Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Primates ANCESTRAL SPECIES 13 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Haplorrhini ANCESTRAL SPECIES 10 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Simiiformes ANCESTRAL SPECIES 15 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099.a ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Catarrhini ANCESTRAL SPECIES 16 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099.a ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00940000162422.d ENSGT00940000155099.a ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135.g #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00950000182827.A.i.b ##19 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000162422.d ENSGT00940000155099.a ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135.g #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00950000182827.A.i.b ##19 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.jb #34 Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135.g #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000165163 #12 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00950000182827.A.i.b ##19 ENSGT00390000001859 #20 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.jb #34 Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00940000162304 ENSGT00730000111135.g #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000165163 #12 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00950000182827.A.i.b ##19 ENSGT00950000182827.A.j #19 ENSGT00390000001859 #20 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.jb #34 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000162304 ENSGT00730000111135.g #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000165163 #12 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00950000182827.A.i.b ##19 ENSGT00950000182827.A.j #19 ENSGT00390000001859 #20 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.jb #34 Drill MODERN SPECIES 1072 ENSMLEG00000042096 #7 OLA1 (ENSMLEG00000040175) #8 CIR1 (ENSMLEG00000009014) #9 SCRN3 (ENSMLEG00000043626) #10 GPR155 (ENSMLEG00000027961) #11 ENSMLEG00000029654 #12 WIPF1 (ENSMLEG00000001484) #13 CHRNA1 (ENSMLEG00000043089) #14 ENSMLEG00000000615 #15 CHN1 (ENSMLEG00000032406) #16 ATF2 (ENSMLEG00000035167) #17 ATP5MC3 (ENSMLEG00000043816) #18 ENSMLEG00000001270 #19 LNPK (ENSMLEG00000033659) #20 EVX2 (ENSMLEG00000035528) #21 HOXD13 (ENSMLEG00000031532) #22 HOXD12 (ENSMLEG00000032533) #23 ENSMLEG00000030792 #24 HOXD10 (ENSMLEG00000044067) #25 HOXD9 (ENSMLEG00000025695) #26 ENSMLEG00000042507 #27 HOXD4 (ENSMLEG00000024188) #28 HOXD3 (ENSMLEG00000037278) #29 HOXD1 (ENSMLEG00000035890) #30 MTX2 (ENSMLEG00000002029) #31 NFE2L2 (ENSMLEG00000042705) #32 AGPS (ENSMLEG00000033858) #33 TTC30B (ENSMLEG00000027894) #34 TTC30A (ENSMLEG00000027775) #35 ENSMLEG00000039892 #36 ENSMLEG00000035955 #37 Sooty mangabey MODERN SPECIES 570 SP9 (ENSCATG00000031475) CIR1 (ENSCATG00000034814) #9 SCRN3 (ENSCATG00000032178) #10 GPR155 (ENSCATG00000033300) #11 WIPF1 (ENSCATG00000022645) #13 CHRNA1 (ENSCATG00000030584) #14 CHN1 (ENSCATG00000036640) #16 ENSCATG00000035911 #15 ATF2 (ENSCATG00000005694) #17 ATP5MC3 (ENSCATG00000035329) #18 ENSCATG00000037951 ##19 ENSCATG00000041432 LNPK (ENSCATG00000039052) #20 ENSCATG00000005782 EVX2 (ENSCATG00000038250) #21 HOXD13 (ENSCATG00000031889) #22 HOXD12 (ENSCATG00000032043) #23 HOXD10 (ENSCATG00000032256) #25 HOXD11 (ENSCATG00000031157) #24 HOXD9 (ENSCATG00000037190) #26 HOXD8 (ENSCATG00000032148) #27 HOXD4 (ENSCATG00000041719) #28 HOXD3 (ENSCATG00000029355) #29 ENSCATG00000032250 HOXD1 (ENSCATG00000032397) #30 MTX2 (ENSCATG00000039959) #31 ENSCATG00000022731 HNRNPA3 (ENSCATG00000032162) ENSCATG00000001855 NFE2L2 (ENSCATG00000036834) #32 AGPS (ENSCATG00000038387) #33 Olive baboon DUPLICATION Olive baboon MODERN SPECIES 1 ENSPANG00000037160 OLA1 (ENSPANG00000020854) #8 ENSPANG00000035758 #7 SP9 (ENSPANG00000051025) CIR1 (ENSPANG00000033102) #9 SCRN3 (ENSPANG00000001316) #10 GPR155 (ENSPANG00000006559) #11 WIPF1 (ENSPANG00000019541) #13 CHRNA1 (ENSPANG00000007790) #14 CHN1 (ENSPANG00000008236) #16 ENSPANG00000005473 #15 ATF2 (ENSPANG00000004806) #17 ATP5MC3 (ENSPANG00000031591) #18 LNPK (ENSPANG00000011787) #20 ENSPANG00000039545 #21 ENSPANG00000044695 #22 ENSPANG00000044332 #23 HOXD11 (ENSPANG00000049530) #24 HOXD10 (ENSPANG00000050198) #25 HOXD9 (ENSPANG00000001061) #26 HOXD8 (ENSPANG00000049199) #27 HOXD4 (ENSPANG00000000542) #28 HOXD3 (ENSPANG00000000543) #29 HOXD1 (ENSPANG00000009593) #30 MTX2 (ENSPANG00000013333) #31 ENSPANG00000045287 ENSPANG00000018337 NFE2L2 (ENSPANG00000039361) #32 AGPS (ENSPANG00000004764) #33 TTC30B (ENSPANG00000046724) #34 TTC30A (ENSPANG00000041839) #35 Olive baboon MODERN SPECIES 269 ENSPANG00000050673 #21 ENSPANG00000012770 #22 ENSPANG00000046111 #23 Macaca ANCESTRAL SPECIES 15 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135.g #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000165163 #12 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00390000018390.jc.n #15 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00950000182827.A.i.b ##19 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.jb #34 Macaca_a ANCESTRAL SPECIES 17 ENSGT00940000155099.a ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135.g #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000166143.A.a.b.b.b.b.a.b.b ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00950000182827.A.j #19 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000170471.B.a.a.a ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 Rhesus MODERN SPECIES 3 SP3 (ENSMMUG00000021818) ENSMMUG00000060201 OLA1 (ENSMMUG00000007092) #8 SP9 (ENSMMUG00000023005) CIR1 (ENSMMUG00000023006) #9 SCRN3 (ENSMMUG00000023009) #10 GPR155 (ENSMMUG00000021012) #11 ENSMMUG00000053004 WIPF1 (ENSMMUG00000009593) #13 CHRNA1 (ENSMMUG00000021796) #14 CHN1 (ENSMMUG00000021797) #16 ATF2 (ENSMMUG00000003947) #17 ATP5MC3 (ENSMMUG00000003954) #18 LNPK (ENSMMUG00000023498) #20 EVX2 (ENSMMUG00000061506) #21 HOXD13 (ENSMMUG00000055831) #22 HOXD12 (ENSMMUG00000023501) #23 HOXD11 (ENSMMUG00000047915) #24 HOXD10 (ENSMMUG00000046368) #25 HOXD9 (ENSMMUG00000032599) #26 HOXD8 (ENSMMUG00000023504) #27 HOXD4 (ENSMMUG00000060947) #28 HOXD3 (ENSMMUG00000051761) #29 ENSMMUG00000052177 HOXD1 (ENSMMUG00000065344) #30 MTX2 (ENSMMUG00000010185) #31 ENSMMUG00000031367 ENSMMUG00000054983 ENSMMUG00000062299 HNRNPA3 (ENSMMUG00000001858) NFE2L2 (ENSMMUG00000001861) #32 Crab-eating macaque MODERN SPECIES 3 OLA1 (ENSMFAG00000044124) #8 SP9 (ENSMFAG00000035384) GPR155 (ENSMFAG00000035341) #11 SCRN3 (ENSMFAG00000042925) #10 ENSMFAG00000056942 ENSMFAG00000039499 #12 ENSMFAG00000060672 WIPF1 (ENSMFAG00000034165) #13 CHRNA1 (ENSMFAG00000042992) #14 CHN1 (ENSMFAG00000002404) #16 ATF2 (ENSMFAG00000002278) #17 ATP5MC3 (ENSMFAG00000056189) #18 ENSMFAG00000002936 #19 LNPK (ENSMFAG00000002105) #20 ENSMFAG00000053875 HOXD13 (ENSMFAG00000033237) #22 HOXD12 (ENSMFAG00000051547) #23 ENSMFAG00000043724 #24 HOXD10 (ENSMFAG00000031117) #25 HOXD9 (ENSMFAG00000000099) #26 HOXD8 (ENSMFAG00000065214) #27 HOXD4 (ENSMFAG00000052240) #28 HOXD3 (ENSMFAG00000034065) #29 ENSMFAG00000047422 HOXD1 (ENSMFAG00000046035) #30 MTX2 (ENSMFAG00000026822) #31 ENSMFAG00000065500 ENSMFAG00000058081 HNRNPA3 (ENSMFAG00000000823) NFE2L2 (ENSMFAG00000041108) #32 AGPS (ENSMFAG00000038904) #33 Pig-tailed macaque MODERN SPECIES 585 SP9 (ENSMNEG00000034757) CIR1 (ENSMNEG00000045151) #9 SCRN3 (ENSMNEG00000035295) #10 GPR155 (ENSMNEG00000028550) #11 ENSMNEG00000031252 #12 WIPF1 (ENSMNEG00000045560) #13 CHRNA1 (ENSMNEG00000043912) #14 ENSMNEG00000009103 #15 CHN1 (ENSMNEG00000033120) #16 ATF2 (ENSMNEG00000037988) #17 ATP5MC3 (ENSMNEG00000029106) #18 ENSMNEG00000035184 ##19 LNPK (ENSMNEG00000028702) #20 ENSMNEG00000024050 EVX2 (ENSMNEG00000028323) #21 HOXD13 (ENSMNEG00000027142) #22 HOXD12 (ENSMNEG00000002891) #23 HOXD11 (ENSMNEG00000029127) #24 HOXD10 (ENSMNEG00000033923) #25 HOXD9 (ENSMNEG00000044938) #26 HOXD8 (ENSMNEG00000028133) #27 HOXD4 (ENSMNEG00000030845) #28 HOXD3 (ENSMNEG00000040202) #29 ENSMNEG00000018849 HOXD1 (ENSMNEG00000010514) #30 MTX2 (ENSMNEG00000032881) #31 ENSMNEG00000026533 ENSMNEG00000034936 NFE2L2 (ENSMNEG00000028208) #32 AGPS (ENSMNEG00000043672) #33 TTC30B (ENSMNEG00000011632) #34 Vervet Monkey MODERN SPECIES 1 ENSCSAG00000014706 ENSCSAG00000014701 CDCA7 (ENSCSAG00000014699) SP3 (ENSCSAG00000014689) OLA1 (ENSCSAG00000014670) #8 SP9 (ENSCSAG00000014648) CIR1 (ENSCSAG00000014627) #9 SCRN3 (ENSCSAG00000014584) #10 GPR155 (ENSCSAG00000014572) #11 WIPF1 (ENSCSAG00000014556) #13 CHRNA1 (ENSCSAG00000014545) #14 CHN1 (ENSCSAG00000014539) #16 ATF2 (ENSCSAG00000014523) #17 LNPK (ENSCSAG00000014506) #20 EVX2 (ENSCSAG00000014486) #21 HOXD13 (ENSCSAG00000014475) #22 HOXD12 (ENSCSAG00000014464) #23 HOXD11 (ENSCSAG00000014457) #24 HOXD10 (ENSCSAG00000014448) #25 HOXD9 (ENSCSAG00000014441) #26 HOXD8 (ENSCSAG00000014437) #27 HOXD4 (ENSCSAG00000014429) #28 HOXD3 (ENSCSAG00000014422) #29 HOXD1 (ENSCSAG00000014419) #30 MTX2 (ENSCSAG00000014412) #31 ENSCSAG00000014399 NFE2L2 (ENSCSAG00000014353) #32 AGPS (ENSCSAG00000014345) #33 TTC30A (ENSCSAG00000018651) #35 PDE11A (ENSCSAG00000014313) ENSCSAG00000014240 Rhinopithecus ANCESTRAL SPECIES 148 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00950000182827.A.i.b ##19 ENSGT00390000001859.c #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00940000154301.`b.a ENSGT00960000186717.a ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 Black snub-nosed monkey MODERN SPECIES 241 ATF2 (ENSRBIG00000041657) #17 ATP5MC3 (ENSRBIG00000040343) #18 ENSRBIG00000038159 ##19 LNPK (ENSRBIG00000038235) #20 HOXD13 (ENSRBIG00000033719) #22 ENSRBIG00000035253 #24 HOXD12 (ENSRBIG00000040792) #23 HOXD10 (ENSRBIG00000030470) #25 HOXD9 (ENSRBIG00000035340) #26 HOXD8 (ENSRBIG00000036417) #27 HOXD4 (ENSRBIG00000027637) #28 HOXD3 (ENSRBIG00000044829) #29 HOXD1 (ENSRBIG00000031297) #30 ENSRBIG00000032024 ENSRBIG00000042767 MTX2 (ENSRBIG00000043097) #31 ENSRBIG00000012615 NFE2L2 (ENSRBIG00000042825) #32 AGPS (ENSRBIG00000039582) #33 TTC30A (ENSRBIG00000041155) #35 Golden snub-nosed monkey MODERN SPECIES 722 ENSRROG00000041768 #20 ENSRROG00000044546 EVX2 (ENSRROG00000044705) #21 HOXD13 (ENSRROG00000040419) #22 HOXD12 (ENSRROG00000043268) #23 ENSRROG00000043226 #24 HOXD9 (ENSRROG00000032216) #26 HOXD10 (ENSRROG00000036162) #25 ENSRROG00000024611 #27 HOXD4 (ENSRROG00000026646) #28 HOXD3 (ENSRROG00000044509) #29 HOXD1 (ENSRROG00000035364) #30 ENSRROG00000038369 ENSRROG00000042876 ENSRROG00000020854 MTX2 (ENSRROG00000030249) #31 ENSRROG00000028794 NFE2L2 (ENSRROG00000045317) #32 AGPS (ENSRROG00000035068) #33 Hominoidea ANCESTRAL SPECIES 15 ENSGT00940000155099.a ENSGT00390000000673.b.a.a #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000167313 ENSGT00390000008029.v ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 Gibbon MODERN SPECIES 14 OLA1 (ENSNLEG00000005817) #8 ENSNLEG00000030268 ENSNLEG00000033171 ENSNLEG00000005869 #9 SCRN3 (ENSNLEG00000005880) #10 GPR155 (ENSNLEG00000005896) #11 ENSNLEG00000033625 WIPF1 (ENSNLEG00000005907) #13 CHRNA1 (ENSNLEG00000005914) #14 CHN1 (ENSNLEG00000005923) #16 ENSNLEG00000028605 ATF2 (ENSNLEG00000005938) #17 ATP5MC3 (ENSNLEG00000005971) #18 LNPK (ENSNLEG00000005977) #20 EVX2 (ENSNLEG00000005999) #21 HOXD13 (ENSNLEG00000029303) #22 HOXD12 (ENSNLEG00000006006) #23 HOXD10 (ENSNLEG00000006010) #25 HOXD9 (ENSNLEG00000006011) #26 ENSNLEG00000006003 #27 HOXD4 (ENSNLEG00000006014) #28 HOXD3 (ENSNLEG00000006018) #29 ENSNLEG00000027160 HOXD1 (ENSNLEG00000006019) #30 MTX2 (ENSNLEG00000006020) #31 ENSNLEG00000035565 ENSNLEG00000029348 HNRNPA3 (ENSNLEG00000028401) NFE2L2 (ENSNLEG00000006029) #32 AGPS (ENSNLEG00000006030) #33 TTC30B (ENSNLEG00000033307) #34 Hominidae ANCESTRAL SPECIES 17 ENSGT00940000155099.a ENSGT00390000000673.b.a.a #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000167313 ENSGT00390000008029.v ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 Orangutan MODERN SPECIES 15 CDCA7 (ENSPPYG00000012940) SP3 (ENSPPYG00000012941) OLA1 (ENSPPYG00000012943) #8 SP9 (ENSPPYG00000033437) ENSPPYG00000012945 #9 ENSPPYG00000012946 #10 GPR155 (ENSPPYG00000012947) #11 WIPF1 (ENSPPYG00000012948) #13 CHRNA1 (ENSPPYG00000012949) #14 CHN1 (ENSPPYG00000012950) #16 ATF2 (ENSPPYG00000012951) #17 ENSPPYG00000041465 #7 ATP5MC3 (ENSPPYG00000037033) #18 LNPK (ENSPPYG00000032630) #20 EVX2 (ENSPPYG00000012955) #21 HOXD13 (ENSPPYG00000012956) #22 HOXD12 (ENSPPYG00000012957) #23 HOXD11 (ENSPPYG00000031598) #24 HOXD10 (ENSPPYG00000012958) #25 HOXD9 (ENSPPYG00000012959) #26 HOXD8 (ENSPPYG00000037201) #27 HOXD4 (ENSPPYG00000034536) #28 HOXD3 (ENSPPYG00000012963) #29 HOXD1 (ENSPPYG00000012964) #30 ENSPPYG00000037565 MTX2 (ENSPPYG00000012966) #31 HNRNPA3 (ENSPPYG00000012967) NFE2L2 (ENSPPYG00000012968) #32 AGPS (ENSPPYG00000012969) #33 TTC30B (ENSPPYG00000034101) #34 TTC30A (ENSPPYG00000038583) #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00940000155099.a ENSGT00390000000673.b.a.a #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000167313 ENSGT00390000008029.v ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.jb #34 Gorilla DUPLICATION Gorilla MODERN SPECIES 15 PJVK (ENSGGOG00000011071) PRKRA (ENSGGOG00000005754) OSBPL6 (ENSGGOG00000008266) RBM45 (ENSGGOG00000013981) ENSGGOG00000040977 ENSGGOG00000040822 PDE11A (ENSGGOG00000034968) TTC30A (ENSGGOG00000009811) #35 AGPS (ENSGGOG00000012114) #33 ENSGGOG00000037000 NFE2L2 (ENSGGOG00000001231) #32 HNRNPA3 (ENSGGOG00000006130) ENSGGOG00000043877 ENSGGOG00000037084 #10 MTX2 (ENSGGOG00000044125) #31 ENSGGOG00000040237 #22 ENSGGOG00000040635 #23 ENSGGOG00000041480 HOXD1 (ENSGGOG00000001348) #30 ENSGGOG00000037792 HOXD3 (ENSGGOG00000037089) #29 HOXD4 (ENSGGOG00000042533) #28 ENSGGOG00000009898 #27 HOXD9 (ENSGGOG00000001343) #26 HOXD10 (ENSGGOG00000001341) #25 ENSGGOG00000044084 ENSGGOG00000038035 #23 ENSGGOG00000041387 #22 EVX2 (ENSGGOG00000001335) #21 LNPK (ENSGGOG00000007852) #20 ATP5MC3 (ENSGGOG00000036796) #18 Gorilla MODERN SPECIES 15 ENSGGOG00000041018 ENSGGOG00000041228 SP3 (ENSGGOG00000011699) OLA1 (ENSGGOG00000022215) #8 SP9 (ENSGGOG00000007345) SCRN3 (ENSGGOG00000034896) #10 GPR155 (ENSGGOG00000004876) #11 ENSGGOG00000005480 WIPF1 (ENSGGOG00000016773) #13 CHRNA1 (ENSGGOG00000008036) #14 CHN1 (ENSGGOG00000002177) #16 ATF2 (ENSGGOG00000027461) #17 ATP5MC3 (ENSGGOG00000036796) #18 LNPK (ENSGGOG00000007852) #20 EVX2 (ENSGGOG00000001335) #21 ENSGGOG00000041387 #22 ENSGGOG00000038035 #23 ENSGGOG00000044084 HOXD10 (ENSGGOG00000001341) #25 HOXD9 (ENSGGOG00000001343) #26 ENSGGOG00000009898 #27 HOXD4 (ENSGGOG00000042533) #28 HOXD3 (ENSGGOG00000037089) #29 ENSGGOG00000037792 HOXD1 (ENSGGOG00000001348) #30 ENSGGOG00000041480 ENSGGOG00000040635 #23 ENSGGOG00000040237 #22 MTX2 (ENSGGOG00000044125) #31 ENSGGOG00000037084 #10 ENSGGOG00000043877 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00940000155099.a ENSGT00390000000673.b.a.a #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000167313 ENSGT00390000008029.v ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.jb #34 Human MODERN SPECIES 11 MAP3K20 (ENSG00000091436) CDCA7 (ENSG00000144354) SP3 (ENSG00000172845) OLA1 (ENSG00000138430) #8 SP9 (ENSG00000217236) CIR1 (ENSG00000138433) #9 SCRN3 (ENSG00000144306) #10 GPR155 (ENSG00000163328) #11 WIPF1 (ENSG00000115935) #13 CHRNA1 (ENSG00000138435) #14 CHN1 (ENSG00000128656) #16 ATF2 (ENSG00000115966) #17 ATP5MC3 (ENSG00000154518) #18 LNPK (ENSG00000144320) #20 EVX2 (ENSG00000174279) #21 HOXD13 (ENSG00000128714) #22 HOXD12 (ENSG00000170178) #23 HOXD11 (ENSG00000128713) #24 HOXD10 (ENSG00000128710) #25 HOXD9 (ENSG00000128709) #26 HOXD8 (ENSG00000175879) #27 HOXD3 (ENSG00000128652) #29 HOXD4 (ENSG00000170166) #28 HOXD1 (ENSG00000128645) #30 MTX2 (ENSG00000128654) #31 HNRNPA3 (ENSG00000170144) NFE2L2 (ENSG00000116044) #32 AGPS (ENSG00000018510) #33 TTC30B (ENSG00000196659) #34 TTC30A (ENSG00000197557) #35 PDE11A (ENSG00000128655) Pan ANCESTRAL SPECIES 12 ENSGT00940000155099.a ENSGT00390000000673.b.a.a #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000167313 ENSGT00390000008029.v ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00910000147400 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00910000147200 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.jb #34 Chimpanzee MODERN SPECIES 15 ENSPTRG00000051676 ENSPTRG00000044219 SP3 (ENSPTRG00000012647) OLA1 (ENSPTRG00000012650) #8 SP9 (ENSPTRG00000045805) CIR1 (ENSPTRG00000012652) #9 SCRN3 (ENSPTRG00000012653) #10 GPR155 (ENSPTRG00000012655) #11 WIPF1 (ENSPTRG00000012656) CHRNA1 (ENSPTRG00000012658) #14 CHN1 (ENSPTRG00000012659) #16 ATF2 (ENSPTRG00000012660) #17 ATP5MC3 (ENSPTRG00000047314) #18 LNPK (ENSPTRG00000012662) #20 EVX2 (ENSPTRG00000012663) #21 HOXD13 (ENSPTRG00000012664) #22 HOXD12 (ENSPTRG00000012665) #23 HOXD11 (ENSPTRG00000012666) #24 HOXD10 (ENSPTRG00000012667) #25 HOXD9 (ENSPTRG00000043464) #26 HOXD8 (ENSPTRG00000012669) #27 HOXD4 (ENSPTRG00000051862) #28 HOXD3 (ENSPTRG00000012672) #29 ENSPTRG00000051348 HOXD1 (ENSPTRG00000052716) #30 ENSPTRG00000023851 MTX2 (ENSPTRG00000012674) #31 ENSPTRG00000042815 HNRNPA3 (ENSPTRG00000012676) NFE2L2 (ENSPTRG00000012677) #32 AGPS (ENSPTRG00000012680) #33 Bonobo MODERN SPECIES 15 ENSPPAG00000027126 ENSPPAG00000037850 SP3 (ENSPPAG00000028328) OLA1 (ENSPPAG00000035004) #8 CIR1 (ENSPPAG00000041485) #9 SCRN3 (ENSPPAG00000032328) #10 GPR155 (ENSPPAG00000032733) #11 ENSPPAG00000040473 WIPF1 (ENSPPAG00000037968) #13 CHRNA1 (ENSPPAG00000024985) #14 ENSPPAG00000023882 #16 ATF2 (ENSPPAG00000027656) #17 ATP5MC3 (ENSPPAG00000036512) #18 LNPK (ENSPPAG00000030440) #20 ENSPPAG00000039855 #21 ENSPPAG00000010483 #22 HOXD12 (ENSPPAG00000017089) #23 ENSPPAG00000028125 #24 HOXD10 (ENSPPAG00000036046) #25 HOXD9 (ENSPPAG00000039242) #26 ENSPPAG00000034189 #27 HOXD4 (ENSPPAG00000034992) #28 HOXD3 (ENSPPAG00000031713) #29 ENSPPAG00000013988 ENSPPAG00000031665 #30 ENSPPAG00000025118 MTX2 (ENSPPAG00000043265) #31 ENSPPAG00000012679 HNRNPA3 (ENSPPAG00000023768) NFE2L2 (ENSPPAG00000037501) #32 AGPS (ENSPPAG00000036868) #33 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00940000161352 ENSGT00940000155436.o.a.b ENSGT00940000155099.a ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.lb #34 ENSGT00390000010116.mb #34 ENSGT00940000162151 Mas night monkey MODERN SPECIES 1333 ENSANAG00000011341 ENSANAG00000037338 #17 ENSANAG00000033889 #18 ENSANAG00000023367 ENSANAG00000021797 LNPK (ENSANAG00000019161) #20 EVX2 (ENSANAG00000031929) #21 HOXD13 (ENSANAG00000029500) #22 HOXD12 (ENSANAG00000008919) #23 HOXD11 (ENSANAG00000029678) #24 HOXD10 (ENSANAG00000025381) #25 HOXD9 (ENSANAG00000024699) #26 HOXD8 (ENSANAG00000026980) #27 HOXD4 (ENSANAG00000028028) #28 HOXD3 (ENSANAG00000026428) #29 HOXD1 (ENSANAG00000019775) #30 ENSANAG00000031061 MTX2 (ENSANAG00000022501) #31 HNRNPA3 (ENSANAG00000002931) NFE2L2 (ENSANAG00000023669) #32 AGPS (ENSANAG00000019626) #33 ENSANAG00000003240 #34 ENSANAG00000025414 Cebidae ANCESTRAL SPECIES 11 ENSGT00940000161352 ENSGT00940000155436.o.a.a ENSGT00940000155099.a ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.lb #34 ENSGT00390000010116.mb #34 ENSGT00940000162151 Marmoset MODERN SPECIES 18 SP9 (ENSCJAG00000061755) ENSCJAG00000081398 CIR1 (ENSCJAG00000007884) #9 SCRN3 (ENSCJAG00000007909) #10 GPR155 (ENSCJAG00000007947) #11 WIPF1 (ENSCJAG00000048519) #13 CHRNA1 (ENSCJAG00000008007) #14 CHN1 (ENSCJAG00000008041) #16 ATF2 (ENSCJAG00000008085) #17 ATP5MC3 (ENSCJAG00000008207) #18 ENSCJAG00000080703 ENSCJAG00000084464 ENSCJAG00000022954 LNPK (ENSCJAG00000008226) #20 EVX2 (ENSCJAG00000077487) #21 HOXD13 (ENSCJAG00000040882) #22 HOXD12 (ENSCJAG00000079626) #23 HOXD11 (ENSCJAG00000048503) #24 HOXD10 (ENSCJAG00000008269) #25 HOXD9 (ENSCJAG00000046789) #26 HOXD8 (ENSCJAG00000008284) #27 HOXD4 (ENSCJAG00000008286) #28 HOXD3 (ENSCJAG00000063715) #29 HOXD1 (ENSCJAG00000008290) #30 MTX2 (ENSCJAG00000039174) #31 ENSCJAG00000072603 ENSCJAG00000006928 NFE2L2 (ENSCJAG00000008340) #32 ENSCJAG00000059559 ENSCJAG00000021732 #34 AGPS (ENSCJAG00000021508) #33 Cebidae_a ANCESTRAL SPECIES 27 ENSGT00940000156075.a.a ENSGT00940000161352 ENSGT00940000155436.o.a.b ENSGT00940000155099.a ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.lb #34 ENSGT00390000010116.mb #34 ENSGT00940000162151 Capuchin MODERN SPECIES 110 ENSCCAG00000028608 ENSCCAG00000035969 SP9 (ENSCCAG00000031565) CIR1 (ENSCCAG00000030492) #9 SCRN3 (ENSCCAG00000022566) #10 GPR155 (ENSCCAG00000032455) #11 WIPF1 (ENSCCAG00000012994) #13 CHRNA1 (ENSCCAG00000032209) #14 CHN1 (ENSCCAG00000027038) #16 ENSCCAG00000034541 ATF2 (ENSCCAG00000035902) #17 ENSCCAG00000020514 #18 ENSCCAG00000015947 LNPK (ENSCCAG00000022702) #20 EVX2 (ENSCCAG00000032502) #21 HOXD13 (ENSCCAG00000032945) #22 HOXD12 (ENSCCAG00000026325) #23 HOXD11 (ENSCCAG00000034968) #24 HOXD10 (ENSCCAG00000020764) #25 HOXD9 (ENSCCAG00000021007) #26 HOXD8 (ENSCCAG00000001172) #27 ENSCCAG00000035403 #28 Bolivian squirrel monkey MODERN SPECIES 46 MAP3K20 (ENSSBOG00000023872) ENSSBOG00000029333 SP3 (ENSSBOG00000035329) ENSSBOG00000002999 #8 ENSSBOG00000020259 CIR1 (ENSSBOG00000028527) #9 SCRN3 (ENSSBOG00000033089) #10 GPR155 (ENSSBOG00000034957) #11 WIPF1 (ENSSBOG00000032169) #13 CHRNA1 (ENSSBOG00000035763) #14 CHN1 (ENSSBOG00000016307) #16 ATF2 (ENSSBOG00000025461) #17 ATP5MC3 (ENSSBOG00000022688) #18 LNPK (ENSSBOG00000023054) #20 EVX2 (ENSSBOG00000034364) #21 HOXD13 (ENSSBOG00000032579) #22 HOXD12 (ENSSBOG00000025723) #23 HOXD10 (ENSSBOG00000020553) #25 HOXD9 (ENSSBOG00000031095) #26 ENSSBOG00000029405 #27 HOXD4 (ENSSBOG00000031535) #28 HOXD3 (ENSSBOG00000031894) #29 HOXD1 (ENSSBOG00000030906) #30 MTX2 (ENSSBOG00000025795) #31 HNRNPA3 (ENSSBOG00000034307) NFE2L2 (ENSSBOG00000022740) #32 AGPS (ENSSBOG00000026720) #33 ENSSBOG00000019156 #34 ENSSBOG00000018055 #34 PDE11A (ENSSBOG00000026746) RBM45 (ENSSBOG00000005469) Tarsier MODERN SPECIES 1221 EVX2 (ENSTSYG00000003728) #21 HOXD13 (ENSTSYG00000003737) #22 HOXD12 (ENSTSYG00000003740) #23 ENSTSYG00000035865 #24 HOXD10 (ENSTSYG00000002769) #25 Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000164264 Lemuriformes ANCESTRAL SPECIES 5 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b.v.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Lemuriformes_a ANCESTRAL SPECIES 69 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b.v.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Coquerels sifaka MODERN SPECIES 478 CDCA7 (ENSPCOG00000001432) SP3 (ENSPCOG00000017224) ENSPCOG00000017353 #8 SP9 (ENSPCOG00000018883) CIR1 (ENSPCOG00000014298) #9 SCRN3 (ENSPCOG00000015456) #10 GPR155 (ENSPCOG00000014376) #11 ENSPCOG00000018466 ENSPCOG00000015733 CHRNA1 (ENSPCOG00000020642) #14 CHN1 (ENSPCOG00000018830) #16 ATF2 (ENSPCOG00000025416) #17 ATP5MC3 (ENSPCOG00000016374) #18 LNPK (ENSPCOG00000026983) #20 EVX2 (ENSPCOG00000022416) #21 HOXD13 (ENSPCOG00000018735) #22 HOXD12 (ENSPCOG00000022036) #23 HOXD11 (ENSPCOG00000015055) #24 HOXD10 (ENSPCOG00000023637) #25 HOXD9 (ENSPCOG00000026809) #26 HOXD8 (ENSPCOG00000024233) #27 HOXD4 (ENSPCOG00000018337) #28 HOXD3 (ENSPCOG00000017195) #29 HOXD1 (ENSPCOG00000024445) #30 MTX2 (ENSPCOG00000025077) #31 NFE2L2 (ENSPCOG00000007362) #32 AGPS (ENSPCOG00000018665) #33 PDE11A (ENSPCOG00000025830) ENSPCOG00000025842 ENSPCOG00000028806 RBM45 (ENSPCOG00000021526) Greater bamboo lemur MODERN SPECIES 243 CDCA7 (ENSPSMG00000024083) SP3 (ENSPSMG00000024117) OLA1 (ENSPSMG00000024129) #8 SP9 (ENSPSMG00000024136) CIR1 (ENSPSMG00000024153) #9 SCRN3 (ENSPSMG00000024170) #10 GPR155 (ENSPSMG00000024199) #11 WIPF1 (ENSPSMG00000024219) #13 CHRNA1 (ENSPSMG00000024264) #14 CHN1 (ENSPSMG00000024301) #16 ATF2 (ENSPSMG00000024416) #17 ATP5MC3 (ENSPSMG00000024446) #18 LNPK (ENSPSMG00000024460) #20 ENSPSMG00000024465 EVX2 (ENSPSMG00000024469) #21 HOXD13 (ENSPSMG00000024474) #22 HOXD12 (ENSPSMG00000024476) #23 HOXD11 (ENSPSMG00000024479) #24 HOXD10 (ENSPSMG00000024482) #25 HOXD9 (ENSPSMG00000024487) #26 HOXD8 (ENSPSMG00000024501) #27 HOXD4 (ENSPSMG00000024504) #28 HOXD3 (ENSPSMG00000024507) #29 ENSPSMG00000024512 HOXD1 (ENSPSMG00000024516) #30 NNT (ENSPSMG00000024528) PAIP1 (ENSPSMG00000024554) ENSPSMG00000024563 Mouse lemur MODERN SPECIES 30 SP3 (ENSMICG00000014796) ENSMICG00000000354 #8 ENSMICG00000007356 SP9 (ENSMICG00000031506) CIR1 (ENSMICG00000026886) #9 SCRN3 (ENSMICG00000000366) #10 GPR155 (ENSMICG00000000369) #11 ENSMICG00000031974 CHRNA1 (ENSMICG00000014284) #14 ENSMICG00000038672 CHN1 (ENSMICG00000014292) #16 ATF2 (ENSMICG00000006417) #17 ATP5MC3 (ENSMICG00000006421) #18 LNPK (ENSMICG00000027707) #20 EVX2 (ENSMICG00000035343) #21 HOXD13 (ENSMICG00000002170) #22 HOXD12 (ENSMICG00000002172) #23 HOXD11 (ENSMICG00000048033) #24 HOXD10 (ENSMICG00000028373) #25 HOXD9 (ENSMICG00000031229) #26 HOXD8 (ENSMICG00000004277) #27 HOXD4 (ENSMICG00000043209) #28 HOXD3 (ENSMICG00000004286) #29 HOXD1 (ENSMICG00000044650) #30 MTX2 (ENSMICG00000004295) #31 ENSMICG00000027841 NFE2L2 (ENSMICG00000009559) #32 AGPS (ENSMICG00000003750) #33 ENSMICG00000003768 #34 ENSMICG00000046051 #34 ENSMICG00000030225 Bushbaby MODERN SPECIES 163 SP3 (ENSOGAG00000026846) OLA1 (ENSOGAG00000016557) #8 SP9 (ENSOGAG00000034062) CIR1 (ENSOGAG00000016564) #9 SCRN3 (ENSOGAG00000016569) #10 GPR155 (ENSOGAG00000016571) #11 WIPF1 (ENSOGAG00000016579) #13 CHRNA1 (ENSOGAG00000000890) #14 CHN1 (ENSOGAG00000000894) #16 ATF2 (ENSOGAG00000011373) #17 ATP5MC3 (ENSOGAG00000027578) #18 ENSOGAG00000026184 ENSOGAG00000030354 LNPK (ENSOGAG00000030372) #20 EVX2 (ENSOGAG00000025378) #21 HOXD13 (ENSOGAG00000027055) #22 HOXD12 (ENSOGAG00000015689) #23 HOXD11 (ENSOGAG00000029520) #24 HOXD10 (ENSOGAG00000015694) #25 HOXD9 (ENSOGAG00000015697) #26 HOXD8 (ENSOGAG00000015707) #27 HOXD4 (ENSOGAG00000029168) #28 HOXD3 (ENSOGAG00000015710) #29 HOXD1 (ENSOGAG00000015712) #30 MTX2 (ENSOGAG00000016422) #31 ENSOGAG00000032690 ENSOGAG00000028132 NFE2L2 (ENSOGAG00000034393) #32 AGPS (ENSOGAG00000013184) #33 ENSOGAG00000013189 #34 ENSOGAG00000013191 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Glires ANCESTRAL SPECIES 14 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Rodentia ANCESTRAL SPECIES 14 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Rodentia_B ANCESTRAL SPECIES 12 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Myomorpha ANCESTRAL SPECIES 10 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b.p ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Muroidea ANCESTRAL SPECIES 34 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b.p ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00390000010116.y.a #34 ENSGT00940000162151 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b.p ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00390000010116.y.a.a #34 ENSGT00940000162151 Murinae ANCESTRAL SPECIES 1 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.a ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00390000010116.y.a.b #34 ENSGT00390000010116.y.a.a #34 Mus ANCESTRAL SPECIES 1 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.a ENSGT00940000153147.m.a.a.a.b.a.b.p.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00390000010116.y.a.b #34 Mus_A ANCESTRAL SPECIES ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.a ENSGT00940000153147.m.a.a.a.b.a.b.p.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00390000010116.y.a.b #34 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000161352 ENSGT00940000155436.k ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.a ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00390000010116.y.a.b #34 ENSGT00390000010116.y.a.a #34 Mouse MODERN SPECIES 11 Map3k20 (ENSMUSG00000004085) Cdca7 (ENSMUSG00000055612) Sp3 (ENSMUSG00000027109) Ola1 (ENSMUSG00000027108) #8 Sp9 (ENSMUSG00000068859) Cir1 (ENSMUSG00000041777) #9 Scrn3 (ENSMUSG00000008226) #10 Gpr155 (ENSMUSG00000041762) #11 Wipf1 (ENSMUSG00000075284) #13 Chrna1 (ENSMUSG00000027107) #14 Chn1 (ENSMUSG00000056486) #16 Atf2 (ENSMUSG00000027104) #17 Atp5g3 (ENSMUSG00000018770) #18 Lnpk (ENSMUSG00000009207) #20 Evx2 (ENSMUSG00000001815) #21 Hoxd13 (ENSMUSG00000001819) #22 Hoxd12 (ENSMUSG00000001823) #23 Hoxd11 (ENSMUSG00000042499) #24 Hoxd10 (ENSMUSG00000050368) #25 Hoxd9 (ENSMUSG00000043342) #26 Hoxd8 (ENSMUSG00000027102) #27 Hoxd3 (ENSMUSG00000079277) #29 Hoxd4 (ENSMUSG00000101174) #28 Hoxd1 (ENSMUSG00000042448) #30 Mtx2 (ENSMUSG00000027099) #31 Hnrnpa3 (ENSMUSG00000059005) Nfe2l2 (ENSMUSG00000015839) #32 Agps (ENSMUSG00000042410) #33 Ttc30b (ENSMUSG00000075273) #34 Ttc30a2 (ENSMUSG00000075272) #34 Ttc30a1 (ENSMUSG00000075271) #34 Mus_C ANCESTRAL SPECIES ENSGT00940000161352 ENSGT00940000155436.k ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.b ENSGT00940000153147.m.a.a.a.b.a.b.p.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00940000162151 spretus MODERN SPECIES 11 Cdca7 (MGP_SPRETEiJ_G0024575) Sp3 (MGP_SPRETEiJ_G0024576) MGP_SPRETEiJ_G0024577 Ola1 (MGP_SPRETEiJ_G0024578) #8 Sp9 (MGP_SPRETEiJ_G0024579) Cir1 (MGP_SPRETEiJ_G0024580) #9 Scrn3 (MGP_SPRETEiJ_G0024581) #10 Gpr155 (MGP_SPRETEiJ_G0024582) #11 Wipf1 (MGP_SPRETEiJ_G0024583) #13 Chrna1 (MGP_SPRETEiJ_G0024584) #14 Chn1 (MGP_SPRETEiJ_G0024585) #16 Atf2 (MGP_SPRETEiJ_G0024586) #17 Atp5g3 (MGP_SPRETEiJ_G0024587) #18 Lnpk (MGP_SPRETEiJ_G0024588) #20 Evx2 (MGP_SPRETEiJ_G0024589) #21 Hoxd13 (MGP_SPRETEiJ_G0024590) #22 Hoxd12 (MGP_SPRETEiJ_G0024591) #23 Hoxd11 (MGP_SPRETEiJ_G0024592) #24 Hoxd10 (MGP_SPRETEiJ_G0024593) #25 Hoxd9 (MGP_SPRETEiJ_G0024594) #26 Hoxd8 (MGP_SPRETEiJ_G0024595) #27 Hoxd3 (MGP_SPRETEiJ_G0024596) #29 Hoxd4 (MGP_SPRETEiJ_G0024597) #28 MGP_SPRETEiJ_G0024598 #28 Hoxd1 (MGP_SPRETEiJ_G0024599) #30 Mtx2 (MGP_SPRETEiJ_G0024600) #31 MGP_SPRETEiJ_G0024601 Nfe2l2 (MGP_SPRETEiJ_G0024602) #32 Agps (MGP_SPRETEiJ_G0024603) #33 MGP_SPRETEiJ_G0024604 #34 Pde11a (MGP_SPRETEiJ_G0024605) Steppe mouse MODERN SPECIES 3326 ENSMSIG00000007302 Ola1 (ENSMSIG00000007200) #8 Sp9 (ENSMSIG00000007182) Cir1 (ENSMSIG00000007130) #9 Scrn3 (ENSMSIG00000007111) #10 Gpr155 (ENSMSIG00000006975) #11 Wipf1 (ENSMSIG00000006899) #13 Chrna1 (ENSMSIG00000006852) #14 Chn1 (ENSMSIG00000006692) #16 ENSMSIG00000006659 Atf2 (ENSMSIG00000006546) #17 Atp5g3 (ENSMSIG00000006512) #18 ENSMSIG00000006495 Lnpk (ENSMSIG00000006386) #20 Evx2 (ENSMSIG00000006361) #21 Hoxd13 (ENSMSIG00000006348) #22 Hoxd12 (ENSMSIG00000006333) #23 Hoxd11 (ENSMSIG00000006326) #24 Hoxd10 (ENSMSIG00000006313) #25 Hoxd9 (ENSMSIG00000006304) #26 Hoxd8 (ENSMSIG00000006283) #27 ENSMSIG00000006186 #28 Hoxd3 (ENSMSIG00000006158) #29 Hoxd1 (ENSMSIG00000006137) #30 Mtx2 (ENSMSIG00000006053) #31 ENSMSIG00000006005 ENSMSIG00000005981 ENSMSIG00000005709 Nfe2l2 (ENSMSIG00000005673) #32 Ryukyu mouse MODERN SPECIES 11 Cdca7 (MGP_CAROLIEiJ_G0023652) Sp3 (MGP_CAROLIEiJ_G0023653) MGP_CAROLIEiJ_G0023654 Ola1 (MGP_CAROLIEiJ_G0023655) #8 Sp9 (MGP_CAROLIEiJ_G0023656) Cir1 (MGP_CAROLIEiJ_G0023657) #9 Scrn3 (MGP_CAROLIEiJ_G0023658) #10 Gpr155 (MGP_CAROLIEiJ_G0023659) #11 Wipf1 (MGP_CAROLIEiJ_G0023660) #13 Chrna1 (MGP_CAROLIEiJ_G0023661) #14 Chn1 (MGP_CAROLIEiJ_G0023662) #16 Atf2 (MGP_CAROLIEiJ_G0023663) #17 Atp5g3 (MGP_CAROLIEiJ_G0023664) #18 Lnpk (MGP_CAROLIEiJ_G0023665) #20 Evx2 (MGP_CAROLIEiJ_G0023666) #21 Hoxd13 (MGP_CAROLIEiJ_G0023667) #22 Hoxd12 (MGP_CAROLIEiJ_G0023668) #23 Hoxd11 (MGP_CAROLIEiJ_G0023669) #24 Hoxd10 (MGP_CAROLIEiJ_G0023670) #25 Hoxd9 (MGP_CAROLIEiJ_G0023671) #26 Hoxd8 (MGP_CAROLIEiJ_G0023672) #27 Hoxd3 (MGP_CAROLIEiJ_G0023673) #29 Hoxd4 (MGP_CAROLIEiJ_G0023674) #28 MGP_CAROLIEiJ_G0023675 #28 Hoxd1 (MGP_CAROLIEiJ_G0023676) #30 Mtx2 (MGP_CAROLIEiJ_G0023677) #31 MGP_CAROLIEiJ_G0023678 Nfe2l2 (MGP_CAROLIEiJ_G0023679) #32 Agps (MGP_CAROLIEiJ_G0023680) #33 MGP_CAROLIEiJ_G0023681 #34 MGP_CAROLIEiJ_G0023682 #34 Shrew mouse MODERN SPECIES 16 Cdca7 (MGP_PahariEiJ_G0025104) Sp3 (MGP_PahariEiJ_G0025105) MGP_PahariEiJ_G0025106 Ola1 (MGP_PahariEiJ_G0025107) #8 Sp9 (MGP_PahariEiJ_G0025108) MGP_PahariEiJ_G0025109 #9 Scrn3 (MGP_PahariEiJ_G0025110) #10 Gpr155 (MGP_PahariEiJ_G0025111) #11 Wipf1 (MGP_PahariEiJ_G0025112) #13 Chrna1 (MGP_PahariEiJ_G0025113) #14 MGP_PahariEiJ_G0025114 #16 Atf2 (MGP_PahariEiJ_G0025115) #17 Atp5g3 (MGP_PahariEiJ_G0025116) #18 Lnpk (MGP_PahariEiJ_G0025117) #20 Evx2 (MGP_PahariEiJ_G0025118) #21 Hoxd13 (MGP_PahariEiJ_G0025119) #22 Hoxd12 (MGP_PahariEiJ_G0025120) #23 Hoxd11 (MGP_PahariEiJ_G0025121) #24 Hoxd10 (MGP_PahariEiJ_G0025122) #25 Hoxd9 (MGP_PahariEiJ_G0025123) #26 Hoxd8 (MGP_PahariEiJ_G0025124) #27 Hoxd3 (MGP_PahariEiJ_G0025125) #29 Hoxd4 (MGP_PahariEiJ_G0025126) #28 MGP_PahariEiJ_G0025127 #28 Hoxd1 (MGP_PahariEiJ_G0025128) #30 Mtx2 (MGP_PahariEiJ_G0025129) #31 Hnrnpa3 (MGP_PahariEiJ_G0025130) Nfe2l2 (MGP_PahariEiJ_G0025131) #32 MGP_PahariEiJ_G0025132 #33 MGP_PahariEiJ_G0025133 #34 MGP_PahariEiJ_G0025134 #34 Rat MODERN SPECIES 13 Ola1 (ENSRNOG00000019047) #8 ENSRNOG00000032195 Sp9 (ENSRNOG00000028187) Cir1 (ENSRNOG00000018719) #9 Scrn3 (ENSRNOG00000018657) #10 Gpr155 (ENSRNOG00000018485) #11 Wipf1 (ENSRNOG00000018406) #13 Rbx1-ps2 (ENSRNOG00000067031) Chrna1 (ENSRNOG00000018286) #14 Chn1 (ENSRNOG00000017939) #16 ENSRNOG00000068403 Atf2 (ENSRNOG00000001597) #17 Atp5mc3 (ENSRNOG00000001596) #18 Lnpk (ENSRNOG00000001593) #20 Evx2 (ENSRNOG00000001589) #21 Hoxd13 (ENSRNOG00000001588) #22 Hoxd12 (ENSRNOG00000001587) #23 Hoxd11 (ENSRNOG00000069591) #24 Hoxd10 (ENSRNOG00000001581) #25 Hoxd9 (ENSRNOG00000001580) #26 Hoxd8 (ENSRNOG00000071108) #27 Hoxd4 (ENSRNOG00000001578) #28 AABR07052559.1 (ENSRNOG00000053144) Hoxd3 (ENSRNOG00000001577) #29 Hoxd1 (ENSRNOG00000001572) #30 Mtx2 (ENSRNOG00000001559) #31 Hnrnpa3 (ENSRNOG00000052968) Nfe2l2 (ENSRNOG00000001548) #32 ENSRNOG00000066660 Agps (ENSRNOG00000001547) #33 Ttc30b (ENSRNOG00000059460) #34 Cricetidae ANCESTRAL SPECIES 12 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b.p ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00390000010116.y.a.a #34 ENSGT00940000162151 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000156075.a.a ENSGT00940000161352 ENSGT00940000155436 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000171387 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000154808.a.a ENSGT00940000153147.m.a.a.a.b.a.b.p ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00390000010116.y.a.a #34 Golden Hamster MODERN SPECIES 618 ENSMAUG00000020351 ENSMAUG00000001485 Ola1 (ENSMAUG00000019168) #8 Sp9 (ENSMAUG00000020520) ENSMAUG00000019383 #9 Scrn3 (ENSMAUG00000020703) #10 Gpr155 (ENSMAUG00000019481) #11 ENSMAUG00000019796 Chrna1 (ENSMAUG00000017924) #14 Chn1 (ENSMAUG00000018455) #16 Atf2 (ENSMAUG00000018366) #17 Atp5g3 (ENSMAUG00000017685) #18 ENSMAUG00000020495 Lnpk (ENSMAUG00000018821) #20 Evx2 (ENSMAUG00000020383) #21 Hoxd13 (ENSMAUG00000017185) #22 Hoxd12 (ENSMAUG00000018416) #23 ENSMAUG00000020249 #24 Hoxd10 (ENSMAUG00000016731) #25 Hoxd9 (ENSMAUG00000018538) #26 Hoxd8 (ENSMAUG00000018092) #27 Hoxd4 (ENSMAUG00000018545) #28 Hoxd3 (ENSMAUG00000018318) #29 Hoxd1 (ENSMAUG00000018401) #30 Mtx2 (ENSMAUG00000017870) #31 ENSMAUG00000017462 Nfe2l2 (ENSMAUG00000017700) #32 Agps (ENSMAUG00000017317) #33 Pde11a (ENSMAUG00000021257) Cyct (ENSMAUG00000016722) Rbm45 (ENSMAUG00000016948) Chinese hamster chok1gshd MODERN SPECIES 188 ENSCGRG00001003688 Ola1 (ENSCGRG00001001469) #8 Sp9 (ENSCGRG00001024896) Cir1 (ENSCGRG00001015518) #9 Scrn3 (ENSCGRG00001014709) #10 Gpr155 (ENSCGRG00001014219) #11 ENSCGRG00001021853 Chrna1 (ENSCGRG00001020291) #14 ENSCGRG00001019803 Chn1 (ENSCGRG00001019152) #16 Atf2 (ENSCGRG00001015584) #17 Atp5g3 (ENSCGRG00001012041) #18 Lnpk (ENSCGRG00001011515) #20 ENSCGRG00001006802 Evx2 (ENSCGRG00001003649) #21 Hoxd13 (ENSCGRG00001001661) #22 Hoxd12 (ENSCGRG00001000877) #23 Hoxd11 (ENSCGRG00001010386) #24 Hoxd10 (ENSCGRG00001008302) #25 Hoxd9 (ENSCGRG00001005991) #26 Hoxd8 (ENSCGRG00001013130) #27 Hoxd4 (ENSCGRG00001012360) #28 Hoxd3 (ENSCGRG00001011863) #29 Hoxd1 (ENSCGRG00001011572) #30 ENSCGRG00001014512 Mtx2 (ENSCGRG00001014247) #31 ENSCGRG00001003235 ##7 ENSCGRG00001008592 Nfe2l2 (ENSCGRG00001005715) #32 Agps (ENSCGRG00001003863) #33 Ttc30b (ENSCGRG00001002157) #34 Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b.p ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.y.b #34 ENSGT00390000010116.y.a.a #34 ENSGT00940000162151 Northern American deer mouse MODERN SPECIES 17 Cdca7 (ENSPEMG00000022184) Sp3 (ENSPEMG00000022766) Ola1 (ENSPEMG00000021970) #8 Sp9 (ENSPEMG00000029035) Cir1 (ENSPEMG00000022223) #9 Scrn3 (ENSPEMG00000022424) #10 Gpr155 (ENSPEMG00000022602) #11 Wipf1 (ENSPEMG00000013848) #13 Chrna1 (ENSPEMG00000012571) #14 Chn1 (ENSPEMG00000022535) #16 Atf2 (ENSPEMG00000021625) #17 Atp5g3 (ENSPEMG00000023766) #18 ENSPEMG00000008662 Lnpk (ENSPEMG00000017827) #20 Evx2 (ENSPEMG00000022145) #21 Hoxd13 (ENSPEMG00000022412) #22 Hoxd12 (ENSPEMG00000019240) #23 ENSPEMG00000018816 #24 Hoxd10 (ENSPEMG00000030445) #25 Hoxd9 (ENSPEMG00000006162) #26 ENSPEMG00000028623 #27 ENSPEMG00000029322 Hoxd4 (ENSPEMG00000024627) #28 Hoxd3 (ENSPEMG00000028862) #29 Hoxd1 (ENSPEMG00000021389) #30 Mtx2 (ENSPEMG00000022093) #31 Hnrnpa3 (ENSPEMG00000021885) Nfe2l2 (ENSPEMG00000023181) #32 Agps (ENSPEMG00000010561) #33 ENSPEMG00000023662 Ttc30b (ENSPEMG00000001902) #34 Prairie vole MODERN SPECIES 12 Cdca7 (ENSMOCG00000015927) Sp3 (ENSMOCG00000022929) ENSMOCG00000003269 ENSMOCG00000003125 #8 Sp9 (ENSMOCG00000019136) Cir1 (ENSMOCG00000017545) #9 Scrn3 (ENSMOCG00000018966) #10 Gpr155 (ENSMOCG00000003950) #11 ENSMOCG00000014660 Chrna1 (ENSMOCG00000020367) #14 Chn1 (ENSMOCG00000005574) #16 Atf2 (ENSMOCG00000015301) #17 ENSMOCG00000012786 #18 Lnpk (ENSMOCG00000022345) #20 Evx2 (ENSMOCG00000010466) #21 Hoxd13 (ENSMOCG00000014618) #22 Hoxd12 (ENSMOCG00000018953) #23 Hoxd11 (ENSMOCG00000019226) #24 Hoxd10 (ENSMOCG00000006052) #25 Hoxd9 (ENSMOCG00000005870) #26 Hoxd8 (ENSMOCG00000022746) #27 Hoxd3 (ENSMOCG00000022552) #29 Hoxd4 (ENSMOCG00000013646) #28 Hoxd1 (ENSMOCG00000014086) #30 Mtx2 (ENSMOCG00000017110) #31 ENSMOCG00000019409 Nfe2l2 (ENSMOCG00000020760) #32 Agps (ENSMOCG00000017476) #33 Ttc30b (ENSMOCG00000001580) #34 ENSMOCG00000001098 Ttc30a2 (ENSMOCG00000002802) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 1735 Cdca7 (ENSNGAG00000005943) ENSNGAG00000011265 ENSNGAG00000012551 Ola1 (ENSNGAG00000017639) #8 Sp9 (ENSNGAG00000002858) Cir1 (ENSNGAG00000023091) #9 Scrn3 (ENSNGAG00000008783) #10 Gpr155 (ENSNGAG00000019246) #11 ENSNGAG00000022478 #13 Chrna1 (ENSNGAG00000023534) #14 Chn1 (ENSNGAG00000021893) #16 Atf2 (ENSNGAG00000003870) #17 Atp5g3 (ENSNGAG00000004748) #18 Lnpk (ENSNGAG00000023466) #20 Evx2 (ENSNGAG00000023877) #21 Hoxd13 (ENSNGAG00000023727) #22 Hoxd12 (ENSNGAG00000023455) #23 Hoxd11 (ENSNGAG00000023438) #24 Hoxd10 (ENSNGAG00000023868) #25 Hoxd9 (ENSNGAG00000011105) #26 Hoxd8 (ENSNGAG00000011799) #27 Hoxd4 (ENSNGAG00000020270) #28 Hoxd3 (ENSNGAG00000021055) #29 Hoxd1 (ENSNGAG00000021714) #30 Mtx2 (ENSNGAG00000020555) #31 ENSNGAG00000021745 Nfe2l2 (ENSNGAG00000022809) #32 Agps (ENSNGAG00000020263) #33 ENSNGAG00000022555 #34 Pde11a (ENSNGAG00000023493) Cyct (ENSNGAG00000023547) Lesser Egyptian jerboa MODERN SPECIES 75 ENSJJAG00000016192 Cdca7 (ENSJJAG00000014387) Sp3 (ENSJJAG00000011138) ENSJJAG00000022958 #8 Sp9 (ENSJJAG00000020056) Cir1 (ENSJJAG00000010849) #9 Scrn3 (ENSJJAG00000021027) #10 Chrna1 (ENSJJAG00000018710) #14 ENSJJAG00000014124 Chn1 (ENSJJAG00000015001) #16 Atf2 (ENSJJAG00000015836) #17 Atp5g3 (ENSJJAG00000022403) #18 ENSJJAG00000013766 Lnpk (ENSJJAG00000011710) #20 Evx2 (ENSJJAG00000017484) #21 Hoxd13 (ENSJJAG00000016388) #22 Hoxd12 (ENSJJAG00000016261) #23 Hoxd11 (ENSJJAG00000012344) #24 Hoxd10 (ENSJJAG00000011932) #25 Hoxd1 (ENSJJAG00000019059) #30 ENSJJAG00000019952 ENSJJAG00000013228 #31 ENSJJAG00000000149 Nfe2l2 (ENSJJAG00000019899) #32 Agps (ENSJJAG00000016720) #33 ENSJJAG00000014867 #34 ENSJJAG00000012087 #34 Pde11a (ENSJJAG00000018583) Rbm45 (ENSJJAG00000001312) Osbpl6 (ENSJJAG00000017863) Prkra (ENSJJAG00000013031) Rodentia_A ANCESTRAL SPECIES 13 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Sciuridae ANCESTRAL SPECIES 10 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a.xb #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Marmotini ANCESTRAL SPECIES 2 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a.xb.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.gb #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Marmotini_b ANCESTRAL SPECIES 10 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296 #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a.xb.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116.gb #34 ENSGT00940000162151 ENSGT00940000157883.a.b.e.a Arctic ground squirrel MODERN SPECIES 323 WIPF1 (ENSUPAG00010020649) #13 CHRNA1 (ENSUPAG00010020641) #14 CHN1 (ENSUPAG00010020575) #16 ATF2 (ENSUPAG00010020491) #17 ENSUPAG00010020485 #18 LNPK (ENSUPAG00010020452) #20 EVX2 (ENSUPAG00010020442) #21 HOXD13 (ENSUPAG00010020441) #22 HOXD12 (ENSUPAG00010020440) #23 HOXD11 (ENSUPAG00010020439) #24 HOXD10 (ENSUPAG00010020434) #25 HOXD9 (ENSUPAG00010020431) #26 HOXD8 (ENSUPAG00010020425) #27 HOXD4 (ENSUPAG00010020416) #28 HOXD3 (ENSUPAG00010020410) #29 HOXD1 (ENSUPAG00010020407) #30 ENSUPAG00010020400 MTX2 (ENSUPAG00010020394) #31 Squirrel MODERN SPECIES 109 RAPGEF4 (ENSSTOG00000001706) MAP3K20 (ENSSTOG00000022529) ENSSTOG00000009026 SP3 (ENSSTOG00000023955) OLA1 (ENSSTOG00000015547) #8 CIR1 (ENSSTOG00000001233) #9 SCRN3 (ENSSTOG00000001236) #10 GPR155 (ENSSTOG00000001239) #11 ENSSTOG00000004271 #13 CHRNA1 (ENSSTOG00000004281) #14 CHN1 (ENSSTOG00000004301) #16 ATF2 (ENSSTOG00000014079) #17 ENSSTOG00000013572 #18 LNPK (ENSSTOG00000014498) #20 EVX2 (ENSSTOG00000014512) #21 HOXD13 (ENSSTOG00000004117) #22 HOXD12 (ENSSTOG00000004918) #23 HOXD10 (ENSSTOG00000003935) #25 HOXD9 (ENSSTOG00000026761) #26 ENSSTOG00000023453 #27 HOXD4 (ENSSTOG00000029055) #28 HOXD3 (ENSSTOG00000014680) #29 HOXD1 (ENSSTOG00000012230) #30 MTX2 (ENSSTOG00000014688) #31 ENSSTOG00000030884 HNRNPA3 (ENSSTOG00000025125) NFE2L2 (ENSSTOG00000000313) #32 AGPS (ENSSTOG00000012623) #33 ENSSTOG00000003267 #34 PDE11A (ENSSTOG00000012639) ENSSTOG00000008853 Alpin marmot MODERN SPECIES 5 CDCA7 (ENSMMMG00000023690) SP3 (ENSMMMG00000023692) OLA1 (ENSMMMG00000023695) #8 CIR1 (ENSMMMG00000023697) #9 ENSMMMG00000023700 #10 ENSMMMG00000023702 #10 GPR155 (ENSMMMG00000023705) #11 ENSMMMG00000023714 WIPF1 (ENSMMMG00000023716) #13 CHRNA1 (ENSMMMG00000023717) #14 CHN1 (ENSMMMG00000023718) #16 ENSMMMG00000023730 ATF2 (ENSMMMG00000023733) #17 ENSMMMG00000023748 #18 LNPK (ENSMMMG00000023755) #20 HOXD13 (ENSMMMG00000023759) #22 HOXD12 (ENSMMMG00000023760) #23 ENSMMMG00000023762 #24 HOXD10 (ENSMMMG00000023763) #25 HOXD9 (ENSMMMG00000023764) #26 ENSMMMG00000023765 #27 HOXD4 (ENSMMMG00000023767) #28 HOXD3 (ENSMMMG00000023768) #29 MTX2 (ENSMMMG00000023772) #31 NFE2L2 (ENSMMMG00000023776) #32 AGPS (ENSMMMG00000023778) #33 Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005002549 OLA1 (ENSSVLG00005002579) #8 ENSSVLG00005002643 SP9 (ENSSVLG00005002657) CIR1 (ENSSVLG00005002678) #9 SCRN3 (ENSSVLG00005002703) #10 GPR155 (ENSSVLG00005002750) #11 WIPF1 (ENSSVLG00005002786) #13 CHRNA1 (ENSSVLG00005002856) #14 CHN1 (ENSSVLG00005003041) #16 ENSSVLG00005003279 #17 ENSSVLG00005003430 #18 ENSSVLG00005003466 LNPK (ENSSVLG00005003500) #20 EVX2 (ENSSVLG00005003539) #21 HOXD13 (ENSSVLG00005003554) #22 HOXD12 (ENSSVLG00005003565) #23 HOXD11 (ENSSVLG00005003581) #24 HOXD10 (ENSSVLG00005003599) #25 HOXD9 (ENSSVLG00005003618) #26 HOXD8 (ENSSVLG00005003645) #27 HOXD4 (ENSSVLG00005003676) #28 HOXD1 (ENSSVLG00005003762) #30 MTX2 (ENSSVLG00005003812) #31 ENSSVLG00005003881 ENSSVLG00005003903 #32 AGPS (ENSSVLG00005003959) #33 ENSSVLG00005003996 #34 ENSSVLG00005004006 #34 ENSSVLG00005004018 #34 PDE11A (ENSSVLG00005004050) Hystricomorpha ANCESTRAL SPECIES 20 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296.t #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000154808.a.a ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00680000100059 Hystricomorpha_a ANCESTRAL SPECIES 17 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296.t #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000154808.a.a ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00680000100059 Guinea pig MODERN SPECIES 3 MAP3K20 (ENSCPOG00000040705) CDCA7 (ENSCPOG00000011784) SP3 (ENSCPOG00000002942) OLA1 (ENSCPOG00000031110) #8 SP9 (ENSCPOG00000032651) CIR1 (ENSCPOG00000010275) #9 SCRN3 (ENSCPOG00000010281) #10 GPR155 (ENSCPOG00000010286) #11 ENSCPOG00000034131 #13 CHRNA1 (ENSCPOG00000000036) #14 ENSCPOG00000002789 #16 ATF2 (ENSCPOG00000004637) #17 ATP5MC3 (ENSCPOG00000040161) #18 LNPK (ENSCPOG00000010971) #20 EVX2 (ENSCPOG00000006711) #21 HOXD13 (ENSCPOG00000006722) #22 HOXD12 (ENSCPOG00000005496) #23 ENSCPOG00000019766 #24 HOXD10 (ENSCPOG00000011368) #25 HOXD9 (ENSCPOG00000015006) #26 HOXD8 (ENSCPOG00000015005) #27 HOXD4 (ENSCPOG00000036552) #28 HOXD3 (ENSCPOG00000034932) #29 HOXD1 (ENSCPOG00000005509) #30 MTX2 (ENSCPOG00000011099) #31 ENSCPOG00000027250 ENSCPOG00000004251 NFE2L2 (ENSCPOG00000031261) #32 AGPS (ENSCPOG00000000679) #33 ENSCPOG00000000681 #34 PDE11A (ENSCPOG00000000682) Hystricomorpha_b ANCESTRAL SPECIES 24 ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00940000162304 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00910000144296.t #13 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000154808.a.a ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000162151 ENSGT00680000100059 Degu MODERN SPECIES 106 SP9 (ENSODEG00000009569) CIR1 (ENSODEG00000009325) #9 ENSODEG00000009961 #10 GPR155 (ENSODEG00000009263) #11 ENSODEG00000008878 #13 ENSODEG00000008975 #13 ENSODEG00000019598 CHRNA1 (ENSODEG00000010458) #14 CHN1 (ENSODEG00000008560) #16 ATF2 (ENSODEG00000010947) #17 ENSODEG00000010951 #18 ENSODEG00000010385 LNPK (ENSODEG00000010046) #20 ENSODEG00000008992 EVX2 (ENSODEG00000010771) #21 HOXD13 (ENSODEG00000008793) #22 HOXD12 (ENSODEG00000008376) #23 ENSODEG00000010934 #24 HOXD10 (ENSODEG00000010382) #25 HOXD9 (ENSODEG00000008626) #26 ENSODEG00000010496 #27 HOXD4 (ENSODEG00000010297) #28 HOXD3 (ENSODEG00000009722) #29 HOXD1 (ENSODEG00000008961) #30 ENSODEG00000008879 MTX2 (ENSODEG00000008062) #31 ENSODEG00000009697 ENSODEG00000009265 NFE2L2 (ENSODEG00000010043) #32 AGPS (ENSODEG00000008272) #33 ENSODEG00000020058 #34 Long-tailed chinchilla MODERN SPECIES 110 PDLIM3 (ENSCLAG00000012689) SORBS2 (ENSCLAG00000011644) TLR3 (ENSCLAG00000012107) FAM149A (ENSCLAG00000017064) CYP4V2 (ENSCLAG00000016518) KLKB1 (ENSCLAG00000016848) F11 (ENSCLAG00000012318) MTNR1A (ENSCLAG00000015269) FAT1 (ENSCLAG00000013169) ENSCLAG00000015923 ZFP42 (ENSCLAG00000011822) TRIML2 (ENSCLAG00000011159) TRIML1 (ENSCLAG00000014494) LNPK (ENSCLAG00000015033) #20 EVX2 (ENSCLAG00000014389) #21 HOXD13 (ENSCLAG00000013095) #22 HOXD12 (ENSCLAG00000013058) #23 ENSCLAG00000012563 #24 HOXD10 (ENSCLAG00000012482) #25 HOXD9 (ENSCLAG00000012447) #26 ENSCLAG00000011108 #27 HOXD4 (ENSCLAG00000014461) #28 ENSCLAG00000013605 #29 HOXD1 (ENSCLAG00000012505) #30 MTX2 (ENSCLAG00000011598) #31 ENSCLAG00000011088 HNRNPA3 (ENSCLAG00000012855) NFE2L2 (ENSCLAG00000013122) #32 ENSCLAG00000012626 ENSCLAG00000013627 AGPS (ENSCLAG00000013279) #33 Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000046967 ENSHGLG00000040018 SP9 (ENSHGLG00000007443) CIR1 (ENSHGLG00000008097) #9 SCRN3 (ENSHGLG00000010172) #10 GPR155 (ENSHGLG00000012529) #11 ENSHGLG00000036822 #13 ENSHGLG00000039411 #13 CHRNA1 (ENSHGLG00000015432) #14 ENSHGLG00000016114 #16 ENSHGLG00000018805 #17 Atp5mc3 (ENSHGLG00000033165) #18 ENSHGLG00000040802 LNPK (ENSHGLG00000004015) #20 EVX2 (ENSHGLG00000004218) #21 HOXD13 (ENSHGLG00000050884) #22 HOXD12 (ENSHGLG00000005403) #23 HOXD11 (ENSHGLG00000034527) #24 HOXD9 (ENSHGLG00000007185) #26 HOXD10 (ENSHGLG00000033462) #25 ENSHGLG00000003577 #27 HOXD4 (ENSHGLG00000037842) #28 HOXD3 (ENSHGLG00000003761) #29 HOXD1 (ENSHGLG00000004072) #30 MTX2 (ENSHGLG00000004177) #31 ENSHGLG00000012734 ENSHGLG00000046644 ENSHGLG00000036655 HNRNPA3 (ENSHGLG00000005451) NFE2L2 (ENSHGLG00000006475) #32 AGPS (ENSHGLG00000007541) #33 Lagomorpha ANCESTRAL SPECIES 12 ENSGT01030000234646.B.a.a.b ENSGT00940000156075.a.a ENSGT00940000161352 ENSGT00940000155436 ENSGT00940000155099 ENSGT00390000000673.b #8 ENSGT00730000111135 #9 ENSGT00390000013474.a #10 ENSGT00390000004153 #11 ENSGT00940000156851 #14 ENSGT01030000234635.a.b.a.b.b.a.a #16 ENSGT00940000156582 #17 ENSGT00940000154298.a.a #18 ENSGT00390000001859 #20 ENSGT00940000161025 #21 ENSGT00940000161457 #22 ENSGT00940000159938 #23 ENSGT00940000161308 #24 ENSGT00940000158266 #25 ENSGT00940000161503 #26 ENSGT00940000161653 #27 ENSGT00940000157270 #28 ENSGT00940000160027 #29 ENSGT00940000161892 #30 ENSGT00950000182919.C #31 ENSGT00940000153147.m.a.a.a.b.a.b ENSGT00950000182892.a.a.b #32 ENSGT00940000156112 #33 ENSGT00390000010116 #34 ENSGT00940000164264 ENSGT00940000162151 Rabbit MODERN SPECIES 18 ENSOCUG00000030823 SP3 (ENSOCUG00000026678) OLA1 (ENSOCUG00000003574) #8 ENSOCUG00000037146 CIR1 (ENSOCUG00000029298) #9 SCRN3 (ENSOCUG00000011499) #10 GPR155 (ENSOCUG00000003683) #11 ENSOCUG00000036607 ENSOCUG00000005696 CHRNA1 (ENSOCUG00000024814) #14 CHN1 (ENSOCUG00000008134) #16 ATF2 (ENSOCUG00000012156) #17 ATP5MC3 (ENSOCUG00000012164) #18 LNPK (ENSOCUG00000008962) #20 EVX2 (ENSOCUG00000032776) #21 HOXD13 (ENSOCUG00000029547) #22 HOXD12 (ENSOCUG00000002412) #23 HOXD11 (ENSOCUG00000013942) #24 HOXD10 (ENSOCUG00000008964) #25 HOXD9 (ENSOCUG00000023956) #26 ENSOCUG00000035940 #27 HOXD4 (ENSOCUG00000002413) #28 HOXD3 (ENSOCUG00000014119) #29 HOXD1 (ENSOCUG00000015582) #30 MTX2 (ENSOCUG00000008760) #31 ENSOCUG00000025666 ENSOCUG00000030456 ENSOCUG00000002743 NFE2L2 (ENSOCUG00000001009) #32 AGPS (ENSOCUG00000011521) #33 ENSOCUG00000029884 #34