Sarcopterygii	ANCESTRAL SPECIES	36	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.a	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00930000151482	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00940000159028 #21	ENSGT00940000166463	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28
Tetrapoda	ANCESTRAL SPECIES		ENSGT00940000157028	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.a	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01070000254066	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Amniota	ANCESTRAL SPECIES		ENSGT01050000244864.B.b	ENSGT00940000157028	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Mammalia	ANCESTRAL SPECIES	73										ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Theria	ANCESTRAL SPECIES	15	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Eutheria	ANCESTRAL SPECIES	3	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Laurasiatheria_c	ANCESTRAL SPECIES	23	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000265805	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Equus	ANCESTRAL SPECIES	25	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT01090000263368 #15	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000162555
Donkey	MODERN SPECIES	12	BTG4 (ENSEASG00005010081) #7	POU2AF1 (ENSEASG00005037560) #8	POU2AF3 (ENSEASG00005010085) #9	POU2AF2 (ENSEASG00005038793) #10	ARHGAP20 (ENSEASG00005010090) #11	ENSEASG00005036815 #12	RDX (ENSEASG00005010095) #13	ZC3H12C (ENSEASG00005010098) #14	ENSEASG00005010099 #15	ENSEASG00005010101 #16	C11orf87 (ENSEASG00005038755) #17	ENSEASG00005031476 #18	DDX10 (ENSEASG00005010110) #19	EXPH5 (ENSEASG00005010113) #20	POGLUT3 (ENSEASG00005010114) #21	C11orf65 (ENSEASG00005010115) #22	ENSEASG00005010259 #23	ENSEASG00005026237 #24	ENSEASG00005024929 #25	ENSEASG00005037930 #26	ACAT1 (ENSEASG00005010749) #27	CUL5 (ENSEASG00005010757) #28	RAB39A (ENSEASG00005029695) #29	SLC35F2 (ENSEASG00005011006) #30	ELMOD1 (ENSEASG00005011008) #31	ALKBH8 (ENSEASG00005011010) #32	CWF19L2 (ENSEASG00005011011) #33	GUCY1A2 (ENSEASG00005011012) #34	AASDHPPT (ENSEASG00005011016) #35	KBTBD3 (ENSEASG00005011019) #36	MSANTD4 (ENSEASG00005011020) #37
Horse	MODERN SPECIES	28	HOATZ (ENSECAG00000015877)	BTG4 (ENSECAG00000012564) #7	POU2AF1 (ENSECAG00000011348) #8	POU2AF3 (ENSECAG00000010274) #9	POU2AF2 (ENSECAG00000010032) #10	ENSECAG00000057665	ARHGAP20 (ENSECAG00000019958) #11	ENSECAG00000043895	FDX1 (ENSECAG00000017714) #12	RDX (ENSECAG00000002920) #13	ZC3H12C (ENSECAG00000000462) #14	ENSECAG00000056829 #15	C7H11orf87 (ENSECAG00000005641) #17	DDX10 (ENSECAG00000010355) #19	EXPH5 (ENSECAG00000008643) #20	C7H11orf65 (ENSECAG00000023635) #22	ATM (ENSECAG00000021147) #24	NPAT (ENSECAG00000008226) #26	ACAT1 (ENSECAG00000020128) #27	ENSECAG00000050219	CUL5 (ENSECAG00000024437) #28	RAB39A (ENSECAG00000024148) #29	SLC35F2 (ENSECAG00000019266) #30	ELMOD1 (ENSECAG00000010926) #31	ALKBH8 (ENSECAG00000019425) #32	CWF19L2 (ENSECAG00000004314) #33	GUCY1A2 (ENSECAG00000018191) #34	AASDHPPT (ENSECAG00000013032) #35	KBTBD3 (ENSECAG00000012801) #36	MSANTD4 (ENSECAG00000011320) #37	GRIA4 (ENSECAG00000009916)
Chiroptera	ANCESTRAL SPECIES	33	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000265805	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000015352.n	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Megabat	MODERN SPECIES	2798																ENSPVAG00000016406 #22	ATM (ENSPVAG00000016400) #24	NPAT (ENSPVAG00000016398) #26	ACAT1 (ENSPVAG00000016395) #27
Microchiroptera	ANCESTRAL SPECIES	34	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000265805	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000015352.n	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Greater horseshoe bat	MODERN SPECIES	2	MSANTD4 (ENSRFEG00010008997) #37	KBTBD3 (ENSRFEG00010009026) #36	AASDHPPT (ENSRFEG00010009049) #35	ENSRFEG00010009091	GUCY1A2 (ENSRFEG00010009109) #34	ENSRFEG00010009134	CWF19L2 (ENSRFEG00010009178) #33	ALKBH8 (ENSRFEG00010009220) #32	ELMOD1 (ENSRFEG00010009290) #31	ENSRFEG00010009424	SLC35F2 (ENSRFEG00010009447) #30	RAB39A (ENSRFEG00010009515) #29	CUL5 (ENSRFEG00010009566) #28	EXPH5 (ENSRFEG00010009629) #20	POGLUT3 (ENSRFEG00010009660) #21	C11orf65 (ENSRFEG00010009749) #22	ATM (ENSRFEG00010009837) #24	ENSRFEG00010009954	NPAT (ENSRFEG00010009984) #26	ACAT1 (ENSRFEG00010010049) #27	DDX10 (ENSRFEG00010010069) #19	ENSRFEG00010010141	C11orf87 (ENSRFEG00010010156) #17	ZC3H12C (ENSRFEG00010010192) #14	RDX (ENSRFEG00010010314) #13	ENSRFEG00010010451 #12	ARHGAP20 (ENSRFEG00010010551) #11	POU2AF2 (ENSRFEG00010011003) #10	POU2AF3 (ENSRFEG00010011079) #9	POU2AF1 (ENSRFEG00010011189) #8	BTG4 (ENSRFEG00010011226) #7
Carnivora	ANCESTRAL SPECIES	21	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Caniformia	ANCESTRAL SPECIES	17	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000264760	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000264760	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Ursidae	ANCESTRAL SPECIES	15	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00940000154509.q.b	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000264760	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Giant Panda	MODERN SPECIES	18	LAYN (ENSAMEG00000004312)	HOATZ (ENSAMEG00000030155)	BTG4 (ENSAMEG00000004327) #7	POU2AF1 (ENSAMEG00000029072) #8	POU2AF3 (ENSAMEG00000004344) #9	POU2AF2 (ENSAMEG00000023615) #10	ARHGAP20 (ENSAMEG00000009124) #11	FDX1 (ENSAMEG00000009142) #12	RDX (ENSAMEG00000009147) #13	ZC3H12C (ENSAMEG00000009188) #14	ENSAMEG00000024316	C11orf87 (ENSAMEG00000028662) #17	DDX10 (ENSAMEG00000009232) #19	EXPH5 (ENSAMEG00000009285) #20	POGLUT3 (ENSAMEG00000009298) #21	C11orf65 (ENSAMEG00000016740) #22	ATM (ENSAMEG00000016741) #24	ACAT1 (ENSAMEG00000016770) #27	CUL5 (ENSAMEG00000016779) #28	RAB39A (ENSAMEG00000002249) #29	SLC35F2 (ENSAMEG00000002230) #30	ENSAMEG00000019353	ELMOD1 (ENSAMEG00000002195) #31	ALKBH8 (ENSAMEG00000002177) #32	CWF19L2 (ENSAMEG00000015500) #33	ENSAMEG00000019460	GUCY1A2 (ENSAMEG00000014522) #34	AASDHPPT (ENSAMEG00000000370) #35	KBTBD3 (ENSAMEG00000000382) #36	ENSAMEG00000000384 #37	ENSAMEG00000000390
Ursus	ANCESTRAL SPECIES	17	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00940000154509.q.b	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT01030000234886
Polar bear	MODERN SPECIES	166	BTG4 (ENSUMAG00000007240) #7	POU2AF1 (ENSUMAG00000007243) #8	POU2AF3 (ENSUMAG00000007245) #9	POU2AF2 (ENSUMAG00000007248) #10	ARHGAP20 (ENSUMAG00000007259) #11	ENSUMAG00000007260 #12	RDX (ENSUMAG00000007273) #13	ZC3H12C (ENSUMAG00000007283) #14	ENSUMAG00000007287	C11orf87 (ENSUMAG00000007292) #17	ENSUMAG00000007293	DDX10 (ENSUMAG00000007300) #19	ENSUMAG00000007365	EXPH5 (ENSUMAG00000007368) #20	POGLUT3 (ENSUMAG00000007380) #21	C11orf65 (ENSUMAG00000007388) #22	ATM (ENSUMAG00000007491) #24	NPAT (ENSUMAG00000008659) #26	ACAT1 (ENSUMAG00000008664) #27	CUL5 (ENSUMAG00000008690) #28	ENSUMAG00000008701 #29	SLC35F2 (ENSUMAG00000008709) #30	ELMOD1 (ENSUMAG00000008718) #31	ALKBH8 (ENSUMAG00000008743) #32	CWF19L2 (ENSUMAG00000008758) #33	GUCY1A2 (ENSUMAG00000008864) #34	ENSUMAG00000008866	AASDHPPT (ENSUMAG00000008871) #35	KBTBD3 (ENSUMAG00000008879) #36	MSANTD4 (ENSUMAG00000008883) #37	GRIA4 (ENSUMAG00000008904)
Mustelinae	ANCESTRAL SPECIES	111											ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000264760	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
American mink	MODERN SPECIES	382												ENSNVIG00000024527	DDX10 (ENSNVIG00000024516) #19	EXPH5 (ENSNVIG00000024504) #20	POGLUT3 (ENSNVIG00000024497) #21	C11orf65 (ENSNVIG00000024478) #22	ATM (ENSNVIG00000024437) #24	NPAT (ENSNVIG00000024434) #26	ACAT1 (ENSNVIG00000024420) #27	CUL5 (ENSNVIG00000024393) #28	RAB39A (ENSNVIG00000024387) #29	SLC35F2 (ENSNVIG00000024370) #30	ENSNVIG00000024368	ELMOD1 (ENSNVIG00000024353) #31	ALKBH8 (ENSNVIG00000024329) #32
Canidae	ANCESTRAL SPECIES	27	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000159989.i.b	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000163894	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000017443.g.a.a	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Canis_lupus	ANCESTRAL SPECIES	28	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000159989.i.b	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00940000172808	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00940000162741.j.k	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000163894	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000017443.g.a.a	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Dog	MODERN SPECIES	33	COLCA2 (ENSCAFG00845002654) #9	POU2AF2 (ENSCAFG00845002682) #10	ENSCAFG00845002692	ENSCAFG00845002745 #11	ENSCAFG00845002849	ENSCAFG00845002863	FDX1 (ENSCAFG00845002886) #12	RDX (ENSCAFG00845002972) #13	ZC3H12C (ENSCAFG00845003069) #14	ENSCAFG00845003205	C11orf87 (ENSCAFG00845003273) #17	DDX10 (ENSCAFG00845003310) #19	EXPH5 (ENSCAFG00845003361) #20	POGLUT3 (ENSCAFG00845003378) #21	ENSCAFG00845003413	C5H11orf65 (ENSCAFG00845003421) #22	ATM (ENSCAFG00845003472) #24	NPAT (ENSCAFG00845003530) #26	ACAT1 (ENSCAFG00845003582) #27	CUL5 (ENSCAFG00845003623) #28	ENSCAFG00845003643	RAB39A (ENSCAFG00845003650) #29	SLC35F2 (ENSCAFG00845003658) #30	ENSCAFG00845003675	SLN (ENSCAFG00845003683)	ELMOD1 (ENSCAFG00845003730) #31	ALKBH8 (ENSCAFG00845003777) #32	CWF19L2 (ENSCAFG00845003823) #33	GUCY1A2 (ENSCAFG00845003912) #34	ENSCAFG00845003965	AASDHPPT (ENSCAFG00845004003) #35
Dingo	MODERN SPECIES	214	POU2AF3 (ENSCAFG00020006830) #9	POU2AF2 (ENSCAFG00020006833) #10	ENSCAFG00020006843	ENSCAFG00020006857	ARHGAP20 (ENSCAFG00020006864) #11	ENSCAFG00020006871	FDX1 (ENSCAFG00020006888) #12	RDX (ENSCAFG00020006896) #13	ZC3H12C (ENSCAFG00020006999) #14	ENSCAFG00020007020	C11orf87 (ENSCAFG00020007045) #17	DDX10 (ENSCAFG00020007058) #19	EXPH5 (ENSCAFG00020007067) #20	POGLUT3 (ENSCAFG00020007097) #21	ENSCAFG00020007106	C11orf65 (ENSCAFG00020007145) #22	ATM (ENSCAFG00020007155) #24	NPAT (ENSCAFG00020007288) #26	ACAT1 (ENSCAFG00020007312) #27	CUL5 (ENSCAFG00020007388) #28	ENSCAFG00020008825	RAB39A (ENSCAFG00020008828) #29	SLC35F2 (ENSCAFG00020008833) #30	ELMOD1 (ENSCAFG00020008836) #31	ENSCAFG00020008866	ALKBH8 (ENSCAFG00020008876) #32	CWF19L2 (ENSCAFG00020008885) #33	GUCY1A2 (ENSCAFG00020008933) #34	ENSCAFG00020008979	AASDHPPT (ENSCAFG00020008990) #35	KBTBD3 (ENSCAFG00020008995) #36
Red fox	MODERN SPECIES	61	BTG4 (ENSVVUG00000015790) #7	POU2AF1 (ENSVVUG00000015766) #8	COLCA2 (ENSVVUG00000015759) #9	POU2AF2 (ENSVVUG00000015755) #10	ARHGAP20 (ENSVVUG00000015612) #11	ENSVVUG00000015600	ENSVVUG00000015592 #12	RDX (ENSVVUG00000015566) #13	ENSVVUG00000015552 #14	ENSVVUG00000015542	C11orf87 (ENSVVUG00000015518) #17	ENSVVUG00000015501	DDX10 (ENSVVUG00000015484) #19	EXPH5 (ENSVVUG00000015475) #20	POGLUT3 (ENSVVUG00000015460) #21	CUNH11orf65 (ENSVVUG00000015456) #22	ATM (ENSVVUG00000014332) #24	NPAT (ENSVVUG00000014091) #26	ACAT1 (ENSVVUG00000014076) #27	ENSVVUG00000014072	CUL5 (ENSVVUG00000014050) #28	ENSVVUG00000014044 #29	SLC35F2 (ENSVVUG00000014033) #30	ENSVVUG00000014026	ELMOD1 (ENSVVUG00000014009) #31	ALKBH8 (ENSVVUG00000013994) #32	ENSVVUG00000013987 #33	ENSVVUG00000013985	GUCY1A2 (ENSVVUG00000013971) #34	ENSVVUG00000013969	ENSVVUG00000013968
Felidae	ANCESTRAL SPECIES		ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT00390000005254.i.b	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000015352.o.b	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Panthera	ANCESTRAL SPECIES	26	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT00390000005254.i.b	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000015352.o.b	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Panthera_a	ANCESTRAL SPECIES	29	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT00390000005254.i.b	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000015352.o.b	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
leopard	MODERN SPECIES	54	SIK2 (ENSPPRG00000001032)	LAYN (ENSPPRG00000000578)	HOATZ (ENSPPRG00000023148)	BTG4 (ENSPPRG00000022090) #7	POU2AF1 (ENSPPRG00000020717) #8	POU2AF3 (ENSPPRG00000018973) #9	POU2AF2 (ENSPPRG00000014820) #10	ARHGAP20 (ENSPPRG00000013980) #11	FDX1 (ENSPPRG00000011447) #12	ENSPPRG00000015609	RDX (ENSPPRG00000010560) #13	ZC3H12C (ENSPPRG00000006582) #14	C11orf87 (ENSPPRG00000015366) #17	DDX10 (ENSPPRG00000005990) #19	POGLUT3 (ENSPPRG00000002881) #21	C11orf65 (ENSPPRG00000002213) #22	ATM (ENSPPRG00000001174) #24	NPAT (ENSPPRG00000022955) #26	ACAT1 (ENSPPRG00000023179) #27	CUL5 (ENSPPRG00000023452) #28	RAB39A (ENSPPRG00000023742) #29	SLC35F2 (ENSPPRG00000022590) #30	SLN (ENSPPRG00000015013)	ELMOD1 (ENSPPRG00000020066) #31	ALKBH8 (ENSPPRG00000017697) #32	CWF19L2 (ENSPPRG00000012736) #33	ENSPPRG00000012049	GUCY1A2 (ENSPPRG00000011788) #34
lion	MODERN SPECIES	10	LAYN (ENSPLOG00000012112)	HOATZ (ENSPLOG00000012025)	BTG4 (ENSPLOG00000011880) #7	POU2AF1 (ENSPLOG00000011798) #8	POU2AF3 (ENSPLOG00000011748) #9	POU2AF2 (ENSPLOG00000011666) #10	ARHGAP20 (ENSPLOG00000011147) #11	FDX1 (ENSPLOG00000011029) #12	ENSPLOG00000011006	RDX (ENSPLOG00000022204) #13	ZC3H12C (ENSPLOG00000022181) #14	C11orf87 (ENSPLOG00000022168) #17	DDX10 (ENSPLOG00000022097) #19	EXPH5 (ENSPLOG00000022082) #20	POGLUT3 (ENSPLOG00000022067) #21	C11orf65 (ENSPLOG00000022057) #22	ATM (ENSPLOG00000021964) #24	NPAT (ENSPLOG00000021890) #26	ACAT1 (ENSPLOG00000021818) #27	CUL5 (ENSPLOG00000021627) #28	RAB39A (ENSPLOG00000021531) #29	SLC35F2 (ENSPLOG00000021519) #30	ENSPLOG00000021511	ELMOD1 (ENSPLOG00000021429) #31	ALKBH8 (ENSPLOG00000021289) #32	CWF19L2 (ENSPLOG00000021204) #33	ENSPLOG00000021113	GUCY1A2 (ENSPLOG00000021082) #34	AASDHPPT (ENSPLOG00000021049) #35	KBTBD3 (ENSPLOG00000021027) #36	MSANTD4 (ENSPLOG00000021006) #37
Tiger	MODERN SPECIES	104										ARHGAP20 (ENSPTIG00000009465) #11	FDX1 (ENSPTIG00000009570) #12	RDX (ENSPTIG00000009668) #13	ZC3H12C (ENSPTIG00000009995) #14	DDX10 (ENSPTIG00000010152) #19	POGLUT3 (ENSPTIG00000010545) #21	C11orf65 (ENSPTIG00000010562) #22	ATM (ENSPTIG00000010642) #24	NPAT (ENSPTIG00000010746) #26	ACAT1 (ENSPTIG00000010779) #27	CUL5 (ENSPTIG00000010822) #28	RAB39A (ENSPTIG00000010919) #29	SLC35F2 (ENSPTIG00000010937) #30	SLN (ENSPTIG00000008170)	ELMOD1 (ENSPTIG00000011016) #31	ALKBH8 (ENSPTIG00000011062) #32	CWF19L2 (ENSPTIG00000011569) #33
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Cetacea	ANCESTRAL SPECIES	4	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00940000156477.l	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00950000182878.b.b.k.a.a	ENSGT00940000155627 #33	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00940000156477.l	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00950000182878.b.b.k.a.a	ENSGT00940000155627 #33	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Beluga whale	MODERN SPECIES	70	ENSDLEG00000008751 #9	POU2AF2 (ENSDLEG00000008732) #10	ENSDLEG00000008710	ENSDLEG00000008699	ARHGAP20 (ENSDLEG00000008621) #11	FDX1 (ENSDLEG00000008588) #12	RDX (ENSDLEG00000008540) #13	ZC3H12C (ENSDLEG00000008479) #14	ENSDLEG00000008457	ENSDLEG00000008439	CUNH11orf87 (ENSDLEG00000008428) #17	DDX10 (ENSDLEG00000008220) #19	EXPH5 (ENSDLEG00000008158) #20	KDELC2 (ENSDLEG00000008140) #21	ENSDLEG00000008105	CUNH11orf65 (ENSDLEG00000008087) #22	ATM (ENSDLEG00000007995) #24	NPAT (ENSDLEG00000007940) #26	ACAT1 (ENSDLEG00000014983) #27	CUL5 (ENSDLEG00000014733) #28	RAB39A (ENSDLEG00000014698) #29	ENSDLEG00000014688	SLC35F2 (ENSDLEG00000014674) #30	ELMOD1 (ENSDLEG00000014648) #31	ALKBH8 (ENSDLEG00000014623) #32
Narwhal	MODERN SPECIES	314	BTG4 (ENSMMNG00015020784) #7	POU2AF1 (ENSMMNG00015020803) #8	POU2AF3 (ENSMMNG00015020822) #9	POU2AF2 (ENSMMNG00015020838) #10	ENSMMNG00015020858	ARHGAP20 (ENSMMNG00015020888) #11	ENSMMNG00015020921 #12	RDX (ENSMMNG00015020952) #13	ZC3H12C (ENSMMNG00015021026) #14	ENSMMNG00015021068	ENSMMNG00015021080	C11orf87 (ENSMMNG00015021100) #17	DDX10 (ENSMMNG00015021116) #19	EXPH5 (ENSMMNG00015021131) #20	POGLUT3 (ENSMMNG00015021154) #21	C11orf65 (ENSMMNG00015021178) #22	ATM (ENSMMNG00015021198) #24	NPAT (ENSMMNG00015021227) #26	ACAT1 (ENSMMNG00015021293) #27	ENSMMNG00015021311	CUL5 (ENSMMNG00015021322) #28	RAB39A (ENSMMNG00015021350) #29	ENSMMNG00015021362	SLC35F2 (ENSMMNG00015014816) #30	ENSMMNG00015014831	ELMOD1 (ENSMMNG00015014848) #31	ALKBH8 (ENSMMNG00015014868) #32	GUCY1A2 (ENSMMNG00015014900) #34	ENSMMNG00015014920	CWF19L2 (ENSMMNG00015014936) #33	AASDHPPT (ENSMMNG00015014982) #35
Vaquita	MODERN SPECIES	19	BTG4 (ENSPSNG00000007443) #7	ENSPSNG00000007489	POU2AF1 (ENSPSNG00000007506) #8	POU2AF3 (ENSPSNG00000007536) #9	POU2AF2 (ENSPSNG00000007586) #10	ARHGAP20 (ENSPSNG00000007657) #11	FDX1 (ENSPSNG00000007835) #12	RDX (ENSPSNG00000007869) #13	ZC3H12C (ENSPSNG00000007958) #14	ENSPSNG00000008028	C11orf87 (ENSPSNG00000008061) #17	ENSPSNG00000008073	ENSPSNG00000008091	EXPH5 (ENSPSNG00000008136) #20	POGLUT3 (ENSPSNG00000008193) #21	C11orf65 (ENSPSNG00000008266) #22	ATM (ENSPSNG00000008366) #24	NPAT (ENSPSNG00000008455) #26	CUL5 (ENSPSNG00000008548) #28	RAB39A (ENSPSNG00000008734) #29	ENSPSNG00000008761	SLC35F2 (ENSPSNG00000008805) #30	ELMOD1 (ENSPSNG00000008894) #31	ALKBH8 (ENSPSNG00000008972) #32	ENSPSNG00000009069	ENSPSNG00000009080	GUCY1A2 (ENSPSNG00000009108) #34	ENSPSNG00000009179	CWF19L2 (ENSPSNG00000009225) #33	AASDHPPT (ENSPSNG00000009261) #35	KBTBD3 (ENSPSNG00000009333) #36
Dolphin	MODERN SPECIES	1658													DDX10 (ENSTTRG00000006068) #19	EXPH5 (ENSTTRG00000006067) #20	POGLUT3 (ENSTTRG00000006066) #21	C11orf65 (ENSTTRG00000006065) #22	ATM (ENSTTRG00000006062) #24	NPAT (ENSTTRG00000006061) #26
Sperm whale	MODERN SPECIES	7	ENSPCTG00005004298	POU2AF1 (ENSPCTG00005004311) #8	POU2AF3 (ENSPCTG00005004340) #9	POU2AF2 (ENSPCTG00005004366) #10	ARHGAP20 (ENSPCTG00005004425) #11	FDX1 (ENSPCTG00005004590) #12	RDX (ENSPCTG00005004655) #13	ZC3H12C (ENSPCTG00005004817) #14	ENSPCTG00005004846	ENSPCTG00005004876	C16H11orf87 (ENSPCTG00005004900) #17	ENSPCTG00005004908	DDX10 (ENSPCTG00005004923) #19	EXPH5 (ENSPCTG00005004945) #20	POGLUT3 (ENSPCTG00005004972) #21	C16H11orf65 (ENSPCTG00005005016) #22	ATM (ENSPCTG00005005102) #24	NPAT (ENSPCTG00005005301) #26	ACAT1 (ENSPCTG00005005385) #27	CUL5 (ENSPCTG00005005470) #28	ENSPCTG00005005517	RAB39A (ENSPCTG00005005532) #29	SLC35F2 (ENSPCTG00005005561) #30	ENSPCTG00005005666	ELMOD1 (ENSPCTG00005005706) #31	ALKBH8 (ENSPCTG00005005892) #32	ENSPCTG00005005948	GUCY1A2 (ENSPCTG00005005964) #34	CWF19L2 (ENSPCTG00005006064) #33	AASDHPPT (ENSPCTG00005006202) #35	KBTBD3 (ENSPCTG00005006219) #36
Blue whale	MODERN SPECIES	19	POU2AF1 (ENSBMSG00010006194) #8	POU2AF3 (ENSBMSG00010006172) #9	POU2AF2 (ENSBMSG00010006154) #10	ENSBMSG00010006096	ARHGAP20 (ENSBMSG00010006030) #11	FDX1 (ENSBMSG00010006005) #12	RDX (ENSBMSG00010005964) #13	ZC3H12C (ENSBMSG00010005891) #14	ENSBMSG00010005874	C11orf87 (ENSBMSG00010005868) #17	ENSBMSG00010005856	DDX10 (ENSBMSG00010005845) #19	EXPH5 (ENSBMSG00010005824) #20	POGLUT3 (ENSBMSG00010005798) #21	ENSBMSG00010005777	C11orf65 (ENSBMSG00010005759) #22	ATM (ENSBMSG00010005723) #24	NPAT (ENSBMSG00010005693) #26	ACAT1 (ENSBMSG00010005661) #27	CUL5 (ENSBMSG00010005626) #28	ENSBMSG00010005612	TTC12 (ENSBMSG00010005577)	ANKK1 (ENSBMSG00010005556)	DRD2 (ENSBMSG00010005538)	TMPRSS5 (ENSBMSG00010005444)	ZW10 (ENSBMSG00010005389)	USP28 (ENSBMSG00010005292)	HTR3B (ENSBMSG00010005243)	HTR3A (ENSBMSG00010005211)	ZBTB16 (ENSBMSG00010005183)	ENSBMSG00010005174
Pecora	ANCESTRAL SPECIES	7	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00520000058823	ENSGT00940000162506	ENSGT00950000183200.A.a.a
Yarkand deer	MODERN SPECIES		LAYN (ENSCHYG00000000165)	HOATZ (ENSCHYG00000000123)	BTG4 (ENSCHYG00000000103) #7	POU2AF1 (ENSCHYG00000000067) #8	POU2AF3 (ENSCHYG00000000048) #9	POU2AF2 (ENSCHYG00000000034) #10	ARHGAP20 (ENSCHYG00000000014) #11	FDX1 (ENSCHYG00000003362) #12	RDX (ENSCHYG00000003229) #13	ZC3H12C (ENSCHYG00000003190) #14	ENSCHYG00000003130 #17	DDX10 (ENSCHYG00000003093) #19	EXPH5 (ENSCHYG00000003078) #20	POGLUT3 (ENSCHYG00000003058) #21	ENSCHYG00000003045	C11orf65 (ENSCHYG00000003029) #22	ATM (ENSCHYG00000002993) #24	NPAT (ENSCHYG00000002947) #26	ENSCHYG00000002932 ##13	ACAT1 (ENSCHYG00000002805) #27	CUL5 (ENSCHYG00000002728) #28	RAB39A (ENSCHYG00000002676) #29	SLC35F2 (ENSCHYG00000002643) #30	ENSCHYG00000002623	ENSCHYG00000002615	ELMOD1 (ENSCHYG00000002579) #31	ALKBH8 (ENSCHYG00000002526) #32	ENSCHYG00000002507	ENSCHYG00000002498	GUCY1A2 (ENSCHYG00000002488) #34	ENSCHYG00000002475
Percora_a	ANCESTRAL SPECIES	6	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00520000058823	ENSGT00940000162506	ENSGT00950000183200.A.a.a
Bovidae	ANCESTRAL SPECIES	6	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00520000058823	ENSGT00940000162506	ENSGT00950000183200.A.a.a
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00520000058823	ENSGT00940000162506	ENSGT00950000183200.A.a.a	ENSGT00940000160158	ENSGT00390000012084
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020016124	HOATZ (ENSOARG00020015720)	BTG4 (ENSOARG00020015591) #7	POU2AF1 (ENSOARG00020015552) #8	POU2AF3 (ENSOARG00020015480) #9	ENSOARG00020015269	ENSOARG00020015233	ARHGAP20 (ENSOARG00020013814) #11	FDX1 (ENSOARG00020013685) #12	RDX (ENSOARG00020013266) #13	ZC3H12C (ENSOARG00020012692) #14	C11orf87 (ENSOARG00020012655) #17	DDX10 (ENSOARG00020012337) #19	ENSOARG00020012164 #21	ENSOARG00020012131 #21	C11orf65 (ENSOARG00020012048) #22	ATM (ENSOARG00020011525) #24	NPAT (ENSOARG00020011163) #26	ACAT1 (ENSOARG00020011001) #27	CUL5 (ENSOARG00020010776) #28	RAB39A (ENSOARG00020010714) #29	SLC35F2 (ENSOARG00020010531) #30	ENSOARG00020010502	ELMOD1 (ENSOARG00020010015) #31	GUCY1A2 (ENSOARG00020024499) #34	OTX2 (ENSOARG00020024485)	CWF19L2 (ENSOARG00020024318) #33	C11orf97 (ENSOARG00020024290)	FUT4 (ENSOARG00020024279)	ENSOARG00020024270	PIWIL4 (ENSOARG00020024217)
Goat	MODERN SPECIES	6	HOATZ (ENSCHIG00000026923)	BTG4 (ENSCHIG00000017012) #7	POU2AF1 (ENSCHIG00000020104) #8	ENSCHIG00000019618 #9	POU2AF2 (ENSCHIG00000022867) #10	ARHGAP20 (ENSCHIG00000015605) #11	FDX1 (ENSCHIG00000011264) #12	RDX (ENSCHIG00000019539) #13	ENSCHIG00000005668	ZC3H12C (ENSCHIG00000021221) #14	C11orf87 (ENSCHIG00000010296) #17	DDX10 (ENSCHIG00000015147) #19	ENSCHIG00000025788	EXPH5 (ENSCHIG00000023120) #20	POGLUT3 (ENSCHIG00000021251) #21	C11orf65 (ENSCHIG00000016475) #22	ATM (ENSCHIG00000016588) #24	NPAT (ENSCHIG00000016984) #26	ENSCHIG00000025404	ACAT1 (ENSCHIG00000021198) #27	CUL5 (ENSCHIG00000023581) #28	RAB39A (ENSCHIG00000019858) #29	SLC35F2 (ENSCHIG00000024400) #30	ELMOD1 (ENSCHIG00000016129) #31	ALKBH8 (ENSCHIG00000008649) #32	ENSCHIG00000009937	ENSCHIG00000012992 #34	ENSCHIG00000016274 #34	CWF19L2 (ENSCHIG00000013182) #33	C11orf97 (ENSCHIG00000025332)	FUT4 (ENSCHIG00000013426)
Bovinae	ANCESTRAL SPECIES	21	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a.g #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00520000058823	ENSGT00940000162506	ENSGT00950000183200.A.a.a
Bos	ANCESTRAL SPECIES	20	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a.g #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00390000018141.i.a.b.b.a.a.b.a.a.a.b.b	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00520000058823	ENSGT00940000162506	ENSGT00950000183200.A.a.a
Bos_a	ANCESTRAL SPECIES	15	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a.g #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00390000018141.i.a.b.b.a.a.b.a.a.a.b.b	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00520000058823	ENSGT00940000162506	ENSGT00950000183200.A.a.a
Wild yak	MODERN SPECIES	2622														EXPH5 (ENSBMUG00000007079) #20	POGLUT3 (ENSBMUG00000007094) #21	C11orf65 (ENSBMUG00000007110) #22
Domestic yak	MODERN SPECIES	4	LAYN (ENSBGRG00000011284)	HOATZ (ENSBGRG00000011818)	BTG4 (ENSBGRG00000011931) #7	POU2AF1 (ENSBGRG00000011991) #8	POU2AF3 (ENSBGRG00000012117) #9	POU2AF2 (ENSBGRG00000012226) #10	ARHGAP20 (ENSBGRG00000012303) #11	FDX1 (ENSBGRG00000012771) #12	RDX (ENSBGRG00000012922) #13	ZC3H12C (ENSBGRG00000013345) #14	ENSBGRG00000013524	C11orf87 (ENSBGRG00000013586) #17	DDX10 (ENSBGRG00000013616) #19	EXPH5 (ENSBGRG00000013750) #20	POGLUT3 (ENSBGRG00000013901) #21	C11orf65 (ENSBGRG00000013973) #22	ATM (ENSBGRG00000014113) #24	NPAT (ENSBGRG00000014342) #26	ENSBGRG00000015349	ACAT1 (ENSBGRG00000015383) #27	CUL5 (ENSBGRG00000015749) #28	ENSBGRG00000016014	RAB39A (ENSBGRG00000016041) #29	ENSBGRG00000016082	ENSBGRG00000016110 #30	ENSBGRG00000016445	ELMOD1 (ENSBGRG00000016467) #31	ALKBH8 (ENSBGRG00000016689) #32	ENSBGRG00000016943	GUCY1A2 (ENSBGRG00000009963) #34	CWF19L2 (ENSBGRG00000010092) #33
Bos_b	ANCESTRAL SPECIES	19	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a.g #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00390000018141.i.a.b.b.a.a.b.a.a.a.b.b	ENSGT00940000157765 #34	ENSGT00940000155627 #33	ENSGT00520000058823	ENSGT00940000162506	ENSGT00950000183200.A.a.a
Hybrid Bos Indicus	MODERN SPECIES	6	LAYN (ENSBIXG00005003290)	BTG4 (ENSBIXG00005003249) #7	POU2AF1 (ENSBIXG00005019815) #8	POU2AF3 (ENSBIXG00005005670) #9	POU2AF2 (ENSBIXG00005003226) #10	ARHGAP20 (ENSBIXG00005019662) #11	FDX1 (ENSBIXG00005006592) #12	RDX (ENSBIXG00005019485) #13	ENSBIXG00005003140	ZC3H12C (ENSBIXG00005019306) #14	ENSBIXG00005019217	ENSBIXG00005007819 #17	DDX10 (ENSBIXG00005019167) #19	EXPH5 (ENSBIXG00005019057) #20	POGLUT3 (ENSBIXG00005002657) #21	C11orf65 (ENSBIXG00005019001) #22	ENSBIXG00005018983	ATM (ENSBIXG00005018945) #24	NPAT (ENSBIXG00005018906) #26	ACAT1 (ENSBIXG00005018887) #27	CUL5 (ENSBIXG00005003066) #28	RAB39A (ENSBIXG00005018809) #29	ENSBIXG00005018780 #30	ENSBIXG00005003044	ELMOD1 (ENSBIXG00005018713) #31	ALKBH8 (ENSBIXG00005018650) #32	ENSBIXG00005007655	GUCY1A2 (ENSBIXG00005018531) #34	CWF19L2 (ENSBIXG00005018327) #33	C11orf97 (ENSBIXG00005018281)	FUT4 (ENSBIXG00005018272)
Cow	MODERN SPECIES	6	HOATZ (ENSBTAG00000034338)	BTG4 (ENSBTAG00000034346) #7	POU2AF1 (ENSBTAG00000006282) #8	POU2AF3 (ENSBTAG00000052702) #9	POU2AF2 (ENSBTAG00000044177) #10	ENSBTAG00000049167	ARHGAP20 (ENSBTAG00000000333) #11	FDX1 (ENSBTAG00000011793) #12	RDX (ENSBTAG00000004672) #13	ZC3H12C (ENSBTAG00000008732) #14	ENSBTAG00000051234	C15H11orf87 (ENSBTAG00000050066) #17	DDX10 (ENSBTAG00000002382) #19	EXPH5 (ENSBTAG00000008253) #20	POGLUT3 (ENSBTAG00000008709) #21	C15H11orf65 (ENSBTAG00000054246) #22	ATM (ENSBTAG00000003111) #24	NPAT (ENSBTAG00000010286) #26	ACAT1 (ENSBTAG00000012885) #27	CUL5 (ENSBTAG00000012882) #28	RAB39A (ENSBTAG00000018246) #29	ENSBTAG00000003661 #30	SLN (ENSBTAG00000048585)	ELMOD1 (ENSBTAG00000002691) #31	ALKBH8 (ENSBTAG00000010642) #32	GUCY1A2 (ENSBTAG00000044144) #34	CWF19L2 (ENSBTAG00000018629) #33	ENSBTAG00000052218	C15H11orf97 (ENSBTAG00000040449)	FUT4 (ENSBTAG00000038062)	PIWIL4 (ENSBTAG00000014910)
American bison	MODERN SPECIES	3343	BTG4 (ENSBBBG00000008974) #7	POU2AF1 (ENSBBBG00000008809) #8	POU2AF3 (ENSBBBG00000023988) #9	POU2AF2 (ENSBBBG00000006242) #10	ENSBBBG00000024000	ARHGAP20 (ENSBBBG00000024047) #11	FDX1 (ENSBBBG00000008813) #12	ENSBBBG00000024066	RDX (ENSBBBG00000008883) #13	ZC3H12C (ENSBBBG00000008823) #14	ENSBBBG00000006331	C11orf87 (ENSBBBG00000008885) #17	DDX10 (ENSBBBG00000024390) #19	EXPH5 (ENSBBBG00000008187) #20	POGLUT3 (ENSBBBG00000024456) #21	C11orf65 (ENSBBBG00000008188) #22	ATM (ENSBBBG00000006445) #24	NPAT (ENSBBBG00000000204) #26	ACAT1 (ENSBBBG00000000174) #27	CUL5 (ENSBBBG00000007718) #28	RAB39A (ENSBBBG00000006493) #29	ENSBBBG00000024767 #30	ENSBBBG00000024782	ELMOD1 (ENSBBBG00000024882) #31	ENSBBBG00000006571	ENSBBBG00000024915 #32
Siberian musk deer	MODERN SPECIES	1171	PPP2R1B (ENSMMSG00000014850)	SIK2 (ENSMMSG00000014968)	LAYN (ENSMMSG00000015012)	HOATZ (ENSMMSG00000015204)	ENSMMSG00000015239 #7	POU2AF1 (ENSMMSG00000015256) #8	POU2AF3 (ENSMMSG00000015266) #9	POU2AF2 (ENSMMSG00000015279) #10	ARHGAP20 (ENSMMSG00000015335) #11	FDX1 (ENSMMSG00000015450) #12	RDX (ENSMMSG00000015488) #13	ZC3H12C (ENSMMSG00000015575) #14	C11orf87 (ENSMMSG00000015615) #17	DDX10 (ENSMMSG00000015634) #19	POGLUT3 (ENSMMSG00000015736) #21	C11orf65 (ENSMMSG00000015860) #22	ENSMMSG00000015908	ENSMMSG00000015967 #24	NPAT (ENSMMSG00000016265) #26	ACAT1 (ENSMMSG00000016397) #27	CUL5 (ENSMMSG00000016450) #28	ENSMMSG00000016507	ENSMMSG00000016523 #29	SLC35F2 (ENSMMSG00000016541) #30
Camelidae	ANCESTRAL SPECIES	88	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34
Arabian camel	MODERN SPECIES	26	LAYN (ENSCDRG00005021931)	HOATZ (ENSCDRG00005021930)	BTG4 (ENSCDRG00005021928) #7	POU2AF1 (ENSCDRG00005021927) #8	ENSCDRG00005021926 #9	POU2AF2 (ENSCDRG00005021925) #10	ENSCDRG00005021923	ENSCDRG00005021922 #12	RDX (ENSCDRG00005021921) #13	ZC3H12C (ENSCDRG00005021920) #14	C11orf87 (ENSCDRG00005021919) #17	DDX10 (ENSCDRG00005021918) #19	ENSCDRG00005021917	EXPH5 (ENSCDRG00005021916) #20	POGLUT3 (ENSCDRG00005021915) #21	C11orf65 (ENSCDRG00005021913) #22	ATM (ENSCDRG00005021893) #24	NPAT (ENSCDRG00005021853) #26	ACAT1 (ENSCDRG00005021788) #27	CUL5 (ENSCDRG00005021645) #28	RAB39A (ENSCDRG00005021603) #29	SLC35F2 (ENSCDRG00005021464) #30	ELMOD1 (ENSCDRG00005021274) #31	ENSCDRG00005020956 #33	GUCY1A2 (ENSCDRG00005020590) #34	ENSCDRG00005020457	ENSCDRG00005020357 #11
Alpaca	MODERN SPECIES	1698																C11orf65 (ENSVPAG00000003234) #22	ATM (ENSVPAG00000003230) #24	NPAT (ENSVPAG00000003229) #26	ACAT1 (ENSVPAG00000003228) #27	CUL5 (ENSVPAG00000003227) #28
Suina	ANCESTRAL SPECIES	5	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000159114
Chacoan peccary	MODERN SPECIES	29	SIK2 (ENSCWAG00000003674)	LAYN (ENSCWAG00000003729)	HOATZ (ENSCWAG00000003924)	BTG4 (ENSCWAG00000003961) #7	POU2AF1 (ENSCWAG00000003996) #8	POU2AF3 (ENSCWAG00000004023) #9	POU2AF2 (ENSCWAG00000004067) #10	ARHGAP20 (ENSCWAG00000004131) #11	FDX1 (ENSCWAG00000004239) #12	RDX (ENSCWAG00000004280) #13	ZC3H12C (ENSCWAG00000004392) #14	C11orf87 (ENSCWAG00000004468) #17	DDX10 (ENSCWAG00000004510) #19	EXPH5 (ENSCWAG00000004712) #20	POGLUT3 (ENSCWAG00000004854) #21	C11orf65 (ENSCWAG00000004880) #22	ATM (ENSCWAG00000004934) #24	NPAT (ENSCWAG00000004989) #26	ACAT1 (ENSCWAG00000005023) #27	CUL5 (ENSCWAG00000005071) #28	RAB39A (ENSCWAG00000005118) #29	SLC35F2 (ENSCWAG00000005147) #30	ENSCWAG00000005234	ELMOD1 (ENSCWAG00000005287) #31	ALKBH8 (ENSCWAG00000005467) #32	CWF19L2 (ENSCWAG00000005525) #33	AASDHPPT (ENSCWAG00000005548) #35	KBTBD3 (ENSCWAG00000005570) #36	MSANTD4 (ENSCWAG00000005595) #37	GRIA4 (ENSCWAG00000005641)	ENSCWAG00000006028
Pig	MODERN SPECIES	17	SIK2 (ENSSSCG00000032941)	LAYN (ENSSSCG00000015022)	HOATZ (ENSSSCG00000015021)	BTG4 (ENSSSCG00000015020) #7	POU2AF1 (ENSSSCG00000015016) #8	POU2AF3 (ENSSSCG00000015019) #9	POU2AF2 (ENSSSCG00000015018) #10	ARHGAP20 (ENSSSCG00000015015) #11	FDX1 (ENSSSCG00000035945) #12	RDX (ENSSSCG00000015013) #13	ZC3H12C (ENSSSCG00000015014) #14	C11orf87 (ENSSSCG00000036943) #17	ENSSSCG00000015011	EXPH5 (ENSSSCG00000015010) #20	POGLUT3 (ENSSSCG00000015009) #21	C11orf65 (ENSSSCG00000015008) #22	ATM (ENSSSCG00000025606) #24	NPAT (ENSSSCG00000026959) #26	ACAT1 (ENSSSCG00000026153) #27	CUL5 (ENSSSCG00000029198) #28	ENSSSCG00000035345	RAB39A (ENSSSCG00000031723) #29	SLC35F2 (ENSSSCG00000015001) #30	ENSSSCG00000058217	SLN (ENSSSCG00000029651)	ELMOD1 (ENSSSCG00000015002) #31	ALKBH8 (ENSSSCG00000024628) #32	ENSSSCG00000056752	CWF19L2 (ENSSSCG00000028201) #33	KBTBD3 (ENSSSCG00000014999) #36	AASDHPPT (ENSSSCG00000014998) #35
Eulipotyphla	ANCESTRAL SPECIES	165																ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28
Hedgehog	MODERN SPECIES	4541																C11orf65 (ENSEEUG00000008706) #22	ATM (ENSEEUG00000007641) #24
Common shrew	MODERN SPECIES	10611																C11orf65 (ENSSARG00000005936) #22
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Primates	ANCESTRAL SPECIES		ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Haplorrhini	ANCESTRAL SPECIES		ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Simiiformes	ANCESTRAL SPECIES		ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.m #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.m #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Macaca	ANCESTRAL SPECIES	2	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.m #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00950000183066.a.a.b	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.m #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263493.a.b.a.a.a.a.a.a.b.b.b	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Crab-eating macaque	MODERN SPECIES	5	PPP2R1B (ENSMFAG00000046304)	SIK2 (ENSMFAG00000045653)	LAYN (ENSMFAG00000032480)	HOATZ (ENSMFAG00000036781)	BTG4 (ENSMFAG00000036753) #7	POU2AF1 (ENSMFAG00000042921) #8	ENSMFAG00000043291 #9	POU2AF2 (ENSMFAG00000034174) #10	ARHGAP20 (ENSMFAG00000036507) #11	FDX1 (ENSMFAG00000039761) #12	RDX (ENSMFAG00000031656) #13	ZC3H12C (ENSMFAG00000042068) #14	ENSMFAG00000040157 #17	DDX10 (ENSMFAG00000045808) #19	EXPH5 (ENSMFAG00000018860) #20	C11orf65 (ENSMFAG00000042308) #22	ATM (ENSMFAG00000004053) #24	NPAT (ENSMFAG00000034204) #26	ACAT1 (ENSMFAG00000044957) #27	CUL5 (ENSMFAG00000038493) #28	ENSMFAG00000057794	RAB39A (ENSMFAG00000043510) #29	SLC35F2 (ENSMFAG00000041696) #30	ENSMFAG00000054322	ENSMFAG00000054046	ELMOD1 (ENSMFAG00000039699) #31	ALKBH8 (ENSMFAG00000003178) #32	ENSMFAG00000064125	ENSMFAG00000038804 #33	ENSMFAG00000054943	GUCY1A2 (ENSMFAG00000034683) #34
Pig-tailed macaque	MODERN SPECIES	204	HOATZ (ENSMNEG00000038512)	BTG4 (ENSMNEG00000028670) #7	POU2AF1 (ENSMNEG00000042844) #8	POU2AF3 (ENSMNEG00000036284) #9	POU2AF2 (ENSMNEG00000044667) #10	ARHGAP20 (ENSMNEG00000042524) #11	FDX1 (ENSMNEG00000006503) #12	RDX (ENSMNEG00000042245) #13	ZC3H12C (ENSMNEG00000032663) #14	ENSMNEG00000033452	C11orf87 (ENSMNEG00000024831) #17	ENSMNEG00000042452 #18	DDX10 (ENSMNEG00000033513) #19	EXPH5 (ENSMNEG00000005435) #20	POGLUT3 (ENSMNEG00000030579) #21	C11orf65 (ENSMNEG00000031879) #22	ATM (ENSMNEG00000004901) #24	NPAT (ENSMNEG00000029307) #26	ACAT1 (ENSMNEG00000037425) #27	CUL5 (ENSMNEG00000031821) #28	RAB39A (ENSMNEG00000037136) #29	SLC35F2 (ENSMNEG00000041099) #30	SLN (ENSMNEG00000026545)	ELMOD1 (ENSMNEG00000039374) #31	ALKBH8 (ENSMNEG00000041672) #32	CWF19L2 (ENSMNEG00000038771) #33	ENSMNEG00000043288	ENSMNEG00000036279 #34	AASDHPPT (ENSMNEG00000032892) #35	KBTBD3 (ENSMNEG00000041894) #36	MSANTD4 (ENSMNEG00000028862) #37
Cercopithecinae_b	ANCESTRAL SPECIES	21	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.m #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Olive baboon	MODERN SPECIES	3	POU2AF1 (ENSPANG00000040104) #8	POU2AF3 (ENSPANG00000008131) #9	POU2AF2 (ENSPANG00000019123) #10	ARHGAP20 (ENSPANG00000008965) #11	ENSPANG00000045078	FDX1 (ENSPANG00000009432) #12	RDX (ENSPANG00000015381) #13	ZC3H12C (ENSPANG00000023930) #14	ENSPANG00000040556	ENSPANG00000044051 #17	ENSPANG00000043101	ENSPANG00000044773	DDX10 (ENSPANG00000015325) #19	EXPH5 (ENSPANG00000003385) #20	POGLUT3 (ENSPANG00000022853) #21	C11orf65 (ENSPANG00000051088) #22	ATM (ENSPANG00000019174) #24	NPAT (ENSPANG00000026022) #26	ACAT1 (ENSPANG00000010010) #27	CUL5 (ENSPANG00000007952) #28	RAB39A (ENSPANG00000044333) #29	SLC35F2 (ENSPANG00000007636) #30	ENSPANG00000038310	SLN (ENSPANG00000034548)	ELMOD1 (ENSPANG00000004866) #31	ALKBH8 (ENSPANG00000010011) #32	CWF19L2 (ENSPANG00000012746) #33	ENSPANG00000050440	ENSPANG00000046002	GUCY1A2 (ENSPANG00000006437) #34	AASDHPPT (ENSPANG00000019124) #35
Cercopithecinae_d	ANCESTRAL SPECIES	45	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.m #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Sooty mangabey	MODERN SPECIES	138	SIK2 (ENSCATG00000035649)	LAYN (ENSCATG00000042864)	HOATZ (ENSCATG00000012410)	BTG4 (ENSCATG00000021924) #7	POU2AF1 (ENSCATG00000039907) #8	POU2AF3 (ENSCATG00000035023) #9	POU2AF2 (ENSCATG00000039852) #10	ARHGAP20 (ENSCATG00000037266) #11	FDX1 (ENSCATG00000029996) #12	ENSCATG00000038708 #13	ZC3H12C (ENSCATG00000041641) #14	C11orf87 (ENSCATG00000016537) #17	DDX10 (ENSCATG00000028487) #19	EXPH5 (ENSCATG00000031656) #20	POGLUT3 (ENSCATG00000036542) #21	C11orf65 (ENSCATG00000042226) #22	ATM (ENSCATG00000039377) #24	NPAT (ENSCATG00000008696) #26	ACAT1 (ENSCATG00000029794) #27	CUL5 (ENSCATG00000034963) #28	RAB39A (ENSCATG00000020707) #29	SLC35F2 (ENSCATG00000038785) #30	SLN (ENSCATG00000013494)	ELMOD1 (ENSCATG00000011279) #31	ALKBH8 (ENSCATG00000035864) #32	CWF19L2 (ENSCATG00000044106) #33	ENSCATG00000022017	GUCY1A2 (ENSCATG00000037410) #34	AASDHPPT (ENSCATG00000043976) #35	KBTBD3 (ENSCATG00000044798) #36	MSANTD4 (ENSCATG00000030475) #37
Drill	MODERN SPECIES	905												ENSMLEG00000044120 #18	DDX10 (ENSMLEG00000044081) #19	EXPH5 (ENSMLEG00000031409) #20	POGLUT3 (ENSMLEG00000030293) #21	C11orf65 (ENSMLEG00000036417) #22	ATM (ENSMLEG00000035852) #24	NPAT (ENSMLEG00000039127) #26	ACAT1 (ENSMLEG00000026923) #27	CUL5 (ENSMLEG00000038735) #28	RAB39A (ENSMLEG00000034160) #29	SLC35F2 (ENSMLEG00000031766) #30	SLN (ENSMLEG00000023787)	ELMOD1 (ENSMLEG00000039814) #31	ALKBH8 (ENSMLEG00000029986) #32	CWF19L2 (ENSMLEG00000035335) #33	ENSMLEG00000035787
Vervet Monkey	MODERN SPECIES		HOATZ (ENSCSAG00000002907)	BTG4 (ENSCSAG00000002908) #7	ENSCSAG00000002909	POU2AF1 (ENSCSAG00000002913) #8	POU2AF3 (ENSCSAG00000002915) #9	POU2AF2 (ENSCSAG00000002917) #10	ARHGAP20 (ENSCSAG00000002920) #11	FDX1 (ENSCSAG00000002924) #12	RDX (ENSCSAG00000002938) #13	ZC3H12C (ENSCSAG00000002945) #14	C11orf87 (ENSCSAG00000000599) #17	ENSCSAG00000000600	DDX10 (ENSCSAG00000002948) #19	EXPH5 (ENSCSAG00000002951) #20	POGLUT3 (ENSCSAG00000002956) #21	C11orf65 (ENSCSAG00000002961) #22	ATM (ENSCSAG00000002971) #24	NPAT (ENSCSAG00000002976) #26	ACAT1 (ENSCSAG00000002996) #27	CUL5 (ENSCSAG00000003003) #28	RAB39A (ENSCSAG00000003008) #29	SLC35F2 (ENSCSAG00000003013) #30	SLN (ENSCSAG00000000601)	ELMOD1 (ENSCSAG00000003018) #31	ENSCSAG00000003020	ALKBH8 (ENSCSAG00000003027) #32	CWF19L2 (ENSCSAG00000003032) #33	GUCY1A2 (ENSCSAG00000003037) #34	ENSCSAG00000000602	AASDHPPT (ENSCSAG00000003042) #35	KBTBD3 (ENSCSAG00000003044) #36
Rhinopithecus	ANCESTRAL SPECIES	194	ENSGT00390000003821	ENSGT00390000015467	ENSGT00940000157017.b	ENSGT00940000160899	ENSGT00390000000289	ENSGT00940000161021	ENSGT00390000013329	ENSGT00940000154355.f.g.a	ENSGT00940000161439	ENSGT00950000183110.b.a	ENSGT00390000013841	ENSGT00390000012905 #17	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32
Golden snub-nosed monkey	MODERN SPECIES	917																C11orf65 (ENSRROG00000042578) #22	ENSRROG00000040216	ATM (ENSRROG00000039466) #24	NPAT (ENSRROG00000042980) #26	ACAT1 (ENSRROG00000035049) #27	CUL5 (ENSRROG00000031340) #28	RAB39A (ENSRROG00000028908) #29	SLC35F2 (ENSRROG00000041907) #30	ENSRROG00000005684	ELMOD1 (ENSRROG00000026242) #31	ALKBH8 (ENSRROG00000039484) #32
Black snub-nosed monkey	MODERN SPECIES	1759													DDX10 (ENSRBIG00000040612) #19	EXPH5 (ENSRBIG00000039020) #20	POGLUT3 (ENSRBIG00000028735) #21	C11orf65 (ENSRBIG00000037574) #22	ATM (ENSRBIG00000034107) #24	NPAT (ENSRBIG00000036504) #26	ACAT1 (ENSRBIG00000020193) #27	CUL5 (ENSRBIG00000031716) #28	RAB39A (ENSRBIG00000004655) #29	SLC35F2 (ENSRBIG00000040852) #30	SLN (ENSRBIG00000027162)	ELMOD1 (ENSRBIG00000007093) #31	ALKBH8 (ENSRBIG00000032575) #32
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.k #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000155315.n	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35
Hominidae	ANCESTRAL SPECIES	1	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00410000028767	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.k #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000155315.n	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.k #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000155315.n	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.k #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Pan	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b.k #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00910000147346 #18	ENSGT00550000074980.a #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01090000260451	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00910000148557	ENSGT00940000155627 #33	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Bonobo	MODERN SPECIES	2	LAYN (ENSPPAG00000041584)	HOATZ (ENSPPAG00000028463)	BTG4 (ENSPPAG00000043008) #7	POU2AF1 (ENSPPAG00000027335) #8	POU2AF3 (ENSPPAG00000030384) #9	POU2AF2 (ENSPPAG00000037435) #10	ARHGAP20 (ENSPPAG00000039270) #11	ENSPPAG00000032618 #12	RDX (ENSPPAG00000040677) #13	ZC3H12C (ENSPPAG00000041914) #14	C11orf87 (ENSPPAG00000001984) #17	ENSPPAG00000029102 #18	DDX10 (ENSPPAG00000035222) #19	EXPH5 (ENSPPAG00000004529) #20	POGLUT3 (ENSPPAG00000029797) #21	C11orf65 (ENSPPAG00000031914) #22	ATM (ENSPPAG00000027747) #24	NPAT (ENSPPAG00000043838) #26	ACAT1 (ENSPPAG00000035088) #27	CUL5 (ENSPPAG00000034615) #28	RAB39A (ENSPPAG00000043361) #29	SLC35F2 (ENSPPAG00000011742) #30	ENSPPAG00000036076	ELMOD1 (ENSPPAG00000041230) #31	ALKBH8 (ENSPPAG00000012183) #32	ENSPPAG00000042965	CWF19L2 (ENSPPAG00000023443) #33	ENSPPAG00000037738	ENSPPAG00000043185 #34	AASDHPPT (ENSPPAG00000030173) #35	KBTBD3 (ENSPPAG00000043957) #36
Chimpanzee	MODERN SPECIES	2	LAYN (ENSPTRG00000028398)	HOATZ (ENSPTRG00000004266)	BTG4 (ENSPTRG00000004265) #7	POU2AF1 (ENSPTRG00000004264) #8	POU2AF3 (ENSPTRG00000033733) #9	POU2AF2 (ENSPTRG00000004263) #10	ARHGAP20 (ENSPTRG00000004261) #11	FDX1 (ENSPTRG00000004260) #12	RDX (ENSPTRG00000004259) #13	ZC3H12C (ENSPTRG00000050494) #14	C11H11orf87 (ENSPTRG00000048760) #17	ENSPTRG00000044009 #18	DDX10 (ENSPTRG00000004256) #19	EXPH5 (ENSPTRG00000004254) #20	POGLUT3 (ENSPTRG00000004253) #21	C11H11orf65 (ENSPTRG00000004252) #22	ATM (ENSPTRG00000004250) #24	NPAT (ENSPTRG00000004248) #26	ACAT1 (ENSPTRG00000004247) #27	CUL5 (ENSPTRG00000004246) #28	RAB39A (ENSPTRG00000049354) #29	SLC35F2 (ENSPTRG00000004244) #30	SLN (ENSPTRG00000048017)	ELMOD1 (ENSPTRG00000004241) #31	ALKBH8 (ENSPTRG00000004240) #32	ENSPTRG00000047347	CWF19L2 (ENSPTRG00000004239) #33	ENSPTRG00000045119	GUCY1A2 (ENSPTRG00000004238) #34	AASDHPPT (ENSPTRG00000004236) #35	KBTBD3 (ENSPTRG00000004235) #36
Human	MODERN SPECIES	2	SIK2 (ENSG00000170145)	LAYN (ENSG00000204381)	HOATZ (ENSG00000183644)	BTG4 (ENSG00000137707) #7	POU2AF1 (ENSG00000110777) #8	POU2AF3 (ENSG00000214290) #9	POU2AF2 (ENSG00000150750) #10	ARHGAP20 (ENSG00000137727) #11	FDX1 (ENSG00000137714) #12	ZC3H12C (ENSG00000149289) #14	RDX (ENSG00000137710) #13	C11orf87 (ENSG00000185742) #17	DDX10 (ENSG00000178105) #19	EXPH5 (ENSG00000110723) #20	POGLUT3 (ENSG00000178202) #21	C11orf65 (ENSG00000166323) #22	ATM (ENSG00000149311) #24	NPAT (ENSG00000149308) #26	ACAT1 (ENSG00000075239) #27	CUL5 (ENSG00000166266) #28	RAB39A (ENSG00000179331) #29	SLC35F2 (ENSG00000110660) #30	SLN (ENSG00000170290)	ELMOD1 (ENSG00000110675) #31	ALKBH8 (ENSG00000137760) #32	CWF19L2 (ENSG00000152404) #33	GUCY1A2 (ENSG00000152402) #34	AASDHPPT (ENSG00000149313) #35	KBTBD3 (ENSG00000182359) #36	MSANTD4 (ENSG00000170903) #37	GRIA4 (ENSG00000152578)
Orangutan	MODERN SPECIES	2	HOATZ (ENSPPYG00000034861)	BTG4 (ENSPPYG00000003860) #7	POU2AF1 (ENSPPYG00000003859) #8	ENSPPYG00000003858 #9	ENSPPYG00000003857	POU2AF2 (ENSPPYG00000003856) #10	ARHGAP20 (ENSPPYG00000003854) #11	FDX1 (ENSPPYG00000003853) #12	RDX (ENSPPYG00000003852) #13	ZC3H12C (ENSPPYG00000003851) #14	ENSPPYG00000035153	C11H11orf87 (ENSPPYG00000003850) #17	DDX10 (ENSPPYG00000003849) #19	EXPH5 (ENSPPYG00000040017) #20	POGLUT3 (ENSPPYG00000003847) #21	C11orf65 (ENSPPYG00000003846) #22	ATM (ENSPPYG00000003845) #24	NPAT (ENSPPYG00000003844) #26	ACAT1 (ENSPPYG00000003843) #27	CUL5 (ENSPPYG00000003842) #28	RAB39A (ENSPPYG00000003841) #29	SLC35F2 (ENSPPYG00000003840) #30	SLN (ENSPPYG00000003837)	ENSPPYG00000003836	ELMOD1 (ENSPPYG00000003835) #31	ALKBH8 (ENSPPYG00000003834) #32	ENSPPYG00000034618	CWF19L2 (ENSPPYG00000003833) #33	GUCY1A2 (ENSPPYG00000003832) #34	AASDHPPT (ENSPPYG00000003831) #35	KBTBD3 (ENSPPYG00000032968) #36
Gibbon	MODERN SPECIES	5	BTG4 (ENSNLEG00000007257) #7	POU2AF1 (ENSNLEG00000036228) #8	POU2AF3 (ENSNLEG00000007254) #9	ENSNLEG00000019236	POU2AF2 (ENSNLEG00000007253) #10	ARHGAP20 (ENSNLEG00000007251) #11	FDX1 (ENSNLEG00000030050) #12	RDX (ENSNLEG00000007247) #13	ZC3H12C (ENSNLEG00000029829) #14	ENSNLEG00000031364	C11orf87 (ENSNLEG00000028259) #17	ENSNLEG00000007244 #18	DDX10 (ENSNLEG00000007242) #19	EXPH5 (ENSNLEG00000007241) #20	POGLUT3 (ENSNLEG00000007238) #21	C11orf65 (ENSNLEG00000007234) #22	ATM (ENSNLEG00000007230) #24	NPAT (ENSNLEG00000007228) #26	ACAT1 (ENSNLEG00000007227) #27	CUL5 (ENSNLEG00000007226) #28	RAB39A (ENSNLEG00000028669) #29	ENSNLEG00000019235	SLC35F2 (ENSNLEG00000007222) #30	ENSNLEG00000030733	SLN (ENSNLEG00000034578)	ELMOD1 (ENSNLEG00000007218) #31	ALKBH8 (ENSNLEG00000007217) #32	CWF19L2 (ENSNLEG00000007213) #33	ENSNLEG00000034019	ENSNLEG00000027810	ENSNLEG00000007212 #34
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a.r #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627.a.a #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000164349
Cebidae	ANCESTRAL SPECIES		ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a.r #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627.a.a #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000164349
Cebidae_a	ANCESTRAL SPECIES	22	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a.r #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627.a.a #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000164349
Bolivian squirrel monkey	MODERN SPECIES	50	LAYN (ENSSBOG00000025374)	ENSSBOG00000035946	HOATZ (ENSSBOG00000028039)	BTG4 (ENSSBOG00000000915) #7	POU2AF1 (ENSSBOG00000021452) #8	POU2AF3 (ENSSBOG00000026595) #9	POU2AF2 (ENSSBOG00000009205) #10	ARHGAP20 (ENSSBOG00000019355) #11	ENSSBOG00000022685 #12	RDX (ENSSBOG00000031575) #13	ZC3H12C (ENSSBOG00000025582) #14	C11orf87 (ENSSBOG00000010527) #17	DDX10 (ENSSBOG00000022735) #19	EXPH5 (ENSSBOG00000028131) #20	POGLUT3 (ENSSBOG00000028643) #21	C11orf65 (ENSSBOG00000033968) #22	ATM (ENSSBOG00000030147) #24	ENSSBOG00000030945	NPAT (ENSSBOG00000021814) #26	ACAT1 (ENSSBOG00000029551) #27	CUL5 (ENSSBOG00000033575) #28	RAB39A (ENSSBOG00000018646) #29	SLC35F2 (ENSSBOG00000029721) #30	ELMOD1 (ENSSBOG00000031365) #31	ALKBH8 (ENSSBOG00000031504) #32	CWF19L2 (ENSSBOG00000033647) #33	GUCY1A2 (ENSSBOG00000020105) #34	AASDHPPT (ENSSBOG00000014423) #35	KBTBD3 (ENSSBOG00000024589) #36	MSANTD4 (ENSSBOG00000031639) #37	GRIA4 (ENSSBOG00000025256)
Capuchin	MODERN SPECIES	194										FDX1 (ENSCCAG00000024262) #12	RDX (ENSCCAG00000036737) #13	ZC3H12C (ENSCCAG00000022395) #14	DDX10 (ENSCCAG00000024209) #19	EXPH5 (ENSCCAG00000026428) #20	ENSCCAG00000002921 #21	C11orf65 (ENSCCAG00000036769) #22	ATM (ENSCCAG00000028598) #24	NPAT (ENSCCAG00000026452) #26	ACAT1 (ENSCCAG00000023713) #27	CUL5 (ENSCCAG00000026297) #28	RAB39A (ENSCCAG00000028849) #29	SLC35F2 (ENSCCAG00000021095) #30	ELMOD1 (ENSCCAG00000010863) #31	ALKBH8 (ENSCCAG00000036485) #32	ENSCCAG00000034828 #33	GUCY1A2 (ENSCCAG00000031034) #34
Marmoset	MODERN SPECIES	2	POU2AF2 (ENSCJAG00000010442) #10	ARHGAP20 (ENSCJAG00000010405) #11	ENSCJAG00000085488	FDX1 (ENSCJAG00000082157) #12	ENSCJAG00000085235	RDX (ENSCJAG00000010343) #13	ENSCJAG00000038562	ZC3H12C (ENSCJAG00000082470) #14	ENSCJAG00000042932	C11orf87 (ENSCJAG00000043178) #17	ENSCJAG00000083206	ENSCJAG00000061427	DDX10 (ENSCJAG00000010281) #19	EXPH5 (ENSCJAG00000042417) #20	POGLUT3 (ENSCJAG00000042526) #21	C11orf65 (ENSCJAG00000010238) #22	ATM (ENSCJAG00000010159) #24	NPAT (ENSCJAG00000010132) #26	ENSCJAG00000041111	CUL5 (ENSCJAG00000010059) #28	RAB39A (ENSCJAG00000010058) #29	SLC35F2 (ENSCJAG00000038166) #30	ENSCJAG00000076011	ELMOD1 (ENSCJAG00000009974) #31	ENSCJAG00000078009	ALKBH8 (ENSCJAG00000009957) #32	ENSCJAG00000034789	CWF19L2 (ENSCJAG00000009951) #33	ENSCJAG00000077514	GUCY1A2 (ENSCJAG00000009948) #34	ENSCJAG00000084129
Mas night monkey	MODERN SPECIES	525												C11orf87 (ENSANAG00000031136) #17	DDX10 (ENSANAG00000020864) #19	EXPH5 (ENSANAG00000019766) #20	POGLUT3 (ENSANAG00000022448) #21	C11orf65 (ENSANAG00000031891) #22	ATM (ENSANAG00000023573) #24	NPAT (ENSANAG00000024748) #26	ACAT1 (ENSANAG00000028971) #27	CUL5 (ENSANAG00000024872) #28	ENSANAG00000024678	RAB39A (ENSANAG00000032503) #29
Tarsier	MODERN SPECIES	3816															KDELC2 (ENSTSYG00000001384) #21	CUNH11orf65 (ENSTSYG00000001893) #22	ATM (ENSTSYG00000009678) #24	NPAT (ENSTSYG00000009647) #26	ENSTSYG00000004258	ACAT1 (ENSTSYG00000012639) #27	CUL5 (ENSTSYG00000009372) #28	ENSTSYG00000029273
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Lemuriformes_a	ANCESTRAL SPECIES	22	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00940000168617.e	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00390000003248.a.a.a.b	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Coquerels sifaka	MODERN SPECIES	760	ALG9 (ENSPCOG00000013221)	PPP2R1B (ENSPCOG00000022343)	SIK2 (ENSPCOG00000010314)	LAYN (ENSPCOG00000024796)	HOATZ (ENSPCOG00000015833)	BTG4 (ENSPCOG00000025062) #7	POU2AF1 (ENSPCOG00000015832) #8	POU2AF3 (ENSPCOG00000004372) #9	POU2AF2 (ENSPCOG00000023153) #10	ARHGAP20 (ENSPCOG00000018878) #11	FDX1 (ENSPCOG00000012522) #12	ZC3H12C (ENSPCOG00000024737) #14	DDX10 (ENSPCOG00000020289) #19	EXPH5 (ENSPCOG00000018196) #20	POGLUT3 (ENSPCOG00000020286) #21	C11orf65 (ENSPCOG00000016836) #22	ENSPCOG00000014064	ATM (ENSPCOG00000020514) #24	NPAT (ENSPCOG00000016278) #26	ACAT1 (ENSPCOG00000023465) #27	ENSPCOG00000028494	CUL5 (ENSPCOG00000025380) #28	RAB39A (ENSPCOG00000019017) #29	SLC35F2 (ENSPCOG00000008427) #30	ELMOD1 (ENSPCOG00000023055) #31	ALKBH8 (ENSPCOG00000022645) #32	CWF19L2 (ENSPCOG00000018032) #33	ENSPCOG00000015897	GUCY1A2 (ENSPCOG00000016375) #34	AASDHPPT (ENSPCOG00000014297) #35	KBTBD3 (ENSPCOG00000021176) #36
Greater bamboo lemur	MODERN SPECIES	321													DDX10 (ENSPSMG00000011533) #19	EXPH5 (ENSPSMG00000011488) #20	POGLUT3 (ENSPSMG00000011480) #21	C11orf65 (ENSPSMG00000011473) #22	ENSPSMG00000011468	ATM (ENSPSMG00000011431) #24	NPAT (ENSPSMG00000011327) #26	ACAT1 (ENSPSMG00000011279) #27	CUL5 (ENSPSMG00000011252) #28	RAB39A (ENSPSMG00000011192) #29	SLC35F2 (ENSPSMG00000011175) #30	ENSPSMG00000011144	ELMOD1 (ENSPSMG00000011131) #31	ALKBH8 (ENSPSMG00000011105) #32	CWF19L2 (ENSPSMG00000011079) #33	GUCY1A2 (ENSPSMG00000011041) #34
Mouse lemur	MODERN SPECIES	27	SIK2 (ENSMICG00000015724)	LAYN (ENSMICG00000015658)	HOATZ (ENSMICG00000032147)	BTG4 (ENSMICG00000001293) #7	POU2AF1 (ENSMICG00000034665) #8	POU2AF3 (ENSMICG00000032454) #9	POU2AF2 (ENSMICG00000028357) #10	ARHGAP20 (ENSMICG00000029239) #11	ENSMICG00000002989	FDX1 (ENSMICG00000007112) #12	RDX (ENSMICG00000011469) #13	ZC3H12C (ENSMICG00000011455) #14	DDX10 (ENSMICG00000035071) #19	EXPH5 (ENSMICG00000044911) #20	POGLUT3 (ENSMICG00000003463) #21	C11orf65 (ENSMICG00000003461) #22	ENSMICG00000001104	ATM (ENSMICG00000013655) #24	NPAT (ENSMICG00000000386) #26	ACAT1 (ENSMICG00000000380) #27	ENSMICG00000028194	CUL5 (ENSMICG00000000376) #28	RAB39A (ENSMICG00000045554) #29	ENSMICG00000038149	SLC35F2 (ENSMICG00000000245) #30	ELMOD1 (ENSMICG00000001050) #31	ALKBH8 (ENSMICG00000001044) #32	CWF19L2 (ENSMICG00000010853) #33	GUCY1A2 (ENSMICG00000004925) #34	ENSMICG00000035020	ENSMICG00000036566
Bushbaby	MODERN SPECIES	201	POU2AF1 (ENSOGAG00000012629) #8	ENSOGAG00000024081 #9	POU2AF2 (ENSOGAG00000012625) #10	ARHGAP20 (ENSOGAG00000015926) #11	ENSOGAG00000024799	ENSOGAG00000033257	FDX1 (ENSOGAG00000030160) #12	RDX (ENSOGAG00000013225) #13	ENSOGAG00000032801	ZC3H12C (ENSOGAG00000013223) #14	ENSOGAG00000034206	C11orf87 (ENSOGAG00000010609) #17	DDX10 (ENSOGAG00000010962) #19	EXPH5 (ENSOGAG00000024459) #20	POGLUT3 (ENSOGAG00000010948) #21	C11orf65 (ENSOGAG00000010944) #22	ATM (ENSOGAG00000017247) #24	NPAT (ENSOGAG00000017246) #26	ACAT1 (ENSOGAG00000017245) #27	CUL5 (ENSOGAG00000007198) #28
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Tree shrew	MODERN SPECIES	3402													DDX10 (ENSTBEG00000006321) #19	EXPH5 (ENSTBEG00000005282) #20	POGLUT3 (ENSTBEG00000004430) #21	C11orf65 (ENSTBEG00000003732) #22	ATM (ENSTBEG00000008719) #24	NPAT (ENSTBEG00000008227) #26	ACAT1 (ENSTBEG00000007233) #27	CUL5 (ENSTBEG00000006094) #28
Glires	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00390000008536	ENSGT00940000158563 #32	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000162428.b	ENSGT00940000159114
Rabbit	MODERN SPECIES		ENSOCUG00000017811	ENSOCUG00000039274	ENSOCUG00000030051	ARHGAP20 (ENSOCUG00000013948) #11	ENSOCUG00000031937	ENSOCUG00000017826 #12	ENSOCUG00000032740	RDX (ENSOCUG00000014267) #13	ZC3H12C (ENSOCUG00000005283) #14	ENSOCUG00000006972	C11orf87 (ENSOCUG00000001196) #17	DDX10 (ENSOCUG00000003843) #19	EXPH5 (ENSOCUG00000016757) #20	POGLUT3 (ENSOCUG00000014539) #21	ENSOCUG00000035350	C11orf65 (ENSOCUG00000000044) #22	ATM (ENSOCUG00000014663) #24	ACAT1 (ENSOCUG00000002882) #27	CUL5 (ENSOCUG00000010907) #28	RAB39A (ENSOCUG00000021112) #29	SLC35F2 (ENSOCUG00000011878) #30	ENSOCUG00000011876	ELMOD1 (ENSOCUG00000011869) #31	CWF19L2 (ENSOCUG00000025398) #33	ENSOCUG00000038405	GUCY1A2 (ENSOCUG00000004490) #34	ENSOCUG00000036599	ENSOCUG00000023190	AASDHPPT (ENSOCUG00000000231) #35	KBTBD3 (ENSOCUG00000000230) #36	MSANTD4 (ENSOCUG00000022457) #37
Pika	MODERN SPECIES	3769																ENSOPRG00000008130 #22
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Muroidea	ANCESTRAL SPECIES	29	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00950000182989.A
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00950000182989.A
Northern American deer mouse	MODERN SPECIES	20	Layn (ENSPEMG00000015633)	Hoatz (ENSPEMG00000013466)	Btg4 (ENSPEMG00000030483) #7	Gm32742 (ENSPEMG00000010480)	Pou2af1 (ENSPEMG00000030398) #8	Pou2af3 (ENSPEMG00000024931) #9	Pou2af2 (ENSPEMG00000000333) #10	Arhgap20 (ENSPEMG00000020012) #11	Fdx1 (ENSPEMG00000013678) #12	ENSPEMG00000011636 #13	Zc3h12c (ENSPEMG00000008502) #14	AI593442 (ENSPEMG00000007289) #17	Ddx10 (ENSPEMG00000017492) #19	Exph5 (ENSPEMG00000015667) #20	Poglut3 (ENSPEMG00000012786) #21	4930550C14Rik (ENSPEMG00000012072) #22	ENSPEMG00000013972 #24	Npat (ENSPEMG00000018601) #26	Acat1 (ENSPEMG00000014134) #27	Cul5 (ENSPEMG00000008829) #28	ENSPEMG00000025940	Rab39 (ENSPEMG00000030526) #29	Slc35f2 (ENSPEMG00000002299) #30	Sln (ENSPEMG00000030736)	Elmod1 (ENSPEMG00000009376) #31	Tnfaip8l3 (ENSPEMG00000027588)	Cyp19a1 (ENSPEMG00000020167)	Gldn (ENSPEMG00000020076)	Dmxl2 (ENSPEMG00000000722)	ENSPEMG00000015602	Idh3a (ENSPEMG00000012115)
Prairie vole	MODERN SPECIES	13	Layn (ENSMOCG00000010606)	Hoatz (ENSMOCG00000022010)	Btg4 (ENSMOCG00000001585) #7	Gm32742 (ENSMOCG00000012210)	Pou2af1 (ENSMOCG00000016520) #8	Pou2af3 (ENSMOCG00000017209) #9	Pou2af2 (ENSMOCG00000018556) #10	Arhgap20 (ENSMOCG00000022072) #11	Fdx1 (ENSMOCG00000020431) #12	Rdx (ENSMOCG00000022444) #13	Zc3h12c (ENSMOCG00000020090) #14	AI593442 (ENSMOCG00000022121) #17	Ddx10 (ENSMOCG00000009915) #19	Exph5 (ENSMOCG00000014944) #20	Poglut3 (ENSMOCG00000005032) #21	4930550C14Rik (ENSMOCG00000012412) #22	Atm (ENSMOCG00000020839) #24	Npat (ENSMOCG00000017269) #26	Acat1 (ENSMOCG00000014773) #27	Cul5 (ENSMOCG00000008916) #28	Rab39 (ENSMOCG00000015785) #29	Slc35f2 (ENSMOCG00000018231) #30	Sln (ENSMOCG00000006659)	Elmod1 (ENSMOCG00000014424) #31	Tnfaip8l3 (ENSMOCG00000009486)	Cyp19a1 (ENSMOCG00000007758)	Gldn (ENSMOCG00000019766)	Dmxl2 (ENSMOCG00000013445)	ENSMOCG00000013279	Cib2 (ENSMOCG00000016361)	Idh3a (ENSMOCG00000005720)
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00950000182989.A.k
Golden Hamster	MODERN SPECIES	635	Layn (ENSMAUG00000008603)	Hoatz (ENSMAUG00000011164)	Btg4 (ENSMAUG00000019040) #7	Gm32742 (ENSMAUG00000010291)	Pou2af1 (ENSMAUG00000011912) #8	Pou2af3 (ENSMAUG00000001055) #9	Pou2af2 (ENSMAUG00000020649) #10	Arhgap20 (ENSMAUG00000021629) #11	Fdx1 (ENSMAUG00000021874) #12	Rdx (ENSMAUG00000014149) #13	Zc3h12c (ENSMAUG00000020412) #14	AI593442 (ENSMAUG00000009477) #17	ENSMAUG00000009113	Exph5 (ENSMAUG00000006496) #20	Poglut3 (ENSMAUG00000007585) #21	4930550C14Rik (ENSMAUG00000021850) #22	Atm (ENSMAUG00000011714) #24	Npat (ENSMAUG00000011129) #26	ENSMAUG00000010771	Acat1 (ENSMAUG00000011317) #27	Cul5 (ENSMAUG00000010783) #28	Rab39 (ENSMAUG00000001151) #29	ENSMAUG00000010176	Slc35f2 (ENSMAUG00000009323) #30	Sln (ENSMAUG00000010169)	Elmod1 (ENSMAUG00000009403) #31	Tnfaip8l3 (ENSMAUG00000013426)	Cyp19a1 (ENSMAUG00000014665)	Gldn (ENSMAUG00000009445)	Dmxl2 (ENSMAUG00000008761)	Sh2d7 (ENSMAUG00000014940)
Chinese hamster chok1gshd	MODERN SPECIES	284	ENSCGRG00001019269	Btg4 (ENSCGRG00001016420) #7	Gm32742 (ENSCGRG00001024988)	Pou2af1 (ENSCGRG00001016957) #8	Pou2af3 (ENSCGRG00001015209) #9	Pou2af2 (ENSCGRG00001022704) #10	Arhgap20 (ENSCGRG00001012851) #11	ENSCGRG00001023421	Fdx1 (ENSCGRG00001020345) #12	Rdx (ENSCGRG00001022782) #13	Zc3h12c (ENSCGRG00001013672) #14	AI593442 (ENSCGRG00001006838) #17	Ddx10 (ENSCGRG00001007099) #19	Exph5 (ENSCGRG00001023400) #20	Poglut3 (ENSCGRG00001022653) #21	4930550C14Rik (ENSCGRG00001024526) #22	Atm (ENSCGRG00001019797) #24	Npat (ENSCGRG00001012884) #26	Acat1 (ENSCGRG00001005942) #27	Cul5 (ENSCGRG00001024408) #28	Rab39 (ENSCGRG00001013530) #29	Slc35f2 (ENSCGRG00001007885) #30	Sln (ENSCGRG00001023383)	Elmod1 (ENSCGRG00001012240) #31	Tnfaip8l3 (ENSCGRG00001005171)	Cyp19a1 (ENSCGRG00001015094)	Gldn (ENSCGRG00001010595)	Dmxl2 (ENSCGRG00001007276)	Sh2d7 (ENSCGRG00001024760)	Cib2 (ENSCGRG00001020357)	ENSCGRG00001015727
Murinae	ANCESTRAL SPECIES	3	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Mus	ANCESTRAL SPECIES	4	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Mouse	MODERN SPECIES	18	Layn (ENSMUSG00000060594)	Btg4 (ENSMUSG00000032056) #7	Hoatz (ENSMUSG00000032057)	Gm32742 (ENSMUSG00000110266)	Pou2af1 (ENSMUSG00000032053) #8	Pou2af3 (ENSMUSG00000079559) #9	Pou2af2 (ENSMUSG00000036027) #10	Arhgap20 (ENSMUSG00000053199) #11	Fdx1 (ENSMUSG00000032051) #12	Rdx (ENSMUSG00000032050) #13	Zc3h12c (ENSMUSG00000035164) #14	AI593442 (ENSMUSG00000078307) #17	Ddx10 (ENSMUSG00000053289) #19	Exph5 (ENSMUSG00000034584) #20	Poglut3 (ENSMUSG00000034487) #21	4930550C14Rik (ENSMUSG00000005131) #22	Atm (ENSMUSG00000034218) #24	Npat (ENSMUSG00000033054) #26	Acat1 (ENSMUSG00000032047) #27	Cul5 (ENSMUSG00000032030) #28	Rab39 (ENSMUSG00000055069) #29	Slc35f2 (ENSMUSG00000042195) #30	Sln (ENSMUSG00000042045)	Elmod1 (ENSMUSG00000041986) #31	Tnfaip8l3 (ENSMUSG00000074345)	Cyp19a1 (ENSMUSG00000032274)	Gldn (ENSMUSG00000046167)	Dmxl2 (ENSMUSG00000041268)	Sh2d7 (ENSMUSG00000046460)	Cib2 (ENSMUSG00000037493)	Idh3a (ENSMUSG00000032279)
Mus_C	ANCESTRAL SPECIES	8	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
spretus	MODERN SPECIES	18	Layn (MGP_SPRETEiJ_G0033340)	Hoatz (MGP_SPRETEiJ_G0033341)	Btg4 (MGP_SPRETEiJ_G0033342) #7	Pou2af1 (MGP_SPRETEiJ_G0033343) #8	Pou2af3 (MGP_SPRETEiJ_G0033344) #9	Pou2af2 (MGP_SPRETEiJ_G0033345) #10	MGP_SPRETEiJ_G0033346	Arhgap20 (MGP_SPRETEiJ_G0033347) #11	Fdx1 (MGP_SPRETEiJ_G0033348) #12	Rdx (MGP_SPRETEiJ_G0033349) #13	Zc3h12c (MGP_SPRETEiJ_G0033350) #14	AI593442 (MGP_SPRETEiJ_G0033351) #17	Ddx10 (MGP_SPRETEiJ_G0033352) #19	Exph5 (MGP_SPRETEiJ_G0033353) #20	Poglut3 (MGP_SPRETEiJ_G0033354) #21	4930550C14Rik (MGP_SPRETEiJ_G0033355) #22	MGP_SPRETEiJ_G0033356 #24	Npat (MGP_SPRETEiJ_G0033357) #26	Acat1 (MGP_SPRETEiJ_G0033358) #27	Cul5 (MGP_SPRETEiJ_G0033359) #28	Rab39 (MGP_SPRETEiJ_G0033360) #29	Slc35f2 (MGP_SPRETEiJ_G0033361) #30	Sln (MGP_SPRETEiJ_G0033362)	Elmod1 (MGP_SPRETEiJ_G0033363) #31	Tnfaip8l3 (MGP_SPRETEiJ_G0033364)	Cyp19a1 (MGP_SPRETEiJ_G0033365)	Gldn (MGP_SPRETEiJ_G0033366)	Dmxl2 (MGP_SPRETEiJ_G0033367)	MGP_SPRETEiJ_G0033368	Cib2 (MGP_SPRETEiJ_G0033369)	Idh3a (MGP_SPRETEiJ_G0033370)
Steppe mouse	MODERN SPECIES	3294				Fdx1 (ENSMSIG00000023526) #12	ENSMSIG00000023562	Rdx (ENSMSIG00000023566) #13	Zc3h12c (ENSMSIG00000023596) #14	ENSMSIG00000002067	AI593442 (ENSMSIG00000002076) #17	ENSMSIG00000002094	Ddx10 (ENSMSIG00000002113) #19	ENSMSIG00000002160	ENSMSIG00000002169	Exph5 (ENSMSIG00000002225) #20	Poglut3 (ENSMSIG00000002258) #21	4930550C14Rik (ENSMSIG00000002342) #22	Atm (ENSMSIG00000002482) #24	Npat (ENSMSIG00000003045) #26	ENSMSIG00000003120 #28	Rab39 (ENSMSIG00000003361) #29	Slc35f2 (ENSMSIG00000003375) #30	Sln (ENSMSIG00000003398)	Elmod1 (ENSMSIG00000003422) #31	Tnfaip8l3 (ENSMSIG00000003481)	Cyp19a1 (ENSMSIG00000003500)	ENSMSIG00000003540	Gldn (ENSMSIG00000003561)	Dmxl2 (ENSMSIG00000003612)	ENSMSIG00000003851	Cib2 (ENSMSIG00000003889)	ENSMSIG00000003928
Ryukyu mouse	MODERN SPECIES	18	Sik2 (MGP_CAROLIEiJ_G0032200)	Layn (MGP_CAROLIEiJ_G0032201)	Hoatz (MGP_CAROLIEiJ_G0032202)	Btg4 (MGP_CAROLIEiJ_G0032203) #7	Pou2af1 (MGP_CAROLIEiJ_G0032204) #8	Pou2af3 (MGP_CAROLIEiJ_G0032205) #9	Pou2af2 (MGP_CAROLIEiJ_G0032206) #10	Arhgap20 (MGP_CAROLIEiJ_G0032207) #11	Fdx1 (MGP_CAROLIEiJ_G0032208) #12	Rdx (MGP_CAROLIEiJ_G0032209) #13	Zc3h12c (MGP_CAROLIEiJ_G0032210) #14	AI593442 (MGP_CAROLIEiJ_G0032211) #17	Ddx10 (MGP_CAROLIEiJ_G0032212) #19	Exph5 (MGP_CAROLIEiJ_G0032213) #20	Poglut3 (MGP_CAROLIEiJ_G0032214) #21	4930550C14Rik (MGP_CAROLIEiJ_G0032215) #22	Atm (MGP_CAROLIEiJ_G0032216) #24	Npat (MGP_CAROLIEiJ_G0032217) #26	Acat1 (MGP_CAROLIEiJ_G0032218) #27	Cul5 (MGP_CAROLIEiJ_G0032219) #28	Rab39 (MGP_CAROLIEiJ_G0032220) #29	Slc35f2 (MGP_CAROLIEiJ_G0032221) #30	Sln (MGP_CAROLIEiJ_G0032222)	Elmod1 (MGP_CAROLIEiJ_G0032223) #31	Tnfaip8l3 (MGP_CAROLIEiJ_G0032224)	Cyp19a1 (MGP_CAROLIEiJ_G0032225)	Gldn (MGP_CAROLIEiJ_G0032226)	Dmxl2 (MGP_CAROLIEiJ_G0032227)	MGP_CAROLIEiJ_G0032228	Cib2 (MGP_CAROLIEiJ_G0032229)	Idh3a (MGP_CAROLIEiJ_G0032230)
Shrew mouse	MODERN SPECIES	1	Sik2 (MGP_PahariEiJ_G0015068)	Layn (MGP_PahariEiJ_G0015069)	Hoatz (MGP_PahariEiJ_G0015070)	Btg4 (MGP_PahariEiJ_G0015071) #7	Pou2af1 (MGP_PahariEiJ_G0015072) #8	Pou2af3 (MGP_PahariEiJ_G0015073) #9	MGP_PahariEiJ_G0015074 #10	Arhgap20 (MGP_PahariEiJ_G0015075) #11	Fdx1 (MGP_PahariEiJ_G0015076) #12	Rdx (MGP_PahariEiJ_G0015077) #13	Zc3h12c (MGP_PahariEiJ_G0015078) #14	AI593442 (MGP_PahariEiJ_G0015079) #17	Ddx10 (MGP_PahariEiJ_G0015080) #19	Exph5 (MGP_PahariEiJ_G0015081) #20	Poglut3 (MGP_PahariEiJ_G0015082) #21	4930550C14Rik (MGP_PahariEiJ_G0015083) #22	Atm (MGP_PahariEiJ_G0015084) #24	Npat (MGP_PahariEiJ_G0015085) #26	Acat1 (MGP_PahariEiJ_G0015086) #27	Cul5 (MGP_PahariEiJ_G0015087) #28	Rab39 (MGP_PahariEiJ_G0015088) #29	Slc35f2 (MGP_PahariEiJ_G0015089) #30	Sln (MGP_PahariEiJ_G0015090)	Elmod1 (MGP_PahariEiJ_G0015091) #31	Tnfaip8l3 (MGP_PahariEiJ_G0015092)	Cyp19a1 (MGP_PahariEiJ_G0015093)	Gldn (MGP_PahariEiJ_G0015094)	Dmxl2 (MGP_PahariEiJ_G0015095)	MGP_PahariEiJ_G0015096	Cib2 (MGP_PahariEiJ_G0015097)	Idh3a (MGP_PahariEiJ_G0015098)
Rat	MODERN SPECIES	18	Hoatz (ENSRNOG00000043383)	Btg4 (ENSRNOG00000011277) #7	RGD1562811 (ENSRNOG00000067468)	Pou2af1 (ENSRNOG00000011500) #8	Pou2af3 (ENSRNOG00000042165) #9	Pou2af2 (ENSRNOG00000012022) #10	Arhgap20 (ENSRNOG00000025624) #11	Fdx1 (ENSRNOG00000012123) #12	Rdx (ENSRNOG00000012237) #13	Zc3h12c (ENSRNOG00000012470) #14	LOC100125362 (ENSRNOG00000025463) #17	ENSRNOG00000062987	Ddx10 (ENSRNOG00000012500) #19	Exph5 (ENSRNOG00000025115) #20	Poglut3 (ENSRNOG00000007177) #21	C8h11orf65 (ENSRNOG00000007266) #22	Atm (ENSRNOG00000029773) #24	Npat (ENSRNOG00000024934) #26	Acat1 (ENSRNOG00000007862) #27	Cul5 (ENSRNOG00000008039) #28	Rab39a (ENSRNOG00000063146) #29	Slc35f2 (ENSRNOG00000009014) #30	Sln (ENSRNOG00000009047)	Elmod1 (ENSRNOG00000009054) #31	Tnfaip8l3 (ENSRNOG00000024230)	Cyp19a1 (ENSRNOG00000000196)	Gldn (ENSRNOG00000024082)	Dmxl2 (ENSRNOG00000009170)	ENSRNOG00000064519	Sh2d7 (ENSRNOG00000023870)	Idh3a (ENSRNOG00000010277)
Upper Galilee mountains blind mole rat	MODERN SPECIES	670												Ddx10 (ENSNGAG00000010526) #19	ENSNGAG00000006714	Exph5 (ENSNGAG00000016578) #20	Poglut3 (ENSNGAG00000005388) #21	4930550C14Rik (ENSNGAG00000000140) #22	ENSNGAG00000010709	Atm (ENSNGAG00000012065) #24	Npat (ENSNGAG00000013282) #26	Acat1 (ENSNGAG00000021411) #27	Cul5 (ENSNGAG00000014111) #28	ENSNGAG00000011008	Rab39 (ENSNGAG00000010480) #29	Slc35f2 (ENSNGAG00000009488) #30	ENSNGAG00000003234	Elmod1 (ENSNGAG00000001481) #31	Alkbh8 (ENSNGAG00000017423) #32	ENSNGAG00000015354 #33	Gucy1a2 (ENSNGAG00000004842) #34	Aasdhppt (ENSNGAG00000001163) #35	Kbtbd3 (ENSNGAG00000016797) #36
Lesser Egyptian jerboa	MODERN SPECIES	49	ENSJJAG00000019895 #33	ENSJJAG00000017068	Alkbh8 (ENSJJAG00000021066) #32	Elmod1 (ENSJJAG00000018776) #31	Sln (ENSJJAG00000000991)	ENSJJAG00000014806 #30	Rab39 (ENSJJAG00000022717) #29	Cul5 (ENSJJAG00000009942) #28	ENSJJAG00000018798	Acat1 (ENSJJAG00000010565) #27	ENSJJAG00000020466	Npat (ENSJJAG00000019030) #26	Atm (ENSJJAG00000022280) #24	Exph5 (ENSJJAG00000021356) #20	Poglut3 (ENSJJAG00000005365) #21	4930550C14Rik (ENSJJAG00000015326) #22
Kangaroo rat	MODERN SPECIES	329	Alg9 (ENSDORG00000004027)	Ppp2r1b (ENSDORG00000009030)	Sik2 (ENSDORG00000009027)	Layn (ENSDORG00000023283)	Hoatz (ENSDORG00000009023)	Pou2af1 (ENSDORG00000016676) #8	Pou2af3 (ENSDORG00000023665) #9	Pou2af2 (ENSDORG00000011410) #10	Arhgap20 (ENSDORG00000027581) #11	Fdx1 (ENSDORG00000027025) #12	Rdx (ENSDORG00000009135) #13	Zc3h12c (ENSDORG00000009134) #14	Ddx10 (ENSDORG00000014459) #19	Exph5 (ENSDORG00000015514) #20	Poglut3 (ENSDORG00000005132) #21	4930550C14Rik (ENSDORG00000005437) #22	Atm (ENSDORG00000013688) #24	Npat (ENSDORG00000013685) #26	Acat1 (ENSDORG00000013681) #27	Cul5 (ENSDORG00000008149) #28	Rab39 (ENSDORG00000026121) #29	Slc35f2 (ENSDORG00000016340) #30	Sln (ENSDORG00000026414)	Elmod1 (ENSDORG00000008597) #31	Alkbh8 (ENSDORG00000008596) #32	ENSDORG00000008595 #33	Gucy1a2 (ENSDORG00000007568) #34	Aasdhppt (ENSDORG00000012684) #35	Kbtbd3 (ENSDORG00000012680) #36	Msantd4 (ENSDORG00000023419) #37	ENSDORG00000023554
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648.i #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Marmotini	ANCESTRAL SPECIES	20	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648.i #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Marmotini_b	ANCESTRAL SPECIES	122													ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648.i #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Squirrel	MODERN SPECIES	151													DDX10 (ENSSTOG00000005213) #19	EXPH5 (ENSSTOG00000004543) #20	POGLUT3 (ENSSTOG00000022975) #21	C11orf65 (ENSSTOG00000004513) #22	ATM (ENSSTOG00000004418) #24	NPAT (ENSSTOG00000004382) #26	ACAT1 (ENSSTOG00000004363) #27	CUL5 (ENSSTOG00000014157) #28	RAB39A (ENSSTOG00000003178) #29	SLC35F2 (ENSSTOG00000011321) #30	ENSSTOG00000001241	ELMOD1 (ENSSTOG00000001237) #31	ALKBH8 (ENSSTOG00000024939) #32	ENSSTOG00000033115 #33	ENSSTOG00000027350	GUCY1A2 (ENSSTOG00000013157) #34	AASDHPPT (ENSSTOG00000000268) #35	KBTBD3 (ENSSTOG00000001079) #36	MSANTD4 (ENSSTOG00000027044) #37
Arctic ground squirrel	MODERN SPECIES	207													DDX10 (ENSUPAG00010008664) #19	EXPH5 (ENSUPAG00010008610) #20	POGLUT3 (ENSUPAG00010008579) #21	C11orf65 (ENSUPAG00010008566) #22	ATM (ENSUPAG00010008165) #24	NPAT (ENSUPAG00010008128) #26	ACAT1 (ENSUPAG00010008119) #27	CUL5 (ENSUPAG00010008089) #28	ENSUPAG00010008079 #29	SLC35F2 (ENSUPAG00010008062) #30	ENSUPAG00010008058	ELMOD1 (ENSUPAG00010008041) #31	ALKBH8 (ENSUPAG00010007970) #32	CWF19L2 (ENSUPAG00010007890) #33	GUCY1A2 (ENSUPAG00010007868) #34	AASDHPPT (ENSUPAG00010007855) #35	KBTBD3 (ENSUPAG00010007846) #36	MSANTD4 (ENSUPAG00010007838) #37	GRIA4 (ENSUPAG00010007709)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005014599	ARHGAP20 (ENSSVLG00005014289) #11	FDX1 (ENSSVLG00005014193) #12	RDX (ENSSVLG00005014006) #13	ZC3H12C (ENSSVLG00005013570) #14	ENSSVLG00005013356	ENSSVLG00005013311	C11orf87 (ENSSVLG00005013245) #17	ENSSVLG00005013189	ENSSVLG00005013129	ENSSVLG00005013030	DDX10 (ENSSVLG00005012943) #19	EXPH5 (ENSSVLG00005012839) #20	POGLUT3 (ENSSVLG00005012714) #21	ENSSVLG00005012690	C11orf65 (ENSSVLG00005012582) #22	ENSSVLG00005012524	ENSSVLG00005021707	ATM (ENSSVLG00005021633) #24	NPAT (ENSSVLG00005021558) #26	ENSSVLG00005021105 #27	ENSSVLG00005021019 #28	ENSSVLG00005020943 #28	RAB39A (ENSSVLG00005020904) #29	SLC35F2 (ENSSVLG00005020721) #30	ENSSVLG00005020700	ELMOD1 (ENSSVLG00005020424) #31	ENSSVLG00005020267 #32	CWF19L2 (ENSSVLG00005020205) #33	GUCY1A2 (ENSSVLG00005020104) #34	ENSSVLG00005020058
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Hystricomorpha_b	ANCESTRAL SPECIES	23	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Long-tailed chinchilla	MODERN SPECIES	119	HOATZ (ENSCLAG00000013175)	ENSCLAG00000014472	BTG4 (ENSCLAG00000013983) #7	POU2AF1 (ENSCLAG00000015586) #8	POU2AF3 (ENSCLAG00000012877) #9	ENSCLAG00000015506 #10	ARHGAP20 (ENSCLAG00000012051) #11	ENSCLAG00000015869	FDX1 (ENSCLAG00000013409) #12	RDX (ENSCLAG00000013404) #13	ZC3H12C (ENSCLAG00000012577) #14	C11orf87 (ENSCLAG00000015145) #17	DDX10 (ENSCLAG00000013463) #19	EXPH5 (ENSCLAG00000014388) #20	POGLUT3 (ENSCLAG00000013476) #21	C11orf65 (ENSCLAG00000011009) #22	ATM (ENSCLAG00000011868) #24	NPAT (ENSCLAG00000014595) #26	ACAT1 (ENSCLAG00000013807) #27	CUL5 (ENSCLAG00000012699) #28	RAB39A (ENSCLAG00000013833) #29	SLC35F2 (ENSCLAG00000016324) #30	ENSCLAG00000011651	ELMOD1 (ENSCLAG00000011927) #31	ENSCLAG00000011087	ENSCLAG00000015715	CWF19L2 (ENSCLAG00000013844) #33	GUCY1A2 (ENSCLAG00000017060) #34	AASDHPPT (ENSCLAG00000015434) #35	KBTBD3 (ENSCLAG00000014468) #36	MSANTD4 (ENSCLAG00000016121) #37
Degu	MODERN SPECIES	53	POU2AF2 (ENSODEG00000011866) #10	ENSODEG00000019857	ENSODEG00000011838	ENSODEG00000019923	ENSODEG00000011527	ENSODEG00000010847	ARHGAP20 (ENSODEG00000011570) #11	FDX1 (ENSODEG00000010396) #12	RDX (ENSODEG00000011001) #13	ZC3H12C (ENSODEG00000011026) #14	C11orf87 (ENSODEG00000019863) #17	ENSODEG00000011294	ENSODEG00000012589	EXPH5 (ENSODEG00000012829) #20	POGLUT3 (ENSODEG00000010261) #21	C11orf65 (ENSODEG00000010746) #22	ENSODEG00000011472	ATM (ENSODEG00000015667) #24	NPAT (ENSODEG00000011867) #26	ACAT1 (ENSODEG00000011303) #27	CUL5 (ENSODEG00000011295) #28	RAB39A (ENSODEG00000013106) #29	ENSODEG00000012285	SLC35F2 (ENSODEG00000012070) #30	ELMOD1 (ENSODEG00000015056) #31	ENSODEG00000020136	ALKBH8 (ENSODEG00000011567) #32	ENSODEG00000013543 #33	ENSODEG00000012492 #34	ENSODEG00000011994 #35	KBTBD3 (ENSODEG00000012092) #36
Guinea pig	MODERN SPECIES	136										FDX1 (ENSCPOG00000033006) #12	RDX (ENSCPOG00000003401) #13	ZC3H12C (ENSCPOG00000032962) #14	DDX10 (ENSCPOG00000000865) #19	EXPH5 (ENSCPOG00000033722) #20	POGLUT3 (ENSCPOG00000005942) #21	C11orf65 (ENSCPOG00000007853) #22	ATM (ENSCPOG00000010997) #24	NPAT (ENSCPOG00000010522) #26	ACAT1 (ENSCPOG00000015048) #27	CUL5 (ENSCPOG00000011436) #28	RAB39A (ENSCPOG00000040219) #29	SLC35F2 (ENSCPOG00000035208) #30	ENSCPOG00000033544	ELMOD1 (ENSCPOG00000007697) #31	ENSCPOG00000036448	ENSCPOG00000027134
Atlantogenata	ANCESTRAL SPECIES	40	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000003661	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000163685	ENSGT00940000153395.a	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Afrotheria	ANCESTRAL SPECIES	43	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163685	ENSGT00940000153395.a	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Afrotheria_a	ANCESTRAL SPECIES	41	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163685	ENSGT00940000153395.a	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01040000240879	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b
Elephant	MODERN SPECIES	340	CFAP68 (ENSLAFG00000014656)	PPP2R1B (ENSLAFG00000000279)	SIK2 (ENSLAFG00000000276)	LAYN (ENSLAFG00000011873)	HOATZ (ENSLAFG00000022091)	BTG4 (ENSLAFG00000011872) #7	POU2AF1 (ENSLAFG00000007524) #8	POU2AF2 (ENSLAFG00000008233) #10	ARHGAP20 (ENSLAFG00000004587) #11	ENSLAFG00000011999 #12	RDX (ENSLAFG00000014920) #13	ZC3H12C (ENSLAFG00000016296) #14	DDX10 (ENSLAFG00000005951) #19	EXPH5 (ENSLAFG00000008891) #20	POGLUT3 (ENSLAFG00000008888) #21	C11orf65 (ENSLAFG00000008195) #22	ATM (ENSLAFG00000008182) #24	NPAT (ENSLAFG00000013398) #26	ACAT1 (ENSLAFG00000005631) #27	CUL5 (ENSLAFG00000005623) #28	RAB39A (ENSLAFG00000005620) #29	SLC35F2 (ENSLAFG00000009091) #30	ENSLAFG00000002248	ELMOD1 (ENSLAFG00000002246) #31	ALKBH8 (ENSLAFG00000017895) #32	CWF19L2 (ENSLAFG00000004402) #33	GUCY1A2 (ENSLAFG00000003075) #34	AASDHPPT (ENSLAFG00000018543) #35	KBTBD3 (ENSLAFG00000013885) #36	MSANTD4 (ENSLAFG00000010986) #37	GRIA4 (ENSLAFG00000010979)
Tenrec	MODERN SPECIES	8684																C11orf65 (ENSETEG00000014829) #22
Xenarthra	ANCESTRAL SPECIES	285														ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01100000263709	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34
Armadillo	MODERN SPECIES	2790													EXPH5 (ENSDNOG00000018145) #20	POGLUT3 (ENSDNOG00000018144) #21	ENSDNOG00000031090	C11orf65 (ENSDNOG00000037840) #22	ATM (ENSDNOG00000011482) #24	NPAT (ENSDNOG00000006503) #26	ACAT1 (ENSDNOG00000001955) #27	CUL5 (ENSDNOG00000012113) #28	RAB39A (ENSDNOG00000024649) #29	SLC35F2 (ENSDNOG00000002379) #30	ENSDNOG00000002378	ELMOD1 (ENSDNOG00000043399) #31	ALKBH8 (ENSDNOG00000035970) #32	CWF19L2 (ENSDNOG00000004526) #33	GUCY1A2 (ENSDNOG00000001462) #34
Sloth	MODERN SPECIES	5418																ENSCHOG00000007536 #22
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916.a #12	ENSGT00940000156916.b #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT01030000234886
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677	ENSGT00950000182952.A.a #7	ENSGT00390000017499 #8	ENSGT00420000030454 #9	ENSGT00390000000586 #10	ENSGT00940000154633 #11	ENSGT00940000156916.a #12	ENSGT00940000156916.b #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000162555.b.b
Diprotodontia	ANCESTRAL SPECIES	71											ENSGT00940000156916.b #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000162555.b.b	ENSGT00940000162428.a.a
Diprotodontia_a	ANCESTRAL SPECIES	68											ENSGT00940000156916.b #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000162555.b.b	ENSGT00940000162428.a.a
koala	MODERN SPECIES	62											ENSPCIG00000013035 #12	RDX (ENSPCIG00000022160) #13	ZC3H12C (ENSPCIG00000022169) #14	DDX10 (ENSPCIG00000003013) #19	ENSPCIG00000002845 #20	C11orf65 (ENSPCIG00000002822) #22	ENSPCIG00000032961 #24	ENSPCIG00000002737 #24	NPAT (ENSPCIG00000002706) #26	ACAT1 (ENSPCIG00000002690) #27	CUL5 (ENSPCIG00000002669) #28	ENSPCIG00000002651 #30	ENSPCIG00000031787	ELMOD1 (ENSPCIG00000002612) #31	ENSPCIG00000002569	ENSPCIG00000002556 #33	GUCY1A2 (ENSPCIG00000002542) #34	AASDHPPT (ENSPCIG00000036047) #35	KBTBD3 (ENSPCIG00000024380) #36	MSANTD4 (ENSPCIG00000024381) #37	GRIA4 (ENSPCIG00000024382)
Common wonbat	MODERN SPECIES	486											ENSVURG00010014336 #12	RDX (ENSVURG00010014291) #13	ZC3H12C (ENSVURG00010014272) #14	DDX10 (ENSVURG00010014237) #19	ENSVURG00010014219 #20	C11orf65 (ENSVURG00010014205) #22	ATM (ENSVURG00010014065) #24	NPAT (ENSVURG00010014042) #26	ACAT1 (ENSVURG00010014032) #27	CUL5 (ENSVURG00010014011) #28	SLC35F2 (ENSVURG00010014003) #30	ENSVURG00010013996	ELMOD1 (ENSVURG00010013978) #31	ALKBH8 (ENSVURG00010013932) #32	CWF19L2 (ENSVURG00010013919) #33	GUCY1A2 (ENSVURG00010013911) #34	AASDHPPT (ENSVURG00010013905) #35	KBTBD3 (ENSVURG00010013900) #36	MSANTD4 (ENSVURG00010013897) #37	GRIA4 (ENSVURG00010013871)	ENSVURG00010013863
Tasmanian devil	MODERN SPECIES	2	SIK2 (ENSSHAG00000014444)	LAYN (ENSSHAG00000023397)	ENSSHAG00000025424	ENSSHAG00000015374 #7	POU2AF1 (ENSSHAG00000029147) #8	POU2AF3 (ENSSHAG00000003134) #9	ENSSHAG00000003912 #10	ARHGAP20 (ENSSHAG00000031013) #11	FDX1 (ENSSHAG00000002662) #12	RDX (ENSSHAG00000003707) #13	ZC3H12C (ENSSHAG00000028032) #14	C11orf87 (ENSSHAG00000023256) #17	ENSSHAG00000022442	DDX10 (ENSSHAG00000008417) #19	ENSSHAG00000023763 #20	ENSSHAG00000010519 #22	ATM (ENSSHAG00000010836) #24	NPAT (ENSSHAG00000011566) #26	ACAT1 (ENSSHAG00000011879) #27	CUL5 (ENSSHAG00000012119) #28	RAB39A (ENSSHAG00000021447) #29	SLC35F2 (ENSSHAG00000012942) #30	ELMOD1 (ENSSHAG00000013810) #31	ALKBH8 (ENSSHAG00000014253) #32	CWF19L2 (ENSSHAG00000014582) #33	GUCY1A2 (ENSSHAG00000022853) #34	AASDHPPT (ENSSHAG00000025896) #35	KBTBD3 (ENSSHAG00000023656) #36	MSANTD4 (ENSSHAG00000023893) #37	GRIA4 (ENSSHAG00000013857)	ENSSHAG00000024823
Opossum	MODERN SPECIES	3	PPP2R1B (ENSMODG00000014475)	SIK2 (ENSMODG00000014489)	LAYN (ENSMODG00000014493)	ENSMODG00000025567	ENSMODG00000014496 #7	POU2AF1 (ENSMODG00000014504) #8	POU2AF3 (ENSMODG00000029830) #9	POU2AF2 (ENSMODG00000014506) #10	ARHGAP20 (ENSMODG00000014521) #11	FDX1 (ENSMODG00000014530) #12	RDX (ENSMODG00000014549) #13	ZC3H12C (ENSMODG00000014555) #14	ENSMODG00000028814	DDX10 (ENSMODG00000014600) #19	ENSMODG00000014611 #20	C11orf65 (ENSMODG00000014615) #22	ENSMODG00000046482 #24	NPAT (ENSMODG00000014648) #26	ACAT1 (ENSMODG00000014653) #27	ENSMODG00000014666 #28	ENSMODG00000040418 #28	ENSMODG00000014670 #29	SLC35F2 (ENSMODG00000014677) #30	ELMOD1 (ENSMODG00000014705) #31	ALKBH8 (ENSMODG00000014721) #32	CWF19L2 (ENSMODG00000014689) #33	ENSMODG00000024425	GUCY1A2 (ENSMODG00000014724) #34	AASDHPPT (ENSMODG00000014729) #35	KBTBD3 (ENSMODG00000014731) #36	MSANTD4 (ENSMODG00000047682) #37
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000157028	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00960000189887	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01070000254066	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313	ENSGT01030000234590.B.a.b	ENSGT00390000000527	ENSGT00390000010184
Lepidosauria	ANCESTRAL SPECIES	17	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555.v	ENSGT00940000160555.u	ENSGT00960000189887	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01070000254066	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313	ENSGT01030000234590.B.a.b	ENSGT00390000000527	ENSGT00960000189669
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555.v	ENSGT00940000160555.u	ENSGT00960000189887	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01070000254066	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.g.a.a	ENSGT00960000189669	ENSGT00940000157765 #34	ENSGT00390000004663 #35
Laterata	ANCESTRAL SPECIES	3	ENSGT00940000157028	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555.v	ENSGT00940000160555.u	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01070000254066	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.g.a.b	ENSGT00390000009313.g.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Argentine black and white tegu	MODERN SPECIES	24	TRPC6 (ENSSMRG00000010734)	ANGPTL5 (ENSSMRG00000010741)	ENSSMRG00000010744	ENSSMRG00000010748	YAP1 (ENSSMRG00000010770)	ENSSMRG00000010773	ENSSMRG00000010775	ENSSMRG00000010777	FDX1 (ENSSMRG00000010785) #12	RDX (ENSSMRG00000010790) #13	ZC3H12C (ENSSMRG00000010798) #14	C11orf87 (ENSSMRG00000010849) #17	DDX10 (ENSSMRG00000010887) #19	ENSSMRG00000010889 #20	POGLUT3 (ENSSMRG00000010901) #21	C11orf65 (ENSSMRG00000010904) #22	ATM (ENSSMRG00000010912) #24	NPAT (ENSSMRG00000010937) #26	ACAT1 (ENSSMRG00000010943) #27	CUL5 (ENSSMRG00000010946) #28	RAB39A (ENSSMRG00000010960) #29	SLC35F2 (ENSSMRG00000010961) #30	ELMOD1 (ENSSMRG00000010965) #31	ALKBH8 (ENSSMRG00000011004) #32	CWF19L2 (ENSSMRG00000011005) #33	ENSSMRG00000011036	ENSSMRG00000011037	GUCY1A2 (ENSSMRG00000011053) #34	AASDHPPT (ENSSMRG00000011056) #35	KBTBD3 (ENSSMRG00000011057) #36	MSANTD4 (ENSSMRG00000011059) #37
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000003192	ENSPMRG00000003185	ENSPMRG00000003171	ENSPMRG00000003167	CENPJ (ENSPMRG00000003145)	RNF17 (ENSPMRG00000003024)	ARHGAP20 (ENSPMRG00000002968) #11	FDX1 (ENSPMRG00000002957) #12	ENSPMRG00000002938 #13	ZC3H12C (ENSPMRG00000002916) #14	ENSPMRG00000002908	C11orf87 (ENSPMRG00000002897) #17	ENSPMRG00000002873	ENSPMRG00000002836 #20	POGLUT3 (ENSPMRG00000002818) #21	C11orf65 (ENSPMRG00000002807) #22	ATM (ENSPMRG00000001652) #24	NPAT (ENSPMRG00000001091) #26	ACAT1 (ENSPMRG00000000652) #27	CUL5 (ENSPMRG00000000459) #28	RAB39A (ENSPMRG00000000433) #29	SLC35F2 (ENSPMRG00000000386) #30	ENSPMRG00000000345	ELMOD1 (ENSPMRG00000000319) #31	ENSPMRG00000000302	ALKBH8 (ENSPMRG00000000271) #32	CWF19L2 (ENSPMRG00000000201) #33	ENSPMRG00000000169	ENSPMRG00000000154	ENSPMRG00000010995	ENSPMRG00000010993
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555.v	ENSGT00940000160555.u	ENSGT00960000189887	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.g.a.a	ENSGT00960000189669	ENSGT00390000009313.h.a.a	ENSGT00940000157765 #34	ENSGT00390000004663 #35
Elapidae	ANCESTRAL SPECIES	10	ENSGT00940000157028	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555.v	ENSGT00940000160555.u	ENSGT00960000189887	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.h.b.a.a.a.a.a	ENSGT00390000009313.g.a.a	ENSGT00960000189669	ENSGT00940000157765 #34	ENSGT01010000230278
Indian cobra	MODERN SPECIES	4	ENSNNAG00000005284	ENSNNAG00000005295	PSPC1 (ENSNNAG00000005339)	MPHOSPH8 (ENSNNAG00000005425)	ENSNNAG00000005711	ENSNNAG00000005739	ENSNNAG00000005753	ENSNNAG00000005770	ENSNNAG00000005832 #11	FDX1 (ENSNNAG00000005854) #12	RDX (ENSNNAG00000005870) #13	ZC3H12C (ENSNNAG00000005913) #14	C11orf87 (ENSNNAG00000005956) #17	DDX10 (ENSNNAG00000006077) #19	ENSNNAG00000007292 #20	C11orf65 (ENSNNAG00000007316) #22	ENSNNAG00000007333 #24	ENSNNAG00000007345 #24	NPAT (ENSNNAG00000007395) #26	ACAT1 (ENSNNAG00000007762) #27	CUL5 (ENSNNAG00000007856) #28	RAB39A (ENSNNAG00000008470) #29	SLC35F2 (ENSNNAG00000008491) #30	ELMOD1 (ENSNNAG00000008764) #31	ENSNNAG00000008804	ENSNNAG00000008824 #32	ENSNNAG00000008840 #33	ENSNNAG00000008864	ENSNNAG00000008899	ENSNNAG00000008926	ENSNNAG00000008944
Elapidae_a	ANCESTRAL SPECIES	143														ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.h.b.a.a.a.a.a.a
Acanthophiinae	ANCESTRAL SPECIES	134														ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.h.b.a.a.a.a.a.a
Eastern brown snake	MODERN SPECIES	152														DDX10 (ENSPTXG00000015351) #19	ENSPTXG00000016398 #20	C11orf65 (ENSPTXG00000016399) #22	ENSPTXG00000016401 #24	ENSPTXG00000016402 #24	NPAT (ENSPTXG00000016404) #26	ACAT1 (ENSPTXG00000016408) #27	CUL5 (ENSPTXG00000016410) #28	RAB39A (ENSPTXG00000016414) #29	SLC35F2 (ENSPTXG00000016416) #30	ELMOD1 (ENSPTXG00000016420) #31	ALKBH8 (ENSPTXG00000016425) #32	ENSPTXG00000016428 #33	ENSPTXG00000016431
Blue-lipped sea krait	MODERN SPECIES	843																ENSLLTG00000001724 #22
tuatara	MODERN SPECIES	586														DDX10 (ENSSPUG00000017612) #19	POGLUT3 (ENSSPUG00000017594) #21	C11orf65 (ENSSPUG00000017572) #22	ENSSPUG00000017559 #24	ENSSPUG00000017550 #24	ENSSPUG00000017542 #24	ENSSPUG00000017533 #24	ENSSPUG00000017524 #24	ENSSPUG00000017521 #24	ENSSPUG00000017508 #24	NPAT (ENSSPUG00000017323) #26	ACAT1 (ENSSPUG00000017259) #27	CUL5 (ENSSPUG00000017242) #28	RAB39A (ENSSPUG00000017232) #29
Archelosauria	ANCESTRAL SPECIES		ENSGT00940000157028	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00960000189887	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT01070000254066	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.i.b	ENSGT00960000189669	ENSGT00940000157765 #34	ENSGT00390000004663 #35
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00960000189887	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00940000166463	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.i.b	ENSGT00960000189669	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000157028	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00960000189887	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.i.b	ENSGT00960000189669	ENSGT00940000157765.a #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36
Emydidae	ANCESTRAL SPECIES	19	ENSGT01050000244864.B.b	ENSGT00940000157028	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633 #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.i.b	ENSGT00960000189669	ENSGT00940000157765.a #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Three-toed box turtle	MODERN SPECIES	65	GJA3 (ENSTMTG00000013509)	ZMYM2 (ENSTMTG00000013456)	PSPC1 (ENSTMTG00000013432)	MPHOSPH8 (ENSTMTG00000013369)	PARP4 (ENSTMTG00000012722)	CENPJ (ENSTMTG00000012478)	ENSTMTG00000012413	ARHGAP20 (ENSTMTG00000011782) #11	FDX1 (ENSTMTG00000011731) #12	RDX (ENSTMTG00000011012) #13	ZC3H12C (ENSTMTG00000010838) #14	C11orf87 (ENSTMTG00000010825) #17	DDX10 (ENSTMTG00000010624) #19	EXPH5 (ENSTMTG00000010599) #20	POGLUT3 (ENSTMTG00000010555) #21	C11orf65 (ENSTMTG00000010518) #22	ATM (ENSTMTG00000010271) #24	NPAT (ENSTMTG00000010201) #26	ACAT1 (ENSTMTG00000010178) #27	CUL5 (ENSTMTG00000010107) #28	RAB39A (ENSTMTG00000010083) #29	SLC35F2 (ENSTMTG00000010053) #30	ELMOD1 (ENSTMTG00000010019) #31	ALKBH8 (ENSTMTG00000009987) #32	CWF19L2 (ENSTMTG00000009945) #33	GUCY1A2 (ENSTMTG00000009909) #34	AASDHPPT (ENSTMTG00000009893) #35	KBTBD3 (ENSTMTG00000009877) #36	MSANTD4 (ENSTMTG00000009855) #37	GRIA4 (ENSTMTG00000009194)	ENSTMTG00000009152
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000157028	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00960000189887	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633.s #11	ENSGT00940000156916 #12	ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00940000159933 #29	ENSGT00390000015655.a #30	ENSGT00940000159782 #31	ENSGT00940000168471	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00390000009313.i.b	ENSGT00940000157765.a #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37
Goode s thornscrub tortoise	MODERN SPECIES		GJA3 (ENSGEVG00005014819)	ZMYM2 (ENSGEVG00005014688)	PSPC1 (ENSGEVG00005014636)	MPHOSPH8 (ENSGEVG00005014166)	ENSGEVG00005014109	CENPJ (ENSGEVG00005014075)	ENSGEVG00005013935	ENSGEVG00005013883 #11	FDX1 (ENSGEVG00005013870) #12	RDX (ENSGEVG00005013816) #13	ZC3H12C (ENSGEVG00005013665) #14	C11orf87 (ENSGEVG00005013647) #17	DDX10 (ENSGEVG00005013614) #19	ENSGEVG00005013533 #20	POGLUT3 (ENSGEVG00005013509) #21	C11orf65 (ENSGEVG00005013430) #22	ATM (ENSGEVG00005012823) #24	NPAT (ENSGEVG00005012670) #26	ACAT1 (ENSGEVG00005012589) #27	CUL5 (ENSGEVG00005012461) #28	RAB39A (ENSGEVG00005012426) #29	SLC35F2 (ENSGEVG00005012399) #30	ELMOD1 (ENSGEVG00005012329) #31	ALKBH8 (ENSGEVG00005012274) #32	CWF19L2 (ENSGEVG00005012229) #33	ENSGEVG00005012190	GUCY1A2 (ENSGEVG00005012110) #34	AASDHPPT (ENSGEVG00005012085) #35	KBTBD3 (ENSGEVG00005012066) #36	ENSGEVG00005012021	MSANTD4 (ENSGEVG00005012006) #37
Anura	ANCESTRAL SPECIES	28									ENSGT01090000260082.d.a.b #13	ENSGT00940000158397 #14	ENSGT00930000151482	ENSGT00390000012905 #17	ENSGT00550000074980 #19	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #24	ENSGT00390000012388 #26	ENSGT01030000234626.E #27	ENSGT00940000156648 #28	ENSGT00390000015655.a #30	ENSGT01070000254066	ENSGT00940000159782 #31	ENSGT00940000158563 #32	ENSGT00940000155627 #33	ENSGT00940000157765 #34	ENSGT00390000004663 #35	ENSGT00940000158415 #36	ENSGT00440000039469 #37	ENSGT00940000155677.b	ENSGT00940000159575
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000008244	ENSLLEG00000008228	ENSLLEG00000008203	ENSLLEG00000008184	ENSLLEG00000008162	ENSLLEG00000008118	ENSLLEG00000008105	ENSLLEG00000008090 #17	ENSLLEG00000008075	ENSLLEG00000008060	DDX10 (ENSLLEG00000007754) #19	ENSLLEG00000007708	ENSLLEG00000007687 #20	ENSLLEG00000007677	POGLUT3 (ENSLLEG00000007628) #21	C11orf65 (ENSLLEG00000007570) #22	ATM (ENSLLEG00000007322) #24	NPAT (ENSLLEG00000007156) #26	ACAT1 (ENSLLEG00000006942) #27	CUL5 (ENSLLEG00000006636) #28	ENSLLEG00000006566 #30	ENSLLEG00000006551	ENSLLEG00000006513	ENSLLEG00000006462	ENSLLEG00000006432	ENSLLEG00000006333	ENSLLEG00000005972	ENSLLEG00000005925	ENSLLEG00000005901	ENSLLEG00000005808	ENSLLEG00000005767