Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000164079 #8	ENSGT00940000160979 #9	ENSGT00940000159657.d #10	ENSGT01100000263518.B.b.a #11	ENSGT00940000158955 #12	ENSGT00940000160431 #13	ENSGT00390000017780.f.g #14	ENSGT00940000159825 #15	ENSGT00730000111186 #16	ENSGT00390000008224 #17	ENSGT00940000156637 #18	ENSGT00900000143186	ENSGT00940000156777 #19	ENSGT00440000039564.a.a #20	ENSGT01030000234588.b.a #21	ENSGT00390000005256 #22	ENSGT00940000154709.a.a #23	ENSGT00940000156735 #24	ENSGT00940000162073 #25	ENSGT00390000000819.b #26	ENSGT00940000163864 #27	ENSGT00940000158289.b #28	ENSGT00940000159650 #29	ENSGT00940000163702 #30	ENSGT00940000154102.a #31	ENSGT01050000244888.a.b #32	ENSGT00950000182975.a.a.a.b #33	ENSGT00940000158639 #34	ENSGT00940000156834 #35	ENSGT00940000161586 #36	ENSGT00940000153391.c.b.b #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000164079 #8	ENSGT00940000160979 #9	ENSGT00940000159657.d #10	ENSGT01100000263518.B.b.a #11	ENSGT00940000158955 #12	ENSGT00940000160431 #13	ENSGT00390000017780.f.g #14	ENSGT00940000159825 #15	ENSGT00730000111186 #16	ENSGT00390000008224 #17	ENSGT00940000156637 #18	ENSGT00900000143186	ENSGT00940000156777 #19	ENSGT00440000039564.a.a #20	ENSGT01030000234588.b.a #21	ENSGT00390000005256 #22	ENSGT00940000154709.a.a #23	ENSGT00940000156735 #24	ENSGT00940000162073 #25	ENSGT00390000000819.b #26	ENSGT00940000163864 #27	ENSGT00940000158289.b #28	ENSGT00940000159650 #29	ENSGT00940000163702 #30	ENSGT00940000154102.a #31	ENSGT01050000244888.a.b #32	ENSGT00950000182975.a.a.a.b #33	ENSGT00940000158639 #34	ENSGT00940000156834 #35	ENSGT00940000161586 #36	ENSGT00940000153391.c.b.b #37
Mouse	MODERN SPECIES		Lgr6 (ENSMUSG00000042793) #7	Ptprv (ENSMUSG00000097993) #8	Ptpn7 (ENSMUSG00000031506) #9	Arl8a (ENSMUSG00000026426) #10	Gpr37l1 (ENSMUSG00000026424) #11	Elf3 (ENSMUSG00000003051) #12	Rnpep (ENSMUSG00000041926) #13	Timm17a (ENSMUSG00000062580) #14	Lmod1 (ENSMUSG00000048096) #15	Shisa4 (ENSMUSG00000041889) #16	Ipo9 (ENSMUSG00000041879) #17	Nav1 (ENSMUSG00000009418) #18	Csrp1 (ENSMUSG00000026421) #19	Phlda3 (ENSMUSG00000041801) #20	Tnni1 (ENSMUSG00000026418) #21	Lad1 (ENSMUSG00000041782) #22	Tnnt2 (ENSMUSG00000026414) #23	Pkp1 (ENSMUSG00000026413) #24	Igfn1 (ENSMUSG00000051985) #25	Tmem9 (ENSMUSG00000026411) #26	Ascl5 (ENSMUSG00000097918) #27	Cacna1s (ENSMUSG00000026407) #28	Kif21b (ENSMUSG00000041642) #29	Mroh3 (ENSMUSG00000087230) #30	Inava (ENSMUSG00000041605) #31	Gpr25 (ENSMUSG00000052759) #32	Camsap2 (ENSMUSG00000041570) #33	Ddx59 (ENSMUSG00000026404) #34	Kif14 (ENSMUSG00000041498) #35	Zfp281 (ENSMUSG00000041483) #36	Nr5a2 (ENSMUSG00000026398) #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000164079 #8	ENSGT00940000160979 #9	ENSGT00940000159657.d #10	ENSGT01100000263518.B.b.a #11	ENSGT00940000158955 #12	ENSGT00940000160431 #13	ENSGT00390000017780.f.g #14	ENSGT00940000159825 #15	ENSGT00730000111186 #16	ENSGT00390000008224 #17	ENSGT00940000156637 #18	ENSGT00900000143186	ENSGT00940000156777 #19	ENSGT00440000039564.a.a #20	ENSGT01030000234588.b.a #21	ENSGT00390000005256 #22	ENSGT00940000154709.a.a #23	ENSGT00940000156735 #24	ENSGT00940000162073 #25	ENSGT00390000000819.b #26	ENSGT00940000163864 #27	ENSGT00940000158289.b #28	ENSGT00940000159650 #29	ENSGT00940000163702 #30	ENSGT00940000154102.a #31	ENSGT01050000244888.a.b #32	ENSGT00950000182975.a.a.a.b #33	ENSGT00940000158639 #34	ENSGT00940000156834 #35	ENSGT00940000161586 #36	ENSGT00940000153391.c.b.b #37
spretus	MODERN SPECIES		Ube2t (MGP_SPRETEiJ_G0015436)	Lgr6 (MGP_SPRETEiJ_G0015437) #7	Ptpn7 (MGP_SPRETEiJ_G0015438) #9	Arl8a (MGP_SPRETEiJ_G0015439) #10	Gpr37l1 (MGP_SPRETEiJ_G0015440) #11	Elf3 (MGP_SPRETEiJ_G0015441) #12	Rnpep (MGP_SPRETEiJ_G0015442) #13	Timm17a (MGP_SPRETEiJ_G0015443) #14	Lmod1 (MGP_SPRETEiJ_G0015444) #15	Shisa4 (MGP_SPRETEiJ_G0015445) #16	Ipo9 (MGP_SPRETEiJ_G0015446) #17	Nav1 (MGP_SPRETEiJ_G0015447) #18	Csrp1 (MGP_SPRETEiJ_G0015448) #19	Phlda3 (MGP_SPRETEiJ_G0015449) #20	Tnni1 (MGP_SPRETEiJ_G0015450) #21	Lad1 (MGP_SPRETEiJ_G0015451) #22	Tnnt2 (MGP_SPRETEiJ_G0015452) #23	Pkp1 (MGP_SPRETEiJ_G0015453) #24	MGP_SPRETEiJ_G0015454 #25	Tmem9 (MGP_SPRETEiJ_G0015455) #26	Ascl5 (MGP_SPRETEiJ_G0015456) #27	Cacna1s (MGP_SPRETEiJ_G0015457) #28	Kif21b (MGP_SPRETEiJ_G0015458) #29	Mroh3 (MGP_SPRETEiJ_G0015459) #30	Inava (MGP_SPRETEiJ_G0015460) #31	Gpr25 (MGP_SPRETEiJ_G0015461) #32	Camsap2 (MGP_SPRETEiJ_G0015462) #33	Ddx59 (MGP_SPRETEiJ_G0015463) #34	Kif14 (MGP_SPRETEiJ_G0015464) #35	Zfp281 (MGP_SPRETEiJ_G0015465) #36	Nr5a2 (MGP_SPRETEiJ_G0015466) #37
Steppe mouse	MODERN SPECIES	3299	Arl8a (ENSMSIG00000016944) #10	Gpr37l1 (ENSMSIG00000016930) #11	Elf3 (ENSMSIG00000016889) #12	Rnpep (ENSMSIG00000016833) #13	ENSMSIG00000016819	Timm17a (ENSMSIG00000016796) #14	Lmod1 (ENSMSIG00000016771) #15	ENSMSIG00000016765 #16	Ipo9 (ENSMSIG00000016676) #17	ENSMSIG00000016668	ENSMSIG00000016660	Nav1 (ENSMSIG00000016388) #18	Csrp1 (ENSMSIG00000016352) #19	Phlda3 (ENSMSIG00000016346) #20	Tnni1 (ENSMSIG00000016248) #21	Lad1 (ENSMSIG00000016232) #22	Tnnt2 (ENSMSIG00000013795) #23	Pkp1 (ENSMSIG00000013746) #24	Igfn1 (ENSMSIG00000013674) #25	ENSMSIG00000013605 #26	Ascl5 (ENSMSIG00000013596) #27	Cacna1s (ENSMSIG00000013188) #28	Kif21b (ENSMSIG00000012992) #29	Mroh3 (ENSMSIG00000012959) #30	Inava (ENSMSIG00000012900) #31	ENSMSIG00000012897	Gpr25 (ENSMSIG00000012892) #32	Camsap2 (ENSMSIG00000012647) #33	ENSMSIG00000012627	Ddx59 (ENSMSIG00000012596) #34	ENSMSIG00000012582
Ryukyu mouse	MODERN SPECIES		Ube2t (MGP_CAROLIEiJ_G0014629)	Lgr6 (MGP_CAROLIEiJ_G0014630) #7	Ptpn7 (MGP_CAROLIEiJ_G0014631) #9	Arl8a (MGP_CAROLIEiJ_G0014632) #10	Gpr37l1 (MGP_CAROLIEiJ_G0014633) #11	Elf3 (MGP_CAROLIEiJ_G0014634) #12	Rnpep (MGP_CAROLIEiJ_G0014635) #13	Timm17a (MGP_CAROLIEiJ_G0014636) #14	Lmod1 (MGP_CAROLIEiJ_G0014637) #15	Shisa4 (MGP_CAROLIEiJ_G0014638) #16	Ipo9 (MGP_CAROLIEiJ_G0014639) #17	Nav1 (MGP_CAROLIEiJ_G0014640) #18	Csrp1 (MGP_CAROLIEiJ_G0014641) #19	Phlda3 (MGP_CAROLIEiJ_G0014642) #20	Tnni1 (MGP_CAROLIEiJ_G0014643) #21	Lad1 (MGP_CAROLIEiJ_G0014644) #22	Tnnt2 (MGP_CAROLIEiJ_G0014645) #23	Pkp1 (MGP_CAROLIEiJ_G0014646) #24	MGP_CAROLIEiJ_G0014647 #25	Tmem9 (MGP_CAROLIEiJ_G0014648) #26	Ascl5 (MGP_CAROLIEiJ_G0014649) #27	Cacna1s (MGP_CAROLIEiJ_G0014650) #28	Kif21b (MGP_CAROLIEiJ_G0014651) #29	MGP_CAROLIEiJ_G0014652 #30	Inava (MGP_CAROLIEiJ_G0014653) #31	Gpr25 (MGP_CAROLIEiJ_G0014654) #32	Camsap2 (MGP_CAROLIEiJ_G0014655) #33	Ddx59 (MGP_CAROLIEiJ_G0014656) #34	Kif14 (MGP_CAROLIEiJ_G0014657) #35	Zfp281 (MGP_CAROLIEiJ_G0014658) #36	Nr5a2 (MGP_CAROLIEiJ_G0014659) #37