Amniota	ANCESTRAL SPECIES		ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000164372	ENSGT00940000164592	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35
Mammalia	ANCESTRAL SPECIES		ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000164372	ENSGT00940000164592	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35
Theria	ANCESTRAL SPECIES	1	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Eutheria	ANCESTRAL SPECIES	17	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Glires	ANCESTRAL SPECIES	22	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00940000165049
Rodentia	ANCESTRAL SPECIES	22	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00940000165049
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35
Myomorpha	ANCESTRAL SPECIES	46	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35
Lesser Egyptian jerboa	MODERN SPECIES	73	Tex26 (ENSJJAG00000007098) #7	Medag (ENSJJAG00000017396) #8	Alox5ap (ENSJJAG00000004614) #9	ENSJJAG00000014544 #10	ENSJJAG00000000696 #11	Katnal1 (ENSJJAG00000011429) #12	Ubl3 (ENSJJAG00000016514) #13	Slc7a1 (ENSJJAG00000022034) #14	ENSJJAG00000008307 #15	Slc46a3 (ENSJJAG00000015117) #16	Pomp (ENSJJAG00000014017) #17	Flt1 (ENSJJAG00000009276) #18	Pan3 (ENSJJAG00000013560) #19	Flt3 (ENSJJAG00000004796) #20	Urad (ENSJJAG00000022682) #21	Cdx2 (ENSJJAG00000010229) #22	Pdx1 (ENSJJAG00000017468) #23	Gsx1 (ENSJJAG00000021574) #24	ENSJJAG00000009076 #25	ENSJJAG00000022671 #26	Lnx2 (ENSJJAG00000014998) #27	Mtif3 (ENSJJAG00000013006) #28	Gtf3a (ENSJJAG00000011501) #29	Rasl11a (ENSJJAG00000020910) #30	Usp12 (ENSJJAG00000019341) #31	Gpr12 (ENSJJAG00000012507) #32	Wasf3 (ENSJJAG00000018294) #33	Cdk8 (ENSJJAG00000009532) #34	Rnf6 (ENSJJAG00000023994) #35	Vstm2b (ENSJJAG00000022517) #36	Pop4 (ENSJJAG00000013376) #37
Muroidea	ANCESTRAL SPECIES	68	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35
Muroidea_A	ANCESTRAL SPECIES	27	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.d	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00950000182958.a.b.b.j.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.a.b
Cricetidae	ANCESTRAL SPECIES	27	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.d	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j.a #35	ENSGT00950000182958.a.b.b.j.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.a.b
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.d	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j.a #35	ENSGT00950000182958.a.b.b.j.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.a.b.a
Golden Hamster	MODERN SPECIES	762	Medag (ENSMAUG00000009604) #8	Alox5ap (ENSMAUG00000012262) #9	ENSMAUG00000013736 #10	ENSMAUG00000017646	Katnal1 (ENSMAUG00000007731) #12	Ubl3 (ENSMAUG00000016399) #13	Slc7a1 (ENSMAUG00000000359) #14	ENSMAUG00000018323 #15	ENSMAUG00000020285	Pomp (ENSMAUG00000006509) #17	Flt1 (ENSMAUG00000006859) #18	Pan3 (ENSMAUG00000021155) #19	Flt3 (ENSMAUG00000011952) #20	ENSMAUG00000001106	Urad (ENSMAUG00000019946) #21	Cdx2 (ENSMAUG00000020822) #22	Pdx1 (ENSMAUG00000021082) #23	Polr1d (ENSMAUG00000001946) #26	Lnx2 (ENSMAUG00000009457) #27	Mtif3 (ENSMAUG00000011167) #28	Gtf3a (ENSMAUG00000016253) #29	Rasl11a (ENSMAUG00000019356) #30	ENSMAUG00000006957	Usp12 (ENSMAUG00000010310) #31	ENSMAUG00000010877	Gpr12 (ENSMAUG00000015064) #32	Rfc3 (ENSMAUG00000016464)
Chinese hamster chok1gshd	MODERN SPECIES	130	ENSCGRG00001025063	Alox5ap (ENSCGRG00001018470) #9	ENSCGRG00001018342 #10	Katnal1 (ENSCGRG00001024027) #12	Ubl3 (ENSCGRG00001002093) #13	Slc7a1 (ENSCGRG00001019393) #14	Mtus2 (ENSCGRG00001023648) #15	ENSCGRG00001001206	Slc46a3 (ENSCGRG00001023870) #16	Pomp (ENSCGRG00001000803) #17	Flt1 (ENSCGRG00001000764) #18	Pan3 (ENSCGRG00001024986) #19	ENSCGRG00001012489	Flt3 (ENSCGRG00001010328) #20	Urad (ENSCGRG00001021146) #21	Cdx2 (ENSCGRG00001024259) #22	Pdx1 (ENSCGRG00001024891) #23	Gsx1 (ENSCGRG00001017641) #24	Polr1d (ENSCGRG00001021251) #26	Lnx2 (ENSCGRG00001022751) #27	ENSCGRG00001024532	Mtif3 (ENSCGRG00001024612) #28	Gtf3a (ENSCGRG00001024969) #29	Rasl11a (ENSCGRG00001014752) #30	Rpl21 (ENSCGRG00001007602)	ENSCGRG00001021742 #31	Gpr12 (ENSCGRG00001003285) #32	Wasf3 (ENSCGRG00001003303) #33	Cdk8 (ENSCGRG00001010747) #34	Rnf6 (ENSCGRG00001010459) #35	ENSCGRG00001020483
Cricetidae_B	ANCESTRAL SPECIES	49	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.d	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j.a #35	ENSGT00940000162113	ENSGT00950000182958.a.b.b.j.a.a.a.b
Prairie vole	MODERN SPECIES	7	Medag (ENSMOCG00000012447) #8	Alox5ap (ENSMOCG00000018258) #9	ENSMOCG00000018612 #10	ENSMOCG00000018161 ##11	Katnal1 (ENSMOCG00000013914) #12	Ubl3 (ENSMOCG00000012896) #13	Slc7a1 (ENSMOCG00000022298) #14	Mtus2 (ENSMOCG00000013900) #15	Slc46a3 (ENSMOCG00000007090) #16	Pomp (ENSMOCG00000006131) #17	ENSMOCG00000000648	Flt1 (ENSMOCG00000019790) #18	Pan3 (ENSMOCG00000001443) #19	Flt3 (ENSMOCG00000015945) #20	Urad (ENSMOCG00000018154) #21	Cdx2 (ENSMOCG00000010222) #22	Pdx1 (ENSMOCG00000007886) #23	Gsx1 (ENSMOCG00000002374) #24	Polr1d (ENSMOCG00000021288) #26	Lnx2 (ENSMOCG00000022088) #27	Mtif3 (ENSMOCG00000017226) #28	Gtf3a (ENSMOCG00000004408) #29	ENSMOCG00000017124	Rasl11a (ENSMOCG00000000626) #30	Rpl21 (ENSMOCG00000003487)	Usp12 (ENSMOCG00000001714) #31	Gpr12 (ENSMOCG00000009890) #32	ENSMOCG00000017944	Rnf6 (ENSMOCG00000006180) #35	ENSMOCG00000021837 #34	ENSMOCG00000014918
Northern American deer mouse	MODERN SPECIES	15	Medag (ENSPEMG00000000331) #8	Alox5ap (ENSPEMG00000000576) #9	Uspl1 (ENSPEMG00000003660) #10	ENSPEMG00000000834 #11	Katnal1 (ENSPEMG00000009164) #12	Ubl3 (ENSPEMG00000010779) #13	Slc7a1 (ENSPEMG00000006808) #14	Mtus2 (ENSPEMG00000011863) #15	ENSPEMG00000024696	Slc46a3 (ENSPEMG00000014019) #16	ENSPEMG00000014341 #17	Flt1 (ENSPEMG00000019000) #18	Pan3 (ENSPEMG00000008992) #19	Flt3 (ENSPEMG00000012278) #20	Urad (ENSPEMG00000025423) #21	Cdx2 (ENSPEMG00000000632) #22	Pdx1 (ENSPEMG00000001176) #23	Gsx1 (ENSPEMG00000004992) #24	Polr1d (ENSPEMG00000006336) #26	Lnx2 (ENSPEMG00000008280) #27	Mtif3 (ENSPEMG00000000930) #28	Gtf3a (ENSPEMG00000003201) #29	Rasl11a (ENSPEMG00000004475) #30	Rpl21 (ENSPEMG00000006041)	Usp12 (ENSPEMG00000008193) #31	Gpr12 (ENSPEMG00000010665) #32	ENSPEMG00000030961	Wasf3 (ENSPEMG00000011510) #33	Cdk8 (ENSPEMG00000012706) #34	ENSPEMG00000015454 #35	ENSPEMG00000027927
Murinae	ANCESTRAL SPECIES	28	ENSGT00390000018451 #8	ENSGT00960000191336	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00950000182958.a.b.b.j.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.a.b
Mus	ANCESTRAL SPECIES	17	ENSGT00390000018451 #8	ENSGT00960000191336	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00950000182958.a.b.b.j.a.a.a.a.c	ENSGT00950000182958.a.b.b.j.a.a.a.b
Mus_A	ANCESTRAL SPECIES	6	ENSGT00390000018451 #8	ENSGT00960000191336	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00950000182958.a.b.b.j.a.a.a.a.c	ENSGT00950000182958.a.b.b.j.a.a.a.b
Mus_B	ANCESTRAL SPECIES	4	ENSGT00390000018451 #8	ENSGT00960000191336	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00950000182958.a.b.b.j.a.a.a.a.c.a.a	ENSGT00950000182958.a.b.b.j.a.a.a.b.i.b
Mouse	MODERN SPECIES	14	Tex26 (ENSMUSG00000029660) #7	Medag (ENSMUSG00000029659) #8	Alox5ap (ENSMUSG00000060063) #9	Uspl1 (ENSMUSG00000041264) #10	Hmgb1 (ENSMUSG00000066551) ##11	Katnal1 (ENSMUSG00000041298) #12	Ubl3 (ENSMUSG00000001687) #13	Slc7a1 (ENSMUSG00000041313) #14	Mtus2 (ENSMUSG00000029651) #15	Slc46a3 (ENSMUSG00000029650) #16	Pomp (ENSMUSG00000029649) #17	Flt1 (ENSMUSG00000029648) #18	Pan3 (ENSMUSG00000029647) #19	Flt3 (ENSMUSG00000042817) #20	Urad (ENSMUSG00000075543) #21	Cdx2 (ENSMUSG00000029646) #22	Pdx1 (ENSMUSG00000029644) #23	Gsx1 (ENSMUSG00000053129) #24	Polr1d (ENSMUSG00000029642) #26	Lnx2 (ENSMUSG00000016520) #27	Mtif3 (ENSMUSG00000016510) #28	Gtf3a (ENSMUSG00000016503) #29	Rasl11a (ENSMUSG00000029641) #30	Rpl21 (ENSMUSG00000041453)	Usp12 (ENSMUSG00000029640) #31	Gpr12 (ENSMUSG00000041468) #32	Gm3415 (ENSMUSG00000095557)	Gm3409 (ENSMUSG00000096664)	Gm3404 (ENSMUSG00000079091)	Gm3402 (ENSMUSG00000041505)	4930449I24Rik (ENSMUSG00000079093)
Mus_C	ANCESTRAL SPECIES	4	ENSGT00390000018451 #8	ENSGT00960000191336	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00940000155423.e.b	ENSGT00940000162113
Steppe mouse	MODERN SPECIES	3364	Alox5ap (ENSMSIG00000023243) #9	Uspl1 (ENSMSIG00000023285) #10	ENSMSIG00000023332 ##11	Katnal1 (ENSMSIG00000023377) #12	Ubl3 (ENSMSIG00000023402) #13	Slc7a1 (ENSMSIG00000023421) #14	Mtus2 (ENSMSIG00000023484) #15	Slc46a3 (ENSMSIG00000023578) #16	Pomp (ENSMSIG00000023598) #17	ENSMSIG00000023628	Flt1 (ENSMSIG00000023642) #18	Pan3 (ENSMSIG00000023687) #19	Flt3 (ENSMSIG00000023851) #20	ENSMSIG00000023930	ENSMSIG00000023941	Cdx2 (ENSMSIG00000023947) #22	Pdx1 (ENSMSIG00000023956) #23	Gsx1 (ENSMSIG00000023969) #24	ENSMSIG00000023978 #26	Lnx2 (ENSMSIG00000023999) #27	Mtif3 (ENSMSIG00000024005) #28	Gtf3a (ENSMSIG00000024026) #29	Rasl11a (ENSMSIG00000024039) #30	ENSMSIG00000024049	Usp12 (ENSMSIG00000024096) #31	ENSMSIG00000024119	Gpr12 (ENSMSIG00000024129) #32	Wasf3 (ENSMSIG00000024134) #33	Cdk8 (ENSMSIG00000024179) #34	Rnf6 (ENSMSIG00000024340) #35	ENSMSIG00000024355
spretus	MODERN SPECIES	14	Medag (MGP_SPRETEiJ_G0029050) #8	Alox5ap (MGP_SPRETEiJ_G0029049) #9	Uspl1 (MGP_SPRETEiJ_G0029048) #10	MGP_SPRETEiJ_G0029047 #11	MGP_SPRETEiJ_G0029046 #12	MGP_SPRETEiJ_G0029045 #12	Ubl3 (MGP_SPRETEiJ_G0029044) #13	Slc7a1 (MGP_SPRETEiJ_G0029043) #14	Mtus2 (MGP_SPRETEiJ_G0029042) #15	Slc46a3 (MGP_SPRETEiJ_G0029041) #16	Pomp (MGP_SPRETEiJ_G0029040) #17	Flt1 (MGP_SPRETEiJ_G0029039) #18	Pan3 (MGP_SPRETEiJ_G0029038) #19	Flt3 (MGP_SPRETEiJ_G0029037) #20	Urad (MGP_SPRETEiJ_G0029036) #21	Cdx2 (MGP_SPRETEiJ_G0029035) #22	Pdx1 (MGP_SPRETEiJ_G0029034) #23	Gsx1 (MGP_SPRETEiJ_G0029033) #24	Polr1d (MGP_SPRETEiJ_G0029032) #26	Lnx2 (MGP_SPRETEiJ_G0029031) #27	Mtif3 (MGP_SPRETEiJ_G0029030) #28	Gtf3a (MGP_SPRETEiJ_G0029029) #29	Rasl11a (MGP_SPRETEiJ_G0029028) #30	MGP_SPRETEiJ_G0029027	Usp12 (MGP_SPRETEiJ_G0029026) #31	Gpr12 (MGP_SPRETEiJ_G0029025) #32	Wasf3 (MGP_SPRETEiJ_G0029024) #33	Cdk8 (MGP_SPRETEiJ_G0029023) #34	Rnf6 (MGP_SPRETEiJ_G0029022) #35	MGP_SPRETEiJ_G0029021	MGP_SPRETEiJ_G0029020
Ryukyu mouse	MODERN SPECIES	14	Medag (MGP_CAROLIEiJ_G0028052) #8	MGP_CAROLIEiJ_G0028051 #9	Uspl1 (MGP_CAROLIEiJ_G0028050) #10	MGP_CAROLIEiJ_G0028049 #11	MGP_CAROLIEiJ_G0028048 #12	MGP_CAROLIEiJ_G0028047 #12	Ubl3 (MGP_CAROLIEiJ_G0028046) #13	Slc7a1 (MGP_CAROLIEiJ_G0028045) #14	Mtus2 (MGP_CAROLIEiJ_G0028044) #15	Slc46a3 (MGP_CAROLIEiJ_G0028043) #16	Pomp (MGP_CAROLIEiJ_G0028042) #17	Flt1 (MGP_CAROLIEiJ_G0028041) #18	Pan3 (MGP_CAROLIEiJ_G0028040) #19	Flt3 (MGP_CAROLIEiJ_G0028039) #20	Urad (MGP_CAROLIEiJ_G0028038) #21	Cdx2 (MGP_CAROLIEiJ_G0028037) #22	Pdx1 (MGP_CAROLIEiJ_G0028036) #23	Gsx1 (MGP_CAROLIEiJ_G0028035) #24	Polr1d (MGP_CAROLIEiJ_G0028034) #26	Lnx2 (MGP_CAROLIEiJ_G0028033) #27	Mtif3 (MGP_CAROLIEiJ_G0028032) #28	Gtf3a (MGP_CAROLIEiJ_G0028031) #29	Rasl11a (MGP_CAROLIEiJ_G0028030) #30	Rpl21 (MGP_CAROLIEiJ_G0028029)	Usp12 (MGP_CAROLIEiJ_G0028028) #31	Gpr12 (MGP_CAROLIEiJ_G0028027) #32	Wasf3 (MGP_CAROLIEiJ_G0028026) #33	Cdk8 (MGP_CAROLIEiJ_G0028025) #34	Rnf6 (MGP_CAROLIEiJ_G0028024) #35	MGP_CAROLIEiJ_G0028023	MGP_CAROLIEiJ_G0028021
Shrew mouse	MODERN SPECIES	15	Medag (MGP_PahariEiJ_G0024618) #8	Alox5ap (MGP_PahariEiJ_G0024617) #9	Uspl1 (MGP_PahariEiJ_G0024616) #10	MGP_PahariEiJ_G0024615 #11	MGP_PahariEiJ_G0024614 #12	MGP_PahariEiJ_G0024613 #12	Ubl3 (MGP_PahariEiJ_G0024612) #13	Slc7a1 (MGP_PahariEiJ_G0024611) #14	Mtus2 (MGP_PahariEiJ_G0024610) #15	Slc46a3 (MGP_PahariEiJ_G0024609) #16	MGP_PahariEiJ_G0024608	Flt1 (MGP_PahariEiJ_G0024607) #18	Pan3 (MGP_PahariEiJ_G0024606) #19	Flt3 (MGP_PahariEiJ_G0024605) #20	Urad (MGP_PahariEiJ_G0024604) #21	Cdx2 (MGP_PahariEiJ_G0024603) #22	Pdx1 (MGP_PahariEiJ_G0024602) #23	Gsx1 (MGP_PahariEiJ_G0024601) #24	Polr1d (MGP_PahariEiJ_G0024600) #26	Lnx2 (MGP_PahariEiJ_G0024599) #27	Mtif3 (MGP_PahariEiJ_G0024598) #28	Gtf3a (MGP_PahariEiJ_G0024597) #29	Rasl11a (MGP_PahariEiJ_G0024596) #30	MGP_PahariEiJ_G0024595	Usp12 (MGP_PahariEiJ_G0024594) #31	Gpr12 (MGP_PahariEiJ_G0024593) #32	Wasf3 (MGP_PahariEiJ_G0024592) #33	Cdk8 (MGP_PahariEiJ_G0024591) #34	Rnf6 (MGP_PahariEiJ_G0024590) #35	MGP_PahariEiJ_G0024588	MGP_PahariEiJ_G0024589
Rat	MODERN SPECIES	3	Medag (ENSRNOG00000000906) #8	AABR07035203.1 (ENSRNOG00000060198)	Alox5ap (ENSRNOG00000000907) #9	Uspl1 (ENSRNOG00000000909) #10	AABR07035218.1 (ENSRNOG00000029813) ##11	Rpl35a-ps6 (ENSRNOG00000069961)	Katnal1 (ENSRNOG00000047618) #12	Slc7a1 (ENSRNOG00000000924) #14	Mtus2 (ENSRNOG00000032410) #15	Slc46a3 (ENSRNOG00000000937) #16	Pomp (ENSRNOG00000049229) ##17	Flt1 (ENSRNOG00000000940) #18	Pan3 (ENSRNOG00000000942) #19	Flt3 (ENSRNOG00000054764) #20	Urad (ENSRNOG00000050360) #21	Cdx2 (ENSRNOG00000032759) #22	Pdx1 (ENSRNOG00000046458) #23	Gsx1 (ENSRNOG00000000952) #24	Polr1d (ENSRNOG00000000954) #26	Lnx2 (ENSRNOG00000000955) #27	Mtif3 (ENSRNOG00000070811) #28	Gtf3a (ENSRNOG00000050016) #29	Rasl11a (ENSRNOG00000000956) #30	Rpl21 (ENSRNOG00000000957)	Usp12 (ENSRNOG00000033411) #31	Gpr12 (ENSRNOG00000039832) #32	Wasf3 (ENSRNOG00000048898) #33	LOC120095889 (ENSRNOG00000050264)	LOC684427 (ENSRNOG00000069792)	AABR07035338.1 (ENSRNOG00000039819) #34	Rnf6 (ENSRNOG00000000968) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1878	Medag (ENSNGAG00000021713) #8	Alox5ap (ENSNGAG00000010455) #9	Uspl1 (ENSNGAG00000021450) #10	ENSNGAG00000020735 ##11	Katnal1 (ENSNGAG00000018344) #12	Ubl3 (ENSNGAG00000021531) #13	Slc7a1 (ENSNGAG00000011095) #14	ENSNGAG00000023043 #15	ENSNGAG00000011243 ##15	ENSNGAG00000022087	Slc46a3 (ENSNGAG00000023221) #16	ENSNGAG00000019389 #17	Flt1 (ENSNGAG00000022615) #18	Pan3 (ENSNGAG00000005671) #19	Flt3 (ENSNGAG00000022203) #20	Cdx2 (ENSNGAG00000019299) #22	Pdx1 (ENSNGAG00000024275) #23	ENSNGAG00000011527	Gsx1 (ENSNGAG00000013964) #24	ENSNGAG00000020643	ENSNGAG00000019459 #25	Polr1d (ENSNGAG00000006014) #26	Lnx2 (ENSNGAG00000010972) #27	Mtif3 (ENSNGAG00000022911) #28	Gtf3a (ENSNGAG00000023691) #29	Rasl11a (ENSNGAG00000021721) #30	ENSNGAG00000022375	ENSNGAG00000012493	Usp12 (ENSNGAG00000023867) #31	ENSNGAG00000011492
Kangaroo rat	MODERN SPECIES	421	Medag (ENSDORG00000008557) #8	Alox5ap (ENSDORG00000006041) #9	Uspl1 (ENSDORG00000007790) #10	ENSDORG00000027930 #11	Katnal1 (ENSDORG00000012794) #12	Ubl3 (ENSDORG00000026903) #13	ENSDORG00000026706	Slc7a1 (ENSDORG00000006086) #14	ENSDORG00000025782 #15	Slc46a3 (ENSDORG00000012433) #16	Pomp (ENSDORG00000012432) #17	Flt1 (ENSDORG00000014729) #18	Pan3 (ENSDORG00000014727) #19	Flt3 (ENSDORG00000010727) #20	Urad (ENSDORG00000025006) #21	Cdx2 (ENSDORG00000005495) #22	Pdx1 (ENSDORG00000008418) #23	Gsx1 (ENSDORG00000029182) #24	Polr1d (ENSDORG00000029155) #26	Lnx2 (ENSDORG00000013453) #27	ENSDORG00000006081 #28	Gtf3a (ENSDORG00000006079) #29	Rasl11a (ENSDORG00000026016) #30	ENSDORG00000002226	ENSDORG00000002224	Usp12 (ENSDORG00000009137) #31	Gpr12 (ENSDORG00000011141) #32	Wasf3 (ENSDORG00000003345) #33	Cdk8 (ENSDORG00000011151) #34	Rnf6 (ENSDORG00000029431) #35
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00940000165049
Sciuridae	ANCESTRAL SPECIES	34	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a.g.a ##31	ENSGT00950000182922.a.a.a.b.a.a.b.a	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32
Marmotini	ANCESTRAL SPECIES	29	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.b.b ##11	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a.g.a ##31	ENSGT00950000182922.a.a.a.b.a.a.b.a	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00940000158453.a	ENSGT01050000244955.a.a	ENSGT01050000244897.a.b.b.b
Alpin marmot	MODERN SPECIES	13	TEX26 (ENSMMMG00000021931) #7	MEDAG (ENSMMMG00000021928) #8	ALOX5AP (ENSMMMG00000021924) #9	ENSMMMG00000021912 #10	ENSMMMG00000021875 ##11	KATNAL1 (ENSMMMG00000021861) #12	UBL3 (ENSMMMG00000021836) #13	SLC7A1 (ENSMMMG00000021811) #14	ENSMMMG00000021777 #15	SLC46A3 (ENSMMMG00000021759) #16	POMP (ENSMMMG00000021745) #17	FLT1 (ENSMMMG00000021722) #18	PAN3 (ENSMMMG00000021592) #19	FLT3 (ENSMMMG00000021498) #20	ENSMMMG00000021485 #21	CDX2 (ENSMMMG00000021482) #22	GSX1 (ENSMMMG00000021480) #24	POLR1D (ENSMMMG00000021469) #26	LNX2 (ENSMMMG00000021459) #27	MTIF3 (ENSMMMG00000021440) #28	GTF3A (ENSMMMG00000021436) #29	RASL11A (ENSMMMG00000021424) #30	RPL21 (ENSMMMG00000021415)	ENSMMMG00000021402 ##31	ENSMMMG00000021396	GPR12 (ENSMMMG00000021388) #32	SLITRK5 (ENSMMMG00000021362)	ENSMMMG00000021355	GPC5 (ENSMMMG00000021337)	GPC6 (ENSMMMG00000021294)	DCT (ENSMMMG00000021259)
Marmotini_b	ANCESTRAL SPECIES	39	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.a	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00940000158453.a	ENSGT01050000244955.a.a	ENSGT01050000244897.a.b.b.b	ENSGT00940000156856	ENSGT00940000159196
Arctic ground squirrel	MODERN SPECIES	58	MEDAG (ENSUPAG00010000596) #8	ALOX5AP (ENSUPAG00010000582) #9	USPL1 (ENSUPAG00010000537) #10	ENSUPAG00010000514 ##11	KATNAL1 (ENSUPAG00010000483) #12	UBL3 (ENSUPAG00010000449) #13	SLC7A1 (ENSUPAG00010000429) #14	ENSUPAG00010000338 #15	ENSUPAG00010000323	SLC46A3 (ENSUPAG00010000307) #16	POMP (ENSUPAG00010000279) #17	FLT1 (ENSUPAG00010000212) #18	PAN3 (ENSUPAG00010000039) #19	FLT3 (ENSUPAG00010018139) #20	ENSUPAG00010018133 #21	CDX2 (ENSUPAG00010018125) #22	PDX1 (ENSUPAG00010018122) #23	GSX1 (ENSUPAG00010018112) #24	POLR1D (ENSUPAG00010018107) #26	LNX2 (ENSUPAG00010018096) #27	MTIF3 (ENSUPAG00010018090) #28	GTF3A (ENSUPAG00010018082) #29	RASL11A (ENSUPAG00010018073) #30	ENSUPAG00010018061	USP12 (ENSUPAG00010018049) #31	GPR12 (ENSUPAG00010018043) #32	SLITRK5 (ENSUPAG00010018031)
Squirrel	MODERN SPECIES	72	ENSSTOG00000020892	MEDAG (ENSSTOG00000003534) #8	ALOX5AP (ENSSTOG00000010915) #9	USPL1 (ENSSTOG00000028023) #10	ENSSTOG00000000443 #11	KATNAL1 (ENSSTOG00000008802) #12	UBL3 (ENSSTOG00000012777) #13	SLC7A1 (ENSSTOG00000012771) #14	ENSSTOG00000022794 #15	SLC46A3 (ENSSTOG00000013694) #16	POMP (ENSSTOG00000013687) #17	FLT1 (ENSSTOG00000021178) #18	PAN3 (ENSSTOG00000009453) #19	FLT3 (ENSSTOG00000002925) #20	ENSSTOG00000028014 #21	ENSSTOG00000002918 #22	PDX1 (ENSSTOG00000028173) #23	GSX1 (ENSSTOG00000029234) #24	POLR1D (ENSSTOG00000013877) #26	LNX2 (ENSSTOG00000013869) #27	MTIF3 (ENSSTOG00000013866) #28	GTF3A (ENSSTOG00000013853) #29	RASL11A (ENSSTOG00000023879) #30	ENSSTOG00000033637	USP12 (ENSSTOG00000011364) #31	ENSSTOG00000023839	GPR12 (ENSSTOG00000011362) #32	SLITRK5 (ENSSTOG00000022257)	ENSSTOG00000029870	GPC6 (ENSSTOG00000025649)	DCT (ENSSTOG00000010422)
Eurasian red squirrel	MODERN SPECIES	13	TEX26 (ENSSVLG00005022083) #7	MEDAG (ENSSVLG00005022152) #8	ALOX5AP (ENSSVLG00005022177) #9	USPL1 (ENSSVLG00005022232) #10	ENSSVLG00005022302 ##11	KATNAL1 (ENSSVLG00005022343) #12	UBL3 (ENSSVLG00005022374) #13	SLC7A1 (ENSSVLG00005022416) #14	MTUS2 (ENSSVLG00005022484) #15	SLC46A3 (ENSSVLG00005022784) #16	POMP (ENSSVLG00005022839) #17	FLT1 (ENSSVLG00005022893) #18	PAN3 (ENSSVLG00005022998) #19	FLT3 (ENSSVLG00005023095) #20	URAD (ENSSVLG00005023233)	CDX2 (ENSSVLG00005023249) #22	PDX1 (ENSSVLG00005023276) #23	GSX1 (ENSSVLG00005023295) #24	POLR1D (ENSSVLG00005023318) #26	LNX2 (ENSSVLG00005023366) #27	MTIF3 (ENSSVLG00005023396) #28	GTF3A (ENSSVLG00005023413) #29	RASL11A (ENSSVLG00005023466) #30	ENSSVLG00005000213	ENSSVLG00005000350 ##31	GPR12 (ENSSVLG00005000385) #32	ENSSVLG00005000420	ENSSVLG00005000440	SLITRK5 (ENSSVLG00005000517)	ENSSVLG00005000527	ENSSVLG00005000550
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.p #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.c #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00940000165049
Naked mole-rat female	MODERN SPECIES	2	USPL1 (ENSHGLG00000036213) #10	ENSHGLG00000003352 ##11	KATNAL1 (ENSHGLG00000003538) #12	UBL3 (ENSHGLG00000040587) #13	ENSHGLG00000033244	ENSHGLG00000019220 #14	ENSHGLG00000013589 #15	ENSHGLG00000012383	ENSHGLG00000039882 ##17	SLC46A3 (ENSHGLG00000007999) #16	ENSHGLG00000008991 #17	FLT1 (ENSHGLG00000003643) #18	PAN3 (ENSHGLG00000018782) #19	FLT3 (ENSHGLG00000005717) #20	URAD (ENSHGLG00000008479)	CDX2 (ENSHGLG00000009166) #22	PDX1 (ENSHGLG00000010243) #23	GSX1 (ENSHGLG00000039858) #24	ENSHGLG00000003202	POLR1D (ENSHGLG00000039229) #26	LNX2 (ENSHGLG00000003410) #27	MTIF3 (ENSHGLG00000003959) #28	ENSHGLG00000004173 #29	RASL11A (ENSHGLG00000005304) #30	ENSHGLG00000005660	ENSHGLG00000006711 #31	GPR12 (ENSHGLG00000042343) #32	WASF3 (ENSHGLG00000006350) #33	ENSHGLG00000006446	CDK8 (ENSHGLG00000007563) #34	RNF6 (ENSHGLG00000008194) #35
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.p #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.c #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00940000165049
Guinea pig	MODERN SPECIES	6	ENSCPOG00000035490	ENSCPOG00000007441	MEDAG (ENSCPOG00000003921) #8	ALOX5AP (ENSCPOG00000032690) #9	USPL1 (ENSCPOG00000009937) #10	HMGB1 (ENSCPOG00000031835) ##11	KATNAL1 (ENSCPOG00000000804) #12	UBL3 (ENSCPOG00000036242) #13	SLC7A1 (ENSCPOG00000005590) #14	ENSCPOG00000005581 #15	SLC46A3 (ENSCPOG00000015460) #16	POMP (ENSCPOG00000001710) #17	FLT1 (ENSCPOG00000013357) #18	PAN3 (ENSCPOG00000013349) #19	FLT3 (ENSCPOG00000007285) #20	CDX2 (ENSCPOG00000007276) #22	PDX1 (ENSCPOG00000024534) #23	ENSCPOG00000026854	ENSCPOG00000033461	LNX2 (ENSCPOG00000010152) #27	MTIF3 (ENSCPOG00000010148) #28	GTF3A (ENSCPOG00000010143) #29	RASL11A (ENSCPOG00000031264) #30	ENSCPOG00000008784	USP12 (ENSCPOG00000005241) #31	ENSCPOG00000020112	WASF3 (ENSCPOG00000010156) #33	CDK8 (ENSCPOG00000040435) #34	RNF6 (ENSCPOG00000009120) #35	SHISA2 (ENSCPOG00000009049)	ATP8A2 (ENSCPOG00000032003)
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.p #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.c #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.j #35	ENSGT00940000165049
Degu	MODERN SPECIES	79	ENSODEG00000006120 ##11	KATNAL1 (ENSODEG00000005926) #12	UBL3 (ENSODEG00000005571) #13	ENSODEG00000005438	SLC7A1 (ENSODEG00000005306) #14	ENSODEG00000005871 #15	ENSODEG00000006635	SLC46A3 (ENSODEG00000006238) #16	ENSODEG00000005569	ENSODEG00000005111 #17	ENSODEG00000006274 #18	ENSODEG00000006016	PAN3 (ENSODEG00000005038) #19	FLT3 (ENSODEG00000007884) #20	ENSODEG00000007620 #21	CDX2 (ENSODEG00000007340) #22	PDX1 (ENSODEG00000005235) #23	ENSODEG00000019134	GSX1 (ENSODEG00000005135) #24	ENSODEG00000006454	ENSODEG00000005294 #26	LNX2 (ENSODEG00000006222) #27	MTIF3 (ENSODEG00000006818) #28	GTF3A (ENSODEG00000006725) #29	RASL11A (ENSODEG00000005775) #30	ENSODEG00000005022	USP12 (ENSODEG00000006744) #31	GPR12 (ENSODEG00000006388) #32	WASF3 (ENSODEG00000005353) #33	ENSODEG00000005140	ENSODEG00000006456 #34
Long-tailed chinchilla	MODERN SPECIES	204											SLC46A3 (ENSCLAG00000009379) #16	POMP (ENSCLAG00000008609) #17	FLT1 (ENSCLAG00000008187) #18	PAN3 (ENSCLAG00000007575) #19	FLT3 (ENSCLAG00000007093) #20	CDX2 (ENSCLAG00000006810) #22	PDX1 (ENSCLAG00000006652) #23	GSX1 (ENSCLAG00000004357) #24	ENSCLAG00000004320	POLR1D (ENSCLAG00000017623) #26	LNX2 (ENSCLAG00000004148) #27	MTIF3 (ENSCLAG00000004080) #28	GTF3A (ENSCLAG00000003912) #29	RASL11A (ENSCLAG00000003867) #30	Rpl21 (ENSCLAG00000003656)	USP12 (ENSCLAG00000003543) #31	GPR12 (ENSCLAG00000003409) #32	WASF3 (ENSCLAG00000003372) #33	CDK8 (ENSCLAG00000003311) #34	RNF6 (ENSCLAG00000003242) #35	ENSCLAG00000003030
Lagomorpha	ANCESTRAL SPECIES	166								ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h #31
Rabbit	MODERN SPECIES	468							SLC7A1 (ENSOCUG00000013493) #14	ENSOCUG00000030839 #15	ENSOCUG00000013473 #15	SLC46A3 (ENSOCUG00000010129) #16	POMP (ENSOCUG00000010137) #17	FLT1 (ENSOCUG00000008523) #18	PAN3 (ENSOCUG00000008509) #19	FLT3 (ENSOCUG00000004897) #20	URAD (ENSOCUG00000026219)	CDX2 (ENSOCUG00000004893) #22	PDX1 (ENSOCUG00000004891) #23	GSX1 (ENSOCUG00000023424) #24	ENSOCUG00000015706	LNX2 (ENSOCUG00000015683) #27	MTIF3 (ENSOCUG00000011721) #28	GTF3A (ENSOCUG00000011713) #29	ENSOCUG00000038419	RASL11A (ENSOCUG00000008121) #30	ENSOCUG00000002506	USP12 (ENSOCUG00000007088) #31
Pika	MODERN SPECIES	1637															URAD (ENSOPRG00000003060)	CDX2 (ENSOPRG00000003043) #22	ENSOPRG00000003035	LNX2 (ENSOPRG00000003017) #27
Tree shrew	MODERN SPECIES	7903															URAD (ENSTBEG00000005892)	CDX2 (ENSTBEG00000006155) #22
Primates	ANCESTRAL SPECIES	29	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049	ENSGT00940000157443
Strepsirrhini	ANCESTRAL SPECIES	41	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00950000183120.e.b.a.a.b.b.a.b.b #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000153284.a.h #31	ENSGT00940000159187	ENSGT00390000016695	ENSGT00940000153259.a.a.b.d	ENSGT00950000183171.B	ENSGT00730000111659	ENSGT00940000154936.qb
Lemuriformes_a	ANCESTRAL SPECIES	218														ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000153284.a.h #31
Coquerels sifaka	MODERN SPECIES	436														FLT3 (ENSPCOG00000024372) #20	ENSPCOG00000024369 #21	CDX2 (ENSPCOG00000017128) #22	PDX1 (ENSPCOG00000006631) #23	GSX1 (ENSPCOG00000018002) #24	POLR1D (ENSPCOG00000028175) #26	LNX2 (ENSPCOG00000027388) #27	MTIF3 (ENSPCOG00000025631) #28	GTF3A (ENSPCOG00000016742) #29	RASL11A (ENSPCOG00000009447) #30	ENSPCOG00000024417	USP12 (ENSPCOG00000027540) #31	SGCG (ENSPCOG00000024563)	SACS (ENSPCOG00000014915)	TNFRSF19 (ENSPCOG00000024171)	MIPEP (ENSPCOG00000022864)	ENSPCOG00000020115	ENSPCOG00000010750
Greater bamboo lemur	MODERN SPECIES	742														FLT3 (ENSPSMG00000023610) #20	URAD (ENSPSMG00000023629)	CDX2 (ENSPSMG00000023632) #22	PDX1 (ENSPSMG00000023637) #23	GSX1 (ENSPSMG00000023639) #24	ENSPSMG00000023644	LNX2 (ENSPSMG00000023653) #27	MTIF3 (ENSPSMG00000023658) #28	GTF3A (ENSPSMG00000023668) #29	RASL11A (ENSPSMG00000023672) #30	ENSPSMG00000023677	ENSPSMG00000023686	USP12 (ENSPSMG00000023737) #31
Mouse lemur	MODERN SPECIES	4	ALOX5AP (ENSMICG00000001953) #9	USPL1 (ENSMICG00000045622) #10	ENSMICG00000007144 #11	KATNAL1 (ENSMICG00000004250) #12	UBL3 (ENSMICG00000033508) #13	SLC7A1 (ENSMICG00000016312) #14	ENSMICG00000032922 #15	ENSMICG00000016299 #15	SLC46A3 (ENSMICG00000016295) #16	POMP (ENSMICG00000032068) #17	FLT1 (ENSMICG00000016251) #18	PAN3 (ENSMICG00000016237) #19	ENSMICG00000027752	FLT3 (ENSMICG00000016201) #20	ENSMICG00000032881 #21	CDX2 (ENSMICG00000031345) #22	PDX1 (ENSMICG00000043487) #23	GSX1 (ENSMICG00000044124) #24	ENSMICG00000016883 #26	LNX2 (ENSMICG00000016873) #27	MTIF3 (ENSMICG00000014777) #28	GTF3A (ENSMICG00000014763) #29	RASL11A (ENSMICG00000029724) #30	ENSMICG00000006269 #31	ENSMICG00000028275	SGCG (ENSMICG00000038162)	SACS (ENSMICG00000034895)	ENSMICG00000042745	MIPEP (ENSMICG00000036068)	ENSMICG00000047845	ENSMICG00000045668
Bushbaby	MODERN SPECIES	235	USPL1 (ENSOGAG00000015490) #10	ENSOGAG00000026314	ENSOGAG00000030054	ENSOGAG00000003205 #11	KATNAL1 (ENSOGAG00000011308) #12	UBL3 (ENSOGAG00000004035) #13	SLC7A1 (ENSOGAG00000010813) #14	MTUS2 (ENSOGAG00000010807) #15	SLC46A3 (ENSOGAG00000006042) #16	POMP (ENSOGAG00000006044) #17	FLT1 (ENSOGAG00000014611) #18	PAN3 (ENSOGAG00000014604) #19	ENSOGAG00000031357	FLT3 (ENSOGAG00000016694) #20	ENSOGAG00000016692 #21	CDX2 (ENSOGAG00000026117) #22	PDX1 (ENSOGAG00000016688) #23	GSX1 (ENSOGAG00000011242) #24	POLR1D (ENSOGAG00000014601) #26	LNX2 (ENSOGAG00000014599) #27	MTIF3 (ENSOGAG00000014597) #28	GTF3A (ENSOGAG00000014589) #29	RASL11A (ENSOGAG00000008177) #30	ENSOGAG00000008181	ENSOGAG00000030191	USP12 (ENSOGAG00000030639) #31	GPR12 (ENSOGAG00000006144) #32	WASF3 (ENSOGAG00000006728) #33	ENSOGAG00000026985	CDK8 (ENSOGAG00000006569) #34	RNF6 (ENSOGAG00000024893) #35
Haplorrhini	ANCESTRAL SPECIES	43	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.b.b ##11	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443	ENSGT00940000157332
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443	ENSGT00940000157332
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.b.b ##11	ENSGT00950000183120.e.b.b.b ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443	ENSGT00940000157332
Cebidae	ANCESTRAL SPECIES	26	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.b.b.b.b ##11	ENSGT00950000183120.e.b.b.b ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443	ENSGT00940000157332
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.b.b ##11	ENSGT00940000156630 #12	ENSGT00390000011417.k.d	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443	ENSGT00940000157332
Capuchin	MODERN SPECIES	103	ENSCCAG00000032047	ENSCCAG00000028011 ##11	KATNA1 (ENSCCAG00000029984) #12	UBL3 (ENSCCAG00000021780) #13	CIAPIN1 (ENSCCAG00000020425)	SLC7A1 (ENSCCAG00000000822) #14	MTUS2 (ENSCCAG00000025313) #15	SLC46A3 (ENSCCAG00000025858) #16	POMP (ENSCCAG00000027871) #17	FLT1 (ENSCCAG00000035784) #18	ENSCCAG00000000468	PAN3 (ENSCCAG00000021218) #19	ENSCCAG00000027785	FLT3 (ENSCCAG00000022587) #20	ENSCCAG00000029430 #21	CDX2 (ENSCCAG00000025801) #22	PDX1 (ENSCCAG00000036295) #23	GSX1 (ENSCCAG00000025929) #24	ENSCCAG00000021349 #26	LNX2 (ENSCCAG00000020368) #27	ENSCCAG00000026568	MTIF3 (ENSCCAG00000036048) #28	GTF3A (ENSCCAG00000029730) #29	RASL11A (ENSCCAG00000021842) #30	ENSCCAG00000031101	USP12 (ENSCCAG00000023369) #31	ENSCCAG00000021328	GPR12 (ENSCCAG00000020040) #32	WASF3 (ENSCCAG00000029799) #33	CDK8 (ENSCCAG00000037833) #34	RNF6 (ENSCCAG00000037182) #35
Bolivian squirrel monkey	MODERN SPECIES	42	ENSSBOG00000020013	UBL3 (ENSSBOG00000009211) #13	ENSSBOG00000028866	SLC7A1 (ENSSBOG00000020061) #14	MTUS2 (ENSSBOG00000026505) #15	ENSSBOG00000019071	SLC46A3 (ENSSBOG00000025396) #16	POMP (ENSSBOG00000032229) #17	FLT1 (ENSSBOG00000015766) #18	ENSSBOG00000020899	PAN3 (ENSSBOG00000020298) #19	ENSSBOG00000032374	FLT3 (ENSSBOG00000026666) #20	ENSSBOG00000020835	ENSSBOG00000027743 #21	CDX2 (ENSSBOG00000031573) #22	PDX1 (ENSSBOG00000031436) #23	GSX1 (ENSSBOG00000026103) #24	ENSSBOG00000015416	ENSSBOG00000028482 #26	ENSSBOG00000014497	LNX2 (ENSSBOG00000025148) #27	MTIF3 (ENSSBOG00000030469) #28	GTF3A (ENSSBOG00000002098) #29	RASL11A (ENSSBOG00000025363) #30	ENSSBOG00000031441	ENSSBOG00000023626 #31	GPR12 (ENSSBOG00000015914) #32	WASF3 (ENSSBOG00000025202) #33	CDK8 (ENSSBOG00000031790) #34	RNF6 (ENSSBOG00000022531) #35
Marmoset	MODERN SPECIES	17	ENSCJAG00000079039	KATNAL1 (ENSCJAG00000021612) #12	UBL3 (ENSCJAG00000019517) #13	ENSCJAG00000058143	SLC7A1 (ENSCJAG00000019515) #14	ENSCJAG00000072801	MTUS2 (ENSCJAG00000019500) #15	SLC46A3 (ENSCJAG00000019491) #16	POMP (ENSCJAG00000019473) #17	ENSCJAG00000080582	FLT1 (ENSCJAG00000019447) #18	PAN3 (ENSCJAG00000019421) #19	ENSCJAG00000073991	FLT3 (ENSCJAG00000019405) #20	ENSCJAG00000019404 #21	CDX2 (ENSCJAG00000019398) #22	ENSCJAG00000076582	PDX1 (ENSCJAG00000078316) #23	GSX1 (ENSCJAG00000080181) #24	POLR1D (ENSCJAG00000044669) #26	LNX2 (ENSCJAG00000019379) #27	MTIF3 (ENSCJAG00000019378) #28	GTF3A (ENSCJAG00000077697) #29	RASL11A (ENSCJAG00000019369) #30	ENSCJAG00000044684	ENSCJAG00000069611	ENSCJAG00000073678	USP12 (ENSCJAG00000019344) #31	ENSCJAG00000086732	GPR12 (ENSCJAG00000019338) #32	WASF3 (ENSCJAG00000019325) #33
Mas night monkey	MODERN SPECIES	331									ENSANAG00000035277 #17	FLT1 (ENSANAG00000027521) #18	ENSANAG00000028102	PAN3 (ENSANAG00000028419) #19	ENSANAG00000034890	FLT3 (ENSANAG00000025242) #20	URAD (ENSANAG00000029018)	CDX2 (ENSANAG00000030392) #22	PDX1 (ENSANAG00000033534) #23	GSX1 (ENSANAG00000020508) #24	POLR1D (ENSANAG00000024486) #26	LNX2 (ENSANAG00000028866) #27	ENSANAG00000024188	MTIF3 (ENSANAG00000031630) #28	GTF3A (ENSANAG00000019293) #29	RASL11A (ENSANAG00000027999) #30	ENSANAG00000023031	ENSANAG00000032118 #31	NUP58 (ENSANAG00000023073)	MTMR6 (ENSANAG00000025737)	AMER2 (ENSANAG00000025607)
Catarrhini	ANCESTRAL SPECIES	21	ENSGT00910000148031	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153889.e.b.a.d.a	ENSGT00910000147093	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00910000148031	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153889.e.b.a.d.a	ENSGT00910000147093	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443	ENSGT00940000157332
Hominidae	ANCESTRAL SPECIES	23	ENSGT00390000004952.b #13	ENSGT00910000148031	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153889.f	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443	ENSGT00940000157332
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00910000148031	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153889.f	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443	ENSGT00940000157332
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00910000148031	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153889.f	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443	ENSGT00940000157332
Pan	ANCESTRAL SPECIES	22	ENSGT00390000004952.b #13	ENSGT00910000148031	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00930000151026.f	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153889.f	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00390000015470.z.b	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Chimpanzee	MODERN SPECIES	4	UBL3 (ENSPTRG00000005751) #13	ENSPTRG00000049804	SLC7A1 (ENSPTRG00000005750) #14	ENSPTRG00000046056	MTUS2 (ENSPTRG00000005747) #15	ENSPTRG00000045489	SLC46A3 (ENSPTRG00000005746) #16	POMP (ENSPTRG00000005745) #17	ENSPTRG00000046663	ENSPTRG00000045890	FLT1 (ENSPTRG00000005743) #18	PAN3 (ENSPTRG00000005742) #19	ENSPTRG00000046829	FLT3 (ENSPTRG00000005740) #20	URAD (ENSPTRG00000005739)	CDX2 (ENSPTRG00000043330) #22	ENSPTRG00000005737	PDX1 (ENSPTRG00000005736) #23	GSX1 (ENSPTRG00000005735) #24	POLR1D (ENSPTRG00000005734) #26	LNX2 (ENSPTRG00000005733) #27	MTIF3 (ENSPTRG00000005732) #28	GTF3A (ENSPTRG00000005730) #29	RASL11A (ENSPTRG00000005729) #30	RPL21 (ENSPTRG00000005728)	USP12 (ENSPTRG00000005727) #31	GPR12 (ENSPTRG00000046989) #32	WASF3 (ENSPTRG00000005725) #33	CDK8 (ENSPTRG00000005724) #34	RNF6 (ENSPTRG00000005723) #35	SHISA2 (ENSPTRG00000047295)
Bonobo	MODERN SPECIES	4	ENSPPAG00000037440	KATNAL1 (ENSPPAG00000033530) #12	UBL3 (ENSPPAG00000027496) #13	ENSPPAG00000015303	SLC7A1 (ENSPPAG00000037016) #14	ENSPPAG00000034238	MTUS2 (ENSPPAG00000032687) #15	ENSPPAG00000027903	SLC46A3 (ENSPPAG00000035795) #16	POMP (ENSPPAG00000036286) #17	ENSPPAG00000027416	ENSPPAG00000033250 #18	ENSPPAG00000030264	PAN3 (ENSPPAG00000027826) #19	FLT3 (ENSPPAG00000015701) #20	CDX2 (ENSPPAG00000032963) #22	ENSPPAG00000032440	ENSPPAG00000032720 #23	GSX1 (ENSPPAG00000032556) #24	ENSPPAG00000028138 #26	LNX2 (ENSPPAG00000027444) #27	MTIF3 (ENSPPAG00000027304) #28	GTF3A (ENSPPAG00000034725) #29	RASL11A (ENSPPAG00000027996) #30	ENSPPAG00000042860	ENSPPAG00000007246 #31	GPR12 (ENSPPAG00000007707) #32	WASF3 (ENSPPAG00000035699) #33	CDK8 (ENSPPAG00000035126) #34	RNF6 (ENSPPAG00000035870) #35	SHISA2 (ENSPPAG00000032206)
Human	MODERN SPECIES	4	MEDAG (ENSG00000102802) #8	ALOX5AP (ENSG00000132965) #9	USPL1 (ENSG00000132952) #10	HMGB1 (ENSG00000189403) ##11	UBE2L5 (ENSG00000236444)	KATNAL1 (ENSG00000102781) #12	UBL3 (ENSG00000122042) #13	SLC7A1 (ENSG00000139514) #14	MTUS2 (ENSG00000132938) #15	SLC46A3 (ENSG00000139508) #16	POMP (ENSG00000132963) #17	FLT1 (ENSG00000102755) #18	PAN3 (ENSG00000152520) #19	FLT3 (ENSG00000122025) #20	URAD (ENSG00000183463)	CDX2 (ENSG00000165556) #22	PDX1 (ENSG00000139515) #23	GSX1 (ENSG00000169840) #24	POLR1D (ENSG00000186184) #26	LNX2 (ENSG00000139517) #27	MTIF3 (ENSG00000122033) #28	GTF3A (ENSG00000122034) #29	RASL11A (ENSG00000122035) #30	RPL21 (ENSG00000122026)	USP12 (ENSG00000152484) #31	GPR12 (ENSG00000132975) #32	WASF3 (ENSG00000132970) #33	CDK8 (ENSG00000132964) #34	RNF6 (ENSG00000127870) #35	SHISA2 (ENSG00000180730)	ATP8A2 (ENSG00000132932)
Gorilla	MODERN SPECIES	4	USPL1 (ENSGGOG00000004673) #10	HMGB1 (ENSGGOG00000026764) ##11	UBE2L5 (ENSGGOG00000006857)	ENSGGOG00000024714	KATNAL1 (ENSGGOG00000026875) #12	UBL3 (ENSGGOG00000023146) #13	ENSGGOG00000042729	SLC46A3 (ENSGGOG00000014254) #16	POMP (ENSGGOG00000015316) #17	ENSGGOG00000036780	ENSGGOG00000036812	FLT1 (ENSGGOG00000008750) #18	PAN3 (ENSGGOG00000016079) #19	FLT3 (ENSGGOG00000000882) #20	URAD (ENSGGOG00000005489)	CDX2 (ENSGGOG00000005487) #22	PDX1 (ENSGGOG00000002569) #23	GSX1 (ENSGGOG00000005011) #24	POLR1D (ENSGGOG00000004235) #26	LNX2 (ENSGGOG00000016167) #27	MTIF3 (ENSGGOG00000041079) #28	GTF3A (ENSGGOG00000008407) #29	RASL11A (ENSGGOG00000008785) #30	ENSGGOG00000003002	ENSGGOG00000011358 #31	GPR12 (ENSGGOG00000000849) #32	WASF3 (ENSGGOG00000012518) #33	CDK8 (ENSGGOG00000006569) #34	RNF6 (ENSGGOG00000006568) #35	ENSGGOG00000025679	ATP8A2 (ENSGGOG00000003045)
Orangutan	MODERN SPECIES	4	ENSPPYG00000031030	KATNAL1 (ENSPPYG00000005253) #12	UBL3 (ENSPPYG00000037129) #13	ENSPPYG00000034870	SLC7A1 (ENSPPYG00000005250) #14	MTUS2 (ENSPPYG00000005249) #15	SLC46A3 (ENSPPYG00000005248) #16	POMP (ENSPPYG00000005247) #17	ENSPPYG00000038952	ENSPPYG00000034417	FLT1 (ENSPPYG00000005246) #18	PAN3 (ENSPPYG00000005245) #19	ENSPPYG00000040072	FLT3 (ENSPPYG00000005244) #20	URAD (ENSPPYG00000005243)	CDX2 (ENSPPYG00000005242) #22	ENSPPYG00000005241	PDX1 (ENSPPYG00000005240) #23	GSX1 (ENSPPYG00000005239) #24	ENSPPYG00000005238	LNX2 (ENSPPYG00000005237) #27	MTIF3 (ENSPPYG00000005236) #28	GTF3A (ENSPPYG00000005235) #29	RASL11A (ENSPPYG00000005234) #30	RPL21 (ENSPPYG00000005233)	USP12 (ENSPPYG00000005232) #31	GPR12 (ENSPPYG00000005231) #32	WASF3 (ENSPPYG00000005230) #33	CDK8 (ENSPPYG00000005229) #34	RNF6 (ENSPPYG00000005228) #35	SHISA2 (ENSPPYG00000030544)
Gibbon	MODERN SPECIES	24	SLC7A1 (ENSNLEG00000000622) #14	ENSNLEG00000035615 #15	ENSNLEG00000033304	ENSNLEG00000000618 #15	SLC46A3 (ENSNLEG00000000599) #16	POMP (ENSNLEG00000000572) #17	ENSNLEG00000000571	ENSNLEG00000033802	ENSNLEG00000030098	FLT1 (ENSNLEG00000000456) #18	PAN3 (ENSNLEG00000000388) #19	ENSNLEG00000029210	ENSNLEG00000035718	FLT3 (ENSNLEG00000000372) #20	URAD (ENSNLEG00000000369)	CDX2 (ENSNLEG00000000365) #22	PDX1 (ENSNLEG00000000362) #23	GSX1 (ENSNLEG00000000360) #24	ENSNLEG00000000358 #26	LNX2 (ENSNLEG00000000345) #27	MTIF3 (ENSNLEG00000000343) #28	GTF3A (ENSNLEG00000000331) #29	RASL11A (ENSNLEG00000000329) #30	ENSNLEG00000000327	ENSNLEG00000000323 #31	ATP2B4 (ENSNLEG00000018117)	ENSNLEG00000033057	OPTC (ENSNLEG00000018116)	PRELP (ENSNLEG00000018115)	FMOD (ENSNLEG00000018114)	BTG2 (ENSNLEG00000034785)
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00910000148031	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153889.e.b.a.d.a	ENSGT00910000147093	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000165378.d	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00950000183120.e.b.a.a.a.n ##11	ENSGT00940000156630 #12	ENSGT00940000155828.o.a	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000165378.d	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Vervet Monkey	MODERN SPECIES	22	HSPH1 (ENSCSAG00000017943)	TEX26 (ENSCSAG00000017946) #7	MEDAG (ENSCSAG00000017948) #8	ALOX5AP (ENSCSAG00000017950) #9	USPL1 (ENSCSAG00000017953) #10	KATNAL1 (ENSCSAG00000017958) #12	UBL3 (ENSCSAG00000017959) #13	SLC7A1 (ENSCSAG00000017961) #14	MTUS2 (ENSCSAG00000017964) #15	SLC46A3 (ENSCSAG00000017966) #16	POMP (ENSCSAG00000017967) #17	FLT1 (ENSCSAG00000017969) #18	PAN3 (ENSCSAG00000017971) #19	FLT3 (ENSCSAG00000017973) #20	URAD (ENSCSAG00000017975)	CDX2 (ENSCSAG00000017976) #22	PDX1 (ENSCSAG00000017977) #23	GSX1 (ENSCSAG00000017979) #24	ENSCSAG00000017980	LNX2 (ENSCSAG00000017981) #27	MTIF3 (ENSCSAG00000017982) #28	GTF3A (ENSCSAG00000017983) #29	RASL11A (ENSCSAG00000017985) #30	ENSCSAG00000017986 #31	GPR12 (ENSCSAG00000018592) #32	WASF3 (ENSCSAG00000017987) #33	CDK8 (ENSCSAG00000017989) #34	RNF6 (ENSCSAG00000017991) #35	SHISA2 (ENSCSAG00000017992)	ATP8A2 (ENSCSAG00000017997)	NUP58 (ENSCSAG00000018000)
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153783.a	ENSGT00910000147093	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00910000147903	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000165378.d	ENSGT00940000157104 #34
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153783.a	ENSGT00910000147093	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00910000147903	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000165378.d	ENSGT00940000157104 #34	ENSGT00940000158530 #35
Olive baboon	MODERN SPECIES	6	ALOX5AP (ENSPANG00000020217) #9	USPL1 (ENSPANG00000005488) #10	HMGB1 (ENSPANG00000007200) ##11	UBE2L5 (ENSPANG00000043221)	KATNAL1 (ENSPANG00000023364) #12	UBL3 (ENSPANG00000008471) #13	SLC7A1 (ENSPANG00000012138) #14	MTUS2 (ENSPANG00000013682) #15	SLC46A3 (ENSPANG00000020218) #16	POMP (ENSPANG00000046275) #17	ENSPANG00000044787	FLT1 (ENSPANG00000009892) #18	PAN3 (ENSPANG00000001988) #19	FLT3 (ENSPANG00000009315) #20	URAD (ENSPANG00000014018)	CDX2 (ENSPANG00000050183) #22	PDX1 (ENSPANG00000012683) #23	ENSPANG00000047094	GSX1 (ENSPANG00000017129) #24	ENSPANG00000038544	ENSPANG00000020259 #26	LNX2 (ENSPANG00000012983) #27	MTIF3 (ENSPANG00000005047) #28	GTF3A (ENSPANG00000012593) #29	RASL11A (ENSPANG00000044196) #30	ENSPANG00000011984	USP12 (ENSPANG00000011533) #31	GPR12 (ENSPANG00000003061) #32	WASF3 (ENSPANG00000009058) #33	CDK8 (ENSPANG00000001990) #34	RNF6 (ENSPANG00000005719) #35
Cercopithecinae_d	ANCESTRAL SPECIES	93	ENSGT00910000148031	ENSGT00940000155349 #14	ENSGT00910000147174	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153783.a	ENSGT00910000147093	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00910000147903	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000165378.d	ENSGT00940000157104 #34	ENSGT00940000158530 #35
Drill	MODERN SPECIES	1324						ENSMLEG00000006158 ##15	SLC46A3 (ENSMLEG00000044293) #16	POMP (ENSMLEG00000039576) #17	ENSMLEG00000042438	ENSMLEG00000036390	ENSMLEG00000038076	FLT1 (ENSMLEG00000034284) #18	ENSMLEG00000003098	PAN3 (ENSMLEG00000008619) #19	FLT3 (ENSMLEG00000037398) #20	CDX2 (ENSMLEG00000037430) #22	PDX1 (ENSMLEG00000032316) #23	ENSMLEG00000041805	ENSMLEG00000041048 #26	LNX2 (ENSMLEG00000039062) #27	MTIF3 (ENSMLEG00000039110) #28	GTF3A (ENSMLEG00000039703) #29	RASL11A (ENSMLEG00000036089) #30	ENSMLEG00000024280	ENSMLEG00000033598 #31	GPR12 (ENSMLEG00000002545) #32	WASF3 (ENSMLEG00000040168) #33	CDK8 (ENSMLEG00000040071) #34	RNF6 (ENSMLEG00000038569) #35	SHISA2 (ENSMLEG00000034103)	ENSMLEG00000036990
Sooty mangabey	MODERN SPECIES	255		ENSCATG00000034802	SLC7A1 (ENSCATG00000025899) #14	ENSCATG00000037549	MTUS2 (ENSCATG00000041831) #15	SLC46A3 (ENSCATG00000021488) #16	POMP (ENSCATG00000037462) #17	ENSCATG00000033485	ENSCATG00000028829	ENSCATG00000024438	FLT1 (ENSCATG00000034541) #18	PAN3 (ENSCATG00000030893) #19	ENSCATG00000032726	FLT3 (ENSCATG00000014529) #20	URAD (ENSCATG00000007826)	CDX2 (ENSCATG00000007363) #22	PDX1 (ENSCATG00000035793) #23	GSX1 (ENSCATG00000028004) #24	ENSCATG00000002488	ENSCATG00000030710 #26	LNX2 (ENSCATG00000035354) #27	MTIF3 (ENSCATG00000007775) #28	GTF3A (ENSCATG00000032361) #29	RASL11A (ENSCATG00000033838) #30	ENSCATG00000032591	ENSCATG00000038452 #31	ENSCATG00000018180	GPR12 (ENSCATG00000018217) #32	WASF3 (ENSCATG00000037570) #33	ENSCATG00000032759	CDK8 (ENSCATG00000021984) #34
Macaca	ANCESTRAL SPECIES	19	ENSGT00950000183120.e.b.a.b ##11	ENSGT00940000155828.o.a	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000153783.a	ENSGT00910000147093	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00910000147903	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35
Pig-tailed macaque	MODERN SPECIES	165	ENSMNEG00000019179	ST6GAL2 (ENSMNEG00000036708)	ENSMNEG00000022050	SLC5A7 (ENSMNEG00000039266)	SLC7A1 (ENSMNEG00000044453) #14	MTUS2 (ENSMNEG00000039238) #15	SLC46A3 (ENSMNEG00000038996) #16	POMP (ENSMNEG00000031404) #17	ENSMNEG00000043904	ENSMNEG00000028177	FLT1 (ENSMNEG00000032149) #18	PAN3 (ENSMNEG00000032817) #19	ENSMNEG00000043801	FLT3 (ENSMNEG00000032442) #20	URAD (ENSMNEG00000045421)	CDX2 (ENSMNEG00000043440) #22	PDX1 (ENSMNEG00000032095) #23	GSX1 (ENSMNEG00000032682) #24	ENSMNEG00000008630 #26	ENSMNEG00000034652	LNX2 (ENSMNEG00000040860) #27	MTIF3 (ENSMNEG00000032443) #28	GTF3A (ENSMNEG00000043473) #29	RASL11A (ENSMNEG00000033345) #30	ENSMNEG00000034115	ENSMNEG00000039505 #31	GPR12 (ENSMNEG00000010974) #32	WASF3 (ENSMNEG00000028711) #33	CDK8 (ENSMNEG00000031167) #34	RNF6 (ENSMNEG00000000673) #35	ATP8A2 (ENSMNEG00000037319)
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.b ##11	ENSGT00940000155828.o.a	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00910000147093	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00440000038159.p.b	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT01100000263493.a.b.a.a.b.a.b.b	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.a.b.a	ENSGT00940000153284.a.h.i.a #31	ENSGT00940000164709.a.b.b.b.b.a	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT01100000263539.b.a.a.a.b.b.a.a.a.a.b.a.a.b
Crab-eating macaque	MODERN SPECIES	8	UBE2L5 (ENSMFAG00000045697)	ENSMFAG00000053527	KATNAL1 (ENSMFAG00000053013) #12	UBL3 (ENSMFAG00000044955) #13	SLC7A1 (ENSMFAG00000043457) #14	MTUS2 (ENSMFAG00000032200) #15	SLC46A3 (ENSMFAG00000030072) #16	POMP (ENSMFAG00000025369) #17	ENSMFAG00000039222	FLT1 (ENSMFAG00000035718) #18	PAN3 (ENSMFAG00000025538) #19	ENSMFAG00000063510	ENSMFAG00000052223	FLT3 (ENSMFAG00000044854) #20	URAD (ENSMFAG00000043442)	CDX2 (ENSMFAG00000051158) #22	PDX1 (ENSMFAG00000063371) #23	GSX1 (ENSMFAG00000037158) #24	ENSMFAG00000045264	LNX2 (ENSMFAG00000045245) #27	ENSMFAG00000050995	MTIF3 (ENSMFAG00000045045) #28	GTF3A (ENSMFAG00000044837) #29	RASL11A (ENSMFAG00000044628) #30	ENSMFAG00000053340	ENSMFAG00000062305	USP12 (ENSMFAG00000031734) #31	ENSMFAG00000050832	ENSMFAG00000058696	GPR12 (ENSMFAG00000033581) #32	WASF3 (ENSMFAG00000006706) #33
Rhesus	MODERN SPECIES	8	ENSMMUG00000052770	HMGB1 (ENSMMUG00000046615) ##11	ENSMMUG00000058466	UBE2L5 (ENSMMUG00000008940)	KATNAL1 (ENSMMUG00000004922) #12	UBL3 (ENSMMUG00000003771) #13	SLC7A1 (ENSMMUG00000008661) #14	MTUS2 (ENSMMUG00000008658) #15	SLC46A3 (ENSMMUG00000013721) #16	POMP (ENSMMUG00000058998) #17	ENSMMUG00000063649	FLT1 (ENSMMUG00000021538) #18	PAN3 (ENSMMUG00000022522) #19	FLT3 (ENSMMUG00000016139) #20	URAD (ENSMMUG00000016138)	CDX2 (ENSMMUG00000052070) #22	PDX1 (ENSMMUG00000064615) #23	GSX1 (ENSMMUG00000004507) #24	POLR1D (ENSMMUG00000020386)	LNX2 (ENSMMUG00000058786) #27	ENSMMUG00000059867	MTIF3 (ENSMMUG00000009030) #28	GTF3A (ENSMMUG00000009029) #29	RASL11A (ENSMMUG00000049650) #30	ENSMMUG00000058755	ENSMMUG00000054994	USP12 (ENSMMUG00000021425) #31	ENSMMUG00000050226	ENSMMUG00000057481	GPR12 (ENSMMUG00000060819) #32	WASF3 (ENSMMUG00000005055) #33
Rhinopithecus	ANCESTRAL SPECIES	56	ENSGT00390000004952.b #13	ENSGT00910000148031	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00910000147174	ENSGT00950000183026.A.b ##15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.i #17	ENSGT00940000153889.e.b.a.d.a	ENSGT00910000147093	ENSGT00910000146937	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160.x #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT00940000153284.a.h.j #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000165378.d	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Black snub-nosed monkey	MODERN SPECIES	1391		UBL3 (ENSRBIG00000032584) #13	ENSRBIG00000024318	SLC7A1 (ENSRBIG00000030519) #14	MTUS2 (ENSRBIG00000042717) #15	ENSRBIG00000043698	SLC46A3 (ENSRBIG00000039296) #16	ENSRBIG00000028141 #17	ENSRBIG00000040184	ENSRBIG00000017410	ENSRBIG00000034378	FLT1 (ENSRBIG00000036952) #18	PAN3 (ENSRBIG00000036981) #19	FLT3 (ENSRBIG00000042399) #20	ENSRBIG00000030643 #21	CDX2 (ENSRBIG00000038667) #22	PDX1 (ENSRBIG00000039353) #23	GSX1 (ENSRBIG00000032182) #24	ENSRBIG00000036378 #26	LNX2 (ENSRBIG00000028850) #27	MTIF3 (ENSRBIG00000027271) #28	GTF3A (ENSRBIG00000044964) #29	RASL11A (ENSRBIG00000043749) #30	ENSRBIG00000036802	ENSRBIG00000041212 #31	GPR12 (ENSRBIG00000001744) #32	WASF3 (ENSRBIG00000033396) #33	CDK8 (ENSRBIG00000040781) #34	ENSRBIG00000044340	RNF6 (ENSRBIG00000035200) #35	SHISA2 (ENSRBIG00000029204)
Golden snub-nosed monkey	MODERN SPECIES	603					ENSRROG00000029261 ##15	SLC46A3 (ENSRROG00000013197) #16	ENSRROG00000035051 #17	ENSRROG00000028953	ENSRROG00000036924	ENSRROG00000044673	FLT1 (ENSRROG00000044082) #18	PAN3 (ENSRROG00000044835) #19	ENSRROG00000038089	FLT3 (ENSRROG00000032511) #20	URAD (ENSRROG00000032393)	CDX2 (ENSRROG00000036416) #22	PDX1 (ENSRROG00000038796) #23	GSX1 (ENSRROG00000032356) #24
Tarsier	MODERN SPECIES	5212									OPN5 (ENSTSYG00000005962)	ADGRF4 (ENSTSYG00000002483)	ENSTSYG00000002476	CD2AP (ENSTSYG00000002464)	ENSTSYG00000034627	PAN3 (ENSTSYG00000011845) #19	FLT3 (ENSTSYG00000011237) #20	ENSTSYG00000029265 #22
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161261 #22
Hedgehog	MODERN SPECIES	5979																CDX2 (ENSEEUG00000005045) #22
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Suina	ANCESTRAL SPECIES	29	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Pig	MODERN SPECIES	2	TEX26 (ENSSSCG00000046261) #7	MEDAG (ENSSSCG00000009331) #8	ALOX5AP (ENSSSCG00000009330) #9	USPL1 (ENSSSCG00000028065) #10	ENSSSCG00000009327 ##11	KATNAL1 (ENSSSCG00000009326) #12	ENSSSCG00000035992 #13	SLC7A1 (ENSSSCG00000029456) #14	MTUS2 (ENSSSCG00000025996) #15	SLC46A3 (ENSSSCG00000009322) #16	POMP (ENSSSCG00000037170) #17	FLT1 (ENSSSCG00000009320) #18	PAN3 (ENSSSCG00000009319) #19	FLT3 (ENSSSCG00000009314) #20	ENSSSCG00000009316 #21	CDX2 (ENSSSCG00000009317) #22	PDX1 (ENSSSCG00000055811) #23	GSX1 (ENSSSCG00000009313) #24	POLR1D (ENSSSCG00000009310) #26	LNX2 (ENSSSCG00000009308) #27	MTIF3 (ENSSSCG00000037313) #28	GTF3A (ENSSSCG00000009305) #29	RASL11A (ENSSSCG00000039890) #30	ENSSSCG00000009303	USP12 (ENSSSCG00000009302) #31	GPR12 (ENSSSCG00000009301) #32	ENSSSCG00000042074	WASF3 (ENSSSCG00000009300) #33	CDK8 (ENSSSCG00000009298) #34	RNF6 (ENSSSCG00000024064) #35	ENSSSCG00000023771
Chacoan peccary	MODERN SPECIES	216	MEDAG (ENSCWAG00000017233) #8	ALOX5AP (ENSCWAG00000017261) #9	USPL1 (ENSCWAG00000017300) #10	HMGB1 (ENSCWAG00000017323) ##11	KATNAL1 (ENSCWAG00000017366) #12	UBL3 (ENSCWAG00000017400) #13	SLC7A1 (ENSCWAG00000017449) #14	MTUS2 (ENSCWAG00000017501) #15	SLC46A3 (ENSCWAG00000017732) #16	POMP (ENSCWAG00000017771) #17	ENSCWAG00000017809	FLT1 (ENSCWAG00000017867) #18	PAN3 (ENSCWAG00000018033) #19	FLT3 (ENSCWAG00000018108) #20	URAD (ENSCWAG00000018244)	CDX2 (ENSCWAG00000018265) #22	PDX1 (ENSCWAG00000018319) #23	GSX1 (ENSCWAG00000018331) #24	POLR1D (ENSCWAG00000018355) #26	LNX2 (ENSCWAG00000018415) #27	MTIF3 (ENSCWAG00000018433) #28	GTF3A (ENSCWAG00000018454) #29	ENSCWAG00000018472	RASL11A (ENSCWAG00000018481) #30	RPL21 (ENSCWAG00000018513)	USP12 (ENSCWAG00000018548) #31	ENSCWAG00000018581	GPR12 (ENSCWAG00000018600) #32	WASF3 (ENSCWAG00000018614) #33	CDK8 (ENSCWAG00000018646) #34	ENSCWAG00000018769
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Camelidae	ANCESTRAL SPECIES	14	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Arabian camel	MODERN SPECIES	5	MEDAG (ENSCDRG00005005141) #8	ALOX5AP (ENSCDRG00005005116) #9	USPL1 (ENSCDRG00005005085) #10	HMGB1 (ENSCDRG00005005045) ##11	KATNAL1 (ENSCDRG00005005025) #12	UBL3 (ENSCDRG00005005011) #13	SLC7A1 (ENSCDRG00005004941) #14	ENSCDRG00005004898 #15	ENSCDRG00005004864 #15	SLC46A3 (ENSCDRG00005004813) #16	POMP (ENSCDRG00005004772) #17	FLT1 (ENSCDRG00005003978) #18	PAN3 (ENSCDRG00005003669) #19	FLT3 (ENSCDRG00005003607) #20	ENSCDRG00005003574 #21	ENSCDRG00005003530 #22	PDX1 (ENSCDRG00005003496) #23	GSX1 (ENSCDRG00005003464) #24	POLR1D (ENSCDRG00005003401) #26	LNX2 (ENSCDRG00005003360) #27	MTIF3 (ENSCDRG00005003341) #28	GTF3A (ENSCDRG00005021807) #29	RASL11A (ENSCDRG00005021802) #30	ENSCDRG00005021795	USP12 (ENSCDRG00005021790) #31	GPR12 (ENSCDRG00005021787) #32	WASF3 (ENSCDRG00005021785) #33	CDK8 (ENSCDRG00005021779) #34	RNF6 (ENSCDRG00005021774) #35	SHISA2 (ENSCDRG00005021770)	ENSCDRG00005021765
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Cetacea	ANCESTRAL SPECIES	20	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00510000047760.j	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00510000047760.j	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b.i #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Odontoceti_a	ANCESTRAL SPECIES	24	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B.r #15	ENSGT00510000047760.j	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b.i #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B.r #15	ENSGT00510000047760.j	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b.i #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B.r #15	ENSGT00510000047760.j	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b.i #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157443
Beluga whale	MODERN SPECIES	29	MEDAG (ENSDLEG00000005244) #8	ALOX5AP (ENSDLEG00000005233) #9	USPL1 (ENSDLEG00000005228) #10	HMGB1 (ENSDLEG00000005222) ##11	KATNAL1 (ENSDLEG00000015700) #12	UBL3 (ENSDLEG00000015684) #13	SLC7A1 (ENSDLEG00000015661) #14	MTUS2 (ENSDLEG00000015621) #15	ENSDLEG00000015614	SLC46A3 (ENSDLEG00000015606) #16	ENSDLEG00000015594 #17	FLT1 (ENSDLEG00000015551) #18	PAN3 (ENSDLEG00000015462) #19	FLT3 (ENSDLEG00000014957) #20	ENSDLEG00000014887	CDX2 (ENSDLEG00000014871) #22	PDX1 (ENSDLEG00000014860) #23	GSX1 (ENSDLEG00000014854) #24	ENSDLEG00000014844	POLR1D (ENSDLEG00000014833) #26	LNX2 (ENSDLEG00000014818) #27	MTIF3 (ENSDLEG00000014809) #28	GTF3A (ENSDLEG00000014795) #29	RASL11A (ENSDLEG00000014782) #30	RPL21 (ENSDLEG00000014757)	USP12 (ENSDLEG00000014742) #31	GPR12 (ENSDLEG00000014734) #32	WASF3 (ENSDLEG00000014723) #33	CDK8 (ENSDLEG00000014684) #34	RNF6 (ENSDLEG00000014673) #35	SHISA2 (ENSDLEG00000014665)
Narwhal	MODERN SPECIES	315	HSPH1 (ENSMMNG00015020078)	MEDAG (ENSMMNG00015020156) #8	ALOX5AP (ENSMMNG00015020175) #9	USPL1 (ENSMMNG00015020212) #10	HMGB1 (ENSMMNG00015020245) ##11	KATNAL1 (ENSMMNG00015020263) #12	UBL3 (ENSMMNG00015020289) #13	SLC7A1 (ENSMMNG00015020307) #14	MTUS2 (ENSMMNG00015020336) #15	SLC46A3 (ENSMMNG00015020455) #16	ENSMMNG00015020477 #17	FLT1 (ENSMMNG00015020525) #18	PAN3 (ENSMMNG00015020615) #19	FLT3 (ENSMMNG00015020792) #20	URAD (ENSMMNG00015020821)	CDX2 (ENSMMNG00015020842) #22	PDX1 (ENSMMNG00015020863) #23	GSX1 (ENSMMNG00015020877) #24	ENSMMNG00015020896	LNX2 (ENSMMNG00015020919) #27	MTIF3 (ENSMMNG00015020934) #28	GTF3A (ENSMMNG00015020949) #29	ENSMMNG00015020968	RASL11A (ENSMMNG00015020985) #30	ENSMMNG00015020992	USP12 (ENSMMNG00015021025) #31	GPR12 (ENSMMNG00015021041) #32	WASF3 (ENSMMNG00015021063) #33	CDK8 (ENSMMNG00015021096) #34	RNF6 (ENSMMNG00015021148) #35	SHISA2 (ENSMMNG00015021160)
Vaquita	MODERN SPECIES	9	ALOX5AP (ENSPSNG00000012197) #9	USPL1 (ENSPSNG00000012125) #10	HMGB1 (ENSPSNG00000012042) ##11	KATNAL1 (ENSPSNG00000011976) #12	UBL3 (ENSPSNG00000011923) #13	SLC7A1 (ENSPSNG00000011868) #14	ENSPSNG00000011712 #15	ENSPSNG00000011610	SLC46A3 (ENSPSNG00000011519) #16	ENSPSNG00000011451 #17	ENSPSNG00000011404	FLT1 (ENSPSNG00000010996) #18	PAN3 (ENSPSNG00000010591) #19	FLT3 (ENSPSNG00000009789) #20	URAD (ENSPSNG00000009637)	CDX2 (ENSPSNG00000009587) #22	PDX1 (ENSPSNG00000009545) #23	GSX1 (ENSPSNG00000009508) #24	ENSPSNG00000009434 #26	LNX2 (ENSPSNG00000009360) #27	MTIF3 (ENSPSNG00000009318) #28	GTF3A (ENSPSNG00000009270) #29	RASL11A (ENSPSNG00000009220) #30	ENSPSNG00000009136	USP12 (ENSPSNG00000009102) #31	GPR12 (ENSPSNG00000009076) #32	ENSPSNG00000009063	WASF3 (ENSPSNG00000009017) #33	CDK8 (ENSPSNG00000008895) #34	RNF6 (ENSPSNG00000008824) #35	SHISA2 (ENSPSNG00000008758)
Sperm whale	MODERN SPECIES	4	MEDAG (ENSPCTG00005015216) #8	ALOX5AP (ENSPCTG00005015171) #9	USPL1 (ENSPCTG00005015111) #10	HMGB1 (ENSPCTG00005015034) ##11	KATNAL1 (ENSPCTG00005014985) #12	UBL3 (ENSPCTG00005014919) #13	SLC7A1 (ENSPCTG00005014850) #14	MTUS2 (ENSPCTG00005014659) #15	ENSPCTG00005014618	SLC46A3 (ENSPCTG00005014585) #16	POMP (ENSPCTG00005014527) #17	FLT1 (ENSPCTG00005014294) #18	PAN3 (ENSPCTG00005014160) #19	FLT3 (ENSPCTG00005013790) #20	ENSPCTG00005013732	CDX2 (ENSPCTG00005013676) #22	PDX1 (ENSPCTG00005013620) #23	GSX1 (ENSPCTG00005013569) #24	POLR1D (ENSPCTG00005013390) #26	LNX2 (ENSPCTG00005013292) #27	MTIF3 (ENSPCTG00005013236) #28	GTF3A (ENSPCTG00005013180) #29	RASL11A (ENSPCTG00005013101) #30	RPL21 (ENSPCTG00005013013)	USP12 (ENSPCTG00005012963) #31	ENSPCTG00005012908	GPR12 (ENSPCTG00005012894) #32	WASF3 (ENSPCTG00005012829) #33	CDK8 (ENSPCTG00005012757) #34	RNF6 (ENSPCTG00005012717) #35	SHISA2 (ENSPCTG00005012685)
Blue whale	MODERN SPECIES	9	MEDAG (ENSBMSG00010015612) #8	ALOX5AP (ENSBMSG00010015580) #9	USPL1 (ENSBMSG00010015554) #10	HMGB1 (ENSBMSG00010015522) ##11	KATNAL1 (ENSBMSG00010015496) #12	UBL3 (ENSBMSG00010015451) #13	SLC7A1 (ENSBMSG00010015357) #14	ENSBMSG00010015247 #15	ENSBMSG00010015221	SLC46A3 (ENSBMSG00010015191) #16	ENSBMSG00010015155 #17	FLT1 (ENSBMSG00010014949) #18	PAN3 (ENSBMSG00010014764) #19	FLT3 (ENSBMSG00010014623) #20	URAD (ENSBMSG00010014592)	CDX2 (ENSBMSG00010014566) #22	PDX1 (ENSBMSG00010014538) #23	GSX1 (ENSBMSG00010014529) #24	ENSBMSG00010014466 #26	LNX2 (ENSBMSG00010014414) #27	MTIF3 (ENSBMSG00010014375) #28	GTF3A (ENSBMSG00010014329) #29	ENSBMSG00010014311	RASL11A (ENSBMSG00010014298) #30	ENSBMSG00010014255	USP12 (ENSBMSG00010014225) #31	GPR12 (ENSBMSG00010014207) #32	WASF3 (ENSBMSG00010014112) #33	CDK8 (ENSBMSG00010014007) #34	RNF6 (ENSBMSG00010022445) #35	SHISA2 (ENSBMSG00010022444)
Pecora	ANCESTRAL SPECIES	23	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Percora_a	ANCESTRAL SPECIES	25	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Bovidae	ANCESTRAL SPECIES	25	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f.e.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Caprinae	ANCESTRAL SPECIES	28	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643.k	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424.g #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f.e.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Goat	MODERN SPECIES	3	TEX26 (ENSCHIG00000013376) #7	MEDAG (ENSCHIG00000019733) #8	ALOX5AP (ENSCHIG00000020532) #9	USPL1 (ENSCHIG00000025535) #10	HMGB1 (ENSCHIG00000018473) ##11	KATNAL1 (ENSCHIG00000011417) #12	UBL3 (ENSCHIG00000005881) #13	SLC7A1 (ENSCHIG00000017131) #14	MTUS2 (ENSCHIG00000014951) #15	SLC46A3 (ENSCHIG00000006252) #16	ENSCHIG00000007021 #17	FLT1 (ENSCHIG00000019587) #18	PAN3 (ENSCHIG00000010876) #19	FLT3 (ENSCHIG00000006089) #20	ENSCHIG00000015696 #21	CDX2 (ENSCHIG00000024755) #22	PDX1 (ENSCHIG00000016212) #23	GSX1 (ENSCHIG00000026107) #24	ENSCHIG00000014902	POLR1D (ENSCHIG00000021910) #26	LNX2 (ENSCHIG00000024542) #27	ENSCHIG00000026996 #28	ENSCHIG00000021040 #29	RASL11A (ENSCHIG00000016902) #30	RPL21 (ENSCHIG00000021720)	USP12 (ENSCHIG00000006817) #31	GPR12 (ENSCHIG00000007944) #32	WASF3 (ENSCHIG00000017657) #33	CDK8 (ENSCHIG00000006655) #34	RNF6 (ENSCHIG00000020161) #35	ENSCHIG00000018640
Rambouillet Sheep	MODERN SPECIES	1	ENSOARG00020008926	TEX26 (ENSOARG00020009149) #7	MEDAG (ENSOARG00020009224) #8	ALOX5AP (ENSOARG00020009284) #9	HMGB1 (ENSOARG00020009396) ##11	KATNAL1 (ENSOARG00020009464) #12	UBL3 (ENSOARG00020009591) #13	SLC7A1 (ENSOARG00020009646) #14	ENSOARG00020009812 #15	SLC46A3 (ENSOARG00020009919) #16	ENSOARG00020010005 #17	FLT1 (ENSOARG00020010103) #18	PAN3 (ENSOARG00020010540) #19	FLT3 (ENSOARG00020011519) #20	URAD (ENSOARG00020011747)	CDX2 (ENSOARG00020011783) #22	PDX1 (ENSOARG00020011821) #23	GSX1 (ENSOARG00020011857) #24	POLR1D (ENSOARG00020011900) #26	LNX2 (ENSOARG00020012002) #27	MTIF3 (ENSOARG00020012058) #28	ENSOARG00020012106 #29	ENSOARG00020012160 #29	RASL11A (ENSOARG00020012287) #30	ENSOARG00020012335	ENSOARG00020012435 #34	USP12 (ENSOARG00020012488) #31	GPR12 (ENSOARG00020012619) #32	WASF3 (ENSOARG00020012645) #33	ENSOARG00020012817 #34	RNF6 (ENSOARG00020012931) #35
Bovinae	ANCESTRAL SPECIES	29	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f.e.a.a	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
American bison	MODERN SPECIES	3213										SLC46A3 (ENSBBBG00000012388) #16	POMP (ENSBBBG00000002357) #17	FLT1 (ENSBBBG00000012485) #18	PAN3 (ENSBBBG00000012554) #19	FLT3 (ENSBBBG00000012586) #20	URAD (ENSBBBG00000008107)	ENSBBBG00000012601 #22	PDX1 (ENSBBBG00000001839) #23	GSX1 (ENSBBBG00000001841) #24	ENSBBBG00000012613	POLR1D (ENSBBBG00000012618) #26	LNX2 (ENSBBBG00000012639) #27	ENSBBBG00000012643 #28	GTF3A (ENSBBBG00000012669) #29	RASL11A (ENSBBBG00000007545) #30	ENSBBBG00000012692	USP12 (ENSBBBG00000002455) #31	GPR12 (ENSBBBG00000012732) #32	WASF3 (ENSBBBG00000002463) #33	CDK8 (ENSBBBG00000001797) #34	RNF6 (ENSBBBG00000012758) #35	ENSBBBG00000012975
Bos	ANCESTRAL SPECIES	28	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f.e.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Bos_b	ANCESTRAL SPECIES	33	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT01100000263481.n.a.b.b.a.b.b.a.a.b.a.b	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f.e.a.a	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Hybrid Bos Indicus	MODERN SPECIES	3	ALOX5AP (ENSBIXG00005000697) #9	USPL1 (ENSBIXG00005010560) #10	ENSBIXG00005010515 ##11	ENSBIXG00005006774	KATNAL1 (ENSBIXG00005000876) #12	ENSBIXG00005000793	UBL3 (ENSBIXG00005010348) #13	SLC7A1 (ENSBIXG00005006772) #14	MTUS2 (ENSBIXG00005010291) #15	SLC46A3 (ENSBIXG00005000810) #16	POMP (ENSBIXG00005010225) #17	FLT1 (ENSBIXG00005010159) #18	PAN3 (ENSBIXG00005005472) #19	FLT3 (ENSBIXG00005005466) #20	ENSBIXG00005000568 #21	CDX2 (ENSBIXG00005000565) #22	PDX1 (ENSBIXG00005005368) #23	GSX1 (ENSBIXG00005009693) #24	POLR1D (ENSBIXG00005009666) #26	LNX2 (ENSBIXG00005009616) #27	ENSBIXG00005009581 #29	MTIF3 (ENSBIXG00005000533) #28	RASL11A (ENSBIXG00005009524) #30	ENSBIXG00005009506	USP12 (ENSBIXG00005000510) #31	GPR12 (ENSBIXG00005005366) #32	WASF3 (ENSBIXG00005009436) #33	CDK8 (ENSBIXG00005009401) #34	RNF6 (ENSBIXG00005009338) #35	ENSBIXG00005009305	ENSBIXG00005009251
Cow	MODERN SPECIES	3	TEX26 (ENSBTAG00000033386) #7	MEDAG (ENSBTAG00000008271) #8	ALOX5AP (ENSBTAG00000013201) #9	USPL1 (ENSBTAG00000001178) #10	HMGB1 (ENSBTAG00000018103) ##11	KATNAL1 (ENSBTAG00000009340) #12	ENSBTAG00000052411	UBL3 (ENSBTAG00000012170) #13	SLC7A1 (ENSBTAG00000018577) #14	MTUS2 (ENSBTAG00000001094) #15	POMP (ENSBTAG00000014024) #17	FLT1 (ENSBTAG00000016915) #18	PAN3 (ENSBTAG00000009912) #19	FLT3 (ENSBTAG00000018572) #20	URAD (ENSBTAG00000013819) #21	CDX2 (ENSBTAG00000001819) #22	PDX1 (ENSBTAG00000010690) #23	GSX1 (ENSBTAG00000009166) #24	ENSBTAG00000048386	POLR1D (ENSBTAG00000008642) #26	LNX2 (ENSBTAG00000015614) #27	MTIF3 (ENSBTAG00000020530) #28	GTF3A (ENSBTAG00000012600) #29	RASL11A (ENSBTAG00000005244) #30	RPL21 (ENSBTAG00000001648)	USP12 (ENSBTAG00000017179) #31	GPR12 (ENSBTAG00000010769) #32	WASF3 (ENSBTAG00000014619) #33	ENSBTAG00000049013	CDK8 (ENSBTAG00000016737) #34	RNF6 (ENSBTAG00000005318) #35
Bos_a	ANCESTRAL SPECIES	19	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00390000003643	ENSGT00940000154361.A #24	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f.e.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049	ENSGT00940000157443
Domestic yak	MODERN SPECIES	6	ALOX5AP (ENSBGRG00000007328) #9	USPL1 (ENSBGRG00000007239) #10	ENSBGRG00000007221	ENSBGRG00000007092 ##11	KATNAL1 (ENSBGRG00000006924) #12	UBL3 (ENSBGRG00000006856) #13	SLC7A1 (ENSBGRG00000006751) #14	MTUS2 (ENSBGRG00000006670) #15	SLC46A3 (ENSBGRG00000006624) #16	POMP (ENSBGRG00000006553) #17	ENSBGRG00000006327 #18	ENSBGRG00000006167	PAN3 (ENSBGRG00000005813) #19	FLT3 (ENSBGRG00000005369) #20	ENSBGRG00000005297 #21	CDX2 (ENSBGRG00000005271) #22	PDX1 (ENSBGRG00000005259) #23	ENSBGRG00000005252	ENSBGRG00000005241	GSX1 (ENSBGRG00000005224) #24	ENSBGRG00000005177	LNX2 (ENSBGRG00000005122) #27	MTIF3 (ENSBGRG00000005098) #28	GTF3A (ENSBGRG00000004973) #29	RASL11A (ENSBGRG00000004923) #30	ENSBGRG00000004884	USP12 (ENSBGRG00000004775) #31	ENSBGRG00000004746	ENSBGRG00000004721	GPR12 (ENSBGRG00000004706) #32	WASF3 (ENSBGRG00000004578) #33
Wild yak	MODERN SPECIES	1372																ENSBMUG00000023200 #22	PDX1 (ENSBMUG00000023207) #23	ENSBMUG00000023232
Siberian musk deer	MODERN SPECIES	18	TEX26 (ENSMMSG00000002369) #7	MEDAG (ENSMMSG00000002386) #8	ALOX5AP (ENSMMSG00000002405) #9	USPL1 (ENSMMSG00000002424) #10	ENSMMSG00000002453 ##11	KATNAL1 (ENSMMSG00000002485) #12	UBL3 (ENSMMSG00000002504) #13	SLC7A1 (ENSMMSG00000002527) #14	MTUS2 (ENSMMSG00000002573) #15	SLC46A3 (ENSMMSG00000002652) #16	ENSMMSG00000002681 #17	FLT1 (ENSMMSG00000002716) #18	PAN3 (ENSMMSG00000002825) #19	FLT3 (ENSMMSG00000002901) #20	URAD (ENSMMSG00000002960)	CDX2 (ENSMMSG00000002973) #22	PDX1 (ENSMMSG00000002992) #23	ENSMMSG00000003007	GSX1 (ENSMMSG00000003020) #24	POLR1D (ENSMMSG00000003040) #26	LNX2 (ENSMMSG00000003075) #27	MTIF3 (ENSMMSG00000003094) #28	ENSMMSG00000003107 #29	RASL11A (ENSMMSG00000003132) #30	ENSMMSG00000003141	USP12 (ENSMMSG00000003167) #31	GPR12 (ENSMMSG00000003186) #32	WASF3 (ENSMMSG00000003196) #33	CDK8 (ENSMMSG00000003210) #34	RNF6 (ENSMMSG00000003228) #35	ENSMMSG00000003239
Yarkand deer	MODERN SPECIES	23	ALOX5AP (ENSCHYG00000015250) #9	USPL1 (ENSCHYG00000015344) #10	ENSCHYG00000015436 ##11	KATNAL1 (ENSCHYG00000015536) #12	UBL3 (ENSCHYG00000015723) #13	SLC7A1 (ENSCHYG00000015804) #14	MTUS2 (ENSCHYG00000016049) #15	SLC46A3 (ENSCHYG00000016561) #16	ENSCHYG00000016630 #17	ENSCHYG00000016696	FLT1 (ENSCHYG00000016765) #18	PAN3 (ENSCHYG00000017249) #19	ENSCHYG00000017919	FLT3 (ENSCHYG00000017983) #20	URAD (ENSCHYG00000018294)	CDX2 (ENSCHYG00000018350) #22	PDX1 (ENSCHYG00000018394) #23	GSX1 (ENSCHYG00000018439) #24	ENSCHYG00000018475 #26	ENSCHYG00000018627	LNX2 (ENSCHYG00000018648) #27	MTIF3 (ENSCHYG00000018756) #28	ENSCHYG00000018814 #29	RASL11A (ENSCHYG00000019009) #30	ENSCHYG00000019062	USP12 (ENSCHYG00000019156) #31	GPR12 (ENSCHYG00000019276) #32	WASF3 (ENSCHYG00000019331) #33	CDK8 (ENSCHYG00000019544) #34	RNF6 (ENSCHYG00000019809) #35	ENSCHYG00000019870
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Carnivora	ANCESTRAL SPECIES	23	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Caniformia	ANCESTRAL SPECIES	24	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Canidae	ANCESTRAL SPECIES	31	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000153425.a.a.b.a	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.a.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000153229.A.b	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000153425.a.a.b.a	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.a.b.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000011067.A.ib.b	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049	ENSGT00940000157443
Dog	MODERN SPECIES	17	USPL1 (ENSCAFG00845021869) #10	HMGB1 (ENSCAFG00845021967) ##11	KATNAL1 (ENSCAFG00845022093) #12	ENSCAFG00845022193	UBL3 (ENSCAFG00845022214) #13	ENSCAFG00845022280	SLC7A1 (ENSCAFG00845022314) #14	MTUS2 (ENSCAFG00845022435) #15	SLC46A3 (ENSCAFG00845022832) #16	POMP (ENSCAFG00845022887) #17	FLT1 (ENSCAFG00845023188) #18	PAN3 (ENSCAFG00845023866) #19	FLT3 (ENSCAFG00845024412) #20	ENSCAFG00845025235	ENSCAFG00845025288 #21	CDX2 (ENSCAFG00845025357) #22	PDX1 (ENSCAFG00845025401) #23	GSX1 (ENSCAFG00845025440) #24	POLR1D (ENSCAFG00845025499)	LNX2 (ENSCAFG00845025569) #27	MTIF3 (ENSCAFG00845025671) #28	GTF3A (ENSCAFG00845025723) #29	RASL11A (ENSCAFG00845025821) #30	RPL21 (ENSCAFG00845025858)	USP12 (ENSCAFG00845025960) #31	ENSCAFG00845026031	GPR12 (ENSCAFG00845026068) #32	WASF3 (ENSCAFG00845026110) #33	CDK8 (ENSCAFG00845026285) #34	RNF6 (ENSCAFG00845026572) #35	ENSCAFG00845016412
Dingo	MODERN SPECIES	304	KATNAL1 (ENSCAFG00020025138) #12	ENSCAFG00020025145	UBL3 (ENSCAFG00020025147) #13	ENSCAFG00020025149	SLC7A1 (ENSCAFG00020025151) #14	MTUS2 (ENSCAFG00020025161) #15	SLC46A3 (ENSCAFG00020025168) #16	ENSCAFG00020025169	ENSCAFG00020025170	ENSCAFG00020025171 #18	ENSCAFG00020025175	PAN3 (ENSCAFG00020025181) #19	FLT3 (ENSCAFG00020025240) #20	ENSCAFG00020025290	ENSCAFG00020025291 #21	CDX2 (ENSCAFG00020025296) #22	PDX1 (ENSCAFG00020025298) #23	GSX1 (ENSCAFG00020025299) #24	ENSCAFG00020025301 #26	LNX2 (ENSCAFG00020025302) #27	MTIF3 (ENSCAFG00020025304) #28	ENSCAFG00020025306 #29	ENSCAFG00020025308 #29	ENSCAFG00020025311	RASL11A (ENSCAFG00020025312) #30	ENSCAFG00020025313	USP12 (ENSCAFG00020025315) #31	GPR12 (ENSCAFG00020025316) #32	WASF3 (ENSCAFG00020025318) #33	CDK8 (ENSCAFG00020025319) #34	RNF6 (ENSCAFG00020025321) #35
Red fox	MODERN SPECIES	22	MEDAG (ENSVVUG00000009731) #8	ALOX5AP (ENSVVUG00000009718) #9	USPL1 (ENSVVUG00000009708) #10	HMGB1 (ENSVVUG00000009534) ##11	KATNAL1 (ENSVVUG00000009499) #12	UBL3 (ENSVVUG00000009455) #13	ENSVVUG00000009450	SLC7A1 (ENSVVUG00000009439) #14	MTUS2 (ENSVVUG00000009413) #15	SLC46A3 (ENSVVUG00000009403) #16	POMP (ENSVVUG00000009398) #17	FLT1 (ENSVVUG00000009356) #18	PAN3 (ENSVVUG00000009313) #19	ENSVVUG00000009307	FLT3 (ENSVVUG00000009247) #20	CDX2 (ENSVVUG00000009237) #22	PDX1 (ENSVVUG00000009234) #23	ENSVVUG00000009233	GSX1 (ENSVVUG00000009230) #24	ENSVVUG00000009220	POLR1D (ENSVVUG00000009216) #26	LNX2 (ENSVVUG00000009209) #27	MTIF3 (ENSVVUG00000009207) #28	GTF3A (ENSVVUG00000009197) #29	RASL11A (ENSVVUG00000009191) #30	RPL21 (ENSVVUG00000009183)	USP12 (ENSVVUG00000009179) #31	GPR12 (ENSVVUG00000009138) #32	WASF3 (ENSVVUG00000009124) #33	CDK8 (ENSVVUG00000009115) #34	RNF6 (ENSVVUG00000009109) #35
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Ursidae	ANCESTRAL SPECIES	27	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Giant Panda	MODERN SPECIES	17	ENSAMEG00000008833	TEX26 (ENSAMEG00000008839) #7	MEDAG (ENSAMEG00000008847) #8	ALOX5AP (ENSAMEG00000023710) #9	ENSAMEG00000008873 #10	ENSAMEG00000008885 #12	UBL3 (ENSAMEG00000008894) #13	SLC7A1 (ENSAMEG00000008899) #14	MTUS2 (ENSAMEG00000008934) #15	SLC46A3 (ENSAMEG00000008953) #16	ENSAMEG00000008961 #17	FLT1 (ENSAMEG00000002209) #18	PAN3 (ENSAMEG00000002349) #19	FLT3 (ENSAMEG00000002354) #20	ENSAMEG00000031229 #21	CDX2 (ENSAMEG00000029013) #22	PDX1 (ENSAMEG00000025378) #23	GSX1 (ENSAMEG00000030161) #24	ENSAMEG00000028974	LNX2 (ENSAMEG00000015845) #27	MTIF3 (ENSAMEG00000015841) #28	GTF3A (ENSAMEG00000015824) #29	ENSAMEG00000029656	RASL11A (ENSAMEG00000015812) #30	RPL21 (ENSAMEG00000031074)	USP12 (ENSAMEG00000001863) #31	ENSAMEG00000024690	GPR12 (ENSAMEG00000019402) #32	WASF3 (ENSAMEG00000001835) #33	CDK8 (ENSAMEG00000001794) #34	RNF6 (ENSAMEG00000001786) #35
Ursus	ANCESTRAL SPECIES	57	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
American black bear	MODERN SPECIES	663														FLT3 (ENSUAMG00000023222) #20	ENSUAMG00000023221 #21	CDX2 (ENSUAMG00000023217) #22	PDX1 (ENSUAMG00000023216) #23	GSX1 (ENSUAMG00000023215) #24
Polar bear	MODERN SPECIES	177	TEX26 (ENSUMAG00000017213) #7	MEDAG (ENSUMAG00000017210) #8	ENSUMAG00000017201 #9	USPL1 (ENSUMAG00000017198) #10	ENSUMAG00000017165 ##11	KATNAL1 (ENSUMAG00000017153) #12	UBL3 (ENSUMAG00000017145) #13	SLC7A1 (ENSUMAG00000017056) #14	ENSUMAG00000017046 #15	SLC46A3 (ENSUMAG00000017030) #16	POMP (ENSUMAG00000017026) #17	ENSUMAG00000017006 #18	ENSUMAG00000017000	PAN3 (ENSUMAG00000016986) #19	FLT3 (ENSUMAG00000016979) #20	ENSUMAG00000016976 #22	ENSUMAG00000016971	POLR1D (ENSUMAG00000016968) #26	LNX2 (ENSUMAG00000016959) #27	MTIF3 (ENSUMAG00000016954) #28	GTF3A (ENSUMAG00000016941) #29	RASL11A (ENSUMAG00000016927) #30	ENSUMAG00000016908	ENSUMAG00000016903	ENSUMAG00000016901	USP12 (ENSUMAG00000016883) #31	GPR12 (ENSUMAG00000016877) #32	WASF3 (ENSUMAG00000016859) #33	CDK8 (ENSUMAG00000016849) #34	RNF6 (ENSUMAG00000016848) #35	ENSUMAG00000016800
Mustelinae	ANCESTRAL SPECIES	109	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643
American mink	MODERN SPECIES	346										S46A3 (ENSNVIG00000003179) #16	ENSNVIG00000003156 #17	FLT1 (ENSNVIG00000002982) #18	PAN3 (ENSNVIG00000002913) #19	FLT3 (ENSNVIG00000002880) #20	URAD (ENSNVIG00000002869)	CDX2 (ENSNVIG00000002864) #22	PDX1 (ENSNVIG00000002855) #23	GSX1 (ENSNVIG00000002846) #24	ENSNVIG00000002786
Ferret	MODERN SPECIES	364	ALOX5AP (ENSMPUG00000004556) #9	USPL1 (ENSMPUG00000004564) #10	HMGB1 (ENSMPUG00000004579) ##11	KATNAL1 (ENSMPUG00000004610) #12	ENSMPUG00000004620	UBL3 (ENSMPUG00000004638) #13	SLC7A1 (ENSMPUG00000004649) #14	MTUS2 (ENSMPUG00000004661) #15	ENSMPUG00000004676	SLC46A3 (ENSMPUG00000004680) #16	POMP (ENSMPUG00000004690) #17	FLT1 (ENSMPUG00000004699) #18	PAN3 (ENSMPUG00000004987) #19	FLT3 (ENSMPUG00000005073) #20	ENSMPUG00000005088 #21	CDX2 (ENSMPUG00000005092) #22	PDX1 (ENSMPUG00000005147) #23	GSX1 (ENSMPUG00000005153) #24	ENSMPUG00000005164
Felidae	ANCESTRAL SPECIES	23	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Cat	MODERN SPECIES		TEX26 (ENSFCAG00000024146) #7	MEDAG (ENSFCAG00000007544) #8	ALOX5AP (ENSFCAG00000037195) #9	USPL1 (ENSFCAG00000022053) #10	HMGB1 (ENSFCAG00000000200) ##11	KATNAL1 (ENSFCAG00000032001) #12	UBL3 (ENSFCAG00000027217) #13	SLC7A1 (ENSFCAG00000014326) #14	MTUS2 (ENSFCAG00000014322) #15	SLC46A3 (ENSFCAG00000008236) #16	POMP (ENSFCAG00000008235) #17	FLT1 (ENSFCAG00000013299) #18	PAN3 (ENSFCAG00000018643) #19	FLT3 (ENSFCAG00000004539) #20	ENSFCAG00000036126 #21	CDX2 (ENSFCAG00000026699) #22	PDX1 (ENSFCAG00000034557) #23	GSX1 (ENSFCAG00000026793) #24	ENSFCAG00000030162	LNX2 (ENSFCAG00000011821) #27	MTIF3 (ENSFCAG00000006985) #28	GTF3A (ENSFCAG00000006982) #29	RASL11A (ENSFCAG00000006749) #30	ENSFCAG00000006750	USP12 (ENSFCAG00000026620) #31	GPR12 (ENSFCAG00000014524) #32	WASF3 (ENSFCAG00000009474) #33	CDK8 (ENSFCAG00000027073) #34	RNF6 (ENSFCAG00000011691) #35	ENSFCAG00000052429	SHISA2 (ENSFCAG00000043175)
Panthera	ANCESTRAL SPECIES	21	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
lion	MODERN SPECIES	1	TEX26 (ENSPLOG00000019557) #7	MEDAG (ENSPLOG00000019748) #8	ALOX5AP (ENSPLOG00000019807) #9	USPL1 (ENSPLOG00000019841) #10	ENSPLOG00000019888 ##11	KATNAL1 (ENSPLOG00000019942) #12	UBL3 (ENSPLOG00000019992) #13	SLC7A1 (ENSPLOG00000020023) #14	ENSPLOG00000020066 #15	SLC46A3 (ENSPLOG00000020203) #16	POMP (ENSPLOG00000020240) #17	FLT1 (ENSPLOG00000020410) #18	PAN3 (ENSPLOG00000020895) #19	FLT3 (ENSPLOG00000021081) #20	URAD (ENSPLOG00000021175)	CDX2 (ENSPLOG00000021193) #22	PDX1 (ENSPLOG00000021216) #23	GSX1 (ENSPLOG00000021227) #24	ENSPLOG00000021249	LNX2 (ENSPLOG00000021288) #27	MTIF3 (ENSPLOG00000021318) #28	GTF3A (ENSPLOG00000021339) #29	RASL11A (ENSPLOG00000021369) #30	ENSPLOG00000021394	USP12 (ENSPLOG00000004064) #31	GPR12 (ENSPLOG00000004075) #32	WASF3 (ENSPLOG00000004088) #33	CDK8 (ENSPLOG00000004108) #34	RNF6 (ENSPLOG00000004130) #35	ENSPLOG00000004137	SHISA2 (ENSPLOG00000004147)
leopard	MODERN SPECIES	14	MEDAG (ENSPPRG00000000734) #8	ALOX5AP (ENSPPRG00000000293) #9	USPL1 (ENSPPRG00000000053) #10	HMGB1 (ENSPPRG00000022869) ##11	KATNAL1 (ENSPPRG00000022045) #12	UBL3 (ENSPPRG00000019662) #13	SLC7A1 (ENSPPRG00000017628) #14	ENSPPRG00000016401 #15	SLC46A3 (ENSPPRG00000015693) #16	POMP (ENSPPRG00000013840) #17	ENSPPRG00000013104 #18	ENSPPRG00000011363	PAN3 (ENSPPRG00000008505) #19	FLT3 (ENSPPRG00000005326) #20	ENSPPRG00000005097 #21	CDX2 (ENSPPRG00000004823) #22	PDX1 (ENSPPRG00000004534) #23	GSX1 (ENSPPRG00000004333) #24	POLR1D (ENSPPRG00000003381) #26	LNX2 (ENSPPRG00000002783) #27	MTIF3 (ENSPPRG00000002497) #28	GTF3A (ENSPPRG00000002368) #29	RASL11A (ENSPPRG00000001350) #30	ENSPPRG00000001012	USP12 (ENSPPRG00000000510) #31	GPR12 (ENSPPRG00000017596) #32	WASF3 (ENSPPRG00000022988) #33	CDK8 (ENSPPRG00000023432) #34	RNF6 (ENSPPRG00000024353) #35	ENSPPRG00000024460	ENSPPRG00000019469
Tiger	MODERN SPECIES	38	TEX26 (ENSPTIG00000017363) #7	MEDAG (ENSPTIG00000018319) #8	ALOX5AP (ENSPTIG00000019272) #9	USPL1 (ENSPTIG00000019771) #10	ENSPTIG00000020002 ##11	KATNAL1 (ENSPTIG00000020391) #12	UBL3 (ENSPTIG00000020762) #13	SLC7A1 (ENSPTIG00000021015) #14	ENSPTIG00000001385 #15	SLC46A3 (ENSPTIG00000005724) #16	POMP (ENSPTIG00000007181) #17	ENSPTIG00000007575 #18	ENSPTIG00000010147	PAN3 (ENSPTIG00000011675) #19	FLT3 (ENSPTIG00000013522) #20	ENSPTIG00000014998 #22	ENSPTIG00000016324	GSX1 (ENSPTIG00000016369) #24	ENSPTIG00000017320	POLR1D (ENSPTIG00000018137) #26	LNX2 (ENSPTIG00000018500) #27	MTIF3 (ENSPTIG00000018642) #28	GTF3A (ENSPTIG00000018958) #29	RASL11A (ENSPTIG00000019926) #30	ENSPTIG00000020228	USP12 (ENSPTIG00000020368) #31	GPR12 (ENSPTIG00000005107) #32	WASF3 (ENSPTIG00000020649) #33	CDK8 (ENSPTIG00000021301) #34	RNF6 (ENSPTIG00000021628) #35	SHISA2 (ENSPTIG00000003520)
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104.m.b #34	ENSGT00940000158530 #35	ENSGT00940000165049
Chiroptera	ANCESTRAL SPECIES	66	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104.m.a #34	ENSGT00940000157104.m.b #34	ENSGT00940000158530 #35	ENSGT00940000157443
Microchiroptera	ANCESTRAL SPECIES	46	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b.f	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104.m.a #34	ENSGT00940000157104.m.b #34	ENSGT00940000158530 #35	ENSGT00940000157443
Microbat	MODERN SPECIES	1164										SLC46A3 (ENSMLUG00000006699) #16	ENSMLUG00000010322 #17	FLT1 (ENSMLUG00000004358) #18	PAN3 (ENSMLUG00000004348) #19	FLT3 (ENSMLUG00000002582) #20	ENSMLUG00000002576 #21	CDX2 (ENSMLUG00000002563) #22	PDX1 (ENSMLUG00000010639) #23	ENSMLUG00000025151	LNX2 (ENSMLUG00000010946) #27	MTIF3 (ENSMLUG00000002161) #28	GTF3A (ENSMLUG00000002158) #29	RASL11A (ENSMLUG00000016335) #30	ENSMLUG00000010093	USP12 (ENSMLUG00000007510) #31	GPR12 (ENSMLUG00000002365) #32
Greater horseshoe bat	MODERN SPECIES	22	MEDAG (ENSRFEG00010000622) #8	ALOX5AP (ENSRFEG00010000601) #9	USPL1 (ENSRFEG00010000567) #10	HMGB1 (ENSRFEG00010000531) ##11	KATNAL1 (ENSRFEG00010000476) #12	UBL3 (ENSRFEG00010000414) #13	SLC7A1 (ENSRFEG00010000293) #14	ENSRFEG00010004420 ##11	MTUS2 (ENSRFEG00010004361) #15	SLC46A3 (ENSRFEG00010004332) #16	ENSRFEG00010004318 #17	FLT1 (ENSRFEG00010004193) #18	PAN3 (ENSRFEG00010004077) #19	FLT3 (ENSRFEG00010004003) #20	ENSRFEG00010003975 #21	CDX2 (ENSRFEG00010003965) #22	PDX1 (ENSRFEG00010003956) #23	GSX1 (ENSRFEG00010003946) #24	ENSRFEG00010003942	ENSRFEG00010003922 #26	LNX2 (ENSRFEG00010003884) #27	MTIF3 (ENSRFEG00010003873) #28	GTF3A (ENSRFEG00010003845) #29	RASL11A (ENSRFEG00010003821) #30	ENSRFEG00010003789	USP12 (ENSRFEG00010003775) #31	GPR12 (ENSRFEG00010003761) #32	ENSRFEG00010003754	WASF3 (ENSRFEG00010003718) #33	CDK8 (ENSRFEG00010003679) #34	RNF6 (ENSRFEG00010003644) #35
Megabat	MODERN SPECIES	906														FLT3 (ENSPVAG00000011525) #20	ENSPVAG00000011523 #21	CDX2 (ENSPVAG00000011522) #22	PDX1 (ENSPVAG00000011521) #23
Equus	ANCESTRAL SPECIES	26	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734.j.b #17	ENSGT00940000158713 #18	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104.m.b #34	ENSGT00940000158530 #35	ENSGT00940000165049
Donkey	MODERN SPECIES	29	ALOX5AP (ENSEASG00005022395) #9	USPL1 (ENSEASG00005022400) #10	HMGB1 (ENSEASG00005032345) ##11	KATNAL1 (ENSEASG00005022416) #12	UBL3 (ENSEASG00005022423) #13	SLC7A1 (ENSEASG00005022432) #14	MTUS2 (ENSEASG00005022449) #15	SLC46A3 (ENSEASG00005022457) #16	ENSEASG00005029421 #17	ENSEASG00005022461 #18	ENSEASG00005029804	PAN3 (ENSEASG00005022467) #19	FLT3 (ENSEASG00005022471) #20	ENSEASG00005003450	ENSEASG00005028208 #21	CDX2 (ENSEASG00005022479) #22	PDX1 (ENSEASG00005022482) #23	GSX1 (ENSEASG00005022483) #24	ENSEASG00005035501	POLR1D (ENSEASG00005022487) #26	LNX2 (ENSEASG00005022490) #27	MTIF3 (ENSEASG00005022492) #28	ENSEASG00005022495 #29	RASL11A (ENSEASG00005034471) #30	ENSEASG00005022501	USP12 (ENSEASG00005022511) #31	GPR12 (ENSEASG00005035884) #32	WASF3 (ENSEASG00005022517) #33	CDK8 (ENSEASG00005022522) #34	RNF6 (ENSEASG00005022526) #35	ENSEASG00005025996
Horse	MODERN SPECIES	8	ALOX5AP (ENSECAG00000012371) #9	USPL1 (ENSECAG00000011889) #10	HMGB1 (ENSECAG00000008439) #11	KATNAL1 (ENSECAG00000004830) #12	UBL3 (ENSECAG00000001318) #13	SLC7A1 (ENSECAG00000015413) #14	MTUS2 (ENSECAG00000013935) #15	SLC46A3 (ENSECAG00000011432) #16	ENSECAG00000048907	POMP (ENSECAG00000011951) #17	ENSECAG00000049171 #18	FLT1 (ENSECAG00000021700)	PAN3 (ENSECAG00000014810) #19	FLT3 (ENSECAG00000002171) #20	ENSECAG00000002049 #21	CDX2 (ENSECAG00000027754) #22	PDX1 (ENSECAG00000000679) #23	GSX1 (ENSECAG00000035168) #24	ENSECAG00000021095	LNX2 (ENSECAG00000017219) #27	MTIF3 (ENSECAG00000016697) #28	GTF3A (ENSECAG00000014803) #29	RASL11A (ENSECAG00000012858) #30	USP12 (ENSECAG00000006779) #31	ENSECAG00000045376	ENSECAG00000036907	GPR12 (ENSECAG00000059623) #32	WASF3 (ENSECAG00000000050) #33	CDK8 (ENSECAG00000015515) #34	RNF6 (ENSECAG00000013606) #35	SHISA2 (ENSECAG00000013207)
Atlantogenata	ANCESTRAL SPECIES	27	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049
Afrotheria	ANCESTRAL SPECIES	89		ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049	ENSGT00940000157443	ENSGT00940000157332
Afrotheria_a	ANCESTRAL SPECIES	90		ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.e.b.a.a.a ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00390000003643	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000165049	ENSGT00940000157443	ENSGT00940000157332
Hyrax	MODERN SPECIES	10395																CDX2 (ENSPCAG00000010752) #22
Elephant	MODERN SPECIES	294	UBAC2 (ENSLAFG00000007662)	TEX26 (ENSLAFG00000025765) #7	MEDAG (ENSLAFG00000018412) #8	ALOX5AP (ENSLAFG00000018481) #9	USPL1 (ENSLAFG00000007634) #10	HMGB1 (ENSLAFG00000000269) ##11	KATNAL1 (ENSLAFG00000003140) #12	UBL3 (ENSLAFG00000000781) #13	SLC7A1 (ENSLAFG00000016186) #14	ENSLAFG00000016168 #15	SLC46A3 (ENSLAFG00000009925) #16	POMP (ENSLAFG00000003665) #17	FLT1 (ENSLAFG00000015622) #18	PAN3 (ENSLAFG00000015614) #19	FLT3 (ENSLAFG00000015599) #20	CDX2 (ENSLAFG00000030146) #22	ENSLAFG00000022071	POLR1D (ENSLAFG00000032290) #26	LNX2 (ENSLAFG00000015044) #27	MTIF3 (ENSLAFG00000015496) #28	GTF3A (ENSLAFG00000027315) #29	RASL11A (ENSLAFG00000003673) #30	ENSLAFG00000003677	USP12 (ENSLAFG00000007202) #31	ENSLAFG00000028761	GPR12 (ENSLAFG00000014464) #32	WASF3 (ENSLAFG00000018395) #33	CDK8 (ENSLAFG00000006771) #34	RNF6 (ENSLAFG00000029161) #35	ENSLAFG00000030917	SHISA2 (ENSLAFG00000004541)
Tenrec	MODERN SPECIES	5796															URAD (ENSETEG00000018590)	CDX2 (ENSETEG00000018589) #22
Xenarthra	ANCESTRAL SPECIES	208											ENSGT00970000194118	ENSGT00940000164144	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00550000075160 #26	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33
Armadillo	MODERN SPECIES	1567									ENSDNOG00000031980	SLC46A3 (ENSDNOG00000000330) #16	ENSDNOG00000036523	ENSDNOG00000031252	PAN3 (ENSDNOG00000017391) #19	FLT3 (ENSDNOG00000001582) #20	ENSDNOG00000046210 #21	CDX2 (ENSDNOG00000035260) #22	PDX1 (ENSDNOG00000003213) #23	GSX1 (ENSDNOG00000011821) #24	ENSDNOG00000044869	ENSDNOG00000043676 #26	LNX2 (ENSDNOG00000006927) #27	MTIF3 (ENSDNOG00000037641) #28	ENSDNOG00000037405 #29	ENSDNOG00000041047	RASL11A (ENSDNOG00000010166) #30	ENSDNOG00000043479 #31	GPR12 (ENSDNOG00000017683) #32	WASF3 (ENSDNOG00000002618) #33
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.f ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00940000164144.g	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.m #35	ENSGT00940000157332	ENSGT00940000157443
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.f ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00940000164144.g	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.u #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.m #35	ENSGT00940000157332	ENSGT00940000157443
Diprotodontia	ANCESTRAL SPECIES	11	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.f ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00940000164144.g	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.u #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.m #35	ENSGT00940000157332	ENSGT00940000157443
Diprotodontia_a	ANCESTRAL SPECIES	9	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.f ##11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00940000164144.g	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00390000002395 #21	ENSGT00940000161261 #22	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.u #29	ENSGT00940000161208 #30	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530.m #35	ENSGT00940000157332	ENSGT00940000157443
koala	MODERN SPECIES	66	ALOX5AP (ENSPCIG00000019847) #9	USPL1 (ENSPCIG00000019844) #10	ENSPCIG00000021432 ##11	KATNAL1 (ENSPCIG00000021438) #12	UBL3 (ENSPCIG00000003332) #13	SLC7A1 (ENSPCIG00000003318) #14	MTUS2 (ENSPCIG00000003294) #15	SLC46A3 (ENSPCIG00000022153) #16	ENSPCIG00000022156 #17	ENSPCIG00000032952	ENSPCIG00000036587 #18	ENSPCIG00000022165	PAN3 (ENSPCIG00000022181) #19	FLT3 (ENSPCIG00000022190) #20	ENSPCIG00000022197 #21	CDX2 (ENSPCIG00000022200) #22	PDX1 (ENSPCIG00000022204) #23	GSX1 (ENSPCIG00000022205) #24	ENSPCIG00000022208	LNX2 (ENSPCIG00000022213) #27	MTIF3 (ENSPCIG00000022222) #28	GTF3A (ENSPCIG00000022226) #29	RASL11A (ENSPCIG00000031842) #30	RPL21 (ENSPCIG00000022238)	USP12 (ENSPCIG00000022249) #31	GPR12 (ENSPCIG00000023230) #32	WASF3 (ENSPCIG00000037264) #33	CDK8 (ENSPCIG00000017352) #34	RNF6 (ENSPCIG00000026870) #35	ATP8A2 (ENSPCIG00000036982)	SHISA2 (ENSPCIG00000025956)
Common wonbat	MODERN SPECIES	1049	ALOX5AP (ENSVURG00010020266) #9	ENSVURG00010020274 #10	ENSVURG00010020283 ##11	KATNAL1 (ENSVURG00010020293) #12	ENSVURG00010020303	UBL3 (ENSVURG00010020310) #13	SLC7A1 (ENSVURG00010020318) #14	ENSVURG00010020337 #15	ENSVURG00010020380	SLC46A3 (ENSVURG00010020388) #16	POMP (ENSVURG00010020395) #17	FLT1 (ENSVURG00010020423) #18	PAN3 (ENSVURG00010020471) #19	FLT3 (ENSVURG00010020490) #20	ENSVURG00010020509 #21	CDX2 (ENSVURG00010020516) #22	PDX1 (ENSVURG00010020518) #23	ENSVURG00010020522	GSX1 (ENSVURG00010020523) #24	ENSVURG00010020531	LNX2 (ENSVURG00010020536) #27	ENSVURG00010020547 #28	ENSVURG00010020554 #29	RASL11A (ENSVURG00010020566) #30	ENSVURG00010020571	ENSVURG00010020587 #31	WASF3 (ENSVURG00010020608) #33	CDK8 (ENSVURG00010020617) #34	RNF6 (ENSVURG00010020625) #35	ATP8A2 (ENSVURG00010020634)	SHISA2 (ENSVURG00010020652)
Wallaby	MODERN SPECIES	8945															ENSMEUG00000003394 #21	CDX2 (ENSMEUG00000003391) #22
Tasmanian devil	MODERN SPECIES	2	MEDAG (ENSSHAG00000027393) #8	ALOX5AP (ENSSHAG00000015184) #9	ENSSHAG00000014789 #10	ENSSHAG00000014034 ##11	KATNAL1 (ENSSHAG00000025350) #12	UBL3 (ENSSHAG00000026625) #13	SLC7A1 (ENSSHAG00000005902) #14	MTUS2 (ENSSHAG00000003528) #15	SLC46A3 (ENSSHAG00000018516) #16	POMP (ENSSHAG00000030814) #17	ENSSHAG00000018212 #18	ENSSHAG00000029371	PAN3 (ENSSHAG00000018065) #19	FLT3 (ENSSHAG00000017900) #20	ENSSHAG00000024737 #21	CDX2 (ENSSHAG00000017862) #22	ENSSHAG00000017812	GSX1 (ENSSHAG00000029989) #24	ENSSHAG00000025491	LNX2 (ENSSHAG00000017242) #27	ENSSHAG00000017006 #28	GTF3A (ENSSHAG00000016965) #29	RASL11A (ENSSHAG00000016468) #30	RPL21 (ENSSHAG00000000845)	USP12 (ENSSHAG00000016123) #31	GPR12 (ENSSHAG00000030631) #32	WASF3 (ENSSHAG00000013579) #33	CDK8 (ENSSHAG00000012149) #34	ENSSHAG00000011392 #35	ENSSHAG00000006347	ENSSHAG00000001962
Opossum	MODERN SPECIES	3	ALOX5AP (ENSMODG00000009265) #9	ENSMODG00000009262 #10	ENSMODG00000009238 ##11	ENSMODG00000048360	KATNAL1 (ENSMODG00000009220) #12	UBL3 (ENSMODG00000037463) #13	ENSMODG00000009203	SLC7A1 (ENSMODG00000009198) #14	MTUS2 (ENSMODG00000009167) #15	SLC46A3 (ENSMODG00000009152) #16	POMP (ENSMODG00000009139) #17	FLT1 (ENSMODG00000009128) #18	PAN3 (ENSMODG00000009065) #19	FLT3 (ENSMODG00000009045) #20	URAD (ENSMODG00000039216) #21	CDX2 (ENSMODG00000009021) #22	ENSMODG00000009015	GSX1 (ENSMODG00000009010) #24	ENSMODG00000047217	LNX2 (ENSMODG00000008989) #27	ENSMODG00000050662	ENSMODG00000008962 #28	GTF3A (ENSMODG00000008955) #29	RASL11A (ENSMODG00000008941) #30	RPL21 (ENSMODG00000008923)	ENSMODG00000008874 #31	WASF3 (ENSMODG00000008795) #33	CDK8 (ENSMODG00000008753) #34	RNF6 (ENSMODG00000038831) #35	ENSMODG00000028404	ENSMODG00000008684
Platypus	MODERN SPECIES	12	MEDAG (ENSOANG00000039210) #8	ALOX5AP (ENSOANG00000040345) #9	ENSOANG00000014720 #10	ENSOANG00000048910	ENSOANG00000014719 #11	KATNAL1 (ENSOANG00000014718) #12	UBL3 (ENSOANG00000039422) #13	SLC7A1 (ENSOANG00000041862) #14	ENSOANG00000048575 #15	SLC46A3 (ENSOANG00000015257) #16	POMP (ENSOANG00000050524) #17	FLT1 (ENSOANG00000009071) #18	PAN3 (ENSOANG00000009070) #19	ENSOANG00000045061 #20	ENSOANG00000009066 #21	ENSOANG00000043986 #22	ENSOANG00000009064	GSX1 (ENSOANG00000040381) #24	ENSOANG00000051147	LNX2 (ENSOANG00000009060) #27	ENSOANG00000009057 #28	GTF3A (ENSOANG00000038706) #29	RASL11A (ENSOANG00000009056) #30	ENSOANG00000009054	USP12 (ENSOANG00000009053) #31	GPR12 (ENSOANG00000009052) #32	WASF3 (ENSOANG00000009051) #33	CDK8 (ENSOANG00000009050) #34	ATP8A2 (ENSOANG00000009049)	ENSOANG00000009048	NUP58 (ENSOANG00000009047)
Sauria	ANCESTRAL SPECIES	2	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000178537	ENSGT00940000157332
Lepidosauria	ANCESTRAL SPECIES	17	ENSGT00940000159635	ENSGT00960000190702	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000162542 #23	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443	ENSGT00730000111111
Laterata	ANCESTRAL SPECIES	3	ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120.d #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443	ENSGT00730000111111
Common wall lizard	MODERN SPECIES	12	ALOX5AP (ENSPMRG00000002620) #9	USPL1 (ENSPMRG00000002600) #10	ENSPMRG00000004304	ENSPMRG00000004293 #11	KATNAL1 (ENSPMRG00000004274) #12	UBL3 (ENSPMRG00000004256) #13	SLC7A1 (ENSPMRG00000004229) #14	MTUS2 (ENSPMRG00000004195) #15	ENSPMRG00000004177	SLC46A3 (ENSPMRG00000004167) #16	ENSPMRG00000004155 #17	FLT1 (ENSPMRG00000004119) #18	ENSPMRG00000004109	PAN3 (ENSPMRG00000004057) #19	FLT3 (ENSPMRG00000004013) #20	CDX2 (ENSPMRG00000003971) #22	ENSPMRG00000003962	ENSPMRG00000003955	ENSPMRG00000003950	ENSPMRG00000003947	LNX2 (ENSPMRG00000003941) #27	MTIF3 (ENSPMRG00000003936) #28	GTF3A (ENSPMRG00000003933) #29	RASL11A (ENSPMRG00000003932) #30	ENSPMRG00000003922	USP12 (ENSPMRG00000003915) #31	GPR12 (ENSPMRG00000003909) #32	WASF3 (ENSPMRG00000003897) #33	CDK8 (ENSPMRG00000003886) #34	RNF6 (ENSPMRG00000003878) #35	ATP8A2 (ENSPMRG00000003832)
Argentine black and white tegu	MODERN SPECIES		ENSSMRG00000013098	ENSSMRG00000013101	MEDAG (ENSSMRG00000013102) #8	ALOX5AP (ENSSMRG00000013103) #9	USPL1 (ENSSMRG00000013104) #10	ENSSMRG00000013105 #11	KATNAL1 (ENSSMRG00000013106) #12	UBL3 (ENSSMRG00000013108) #13	SLC7A1 (ENSSMRG00000013111) #14	MTUS2 (ENSSMRG00000013112) #15	SLC46A3 (ENSSMRG00000013114) #16	POMP (ENSSMRG00000013115) #17	FLT1 (ENSSMRG00000013116) #18	PAN3 (ENSSMRG00000013117) #19	FLT3 (ENSSMRG00000013118) #20	CDX2 (ENSSMRG00000013119) #22	ENSSMRG00000013120	ENSSMRG00000013121	ENSSMRG00000013122	LNX2 (ENSSMRG00000013124) #27	MTIF3 (ENSSMRG00000013125) #28	GTF3A (ENSSMRG00000013126) #29	RASL11A (ENSSMRG00000013127) #30	USP12 (ENSSMRG00000013130) #31	WASF3 (ENSSMRG00000013132) #33	CDK8 (ENSSMRG00000013133) #34	ATP8A2 (ENSSMRG00000013134)	SHISA2 (ENSSMRG00000014778)	NUP58 (ENSSMRG00000014779)	MTMR6 (ENSSMRG00000014780)	AMER2 (ENSSMRG00000014782)
Toxicofera	DUPLICATION
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261.a #22	ENSGT00940000161261.b #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Elapidae	ANCESTRAL SPECIES	10	ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261.a #22	ENSGT00940000161261.b #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Indian cobra	MODERN SPECIES	4	MEDAG (ENSNNAG00000018277) #8	ALOX5AP (ENSNNAG00000018279) #9	USPL1 (ENSNNAG00000018281) #10	ENSNNAG00000018286 #11	KATNAL1 (ENSNNAG00000018289) #12	UBL3 (ENSNNAG00000018292) #13	SLC7A1 (ENSNNAG00000018294) #14	ENSNNAG00000018308 #15	SLC46A3 (ENSNNAG00000018349) #16	POMP (ENSNNAG00000018354) #17	FLT1 (ENSNNAG00000018362) #18	ENSNNAG00000018372	ENSNNAG00000018376	PAN3 (ENSNNAG00000018380) #19	FLT3 (ENSNNAG00000018383) #20	ENSNNAG00000018388 #22	ENSNNAG00000018390 #22	ENSNNAG00000018395	ENSNNAG00000018396	LNX2 (ENSNNAG00000018400) #27	ENSNNAG00000018403	GTF3A (ENSNNAG00000018407) #29	RASL11A (ENSNNAG00000018412) #30	RPL21 (ENSNNAG00000018417)	USP12 (ENSNNAG00000018426) #31	GPR12 (ENSNNAG00000018437) #32	WASF3 (ENSNNAG00000018442) #33	CDK8 (ENSNNAG00000018452) #34	RNF6 (ENSNNAG00000018464) #35	ATP8A2 (ENSNNAG00000003171)	SHISA2 (ENSNNAG00000003374)
Elapidae_a	ANCESTRAL SPECIES	12	ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261.a #22	ENSGT00940000161261.b #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443	ENSGT00730000111111
Blue-lipped sea krait	MODERN SPECIES	4174																CDX2 (ENSLLTG00000007948) #22
Acanthophiinae	ANCESTRAL SPECIES	14	ENSGT00940000159635	ENSGT00940000162967	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261.a #22	ENSGT00940000161261.b #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443	ENSGT00730000111111
Eastern brown snake	DUPLICATION
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	603																ENSPTXG00000014429 #22
Eastern brown snake	MODERN SPECIES	605																ENSPTXG00000014432 #22
Eastern brown snake	MODERN SPECIES	604																ENSPTXG00000014430 #22
Mainland tiger snake	MODERN SPECIES	68	ENSNSUG00000012844	MEDAG (ENSNSUG00000012845) #8	ALOX5AP (ENSNSUG00000012858) #9	USPL1 (ENSNSUG00000012859) #10	ENSNSUG00000012860 #11	KATNAL1 (ENSNSUG00000012862) #12	UBL3 (ENSNSUG00000012927) #13	SLC7A1 (ENSNSUG00000012928) #14	MTUS2 (ENSNSUG00000012929) #15	SLC46A3 (ENSNSUG00000012951) #16	POMP (ENSNSUG00000012952) #17	FLT1 (ENSNSUG00000012953) #18	ENSNSUG00000012954	PAN3 (ENSNSUG00000012955) #19	FLT3 (ENSNSUG00000013286) #20	CDX2 (ENSNSUG00000013289) #22	ENSNSUG00000013330	ENSNSUG00000013331	LNX2 (ENSNSUG00000013336) #27	GTF3A (ENSNSUG00000013369) #29	MTIF3 (ENSNSUG00000013371) #28	RPL21 (ENSNSUG00000013372)	USP12 (ENSNSUG00000013375) #31	GPR12 (ENSNSUG00000013376) #32	WASF3 (ENSNSUG00000013377) #33	CDK8 (ENSNSUG00000013378) #34	RNF6 (ENSNSUG00000013389) #35	ATP8A2 (ENSNSUG00000013390)	SHISA2 (ENSNSUG00000013391)	NUP58 (ENSNSUG00000013392)	MTMR6 (ENSNSUG00000013393)
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261.a #22	ENSGT00940000161261.b #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443	ENSGT00730000111111
Elapidae	ANCESTRAL SPECIES	10	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261.a #22	ENSGT00940000161261.b #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443	ENSGT00730000111111
Elapidae_a	ANCESTRAL SPECIES	12	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261.a #22	ENSGT00940000161261.b #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443	ENSGT00730000111111	ENSGT00940000158055
Acanthophiinae	ANCESTRAL SPECIES	14	ENSGT00940000162967	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261.a #22	ENSGT00940000161261.b #22	ENSGT00940000163955	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443	ENSGT00730000111111	ENSGT00940000158055
Eastern brown snake	MODERN SPECIES	41	HSPH1 (ENSPTXG00000005358)	ENSPTXG00000005354	MEDAG (ENSPTXG00000005353) #8	ALOX5AP (ENSPTXG00000005352) #9	USPL1 (ENSPTXG00000005351) #10	ENSPTXG00000005350 #11	KATNAL1 (ENSPTXG00000005349) #12	UBL3 (ENSPTXG00000005348) #13	SLC7A1 (ENSPTXG00000005347) #14	MTUS2 (ENSPTXG00000005346) #15	SLC46A3 (ENSPTXG00000005345) #16	POMP (ENSPTXG00000005344) #17	FLT1 (ENSPTXG00000005343) #18	PAN3 (ENSPTXG00000005342) #19	FLT3 (ENSPTXG00000005341) #20	ENSPTXG00000005340 #22	ENSPTXG00000005339	ENSPTXG00000005338	ENSPTXG00000005337	LNX2 (ENSPTXG00000005336) #27	MTIF3 (ENSPTXG00000005335) #28	GTF3A (ENSPTXG00000005334) #29	RPL21 (ENSPTXG00000005331)	USP12 (ENSPTXG00000005330) #31	GPR12 (ENSPTXG00000005329) #32	WASF3 (ENSPTXG00000005326) #33	CDK8 (ENSPTXG00000005324) #34	RNF6 (ENSPTXG00000005321) #35	ATP8A2 (ENSPTXG00000005319)	SHISA2 (ENSPTXG00000005318)	NUP58 (ENSPTXG00000005317)
Indian cobra	MODERN SPECIES	4	ALOX5AP (ENSNNAG00000018279) #9	USPL1 (ENSNNAG00000018281) #10	ENSNNAG00000018286 #11	KATNAL1 (ENSNNAG00000018289) #12	UBL3 (ENSNNAG00000018292) #13	SLC7A1 (ENSNNAG00000018294) #14	ENSNNAG00000018308 #15	SLC46A3 (ENSNNAG00000018349) #16	POMP (ENSNNAG00000018354) #17	FLT1 (ENSNNAG00000018362) #18	ENSNNAG00000018372	ENSNNAG00000018376	PAN3 (ENSNNAG00000018380) #19	FLT3 (ENSNNAG00000018383) #20	ENSNNAG00000018388 #22	ENSNNAG00000018390 #22	ENSNNAG00000018395	ENSNNAG00000018396	LNX2 (ENSNNAG00000018400) #27	ENSNNAG00000018403	GTF3A (ENSNNAG00000018407) #29	RASL11A (ENSNNAG00000018412) #30	RPL21 (ENSNNAG00000018417)	USP12 (ENSNNAG00000018426) #31	GPR12 (ENSNNAG00000018437) #32	WASF3 (ENSNNAG00000018442) #33	CDK8 (ENSNNAG00000018452) #34	RNF6 (ENSNNAG00000018464) #35	ATP8A2 (ENSNNAG00000003171)	SHISA2 (ENSNNAG00000003374)	NUP58 (ENSNNAG00000003403)
Lizard	MODERN SPECIES	920																CDX2 (ENSACAG00000003334) #22	pdx1 (ENSACAG00000040382)	ENSACAG00000038393	ENSACAG00000029692	ENSACAG00000037102	LNX2 (ENSACAG00000003256) #27	MTIF3 (ENSACAG00000003250) #28	GTF3A (ENSACAG00000003216) #29	RASL11A (ENSACAG00000045270) #30	RPL21 (ENSACAG00000003169)	USP12 (ENSACAG00000003130) #31	ENSACAG00000043765	ENSACAG00000003127 #32	ENSACAG00000045351	WASF3 (ENSACAG00000003083) #33	ENSACAG00000003031 #34
tuatara	MODERN SPECIES	1117				ENSSPUG00000004469 #11	KATNAL1 (ENSSPUG00000004497) #12	UBL3 (ENSSPUG00000004602) #13	ENSSPUG00000004612	SLC7A1 (ENSSPUG00000004618) #14	ENSSPUG00000004651 #15	SLC46A3 (ENSSPUG00000004676) #16	ENSSPUG00000004689	POMP (ENSSPUG00000004693) #17	FLT1 (ENSSPUG00000004702) #18	PAN3 (ENSSPUG00000004768) #19	FLT3 (ENSSPUG00000004920) #20	CDX2 (ENSSPUG00000005058) #22	PDX1 (ENSSPUG00000005068) #23	GSX1 (ENSSPUG00000005080) #24	ENSSPUG00000005085	LNX2 (ENSSPUG00000005112) #27	MTIF3 (ENSSPUG00000005295) #28	GTF3A (ENSSPUG00000005307) #29	RASL11A (ENSSPUG00000005315) #30	RPL21 (ENSSPUG00000005343)	ENSSPUG00000005393	ENSSPUG00000005404 #31	ENSSPUG00000005419 #31
Archelosauria	ANCESTRAL SPECIES		ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000178537	ENSGT00940000157332
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000178537	ENSGT00940000157332	ENSGT00940000157443
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a.ob.b #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Emydidae	ANCESTRAL SPECIES	19	ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a.ob.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	66	ENSTMTG00000017322	ENSTMTG00000017306 #8	ENSTMTG00000017295 #9	ENSTMTG00000017281 #10	ENSTMTG00000017266 #11	ENSTMTG00000017086 #12	ENSTMTG00000017063 #13	ENSTMTG00000017059	ENSTMTG00000017052 #14	ENSTMTG00000017027 #15	ENSTMTG00000017009 #16	ENSTMTG00000016991 #17	ENSTMTG00000016099 #18	ENSTMTG00000015220 #19	ENSTMTG00000015105 #20	ENSTMTG00000015025 #22	ENSTMTG00000015011	ENSTMTG00000014999 #24	ENSTMTG00000014992	ENSTMTG00000014981 #27	ENSTMTG00000014974 #28	ENSTMTG00000014959 #29	ENSTMTG00000014944 #30	ENSTMTG00000014924	ENSTMTG00000014879 #31	ENSTMTG00000014868 #32	ENSTMTG00000014850 #33	ENSTMTG00000014812 #34	ENSTMTG00000014793 #35	ENSTMTG00000014679	ENSTMTG00000014650
Three-toed box turtle	MODERN SPECIES	67	ENSTMTG00000006703	TEX26 (ENSTMTG00000006652) #7	ENSTMTG00000006577 #8	ENSTMTG00000006555 #9	ENSTMTG00000006543 #10	ENSTMTG00000006532 #11	ENSTMTG00000006340 #12	ENSTMTG00000006312 #13	ENSTMTG00000006264 #14	ENSTMTG00000006174 #15	ENSTMTG00000006140 #16	ENSTMTG00000006119 #17	ENSTMTG00000005491 #18	ENSTMTG00000005429 #19	ENSTMTG00000005366 #20	ENSTMTG00000005305 #22	ENSTMTG00000005297	ENSTMTG00000005288 #24	ENSTMTG00000005273	ENSTMTG00000005258 #27	ENSTMTG00000005240 #28	ENSTMTG00000005188 #29	ENSTMTG00000005157 #30	ENSTMTG00000005134	ENSTMTG00000005117 #31	ENSTMTG00000005108 #32	ENSTMTG00000005088 #33	ENSTMTG00000005003 #34	ENSTMTG00000004982 #35	ENSTMTG00000004825	ENSTMTG00000004798
painted turtle	MODERN SPECIES		ENSCPBG00000020420	TEX26 (ENSCPBG00000020423) #7	MEDAG (ENSCPBG00000020425) #8	ALOX5AP (ENSCPBG00000020426) #9	USPL1 (ENSCPBG00000020428) #10	ENSCPBG00000020432 #11	KATNAL1 (ENSCPBG00000020433) #12	UBL3 (ENSCPBG00000020434) #13	SLC7A1 (ENSCPBG00000020435) #14	ENSCPBG00000020439 #15	SLC46A3 (ENSCPBG00000020446) #16	POMP (ENSCPBG00000020448) #17	FLT1 (ENSCPBG00000020453) #18	PAN3 (ENSCPBG00000020461) #19	FLT3 (ENSCPBG00000020464) #20	CDX2 (ENSCPBG00000020467) #22	ENSCPBG00000020468	GSX1 (ENSCPBG00000020469) #24	ENSCPBG00000020470	LNX2 (ENSCPBG00000020474) #27	MTIF3 (ENSCPBG00000020476) #28	GTF3A (ENSCPBG00000020478) #29	RASL11A (ENSCPBG00000020480) #30	ENSCPBG00000020481	USP12 (ENSCPBG00000020485) #31	GPR12 (ENSCPBG00000020487) #32	WASF3 (ENSCPBG00000020488) #33	ENSCPBG00000020495 #34	RNF6 (ENSCPBG00000020502) #35	ATP8A2 (ENSCPBG00000020518)	SHISA2 (ENSCPBG00000020540)
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000162967	ENSGT00390000009484 #7	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00960000191986	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a.ob.b #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000178537
Abingdon island giant tortoise	MODERN SPECIES	2506									MTUS2 (ENSCABG00000001449) #15	SLC46A3 (ENSCABG00000001447) #16	POMP (ENSCABG00000001444) #17	ENSCABG00000001441	FLT1 (ENSCABG00000001419) #18	PAN3 (ENSCABG00000001412) #19	FLT3 (ENSCABG00000001407) #20	CDX2 (ENSCABG00000001373) #22	ENSCABG00000001367	GSX1 (ENSCABG00000001364) #24	ENSCABG00000001360	LNX2 (ENSCABG00000001232) #27	MTIF3 (ENSCABG00000001226) #28	ENSCABG00000001221 #29	ENSCABG00000001216 #29	ENSCABG00000001212	RASL11A (ENSCABG00000001207) #30	RPL21 (ENSCABG00000001202)	ENSCABG00000001199	USP12 (ENSCABG00000000741) #31	GPR12 (ENSCABG00000000730) #32	WASF3 (ENSCABG00000000727) #33	CDK8 (ENSCABG00000000659) #34
Goode s thornscrub tortoise	MODERN SPECIES		HSPH1 (ENSGEVG00005001710)	ENSGEVG00005001666	TEX26 (ENSGEVG00005001648) #7	ALOX5AP (ENSGEVG00005001628) #9	USPL1 (ENSGEVG00005001581) #10	ENSGEVG00005001495 #11	KATNAL1 (ENSGEVG00005001464) #12	UBL3 (ENSGEVG00005001443) #13	SLC7A1 (ENSGEVG00005001419) #14	ENSGEVG00005001400 #15	SLC46A3 (ENSGEVG00005001382) #16	POMP (ENSGEVG00005001361) #17	FLT1 (ENSGEVG00005001326) #18	PAN3 (ENSGEVG00005001290) #19	FLT3 (ENSGEVG00005001236) #20	CDX2 (ENSGEVG00005001187) #22	ENSGEVG00005001158	GSX1 (ENSGEVG00005001138) #24	ENSGEVG00005001122	LNX2 (ENSGEVG00005001093) #27	MTIF3 (ENSGEVG00005001075) #28	GTF3A (ENSGEVG00005001061) #29	ENSGEVG00005001047	RASL11A (ENSGEVG00005001037) #30	RPL21 (ENSGEVG00005001010)	USP12 (ENSGEVG00005000973) #31	GPR12 (ENSGEVG00005000941) #32	WASF3 (ENSGEVG00005000927) #33	CDK8 (ENSGEVG00005000884) #34	RNF6 (ENSGEVG00005000853) #35	ENSGEVG00005000842
Chinese turtle	MODERN SPECIES	2233											SLC46A3 (ENSPSIG00000014278) #16	POMP (ENSPSIG00000014079) #17	FLT1 (ENSPSIG00000012931) #18	PAN3 (ENSPSIG00000012768) #19	FLT3 (ENSPSIG00000012352) #20	CDX2 (ENSPSIG00000012291) #22	ENSPSIG00000012283	ENSPSIG00000011964	LNX2 (ENSPSIG00000011733) #27	MTIF3 (ENSPSIG00000011725) #28	GTF3A (ENSPSIG00000011722) #29	RASL11A (ENSPSIG00000011613) #30	RPL21 (ENSPSIG00000011259)	USP12 (ENSPSIG00000010921) #31	ENSPSIG00000010914	GPR12 (ENSPSIG00000001794) #32	WASF3 (ENSPSIG00000010814) #33	CDK8 (ENSPSIG00000010808) #34	RNF6 (ENSPSIG00000010388) #35	ATP8A2 (ENSPSIG00000009377)	ENSPSIG00000009334
Archosauria	ANCESTRAL SPECIES	2	ENSGT00960000190702	ENSGT00390000018451 #8	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Aves	ANCESTRAL SPECIES		ENSGT00940000159635	ENSGT00940000162967	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Neognathae	ANCESTRAL SPECIES	1	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Anatidae	ANCESTRAL SPECIES	16	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Duck	MODERN SPECIES		RXFP2 (ENSAPLG00000006226)	B3GLCT (ENSAPLG00000006024)	HSPH1 (ENSAPLG00000005104)	ALOX5AP (ENSAPLG00000004149) #9	USPL1 (ENSAPLG00000003991) #10	ENSAPLG00000030014 #11	KATNAL1 (ENSAPLG00000003805) #12	UBL3 (ENSAPLG00000020134) #13	SLC7A1 (ENSAPLG00000008545) #14	MTUS2 (ENSAPLG00000008305) #15	SLC46A3 (ENSAPLG00000008223) #16	POMP (ENSAPLG00000008213) #17	FLT1 (ENSAPLG00000006689) #18	PAN3 (ENSAPLG00000006496) #19	FLT3 (ENSAPLG00000005989) #20	CDX2 (ENSAPLG00000020255) #22	ENSAPLG00000026245	GSX1 (ENSAPLG00000024317) #24	ENSAPLG00000005977	LNX2 (ENSAPLG00000005445) #27	MTIF3 (ENSAPLG00000006117) #28	ENSAPLG00000005957 #29	RASL11A (ENSAPLG00000017444) #30	RPL21 (ENSAPLG00000005641)	USP12 (ENSAPLG00000005359) #31	GPR12 (ENSAPLG00000001069) #32	WASF3 (ENSAPLG00000005025) #33	CDK8 (ENSAPLG00000009252) #34	RNF6 (ENSAPLG00000009544) #35	ATP8A2 (ENSAPLG00000009563)	SHISA2 (ENSAPLG00000026795)
Pink-footed goose	MODERN SPECIES	66	RXFP2 (ENSABRG00000020009)	B3GLCT (ENSABRG00000020013)	HSPH1 (ENSABRG00000020015)	ALOX5AP (ENSABRG00000020028) #9	USPL1 (ENSABRG00000020031) #10	ENSABRG00000020036 #11	KATNAL1 (ENSABRG00000020047) #12	UBL3 (ENSABRG00000020066) #13	SLC7A1 (ENSABRG00000020071) #14	MTUS2 (ENSABRG00000020080) #15	SLC46A3 (ENSABRG00000020099) #16	POMP (ENSABRG00000020108) #17	FLT1 (ENSABRG00000020130) #18	PAN3 (ENSABRG00000020145) #19	FLT3 (ENSABRG00000020154) #20	CDX2 (ENSABRG00000020167) #22	ENSABRG00000020168	GSX1 (ENSABRG00000020173) #24	ENSABRG00000020175	LNX2 (ENSABRG00000020178) #27	MTIF3 (ENSABRG00000020183) #28	GTF3A (ENSABRG00000020186) #29	RASL11A (ENSABRG00000020194) #30	RPL21 (ENSABRG00000020198)	USP12 (ENSABRG00000020207) #31	GPR12 (ENSABRG00000020211) #32	WASF3 (ENSABRG00000020213) #33	CDK8 (ENSABRG00000020224) #34	RNF6 (ENSABRG00000020261) #35	ATP8A2 (ENSABRG00000020282)	SHISA2 (ENSABRG00000020328)
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000155499	ENSGT00940000159635.q	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00910000147887	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643.a	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Japanese quail	MODERN SPECIES		B3GLCT (ENSCJPG00005020417)	HSPH1 (ENSCJPG00005020418)	ALOX5AP (ENSCJPG00005020419) #9	USPL1 (ENSCJPG00005020420) #10	ENSCJPG00005020423 #11	KATNAL1 (ENSCJPG00005020425) #12	UBL3 (ENSCJPG00005020426) #13	SLC7A1 (ENSCJPG00005020427) #14	MTUS2 (ENSCJPG00005020428) #15	SLC46A3 (ENSCJPG00005020429) #16	POMP (ENSCJPG00005020430) #17	FLT1 (ENSCJPG00005020431) #18	ENSCJPG00005020432	PAN3 (ENSCJPG00005020433) #19	FLT3 (ENSCJPG00005020434) #20	CDX2 (ENSCJPG00005020437) #22	ENSCJPG00005020438	GSX1 (ENSCJPG00005020440) #24	ENSCJPG00005020444	LNX2 (ENSCJPG00005020445) #27	MTIF3 (ENSCJPG00005020447) #28	GTF3A (ENSCJPG00005020448) #29	RASL11A (ENSCJPG00005020451) #30	RPL21 (ENSCJPG00005000787)	USP12 (ENSCJPG00005000797) #31	GPR12 (ENSCJPG00005000813) #32	WASF3 (ENSCJPG00005000831) #33	CDK8 (ENSCJPG00005000850) #34	RNF6 (ENSCJPG00005000859) #35	ATP8A2 (ENSCJPG00005000945)	SHISA2 (ENSCJPG00005001121)
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00610000086058.b	ENSGT00940000155499	ENSGT00940000159635.q	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643.a	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Turkey	MODERN SPECIES		ENSMGAG00000015604	ENSMGAG00000015110	ENSMGAG00000015109 #35	ENSMGAG00000015108 #34	ENSMGAG00000021988 #34	ENSMGAG00000015597 #32	ENSMGAG00000015107 #33	USP12 (ENSMGAG00000015106) #31	ENSMGAG00000015105	ENSMGAG00000019583 #30	ENSMGAG00000015101 #28	ENSMGAG00000015102 #29	LNX2 (ENSMGAG00000015103) #27	ENSMGAG00000019450	ENSMGAG00000021200	ENSMGAG00000018257 #22	ENSMGAG00000015097 #20	ENSMGAG00000015096 #19	ENSMGAG00000015095	ENSMGAG00000018803 #18	ENSMGAG00000015093 #16	ENSMGAG00000015094 #17	ENSMGAG00000015091 #15	ENSMGAG00000015090 #14	ENSMGAG00000007304 #15	UBL3 (ENSMGAG00000020600) #13	ENSMGAG00000015088 #12	ENSMGAG00000015087 #11	ENSMGAG00000015085 #9	ENSMGAG00000015086 #10	ENSMGAG00000015083
Chicken	MODERN SPECIES		FRY (ENSGALG00010006835)	B3GLCT (ENSGALG00010006903)	HSPH1 (ENSGALG00010006913)	ALOX5AP (ENSGALG00010006942) #9	USPL1 (ENSGALG00010006988) #10	HMGB1 (ENSGALG00010007011) #11	KATNAL1 (ENSGALG00010007028) #12	UBL3 (ENSGALG00010007070) #13	SLC7A1 (ENSGALG00010007106) #14	ENSGALG00010007162 #15	SLC46A3 (ENSGALG00010005042) #16	POMP (ENSGALG00010005060) #17	FLT1 (ENSGALG00010005282) #18	PAN3 (ENSGALG00010005296) #19	FLT3 (ENSGALG00010004758) #20	CDX2 (ENSGALG00010004589) #22	ENSGALG00010004598	GSX1 (ENSGALG00010004613) #24	ENSGALG00010005082	LNX2 (ENSGALG00010005132) #27	MTIF3 (ENSGALG00010005123) #28	GTF3A (ENSGALG00010005143) #29	RASL11A (ENSGALG00010005784) #30	RPL21 (ENSGALG00010005785)	USP12 (ENSGALG00010005830) #31	GPR12 (ENSGALG00010005843) #32	WASF3 (ENSGALG00010005848) #33	CDK8 (ENSGALG00010005875) #34	RNF6 (ENSGALG00010005891) #35	ATP8A2 (ENSGALG00010005935)	SHISA2 (ENSGALG00010005970)
Neognathae_b	ANCESTRAL SPECIES		ENSGT00610000086058.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00610000086058.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647 #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Golden eagle	MODERN SPECIES	10	B3GLCT (ENSACCG00020015407)	HSPH1 (ENSACCG00020015450)	ENSACCG00020015479	ALOX5AP (ENSACCG00020015490) #9	USPL1 (ENSACCG00020015509) #10	ENSACCG00020015526 #11	KATNAL1 (ENSACCG00020015538) #12	UBL3 (ENSACCG00020015554) #13	SLC7A1 (ENSACCG00020015572) #14	MTUS2 (ENSACCG00020015600) #15	SLC46A3 (ENSACCG00020015624) #16	POMP (ENSACCG00020015647) #17	FLT1 (ENSACCG00020015689) #18	PAN3 (ENSACCG00020015728) #19	FLT3 (ENSACCG00020015779) #20	CDX2 (ENSACCG00020015840) #22	ENSACCG00020015849	GSX1 (ENSACCG00020015856) #24	ENSACCG00020015871	LNX2 (ENSACCG00020015880) #27	MTIF3 (ENSACCG00020015893) #28	GTF3A (ENSACCG00020015904) #29	RASL11A (ENSACCG00020015924) #30	RPL21 (ENSACCG00020015935)	USP12 (ENSACCG00020015953) #31	GPR12 (ENSACCG00020015967) #32	WASF3 (ENSACCG00020015986) #33	CDK8 (ENSACCG00020016007) #34	ENSACCG00020016028 #35	ATP8A2 (ENSACCG00020016509)	SHISA2 (ENSACCG00020016760)
Kakapo	MODERN SPECIES	11	FRY (ENSSHBG00005014192)	B3GLCT (ENSSHBG00005014739)	HSPH1 (ENSSHBG00005015715)	ALOX5AP (ENSSHBG00005015727) #9	USPL1 (ENSSHBG00005015735) #10	ENSSHBG00005015756 #11	KATNAL1 (ENSSHBG00005015762) #12	UBL3 (ENSSHBG00005015767) #13	SLC7A1 (ENSSHBG00005015784) #14	MTUS2 (ENSSHBG00005015801) #15	SLC46A3 (ENSSHBG00005009851) #16	POMP (ENSSHBG00005009882) #17	FLT1 (ENSSHBG00005009961) #18	PAN3 (ENSSHBG00005010335) #19	FLT3 (ENSSHBG00005013018) #20	CDX2 (ENSSHBG00005013047) #22	ENSSHBG00005013057	GSX1 (ENSSHBG00005013067) #24	ENSSHBG00005013073	LNX2 (ENSSHBG00005013084) #27	MTIF3 (ENSSHBG00005013103) #28	GTF3A (ENSSHBG00005013114) #29	RASL11A (ENSSHBG00005013133) #30	RPL21 (ENSSHBG00005013149)	ENSSHBG00005013174 #31	ENSSHBG00005013185 #31	GPR12 (ENSSHBG00005013192) #32	WASF3 (ENSSHBG00005013203) #33	CDK8 (ENSSHBG00005013211) #34	RNF6 (ENSSHBG00005013216) #35	ATP8A2 (ENSSHBG00005013242)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00610000086058.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.x.a #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Great tit	MODERN SPECIES		FRY (ENSPMJG00000015047)	B3GLCT (ENSPMJG00000017445)	HSPH1 (ENSPMJG00000017446)	ALOX5AP (ENSPMJG00000017448) #9	USPL1 (ENSPMJG00000017450) #10	ENSPMJG00000017453 #11	KATNAL1 (ENSPMJG00000017454) #12	UBL3 (ENSPMJG00000017458) #13	SLC7A1 (ENSPMJG00000017459) #14	MTUS2 (ENSPMJG00000017469) #15	SLC46A3 (ENSPMJG00000017471) #16	POMP (ENSPMJG00000017472) #17	FLT1 (ENSPMJG00000017473) #18	PAN3 (ENSPMJG00000017474) #19	FLT3 (ENSPMJG00000017475) #20	CDX2 (ENSPMJG00000017476) #22	ENSPMJG00000017477	GSX1 (ENSPMJG00000017478) #24	ENSPMJG00000017479	LNX2 (ENSPMJG00000017480) #27	ENSPMJG00000017481 #28	GTF3A (ENSPMJG00000017482) #29	RASL11A (ENSPMJG00000017485) #30	RPL21 (ENSPMJG00000017486)	USP12 (ENSPMJG00000017489) #31	GPR12 (ENSPMJG00000017490) #32	WASF3 (ENSPMJG00000017491) #33	ENSPMJG00000017492 #34	RNF6 (ENSPMJG00000017493) #35	ATP8A2 (ENSPMJG00000017494)	SHISA2 (ENSPMJG00000017495)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00610000086058.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.x.a #29	ENSGT00940000155647.w #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332
Flycatcher	MODERN SPECIES		B3GLCT (ENSFALG00000008485)	HSPH1 (ENSFALG00000008492)	ALOX5AP (ENSFALG00000008494) #9	USPL1 (ENSFALG00000008499) #10	ENSFALG00000008507 #11	KATNAL1 (ENSFALG00000008512) #12	UBL3 (ENSFALG00000008516) #13	SLC7A1 (ENSFALG00000008521) #14	MTUS2 (ENSFALG00000008535) #15	SLC46A3 (ENSFALG00000008538) #16	POMP (ENSFALG00000008541) #17	FLT1 (ENSFALG00000008542) #18	PAN3 (ENSFALG00000008554) #19	FLT3 (ENSFALG00000008570) #20	ENSFALG00000025892	CDX2 (ENSFALG00000014799) #22	ENSFALG00000008588	GSX1 (ENSFALG00000028458) #24	ENSFALG00000023517	LNX2 (ENSFALG00000008604) #27	MTIF3 (ENSFALG00000008612) #28	ENSFALG00000025967 #29	ENSFALG00000008614 #29	RASL11A (ENSFALG00000025266) #30	RPL21 (ENSFALG00000027093)	USP12 (ENSFALG00000008645) #31	WASF3 (ENSFALG00000008659) #33	RNF6 (ENSFALG00000008663) #35	ENSFALG00000008667	NUP58 (ENSFALG00000008681)	ENSFALG00000014826
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00610000086058.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.w #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00610000086058.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000158706 #9	ENSGT00390000002316 #10	ENSGT00950000183120 #11	ENSGT00940000156630 #12	ENSGT00390000004952.b #13	ENSGT00940000155349 #14	ENSGT00950000183026.B #15	ENSGT00950000183096.a.a.c.b #16	ENSGT00390000010734 #17	ENSGT00940000158713 #18	ENSGT00390000001504 #19	ENSGT00940000160575 #20	ENSGT00940000161261 #22	ENSGT00940000163955	ENSGT00940000154361.A #24	ENSGT00390000003643	ENSGT00940000158381 #27	ENSGT00390000014424 #28	ENSGT00940000155647.w #29	ENSGT00940000161208 #30	ENSGT00950000182922.b	ENSGT00940000153284.a #31	ENSGT01060000248564.b.a.b.a #32	ENSGT00950000182962.a.a #33	ENSGT00940000157104 #34	ENSGT00940000158530 #35	ENSGT00940000157332	ENSGT00940000157443
Common canary	MODERN SPECIES	4	B3GLCT (ENSSCAG00000008506)	HSPH1 (ENSSCAG00000006925)	ALOX5AP (ENSSCAG00000006720) #9	USPL1 (ENSSCAG00000006715) #10	ENSSCAG00000006705 #11	KATNAL1 (ENSSCAG00000006695) #12	UBL3 (ENSSCAG00000006691) #13	SLC7A1 (ENSSCAG00000006665) #14	MTUS2 (ENSSCAG00000006627) #15	ENSSCAG00000006607	SLC46A3 (ENSSCAG00000006605) #16	POMP (ENSSCAG00000006603) #17	FLT1 (ENSSCAG00000006594) #18	PAN3 (ENSSCAG00000006588) #19	FLT3 (ENSSCAG00000006561) #20	CDX2 (ENSSCAG00000006556) #22	ENSSCAG00000006555	GSX1 (ENSSCAG00000006551) #24	ENSSCAG00000006550	LNX2 (ENSSCAG00000006544) #27	MTIF3 (ENSSCAG00000006540) #28	GTF3A (ENSSCAG00000006534) #29	RASL11A (ENSSCAG00000006526) #30	RPL21 (ENSSCAG00000006515)	USP12 (ENSSCAG00000006508) #31	GPR12 (ENSSCAG00000006491) #32	WASF3 (ENSSCAG00000006489) #33	CDK8 (ENSSCAG00000006481) #34	RNF6 (ENSSCAG00000006466) #35	ATP8A2 (ENSSCAG00000006152)	SHISA2 (ENSSCAG00000006063)
Zebra finch	MODERN SPECIES		FRY (ENSTGUG00000011735)	B3GLCT (ENSTGUG00000011725)	HSPH1 (ENSTGUG00000011712)	ALOX5AP (ENSTGUG00000011710) #9	USPL1 (ENSTGUG00000011708) #10	HMGB1 (ENSTGUG00000022860) #11	KATNAL1 (ENSTGUG00000011690) #12	UBL3 (ENSTGUG00000023373) #13	SLC7A1 (ENSTGUG00000011671) #14	MTUS2 (ENSTGUG00000011664) #15	SLC46A3 (ENSTGUG00000011660) #16	POMP (ENSTGUG00000019231) #17	FLT1 (ENSTGUG00000011631) #18	PAN3 (ENSTGUG00000011627) #19	FLT3 (ENSTGUG00000011607) #20	CDX2 (ENSTGUG00000024715) #22	ENSTGUG00000011604	GSX1 (ENSTGUG00000011603) #24	ENSTGUG00000026413	LNX2 (ENSTGUG00000011590) #27	MTIF3 (ENSTGUG00000011587) #28	GTF3A (ENSTGUG00000011584) #29	RASL11A (ENSTGUG00000011581) #30	RPL21 (ENSTGUG00000011571)	USP12 (ENSTGUG00000011564) #31	GPR12 (ENSTGUG00000029743) #32	WASF3 (ENSTGUG00000011551) #33	CDK8 (ENSTGUG00000011534) #34	RNF6 (ENSTGUG00000011529) #35	ATP8A2 (ENSTGUG00000011487)	SHISA2 (ENSTGUG00000023421)