Mus	ANCESTRAL SPECIES	10	ENSGT00940000158836	ENSGT00390000006996	ENSGT01030000234620.a.b.a	ENSGT00730000111179.b	ENSGT00940000159098	ENSGT00940000156540	ENSGT00530000063876.b	ENSGT00940000159673	ENSGT00390000018691 #13	ENSGT00940000156774 #15	ENSGT00940000158220 #16	ENSGT00390000004660.C.a.b #17	ENSGT00940000156982 #18	ENSGT00940000153304.B #19	ENSGT00390000002319 #20	ENSGT00940000160820 #22	ENSGT00940000156487 #23	ENSGT00940000160091 #25	ENSGT00390000010439 #26	ENSGT00940000154832.n #27	ENSGT00940000155226.q.b #28	ENSGT00940000155226.q.a #29	ENSGT00940000156899 #30	ENSGT00940000158583 #31	ENSGT00940000155077.e.a #32	ENSGT00390000001277 #33	ENSGT00390000018097.i #34	ENSGT00390000002032 #35	ENSGT00950000182998.A #36	ENSGT00940000156452 #37	ENSGT00950000183181.B.a
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000158836	ENSGT00390000006996	ENSGT01030000234620.a.b.a	ENSGT00730000111179.b	ENSGT00940000159098	ENSGT00940000156540	ENSGT00530000063876.b	ENSGT00940000159673	ENSGT00390000018691 #13	ENSGT00940000156774 #15	ENSGT00940000158220 #16	ENSGT00390000004660.C.a.b #17	ENSGT00940000156982 #18	ENSGT00940000153304.B #19	ENSGT00390000002319 #20	ENSGT00940000160820 #22	ENSGT00940000156487 #23	ENSGT00940000160091 #25	ENSGT00390000010439 #26	ENSGT00940000154832.n #27	ENSGT00940000155226.q.b #28	ENSGT00940000155226.q.a #29	ENSGT00940000156899 #30	ENSGT00940000158583 #31	ENSGT00940000155077.e.a #32	ENSGT00390000001277 #33	ENSGT00390000018097.i #34	ENSGT00390000002032 #35	ENSGT00950000182998.A #36	ENSGT00940000156452 #37	ENSGT00950000183181.B.a
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000158836	ENSGT00390000006996	ENSGT01030000234620.a.b.a	ENSGT00730000111179.b	ENSGT00940000159098	ENSGT00940000156540	ENSGT00530000063876.b	ENSGT00940000159673	ENSGT00390000018691 #13	ENSGT00940000156774 #15	ENSGT00940000158220 #16	ENSGT00390000004660.C.a.b #17	ENSGT00940000156982 #18	ENSGT00940000153304.B #19	ENSGT00390000002319 #20	ENSGT00940000160820 #22	ENSGT00940000156487 #23	ENSGT00940000160091 #25	ENSGT00390000010439 #26	ENSGT00940000154832.n #27	ENSGT00940000155226.q.b #28	ENSGT00940000155226.q.a #29	ENSGT00940000156899 #30	ENSGT00940000158583 #31	ENSGT00940000155077.e.a #32	ENSGT00390000001277 #33	ENSGT00390000018097.i #34	ENSGT00390000002032 #35	ENSGT00950000182998.A #36	ENSGT00940000156452 #37	ENSGT00950000183181.B.a
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000158836	ENSGT00390000006996	ENSGT01030000234620.a.b.a	ENSGT00730000111179.b	ENSGT00940000159098	ENSGT00940000156540	ENSGT00530000063876.b	ENSGT00940000159673	ENSGT00390000018691 #13	ENSGT00940000156774 #15	ENSGT00940000158220 #16	ENSGT00390000004660.C.a.b #17	ENSGT00940000156982 #18	ENSGT00940000153304.B #19	ENSGT00390000002319 #20	ENSGT00940000160820 #22	ENSGT00940000156487 #23	ENSGT00940000160091 #25	ENSGT00390000010439 #26	ENSGT00940000154832.n #27	ENSGT00940000155226.q.b #28	ENSGT00940000155226.q.a #29	ENSGT00940000156899 #30	ENSGT00940000158583 #31	ENSGT00940000155077.e.a #32	ENSGT00390000001277 #33	ENSGT00390000018097.i #34	ENSGT00390000002032 #35	ENSGT00950000182998.A #36	ENSGT00940000156452 #37	ENSGT00950000183181.B.a
Steppe mouse	MODERN SPECIES	3155							Snapc1 (ENSMSIG00000024569) #13	ENSMSIG00000024606 #14	Hif1a (ENSMSIG00000024611) #15	Prkch (ENSMSIG00000024638) #16	Tmem30b (ENSMSIG00000024663) #17	Slc38a6 (ENSMSIG00000024679) #18	Trmt5 (ENSMSIG00000024766) #19	Mnat1 (ENSMSIG00000024773) #20	ENSMSIG00000024789 #21	Six4 (ENSMSIG00000024804) #22	Six1 (ENSMSIG00000024807) #23	ENSMSIG00000024815 #24	Six6 (ENSMSIG00000024826) #25	4930447C04Rik (ENSMSIG00000024836) #26	ENSMSIG00000024898 #27	Dhrs7 (ENSMSIG00000024915) #28	Gm4756 (ENSMSIG00000024922) #29	Pcnx4 (ENSMSIG00000024955) #30	Lrrc9 (ENSMSIG00000024967) #31	Rtn1 (ENSMSIG00000025045) #32	Ccdc175 (ENSMSIG00000025076) #33	Jkamp (ENSMSIG00000025125) #34	L3hypdh (ENSMSIG00000025161) #35	Gpr135 (ENSMSIG00000025173) #36	Daam1 (ENSMSIG00000025185) #37
spretus	MODERN SPECIES	3	Wdr89 (MGP_SPRETEiJ_G0018703)	Ppp2r5e (MGP_SPRETEiJ_G0018702)	Gphb5 (MGP_SPRETEiJ_G0018701)	Rhoj (MGP_SPRETEiJ_G0018700)	Kcnh5 (MGP_SPRETEiJ_G0018699)	MGP_SPRETEiJ_G0018698	MGP_SPRETEiJ_G0018697	Snapc1 (MGP_SPRETEiJ_G0018696) #13	Hif1a (MGP_SPRETEiJ_G0018695) #15	Prkch (MGP_SPRETEiJ_G0018694) #16	Tmem30b (MGP_SPRETEiJ_G0018693) #17	MGP_SPRETEiJ_G0018692	Slc38a6 (MGP_SPRETEiJ_G0018691) #18	Trmt5 (MGP_SPRETEiJ_G0018690) #19	Mnat1 (MGP_SPRETEiJ_G0018689) #20	Six4 (MGP_SPRETEiJ_G0018688) #22	Six1 (MGP_SPRETEiJ_G0018687) #23	Six6 (MGP_SPRETEiJ_G0018686) #25	4930447C04Rik (MGP_SPRETEiJ_G0018685) #26	MGP_SPRETEiJ_G0018684 #27	Dhrs7 (MGP_SPRETEiJ_G0018683) #28	MGP_SPRETEiJ_G0018682 #29	Pcnx4 (MGP_SPRETEiJ_G0018681) #30	Lrrc9 (MGP_SPRETEiJ_G0018680) #31	Rtn1 (MGP_SPRETEiJ_G0018679) #32	Ccdc175 (MGP_SPRETEiJ_G0018678) #33	Jkamp (MGP_SPRETEiJ_G0018677) #34	L3hypdh (MGP_SPRETEiJ_G0018676) #35	Gpr135 (MGP_SPRETEiJ_G0018675) #36	Daam1 (MGP_SPRETEiJ_G0018674) #37	Dact1 (MGP_SPRETEiJ_G0018673)
Mouse	MODERN SPECIES	3	Sgpp1 (ENSMUSG00000021054)	Rplp2-ps1 (ENSMUSG00000118552)	Wdr89 (ENSMUSG00000045690)	Ppp2r5e (ENSMUSG00000021051)	Gphb5 (ENSMUSG00000048982)	Rhoj (ENSMUSG00000046768)	Kcnh5 (ENSMUSG00000034402)	Syt16 (ENSMUSG00000044912)	Snapc1 (ENSMUSG00000021113) #13	Hif1a (ENSMUSG00000021109) #15	Prkch (ENSMUSG00000021108) #16	Tmem30b (ENSMUSG00000034435) #17	Slc38a6 (ENSMUSG00000044712) #18	Trmt5 (ENSMUSG00000034442) #19	Mnat1 (ENSMUSG00000021103) #20	Six4 (ENSMUSG00000034460) #22	Six1 (ENSMUSG00000051367) #23	Six6 (ENSMUSG00000021099) #25	4930447C04Rik (ENSMUSG00000021098) #26	Ppm1a (ENSMUSG00000021096) #27	Dhrs7 (ENSMUSG00000021094) #28	Gm4756 (ENSMUSG00000109482) #29	Pcnx4 (ENSMUSG00000034501) #30	Lrrc9 (ENSMUSG00000021090) #31	Rtn1 (ENSMUSG00000021087) #32	Ccdc175 (ENSMUSG00000021086) #33	Jkamp (ENSMUSG00000005078) #34	L3hypdh (ENSMUSG00000019718) #35	Gpr135 (ENSMUSG00000043398) #36	Daam1 (ENSMUSG00000034574) #37	Dact1 (ENSMUSG00000044548)
Ryukyu mouse	MODERN SPECIES	3	Wdr89 (MGP_CAROLIEiJ_G0017856)	Ppp2r5e (MGP_CAROLIEiJ_G0017855)	Gphb5 (MGP_CAROLIEiJ_G0017854)	Rhoj (MGP_CAROLIEiJ_G0017853)	Kcnh5 (MGP_CAROLIEiJ_G0017852)	MGP_CAROLIEiJ_G0017851	MGP_CAROLIEiJ_G0017850	Snapc1 (MGP_CAROLIEiJ_G0017849) #13	Hif1a (MGP_CAROLIEiJ_G0017848) #15	Prkch (MGP_CAROLIEiJ_G0017847) #16	Tmem30b (MGP_CAROLIEiJ_G0017846) #17	MGP_CAROLIEiJ_G0017845	Slc38a6 (MGP_CAROLIEiJ_G0017844) #18	Trmt5 (MGP_CAROLIEiJ_G0017843) #19	Mnat1 (MGP_CAROLIEiJ_G0017842) #20	Six4 (MGP_CAROLIEiJ_G0017841) #22	Six1 (MGP_CAROLIEiJ_G0017840) #23	Six6 (MGP_CAROLIEiJ_G0017839) #25	4930447C04Rik (MGP_CAROLIEiJ_G0017838) #26	Dhrs7 (MGP_CAROLIEiJ_G0017837) #28	Pcnx4 (MGP_CAROLIEiJ_G0017836) #30	Lrrc9 (MGP_CAROLIEiJ_G0017835) #31	Rtn1 (MGP_CAROLIEiJ_G0017834) #32	MGP_CAROLIEiJ_G0017833 #33	Jkamp (MGP_CAROLIEiJ_G0017832) #34	L3hypdh (MGP_CAROLIEiJ_G0017831) #35	Gpr135 (MGP_CAROLIEiJ_G0017830) #36	Daam1 (MGP_CAROLIEiJ_G0017829) #37	Dact1 (MGP_CAROLIEiJ_G0017828)	2700049A03Rik (MGP_CAROLIEiJ_G0017827)	MGP_CAROLIEiJ_G0017826
Shrew mouse	MODERN SPECIES	20	Sgpp1 (MGP_PahariEiJ_G0029614)	Wdr89 (MGP_PahariEiJ_G0029613)	Ppp2r5e (MGP_PahariEiJ_G0029612)	Gphb5 (MGP_PahariEiJ_G0029611)	Rhoj (MGP_PahariEiJ_G0029610)	Kcnh5 (MGP_PahariEiJ_G0029609)	MGP_PahariEiJ_G0029608	MGP_PahariEiJ_G0029607	Snapc1 (MGP_PahariEiJ_G0029606) #13	Hif1a (MGP_PahariEiJ_G0029605) #15	Prkch (MGP_PahariEiJ_G0029604) #16	Tmem30b (MGP_PahariEiJ_G0029603) #17	Slc38a6 (MGP_PahariEiJ_G0029602) #18	Trmt5 (MGP_PahariEiJ_G0029601) #19	Mnat1 (MGP_PahariEiJ_G0029600) #20	Six4 (MGP_PahariEiJ_G0029599) #22	Six1 (MGP_PahariEiJ_G0029598) #23	Six6 (MGP_PahariEiJ_G0029597) #25	4930447C04Rik (MGP_PahariEiJ_G0029596) #26	Ppm1a (MGP_PahariEiJ_G0029595) #27	MGP_PahariEiJ_G0029594	MGP_PahariEiJ_G0029593 #29	Pcnx4 (MGP_PahariEiJ_G0029592) #30	Lrrc9 (MGP_PahariEiJ_G0029591) #31	Rtn1 (MGP_PahariEiJ_G0029590) #32	Ccdc175 (MGP_PahariEiJ_G0029589) #33	Jkamp (MGP_PahariEiJ_G0029588) #34	L3hypdh (MGP_PahariEiJ_G0029587) #35	Gpr135 (MGP_PahariEiJ_G0029586) #36	Daam1 (MGP_PahariEiJ_G0029585) #37	Dact1 (MGP_PahariEiJ_G0029584)