.a.r ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.t ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.r ENSGT00940000153464.B.z.b ##22 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000154186.a.q ENSGT00940000155337.ab ENSGT00530000063867.b.b ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000154556.c.b ENSGT00940000156841.b ENSGT00940000156327.l ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000183091.A.b.n ENSGT00390000018052 ENSGT00950000183091.A.b.m Atlantic herring MODERN SPECIES 4 bcl11aa (ENSCHAG00000009178) papolg (ENSCHAG00000003904) rel (ENSCHAG00000003607) pex13 (ENSCHAG00000003593) SANBR (ENSCHAG00000003275) XPO1 (ENSCHAG00000002294) ENSCHAG00000002206 b3gnt2b (ENSCHAG00000002175) b3gnt2b (ENSCHAG00000002172) EHBP1 (ENSCHAG00000001812) otx1 (ENSCHAG00000001784) WDPCP (ENSCHAG00000001434) mdh1ab (ENSCHAG00000000940) ENSCHAG00000000462 ENSCHAG00000019202 ugp2b (ENSCHAG00000018928) ##22 peli1b (ENSCHAG00000018837) ENSCHAG00000018691 ENSCHAG00000018667 ENSCHAG00000018678 lgalslb (ENSCHAG00000018658) sertad2b (ENSCHAG00000018647) slc1a4 (ENSCHAG00000018548) c1d (ENSCHAG00000018513) dnaaf10 (ENSCHAG00000018360) pno1 (ENSCHAG00000018350) spred2b (ENSCHAG00000018338) meis1b (ENSCHAG00000017672) ENSCHAG00000017647 plek (ENSCHAG00000017624) ENSCHAG00000017294 Denticle herring MODERN SPECIES 18 ENSDCDG00000022243 ENSDCDG00000022240 bcl11aa (ENSDCDG00000022234) papolg (ENSDCDG00000016269) rel (ENSDCDG00000016031) pex13 (ENSDCDG00000016023) SANBR (ENSDCDG00000015943) XPO1 (ENSDCDG00000015851) ENSDCDG00000015816 b3gnt2b (ENSDCDG00000015811) EHBP1 (ENSDCDG00000015700) otx1 (ENSDCDG00000015687) WDPCP (ENSDCDG00000015075) mdh1ab (ENSDCDG00000015055) ENSDCDG00000015051 ugp2b (ENSDCDG00000014366) ##22 peli1b (ENSDCDG00000014302) ENSDCDG00000014232 ENSDCDG00000014166 ENSDCDG00000014146 lgalslb (ENSDCDG00000014126) sertad2b (ENSDCDG00000014115) slc1a4 (ENSDCDG00000013999) cep68 (ENSDCDG00000032975) rab1ab (ENSDCDG00000032925) zgc:153169 (ENSDCDG00000032906) actr2b (ENSDCDG00000032825) spred2b (ENSDCDG00000032821) meis1a (ENSDCDG00000032751) ENSDCDG00000032730 c1d (ENSDCDG00000032727) Yeast DUPLICATION Yeast MODERN SPECIES 11 YKL050C CSE4 (YKL049C) ELM1 (YKL048C) ANR2 (YKL047W) DCW1 (YKL046C) PRI2 (YKL045W) MMO1 (YKL044W) PHD1 (YKL043W) SPC42 (YKL042W) VPS24 (YKL041W) NFU1 (YKL040C) PTM1 (YKL039W) RGT1 (YKL038W) AIM26 (YKL037W) YKL036C UGP1 (YKL035W) ##22 TUL1 (YKL034W) YKL033W-A TTI1 (YKL033W) IXR1 (YKL032C) YKL031W YKL030W MAE1 (YKL029C) TFA1 (YKL028W) TCD2 (YKL027W) GPX1 (YKL026C) PAN3 (YKL025C) URA6 (YKL024C) YKL023C-A YKL023W CDC16 (YKL022C) Yeast MODERN SPECIES 9 SNF6 (YHL025W) RIM4 (YHL024W) NPR3 (YHL023C) SPO11 (YHL022C) AIM17 (YHL021C) OPI1 (YHL020C) YHL019W-A APM2 (YHL019C) YHL018W YHL017W DUR3 (YHL016C) YHL015W-A RPS20 (YHL015W) YLF2 (YHL014C) OTU2 (YHL013C) YHL012W ##22 PRS3 (YHL011C) ETP1 (YHL010C) YAP3 (YHL009C) YHL008C STE20 (YHL007C) YHL006W-A SHU1 (YHL006C) YHL005C MRP4 (YHL004W) LAG1 (YHL003C) YHL002C-A HSE1 (YHL002W) RPL14B (YHL001W) OSH7 (YHR001W) QCR10 (YHR001W-A)