Murinae	ANCESTRAL SPECIES	2	ENSGT00390000015471 #8	ENSGT00390000007658 #9	ENSGT00390000010922 #10	ENSGT00510000049371 #11	ENSGT00940000161775 #12	ENSGT00530000063681.b.b #13	ENSGT00940000156460.C #14	ENSGT00950000183049.B #15	ENSGT00390000000867 #16	ENSGT00920000149170 #17	ENSGT00940000158291	ENSGT00390000014384 #18	ENSGT00390000008279.a #19	ENSGT00390000008557 #20	ENSGT00390000002727 #21	ENSGT00390000012620 #22	ENSGT00940000154482.b.a #23	ENSGT00390000010157.a #24	ENSGT00390000014590 #25	ENSGT00940000159218.b #26	ENSGT00940000161912 #27	ENSGT00940000154819.a.a #28	ENSGT00390000003156.a.a #29	ENSGT00390000001523 #30	ENSGT01060000248556.B.t #31	ENSGT00940000156073 #32	ENSGT00940000160740 #33	ENSGT00940000154327.b.e.a #34	ENSGT00940000158798 #35	ENSGT00530000063187.B.b #36	ENSGT00530000063187.B.a #37
Mus	ANCESTRAL SPECIES	3	ENSGT00390000015471 #8	ENSGT00390000007658 #9	ENSGT00390000010922 #10	ENSGT00510000049371 #11	ENSGT00940000161775 #12	ENSGT00530000063681.b.b #13	ENSGT00940000156460.C #14	ENSGT00950000183049.B #15	ENSGT00390000000867 #16	ENSGT00920000149170 #17	ENSGT00940000158291	ENSGT00390000014384 #18	ENSGT00390000008279.a #19	ENSGT00390000008557 #20	ENSGT00390000002727 #21	ENSGT00390000012620 #22	ENSGT00940000154482.b.a #23	ENSGT00390000010157.a #24	ENSGT00390000014590 #25	ENSGT00940000159218.b #26	ENSGT00940000161912 #27	ENSGT00940000154819.a.a #28	ENSGT00390000003156.a.a #29	ENSGT00390000001523 #30	ENSGT01060000248556.B.t #31	ENSGT00940000156073 #32	ENSGT00940000160740 #33	ENSGT00940000154327.b.e.a #34	ENSGT00940000158798 #35	ENSGT00530000063187.B.b #36	ENSGT00530000063187.B.a #37
Shrew mouse	MODERN SPECIES	19	Dhcr24 (MGP_PahariEiJ_G0028567) #7	Lexm (MGP_PahariEiJ_G0028568) #8	Ttc22 (MGP_PahariEiJ_G0028569) #9	Pars2 (MGP_PahariEiJ_G0028570) #10	Ttc4 (MGP_PahariEiJ_G0028571) #11	Mroh7 (MGP_PahariEiJ_G0028572) #12	Fam151a (MGP_PahariEiJ_G0028573) #13	Acot11 (MGP_PahariEiJ_G0028574) #14	Ssbp3 (MGP_PahariEiJ_G0028575) #15	Mrpl37 (MGP_PahariEiJ_G0028576) #16	Cyb5rl (MGP_PahariEiJ_G0028577) #17	Tceanc2 (MGP_PahariEiJ_G0028578) #18	Tmem59 (MGP_PahariEiJ_G0028579) #19	Ldlrad1 (MGP_PahariEiJ_G0028580) #20	Lrrc42 (MGP_PahariEiJ_G0028581) #21	Hspb11 (MGP_PahariEiJ_G0028582) #22	MGP_PahariEiJ_G0028583 #23	Yipf1 (MGP_PahariEiJ_G0028584) #24	Ndc1 (MGP_PahariEiJ_G0028585) #25	Glis1 (MGP_PahariEiJ_G0028586) #26	Dmrtb1 (MGP_PahariEiJ_G0028587) #27	Lrp8 (MGP_PahariEiJ_G0028588) #28	Magoh (MGP_PahariEiJ_G0028589) #29	Czib (MGP_PahariEiJ_G0028590) #30	Cpt2 (MGP_PahariEiJ_G0028591) #31	Slc1a7 (MGP_PahariEiJ_G0028592) #32	Podn (MGP_PahariEiJ_G0028593) #33	Scp2 (MGP_PahariEiJ_G0028594) #34	Echdc2 (MGP_PahariEiJ_G0028595) #35	Zyg11a (MGP_PahariEiJ_G0028596) #36	Zyg11b (MGP_PahariEiJ_G0028597) #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000015471 #8	ENSGT00390000007658 #9	ENSGT00390000010922 #10	ENSGT00510000049371 #11	ENSGT00940000161775 #12	ENSGT00530000063681.b.b #13	ENSGT00940000156460.C #14	ENSGT00950000183049.B #15	ENSGT00390000000867 #16	ENSGT00920000149170 #17	ENSGT00940000158291	ENSGT00390000014384 #18	ENSGT00390000008279.a #19	ENSGT00390000008557 #20	ENSGT00390000002727 #21	ENSGT00390000012620 #22	ENSGT00940000154482.b.a #23	ENSGT00390000010157.a #24	ENSGT00390000014590 #25	ENSGT00940000159218.b #26	ENSGT00940000161912 #27	ENSGT00940000154819.a.a #28	ENSGT00390000003156.a.a #29	ENSGT00390000001523 #30	ENSGT01060000248556.B.t #31	ENSGT00940000156073 #32	ENSGT00940000160740 #33	ENSGT00940000154327.b.e.a #34	ENSGT00940000158798 #35	ENSGT00530000063187.B.b #36	ENSGT00530000063187.B.a #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000015471 #8	ENSGT00390000007658 #9	ENSGT00390000010922 #10	ENSGT00510000049371 #11	ENSGT00940000161775 #12	ENSGT00530000063681.b.b #13	ENSGT00940000156460.C #14	ENSGT00950000183049.B #15	ENSGT00390000000867 #16	ENSGT00920000149170 #17	ENSGT00940000158291	ENSGT00390000014384 #18	ENSGT00390000008279.a #19	ENSGT00390000008557 #20	ENSGT00390000002727 #21	ENSGT00390000012620 #22	ENSGT00940000154482.b.a #23	ENSGT00390000010157.a #24	ENSGT00390000014590 #25	ENSGT00940000159218.b #26	ENSGT00940000161912 #27	ENSGT00940000154819.a.a #28	ENSGT00390000003156.a.a #29	ENSGT00390000001523 #30	ENSGT01060000248556.B.t #31	ENSGT00940000156073 #32	ENSGT00940000160740 #33	ENSGT00940000154327.b.e.a #34	ENSGT00940000158798 #35	ENSGT00530000063187.B.b #36	ENSGT00530000063187.B.a #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000015471 #8	ENSGT00390000007658 #9	ENSGT00390000010922 #10	ENSGT00510000049371 #11	ENSGT00940000161775 #12	ENSGT00530000063681.b.b #13	ENSGT00940000156460.C #14	ENSGT00950000183049.B #15	ENSGT00390000000867 #16	ENSGT00920000149170 #17	ENSGT00940000158291	ENSGT00390000014384 #18	ENSGT00390000008279.a #19	ENSGT00390000008557 #20	ENSGT00390000002727 #21	ENSGT00390000012620 #22	ENSGT00940000154482.b.a #23	ENSGT00390000010157.a #24	ENSGT00390000014590 #25	ENSGT00940000159218.b #26	ENSGT00940000161912 #27	ENSGT00940000154819.a.a #28	ENSGT00390000003156.a.a #29	ENSGT00390000001523 #30	ENSGT01060000248556.B.t #31	ENSGT00940000156073 #32	ENSGT00940000160740 #33	ENSGT00940000154327.b.e.a #34	ENSGT00940000158798 #35	ENSGT00530000063187.B.b #36	ENSGT00530000063187.B.a #37
Steppe mouse	MODERN SPECIES	3258								Ssbp3 (ENSMSIG00000014470) #15	Mrpl37 (ENSMSIG00000014453) #16	Cyb5rl (ENSMSIG00000014317) #17	Cdcp2 (ENSMSIG00000014299)	Tceanc2 (ENSMSIG00000014276) #18	Tmem59 (ENSMSIG00000014224) #19	Ldlrad1 (ENSMSIG00000014211) #20	Lrrc42 (ENSMSIG00000014171) #21	Hspb11 (ENSMSIG00000014150) #22	Dio1 (ENSMSIG00000014137) #23	Yipf1 (ENSMSIG00000014093) #24	Ndc1 (ENSMSIG00000014064) #25	Glis1 (ENSMSIG00000014034) #26	Dmrtb1 (ENSMSIG00000014025) #27	ENSMSIG00000013997	Shld2 (ENSMSIG00000013927)	Syt15 (ENSMSIG00000013893)	Gprin2 (ENSMSIG00000013885)	Npy4r (ENSMSIG00000013881)	Anxa8 (ENSMSIG00000013816)	Antxrl (ENSMSIG00000013787)	A630023A22Rik (ENSMSIG00000013763)	Gm5460 (ENSMSIG00000013673)	Gm30083 (ENSMSIG00000013609)
spretus	MODERN SPECIES	13	Lexm (MGP_SPRETEiJ_G0027203) #8	Ttc22 (MGP_SPRETEiJ_G0027204) #9	Pars2 (MGP_SPRETEiJ_G0027205) #10	Ttc4 (MGP_SPRETEiJ_G0027206) #11	Mroh7 (MGP_SPRETEiJ_G0027207) #12	Fam151a (MGP_SPRETEiJ_G0027208) #13	Acot11 (MGP_SPRETEiJ_G0027209) #14	Ssbp3 (MGP_SPRETEiJ_G0027210) #15	Mrpl37 (MGP_SPRETEiJ_G0027211) #16	Cyb5rl (MGP_SPRETEiJ_G0027212) #17	MGP_SPRETEiJ_G0027213	Tceanc2 (MGP_SPRETEiJ_G0027214) #18	Tmem59 (MGP_SPRETEiJ_G0027215) #19	Ldlrad1 (MGP_SPRETEiJ_G0027216) #20	Lrrc42 (MGP_SPRETEiJ_G0027217) #21	Hspb11 (MGP_SPRETEiJ_G0027218) #22	MGP_SPRETEiJ_G0027219 #23	Yipf1 (MGP_SPRETEiJ_G0027220) #24	Ndc1 (MGP_SPRETEiJ_G0027221) #25	Glis1 (MGP_SPRETEiJ_G0027222) #26	Dmrtb1 (MGP_SPRETEiJ_G0027223) #27	Lrp8 (MGP_SPRETEiJ_G0027224) #28	Magoh (MGP_SPRETEiJ_G0027225) #29	Czib (MGP_SPRETEiJ_G0027226) #30	Cpt2 (MGP_SPRETEiJ_G0027227) #31	Slc1a7 (MGP_SPRETEiJ_G0027228) #32	Podn (MGP_SPRETEiJ_G0027229) #33	Scp2 (MGP_SPRETEiJ_G0027230) #34	Echdc2 (MGP_SPRETEiJ_G0027231) #35	Zyg11a (MGP_SPRETEiJ_G0027232) #36	Zyg11b (MGP_SPRETEiJ_G0027233) #37
Mouse	MODERN SPECIES	13	Lexm (ENSMUSG00000054362) #8	Ttc22 (ENSMUSG00000034919) #9	Pars2 (ENSMUSG00000043572) #10	Ttc4 (ENSMUSG00000025413) #11	Mroh7 (ENSMUSG00000047502) #12	Fam151a (ENSMUSG00000034871) #13	Acot11 (ENSMUSG00000034853) #14	Ssbp3 (ENSMUSG00000061887) #15	Mrpl37 (ENSMUSG00000028622) #16	Cyb5rl (ENSMUSG00000028621) #17	Cdcp2 (ENSMUSG00000047636)	Tceanc2 (ENSMUSG00000028619) #18	Tmem59 (ENSMUSG00000028618) #19	Ldlrad1 (ENSMUSG00000070877) #20	Lrrc42 (ENSMUSG00000028617) #21	Hspb11 (ENSMUSG00000063172) #22	Dio1 (ENSMUSG00000034785) #23	Yipf1 (ENSMUSG00000057375) #24	Ndc1 (ENSMUSG00000028614) #25	Glis1 (ENSMUSG00000034762) #26	Dmrtb1 (ENSMUSG00000028610) #27	Lrp8 (ENSMUSG00000028613) #28	Magoh (ENSMUSG00000028609) #29	Czib (ENSMUSG00000028608) #30	Cpt2 (ENSMUSG00000028607) #31	Slc1a7 (ENSMUSG00000008932) #32	Podn (ENSMUSG00000028600) #33	Scp2 (ENSMUSG00000028603) #34	Echdc2 (ENSMUSG00000028601) #35	Zyg11a (ENSMUSG00000034645) #36	Zyg11b (ENSMUSG00000034636) #37
Ryukyu mouse	MODERN SPECIES	13	Lexm (MGP_CAROLIEiJ_G0026234) #8	Ttc22 (MGP_CAROLIEiJ_G0026235) #9	Pars2 (MGP_CAROLIEiJ_G0026236) #10	Ttc4 (MGP_CAROLIEiJ_G0026237) #11	Mroh7 (MGP_CAROLIEiJ_G0026238) #12	Fam151a (MGP_CAROLIEiJ_G0026239) #13	Acot11 (MGP_CAROLIEiJ_G0026240) #14	Ssbp3 (MGP_CAROLIEiJ_G0026241) #15	Mrpl37 (MGP_CAROLIEiJ_G0026242) #16	Cyb5rl (MGP_CAROLIEiJ_G0026243) #17	MGP_CAROLIEiJ_G0026244	Tceanc2 (MGP_CAROLIEiJ_G0026245) #18	Tmem59 (MGP_CAROLIEiJ_G0026246) #19	Ldlrad1 (MGP_CAROLIEiJ_G0026247) #20	Lrrc42 (MGP_CAROLIEiJ_G0026248) #21	Hspb11 (MGP_CAROLIEiJ_G0026249) #22	MGP_CAROLIEiJ_G0026250 #23	Yipf1 (MGP_CAROLIEiJ_G0026251) #24	Ndc1 (MGP_CAROLIEiJ_G0026252) #25	Glis1 (MGP_CAROLIEiJ_G0026253) #26	Dmrtb1 (MGP_CAROLIEiJ_G0026254) #27	Lrp8 (MGP_CAROLIEiJ_G0026255) #28	Magoh (MGP_CAROLIEiJ_G0026256) #29	Czib (MGP_CAROLIEiJ_G0026257) #30	Cpt2 (MGP_CAROLIEiJ_G0026258) #31	Slc1a7 (MGP_CAROLIEiJ_G0026259) #32	Podn (MGP_CAROLIEiJ_G0026260) #33	Scp2 (MGP_CAROLIEiJ_G0026261) #34	Echdc2 (MGP_CAROLIEiJ_G0026262) #35	Zyg11a (MGP_CAROLIEiJ_G0026263) #36	Zyg11b (MGP_CAROLIEiJ_G0026264) #37
Rat	MODERN SPECIES	15	Ttc22 (ENSRNOG00000007189) #9	Pars2 (ENSRNOG00000007327) #10	Ttc4 (ENSRNOG00000042467) #11	Mroh7 (ENSRNOG00000058870) #12	Fam151a (ENSRNOG00000007799) #13	Acot11 (ENSRNOG00000007837) #14	Ssbp3 (ENSRNOG00000007920) #15	Mrpl37 (ENSRNOG00000009078) #16	Cyb5rl (ENSRNOG00000009148) #17	ENSRNOG00000033165	Cdcp2 (ENSRNOG00000009221)	Tceanc2 (ENSRNOG00000009398) #18	Tmem59 (ENSRNOG00000009778) #19	Ldlrad1 (ENSRNOG00000037795) #20	Lrrc42 (ENSRNOG00000009983) #21	Ift25 (ENSRNOG00000010241) #22	Dio1 (ENSRNOG00000061237) #23	Yipf1 (ENSRNOG00000010512) #24	Ndc1 (ENSRNOG00000010620) #25	Glis1 (ENSRNOG00000000138) #26	Dmrtb1 (ENSRNOG00000023213) #27	Lrp8 (ENSRNOG00000013064) #28	Magoh (ENSRNOG00000012778) #29	Czib (ENSRNOG00000012724) #30	Cpt2 (ENSRNOG00000012443) #31	Slc1a7 (ENSRNOG00000011644) #32	Scp2 (ENSRNOG00000011413) #33	Echdc2 (ENSRNOG00000029333) #35	Zyg11a (ENSRNOG00000010885) #36	Zyg11b (ENSRNOG00000010859) #37	Coa7 (ENSRNOG00000010636)