Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Pecora	ANCESTRAL SPECIES	7	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00520000058823 #36	ENSGT00940000162506 #37	ENSGT00950000183200.A.a.a
Percora_a	ANCESTRAL SPECIES	6	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00520000058823 #36	ENSGT00940000162506 #37	ENSGT00950000183200.A.a.a
Bovidae	ANCESTRAL SPECIES	6	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00520000058823 #36	ENSGT00940000162506 #37	ENSGT00950000183200.A.a.a
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00520000058823 #36	ENSGT00940000162506 #37	ENSGT00950000183200.A.a.a	ENSGT00940000160158	ENSGT00390000012084
Goat	MODERN SPECIES	6	HOATZ (ENSCHIG00000026923) #7	BTG4 (ENSCHIG00000017012) #8	POU2AF1 (ENSCHIG00000020104) #9	ENSCHIG00000019618 #10	POU2AF2 (ENSCHIG00000022867) #11	ARHGAP20 (ENSCHIG00000015605) #12	FDX1 (ENSCHIG00000011264) #13	RDX (ENSCHIG00000019539) #14	ENSCHIG00000005668 #15	ZC3H12C (ENSCHIG00000021221) #16	C11orf87 (ENSCHIG00000010296) #17	DDX10 (ENSCHIG00000015147) #18	ENSCHIG00000025788 #19	EXPH5 (ENSCHIG00000023120) #20	POGLUT3 (ENSCHIG00000021251) #21	C11orf65 (ENSCHIG00000016475) #22	ATM (ENSCHIG00000016588) #23	NPAT (ENSCHIG00000016984) #24	ENSCHIG00000025404 #25	ACAT1 (ENSCHIG00000021198) #26	CUL5 (ENSCHIG00000023581) #27	RAB39A (ENSCHIG00000019858) #28	SLC35F2 (ENSCHIG00000024400) #29	ELMOD1 (ENSCHIG00000016129) #30	ALKBH8 (ENSCHIG00000008649) #31	ENSCHIG00000009937 #32	ENSCHIG00000012992 #33	ENSCHIG00000016274 #34	CWF19L2 (ENSCHIG00000013182) #35	C11orf97 (ENSCHIG00000025332) #36	FUT4 (ENSCHIG00000013426) #37
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020016124	HOATZ (ENSOARG00020015720) #7	BTG4 (ENSOARG00020015591) #8	POU2AF1 (ENSOARG00020015552) #9	POU2AF3 (ENSOARG00020015480) #10	ENSOARG00020015269	ENSOARG00020015233	ARHGAP20 (ENSOARG00020013814) #12	FDX1 (ENSOARG00020013685) #13	RDX (ENSOARG00020013266) #14	ZC3H12C (ENSOARG00020012692) #16	C11orf87 (ENSOARG00020012655) #17	DDX10 (ENSOARG00020012337) #18	ENSOARG00020012164 #21	ENSOARG00020012131 #21	C11orf65 (ENSOARG00020012048) #22	ATM (ENSOARG00020011525) #23	NPAT (ENSOARG00020011163) #24	ACAT1 (ENSOARG00020011001) #26	CUL5 (ENSOARG00020010776) #27	RAB39A (ENSOARG00020010714) #28	SLC35F2 (ENSOARG00020010531) #29	ENSOARG00020010502	ELMOD1 (ENSOARG00020010015) #30	GUCY1A2 (ENSOARG00020024499) #34	OTX2 (ENSOARG00020024485)	CWF19L2 (ENSOARG00020024318) #35	C11orf97 (ENSOARG00020024290) #36	FUT4 (ENSOARG00020024279) #37	ENSOARG00020024270	PIWIL4 (ENSOARG00020024217)
Bovinae	ANCESTRAL SPECIES	21	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a.g #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00520000058823 #36	ENSGT00940000162506 #37	ENSGT00950000183200.A.a.a
Bos	ANCESTRAL SPECIES	20	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a.g #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00390000018141.i.a.b.b.a.a.b.a.a.a.b.b	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00520000058823 #36	ENSGT00940000162506 #37	ENSGT00950000183200.A.a.a
Bos_a	ANCESTRAL SPECIES	15	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a.g #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00390000018141.i.a.b.b.a.a.b.a.a.a.b.b	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00520000058823 #36	ENSGT00940000162506 #37	ENSGT00950000183200.A.a.a
Wild yak	MODERN SPECIES	2622														EXPH5 (ENSBMUG00000007079) #20	POGLUT3 (ENSBMUG00000007094) #21	C11orf65 (ENSBMUG00000007110) #22
Domestic yak	MODERN SPECIES	4	LAYN (ENSBGRG00000011284)	HOATZ (ENSBGRG00000011818) #7	BTG4 (ENSBGRG00000011931) #8	POU2AF1 (ENSBGRG00000011991) #9	POU2AF3 (ENSBGRG00000012117) #10	POU2AF2 (ENSBGRG00000012226) #11	ARHGAP20 (ENSBGRG00000012303) #12	FDX1 (ENSBGRG00000012771) #13	RDX (ENSBGRG00000012922) #14	ZC3H12C (ENSBGRG00000013345) #16	ENSBGRG00000013524	C11orf87 (ENSBGRG00000013586) #17	DDX10 (ENSBGRG00000013616) #18	EXPH5 (ENSBGRG00000013750) #20	POGLUT3 (ENSBGRG00000013901) #21	C11orf65 (ENSBGRG00000013973) #22	ATM (ENSBGRG00000014113) #23	NPAT (ENSBGRG00000014342) #24	ENSBGRG00000015349	ACAT1 (ENSBGRG00000015383) #26	CUL5 (ENSBGRG00000015749) #27	ENSBGRG00000016014	RAB39A (ENSBGRG00000016041) #28	ENSBGRG00000016082	ENSBGRG00000016110 #29	ENSBGRG00000016445	ELMOD1 (ENSBGRG00000016467) #30	ALKBH8 (ENSBGRG00000016689) #31	ENSBGRG00000016943	GUCY1A2 (ENSBGRG00000009963) #34	CWF19L2 (ENSBGRG00000010092) #35
Bos_b	ANCESTRAL SPECIES	19	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a.g #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00390000018141.i.a.b.b.a.a.b.a.a.a.b.b	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00520000058823 #36	ENSGT00940000162506 #37	ENSGT00950000183200.A.a.a
Hybrid Bos Indicus	MODERN SPECIES	6	LAYN (ENSBIXG00005003290)	BTG4 (ENSBIXG00005003249) #8	POU2AF1 (ENSBIXG00005019815) #9	POU2AF3 (ENSBIXG00005005670) #10	POU2AF2 (ENSBIXG00005003226) #11	ARHGAP20 (ENSBIXG00005019662) #12	FDX1 (ENSBIXG00005006592) #13	RDX (ENSBIXG00005019485) #14	ENSBIXG00005003140	ZC3H12C (ENSBIXG00005019306) #16	ENSBIXG00005019217	ENSBIXG00005007819 #17	DDX10 (ENSBIXG00005019167) #18	EXPH5 (ENSBIXG00005019057) #20	POGLUT3 (ENSBIXG00005002657) #21	C11orf65 (ENSBIXG00005019001) #22	ENSBIXG00005018983	ATM (ENSBIXG00005018945) #23	NPAT (ENSBIXG00005018906) #24	ACAT1 (ENSBIXG00005018887) #26	CUL5 (ENSBIXG00005003066) #27	RAB39A (ENSBIXG00005018809) #28	ENSBIXG00005018780 #29	ENSBIXG00005003044	ELMOD1 (ENSBIXG00005018713) #30	ALKBH8 (ENSBIXG00005018650) #31	ENSBIXG00005007655	GUCY1A2 (ENSBIXG00005018531) #34	CWF19L2 (ENSBIXG00005018327) #35	C11orf97 (ENSBIXG00005018281) #36	FUT4 (ENSBIXG00005018272) #37
Cow	MODERN SPECIES	6	HOATZ (ENSBTAG00000034338) #7	BTG4 (ENSBTAG00000034346) #8	POU2AF1 (ENSBTAG00000006282) #9	POU2AF3 (ENSBTAG00000052702) #10	POU2AF2 (ENSBTAG00000044177) #11	ENSBTAG00000049167	ARHGAP20 (ENSBTAG00000000333) #12	FDX1 (ENSBTAG00000011793) #13	RDX (ENSBTAG00000004672) #14	ZC3H12C (ENSBTAG00000008732) #16	ENSBTAG00000051234	C15H11orf87 (ENSBTAG00000050066) #17	DDX10 (ENSBTAG00000002382) #18	EXPH5 (ENSBTAG00000008253) #20	POGLUT3 (ENSBTAG00000008709) #21	C15H11orf65 (ENSBTAG00000054246) #22	ATM (ENSBTAG00000003111) #23	NPAT (ENSBTAG00000010286) #24	ACAT1 (ENSBTAG00000012885) #26	CUL5 (ENSBTAG00000012882) #27	RAB39A (ENSBTAG00000018246) #28	ENSBTAG00000003661 #29	SLN (ENSBTAG00000048585)	ELMOD1 (ENSBTAG00000002691) #30	ALKBH8 (ENSBTAG00000010642) #31	GUCY1A2 (ENSBTAG00000044144) #34	CWF19L2 (ENSBTAG00000018629) #35	ENSBTAG00000052218	C15H11orf97 (ENSBTAG00000040449) #36	FUT4 (ENSBTAG00000038062) #37	PIWIL4 (ENSBTAG00000014910)
American bison	MODERN SPECIES	3343	BTG4 (ENSBBBG00000008974) #8	POU2AF1 (ENSBBBG00000008809) #9	POU2AF3 (ENSBBBG00000023988) #10	POU2AF2 (ENSBBBG00000006242) #11	ENSBBBG00000024000	ARHGAP20 (ENSBBBG00000024047) #12	FDX1 (ENSBBBG00000008813) #13	ENSBBBG00000024066	RDX (ENSBBBG00000008883) #14	ZC3H12C (ENSBBBG00000008823) #16	ENSBBBG00000006331	C11orf87 (ENSBBBG00000008885) #17	DDX10 (ENSBBBG00000024390) #18	EXPH5 (ENSBBBG00000008187) #20	POGLUT3 (ENSBBBG00000024456) #21	C11orf65 (ENSBBBG00000008188) #22	ATM (ENSBBBG00000006445) #23	NPAT (ENSBBBG00000000204) #24	ACAT1 (ENSBBBG00000000174) #26	CUL5 (ENSBBBG00000007718) #27	RAB39A (ENSBBBG00000006493) #28	ENSBBBG00000024767 #29	ENSBBBG00000024782	ELMOD1 (ENSBBBG00000024882) #30	ENSBBBG00000006571	ENSBBBG00000024915 #31
Siberian musk deer	MODERN SPECIES	1171	PPP2R1B (ENSMMSG00000014850)	SIK2 (ENSMMSG00000014968)	LAYN (ENSMMSG00000015012)	HOATZ (ENSMMSG00000015204) #7	ENSMMSG00000015239 #8	POU2AF1 (ENSMMSG00000015256) #9	POU2AF3 (ENSMMSG00000015266) #10	POU2AF2 (ENSMMSG00000015279) #11	ARHGAP20 (ENSMMSG00000015335) #12	FDX1 (ENSMMSG00000015450) #13	RDX (ENSMMSG00000015488) #14	ZC3H12C (ENSMMSG00000015575) #16	C11orf87 (ENSMMSG00000015615) #17	DDX10 (ENSMMSG00000015634) #18	POGLUT3 (ENSMMSG00000015736) #21	C11orf65 (ENSMMSG00000015860) #22	ENSMMSG00000015908	ENSMMSG00000015967 #23	NPAT (ENSMMSG00000016265) #24	ACAT1 (ENSMMSG00000016397) #26	CUL5 (ENSMMSG00000016450) #27	ENSMMSG00000016507	ENSMMSG00000016523 #28	SLC35F2 (ENSMMSG00000016541) #29
Yarkand deer	MODERN SPECIES		LAYN (ENSCHYG00000000165)	HOATZ (ENSCHYG00000000123) #7	BTG4 (ENSCHYG00000000103) #8	POU2AF1 (ENSCHYG00000000067) #9	POU2AF3 (ENSCHYG00000000048) #10	POU2AF2 (ENSCHYG00000000034) #11	ARHGAP20 (ENSCHYG00000000014) #12	FDX1 (ENSCHYG00000003362) #13	RDX (ENSCHYG00000003229) #14	ZC3H12C (ENSCHYG00000003190) #16	ENSCHYG00000003130 #17	DDX10 (ENSCHYG00000003093) #18	EXPH5 (ENSCHYG00000003078) #20	POGLUT3 (ENSCHYG00000003058) #21	ENSCHYG00000003045	C11orf65 (ENSCHYG00000003029) #22	ATM (ENSCHYG00000002993) #23	NPAT (ENSCHYG00000002947) #24	ENSCHYG00000002932 ##14	ACAT1 (ENSCHYG00000002805) #26	CUL5 (ENSCHYG00000002728) #27	RAB39A (ENSCHYG00000002676) #28	SLC35F2 (ENSCHYG00000002643) #29	ENSCHYG00000002623	ENSCHYG00000002615	ELMOD1 (ENSCHYG00000002579) #30	ALKBH8 (ENSCHYG00000002526) #31	ENSCHYG00000002507	ENSCHYG00000002498	GUCY1A2 (ENSCHYG00000002488) #34	ENSCHYG00000002475
Cetacea	ANCESTRAL SPECIES	4	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00940000155627 #35	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00940000156477.l	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00950000182878.b.b.k.a.a	ENSGT00940000155627 #35	ENSGT00390000004663	ENSGT00940000158415
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00940000166727	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00950000182878.b.b.k.a.b.a.a	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00940000156477.l	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00950000182878.b.b.k.a.a	ENSGT00940000155627 #35	ENSGT00390000004663	ENSGT00940000158415
Beluga whale	MODERN SPECIES	70	ENSDLEG00000008751 #10	POU2AF2 (ENSDLEG00000008732) #11	ENSDLEG00000008710	ENSDLEG00000008699	ARHGAP20 (ENSDLEG00000008621) #12	FDX1 (ENSDLEG00000008588) #13	RDX (ENSDLEG00000008540) #14	ZC3H12C (ENSDLEG00000008479) #16	ENSDLEG00000008457	ENSDLEG00000008439	CUNH11orf87 (ENSDLEG00000008428) #17	DDX10 (ENSDLEG00000008220) #18	EXPH5 (ENSDLEG00000008158) #20	KDELC2 (ENSDLEG00000008140) #21	ENSDLEG00000008105	CUNH11orf65 (ENSDLEG00000008087) #22	ATM (ENSDLEG00000007995) #23	NPAT (ENSDLEG00000007940) #24	ACAT1 (ENSDLEG00000014983) #26	CUL5 (ENSDLEG00000014733) #27	RAB39A (ENSDLEG00000014698) #28	ENSDLEG00000014688	SLC35F2 (ENSDLEG00000014674) #29	ELMOD1 (ENSDLEG00000014648) #30	ALKBH8 (ENSDLEG00000014623) #31
Narwhal	MODERN SPECIES	314	BTG4 (ENSMMNG00015020784) #8	POU2AF1 (ENSMMNG00015020803) #9	POU2AF3 (ENSMMNG00015020822) #10	POU2AF2 (ENSMMNG00015020838) #11	ENSMMNG00015020858	ARHGAP20 (ENSMMNG00015020888) #12	ENSMMNG00015020921 #13	RDX (ENSMMNG00015020952) #14	ZC3H12C (ENSMMNG00015021026) #16	ENSMMNG00015021068	ENSMMNG00015021080	C11orf87 (ENSMMNG00015021100) #17	DDX10 (ENSMMNG00015021116) #18	EXPH5 (ENSMMNG00015021131) #20	POGLUT3 (ENSMMNG00015021154) #21	C11orf65 (ENSMMNG00015021178) #22	ATM (ENSMMNG00015021198) #23	NPAT (ENSMMNG00015021227) #24	ACAT1 (ENSMMNG00015021293) #26	ENSMMNG00015021311	CUL5 (ENSMMNG00015021322) #27	RAB39A (ENSMMNG00015021350) #28	ENSMMNG00015021362	SLC35F2 (ENSMMNG00015014816) #29	ENSMMNG00015014831	ELMOD1 (ENSMMNG00015014848) #30	ALKBH8 (ENSMMNG00015014868) #31	GUCY1A2 (ENSMMNG00015014900) #34	ENSMMNG00015014920	CWF19L2 (ENSMMNG00015014936) #35	AASDHPPT (ENSMMNG00015014982)
Vaquita	MODERN SPECIES	19	BTG4 (ENSPSNG00000007443) #8	ENSPSNG00000007489	POU2AF1 (ENSPSNG00000007506) #9	POU2AF3 (ENSPSNG00000007536) #10	POU2AF2 (ENSPSNG00000007586) #11	ARHGAP20 (ENSPSNG00000007657) #12	FDX1 (ENSPSNG00000007835) #13	RDX (ENSPSNG00000007869) #14	ZC3H12C (ENSPSNG00000007958) #16	ENSPSNG00000008028	C11orf87 (ENSPSNG00000008061) #17	ENSPSNG00000008073	ENSPSNG00000008091	EXPH5 (ENSPSNG00000008136) #20	POGLUT3 (ENSPSNG00000008193) #21	C11orf65 (ENSPSNG00000008266) #22	ATM (ENSPSNG00000008366) #23	NPAT (ENSPSNG00000008455) #24	CUL5 (ENSPSNG00000008548) #27	RAB39A (ENSPSNG00000008734) #28	ENSPSNG00000008761	SLC35F2 (ENSPSNG00000008805) #29	ELMOD1 (ENSPSNG00000008894) #30	ALKBH8 (ENSPSNG00000008972) #31	ENSPSNG00000009069	ENSPSNG00000009080	GUCY1A2 (ENSPSNG00000009108) #34	ENSPSNG00000009179	CWF19L2 (ENSPSNG00000009225) #35	AASDHPPT (ENSPSNG00000009261)	KBTBD3 (ENSPSNG00000009333)
Dolphin	MODERN SPECIES	1658													DDX10 (ENSTTRG00000006068) #18	EXPH5 (ENSTTRG00000006067) #20	POGLUT3 (ENSTTRG00000006066) #21	C11orf65 (ENSTTRG00000006065) #22	ATM (ENSTTRG00000006062) #23	NPAT (ENSTTRG00000006061) #24
Sperm whale	MODERN SPECIES	7	ENSPCTG00005004298	POU2AF1 (ENSPCTG00005004311) #9	POU2AF3 (ENSPCTG00005004340) #10	POU2AF2 (ENSPCTG00005004366) #11	ARHGAP20 (ENSPCTG00005004425) #12	FDX1 (ENSPCTG00005004590) #13	RDX (ENSPCTG00005004655) #14	ZC3H12C (ENSPCTG00005004817) #16	ENSPCTG00005004846	ENSPCTG00005004876	C16H11orf87 (ENSPCTG00005004900) #17	ENSPCTG00005004908	DDX10 (ENSPCTG00005004923) #18	EXPH5 (ENSPCTG00005004945) #20	POGLUT3 (ENSPCTG00005004972) #21	C16H11orf65 (ENSPCTG00005005016) #22	ATM (ENSPCTG00005005102) #23	NPAT (ENSPCTG00005005301) #24	ACAT1 (ENSPCTG00005005385) #26	CUL5 (ENSPCTG00005005470) #27	ENSPCTG00005005517	RAB39A (ENSPCTG00005005532) #28	SLC35F2 (ENSPCTG00005005561) #29	ENSPCTG00005005666	ELMOD1 (ENSPCTG00005005706) #30	ALKBH8 (ENSPCTG00005005892) #31	ENSPCTG00005005948	GUCY1A2 (ENSPCTG00005005964) #34	CWF19L2 (ENSPCTG00005006064) #35	AASDHPPT (ENSPCTG00005006202)	KBTBD3 (ENSPCTG00005006219)
Blue whale	MODERN SPECIES	19	POU2AF1 (ENSBMSG00010006194) #9	POU2AF3 (ENSBMSG00010006172) #10	POU2AF2 (ENSBMSG00010006154) #11	ENSBMSG00010006096	ARHGAP20 (ENSBMSG00010006030) #12	FDX1 (ENSBMSG00010006005) #13	RDX (ENSBMSG00010005964) #14	ZC3H12C (ENSBMSG00010005891) #16	ENSBMSG00010005874	C11orf87 (ENSBMSG00010005868) #17	ENSBMSG00010005856	DDX10 (ENSBMSG00010005845) #18	EXPH5 (ENSBMSG00010005824) #20	POGLUT3 (ENSBMSG00010005798) #21	ENSBMSG00010005777	C11orf65 (ENSBMSG00010005759) #22	ATM (ENSBMSG00010005723) #23	NPAT (ENSBMSG00010005693) #24	ACAT1 (ENSBMSG00010005661) #26	CUL5 (ENSBMSG00010005626) #27	ENSBMSG00010005612	TTC12 (ENSBMSG00010005577)	ANKK1 (ENSBMSG00010005556)	DRD2 (ENSBMSG00010005538)	TMPRSS5 (ENSBMSG00010005444)	ZW10 (ENSBMSG00010005389)	USP28 (ENSBMSG00010005292)	HTR3B (ENSBMSG00010005243)	HTR3A (ENSBMSG00010005211)	ZBTB16 (ENSBMSG00010005183)	ENSBMSG00010005174
Camelidae	ANCESTRAL SPECIES	88	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34
Arabian camel	MODERN SPECIES	26	LAYN (ENSCDRG00005021931)	HOATZ (ENSCDRG00005021930) #7	BTG4 (ENSCDRG00005021928) #8	POU2AF1 (ENSCDRG00005021927) #9	ENSCDRG00005021926 #10	POU2AF2 (ENSCDRG00005021925) #11	ENSCDRG00005021923	ENSCDRG00005021922 #13	RDX (ENSCDRG00005021921) #14	ZC3H12C (ENSCDRG00005021920) #16	C11orf87 (ENSCDRG00005021919) #17	DDX10 (ENSCDRG00005021918) #18	ENSCDRG00005021917	EXPH5 (ENSCDRG00005021916) #20	POGLUT3 (ENSCDRG00005021915) #21	C11orf65 (ENSCDRG00005021913) #22	ATM (ENSCDRG00005021893) #23	NPAT (ENSCDRG00005021853) #24	ACAT1 (ENSCDRG00005021788) #26	CUL5 (ENSCDRG00005021645) #27	RAB39A (ENSCDRG00005021603) #28	SLC35F2 (ENSCDRG00005021464) #29	ELMOD1 (ENSCDRG00005021274) #30	ENSCDRG00005020956 #35	GUCY1A2 (ENSCDRG00005020590) #34	ENSCDRG00005020457	ENSCDRG00005020357 #12
Alpaca	MODERN SPECIES	1698																C11orf65 (ENSVPAG00000003234) #22	ATM (ENSVPAG00000003230) #23	NPAT (ENSVPAG00000003229) #24	ACAT1 (ENSVPAG00000003228) #26	CUL5 (ENSVPAG00000003227) #27
Suina	ANCESTRAL SPECIES	5	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01040000240879	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000159114
Chacoan peccary	MODERN SPECIES	29	SIK2 (ENSCWAG00000003674)	LAYN (ENSCWAG00000003729)	HOATZ (ENSCWAG00000003924) #7	BTG4 (ENSCWAG00000003961) #8	POU2AF1 (ENSCWAG00000003996) #9	POU2AF3 (ENSCWAG00000004023) #10	POU2AF2 (ENSCWAG00000004067) #11	ARHGAP20 (ENSCWAG00000004131) #12	FDX1 (ENSCWAG00000004239) #13	RDX (ENSCWAG00000004280) #14	ZC3H12C (ENSCWAG00000004392) #16	C11orf87 (ENSCWAG00000004468) #17	DDX10 (ENSCWAG00000004510) #18	EXPH5 (ENSCWAG00000004712) #20	POGLUT3 (ENSCWAG00000004854) #21	C11orf65 (ENSCWAG00000004880) #22	ATM (ENSCWAG00000004934) #23	NPAT (ENSCWAG00000004989) #24	ACAT1 (ENSCWAG00000005023) #26	CUL5 (ENSCWAG00000005071) #27	RAB39A (ENSCWAG00000005118) #28	SLC35F2 (ENSCWAG00000005147) #29	ENSCWAG00000005234	ELMOD1 (ENSCWAG00000005287) #30	ALKBH8 (ENSCWAG00000005467) #31	CWF19L2 (ENSCWAG00000005525) #35	AASDHPPT (ENSCWAG00000005548)	KBTBD3 (ENSCWAG00000005570)	MSANTD4 (ENSCWAG00000005595)	GRIA4 (ENSCWAG00000005641)	ENSCWAG00000006028
Pig	MODERN SPECIES	17	SIK2 (ENSSSCG00000032941)	LAYN (ENSSSCG00000015022)	HOATZ (ENSSSCG00000015021) #7	BTG4 (ENSSSCG00000015020) #8	POU2AF1 (ENSSSCG00000015016) #9	POU2AF3 (ENSSSCG00000015019) #10	POU2AF2 (ENSSSCG00000015018) #11	ARHGAP20 (ENSSSCG00000015015) #12	FDX1 (ENSSSCG00000035945) #13	RDX (ENSSSCG00000015013) #14	ZC3H12C (ENSSSCG00000015014) #16	C11orf87 (ENSSSCG00000036943) #17	ENSSSCG00000015011	EXPH5 (ENSSSCG00000015010) #20	POGLUT3 (ENSSSCG00000015009) #21	C11orf65 (ENSSSCG00000015008) #22	ATM (ENSSSCG00000025606) #23	NPAT (ENSSSCG00000026959) #24	ACAT1 (ENSSSCG00000026153) #26	CUL5 (ENSSSCG00000029198) #27	ENSSSCG00000035345	RAB39A (ENSSSCG00000031723) #28	SLC35F2 (ENSSSCG00000015001) #29	ENSSSCG00000058217	SLN (ENSSSCG00000029651)	ELMOD1 (ENSSSCG00000015002) #30	ALKBH8 (ENSSSCG00000024628) #31	ENSSSCG00000056752	CWF19L2 (ENSSSCG00000028201) #35	KBTBD3 (ENSSSCG00000014999)	AASDHPPT (ENSSSCG00000014998)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Laurasiatheria_c	ANCESTRAL SPECIES	23	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000265805	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Chiroptera	ANCESTRAL SPECIES	33	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000265805	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000015352.n	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Megabat	MODERN SPECIES	2798																ENSPVAG00000016406 #22	ATM (ENSPVAG00000016400) #23	NPAT (ENSPVAG00000016398) #24	ACAT1 (ENSPVAG00000016395) #26
Microchiroptera	ANCESTRAL SPECIES	34	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000265805	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000015352.n	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Greater horseshoe bat	MODERN SPECIES	2	MSANTD4 (ENSRFEG00010008997)	KBTBD3 (ENSRFEG00010009026)	AASDHPPT (ENSRFEG00010009049)	ENSRFEG00010009091	GUCY1A2 (ENSRFEG00010009109) #34	ENSRFEG00010009134	CWF19L2 (ENSRFEG00010009178) #35	ALKBH8 (ENSRFEG00010009220) #31	ELMOD1 (ENSRFEG00010009290) #30	ENSRFEG00010009424	SLC35F2 (ENSRFEG00010009447) #29	RAB39A (ENSRFEG00010009515) #28	CUL5 (ENSRFEG00010009566) #27	EXPH5 (ENSRFEG00010009629) #20	POGLUT3 (ENSRFEG00010009660) #21	C11orf65 (ENSRFEG00010009749) #22	ATM (ENSRFEG00010009837) #23	ENSRFEG00010009954	NPAT (ENSRFEG00010009984) #24	ACAT1 (ENSRFEG00010010049) #26	DDX10 (ENSRFEG00010010069) #18	ENSRFEG00010010141	C11orf87 (ENSRFEG00010010156) #17	ZC3H12C (ENSRFEG00010010192) #16	RDX (ENSRFEG00010010314) #14	ENSRFEG00010010451 #13	ARHGAP20 (ENSRFEG00010010551) #12	POU2AF2 (ENSRFEG00010011003) #11	POU2AF3 (ENSRFEG00010011079) #10	POU2AF1 (ENSRFEG00010011189) #9	BTG4 (ENSRFEG00010011226) #8
Equus	ANCESTRAL SPECIES	25	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT01090000263368	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000162555
Horse	MODERN SPECIES	28	HOATZ (ENSECAG00000015877) #7	BTG4 (ENSECAG00000012564) #8	POU2AF1 (ENSECAG00000011348) #9	POU2AF3 (ENSECAG00000010274) #10	POU2AF2 (ENSECAG00000010032) #11	ENSECAG00000057665	ARHGAP20 (ENSECAG00000019958) #12	ENSECAG00000043895	FDX1 (ENSECAG00000017714) #13	RDX (ENSECAG00000002920) #14	ZC3H12C (ENSECAG00000000462) #16	ENSECAG00000056829	C7H11orf87 (ENSECAG00000005641) #17	DDX10 (ENSECAG00000010355) #18	EXPH5 (ENSECAG00000008643) #20	C7H11orf65 (ENSECAG00000023635) #22	ATM (ENSECAG00000021147) #23	NPAT (ENSECAG00000008226) #24	ACAT1 (ENSECAG00000020128) #26	ENSECAG00000050219	CUL5 (ENSECAG00000024437) #27	RAB39A (ENSECAG00000024148) #28	SLC35F2 (ENSECAG00000019266) #29	ELMOD1 (ENSECAG00000010926) #30	ALKBH8 (ENSECAG00000019425) #31	CWF19L2 (ENSECAG00000004314) #35	GUCY1A2 (ENSECAG00000018191) #34	AASDHPPT (ENSECAG00000013032)	KBTBD3 (ENSECAG00000012801)	MSANTD4 (ENSECAG00000011320)	GRIA4 (ENSECAG00000009916)
Donkey	MODERN SPECIES	12	BTG4 (ENSEASG00005010081) #8	POU2AF1 (ENSEASG00005037560) #9	POU2AF3 (ENSEASG00005010085) #10	POU2AF2 (ENSEASG00005038793) #11	ARHGAP20 (ENSEASG00005010090) #12	ENSEASG00005036815 #13	RDX (ENSEASG00005010095) #14	ZC3H12C (ENSEASG00005010098) #16	ENSEASG00005010099	ENSEASG00005010101	C11orf87 (ENSEASG00005038755) #17	ENSEASG00005031476	DDX10 (ENSEASG00005010110) #18	EXPH5 (ENSEASG00005010113) #20	POGLUT3 (ENSEASG00005010114) #21	C11orf65 (ENSEASG00005010115) #22	ENSEASG00005010259 #23	ENSEASG00005026237 #23	ENSEASG00005024929	ENSEASG00005037930 #24	ACAT1 (ENSEASG00005010749) #26	CUL5 (ENSEASG00005010757) #27	RAB39A (ENSEASG00005029695) #28	SLC35F2 (ENSEASG00005011006) #29	ELMOD1 (ENSEASG00005011008) #30	ALKBH8 (ENSEASG00005011010) #31	CWF19L2 (ENSEASG00005011011) #35	GUCY1A2 (ENSEASG00005011012) #34	AASDHPPT (ENSEASG00005011016)	KBTBD3 (ENSEASG00005011019)	MSANTD4 (ENSEASG00005011020)
Carnivora	ANCESTRAL SPECIES	21	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Caniformia	ANCESTRAL SPECIES	17	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000264760	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000264760	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Ursidae	ANCESTRAL SPECIES	15	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00940000154509.q.b	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000264760	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Giant Panda	MODERN SPECIES	18	LAYN (ENSAMEG00000004312)	HOATZ (ENSAMEG00000030155) #7	BTG4 (ENSAMEG00000004327) #8	POU2AF1 (ENSAMEG00000029072) #9	POU2AF3 (ENSAMEG00000004344) #10	POU2AF2 (ENSAMEG00000023615) #11	ARHGAP20 (ENSAMEG00000009124) #12	FDX1 (ENSAMEG00000009142) #13	RDX (ENSAMEG00000009147) #14	ZC3H12C (ENSAMEG00000009188) #16	ENSAMEG00000024316	C11orf87 (ENSAMEG00000028662) #17	DDX10 (ENSAMEG00000009232) #18	EXPH5 (ENSAMEG00000009285) #20	POGLUT3 (ENSAMEG00000009298) #21	C11orf65 (ENSAMEG00000016740) #22	ATM (ENSAMEG00000016741) #23	ACAT1 (ENSAMEG00000016770) #26	CUL5 (ENSAMEG00000016779) #27	RAB39A (ENSAMEG00000002249) #28	SLC35F2 (ENSAMEG00000002230) #29	ENSAMEG00000019353	ELMOD1 (ENSAMEG00000002195) #30	ALKBH8 (ENSAMEG00000002177) #31	CWF19L2 (ENSAMEG00000015500) #35	ENSAMEG00000019460	GUCY1A2 (ENSAMEG00000014522) #34	AASDHPPT (ENSAMEG00000000370)	KBTBD3 (ENSAMEG00000000382)	ENSAMEG00000000384	ENSAMEG00000000390
Ursus	ANCESTRAL SPECIES	17	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00940000154509.q.b	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT01030000234886
Polar bear	MODERN SPECIES	166	BTG4 (ENSUMAG00000007240) #8	POU2AF1 (ENSUMAG00000007243) #9	POU2AF3 (ENSUMAG00000007245) #10	POU2AF2 (ENSUMAG00000007248) #11	ARHGAP20 (ENSUMAG00000007259) #12	ENSUMAG00000007260 #13	RDX (ENSUMAG00000007273) #14	ZC3H12C (ENSUMAG00000007283) #16	ENSUMAG00000007287	C11orf87 (ENSUMAG00000007292) #17	ENSUMAG00000007293	DDX10 (ENSUMAG00000007300) #18	ENSUMAG00000007365	EXPH5 (ENSUMAG00000007368) #20	POGLUT3 (ENSUMAG00000007380) #21	C11orf65 (ENSUMAG00000007388) #22	ATM (ENSUMAG00000007491) #23	NPAT (ENSUMAG00000008659) #24	ACAT1 (ENSUMAG00000008664) #26	CUL5 (ENSUMAG00000008690) #27	ENSUMAG00000008701 #28	SLC35F2 (ENSUMAG00000008709) #29	ELMOD1 (ENSUMAG00000008718) #30	ALKBH8 (ENSUMAG00000008743) #31	CWF19L2 (ENSUMAG00000008758) #35	GUCY1A2 (ENSUMAG00000008864) #34	ENSUMAG00000008866	AASDHPPT (ENSUMAG00000008871)	KBTBD3 (ENSUMAG00000008879)	MSANTD4 (ENSUMAG00000008883)	GRIA4 (ENSUMAG00000008904)
Mustelinae	ANCESTRAL SPECIES	111											ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000264760	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
American mink	MODERN SPECIES	382												ENSNVIG00000024527	DDX10 (ENSNVIG00000024516) #18	EXPH5 (ENSNVIG00000024504) #20	POGLUT3 (ENSNVIG00000024497) #21	C11orf65 (ENSNVIG00000024478) #22	ATM (ENSNVIG00000024437) #23	NPAT (ENSNVIG00000024434) #24	ACAT1 (ENSNVIG00000024420) #26	CUL5 (ENSNVIG00000024393) #27	RAB39A (ENSNVIG00000024387) #28	SLC35F2 (ENSNVIG00000024370) #29	ENSNVIG00000024368	ELMOD1 (ENSNVIG00000024353) #30	ALKBH8 (ENSNVIG00000024329) #31
Canidae	ANCESTRAL SPECIES	27	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000159989.i.b	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000163894	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000017443.g.a.a	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Canis_lupus	ANCESTRAL SPECIES	28	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000159989.i.b	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00940000172808	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00940000162741.j.k	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000163894	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000017443.g.a.a	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Dog	MODERN SPECIES	33	COLCA2 (ENSCAFG00845002654) #10	POU2AF2 (ENSCAFG00845002682) #11	ENSCAFG00845002692 #15	ENSCAFG00845002745 #12	ENSCAFG00845002849	ENSCAFG00845002863	FDX1 (ENSCAFG00845002886) #13	RDX (ENSCAFG00845002972) #14	ZC3H12C (ENSCAFG00845003069) #16	ENSCAFG00845003205	C11orf87 (ENSCAFG00845003273) #17	DDX10 (ENSCAFG00845003310) #18	EXPH5 (ENSCAFG00845003361) #20	POGLUT3 (ENSCAFG00845003378) #21	ENSCAFG00845003413	C5H11orf65 (ENSCAFG00845003421) #22	ATM (ENSCAFG00845003472) #23	NPAT (ENSCAFG00845003530) #24	ACAT1 (ENSCAFG00845003582) #26	CUL5 (ENSCAFG00845003623) #27	ENSCAFG00845003643	RAB39A (ENSCAFG00845003650) #28	SLC35F2 (ENSCAFG00845003658) #29	ENSCAFG00845003675	SLN (ENSCAFG00845003683)	ELMOD1 (ENSCAFG00845003730) #30	ALKBH8 (ENSCAFG00845003777) #31	CWF19L2 (ENSCAFG00845003823) #35	GUCY1A2 (ENSCAFG00845003912) #34	ENSCAFG00845003965	AASDHPPT (ENSCAFG00845004003)
Dingo	MODERN SPECIES	214	POU2AF3 (ENSCAFG00020006830) #10	POU2AF2 (ENSCAFG00020006833) #11	ENSCAFG00020006843 ##15	ENSCAFG00020006857	ARHGAP20 (ENSCAFG00020006864) #12	ENSCAFG00020006871	FDX1 (ENSCAFG00020006888) #13	RDX (ENSCAFG00020006896) #14	ZC3H12C (ENSCAFG00020006999) #16	ENSCAFG00020007020	C11orf87 (ENSCAFG00020007045) #17	DDX10 (ENSCAFG00020007058) #18	EXPH5 (ENSCAFG00020007067) #20	POGLUT3 (ENSCAFG00020007097) #21	ENSCAFG00020007106	C11orf65 (ENSCAFG00020007145) #22	ATM (ENSCAFG00020007155) #23	NPAT (ENSCAFG00020007288) #24	ACAT1 (ENSCAFG00020007312) #26	CUL5 (ENSCAFG00020007388) #27	ENSCAFG00020008825	RAB39A (ENSCAFG00020008828) #28	SLC35F2 (ENSCAFG00020008833) #29	ELMOD1 (ENSCAFG00020008836) #30	ENSCAFG00020008866	ALKBH8 (ENSCAFG00020008876) #31	CWF19L2 (ENSCAFG00020008885) #35	GUCY1A2 (ENSCAFG00020008933) #34	ENSCAFG00020008979	AASDHPPT (ENSCAFG00020008990)	KBTBD3 (ENSCAFG00020008995)
Red fox	MODERN SPECIES	61	BTG4 (ENSVVUG00000015790) #8	POU2AF1 (ENSVVUG00000015766) #9	COLCA2 (ENSVVUG00000015759) #10	POU2AF2 (ENSVVUG00000015755) #11	ARHGAP20 (ENSVVUG00000015612) #12	ENSVVUG00000015600	ENSVVUG00000015592 #13	RDX (ENSVVUG00000015566) #14	ENSVVUG00000015552 #16	ENSVVUG00000015542	C11orf87 (ENSVVUG00000015518) #17	ENSVVUG00000015501	DDX10 (ENSVVUG00000015484) #18	EXPH5 (ENSVVUG00000015475) #20	POGLUT3 (ENSVVUG00000015460) #21	CUNH11orf65 (ENSVVUG00000015456) #22	ATM (ENSVVUG00000014332) #23	NPAT (ENSVVUG00000014091) #24	ACAT1 (ENSVVUG00000014076) #26	ENSVVUG00000014072	CUL5 (ENSVVUG00000014050) #27	ENSVVUG00000014044 #28	SLC35F2 (ENSVVUG00000014033) #29	ENSVVUG00000014026	ELMOD1 (ENSVVUG00000014009) #30	ALKBH8 (ENSVVUG00000013994) #31	ENSVVUG00000013987 #35	ENSVVUG00000013985	GUCY1A2 (ENSVVUG00000013971) #34	ENSVVUG00000013969	ENSVVUG00000013968
Felidae	ANCESTRAL SPECIES		ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT00390000005254.i.b	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000015352.o.b	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Panthera	ANCESTRAL SPECIES	26	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT00390000005254.i.b	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000015352.o.b	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Panthera_a	ANCESTRAL SPECIES	29	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT00390000005254.i.b	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000015352.o.b	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
leopard	MODERN SPECIES	54	SIK2 (ENSPPRG00000001032)	LAYN (ENSPPRG00000000578)	HOATZ (ENSPPRG00000023148) #7	BTG4 (ENSPPRG00000022090) #8	POU2AF1 (ENSPPRG00000020717) #9	POU2AF3 (ENSPPRG00000018973) #10	POU2AF2 (ENSPPRG00000014820) #11	ARHGAP20 (ENSPPRG00000013980) #12	FDX1 (ENSPPRG00000011447) #13	ENSPPRG00000015609	RDX (ENSPPRG00000010560) #14	ZC3H12C (ENSPPRG00000006582) #16	C11orf87 (ENSPPRG00000015366) #17	DDX10 (ENSPPRG00000005990) #18	POGLUT3 (ENSPPRG00000002881) #21	C11orf65 (ENSPPRG00000002213) #22	ATM (ENSPPRG00000001174) #23	NPAT (ENSPPRG00000022955) #24	ACAT1 (ENSPPRG00000023179) #26	CUL5 (ENSPPRG00000023452) #27	RAB39A (ENSPPRG00000023742) #28	SLC35F2 (ENSPPRG00000022590) #29	SLN (ENSPPRG00000015013)	ELMOD1 (ENSPPRG00000020066) #30	ALKBH8 (ENSPPRG00000017697) #31	CWF19L2 (ENSPPRG00000012736) #35	ENSPPRG00000012049	GUCY1A2 (ENSPPRG00000011788) #34
lion	MODERN SPECIES	10	LAYN (ENSPLOG00000012112)	HOATZ (ENSPLOG00000012025) #7	BTG4 (ENSPLOG00000011880) #8	POU2AF1 (ENSPLOG00000011798) #9	POU2AF3 (ENSPLOG00000011748) #10	POU2AF2 (ENSPLOG00000011666) #11	ARHGAP20 (ENSPLOG00000011147) #12	FDX1 (ENSPLOG00000011029) #13	ENSPLOG00000011006	RDX (ENSPLOG00000022204) #14	ZC3H12C (ENSPLOG00000022181) #16	C11orf87 (ENSPLOG00000022168) #17	DDX10 (ENSPLOG00000022097) #18	EXPH5 (ENSPLOG00000022082) #20	POGLUT3 (ENSPLOG00000022067) #21	C11orf65 (ENSPLOG00000022057) #22	ATM (ENSPLOG00000021964) #23	NPAT (ENSPLOG00000021890) #24	ACAT1 (ENSPLOG00000021818) #26	CUL5 (ENSPLOG00000021627) #27	RAB39A (ENSPLOG00000021531) #28	SLC35F2 (ENSPLOG00000021519) #29	ENSPLOG00000021511	ELMOD1 (ENSPLOG00000021429) #30	ALKBH8 (ENSPLOG00000021289) #31	CWF19L2 (ENSPLOG00000021204) #35	ENSPLOG00000021113	GUCY1A2 (ENSPLOG00000021082) #34	AASDHPPT (ENSPLOG00000021049)	KBTBD3 (ENSPLOG00000021027)	MSANTD4 (ENSPLOG00000021006)
Tiger	MODERN SPECIES	104										ARHGAP20 (ENSPTIG00000009465) #12	FDX1 (ENSPTIG00000009570) #13	RDX (ENSPTIG00000009668) #14	ZC3H12C (ENSPTIG00000009995) #16	DDX10 (ENSPTIG00000010152) #18	POGLUT3 (ENSPTIG00000010545) #21	C11orf65 (ENSPTIG00000010562) #22	ATM (ENSPTIG00000010642) #23	NPAT (ENSPTIG00000010746) #24	ACAT1 (ENSPTIG00000010779) #26	CUL5 (ENSPTIG00000010822) #27	RAB39A (ENSPTIG00000010919) #28	SLC35F2 (ENSPTIG00000010937) #29	SLN (ENSPTIG00000008170)	ELMOD1 (ENSPTIG00000011016) #30	ALKBH8 (ENSPTIG00000011062) #31	CWF19L2 (ENSPTIG00000011569) #35
Eulipotyphla	ANCESTRAL SPECIES	165																ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27
Hedgehog	MODERN SPECIES	4541																C11orf65 (ENSEEUG00000008706) #22	ATM (ENSEEUG00000007641) #23
Common shrew	MODERN SPECIES	10611																C11orf65 (ENSSARG00000005936) #22
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Primates	ANCESTRAL SPECIES		ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Haplorrhini	ANCESTRAL SPECIES		ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Simiiformes	ANCESTRAL SPECIES		ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.m #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.m #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Macaca	ANCESTRAL SPECIES	2	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.m #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00950000183066.a.a.b	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.m #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263493.a.b.a.a.a.a.a.a.b.b.b	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Crab-eating macaque	MODERN SPECIES	5	PPP2R1B (ENSMFAG00000046304)	SIK2 (ENSMFAG00000045653)	LAYN (ENSMFAG00000032480)	HOATZ (ENSMFAG00000036781) #7	BTG4 (ENSMFAG00000036753) #8	POU2AF1 (ENSMFAG00000042921) #9	ENSMFAG00000043291 #10	POU2AF2 (ENSMFAG00000034174) #11	ARHGAP20 (ENSMFAG00000036507) #12	FDX1 (ENSMFAG00000039761) #13	RDX (ENSMFAG00000031656) #14	ZC3H12C (ENSMFAG00000042068) #16	ENSMFAG00000040157 #17	DDX10 (ENSMFAG00000045808) #18	EXPH5 (ENSMFAG00000018860) #20	C11orf65 (ENSMFAG00000042308) #22	ATM (ENSMFAG00000004053) #23	NPAT (ENSMFAG00000034204) #24	ACAT1 (ENSMFAG00000044957) #26	CUL5 (ENSMFAG00000038493) #27	ENSMFAG00000057794	RAB39A (ENSMFAG00000043510) #28	SLC35F2 (ENSMFAG00000041696) #29	ENSMFAG00000054322	ENSMFAG00000054046	ELMOD1 (ENSMFAG00000039699) #30	ALKBH8 (ENSMFAG00000003178) #31	ENSMFAG00000064125	ENSMFAG00000038804 #35	ENSMFAG00000054943	GUCY1A2 (ENSMFAG00000034683) #34
Pig-tailed macaque	MODERN SPECIES	204	HOATZ (ENSMNEG00000038512) #7	BTG4 (ENSMNEG00000028670) #8	POU2AF1 (ENSMNEG00000042844) #9	POU2AF3 (ENSMNEG00000036284) #10	POU2AF2 (ENSMNEG00000044667) #11	ARHGAP20 (ENSMNEG00000042524) #12	FDX1 (ENSMNEG00000006503) #13	RDX (ENSMNEG00000042245) #14	ZC3H12C (ENSMNEG00000032663) #16	ENSMNEG00000033452	C11orf87 (ENSMNEG00000024831) #17	ENSMNEG00000042452	DDX10 (ENSMNEG00000033513) #18	EXPH5 (ENSMNEG00000005435) #20	POGLUT3 (ENSMNEG00000030579) #21	C11orf65 (ENSMNEG00000031879) #22	ATM (ENSMNEG00000004901) #23	NPAT (ENSMNEG00000029307) #24	ACAT1 (ENSMNEG00000037425) #26	CUL5 (ENSMNEG00000031821) #27	RAB39A (ENSMNEG00000037136) #28	SLC35F2 (ENSMNEG00000041099) #29	SLN (ENSMNEG00000026545)	ELMOD1 (ENSMNEG00000039374) #30	ALKBH8 (ENSMNEG00000041672) #31	CWF19L2 (ENSMNEG00000038771) #35	ENSMNEG00000043288	ENSMNEG00000036279 #34	AASDHPPT (ENSMNEG00000032892)	KBTBD3 (ENSMNEG00000041894)	MSANTD4 (ENSMNEG00000028862)
Cercopithecinae_b	ANCESTRAL SPECIES	21	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.m #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Olive baboon	MODERN SPECIES	3	POU2AF1 (ENSPANG00000040104) #9	POU2AF3 (ENSPANG00000008131) #10	POU2AF2 (ENSPANG00000019123) #11	ARHGAP20 (ENSPANG00000008965) #12	ENSPANG00000045078	FDX1 (ENSPANG00000009432) #13	RDX (ENSPANG00000015381) #14	ZC3H12C (ENSPANG00000023930) #16	ENSPANG00000040556	ENSPANG00000044051 #17	ENSPANG00000043101	ENSPANG00000044773	DDX10 (ENSPANG00000015325) #18	EXPH5 (ENSPANG00000003385) #20	POGLUT3 (ENSPANG00000022853) #21	C11orf65 (ENSPANG00000051088) #22	ATM (ENSPANG00000019174) #23	NPAT (ENSPANG00000026022) #24	ACAT1 (ENSPANG00000010010) #26	CUL5 (ENSPANG00000007952) #27	RAB39A (ENSPANG00000044333) #28	SLC35F2 (ENSPANG00000007636) #29	ENSPANG00000038310	SLN (ENSPANG00000034548)	ELMOD1 (ENSPANG00000004866) #30	ALKBH8 (ENSPANG00000010011) #31	CWF19L2 (ENSPANG00000012746) #35	ENSPANG00000050440	ENSPANG00000046002	GUCY1A2 (ENSPANG00000006437) #34	AASDHPPT (ENSPANG00000019124)
Cercopithecinae_d	ANCESTRAL SPECIES	45	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.m #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Sooty mangabey	MODERN SPECIES	138	SIK2 (ENSCATG00000035649)	LAYN (ENSCATG00000042864)	HOATZ (ENSCATG00000012410) #7	BTG4 (ENSCATG00000021924) #8	POU2AF1 (ENSCATG00000039907) #9	POU2AF3 (ENSCATG00000035023) #10	POU2AF2 (ENSCATG00000039852) #11	ARHGAP20 (ENSCATG00000037266) #12	FDX1 (ENSCATG00000029996) #13	ENSCATG00000038708 #14	ZC3H12C (ENSCATG00000041641) #16	C11orf87 (ENSCATG00000016537) #17	DDX10 (ENSCATG00000028487) #18	EXPH5 (ENSCATG00000031656) #20	POGLUT3 (ENSCATG00000036542) #21	C11orf65 (ENSCATG00000042226) #22	ATM (ENSCATG00000039377) #23	NPAT (ENSCATG00000008696) #24	ACAT1 (ENSCATG00000029794) #26	CUL5 (ENSCATG00000034963) #27	RAB39A (ENSCATG00000020707) #28	SLC35F2 (ENSCATG00000038785) #29	SLN (ENSCATG00000013494)	ELMOD1 (ENSCATG00000011279) #30	ALKBH8 (ENSCATG00000035864) #31	CWF19L2 (ENSCATG00000044106) #35	ENSCATG00000022017	GUCY1A2 (ENSCATG00000037410) #34	AASDHPPT (ENSCATG00000043976)	KBTBD3 (ENSCATG00000044798)	MSANTD4 (ENSCATG00000030475)
Drill	MODERN SPECIES	905												ENSMLEG00000044120	DDX10 (ENSMLEG00000044081) #18	EXPH5 (ENSMLEG00000031409) #20	POGLUT3 (ENSMLEG00000030293) #21	C11orf65 (ENSMLEG00000036417) #22	ATM (ENSMLEG00000035852) #23	NPAT (ENSMLEG00000039127) #24	ACAT1 (ENSMLEG00000026923) #26	CUL5 (ENSMLEG00000038735) #27	RAB39A (ENSMLEG00000034160) #28	SLC35F2 (ENSMLEG00000031766) #29	SLN (ENSMLEG00000023787)	ELMOD1 (ENSMLEG00000039814) #30	ALKBH8 (ENSMLEG00000029986) #31	CWF19L2 (ENSMLEG00000035335) #35	ENSMLEG00000035787
Vervet Monkey	MODERN SPECIES		HOATZ (ENSCSAG00000002907) #7	BTG4 (ENSCSAG00000002908) #8	ENSCSAG00000002909	POU2AF1 (ENSCSAG00000002913) #9	POU2AF3 (ENSCSAG00000002915) #10	POU2AF2 (ENSCSAG00000002917) #11	ARHGAP20 (ENSCSAG00000002920) #12	FDX1 (ENSCSAG00000002924) #13	RDX (ENSCSAG00000002938) #14	ZC3H12C (ENSCSAG00000002945) #16	C11orf87 (ENSCSAG00000000599) #17	ENSCSAG00000000600	DDX10 (ENSCSAG00000002948) #18	EXPH5 (ENSCSAG00000002951) #20	POGLUT3 (ENSCSAG00000002956) #21	C11orf65 (ENSCSAG00000002961) #22	ATM (ENSCSAG00000002971) #23	NPAT (ENSCSAG00000002976) #24	ACAT1 (ENSCSAG00000002996) #26	CUL5 (ENSCSAG00000003003) #27	RAB39A (ENSCSAG00000003008) #28	SLC35F2 (ENSCSAG00000003013) #29	SLN (ENSCSAG00000000601)	ELMOD1 (ENSCSAG00000003018) #30	ENSCSAG00000003020	ALKBH8 (ENSCSAG00000003027) #31	CWF19L2 (ENSCSAG00000003032) #35	GUCY1A2 (ENSCSAG00000003037) #34	ENSCSAG00000000602	AASDHPPT (ENSCSAG00000003042)	KBTBD3 (ENSCSAG00000003044)
Rhinopithecus	ANCESTRAL SPECIES	194	ENSGT00390000003821	ENSGT00390000015467	ENSGT00940000157017.b	ENSGT00940000160899	ENSGT00390000000289	ENSGT00940000161021	ENSGT00390000013329	ENSGT00940000154355.f.g.a	ENSGT00940000161439	ENSGT00950000183110.b.a	ENSGT00390000013841	ENSGT00390000012905 #17	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31
Golden snub-nosed monkey	MODERN SPECIES	917																C11orf65 (ENSRROG00000042578) #22	ENSRROG00000040216	ATM (ENSRROG00000039466) #23	NPAT (ENSRROG00000042980) #24	ACAT1 (ENSRROG00000035049) #26	CUL5 (ENSRROG00000031340) #27	RAB39A (ENSRROG00000028908) #28	SLC35F2 (ENSRROG00000041907) #29	ENSRROG00000005684	ELMOD1 (ENSRROG00000026242) #30	ALKBH8 (ENSRROG00000039484) #31
Black snub-nosed monkey	MODERN SPECIES	1759													DDX10 (ENSRBIG00000040612) #18	EXPH5 (ENSRBIG00000039020) #20	POGLUT3 (ENSRBIG00000028735) #21	C11orf65 (ENSRBIG00000037574) #22	ATM (ENSRBIG00000034107) #23	NPAT (ENSRBIG00000036504) #24	ACAT1 (ENSRBIG00000020193) #26	CUL5 (ENSRBIG00000031716) #27	RAB39A (ENSRBIG00000004655) #28	SLC35F2 (ENSRBIG00000040852) #29	SLN (ENSRBIG00000027162)	ELMOD1 (ENSRBIG00000007093) #30	ALKBH8 (ENSRBIG00000032575) #31
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.k #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000155315.n	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663
Hominidae	ANCESTRAL SPECIES	1	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00410000028767	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.k #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000155315.n	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.k #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000155315.n	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.k #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469
Pan	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b.k #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00910000147346	ENSGT00550000074980.a #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01090000260451	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00910000148557	ENSGT00940000155627 #35	ENSGT00390000004524.c.a.a.a.a.a.a	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Bonobo	MODERN SPECIES	2	LAYN (ENSPPAG00000041584)	HOATZ (ENSPPAG00000028463) #7	BTG4 (ENSPPAG00000043008) #8	POU2AF1 (ENSPPAG00000027335) #9	POU2AF3 (ENSPPAG00000030384) #10	POU2AF2 (ENSPPAG00000037435) #11	ARHGAP20 (ENSPPAG00000039270) #12	ENSPPAG00000032618 #13	RDX (ENSPPAG00000040677) #14	ZC3H12C (ENSPPAG00000041914) #16	C11orf87 (ENSPPAG00000001984) #17	ENSPPAG00000029102	DDX10 (ENSPPAG00000035222) #18	EXPH5 (ENSPPAG00000004529) #20	POGLUT3 (ENSPPAG00000029797) #21	C11orf65 (ENSPPAG00000031914) #22	ATM (ENSPPAG00000027747) #23	NPAT (ENSPPAG00000043838) #24	ACAT1 (ENSPPAG00000035088) #26	CUL5 (ENSPPAG00000034615) #27	RAB39A (ENSPPAG00000043361) #28	SLC35F2 (ENSPPAG00000011742) #29	ENSPPAG00000036076	ELMOD1 (ENSPPAG00000041230) #30	ALKBH8 (ENSPPAG00000012183) #31	ENSPPAG00000042965	CWF19L2 (ENSPPAG00000023443) #35	ENSPPAG00000037738	ENSPPAG00000043185 #34	AASDHPPT (ENSPPAG00000030173)	KBTBD3 (ENSPPAG00000043957)
Chimpanzee	MODERN SPECIES	2	LAYN (ENSPTRG00000028398)	HOATZ (ENSPTRG00000004266) #7	BTG4 (ENSPTRG00000004265) #8	POU2AF1 (ENSPTRG00000004264) #9	POU2AF3 (ENSPTRG00000033733) #10	POU2AF2 (ENSPTRG00000004263) #11	ARHGAP20 (ENSPTRG00000004261) #12	FDX1 (ENSPTRG00000004260) #13	RDX (ENSPTRG00000004259) #14	ZC3H12C (ENSPTRG00000050494) #16	C11H11orf87 (ENSPTRG00000048760) #17	ENSPTRG00000044009	DDX10 (ENSPTRG00000004256) #18	EXPH5 (ENSPTRG00000004254) #20	POGLUT3 (ENSPTRG00000004253) #21	C11H11orf65 (ENSPTRG00000004252) #22	ATM (ENSPTRG00000004250) #23	NPAT (ENSPTRG00000004248) #24	ACAT1 (ENSPTRG00000004247) #26	CUL5 (ENSPTRG00000004246) #27	RAB39A (ENSPTRG00000049354) #28	SLC35F2 (ENSPTRG00000004244) #29	SLN (ENSPTRG00000048017)	ELMOD1 (ENSPTRG00000004241) #30	ALKBH8 (ENSPTRG00000004240) #31	ENSPTRG00000047347	CWF19L2 (ENSPTRG00000004239) #35	ENSPTRG00000045119	GUCY1A2 (ENSPTRG00000004238) #34	AASDHPPT (ENSPTRG00000004236)	KBTBD3 (ENSPTRG00000004235)
Human	MODERN SPECIES	2	SIK2 (ENSG00000170145)	LAYN (ENSG00000204381)	HOATZ (ENSG00000183644) #7	BTG4 (ENSG00000137707) #8	POU2AF1 (ENSG00000110777) #9	POU2AF3 (ENSG00000214290) #10	POU2AF2 (ENSG00000150750) #11	ARHGAP20 (ENSG00000137727) #12	FDX1 (ENSG00000137714) #13	ZC3H12C (ENSG00000149289) #16	RDX (ENSG00000137710) #14	C11orf87 (ENSG00000185742) #17	DDX10 (ENSG00000178105) #18	EXPH5 (ENSG00000110723) #20	POGLUT3 (ENSG00000178202) #21	C11orf65 (ENSG00000166323) #22	ATM (ENSG00000149311) #23	NPAT (ENSG00000149308) #24	ACAT1 (ENSG00000075239) #26	CUL5 (ENSG00000166266) #27	RAB39A (ENSG00000179331) #28	SLC35F2 (ENSG00000110660) #29	SLN (ENSG00000170290)	ELMOD1 (ENSG00000110675) #30	ALKBH8 (ENSG00000137760) #31	CWF19L2 (ENSG00000152404) #35	GUCY1A2 (ENSG00000152402) #34	AASDHPPT (ENSG00000149313)	KBTBD3 (ENSG00000182359)	MSANTD4 (ENSG00000170903)	GRIA4 (ENSG00000152578)
Orangutan	MODERN SPECIES	2	HOATZ (ENSPPYG00000034861) #7	BTG4 (ENSPPYG00000003860) #8	POU2AF1 (ENSPPYG00000003859) #9	ENSPPYG00000003858 #10	ENSPPYG00000003857	POU2AF2 (ENSPPYG00000003856) #11	ARHGAP20 (ENSPPYG00000003854) #12	FDX1 (ENSPPYG00000003853) #13	RDX (ENSPPYG00000003852) #14	ZC3H12C (ENSPPYG00000003851) #16	ENSPPYG00000035153	C11H11orf87 (ENSPPYG00000003850) #17	DDX10 (ENSPPYG00000003849) #18	EXPH5 (ENSPPYG00000040017) #20	POGLUT3 (ENSPPYG00000003847) #21	C11orf65 (ENSPPYG00000003846) #22	ATM (ENSPPYG00000003845) #23	NPAT (ENSPPYG00000003844) #24	ACAT1 (ENSPPYG00000003843) #26	CUL5 (ENSPPYG00000003842) #27	RAB39A (ENSPPYG00000003841) #28	SLC35F2 (ENSPPYG00000003840) #29	SLN (ENSPPYG00000003837)	ENSPPYG00000003836	ELMOD1 (ENSPPYG00000003835) #30	ALKBH8 (ENSPPYG00000003834) #31	ENSPPYG00000034618	CWF19L2 (ENSPPYG00000003833) #35	GUCY1A2 (ENSPPYG00000003832) #34	AASDHPPT (ENSPPYG00000003831)	KBTBD3 (ENSPPYG00000032968)
Gibbon	MODERN SPECIES	5	BTG4 (ENSNLEG00000007257) #8	POU2AF1 (ENSNLEG00000036228) #9	POU2AF3 (ENSNLEG00000007254) #10	ENSNLEG00000019236	POU2AF2 (ENSNLEG00000007253) #11	ARHGAP20 (ENSNLEG00000007251) #12	FDX1 (ENSNLEG00000030050) #13	RDX (ENSNLEG00000007247) #14	ZC3H12C (ENSNLEG00000029829) #16	ENSNLEG00000031364	C11orf87 (ENSNLEG00000028259) #17	ENSNLEG00000007244	DDX10 (ENSNLEG00000007242) #18	EXPH5 (ENSNLEG00000007241) #20	POGLUT3 (ENSNLEG00000007238) #21	C11orf65 (ENSNLEG00000007234) #22	ATM (ENSNLEG00000007230) #23	NPAT (ENSNLEG00000007228) #24	ACAT1 (ENSNLEG00000007227) #26	CUL5 (ENSNLEG00000007226) #27	RAB39A (ENSNLEG00000028669) #28	ENSNLEG00000019235	SLC35F2 (ENSNLEG00000007222) #29	ENSNLEG00000030733	SLN (ENSNLEG00000034578)	ELMOD1 (ENSNLEG00000007218) #30	ALKBH8 (ENSNLEG00000007217) #31	CWF19L2 (ENSNLEG00000007213) #35	ENSNLEG00000034019	ENSNLEG00000027810	ENSNLEG00000007212 #34
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a.r #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627.a.a #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000164349
Cebidae	ANCESTRAL SPECIES		ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a.r #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627.a.a #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000164349
Cebidae_a	ANCESTRAL SPECIES	22	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a.r #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627.a.a #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000164349
Bolivian squirrel monkey	MODERN SPECIES	50	LAYN (ENSSBOG00000025374)	ENSSBOG00000035946	HOATZ (ENSSBOG00000028039) #7	BTG4 (ENSSBOG00000000915) #8	POU2AF1 (ENSSBOG00000021452) #9	POU2AF3 (ENSSBOG00000026595) #10	POU2AF2 (ENSSBOG00000009205) #11	ARHGAP20 (ENSSBOG00000019355) #12	ENSSBOG00000022685 #13	RDX (ENSSBOG00000031575) #14	ZC3H12C (ENSSBOG00000025582) #16	C11orf87 (ENSSBOG00000010527) #17	DDX10 (ENSSBOG00000022735) #18	EXPH5 (ENSSBOG00000028131) #20	POGLUT3 (ENSSBOG00000028643) #21	C11orf65 (ENSSBOG00000033968) #22	ATM (ENSSBOG00000030147) #23	ENSSBOG00000030945	NPAT (ENSSBOG00000021814) #24	ACAT1 (ENSSBOG00000029551) #26	CUL5 (ENSSBOG00000033575) #27	RAB39A (ENSSBOG00000018646) #28	SLC35F2 (ENSSBOG00000029721) #29	ELMOD1 (ENSSBOG00000031365) #30	ALKBH8 (ENSSBOG00000031504) #31	CWF19L2 (ENSSBOG00000033647) #35	GUCY1A2 (ENSSBOG00000020105) #34	AASDHPPT (ENSSBOG00000014423)	KBTBD3 (ENSSBOG00000024589)	MSANTD4 (ENSSBOG00000031639)	GRIA4 (ENSSBOG00000025256)
Capuchin	MODERN SPECIES	194										FDX1 (ENSCCAG00000024262) #13	RDX (ENSCCAG00000036737) #14	ZC3H12C (ENSCCAG00000022395) #16	DDX10 (ENSCCAG00000024209) #18	EXPH5 (ENSCCAG00000026428) #20	ENSCCAG00000002921 #21	C11orf65 (ENSCCAG00000036769) #22	ATM (ENSCCAG00000028598) #23	NPAT (ENSCCAG00000026452) #24	ACAT1 (ENSCCAG00000023713) #26	CUL5 (ENSCCAG00000026297) #27	RAB39A (ENSCCAG00000028849) #28	SLC35F2 (ENSCCAG00000021095) #29	ELMOD1 (ENSCCAG00000010863) #30	ALKBH8 (ENSCCAG00000036485) #31	ENSCCAG00000034828 #35	GUCY1A2 (ENSCCAG00000031034) #34
Marmoset	MODERN SPECIES	2	POU2AF2 (ENSCJAG00000010442) #11	ARHGAP20 (ENSCJAG00000010405) #12	ENSCJAG00000085488	FDX1 (ENSCJAG00000082157) #13	ENSCJAG00000085235	RDX (ENSCJAG00000010343) #14	ENSCJAG00000038562	ZC3H12C (ENSCJAG00000082470) #16	ENSCJAG00000042932	C11orf87 (ENSCJAG00000043178) #17	ENSCJAG00000083206	ENSCJAG00000061427	DDX10 (ENSCJAG00000010281) #18	EXPH5 (ENSCJAG00000042417) #20	POGLUT3 (ENSCJAG00000042526) #21	C11orf65 (ENSCJAG00000010238) #22	ATM (ENSCJAG00000010159) #23	NPAT (ENSCJAG00000010132) #24	ENSCJAG00000041111	CUL5 (ENSCJAG00000010059) #27	RAB39A (ENSCJAG00000010058) #28	SLC35F2 (ENSCJAG00000038166) #29	ENSCJAG00000076011	ELMOD1 (ENSCJAG00000009974) #30	ENSCJAG00000078009	ALKBH8 (ENSCJAG00000009957) #31	ENSCJAG00000034789	CWF19L2 (ENSCJAG00000009951) #35	ENSCJAG00000077514	GUCY1A2 (ENSCJAG00000009948) #34	ENSCJAG00000084129
Mas night monkey	MODERN SPECIES	525												C11orf87 (ENSANAG00000031136) #17	DDX10 (ENSANAG00000020864) #18	EXPH5 (ENSANAG00000019766) #20	POGLUT3 (ENSANAG00000022448) #21	C11orf65 (ENSANAG00000031891) #22	ATM (ENSANAG00000023573) #23	NPAT (ENSANAG00000024748) #24	ACAT1 (ENSANAG00000028971) #26	CUL5 (ENSANAG00000024872) #27	ENSANAG00000024678	RAB39A (ENSANAG00000032503) #28
Tarsier	MODERN SPECIES	3816															KDELC2 (ENSTSYG00000001384) #21	CUNH11orf65 (ENSTSYG00000001893) #22	ATM (ENSTSYG00000009678) #23	NPAT (ENSTSYG00000009647) #24	ENSTSYG00000004258 ##32	ACAT1 (ENSTSYG00000012639) #26	CUL5 (ENSTSYG00000009372) #27	ENSTSYG00000029273
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Lemuriformes_a	ANCESTRAL SPECIES	22	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00940000168617.e	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00390000003248.a.a.a.b	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Coquerels sifaka	MODERN SPECIES	760	ALG9 (ENSPCOG00000013221)	PPP2R1B (ENSPCOG00000022343)	SIK2 (ENSPCOG00000010314)	LAYN (ENSPCOG00000024796)	HOATZ (ENSPCOG00000015833) #7	BTG4 (ENSPCOG00000025062) #8	POU2AF1 (ENSPCOG00000015832) #9	POU2AF3 (ENSPCOG00000004372) #10	POU2AF2 (ENSPCOG00000023153) #11	ARHGAP20 (ENSPCOG00000018878) #12	FDX1 (ENSPCOG00000012522) #13	ZC3H12C (ENSPCOG00000024737) #16	DDX10 (ENSPCOG00000020289) #18	EXPH5 (ENSPCOG00000018196) #20	POGLUT3 (ENSPCOG00000020286) #21	C11orf65 (ENSPCOG00000016836) #22	ENSPCOG00000014064	ATM (ENSPCOG00000020514) #23	NPAT (ENSPCOG00000016278) #24	ACAT1 (ENSPCOG00000023465) #26	ENSPCOG00000028494	CUL5 (ENSPCOG00000025380) #27	RAB39A (ENSPCOG00000019017) #28	SLC35F2 (ENSPCOG00000008427) #29	ELMOD1 (ENSPCOG00000023055) #30	ALKBH8 (ENSPCOG00000022645) #31	CWF19L2 (ENSPCOG00000018032) #35	ENSPCOG00000015897	GUCY1A2 (ENSPCOG00000016375) #34	AASDHPPT (ENSPCOG00000014297)	KBTBD3 (ENSPCOG00000021176)
Greater bamboo lemur	MODERN SPECIES	321													DDX10 (ENSPSMG00000011533) #18	EXPH5 (ENSPSMG00000011488) #20	POGLUT3 (ENSPSMG00000011480) #21	C11orf65 (ENSPSMG00000011473) #22	ENSPSMG00000011468	ATM (ENSPSMG00000011431) #23	NPAT (ENSPSMG00000011327) #24	ACAT1 (ENSPSMG00000011279) #26	CUL5 (ENSPSMG00000011252) #27	RAB39A (ENSPSMG00000011192) #28	SLC35F2 (ENSPSMG00000011175) #29	ENSPSMG00000011144	ELMOD1 (ENSPSMG00000011131) #30	ALKBH8 (ENSPSMG00000011105) #31	CWF19L2 (ENSPSMG00000011079) #35	GUCY1A2 (ENSPSMG00000011041) #34
Mouse lemur	MODERN SPECIES	27	SIK2 (ENSMICG00000015724)	LAYN (ENSMICG00000015658)	HOATZ (ENSMICG00000032147) #7	BTG4 (ENSMICG00000001293) #8	POU2AF1 (ENSMICG00000034665) #9	POU2AF3 (ENSMICG00000032454) #10	POU2AF2 (ENSMICG00000028357) #11	ARHGAP20 (ENSMICG00000029239) #12	ENSMICG00000002989	FDX1 (ENSMICG00000007112) #13	RDX (ENSMICG00000011469) #14	ZC3H12C (ENSMICG00000011455) #16	DDX10 (ENSMICG00000035071) #18	EXPH5 (ENSMICG00000044911) #20	POGLUT3 (ENSMICG00000003463) #21	C11orf65 (ENSMICG00000003461) #22	ENSMICG00000001104	ATM (ENSMICG00000013655) #23	NPAT (ENSMICG00000000386) #24	ACAT1 (ENSMICG00000000380) #26	ENSMICG00000028194	CUL5 (ENSMICG00000000376) #27	RAB39A (ENSMICG00000045554) #28	ENSMICG00000038149	SLC35F2 (ENSMICG00000000245) #29	ELMOD1 (ENSMICG00000001050) #30	ALKBH8 (ENSMICG00000001044) #31	CWF19L2 (ENSMICG00000010853) #35	GUCY1A2 (ENSMICG00000004925) #34	ENSMICG00000035020	ENSMICG00000036566
Bushbaby	MODERN SPECIES	201	POU2AF1 (ENSOGAG00000012629) #9	ENSOGAG00000024081 #10	POU2AF2 (ENSOGAG00000012625) #11	ARHGAP20 (ENSOGAG00000015926) #12	ENSOGAG00000024799	ENSOGAG00000033257	FDX1 (ENSOGAG00000030160) #13	RDX (ENSOGAG00000013225) #14	ENSOGAG00000032801	ZC3H12C (ENSOGAG00000013223) #16	ENSOGAG00000034206	C11orf87 (ENSOGAG00000010609) #17	DDX10 (ENSOGAG00000010962) #18	EXPH5 (ENSOGAG00000024459) #20	POGLUT3 (ENSOGAG00000010948) #21	C11orf65 (ENSOGAG00000010944) #22	ATM (ENSOGAG00000017247) #23	NPAT (ENSOGAG00000017246) #24	ACAT1 (ENSOGAG00000017245) #26	CUL5 (ENSOGAG00000007198) #27
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Tree shrew	MODERN SPECIES	3402													DDX10 (ENSTBEG00000006321) #18	EXPH5 (ENSTBEG00000005282) #20	POGLUT3 (ENSTBEG00000004430) #21	C11orf65 (ENSTBEG00000003732) #22	ATM (ENSTBEG00000008719) #23	NPAT (ENSTBEG00000008227) #24	ACAT1 (ENSTBEG00000007233) #26	CUL5 (ENSTBEG00000006094) #27
Glires	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT00940000156445	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00390000008536	ENSGT00940000158563 #31	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000162428.b	ENSGT00940000159114
Rabbit	MODERN SPECIES		ENSOCUG00000017811	ENSOCUG00000039274	ENSOCUG00000030051	ARHGAP20 (ENSOCUG00000013948) #12	ENSOCUG00000031937	ENSOCUG00000017826 #13	ENSOCUG00000032740	RDX (ENSOCUG00000014267) #14	ZC3H12C (ENSOCUG00000005283) #16	ENSOCUG00000006972	C11orf87 (ENSOCUG00000001196) #17	DDX10 (ENSOCUG00000003843) #18	EXPH5 (ENSOCUG00000016757) #20	POGLUT3 (ENSOCUG00000014539) #21	ENSOCUG00000035350	C11orf65 (ENSOCUG00000000044) #22	ATM (ENSOCUG00000014663) #23	ACAT1 (ENSOCUG00000002882) #26	CUL5 (ENSOCUG00000010907) #27	RAB39A (ENSOCUG00000021112) #28	SLC35F2 (ENSOCUG00000011878) #29	ENSOCUG00000011876	ELMOD1 (ENSOCUG00000011869) #30	CWF19L2 (ENSOCUG00000025398) #35	ENSOCUG00000038405	GUCY1A2 (ENSOCUG00000004490) #34	ENSOCUG00000036599	ENSOCUG00000023190	AASDHPPT (ENSOCUG00000000231)	KBTBD3 (ENSOCUG00000000230)	MSANTD4 (ENSOCUG00000022457)
Pika	MODERN SPECIES	3769																ENSOPRG00000008130 #22
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Muroidea	ANCESTRAL SPECIES	29	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00950000182989.A
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00950000182989.A
Northern American deer mouse	MODERN SPECIES	20	Layn (ENSPEMG00000015633)	Hoatz (ENSPEMG00000013466) #7	Btg4 (ENSPEMG00000030483) #8	Gm32742 (ENSPEMG00000010480)	Pou2af1 (ENSPEMG00000030398) #9	Pou2af3 (ENSPEMG00000024931) #10	Pou2af2 (ENSPEMG00000000333) #11	Arhgap20 (ENSPEMG00000020012) #12	Fdx1 (ENSPEMG00000013678) #13	ENSPEMG00000011636 #14	Zc3h12c (ENSPEMG00000008502) #16	AI593442 (ENSPEMG00000007289) #17	Ddx10 (ENSPEMG00000017492) #18	Exph5 (ENSPEMG00000015667) #20	Poglut3 (ENSPEMG00000012786) #21	4930550C14Rik (ENSPEMG00000012072) #22	ENSPEMG00000013972 #23	Npat (ENSPEMG00000018601) #24	Acat1 (ENSPEMG00000014134) #26	Cul5 (ENSPEMG00000008829) #27	ENSPEMG00000025940	Rab39 (ENSPEMG00000030526) #28	Slc35f2 (ENSPEMG00000002299) #29	Sln (ENSPEMG00000030736)	Elmod1 (ENSPEMG00000009376) #30	Tnfaip8l3 (ENSPEMG00000027588)	Cyp19a1 (ENSPEMG00000020167)	Gldn (ENSPEMG00000020076)	Dmxl2 (ENSPEMG00000000722)	ENSPEMG00000015602	Idh3a (ENSPEMG00000012115)
Prairie vole	MODERN SPECIES	13	Layn (ENSMOCG00000010606)	Hoatz (ENSMOCG00000022010) #7	Btg4 (ENSMOCG00000001585) #8	Gm32742 (ENSMOCG00000012210)	Pou2af1 (ENSMOCG00000016520) #9	Pou2af3 (ENSMOCG00000017209) #10	Pou2af2 (ENSMOCG00000018556) #11	Arhgap20 (ENSMOCG00000022072) #12	Fdx1 (ENSMOCG00000020431) #13	Rdx (ENSMOCG00000022444) #14	Zc3h12c (ENSMOCG00000020090) #16	AI593442 (ENSMOCG00000022121) #17	Ddx10 (ENSMOCG00000009915) #18	Exph5 (ENSMOCG00000014944) #20	Poglut3 (ENSMOCG00000005032) #21	4930550C14Rik (ENSMOCG00000012412) #22	Atm (ENSMOCG00000020839) #23	Npat (ENSMOCG00000017269) #24	Acat1 (ENSMOCG00000014773) #26	Cul5 (ENSMOCG00000008916) #27	Rab39 (ENSMOCG00000015785) #28	Slc35f2 (ENSMOCG00000018231) #29	Sln (ENSMOCG00000006659)	Elmod1 (ENSMOCG00000014424) #30	Tnfaip8l3 (ENSMOCG00000009486)	Cyp19a1 (ENSMOCG00000007758)	Gldn (ENSMOCG00000019766)	Dmxl2 (ENSMOCG00000013445)	ENSMOCG00000013279	Cib2 (ENSMOCG00000016361)	Idh3a (ENSMOCG00000005720)
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00950000182989.A.k
Golden Hamster	MODERN SPECIES	635	Layn (ENSMAUG00000008603)	Hoatz (ENSMAUG00000011164) #7	Btg4 (ENSMAUG00000019040) #8	Gm32742 (ENSMAUG00000010291)	Pou2af1 (ENSMAUG00000011912) #9	Pou2af3 (ENSMAUG00000001055) #10	Pou2af2 (ENSMAUG00000020649) #11	Arhgap20 (ENSMAUG00000021629) #12	Fdx1 (ENSMAUG00000021874) #13	Rdx (ENSMAUG00000014149) #14	Zc3h12c (ENSMAUG00000020412) #16	AI593442 (ENSMAUG00000009477) #17	ENSMAUG00000009113	Exph5 (ENSMAUG00000006496) #20	Poglut3 (ENSMAUG00000007585) #21	4930550C14Rik (ENSMAUG00000021850) #22	Atm (ENSMAUG00000011714) #23	Npat (ENSMAUG00000011129) #24	ENSMAUG00000010771	Acat1 (ENSMAUG00000011317) #26	Cul5 (ENSMAUG00000010783) #27	Rab39 (ENSMAUG00000001151) #28	ENSMAUG00000010176	Slc35f2 (ENSMAUG00000009323) #29	Sln (ENSMAUG00000010169)	Elmod1 (ENSMAUG00000009403) #30	Tnfaip8l3 (ENSMAUG00000013426)	Cyp19a1 (ENSMAUG00000014665)	Gldn (ENSMAUG00000009445)	Dmxl2 (ENSMAUG00000008761)	Sh2d7 (ENSMAUG00000014940)
Chinese hamster chok1gshd	MODERN SPECIES	284	ENSCGRG00001019269 #7	Btg4 (ENSCGRG00001016420) #8	Gm32742 (ENSCGRG00001024988)	Pou2af1 (ENSCGRG00001016957) #9	Pou2af3 (ENSCGRG00001015209) #10	Pou2af2 (ENSCGRG00001022704) #11	Arhgap20 (ENSCGRG00001012851) #12	ENSCGRG00001023421	Fdx1 (ENSCGRG00001020345) #13	Rdx (ENSCGRG00001022782) #14	Zc3h12c (ENSCGRG00001013672) #16	AI593442 (ENSCGRG00001006838) #17	Ddx10 (ENSCGRG00001007099) #18	Exph5 (ENSCGRG00001023400) #20	Poglut3 (ENSCGRG00001022653) #21	4930550C14Rik (ENSCGRG00001024526) #22	Atm (ENSCGRG00001019797) #23	Npat (ENSCGRG00001012884) #24	Acat1 (ENSCGRG00001005942) #26	Cul5 (ENSCGRG00001024408) #27	Rab39 (ENSCGRG00001013530) #28	Slc35f2 (ENSCGRG00001007885) #29	Sln (ENSCGRG00001023383)	Elmod1 (ENSCGRG00001012240) #30	Tnfaip8l3 (ENSCGRG00001005171)	Cyp19a1 (ENSCGRG00001015094)	Gldn (ENSCGRG00001010595)	Dmxl2 (ENSCGRG00001007276)	Sh2d7 (ENSCGRG00001024760)	Cib2 (ENSCGRG00001020357)	ENSCGRG00001015727
Murinae	ANCESTRAL SPECIES	3	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Mus	ANCESTRAL SPECIES	4	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
Mouse	MODERN SPECIES	18	Layn (ENSMUSG00000060594)	Btg4 (ENSMUSG00000032056) #8	Hoatz (ENSMUSG00000032057) #7	Gm32742 (ENSMUSG00000110266)	Pou2af1 (ENSMUSG00000032053) #9	Pou2af3 (ENSMUSG00000079559) #10	Pou2af2 (ENSMUSG00000036027) #11	Arhgap20 (ENSMUSG00000053199) #12	Fdx1 (ENSMUSG00000032051) #13	Rdx (ENSMUSG00000032050) #14	Zc3h12c (ENSMUSG00000035164) #16	AI593442 (ENSMUSG00000078307) #17	Ddx10 (ENSMUSG00000053289) #18	Exph5 (ENSMUSG00000034584) #20	Poglut3 (ENSMUSG00000034487) #21	4930550C14Rik (ENSMUSG00000005131) #22	Atm (ENSMUSG00000034218) #23	Npat (ENSMUSG00000033054) #24	Acat1 (ENSMUSG00000032047) #26	Cul5 (ENSMUSG00000032030) #27	Rab39 (ENSMUSG00000055069) #28	Slc35f2 (ENSMUSG00000042195) #29	Sln (ENSMUSG00000042045)	Elmod1 (ENSMUSG00000041986) #30	Tnfaip8l3 (ENSMUSG00000074345)	Cyp19a1 (ENSMUSG00000032274)	Gldn (ENSMUSG00000046167)	Dmxl2 (ENSMUSG00000041268)	Sh2d7 (ENSMUSG00000046460)	Cib2 (ENSMUSG00000037493)	Idh3a (ENSMUSG00000032279)
Mus_C	ANCESTRAL SPECIES	8	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000160977	ENSGT00940000157327	ENSGT00940000175407
spretus	MODERN SPECIES	18	Layn (MGP_SPRETEiJ_G0033340)	Hoatz (MGP_SPRETEiJ_G0033341) #7	Btg4 (MGP_SPRETEiJ_G0033342) #8	Pou2af1 (MGP_SPRETEiJ_G0033343) #9	Pou2af3 (MGP_SPRETEiJ_G0033344) #10	Pou2af2 (MGP_SPRETEiJ_G0033345) #11	MGP_SPRETEiJ_G0033346	Arhgap20 (MGP_SPRETEiJ_G0033347) #12	Fdx1 (MGP_SPRETEiJ_G0033348) #13	Rdx (MGP_SPRETEiJ_G0033349) #14	Zc3h12c (MGP_SPRETEiJ_G0033350) #16	AI593442 (MGP_SPRETEiJ_G0033351) #17	Ddx10 (MGP_SPRETEiJ_G0033352) #18	Exph5 (MGP_SPRETEiJ_G0033353) #20	Poglut3 (MGP_SPRETEiJ_G0033354) #21	4930550C14Rik (MGP_SPRETEiJ_G0033355) #22	MGP_SPRETEiJ_G0033356 #23	Npat (MGP_SPRETEiJ_G0033357) #24	Acat1 (MGP_SPRETEiJ_G0033358) #26	Cul5 (MGP_SPRETEiJ_G0033359) #27	Rab39 (MGP_SPRETEiJ_G0033360) #28	Slc35f2 (MGP_SPRETEiJ_G0033361) #29	Sln (MGP_SPRETEiJ_G0033362)	Elmod1 (MGP_SPRETEiJ_G0033363) #30	Tnfaip8l3 (MGP_SPRETEiJ_G0033364)	Cyp19a1 (MGP_SPRETEiJ_G0033365)	Gldn (MGP_SPRETEiJ_G0033366)	Dmxl2 (MGP_SPRETEiJ_G0033367)	MGP_SPRETEiJ_G0033368	Cib2 (MGP_SPRETEiJ_G0033369)	Idh3a (MGP_SPRETEiJ_G0033370)
Steppe mouse	MODERN SPECIES	3294				Fdx1 (ENSMSIG00000023526) #13	ENSMSIG00000023562	Rdx (ENSMSIG00000023566) #14	Zc3h12c (ENSMSIG00000023596) #16	ENSMSIG00000002067	AI593442 (ENSMSIG00000002076) #17	ENSMSIG00000002094	Ddx10 (ENSMSIG00000002113) #18	ENSMSIG00000002160	ENSMSIG00000002169	Exph5 (ENSMSIG00000002225) #20	Poglut3 (ENSMSIG00000002258) #21	4930550C14Rik (ENSMSIG00000002342) #22	Atm (ENSMSIG00000002482) #23	Npat (ENSMSIG00000003045) #24	ENSMSIG00000003120 #27	Rab39 (ENSMSIG00000003361) #28	Slc35f2 (ENSMSIG00000003375) #29	Sln (ENSMSIG00000003398)	Elmod1 (ENSMSIG00000003422) #30	Tnfaip8l3 (ENSMSIG00000003481)	Cyp19a1 (ENSMSIG00000003500)	ENSMSIG00000003540	Gldn (ENSMSIG00000003561)	Dmxl2 (ENSMSIG00000003612)	ENSMSIG00000003851	Cib2 (ENSMSIG00000003889)	ENSMSIG00000003928
Ryukyu mouse	MODERN SPECIES	18	Sik2 (MGP_CAROLIEiJ_G0032200)	Layn (MGP_CAROLIEiJ_G0032201)	Hoatz (MGP_CAROLIEiJ_G0032202) #7	Btg4 (MGP_CAROLIEiJ_G0032203) #8	Pou2af1 (MGP_CAROLIEiJ_G0032204) #9	Pou2af3 (MGP_CAROLIEiJ_G0032205) #10	Pou2af2 (MGP_CAROLIEiJ_G0032206) #11	Arhgap20 (MGP_CAROLIEiJ_G0032207) #12	Fdx1 (MGP_CAROLIEiJ_G0032208) #13	Rdx (MGP_CAROLIEiJ_G0032209) #14	Zc3h12c (MGP_CAROLIEiJ_G0032210) #16	AI593442 (MGP_CAROLIEiJ_G0032211) #17	Ddx10 (MGP_CAROLIEiJ_G0032212) #18	Exph5 (MGP_CAROLIEiJ_G0032213) #20	Poglut3 (MGP_CAROLIEiJ_G0032214) #21	4930550C14Rik (MGP_CAROLIEiJ_G0032215) #22	Atm (MGP_CAROLIEiJ_G0032216) #23	Npat (MGP_CAROLIEiJ_G0032217) #24	Acat1 (MGP_CAROLIEiJ_G0032218) #26	Cul5 (MGP_CAROLIEiJ_G0032219) #27	Rab39 (MGP_CAROLIEiJ_G0032220) #28	Slc35f2 (MGP_CAROLIEiJ_G0032221) #29	Sln (MGP_CAROLIEiJ_G0032222)	Elmod1 (MGP_CAROLIEiJ_G0032223) #30	Tnfaip8l3 (MGP_CAROLIEiJ_G0032224)	Cyp19a1 (MGP_CAROLIEiJ_G0032225)	Gldn (MGP_CAROLIEiJ_G0032226)	Dmxl2 (MGP_CAROLIEiJ_G0032227)	MGP_CAROLIEiJ_G0032228	Cib2 (MGP_CAROLIEiJ_G0032229)	Idh3a (MGP_CAROLIEiJ_G0032230)
Shrew mouse	MODERN SPECIES	1	Sik2 (MGP_PahariEiJ_G0015068)	Layn (MGP_PahariEiJ_G0015069)	Hoatz (MGP_PahariEiJ_G0015070) #7	Btg4 (MGP_PahariEiJ_G0015071) #8	Pou2af1 (MGP_PahariEiJ_G0015072) #9	Pou2af3 (MGP_PahariEiJ_G0015073) #10	MGP_PahariEiJ_G0015074 #11	Arhgap20 (MGP_PahariEiJ_G0015075) #12	Fdx1 (MGP_PahariEiJ_G0015076) #13	Rdx (MGP_PahariEiJ_G0015077) #14	Zc3h12c (MGP_PahariEiJ_G0015078) #16	AI593442 (MGP_PahariEiJ_G0015079) #17	Ddx10 (MGP_PahariEiJ_G0015080) #18	Exph5 (MGP_PahariEiJ_G0015081) #20	Poglut3 (MGP_PahariEiJ_G0015082) #21	4930550C14Rik (MGP_PahariEiJ_G0015083) #22	Atm (MGP_PahariEiJ_G0015084) #23	Npat (MGP_PahariEiJ_G0015085) #24	Acat1 (MGP_PahariEiJ_G0015086) #26	Cul5 (MGP_PahariEiJ_G0015087) #27	Rab39 (MGP_PahariEiJ_G0015088) #28	Slc35f2 (MGP_PahariEiJ_G0015089) #29	Sln (MGP_PahariEiJ_G0015090)	Elmod1 (MGP_PahariEiJ_G0015091) #30	Tnfaip8l3 (MGP_PahariEiJ_G0015092)	Cyp19a1 (MGP_PahariEiJ_G0015093)	Gldn (MGP_PahariEiJ_G0015094)	Dmxl2 (MGP_PahariEiJ_G0015095)	MGP_PahariEiJ_G0015096	Cib2 (MGP_PahariEiJ_G0015097)	Idh3a (MGP_PahariEiJ_G0015098)
Rat	MODERN SPECIES	18	Hoatz (ENSRNOG00000043383) #7	Btg4 (ENSRNOG00000011277) #8	RGD1562811 (ENSRNOG00000067468)	Pou2af1 (ENSRNOG00000011500) #9	Pou2af3 (ENSRNOG00000042165) #10	Pou2af2 (ENSRNOG00000012022) #11	Arhgap20 (ENSRNOG00000025624) #12	Fdx1 (ENSRNOG00000012123) #13	Rdx (ENSRNOG00000012237) #14	Zc3h12c (ENSRNOG00000012470) #16	LOC100125362 (ENSRNOG00000025463) #17	ENSRNOG00000062987	Ddx10 (ENSRNOG00000012500) #18	Exph5 (ENSRNOG00000025115) #20	Poglut3 (ENSRNOG00000007177) #21	C8h11orf65 (ENSRNOG00000007266) #22	Atm (ENSRNOG00000029773) #23	Npat (ENSRNOG00000024934) #24	Acat1 (ENSRNOG00000007862) #26	Cul5 (ENSRNOG00000008039) #27	Rab39a (ENSRNOG00000063146) #28	Slc35f2 (ENSRNOG00000009014) #29	Sln (ENSRNOG00000009047)	Elmod1 (ENSRNOG00000009054) #30	Tnfaip8l3 (ENSRNOG00000024230)	Cyp19a1 (ENSRNOG00000000196)	Gldn (ENSRNOG00000024082)	Dmxl2 (ENSRNOG00000009170)	ENSRNOG00000064519	Sh2d7 (ENSRNOG00000023870)	Idh3a (ENSRNOG00000010277)
Upper Galilee mountains blind mole rat	MODERN SPECIES	670												Ddx10 (ENSNGAG00000010526) #18	ENSNGAG00000006714	Exph5 (ENSNGAG00000016578) #20	Poglut3 (ENSNGAG00000005388) #21	4930550C14Rik (ENSNGAG00000000140) #22	ENSNGAG00000010709	Atm (ENSNGAG00000012065) #23	Npat (ENSNGAG00000013282) #24	Acat1 (ENSNGAG00000021411) #26	Cul5 (ENSNGAG00000014111) #27	ENSNGAG00000011008	Rab39 (ENSNGAG00000010480) #28	Slc35f2 (ENSNGAG00000009488) #29	ENSNGAG00000003234	Elmod1 (ENSNGAG00000001481) #30	Alkbh8 (ENSNGAG00000017423) #31	ENSNGAG00000015354 #35	Gucy1a2 (ENSNGAG00000004842) #34	Aasdhppt (ENSNGAG00000001163)	Kbtbd3 (ENSNGAG00000016797)
Lesser Egyptian jerboa	MODERN SPECIES	49	ENSJJAG00000019895 #35	ENSJJAG00000017068	Alkbh8 (ENSJJAG00000021066) #31	Elmod1 (ENSJJAG00000018776) #30	Sln (ENSJJAG00000000991)	ENSJJAG00000014806 #29	Rab39 (ENSJJAG00000022717) #28	Cul5 (ENSJJAG00000009942) #27	ENSJJAG00000018798	Acat1 (ENSJJAG00000010565) #26	ENSJJAG00000020466	Npat (ENSJJAG00000019030) #24	Atm (ENSJJAG00000022280) #23	Exph5 (ENSJJAG00000021356) #20	Poglut3 (ENSJJAG00000005365) #21	4930550C14Rik (ENSJJAG00000015326) #22
Kangaroo rat	MODERN SPECIES	329	Alg9 (ENSDORG00000004027)	Ppp2r1b (ENSDORG00000009030)	Sik2 (ENSDORG00000009027)	Layn (ENSDORG00000023283)	Hoatz (ENSDORG00000009023) #7	Pou2af1 (ENSDORG00000016676) #9	Pou2af3 (ENSDORG00000023665) #10	Pou2af2 (ENSDORG00000011410) #11	Arhgap20 (ENSDORG00000027581) #12	Fdx1 (ENSDORG00000027025) #13	Rdx (ENSDORG00000009135) #14	Zc3h12c (ENSDORG00000009134) #16	Ddx10 (ENSDORG00000014459) #18	Exph5 (ENSDORG00000015514) #20	Poglut3 (ENSDORG00000005132) #21	4930550C14Rik (ENSDORG00000005437) #22	Atm (ENSDORG00000013688) #23	Npat (ENSDORG00000013685) #24	Acat1 (ENSDORG00000013681) #26	Cul5 (ENSDORG00000008149) #27	Rab39 (ENSDORG00000026121) #28	Slc35f2 (ENSDORG00000016340) #29	Sln (ENSDORG00000026414)	Elmod1 (ENSDORG00000008597) #30	Alkbh8 (ENSDORG00000008596) #31	ENSDORG00000008595 #35	Gucy1a2 (ENSDORG00000007568) #34	Aasdhppt (ENSDORG00000012684)	Kbtbd3 (ENSDORG00000012680)	Msantd4 (ENSDORG00000023419)	ENSDORG00000023554
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648.i #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Marmotini	ANCESTRAL SPECIES	20	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648.i #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Marmotini_b	ANCESTRAL SPECIES	122													ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648.i #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT01100000263709	ENSGT00940000159782 #30	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Squirrel	MODERN SPECIES	151													DDX10 (ENSSTOG00000005213) #18	EXPH5 (ENSSTOG00000004543) #20	POGLUT3 (ENSSTOG00000022975) #21	C11orf65 (ENSSTOG00000004513) #22	ATM (ENSSTOG00000004418) #23	NPAT (ENSSTOG00000004382) #24	ACAT1 (ENSSTOG00000004363) #26	CUL5 (ENSSTOG00000014157) #27	RAB39A (ENSSTOG00000003178) #28	SLC35F2 (ENSSTOG00000011321) #29	ENSSTOG00000001241	ELMOD1 (ENSSTOG00000001237) #30	ALKBH8 (ENSSTOG00000024939) #31	ENSSTOG00000033115 #35	ENSSTOG00000027350	GUCY1A2 (ENSSTOG00000013157) #34	AASDHPPT (ENSSTOG00000000268)	KBTBD3 (ENSSTOG00000001079)	MSANTD4 (ENSSTOG00000027044)
Arctic ground squirrel	MODERN SPECIES	207													DDX10 (ENSUPAG00010008664) #18	EXPH5 (ENSUPAG00010008610) #20	POGLUT3 (ENSUPAG00010008579) #21	C11orf65 (ENSUPAG00010008566) #22	ATM (ENSUPAG00010008165) #23	NPAT (ENSUPAG00010008128) #24	ACAT1 (ENSUPAG00010008119) #26	CUL5 (ENSUPAG00010008089) #27	ENSUPAG00010008079 #28	SLC35F2 (ENSUPAG00010008062) #29	ENSUPAG00010008058	ELMOD1 (ENSUPAG00010008041) #30	ALKBH8 (ENSUPAG00010007970) #31	CWF19L2 (ENSUPAG00010007890) #35	GUCY1A2 (ENSUPAG00010007868) #34	AASDHPPT (ENSUPAG00010007855)	KBTBD3 (ENSUPAG00010007846)	MSANTD4 (ENSUPAG00010007838)	GRIA4 (ENSUPAG00010007709)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005014599	ARHGAP20 (ENSSVLG00005014289) #12	FDX1 (ENSSVLG00005014193) #13	RDX (ENSSVLG00005014006) #14	ZC3H12C (ENSSVLG00005013570) #16	ENSSVLG00005013356	ENSSVLG00005013311	C11orf87 (ENSSVLG00005013245) #17	ENSSVLG00005013189	ENSSVLG00005013129	ENSSVLG00005013030	DDX10 (ENSSVLG00005012943) #18	EXPH5 (ENSSVLG00005012839) #20	POGLUT3 (ENSSVLG00005012714) #21	ENSSVLG00005012690	C11orf65 (ENSSVLG00005012582) #22	ENSSVLG00005012524	ENSSVLG00005021707	ATM (ENSSVLG00005021633) #23	NPAT (ENSSVLG00005021558) #24	ENSSVLG00005021105 #26	ENSSVLG00005021019 #27	ENSSVLG00005020943 #27	RAB39A (ENSSVLG00005020904) #28	SLC35F2 (ENSSVLG00005020721) #29	ENSSVLG00005020700	ELMOD1 (ENSSVLG00005020424) #30	ENSSVLG00005020267 #31	CWF19L2 (ENSSVLG00005020205) #35	GUCY1A2 (ENSSVLG00005020104) #34	ENSSVLG00005020058
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Hystricomorpha_b	ANCESTRAL SPECIES	23	ENSGT00390000001844.a.b	ENSGT00390000002677 #7	ENSGT00950000182952.A.a #8	ENSGT00390000003661	ENSGT00390000017499 #9	ENSGT00420000030454 #10	ENSGT00390000000586 #11	ENSGT00940000154633 #12	ENSGT00940000156916 #13	ENSGT01090000260082.d.a.b #14	ENSGT00940000158397 #16	ENSGT00390000012905 #17	ENSGT00550000074980 #18	ENSGT00390000011087 #20	ENSGT00940000159028 #21	ENSGT00510000048394 #22	ENSGT00670000098061 #23	ENSGT00390000012388 #24	ENSGT01030000234626.E #26	ENSGT00940000156648 #27	ENSGT00940000159933 #28	ENSGT00390000015655.a #29	ENSGT00940000159782 #30	ENSGT00940000168471	ENSGT00940000158563 #31	ENSGT00940000155627 #35	ENSGT00940000157765 #34	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b
Long-tailed chinchilla	MODERN SPECIES	119	HOATZ (ENSCLAG00000013175) #7	ENSCLAG00000014472	BTG4 (ENSCLAG00000013983) #8	POU2AF1 (ENSCLAG00000015586) #9	POU2AF3 (ENSCLAG00000012877) #10	ENSCLAG00000015506 #11	ARHGAP20 (ENSCLAG00000012051) #12	ENSCLAG00000015869	FDX1 (ENSCLAG00000013409) #13	RDX (ENSCLAG00000013404) #14	ZC3H12C (ENSCLAG00000012577) #16	C11orf87 (ENSCLAG00000015145) #17	DDX10 (ENSCLAG00000013463) #18	EXPH5 (ENSCLAG00000014388) #20	POGLUT3 (ENSCLAG00000013476) #21	C11orf65 (ENSCLAG00000011009) #22	ATM (ENSCLAG00000011868) #23	NPAT (ENSCLAG00000014595) #24	ACAT1 (ENSCLAG00000013807) #26	CUL5 (ENSCLAG00000012699) #27	RAB39A (ENSCLAG00000013833) #28	SLC35F2 (ENSCLAG00000016324) #29	ENSCLAG00000011651	ELMOD1 (ENSCLAG00000011927) #30	ENSCLAG00000011087	ENSCLAG00000015715	CWF19L2 (ENSCLAG00000013844) #35	GUCY1A2 (ENSCLAG00000017060) #34	AASDHPPT (ENSCLAG00000015434)	KBTBD3 (ENSCLAG00000014468)	MSANTD4 (ENSCLAG00000016121)
Degu	MODERN SPECIES	53	POU2AF2 (ENSODEG00000011866) #11	ENSODEG00000019857	ENSODEG00000011838	ENSODEG00000019923	ENSODEG00000011527	ENSODEG00000010847	ARHGAP20 (ENSODEG00000011570) #12	FDX1 (ENSODEG00000010396) #13	RDX (ENSODEG00000011001) #14	ZC3H12C (ENSODEG00000011026) #16	C11orf87 (ENSODEG00000019863) #17	ENSODEG00000011294	ENSODEG00000012589	EXPH5 (ENSODEG00000012829) #20	POGLUT3 (ENSODEG00000010261) #21	C11orf65 (ENSODEG00000010746) #22	ENSODEG00000011472	ATM (ENSODEG00000015667) #23	NPAT (ENSODEG00000011867) #24	ACAT1 (ENSODEG00000011303) #26	CUL5 (ENSODEG00000011295) #27	RAB39A (ENSODEG00000013106) #28	ENSODEG00000012285	SLC35F2 (ENSODEG00000012070) #29	ELMOD1 (ENSODEG00000015056) #30	ENSODEG00000020136	ALKBH8 (ENSODEG00000011567) #31	ENSODEG00000013543 #35	ENSODEG00000012492 #34	ENSODEG00000011994	KBTBD3 (ENSODEG00000012092)
Guinea pig	MODERN SPECIES	136										FDX1 (ENSCPOG00000033006) #13	RDX (ENSCPOG00000003401) #14	ZC3H12C (ENSCPOG00000032962) #16	DDX10 (ENSCPOG00000000865) #18	EXPH5 (ENSCPOG00000033722) #20	POGLUT3 (ENSCPOG00000005942) #21	C11orf65 (ENSCPOG00000007853) #22	ATM (ENSCPOG00000010997) #23	NPAT (ENSCPOG00000010522) #24	ACAT1 (ENSCPOG00000015048) #26	CUL5 (ENSCPOG00000011436) #27	RAB39A (ENSCPOG00000040219) #28	SLC35F2 (ENSCPOG00000035208) #29	ENSCPOG00000033544	ELMOD1 (ENSCPOG00000007697) #30	ENSCPOG00000036448	ENSCPOG00000027134