Euteleostomi ANCESTRAL SPECIES ENSGT00940000178006 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 ENSGT00940000160654 ENSGT00940000157580 ENSGT00390000005261 ENSGT00500000044920 ENSGT00940000156710 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Sarcopterygii ANCESTRAL SPECIES 36 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000170353 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000164372 ENSGT00940000164592 ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Tetrapoda ANCESTRAL SPECIES ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000164372 ENSGT00940000164592 ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Amniota ANCESTRAL SPECIES ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000164372 ENSGT00940000164592 ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Mammalia ANCESTRAL SPECIES ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000164372 ENSGT00940000164592 ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Theria ANCESTRAL SPECIES 1 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Eutheria ANCESTRAL SPECIES 17 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Boreoeutheria ANCESTRAL SPECIES 21 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Euarchontoglires ANCESTRAL SPECIES 21 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Primates ANCESTRAL SPECIES 29 ENSGT00940000159635 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Haplorrhini ANCESTRAL SPECIES 43 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.b.b ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Simiiformes ANCESTRAL SPECIES 22 ENSGT00940000159635 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Catarrhini ANCESTRAL SPECIES 21 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00910000148031 ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153889.e.b.a.d.a #16 ENSGT00910000147093 #17 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Cercopithecidae ANCESTRAL SPECIES 23 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00910000148031 ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153889.e.b.a.d.a #16 ENSGT00910000147093 #17 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000165378.d ENSGT00940000157104 Rhinopithecus ANCESTRAL SPECIES 56 ENSGT00940000153654 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00910000148031 ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00910000147174 ENSGT00950000183026.A.b #13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.i #15 ENSGT00940000153889.e.b.a.d.a #16 ENSGT00910000147093 #17 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000165378.d ENSGT00940000157104 Golden snub-nosed monkey MODERN SPECIES 603 ENSRROG00000029261 #13 SLC46A3 (ENSRROG00000013197) #14 ENSRROG00000035051 #15 ENSRROG00000028953 #16 ENSRROG00000036924 #17 ENSRROG00000044673 #18 FLT1 (ENSRROG00000044082) #19 PAN3 (ENSRROG00000044835) #20 ENSRROG00000038089 #21 FLT3 (ENSRROG00000032511) #22 URAD (ENSRROG00000032393) #23 CDX2 (ENSRROG00000036416) #24 PDX1 (ENSRROG00000038796) #25 GSX1 (ENSRROG00000032356) #26 Black snub-nosed monkey MODERN SPECIES 1391 UBL3 (ENSRBIG00000032584) ENSRBIG00000024318 SLC7A1 (ENSRBIG00000030519) MTUS2 (ENSRBIG00000042717) ##13 ENSRBIG00000043698 SLC46A3 (ENSRBIG00000039296) #14 ENSRBIG00000028141 #15 ENSRBIG00000040184 #16 ENSRBIG00000017410 #17 ENSRBIG00000034378 #18 FLT1 (ENSRBIG00000036952) #19 PAN3 (ENSRBIG00000036981) #20 FLT3 (ENSRBIG00000042399) #22 ENSRBIG00000030643 CDX2 (ENSRBIG00000038667) #24 PDX1 (ENSRBIG00000039353) #25 GSX1 (ENSRBIG00000032182) #26 ENSRBIG00000036378 LNX2 (ENSRBIG00000028850) MTIF3 (ENSRBIG00000027271) GTF3A (ENSRBIG00000044964) RASL11A (ENSRBIG00000043749) ENSRBIG00000036802 ENSRBIG00000041212 GPR12 (ENSRBIG00000001744) WASF3 (ENSRBIG00000033396) CDK8 (ENSRBIG00000040781) ENSRBIG00000044340 Cercopithecinae ANCESTRAL SPECIES 20 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00940000155828.o.a ENSGT00390000004952.b ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000165378.d ENSGT00940000157104 Cercopithecinae_a ANCESTRAL SPECIES 19 ENSGT00940000156630 ENSGT00940000155828.o.a ENSGT00390000004952.b ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153783.a ENSGT00910000147093 #17 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00910000147903 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Cercopithecinae_b ANCESTRAL SPECIES 28 ENSGT00940000156630 ENSGT00940000155828.o.a ENSGT00390000004952.b ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153783.a ENSGT00910000147093 #17 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00910000147903 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000165378.d Cercopithecinae_d ANCESTRAL SPECIES 93 ENSGT00910000148031 ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153783.a ENSGT00910000147093 #17 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00910000147903 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000165378.d Drill MODERN SPECIES 1324 ENSMLEG00000006158 #13 SLC46A3 (ENSMLEG00000044293) #14 POMP (ENSMLEG00000039576) #15 ENSMLEG00000042438 ENSMLEG00000036390 #17 ENSMLEG00000038076 #18 FLT1 (ENSMLEG00000034284) #19 ENSMLEG00000003098 #21 PAN3 (ENSMLEG00000008619) #20 FLT3 (ENSMLEG00000037398) #22 CDX2 (ENSMLEG00000037430) #24 PDX1 (ENSMLEG00000032316) #25 ENSMLEG00000041805 ENSMLEG00000041048 LNX2 (ENSMLEG00000039062) MTIF3 (ENSMLEG00000039110) GTF3A (ENSMLEG00000039703) RASL11A (ENSMLEG00000036089) ENSMLEG00000024280 ENSMLEG00000033598 GPR12 (ENSMLEG00000002545) WASF3 (ENSMLEG00000040168) CDK8 (ENSMLEG00000040071) RNF6 (ENSMLEG00000038569) SHISA2 (ENSMLEG00000034103) Sooty mangabey MODERN SPECIES 255 ENSCATG00000034802 SLC7A1 (ENSCATG00000025899) ENSCATG00000037549 MTUS2 (ENSCATG00000041831) ##13 SLC46A3 (ENSCATG00000021488) #14 POMP (ENSCATG00000037462) #15 ENSCATG00000033485 ENSCATG00000028829 #17 ENSCATG00000024438 #18 FLT1 (ENSCATG00000034541) #19 PAN3 (ENSCATG00000030893) #20 ENSCATG00000032726 FLT3 (ENSCATG00000014529) #22 URAD (ENSCATG00000007826) #23 CDX2 (ENSCATG00000007363) #24 PDX1 (ENSCATG00000035793) #25 GSX1 (ENSCATG00000028004) #26 ENSCATG00000002488 ENSCATG00000030710 LNX2 (ENSCATG00000035354) MTIF3 (ENSCATG00000007775) GTF3A (ENSCATG00000032361) RASL11A (ENSCATG00000033838) ENSCATG00000032591 ENSCATG00000038452 ENSCATG00000018180 GPR12 (ENSCATG00000018217) WASF3 (ENSCATG00000037570) Olive baboon MODERN SPECIES 6 TEX26 (ENSPANG00000012755) MEDAG (ENSPANG00000021857) ALOX5AP (ENSPANG00000020217) USPL1 (ENSPANG00000005488) HMGB1 (ENSPANG00000007200) UBE2L5 (ENSPANG00000043221) KATNAL1 (ENSPANG00000023364) UBL3 (ENSPANG00000008471) SLC7A1 (ENSPANG00000012138) MTUS2 (ENSPANG00000013682) ##13 SLC46A3 (ENSPANG00000020218) #14 POMP (ENSPANG00000046275) #15 ENSPANG00000044787 FLT1 (ENSPANG00000009892) #19 PAN3 (ENSPANG00000001988) #20 FLT3 (ENSPANG00000009315) #22 URAD (ENSPANG00000014018) #23 CDX2 (ENSPANG00000050183) #24 PDX1 (ENSPANG00000012683) #25 ENSPANG00000047094 GSX1 (ENSPANG00000017129) #26 ENSPANG00000038544 ENSPANG00000020259 LNX2 (ENSPANG00000012983) MTIF3 (ENSPANG00000005047) GTF3A (ENSPANG00000012593) RASL11A (ENSPANG00000044196) ENSPANG00000011984 USP12 (ENSPANG00000011533) GPR12 (ENSPANG00000003061) WASF3 (ENSPANG00000009058) Macaca ANCESTRAL SPECIES 19 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.b ENSGT00940000155828.o.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153783.a ENSGT00910000147093 #17 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00910000147903 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Macaca_a ANCESTRAL SPECIES 19 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.b ENSGT00940000155828.o.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00910000147093 #17 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT01100000263493.a.b.a.a.b.a.b.b ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.a.b.a ENSGT00940000153284.a.h.i.a ENSGT00940000164709.a.b.b.b.b.a ENSGT01060000248564.b.a.b.a Crab-eating macaque MODERN SPECIES 8 USPL1 (ENSMFAG00000032370) ENSMFAG00000030905 UBE2L5 (ENSMFAG00000045697) ENSMFAG00000053527 KATNAL1 (ENSMFAG00000053013) UBL3 (ENSMFAG00000044955) SLC7A1 (ENSMFAG00000043457) MTUS2 (ENSMFAG00000032200) ##13 SLC46A3 (ENSMFAG00000030072) #14 POMP (ENSMFAG00000025369) #15 ENSMFAG00000039222 #17 FLT1 (ENSMFAG00000035718) #19 PAN3 (ENSMFAG00000025538) #20 ENSMFAG00000063510 ENSMFAG00000052223 FLT3 (ENSMFAG00000044854) #22 URAD (ENSMFAG00000043442) #23 CDX2 (ENSMFAG00000051158) #24 PDX1 (ENSMFAG00000063371) #25 GSX1 (ENSMFAG00000037158) #26 ENSMFAG00000045264 LNX2 (ENSMFAG00000045245) ENSMFAG00000050995 MTIF3 (ENSMFAG00000045045) GTF3A (ENSMFAG00000044837) RASL11A (ENSMFAG00000044628) ENSMFAG00000053340 ENSMFAG00000062305 USP12 (ENSMFAG00000031734) ENSMFAG00000050832 ENSMFAG00000058696 Rhesus MODERN SPECIES 8 ALOX5AP (ENSMMUG00000005572) USPL1 (ENSMMUG00000007597) ENSMMUG00000052770 HMGB1 (ENSMMUG00000046615) ENSMMUG00000058466 UBE2L5 (ENSMMUG00000008940) KATNAL1 (ENSMMUG00000004922) UBL3 (ENSMMUG00000003771) SLC7A1 (ENSMMUG00000008661) MTUS2 (ENSMMUG00000008658) ##13 SLC46A3 (ENSMMUG00000013721) #14 POMP (ENSMMUG00000058998) #15 ENSMMUG00000063649 #17 FLT1 (ENSMMUG00000021538) #19 PAN3 (ENSMMUG00000022522) #20 FLT3 (ENSMMUG00000016139) #22 URAD (ENSMMUG00000016138) #23 CDX2 (ENSMMUG00000052070) #24 PDX1 (ENSMMUG00000064615) #25 GSX1 (ENSMMUG00000004507) #26 POLR1D (ENSMMUG00000020386) LNX2 (ENSMMUG00000058786) ENSMMUG00000059867 MTIF3 (ENSMMUG00000009030) GTF3A (ENSMMUG00000009029) RASL11A (ENSMMUG00000049650) ENSMMUG00000058755 ENSMMUG00000054994 USP12 (ENSMMUG00000021425) ENSMMUG00000050226 ENSMMUG00000057481 Pig-tailed macaque MODERN SPECIES 165 UXS1 (ENSMNEG00000040004) ENSMNEG00000044732 ENSMNEG00000019179 ST6GAL2 (ENSMNEG00000036708) ENSMNEG00000022050 SLC5A7 (ENSMNEG00000039266) SLC7A1 (ENSMNEG00000044453) MTUS2 (ENSMNEG00000039238) ##13 SLC46A3 (ENSMNEG00000038996) #14 POMP (ENSMNEG00000031404) #15 ENSMNEG00000043904 ENSMNEG00000028177 #17 FLT1 (ENSMNEG00000032149) #19 PAN3 (ENSMNEG00000032817) #20 ENSMNEG00000043801 FLT3 (ENSMNEG00000032442) #22 URAD (ENSMNEG00000045421) #23 CDX2 (ENSMNEG00000043440) #24 PDX1 (ENSMNEG00000032095) #25 GSX1 (ENSMNEG00000032682) #26 ENSMNEG00000008630 ENSMNEG00000034652 LNX2 (ENSMNEG00000040860) MTIF3 (ENSMNEG00000032443) GTF3A (ENSMNEG00000043473) RASL11A (ENSMNEG00000033345) ENSMNEG00000034115 ENSMNEG00000039505 GPR12 (ENSMNEG00000010974) WASF3 (ENSMNEG00000028711) CDK8 (ENSMNEG00000031167) Vervet Monkey MODERN SPECIES 22 RXFP2 (ENSCSAG00000017936) B3GLCT (ENSCSAG00000017941) HSPH1 (ENSCSAG00000017943) TEX26 (ENSCSAG00000017946) MEDAG (ENSCSAG00000017948) ALOX5AP (ENSCSAG00000017950) USPL1 (ENSCSAG00000017953) KATNAL1 (ENSCSAG00000017958) UBL3 (ENSCSAG00000017959) SLC7A1 (ENSCSAG00000017961) MTUS2 (ENSCSAG00000017964) ##13 SLC46A3 (ENSCSAG00000017966) #14 POMP (ENSCSAG00000017967) #15 FLT1 (ENSCSAG00000017969) #19 PAN3 (ENSCSAG00000017971) #20 FLT3 (ENSCSAG00000017973) #22 URAD (ENSCSAG00000017975) #23 CDX2 (ENSCSAG00000017976) #24 PDX1 (ENSCSAG00000017977) #25 GSX1 (ENSCSAG00000017979) #26 ENSCSAG00000017980 LNX2 (ENSCSAG00000017981) MTIF3 (ENSCSAG00000017982) GTF3A (ENSCSAG00000017983) RASL11A (ENSCSAG00000017985) ENSCSAG00000017986 GPR12 (ENSCSAG00000018592) WASF3 (ENSCSAG00000017987) CDK8 (ENSCSAG00000017989) RNF6 (ENSCSAG00000017991) SHISA2 (ENSCSAG00000017992) Hominoidea ANCESTRAL SPECIES 21 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00910000148031 ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153889.e.b.a.d.a #16 ENSGT00910000147093 #17 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Hominidae ANCESTRAL SPECIES 23 ENSGT00940000155828.o.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00910000148031 ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153889.f ##16 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00440000038159.p.b ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Homo/Pan/Gorilla group ANCESTRAL SPECIES 23 ENSGT00950000183203.d.h ENSGT00940000155828.o.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00910000148031 ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153889.f ##16 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Gorilla MODERN SPECIES 4 MEDAG (ENSGGOG00000009867) ENSGGOG00000013859 USPL1 (ENSGGOG00000004673) HMGB1 (ENSGGOG00000026764) UBE2L5 (ENSGGOG00000006857) ENSGGOG00000024714 KATNAL1 (ENSGGOG00000026875) UBL3 (ENSGGOG00000023146) ENSGGOG00000042729 SLC46A3 (ENSGGOG00000014254) #14 POMP (ENSGGOG00000015316) #15 ENSGGOG00000036780 ##16 ENSGGOG00000036812 #18 FLT1 (ENSGGOG00000008750) #19 PAN3 (ENSGGOG00000016079) #20 FLT3 (ENSGGOG00000000882) #22 URAD (ENSGGOG00000005489) #23 CDX2 (ENSGGOG00000005487) #24 PDX1 (ENSGGOG00000002569) #25 GSX1 (ENSGGOG00000005011) #26 POLR1D (ENSGGOG00000004235) LNX2 (ENSGGOG00000016167) MTIF3 (ENSGGOG00000041079) GTF3A (ENSGGOG00000008407) RASL11A (ENSGGOG00000008785) ENSGGOG00000003002 ENSGGOG00000011358 GPR12 (ENSGGOG00000000849) WASF3 (ENSGGOG00000012518) CDK8 (ENSGGOG00000006569) RNF6 (ENSGGOG00000006568) Homo/Pan group ANCESTRAL SPECIES 22 ENSGT00950000183203.d.h ENSGT00940000155828.o.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00910000148031 ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153889.f ##16 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Pan ANCESTRAL SPECIES 22 ENSGT00940000155828.o.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00910000148031 ENSGT00940000155349 ENSGT00910000147174 ENSGT00950000183026.B ##13 ENSGT00930000151026.f ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000153889.f ##16 ENSGT00910000146937 #18 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00390000015470.z.b ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160.x ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Chimpanzee MODERN SPECIES 4 ENSPTRG00000044243 KATNAL1 (ENSPTRG00000005753) UBL3 (ENSPTRG00000005751) ENSPTRG00000049804 SLC7A1 (ENSPTRG00000005750) ENSPTRG00000046056 MTUS2 (ENSPTRG00000005747) ##13 ENSPTRG00000045489 SLC46A3 (ENSPTRG00000005746) #14 POMP (ENSPTRG00000005745) #15 ENSPTRG00000046663 ##16 ENSPTRG00000045890 #18 FLT1 (ENSPTRG00000005743) #19 PAN3 (ENSPTRG00000005742) #20 ENSPTRG00000046829 FLT3 (ENSPTRG00000005740) #22 URAD (ENSPTRG00000005739) #23 CDX2 (ENSPTRG00000043330) #24 ENSPTRG00000005737 PDX1 (ENSPTRG00000005736) #25 GSX1 (ENSPTRG00000005735) #26 POLR1D (ENSPTRG00000005734) LNX2 (ENSPTRG00000005733) MTIF3 (ENSPTRG00000005732) GTF3A (ENSPTRG00000005730) RASL11A (ENSPTRG00000005729) RPL21 (ENSPTRG00000005728) USP12 (ENSPTRG00000005727) GPR12 (ENSPTRG00000046989) WASF3 (ENSPTRG00000005725) CDK8 (ENSPTRG00000005724) Bonobo MODERN SPECIES 4 UBE2L5 (ENSPPAG00000032233) ENSPPAG00000037440 KATNAL1 (ENSPPAG00000033530) UBL3 (ENSPPAG00000027496) ENSPPAG00000015303 SLC7A1 (ENSPPAG00000037016) ENSPPAG00000034238 MTUS2 (ENSPPAG00000032687) ##13 ENSPPAG00000027903 SLC46A3 (ENSPPAG00000035795) #14 POMP (ENSPPAG00000036286) #15 ENSPPAG00000027416 #18 ENSPPAG00000033250 #19 ENSPPAG00000030264 PAN3 (ENSPPAG00000027826) #20 FLT3 (ENSPPAG00000015701) #22 CDX2 (ENSPPAG00000032963) #24 ENSPPAG00000032440 ENSPPAG00000032720 #25 GSX1 (ENSPPAG00000032556) #26 ENSPPAG00000028138 LNX2 (ENSPPAG00000027444) MTIF3 (ENSPPAG00000027304) GTF3A (ENSPPAG00000034725) RASL11A (ENSPPAG00000027996) ENSPPAG00000042860 ENSPPAG00000007246 GPR12 (ENSPPAG00000007707) WASF3 (ENSPPAG00000035699) CDK8 (ENSPPAG00000035126) RNF6 (ENSPPAG00000035870) Human MODERN SPECIES 4 HSPH1 (ENSG00000120694) TEX26 (ENSG00000175664) MEDAG (ENSG00000102802) ALOX5AP (ENSG00000132965) USPL1 (ENSG00000132952) HMGB1 (ENSG00000189403) UBE2L5 (ENSG00000236444) KATNAL1 (ENSG00000102781) UBL3 (ENSG00000122042) SLC7A1 (ENSG00000139514) MTUS2 (ENSG00000132938) ##13 SLC46A3 (ENSG00000139508) #14 POMP (ENSG00000132963) #15 FLT1 (ENSG00000102755) #19 PAN3 (ENSG00000152520) #20 FLT3 (ENSG00000122025) #22 URAD (ENSG00000183463) #23 CDX2 (ENSG00000165556) #24 PDX1 (ENSG00000139515) #25 GSX1 (ENSG00000169840) #26 POLR1D (ENSG00000186184) LNX2 (ENSG00000139517) MTIF3 (ENSG00000122033) GTF3A (ENSG00000122034) RASL11A (ENSG00000122035) RPL21 (ENSG00000122026) USP12 (ENSG00000152484) GPR12 (ENSG00000132975) WASF3 (ENSG00000132970) CDK8 (ENSG00000132964) RNF6 (ENSG00000127870) Orangutan MODERN SPECIES 4 ENSPPYG00000030447 UBE2L5 (ENSPPYG00000005254) ENSPPYG00000031030 KATNAL1 (ENSPPYG00000005253) UBL3 (ENSPPYG00000037129) ENSPPYG00000034870 SLC7A1 (ENSPPYG00000005250) MTUS2 (ENSPPYG00000005249) ##13 SLC46A3 (ENSPPYG00000005248) #14 POMP (ENSPPYG00000005247) #15 ENSPPYG00000038952 ##16 ENSPPYG00000034417 #18 FLT1 (ENSPPYG00000005246) #19 PAN3 (ENSPPYG00000005245) #20 ENSPPYG00000040072 FLT3 (ENSPPYG00000005244) #22 URAD (ENSPPYG00000005243) #23 CDX2 (ENSPPYG00000005242) #24 ENSPPYG00000005241 PDX1 (ENSPPYG00000005240) #25 GSX1 (ENSPPYG00000005239) #26 ENSPPYG00000005238 LNX2 (ENSPPYG00000005237) MTIF3 (ENSPPYG00000005236) GTF3A (ENSPPYG00000005235) RASL11A (ENSPPYG00000005234) RPL21 (ENSPPYG00000005233) USP12 (ENSPPYG00000005232) GPR12 (ENSPPYG00000005231) WASF3 (ENSPPYG00000005230) CDK8 (ENSPPYG00000005229) Gibbon MODERN SPECIES 24 KATNAL1 (ENSNLEG00000000679) UBL3 (ENSNLEG00000000660) SLC7A1 (ENSNLEG00000000622) ENSNLEG00000035615 ##13 ENSNLEG00000033304 ENSNLEG00000000618 ##13 SLC46A3 (ENSNLEG00000000599) #14 POMP (ENSNLEG00000000572) #15 ENSNLEG00000000571 #16 ENSNLEG00000033802 #17 ENSNLEG00000030098 #18 FLT1 (ENSNLEG00000000456) #19 PAN3 (ENSNLEG00000000388) #20 ENSNLEG00000029210 #21 ENSNLEG00000035718 FLT3 (ENSNLEG00000000372) #22 URAD (ENSNLEG00000000369) #23 CDX2 (ENSNLEG00000000365) #24 PDX1 (ENSNLEG00000000362) #25 GSX1 (ENSNLEG00000000360) #26 ENSNLEG00000000358 LNX2 (ENSNLEG00000000345) MTIF3 (ENSNLEG00000000343) GTF3A (ENSNLEG00000000331) RASL11A (ENSNLEG00000000329) ENSNLEG00000000327 ENSNLEG00000000323 ATP2B4 (ENSNLEG00000018117) ENSNLEG00000033057 OPTC (ENSNLEG00000018116) PRELP (ENSNLEG00000018115) Platyrrhini ANCESTRAL SPECIES 23 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.b.b ENSGT00950000183120.e.b.b.b ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00950000182965.a.b.b.b.g.a ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Cebidae ANCESTRAL SPECIES 26 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.b.b ENSGT00950000183120.e.b.b.b ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00950000182965.a.b.b.b.g.a ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Cebidae_a ANCESTRAL SPECIES 28 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.b.b ENSGT00940000156630 ENSGT00390000011417.k.d ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00950000182965.a.b.b.b.g.a ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a ENSGT00940000153284.a.h.j ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Bolivian squirrel monkey MODERN SPECIES 42 ENSSBOG00000024496 ENSSBOG00000023208 KATNAL1 (ENSSBOG00000009792) ENSSBOG00000020013 UBL3 (ENSSBOG00000009211) ENSSBOG00000028866 SLC7A1 (ENSSBOG00000020061) MTUS2 (ENSSBOG00000026505) ##13 ENSSBOG00000019071 SLC46A3 (ENSSBOG00000025396) #14 POMP (ENSSBOG00000032229) #15 FLT1 (ENSSBOG00000015766) #19 ENSSBOG00000020899 PAN3 (ENSSBOG00000020298) #20 ENSSBOG00000032374 FLT3 (ENSSBOG00000026666) #22 ENSSBOG00000020835 ENSSBOG00000027743 CDX2 (ENSSBOG00000031573) #24 PDX1 (ENSSBOG00000031436) #25 GSX1 (ENSSBOG00000026103) #26 ENSSBOG00000015416 ENSSBOG00000028482 ENSSBOG00000014497 LNX2 (ENSSBOG00000025148) MTIF3 (ENSSBOG00000030469) GTF3A (ENSSBOG00000002098) RASL11A (ENSSBOG00000025363) ENSSBOG00000031441 ENSSBOG00000023626 GPR12 (ENSSBOG00000015914) Capuchin MODERN SPECIES 103 ENSCCAG00000022504 REPS2 (ENSCCAG00000024409) ENSCCAG00000032047 ENSCCAG00000028011 KATNA1 (ENSCCAG00000029984) UBL3 (ENSCCAG00000021780) CIAPIN1 (ENSCCAG00000020425) SLC7A1 (ENSCCAG00000000822) MTUS2 (ENSCCAG00000025313) ##13 SLC46A3 (ENSCCAG00000025858) #14 POMP (ENSCCAG00000027871) #15 FLT1 (ENSCCAG00000035784) #19 ENSCCAG00000000468 PAN3 (ENSCCAG00000021218) #20 ENSCCAG00000027785 FLT3 (ENSCCAG00000022587) #22 ENSCCAG00000029430 CDX2 (ENSCCAG00000025801) #24 PDX1 (ENSCCAG00000036295) #25 GSX1 (ENSCCAG00000025929) #26 ENSCCAG00000021349 LNX2 (ENSCCAG00000020368) ENSCCAG00000026568 MTIF3 (ENSCCAG00000036048) GTF3A (ENSCCAG00000029730) RASL11A (ENSCCAG00000021842) ENSCCAG00000031101 USP12 (ENSCCAG00000023369) ENSCCAG00000021328 GPR12 (ENSCCAG00000020040) WASF3 (ENSCCAG00000029799) Marmoset MODERN SPECIES 17 USPL1 (ENSCJAG00000021616) ENSCJAG00000020439 ENSCJAG00000079039 KATNAL1 (ENSCJAG00000021612) UBL3 (ENSCJAG00000019517) ENSCJAG00000058143 SLC7A1 (ENSCJAG00000019515) ENSCJAG00000072801 MTUS2 (ENSCJAG00000019500) ##13 SLC46A3 (ENSCJAG00000019491) #14 POMP (ENSCJAG00000019473) #15 ENSCJAG00000080582 FLT1 (ENSCJAG00000019447) #19 PAN3 (ENSCJAG00000019421) #20 ENSCJAG00000073991 FLT3 (ENSCJAG00000019405) #22 ENSCJAG00000019404 CDX2 (ENSCJAG00000019398) #24 ENSCJAG00000076582 PDX1 (ENSCJAG00000078316) #25 GSX1 (ENSCJAG00000080181) #26 POLR1D (ENSCJAG00000044669) LNX2 (ENSCJAG00000019379) MTIF3 (ENSCJAG00000019378) GTF3A (ENSCJAG00000077697) RASL11A (ENSCJAG00000019369) ENSCJAG00000044684 ENSCJAG00000069611 ENSCJAG00000073678 USP12 (ENSCJAG00000019344) ENSCJAG00000086732 Mas night monkey MODERN SPECIES 331 ENSANAG00000035277 #15 FLT1 (ENSANAG00000027521) #19 ENSANAG00000028102 PAN3 (ENSANAG00000028419) #20 ENSANAG00000034890 FLT3 (ENSANAG00000025242) #22 URAD (ENSANAG00000029018) #23 CDX2 (ENSANAG00000030392) #24 PDX1 (ENSANAG00000033534) #25 GSX1 (ENSANAG00000020508) #26 POLR1D (ENSANAG00000024486) LNX2 (ENSANAG00000028866) ENSANAG00000024188 MTIF3 (ENSANAG00000031630) GTF3A (ENSANAG00000019293) RASL11A (ENSANAG00000027999) ENSANAG00000023031 ENSANAG00000032118 NUP58 (ENSANAG00000023073) MTMR6 (ENSANAG00000025737) AMER2 (ENSANAG00000025607) Tarsier MODERN SPECIES 5212 OPN5 (ENSTSYG00000005962) ADGRF4 (ENSTSYG00000002483) ENSTSYG00000002476 CD2AP (ENSTSYG00000002464) ENSTSYG00000034627 PAN3 (ENSTSYG00000011845) #20 FLT3 (ENSTSYG00000011237) #22 ENSTSYG00000029265 #24 Strepsirrhini ANCESTRAL SPECIES 41 ENSGT00940000159635 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00950000183120.e.b.a.a.b.b.a.b.b ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00950000182922.a.a.a.b.b.a.a.a ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Lemuriformes ANCESTRAL SPECIES 18 ENSGT00940000155499 ENSGT00940000159635 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a ENSGT00940000153284.a.h ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b.d ENSGT00950000183171.B Mouse lemur MODERN SPECIES 4 TEX26 (ENSMICG00000008723) MEDAG (ENSMICG00000011156) ALOX5AP (ENSMICG00000001953) USPL1 (ENSMICG00000045622) ENSMICG00000007144 KATNAL1 (ENSMICG00000004250) UBL3 (ENSMICG00000033508) SLC7A1 (ENSMICG00000016312) ENSMICG00000032922 ##13 ENSMICG00000016299 ##13 SLC46A3 (ENSMICG00000016295) #14 POMP (ENSMICG00000032068) #15 FLT1 (ENSMICG00000016251) #19 PAN3 (ENSMICG00000016237) #20 ENSMICG00000027752 FLT3 (ENSMICG00000016201) #22 ENSMICG00000032881 CDX2 (ENSMICG00000031345) #24 PDX1 (ENSMICG00000043487) #25 GSX1 (ENSMICG00000044124) #26 ENSMICG00000016883 LNX2 (ENSMICG00000016873) MTIF3 (ENSMICG00000014777) GTF3A (ENSMICG00000014763) RASL11A (ENSMICG00000029724) ENSMICG00000006269 ENSMICG00000028275 SGCG (ENSMICG00000038162) SACS (ENSMICG00000034895) ENSMICG00000042745 MIPEP (ENSMICG00000036068) Lemuriformes_a ANCESTRAL SPECIES 218 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00950000182922.a.a.a.b.b.a.a.a ENSGT00940000153284.a.h Coquerels sifaka MODERN SPECIES 436 FLT3 (ENSPCOG00000024372) #22 ENSPCOG00000024369 CDX2 (ENSPCOG00000017128) #24 PDX1 (ENSPCOG00000006631) #25 GSX1 (ENSPCOG00000018002) #26 POLR1D (ENSPCOG00000028175) LNX2 (ENSPCOG00000027388) MTIF3 (ENSPCOG00000025631) GTF3A (ENSPCOG00000016742) RASL11A (ENSPCOG00000009447) ENSPCOG00000024417 USP12 (ENSPCOG00000027540) SGCG (ENSPCOG00000024563) SACS (ENSPCOG00000014915) TNFRSF19 (ENSPCOG00000024171) MIPEP (ENSPCOG00000022864) Greater bamboo lemur MODERN SPECIES 742 FLT3 (ENSPSMG00000023610) #22 URAD (ENSPSMG00000023629) #23 CDX2 (ENSPSMG00000023632) #24 PDX1 (ENSPSMG00000023637) #25 GSX1 (ENSPSMG00000023639) #26 ENSPSMG00000023644 LNX2 (ENSPSMG00000023653) MTIF3 (ENSPSMG00000023658) GTF3A (ENSPSMG00000023668) RASL11A (ENSPSMG00000023672) ENSPSMG00000023677 ENSPSMG00000023686 USP12 (ENSPSMG00000023737) Bushbaby MODERN SPECIES 235 MEDAG (ENSOGAG00000034882) ALOX5AP (ENSOGAG00000015495) USPL1 (ENSOGAG00000015490) ENSOGAG00000026314 ENSOGAG00000030054 ENSOGAG00000003205 KATNAL1 (ENSOGAG00000011308) UBL3 (ENSOGAG00000004035) SLC7A1 (ENSOGAG00000010813) MTUS2 (ENSOGAG00000010807) ##13 SLC46A3 (ENSOGAG00000006042) #14 POMP (ENSOGAG00000006044) #15 FLT1 (ENSOGAG00000014611) #19 PAN3 (ENSOGAG00000014604) #20 ENSOGAG00000031357 FLT3 (ENSOGAG00000016694) #22 ENSOGAG00000016692 CDX2 (ENSOGAG00000026117) #24 PDX1 (ENSOGAG00000016688) #25 GSX1 (ENSOGAG00000011242) #26 POLR1D (ENSOGAG00000014601) LNX2 (ENSOGAG00000014599) MTIF3 (ENSOGAG00000014597) GTF3A (ENSOGAG00000014589) RASL11A (ENSOGAG00000008177) ENSOGAG00000008181 ENSOGAG00000030191 USP12 (ENSOGAG00000030639) GPR12 (ENSOGAG00000006144) WASF3 (ENSOGAG00000006728) ENSOGAG00000026985 Euarchontoglires_A ANCESTRAL SPECIES 21 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Tree shrew MODERN SPECIES 948 FLT3 (ENSTBEG00000015242) #22 Glires ANCESTRAL SPECIES 22 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Rodentia ANCESTRAL SPECIES 22 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Rodentia_A ANCESTRAL SPECIES 22 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Hystricomorpha ANCESTRAL SPECIES 25 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.p #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.c ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Hystricomorpha_a ANCESTRAL SPECIES 21 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.p #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.c ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Hystricomorpha_b ANCESTRAL SPECIES 48 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.p #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.c ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Degu MODERN SPECIES 79 ALOX5AP (ENSODEG00000005645) USPL1 (ENSODEG00000007176) ENSODEG00000006120 KATNAL1 (ENSODEG00000005926) UBL3 (ENSODEG00000005571) ENSODEG00000005438 SLC7A1 (ENSODEG00000005306) ENSODEG00000005871 ##13 ENSODEG00000006635 SLC46A3 (ENSODEG00000006238) #14 ENSODEG00000005569 ENSODEG00000005111 #15 ENSODEG00000006274 #19 ENSODEG00000006016 PAN3 (ENSODEG00000005038) #20 FLT3 (ENSODEG00000007884) #22 ENSODEG00000007620 CDX2 (ENSODEG00000007340) #24 PDX1 (ENSODEG00000005235) #25 ENSODEG00000019134 GSX1 (ENSODEG00000005135) #26 ENSODEG00000006454 ENSODEG00000005294 LNX2 (ENSODEG00000006222) MTIF3 (ENSODEG00000006818) GTF3A (ENSODEG00000006725) RASL11A (ENSODEG00000005775) ENSODEG00000005022 USP12 (ENSODEG00000006744) GPR12 (ENSODEG00000006388) WASF3 (ENSODEG00000005353) Long-tailed chinchilla MODERN SPECIES 204 SLC46A3 (ENSCLAG00000009379) #14 POMP (ENSCLAG00000008609) #15 FLT1 (ENSCLAG00000008187) #19 PAN3 (ENSCLAG00000007575) #20 FLT3 (ENSCLAG00000007093) #22 CDX2 (ENSCLAG00000006810) #24 PDX1 (ENSCLAG00000006652) #25 GSX1 (ENSCLAG00000004357) #26 ENSCLAG00000004320 POLR1D (ENSCLAG00000017623) LNX2 (ENSCLAG00000004148) MTIF3 (ENSCLAG00000004080) GTF3A (ENSCLAG00000003912) RASL11A (ENSCLAG00000003867) Rpl21 (ENSCLAG00000003656) USP12 (ENSCLAG00000003543) GPR12 (ENSCLAG00000003409) WASF3 (ENSCLAG00000003372) CDK8 (ENSCLAG00000003311) RNF6 (ENSCLAG00000003242) Guinea pig MODERN SPECIES 6 B3GLCT (ENSCPOG00000007455) ENSCPOG00000035490 ENSCPOG00000007441 MEDAG (ENSCPOG00000003921) ALOX5AP (ENSCPOG00000032690) USPL1 (ENSCPOG00000009937) HMGB1 (ENSCPOG00000031835) KATNAL1 (ENSCPOG00000000804) UBL3 (ENSCPOG00000036242) SLC7A1 (ENSCPOG00000005590) ENSCPOG00000005581 ##13 SLC46A3 (ENSCPOG00000015460) #14 POMP (ENSCPOG00000001710) #15 FLT1 (ENSCPOG00000013357) #19 PAN3 (ENSCPOG00000013349) #20 FLT3 (ENSCPOG00000007285) #22 CDX2 (ENSCPOG00000007276) #24 PDX1 (ENSCPOG00000024534) #25 ENSCPOG00000026854 ENSCPOG00000033461 LNX2 (ENSCPOG00000010152) MTIF3 (ENSCPOG00000010148) GTF3A (ENSCPOG00000010143) RASL11A (ENSCPOG00000031264) ENSCPOG00000008784 USP12 (ENSCPOG00000005241) ENSCPOG00000020112 WASF3 (ENSCPOG00000010156) CDK8 (ENSCPOG00000040435) RNF6 (ENSCPOG00000009120) SHISA2 (ENSCPOG00000009049) Naked mole-rat female MODERN SPECIES 2 MEDAG (ENSHGLG00000037818) ALOX5AP (ENSHGLG00000013689) USPL1 (ENSHGLG00000036213) ENSHGLG00000003352 KATNAL1 (ENSHGLG00000003538) UBL3 (ENSHGLG00000040587) ENSHGLG00000033244 ENSHGLG00000019220 ENSHGLG00000013589 ##13 ENSHGLG00000012383 ENSHGLG00000039882 ##15 SLC46A3 (ENSHGLG00000007999) #14 ENSHGLG00000008991 #15 FLT1 (ENSHGLG00000003643) #19 PAN3 (ENSHGLG00000018782) #20 FLT3 (ENSHGLG00000005717) #22 URAD (ENSHGLG00000008479) #23 CDX2 (ENSHGLG00000009166) #24 PDX1 (ENSHGLG00000010243) #25 GSX1 (ENSHGLG00000039858) #26 ENSHGLG00000003202 POLR1D (ENSHGLG00000039229) LNX2 (ENSHGLG00000003410) MTIF3 (ENSHGLG00000003959) ENSHGLG00000004173 RASL11A (ENSHGLG00000005304) ENSHGLG00000005660 ENSHGLG00000006711 GPR12 (ENSHGLG00000042343) WASF3 (ENSHGLG00000006350) ENSHGLG00000006446 Sciuridae ANCESTRAL SPECIES 34 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a.g.a ENSGT00950000182922.a.a.a.b.a.a.b.a ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a Marmotini ANCESTRAL SPECIES 29 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.b.b ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a.g.a ENSGT00950000182922.a.a.a.b.a.a.b.a ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00940000158453.a Marmotini_b ANCESTRAL SPECIES 39 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.a ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00940000158453.a ENSGT01050000244955.a.a ENSGT01050000244897.a.b.b.b Arctic ground squirrel MODERN SPECIES 58 ENSUPAG00010000650 TEX26 (ENSUPAG00010000608) MEDAG (ENSUPAG00010000596) ALOX5AP (ENSUPAG00010000582) USPL1 (ENSUPAG00010000537) ENSUPAG00010000514 KATNAL1 (ENSUPAG00010000483) UBL3 (ENSUPAG00010000449) SLC7A1 (ENSUPAG00010000429) ENSUPAG00010000338 ##13 ENSUPAG00010000323 SLC46A3 (ENSUPAG00010000307) #14 POMP (ENSUPAG00010000279) #15 FLT1 (ENSUPAG00010000212) #19 PAN3 (ENSUPAG00010000039) #20 FLT3 (ENSUPAG00010018139) #22 ENSUPAG00010018133 CDX2 (ENSUPAG00010018125) #24 PDX1 (ENSUPAG00010018122) #25 GSX1 (ENSUPAG00010018112) #26 POLR1D (ENSUPAG00010018107) LNX2 (ENSUPAG00010018096) MTIF3 (ENSUPAG00010018090) GTF3A (ENSUPAG00010018082) RASL11A (ENSUPAG00010018073) ENSUPAG00010018061 USP12 (ENSUPAG00010018049) GPR12 (ENSUPAG00010018043) SLITRK5 (ENSUPAG00010018031) Squirrel MODERN SPECIES 72 B3GLCT (ENSSTOG00000001710) HSPH1 (ENSSTOG00000001700) ENSSTOG00000020892 MEDAG (ENSSTOG00000003534) ALOX5AP (ENSSTOG00000010915) USPL1 (ENSSTOG00000028023) ENSSTOG00000000443 KATNAL1 (ENSSTOG00000008802) UBL3 (ENSSTOG00000012777) SLC7A1 (ENSSTOG00000012771) ENSSTOG00000022794 ##13 SLC46A3 (ENSSTOG00000013694) #14 POMP (ENSSTOG00000013687) #15 FLT1 (ENSSTOG00000021178) #19 PAN3 (ENSSTOG00000009453) #20 FLT3 (ENSSTOG00000002925) #22 ENSSTOG00000028014 ENSSTOG00000002918 #24 PDX1 (ENSSTOG00000028173) #25 GSX1 (ENSSTOG00000029234) #26 POLR1D (ENSSTOG00000013877) LNX2 (ENSSTOG00000013869) MTIF3 (ENSSTOG00000013866) GTF3A (ENSSTOG00000013853) RASL11A (ENSSTOG00000023879) ENSSTOG00000033637 USP12 (ENSSTOG00000011364) ENSSTOG00000023839 GPR12 (ENSSTOG00000011362) SLITRK5 (ENSSTOG00000022257) ENSSTOG00000029870 Alpin marmot MODERN SPECIES 13 HSPH1 (ENSMMMG00000021945) ENSMMMG00000021936 TEX26 (ENSMMMG00000021931) MEDAG (ENSMMMG00000021928) ALOX5AP (ENSMMMG00000021924) ENSMMMG00000021912 ENSMMMG00000021875 KATNAL1 (ENSMMMG00000021861) UBL3 (ENSMMMG00000021836) SLC7A1 (ENSMMMG00000021811) ENSMMMG00000021777 ##13 SLC46A3 (ENSMMMG00000021759) #14 POMP (ENSMMMG00000021745) #15 FLT1 (ENSMMMG00000021722) #19 PAN3 (ENSMMMG00000021592) #20 FLT3 (ENSMMMG00000021498) #22 ENSMMMG00000021485 CDX2 (ENSMMMG00000021482) #24 GSX1 (ENSMMMG00000021480) #26 POLR1D (ENSMMMG00000021469) LNX2 (ENSMMMG00000021459) MTIF3 (ENSMMMG00000021440) GTF3A (ENSMMMG00000021436) RASL11A (ENSMMMG00000021424) RPL21 (ENSMMMG00000021415) ENSMMMG00000021402 ENSMMMG00000021396 GPR12 (ENSMMMG00000021388) SLITRK5 (ENSMMMG00000021362) ENSMMMG00000021355 GPC5 (ENSMMMG00000021337) Eurasian red squirrel MODERN SPECIES 13 HSPH1 (ENSSVLG00005021367) ENSSVLG00005021904 TEX26 (ENSSVLG00005022083) MEDAG (ENSSVLG00005022152) ALOX5AP (ENSSVLG00005022177) USPL1 (ENSSVLG00005022232) ENSSVLG00005022302 KATNAL1 (ENSSVLG00005022343) UBL3 (ENSSVLG00005022374) SLC7A1 (ENSSVLG00005022416) MTUS2 (ENSSVLG00005022484) ##13 SLC46A3 (ENSSVLG00005022784) #14 POMP (ENSSVLG00005022839) #15 FLT1 (ENSSVLG00005022893) #19 PAN3 (ENSSVLG00005022998) #20 FLT3 (ENSSVLG00005023095) #22 URAD (ENSSVLG00005023233) #23 CDX2 (ENSSVLG00005023249) #24 PDX1 (ENSSVLG00005023276) #25 GSX1 (ENSSVLG00005023295) #26 POLR1D (ENSSVLG00005023318) LNX2 (ENSSVLG00005023366) MTIF3 (ENSSVLG00005023396) GTF3A (ENSSVLG00005023413) RASL11A (ENSSVLG00005023466) ENSSVLG00005000213 ENSSVLG00005000350 GPR12 (ENSSVLG00005000385) ENSSVLG00005000420 ENSSVLG00005000440 SLITRK5 (ENSSVLG00005000517) Rodentia_B ANCESTRAL SPECIES 25 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00950000182922.a.a.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Kangaroo rat MODERN SPECIES 421 Wdr95 (ENSDORG00000026485) ENSDORG00000008558 Medag (ENSDORG00000008557) Alox5ap (ENSDORG00000006041) Uspl1 (ENSDORG00000007790) ENSDORG00000027930 Katnal1 (ENSDORG00000012794) Ubl3 (ENSDORG00000026903) ENSDORG00000026706 Slc7a1 (ENSDORG00000006086) ENSDORG00000025782 ##13 Slc46a3 (ENSDORG00000012433) #14 Pomp (ENSDORG00000012432) #15 Flt1 (ENSDORG00000014729) #19 Pan3 (ENSDORG00000014727) #20 Flt3 (ENSDORG00000010727) #22 Urad (ENSDORG00000025006) Cdx2 (ENSDORG00000005495) #24 Pdx1 (ENSDORG00000008418) #25 Gsx1 (ENSDORG00000029182) #26 Polr1d (ENSDORG00000029155) Lnx2 (ENSDORG00000013453) ENSDORG00000006081 Gtf3a (ENSDORG00000006079) Rasl11a (ENSDORG00000026016) ENSDORG00000002226 ENSDORG00000002224 Usp12 (ENSDORG00000009137) Gpr12 (ENSDORG00000011141) Wasf3 (ENSDORG00000003345) Cdk8 (ENSDORG00000011151) Myomorpha ANCESTRAL SPECIES 46 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j Muroidea ANCESTRAL SPECIES 68 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j Muroidea_A ANCESTRAL SPECIES 27 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.d ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j Cricetidae ANCESTRAL SPECIES 27 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.d ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j.a Cricetidae_B ANCESTRAL SPECIES 49 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.d ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j.a Northern American deer mouse MODERN SPECIES 15 Wdr95 (ENSPEMG00000016428) Tex26 (ENSPEMG00000019024) Medag (ENSPEMG00000000331) Alox5ap (ENSPEMG00000000576) Uspl1 (ENSPEMG00000003660) ENSPEMG00000000834 Katnal1 (ENSPEMG00000009164) Ubl3 (ENSPEMG00000010779) Slc7a1 (ENSPEMG00000006808) Mtus2 (ENSPEMG00000011863) ##13 ENSPEMG00000024696 Slc46a3 (ENSPEMG00000014019) #14 ENSPEMG00000014341 #15 Flt1 (ENSPEMG00000019000) #19 Pan3 (ENSPEMG00000008992) #20 Flt3 (ENSPEMG00000012278) #22 Urad (ENSPEMG00000025423) Cdx2 (ENSPEMG00000000632) #24 Pdx1 (ENSPEMG00000001176) #25 Gsx1 (ENSPEMG00000004992) #26 Polr1d (ENSPEMG00000006336) Lnx2 (ENSPEMG00000008280) Mtif3 (ENSPEMG00000000930) Gtf3a (ENSPEMG00000003201) Rasl11a (ENSPEMG00000004475) Rpl21 (ENSPEMG00000006041) Usp12 (ENSPEMG00000008193) Gpr12 (ENSPEMG00000010665) ENSPEMG00000030961 Wasf3 (ENSPEMG00000011510) Cdk8 (ENSPEMG00000012706) Prairie vole MODERN SPECIES 7 Wdr95 (ENSMOCG00000021942) Tex26 (ENSMOCG00000013830) Medag (ENSMOCG00000012447) Alox5ap (ENSMOCG00000018258) ENSMOCG00000018612 ENSMOCG00000018161 Katnal1 (ENSMOCG00000013914) Ubl3 (ENSMOCG00000012896) Slc7a1 (ENSMOCG00000022298) Mtus2 (ENSMOCG00000013900) ##13 Slc46a3 (ENSMOCG00000007090) #14 Pomp (ENSMOCG00000006131) #15 ENSMOCG00000000648 Flt1 (ENSMOCG00000019790) #19 Pan3 (ENSMOCG00000001443) #20 Flt3 (ENSMOCG00000015945) #22 Urad (ENSMOCG00000018154) Cdx2 (ENSMOCG00000010222) #24 Pdx1 (ENSMOCG00000007886) #25 Gsx1 (ENSMOCG00000002374) #26 Polr1d (ENSMOCG00000021288) Lnx2 (ENSMOCG00000022088) Mtif3 (ENSMOCG00000017226) Gtf3a (ENSMOCG00000004408) ENSMOCG00000017124 Rasl11a (ENSMOCG00000000626) Rpl21 (ENSMOCG00000003487) Usp12 (ENSMOCG00000001714) Gpr12 (ENSMOCG00000009890) ENSMOCG00000017944 Rnf6 (ENSMOCG00000006180) Cricetinae ANCESTRAL SPECIES 19 ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.d ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j.a Chinese hamster chok1gshd MODERN SPECIES 130 Tex26 (ENSCGRG00001015836) Medag (ENSCGRG00001024417) ENSCGRG00001025063 Alox5ap (ENSCGRG00001018470) ENSCGRG00001018342 Katnal1 (ENSCGRG00001024027) Ubl3 (ENSCGRG00001002093) Slc7a1 (ENSCGRG00001019393) Mtus2 (ENSCGRG00001023648) ##13 ENSCGRG00001001206 Slc46a3 (ENSCGRG00001023870) #14 Pomp (ENSCGRG00001000803) #15 Flt1 (ENSCGRG00001000764) #19 Pan3 (ENSCGRG00001024986) #20 ENSCGRG00001012489 Flt3 (ENSCGRG00001010328) #22 Urad (ENSCGRG00001021146) Cdx2 (ENSCGRG00001024259) #24 Pdx1 (ENSCGRG00001024891) #25 Gsx1 (ENSCGRG00001017641) #26 Polr1d (ENSCGRG00001021251) Lnx2 (ENSCGRG00001022751) ENSCGRG00001024532 Mtif3 (ENSCGRG00001024612) Gtf3a (ENSCGRG00001024969) Rasl11a (ENSCGRG00001014752) Rpl21 (ENSCGRG00001007602) ENSCGRG00001021742 Gpr12 (ENSCGRG00001003285) Wasf3 (ENSCGRG00001003303) Cdk8 (ENSCGRG00001010747) Golden Hamster MODERN SPECIES 762 Hsph1 (ENSMAUG00000002443) Wdr95 (ENSMAUG00000014604) Tex26 (ENSMAUG00000016345) Medag (ENSMAUG00000009604) Alox5ap (ENSMAUG00000012262) ENSMAUG00000013736 ENSMAUG00000017646 Katnal1 (ENSMAUG00000007731) Ubl3 (ENSMAUG00000016399) Slc7a1 (ENSMAUG00000000359) ENSMAUG00000018323 ##13 ENSMAUG00000020285 Pomp (ENSMAUG00000006509) #15 Flt1 (ENSMAUG00000006859) #19 Pan3 (ENSMAUG00000021155) #20 Flt3 (ENSMAUG00000011952) #22 ENSMAUG00000001106 Urad (ENSMAUG00000019946) Cdx2 (ENSMAUG00000020822) #24 Pdx1 (ENSMAUG00000021082) #25 Polr1d (ENSMAUG00000001946) Lnx2 (ENSMAUG00000009457) Mtif3 (ENSMAUG00000011167) Gtf3a (ENSMAUG00000016253) Rasl11a (ENSMAUG00000019356) ENSMAUG00000006957 Usp12 (ENSMAUG00000010310) ENSMAUG00000010877 Gpr12 (ENSMAUG00000015064) Rfc3 (ENSMAUG00000016464) Murinae ANCESTRAL SPECIES 28 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00960000191336 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.c.c.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j Mus ANCESTRAL SPECIES 17 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00960000191336 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.c.c.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j Mus_A ANCESTRAL SPECIES 6 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00960000191336 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.c.c.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j Mus_B ANCESTRAL SPECIES 4 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00960000191336 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.c.c.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j Mus_C ANCESTRAL SPECIES 4 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00960000191336 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a.n ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.c.c.b ENSGT00940000153284.a.h ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.j spretus MODERN SPECIES 14 Wdr95 (MGP_SPRETEiJ_G0029052) Tex26 (MGP_SPRETEiJ_G0029051) Medag (MGP_SPRETEiJ_G0029050) Alox5ap (MGP_SPRETEiJ_G0029049) Uspl1 (MGP_SPRETEiJ_G0029048) MGP_SPRETEiJ_G0029047 MGP_SPRETEiJ_G0029046 MGP_SPRETEiJ_G0029045 Ubl3 (MGP_SPRETEiJ_G0029044) Slc7a1 (MGP_SPRETEiJ_G0029043) Mtus2 (MGP_SPRETEiJ_G0029042) ##13 Slc46a3 (MGP_SPRETEiJ_G0029041) #14 Pomp (MGP_SPRETEiJ_G0029040) #15 Flt1 (MGP_SPRETEiJ_G0029039) #19 Pan3 (MGP_SPRETEiJ_G0029038) #20 Flt3 (MGP_SPRETEiJ_G0029037) #22 Urad (MGP_SPRETEiJ_G0029036) Cdx2 (MGP_SPRETEiJ_G0029035) #24 Pdx1 (MGP_SPRETEiJ_G0029034) #25 Gsx1 (MGP_SPRETEiJ_G0029033) #26 Polr1d (MGP_SPRETEiJ_G0029032) Lnx2 (MGP_SPRETEiJ_G0029031) Mtif3 (MGP_SPRETEiJ_G0029030) Gtf3a (MGP_SPRETEiJ_G0029029) Rasl11a (MGP_SPRETEiJ_G0029028) MGP_SPRETEiJ_G0029027 Usp12 (MGP_SPRETEiJ_G0029026) Gpr12 (MGP_SPRETEiJ_G0029025) Wasf3 (MGP_SPRETEiJ_G0029024) Cdk8 (MGP_SPRETEiJ_G0029023) Rnf6 (MGP_SPRETEiJ_G0029022) Steppe mouse MODERN SPECIES 3364 Tex26 (ENSMSIG00000023128) Medag (ENSMSIG00000023188) ENSMSIG00000023226 Alox5ap (ENSMSIG00000023243) Uspl1 (ENSMSIG00000023285) ENSMSIG00000023332 Katnal1 (ENSMSIG00000023377) Ubl3 (ENSMSIG00000023402) Slc7a1 (ENSMSIG00000023421) Mtus2 (ENSMSIG00000023484) ##13 Slc46a3 (ENSMSIG00000023578) #14 Pomp (ENSMSIG00000023598) #15 ENSMSIG00000023628 Flt1 (ENSMSIG00000023642) #19 Pan3 (ENSMSIG00000023687) #20 Flt3 (ENSMSIG00000023851) #22 ENSMSIG00000023930 ENSMSIG00000023941 #23 Cdx2 (ENSMSIG00000023947) #24 Pdx1 (ENSMSIG00000023956) #25 Gsx1 (ENSMSIG00000023969) #26 ENSMSIG00000023978 Lnx2 (ENSMSIG00000023999) Mtif3 (ENSMSIG00000024005) Gtf3a (ENSMSIG00000024026) Rasl11a (ENSMSIG00000024039) ENSMSIG00000024049 Usp12 (ENSMSIG00000024096) ENSMSIG00000024119 Gpr12 (ENSMSIG00000024129) Wasf3 (ENSMSIG00000024134) Mouse MODERN SPECIES 14 Hsph1 (ENSMUSG00000029657) Wdr95 (ENSMUSG00000029658) Tex26 (ENSMUSG00000029660) Medag (ENSMUSG00000029659) Alox5ap (ENSMUSG00000060063) Uspl1 (ENSMUSG00000041264) Hmgb1 (ENSMUSG00000066551) Katnal1 (ENSMUSG00000041298) Ubl3 (ENSMUSG00000001687) Slc7a1 (ENSMUSG00000041313) Mtus2 (ENSMUSG00000029651) ##13 Slc46a3 (ENSMUSG00000029650) #14 Pomp (ENSMUSG00000029649) #15 Flt1 (ENSMUSG00000029648) #19 Pan3 (ENSMUSG00000029647) #20 Flt3 (ENSMUSG00000042817) #22 Urad (ENSMUSG00000075543) Cdx2 (ENSMUSG00000029646) #24 Pdx1 (ENSMUSG00000029644) #25 Gsx1 (ENSMUSG00000053129) #26 Polr1d (ENSMUSG00000029642) Lnx2 (ENSMUSG00000016520) Mtif3 (ENSMUSG00000016510) Gtf3a (ENSMUSG00000016503) Rasl11a (ENSMUSG00000029641) Rpl21 (ENSMUSG00000041453) Usp12 (ENSMUSG00000029640) Gpr12 (ENSMUSG00000041468) Gm3415 (ENSMUSG00000095557) Gm3409 (ENSMUSG00000096664) Gm3404 (ENSMUSG00000079091) Ryukyu mouse MODERN SPECIES 14 Wdr95 (MGP_CAROLIEiJ_G0028054) Tex26 (MGP_CAROLIEiJ_G0028053) Medag (MGP_CAROLIEiJ_G0028052) MGP_CAROLIEiJ_G0028051 Uspl1 (MGP_CAROLIEiJ_G0028050) MGP_CAROLIEiJ_G0028049 MGP_CAROLIEiJ_G0028048 MGP_CAROLIEiJ_G0028047 Ubl3 (MGP_CAROLIEiJ_G0028046) Slc7a1 (MGP_CAROLIEiJ_G0028045) Mtus2 (MGP_CAROLIEiJ_G0028044) ##13 Slc46a3 (MGP_CAROLIEiJ_G0028043) #14 Pomp (MGP_CAROLIEiJ_G0028042) #15 Flt1 (MGP_CAROLIEiJ_G0028041) #19 Pan3 (MGP_CAROLIEiJ_G0028040) #20 Flt3 (MGP_CAROLIEiJ_G0028039) #22 Urad (MGP_CAROLIEiJ_G0028038) Cdx2 (MGP_CAROLIEiJ_G0028037) #24 Pdx1 (MGP_CAROLIEiJ_G0028036) #25 Gsx1 (MGP_CAROLIEiJ_G0028035) #26 Polr1d (MGP_CAROLIEiJ_G0028034) Lnx2 (MGP_CAROLIEiJ_G0028033) Mtif3 (MGP_CAROLIEiJ_G0028032) Gtf3a (MGP_CAROLIEiJ_G0028031) Rasl11a (MGP_CAROLIEiJ_G0028030) Rpl21 (MGP_CAROLIEiJ_G0028029) Usp12 (MGP_CAROLIEiJ_G0028028) Gpr12 (MGP_CAROLIEiJ_G0028027) Wasf3 (MGP_CAROLIEiJ_G0028026) Cdk8 (MGP_CAROLIEiJ_G0028025) Rnf6 (MGP_CAROLIEiJ_G0028024) Shrew mouse MODERN SPECIES 15 MGP_PahariEiJ_G0024620 Tex26 (MGP_PahariEiJ_G0024619) Medag (MGP_PahariEiJ_G0024618) Alox5ap (MGP_PahariEiJ_G0024617) Uspl1 (MGP_PahariEiJ_G0024616) MGP_PahariEiJ_G0024615 MGP_PahariEiJ_G0024614 MGP_PahariEiJ_G0024613 Ubl3 (MGP_PahariEiJ_G0024612) Slc7a1 (MGP_PahariEiJ_G0024611) Mtus2 (MGP_PahariEiJ_G0024610) ##13 Slc46a3 (MGP_PahariEiJ_G0024609) #14 MGP_PahariEiJ_G0024608 Flt1 (MGP_PahariEiJ_G0024607) #19 Pan3 (MGP_PahariEiJ_G0024606) #20 Flt3 (MGP_PahariEiJ_G0024605) #22 Urad (MGP_PahariEiJ_G0024604) Cdx2 (MGP_PahariEiJ_G0024603) #24 Pdx1 (MGP_PahariEiJ_G0024602) #25 Gsx1 (MGP_PahariEiJ_G0024601) #26 Polr1d (MGP_PahariEiJ_G0024600) Lnx2 (MGP_PahariEiJ_G0024599) Mtif3 (MGP_PahariEiJ_G0024598) Gtf3a (MGP_PahariEiJ_G0024597) Rasl11a (MGP_PahariEiJ_G0024596) MGP_PahariEiJ_G0024595 Usp12 (MGP_PahariEiJ_G0024594) Gpr12 (MGP_PahariEiJ_G0024593) Wasf3 (MGP_PahariEiJ_G0024592) Cdk8 (MGP_PahariEiJ_G0024591) Rnf6 (MGP_PahariEiJ_G0024590) Rat MODERN SPECIES 3 Wdr95 (ENSRNOG00000000904) Tex26 (ENSRNOG00000000905) Medag (ENSRNOG00000000906) AABR07035203.1 (ENSRNOG00000060198) Alox5ap (ENSRNOG00000000907) Uspl1 (ENSRNOG00000000909) AABR07035218.1 (ENSRNOG00000029813) Rpl35a-ps6 (ENSRNOG00000069961) Katnal1 (ENSRNOG00000047618) Slc7a1 (ENSRNOG00000000924) Mtus2 (ENSRNOG00000032410) ##13 Slc46a3 (ENSRNOG00000000937) #14 Pomp (ENSRNOG00000049229) ##15 Flt1 (ENSRNOG00000000940) #19 Pan3 (ENSRNOG00000000942) #20 Flt3 (ENSRNOG00000054764) #22 Urad (ENSRNOG00000050360) Cdx2 (ENSRNOG00000032759) #24 Pdx1 (ENSRNOG00000046458) #25 Gsx1 (ENSRNOG00000000952) #26 Polr1d (ENSRNOG00000000954) Lnx2 (ENSRNOG00000000955) Mtif3 (ENSRNOG00000070811) Gtf3a (ENSRNOG00000050016) Rasl11a (ENSRNOG00000000956) Rpl21 (ENSRNOG00000000957) Usp12 (ENSRNOG00000033411) Gpr12 (ENSRNOG00000039832) Wasf3 (ENSRNOG00000048898) LOC120095889 (ENSRNOG00000050264) LOC684427 (ENSRNOG00000069792) Upper Galilee mountains blind mole rat MODERN SPECIES 1878 Tex26 (ENSNGAG00000016306) Medag (ENSNGAG00000021713) Alox5ap (ENSNGAG00000010455) Uspl1 (ENSNGAG00000021450) ENSNGAG00000020735 Katnal1 (ENSNGAG00000018344) Ubl3 (ENSNGAG00000021531) Slc7a1 (ENSNGAG00000011095) ENSNGAG00000023043 ##13 ENSNGAG00000011243 #13 ENSNGAG00000022087 Slc46a3 (ENSNGAG00000023221) #14 ENSNGAG00000019389 #15 Flt1 (ENSNGAG00000022615) #19 Pan3 (ENSNGAG00000005671) #20 Flt3 (ENSNGAG00000022203) #22 Cdx2 (ENSNGAG00000019299) #24 Pdx1 (ENSNGAG00000024275) #25 ENSNGAG00000011527 Gsx1 (ENSNGAG00000013964) #26 ENSNGAG00000020643 ENSNGAG00000019459 Polr1d (ENSNGAG00000006014) Lnx2 (ENSNGAG00000010972) Mtif3 (ENSNGAG00000022911) Gtf3a (ENSNGAG00000023691) Rasl11a (ENSNGAG00000021721) ENSNGAG00000022375 ENSNGAG00000012493 Usp12 (ENSNGAG00000023867) ENSNGAG00000011492 Lesser Egyptian jerboa MODERN SPECIES 73 Hsph1 (ENSJJAG00000000436) Wdr95 (ENSJJAG00000015306) Tex26 (ENSJJAG00000007098) Medag (ENSJJAG00000017396) Alox5ap (ENSJJAG00000004614) ENSJJAG00000014544 ENSJJAG00000000696 Katnal1 (ENSJJAG00000011429) Ubl3 (ENSJJAG00000016514) Slc7a1 (ENSJJAG00000022034) ENSJJAG00000008307 ##13 Slc46a3 (ENSJJAG00000015117) #14 Pomp (ENSJJAG00000014017) #15 Flt1 (ENSJJAG00000009276) #19 Pan3 (ENSJJAG00000013560) #20 Flt3 (ENSJJAG00000004796) #22 Urad (ENSJJAG00000022682) Cdx2 (ENSJJAG00000010229) #24 Pdx1 (ENSJJAG00000017468) #25 Gsx1 (ENSJJAG00000021574) #26 ENSJJAG00000009076 ENSJJAG00000022671 Lnx2 (ENSJJAG00000014998) Mtif3 (ENSJJAG00000013006) Gtf3a (ENSJJAG00000011501) Rasl11a (ENSJJAG00000020910) Usp12 (ENSJJAG00000019341) Gpr12 (ENSJJAG00000012507) Wasf3 (ENSJJAG00000018294) Cdk8 (ENSJJAG00000009532) Rnf6 (ENSJJAG00000023994) Lagomorpha ANCESTRAL SPECIES 166 ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ENSGT00940000153284.a.h Rabbit MODERN SPECIES 468 SLC7A1 (ENSOCUG00000013493) ENSOCUG00000030839 ##13 ENSOCUG00000013473 ##13 SLC46A3 (ENSOCUG00000010129) #14 POMP (ENSOCUG00000010137) #15 FLT1 (ENSOCUG00000008523) #19 PAN3 (ENSOCUG00000008509) #20 FLT3 (ENSOCUG00000004897) #22 URAD (ENSOCUG00000026219) #23 CDX2 (ENSOCUG00000004893) #24 PDX1 (ENSOCUG00000004891) #25 GSX1 (ENSOCUG00000023424) #26 ENSOCUG00000015706 LNX2 (ENSOCUG00000015683) MTIF3 (ENSOCUG00000011721) GTF3A (ENSOCUG00000011713) ENSOCUG00000038419 RASL11A (ENSOCUG00000008121) ENSOCUG00000002506 USP12 (ENSOCUG00000007088) Pika MODERN SPECIES 686 FLT3 (ENSOPRG00000006804) #22 Laurasiatheria ANCESTRAL SPECIES 20 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00950000182922.a.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Laurasiatheria_a ANCESTRAL SPECIES 21 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Artiodactyla ANCESTRAL SPECIES 21 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Suina ANCESTRAL SPECIES 29 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Chacoan peccary MODERN SPECIES 216 ENSCWAG00000017090 TEX26 (ENSCWAG00000017184) MEDAG (ENSCWAG00000017233) ALOX5AP (ENSCWAG00000017261) USPL1 (ENSCWAG00000017300) HMGB1 (ENSCWAG00000017323) KATNAL1 (ENSCWAG00000017366) UBL3 (ENSCWAG00000017400) SLC7A1 (ENSCWAG00000017449) MTUS2 (ENSCWAG00000017501) ##13 SLC46A3 (ENSCWAG00000017732) #14 POMP (ENSCWAG00000017771) #15 ENSCWAG00000017809 FLT1 (ENSCWAG00000017867) #19 PAN3 (ENSCWAG00000018033) #20 FLT3 (ENSCWAG00000018108) #22 URAD (ENSCWAG00000018244) #23 CDX2 (ENSCWAG00000018265) #24 PDX1 (ENSCWAG00000018319) #25 GSX1 (ENSCWAG00000018331) #26 POLR1D (ENSCWAG00000018355) LNX2 (ENSCWAG00000018415) MTIF3 (ENSCWAG00000018433) GTF3A (ENSCWAG00000018454) ENSCWAG00000018472 RASL11A (ENSCWAG00000018481) RPL21 (ENSCWAG00000018513) USP12 (ENSCWAG00000018548) ENSCWAG00000018581 GPR12 (ENSCWAG00000018600) WASF3 (ENSCWAG00000018614) Pig MODERN SPECIES 2 HSPH1 (ENSSSCG00000009334) ENSSSCG00000009333 TEX26 (ENSSSCG00000046261) MEDAG (ENSSSCG00000009331) ALOX5AP (ENSSSCG00000009330) USPL1 (ENSSSCG00000028065) ENSSSCG00000009327 KATNAL1 (ENSSSCG00000009326) ENSSSCG00000035992 SLC7A1 (ENSSSCG00000029456) MTUS2 (ENSSSCG00000025996) ##13 SLC46A3 (ENSSSCG00000009322) #14 POMP (ENSSSCG00000037170) #15 FLT1 (ENSSSCG00000009320) #19 PAN3 (ENSSSCG00000009319) #20 FLT3 (ENSSSCG00000009314) #22 ENSSSCG00000009316 CDX2 (ENSSSCG00000009317) #24 PDX1 (ENSSSCG00000055811) #25 GSX1 (ENSSSCG00000009313) #26 POLR1D (ENSSSCG00000009310) LNX2 (ENSSSCG00000009308) MTIF3 (ENSSSCG00000037313) GTF3A (ENSSSCG00000009305) RASL11A (ENSSSCG00000039890) ENSSSCG00000009303 USP12 (ENSSSCG00000009302) GPR12 (ENSSSCG00000009301) ENSSSCG00000042074 WASF3 (ENSSSCG00000009300) CDK8 (ENSSSCG00000009298) Artiodactyla_a ANCESTRAL SPECIES 22 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Artiodactyla_b ANCESTRAL SPECIES 22 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Cetacea ANCESTRAL SPECIES 20 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00510000047760.j ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Odontoceti ANCESTRAL SPECIES 21 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00510000047760.j ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b.i #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Odontoceti_a ANCESTRAL SPECIES 24 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B.r ##13 ENSGT00510000047760.j ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b.i #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Odontoceti_b ANCESTRAL SPECIES 21 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B.r ##13 ENSGT00510000047760.j ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b.i #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Monodontidae ANCESTRAL SPECIES 15 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B.r ##13 ENSGT00510000047760.j ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b.i #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Narwhal MODERN SPECIES 315 RXFP2 (ENSMMNG00015019687) B3GLCT (ENSMMNG00015019951) HSPH1 (ENSMMNG00015020078) MEDAG (ENSMMNG00015020156) ALOX5AP (ENSMMNG00015020175) USPL1 (ENSMMNG00015020212) HMGB1 (ENSMMNG00015020245) KATNAL1 (ENSMMNG00015020263) UBL3 (ENSMMNG00015020289) SLC7A1 (ENSMMNG00015020307) MTUS2 (ENSMMNG00015020336) ##13 SLC46A3 (ENSMMNG00015020455) #14 ENSMMNG00015020477 #15 FLT1 (ENSMMNG00015020525) #19 PAN3 (ENSMMNG00015020615) #20 FLT3 (ENSMMNG00015020792) #22 URAD (ENSMMNG00015020821) #23 CDX2 (ENSMMNG00015020842) #24 PDX1 (ENSMMNG00015020863) #25 GSX1 (ENSMMNG00015020877) #26 ENSMMNG00015020896 LNX2 (ENSMMNG00015020919) MTIF3 (ENSMMNG00015020934) GTF3A (ENSMMNG00015020949) ENSMMNG00015020968 RASL11A (ENSMMNG00015020985) ENSMMNG00015020992 USP12 (ENSMMNG00015021025) GPR12 (ENSMMNG00015021041) WASF3 (ENSMMNG00015021063) CDK8 (ENSMMNG00015021096) Beluga whale MODERN SPECIES 29 HSPH1 (ENSDLEG00000005268) ENSDLEG00000005251 MEDAG (ENSDLEG00000005244) ALOX5AP (ENSDLEG00000005233) USPL1 (ENSDLEG00000005228) HMGB1 (ENSDLEG00000005222) KATNAL1 (ENSDLEG00000015700) UBL3 (ENSDLEG00000015684) SLC7A1 (ENSDLEG00000015661) MTUS2 (ENSDLEG00000015621) ##13 ENSDLEG00000015614 SLC46A3 (ENSDLEG00000015606) #14 ENSDLEG00000015594 #15 FLT1 (ENSDLEG00000015551) #19 PAN3 (ENSDLEG00000015462) #20 FLT3 (ENSDLEG00000014957) #22 ENSDLEG00000014887 CDX2 (ENSDLEG00000014871) #24 PDX1 (ENSDLEG00000014860) #25 GSX1 (ENSDLEG00000014854) #26 ENSDLEG00000014844 POLR1D (ENSDLEG00000014833) LNX2 (ENSDLEG00000014818) MTIF3 (ENSDLEG00000014809) GTF3A (ENSDLEG00000014795) RASL11A (ENSDLEG00000014782) RPL21 (ENSDLEG00000014757) USP12 (ENSDLEG00000014742) GPR12 (ENSDLEG00000014734) WASF3 (ENSDLEG00000014723) CDK8 (ENSDLEG00000014684) Vaquita MODERN SPECIES 9 MEDAG (ENSPSNG00000011804) ENSPSNG00000011745 ALOX5AP (ENSPSNG00000012197) USPL1 (ENSPSNG00000012125) HMGB1 (ENSPSNG00000012042) KATNAL1 (ENSPSNG00000011976) UBL3 (ENSPSNG00000011923) SLC7A1 (ENSPSNG00000011868) ENSPSNG00000011712 ##13 ENSPSNG00000011610 SLC46A3 (ENSPSNG00000011519) #14 ENSPSNG00000011451 #15 ENSPSNG00000011404 FLT1 (ENSPSNG00000010996) #19 PAN3 (ENSPSNG00000010591) #20 FLT3 (ENSPSNG00000009789) #22 URAD (ENSPSNG00000009637) #23 CDX2 (ENSPSNG00000009587) #24 PDX1 (ENSPSNG00000009545) #25 GSX1 (ENSPSNG00000009508) #26 ENSPSNG00000009434 LNX2 (ENSPSNG00000009360) MTIF3 (ENSPSNG00000009318) GTF3A (ENSPSNG00000009270) RASL11A (ENSPSNG00000009220) ENSPSNG00000009136 USP12 (ENSPSNG00000009102) GPR12 (ENSPSNG00000009076) ENSPSNG00000009063 WASF3 (ENSPSNG00000009017) CDK8 (ENSPSNG00000008895) Dolphin MODERN SPECIES 632 PAN3 (ENSTTRG00000002814) #20 FLT3 (ENSTTRG00000002813) #22 URAD (ENSTTRG00000002812) #23 PDX1 (ENSTTRG00000002811) #25 Sperm whale MODERN SPECIES 4 HSPH1 (ENSPCTG00005015496) TEX26 (ENSPCTG00005015295) MEDAG (ENSPCTG00005015216) ALOX5AP (ENSPCTG00005015171) USPL1 (ENSPCTG00005015111) HMGB1 (ENSPCTG00005015034) KATNAL1 (ENSPCTG00005014985) UBL3 (ENSPCTG00005014919) SLC7A1 (ENSPCTG00005014850) MTUS2 (ENSPCTG00005014659) ##13 ENSPCTG00005014618 SLC46A3 (ENSPCTG00005014585) #14 POMP (ENSPCTG00005014527) #15 FLT1 (ENSPCTG00005014294) #19 PAN3 (ENSPCTG00005014160) #20 FLT3 (ENSPCTG00005013790) #22 ENSPCTG00005013732 CDX2 (ENSPCTG00005013676) #24 PDX1 (ENSPCTG00005013620) #25 GSX1 (ENSPCTG00005013569) #26 POLR1D (ENSPCTG00005013390) LNX2 (ENSPCTG00005013292) MTIF3 (ENSPCTG00005013236) GTF3A (ENSPCTG00005013180) RASL11A (ENSPCTG00005013101) RPL21 (ENSPCTG00005013013) USP12 (ENSPCTG00005012963) ENSPCTG00005012908 GPR12 (ENSPCTG00005012894) WASF3 (ENSPCTG00005012829) CDK8 (ENSPCTG00005012757) Blue whale MODERN SPECIES 9 ENSBMSG00010015688 TEX26 (ENSBMSG00010015652) MEDAG (ENSBMSG00010015612) ALOX5AP (ENSBMSG00010015580) USPL1 (ENSBMSG00010015554) HMGB1 (ENSBMSG00010015522) KATNAL1 (ENSBMSG00010015496) UBL3 (ENSBMSG00010015451) SLC7A1 (ENSBMSG00010015357) ENSBMSG00010015247 ##13 ENSBMSG00010015221 SLC46A3 (ENSBMSG00010015191) #14 ENSBMSG00010015155 #15 FLT1 (ENSBMSG00010014949) #19 PAN3 (ENSBMSG00010014764) #20 FLT3 (ENSBMSG00010014623) #22 URAD (ENSBMSG00010014592) #23 CDX2 (ENSBMSG00010014566) #24 PDX1 (ENSBMSG00010014538) #25 GSX1 (ENSBMSG00010014529) #26 ENSBMSG00010014466 LNX2 (ENSBMSG00010014414) MTIF3 (ENSBMSG00010014375) GTF3A (ENSBMSG00010014329) ENSBMSG00010014311 RASL11A (ENSBMSG00010014298) ENSBMSG00010014255 USP12 (ENSBMSG00010014225) GPR12 (ENSBMSG00010014207) WASF3 (ENSBMSG00010014112) CDK8 (ENSBMSG00010014007) Pecora ANCESTRAL SPECIES 23 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Percora_a ANCESTRAL SPECIES 25 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Bovidae ANCESTRAL SPECIES 25 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Caprinae ANCESTRAL SPECIES 28 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643.k ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424.g ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Rambouillet Sheep MODERN SPECIES 1 B3GLCT (ENSOARG00020008264) HSPH1 (ENSOARG00020008491) ENSOARG00020008926 TEX26 (ENSOARG00020009149) MEDAG (ENSOARG00020009224) ALOX5AP (ENSOARG00020009284) HMGB1 (ENSOARG00020009396) KATNAL1 (ENSOARG00020009464) UBL3 (ENSOARG00020009591) SLC7A1 (ENSOARG00020009646) ENSOARG00020009812 ##13 SLC46A3 (ENSOARG00020009919) #14 ENSOARG00020010005 #15 FLT1 (ENSOARG00020010103) #19 PAN3 (ENSOARG00020010540) #20 FLT3 (ENSOARG00020011519) #22 URAD (ENSOARG00020011747) #23 CDX2 (ENSOARG00020011783) #24 PDX1 (ENSOARG00020011821) #25 GSX1 (ENSOARG00020011857) #26 POLR1D (ENSOARG00020011900) LNX2 (ENSOARG00020012002) MTIF3 (ENSOARG00020012058) ENSOARG00020012106 ENSOARG00020012160 RASL11A (ENSOARG00020012287) ENSOARG00020012335 ENSOARG00020012435 USP12 (ENSOARG00020012488) GPR12 (ENSOARG00020012619) WASF3 (ENSOARG00020012645) Goat MODERN SPECIES 3 B3GLCT (ENSCHIG00000016248) HSPH1 (ENSCHIG00000003518) TEX26 (ENSCHIG00000013376) MEDAG (ENSCHIG00000019733) ALOX5AP (ENSCHIG00000020532) USPL1 (ENSCHIG00000025535) HMGB1 (ENSCHIG00000018473) KATNAL1 (ENSCHIG00000011417) UBL3 (ENSCHIG00000005881) SLC7A1 (ENSCHIG00000017131) MTUS2 (ENSCHIG00000014951) ##13 SLC46A3 (ENSCHIG00000006252) #14 ENSCHIG00000007021 #15 FLT1 (ENSCHIG00000019587) #19 PAN3 (ENSCHIG00000010876) #20 FLT3 (ENSCHIG00000006089) #22 ENSCHIG00000015696 CDX2 (ENSCHIG00000024755) #24 PDX1 (ENSCHIG00000016212) #25 GSX1 (ENSCHIG00000026107) #26 ENSCHIG00000014902 POLR1D (ENSCHIG00000021910) LNX2 (ENSCHIG00000024542) ENSCHIG00000026996 ENSCHIG00000021040 RASL11A (ENSCHIG00000016902) RPL21 (ENSCHIG00000021720) USP12 (ENSCHIG00000006817) GPR12 (ENSCHIG00000007944) WASF3 (ENSCHIG00000017657) CDK8 (ENSCHIG00000006655) Bovinae ANCESTRAL SPECIES 29 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.a ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Bos ANCESTRAL SPECIES 28 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Bos_a ANCESTRAL SPECIES 19 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00390000003643 ENSGT00940000154361.A #26 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Wild yak MODERN SPECIES 1371 HSPH1 (ENSBMUG00000022797) ENSBMUG00000022823 TEX26 (ENSBMUG00000022841) MEDAG (ENSBMUG00000022857) ALOX5AP (ENSBMUG00000022869) USPL1 (ENSBMUG00000022880) HMGB1 (ENSBMUG00000022917) KATNAL1 (ENSBMUG00000022930) UBL3 (ENSBMUG00000022941) SLC7A1 (ENSBMUG00000022964) MTUS2 (ENSBMUG00000022991) ##13 SLC46A3 (ENSBMUG00000023002) #14 POMP (ENSBMUG00000023007) #15 FLT1 (ENSBMUG00000023081) #19 PAN3 (ENSBMUG00000023150) #20 FLT3 (ENSBMUG00000023185) #22 Domestic yak MODERN SPECIES 6 TEX26 (ENSBGRG00000007537) MEDAG (ENSBGRG00000007441) ALOX5AP (ENSBGRG00000007328) USPL1 (ENSBGRG00000007239) ENSBGRG00000007221 ENSBGRG00000007092 KATNAL1 (ENSBGRG00000006924) UBL3 (ENSBGRG00000006856) SLC7A1 (ENSBGRG00000006751) MTUS2 (ENSBGRG00000006670) ##13 SLC46A3 (ENSBGRG00000006624) #14 POMP (ENSBGRG00000006553) #15 ENSBGRG00000006327 #19 ENSBGRG00000006167 PAN3 (ENSBGRG00000005813) #20 FLT3 (ENSBGRG00000005369) #22 ENSBGRG00000005297 CDX2 (ENSBGRG00000005271) #24 PDX1 (ENSBGRG00000005259) #25 ENSBGRG00000005252 ENSBGRG00000005241 GSX1 (ENSBGRG00000005224) #26 ENSBGRG00000005177 LNX2 (ENSBGRG00000005122) MTIF3 (ENSBGRG00000005098) GTF3A (ENSBGRG00000004973) RASL11A (ENSBGRG00000004923) ENSBGRG00000004884 USP12 (ENSBGRG00000004775) ENSBGRG00000004746 ENSBGRG00000004721 Bos_b ANCESTRAL SPECIES 33 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT01100000263481.n.a.b.b.a.b.b.a.a.b.a.b ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.a ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Hybrid Bos Indicus MODERN SPECIES 3 TEX26 (ENSBIXG00005010612) MEDAG (ENSBIXG00005010602) ALOX5AP (ENSBIXG00005000697) USPL1 (ENSBIXG00005010560) ENSBIXG00005010515 ENSBIXG00005006774 KATNAL1 (ENSBIXG00005000876) ENSBIXG00005000793 UBL3 (ENSBIXG00005010348) SLC7A1 (ENSBIXG00005006772) MTUS2 (ENSBIXG00005010291) ##13 SLC46A3 (ENSBIXG00005000810) #14 POMP (ENSBIXG00005010225) #15 FLT1 (ENSBIXG00005010159) #19 PAN3 (ENSBIXG00005005472) #20 FLT3 (ENSBIXG00005005466) #22 ENSBIXG00005000568 CDX2 (ENSBIXG00005000565) #24 PDX1 (ENSBIXG00005005368) #25 GSX1 (ENSBIXG00005009693) #26 POLR1D (ENSBIXG00005009666) LNX2 (ENSBIXG00005009616) ENSBIXG00005009581 MTIF3 (ENSBIXG00005000533) RASL11A (ENSBIXG00005009524) ENSBIXG00005009506 USP12 (ENSBIXG00005000510) GPR12 (ENSBIXG00005005366) WASF3 (ENSBIXG00005009436) CDK8 (ENSBIXG00005009401) RNF6 (ENSBIXG00005009338) Cow MODERN SPECIES 3 HSPH1 (ENSBTAG00000005012) ENSBTAG00000016052 TEX26 (ENSBTAG00000033386) MEDAG (ENSBTAG00000008271) ALOX5AP (ENSBTAG00000013201) USPL1 (ENSBTAG00000001178) HMGB1 (ENSBTAG00000018103) KATNAL1 (ENSBTAG00000009340) ENSBTAG00000052411 UBL3 (ENSBTAG00000012170) SLC7A1 (ENSBTAG00000018577) MTUS2 (ENSBTAG00000001094) ##13 POMP (ENSBTAG00000014024) #15 FLT1 (ENSBTAG00000016915) #19 PAN3 (ENSBTAG00000009912) #20 FLT3 (ENSBTAG00000018572) #22 URAD (ENSBTAG00000013819) CDX2 (ENSBTAG00000001819) #24 PDX1 (ENSBTAG00000010690) #25 GSX1 (ENSBTAG00000009166) #26 ENSBTAG00000048386 POLR1D (ENSBTAG00000008642) LNX2 (ENSBTAG00000015614) MTIF3 (ENSBTAG00000020530) GTF3A (ENSBTAG00000012600) RASL11A (ENSBTAG00000005244) RPL21 (ENSBTAG00000001648) USP12 (ENSBTAG00000017179) GPR12 (ENSBTAG00000010769) WASF3 (ENSBTAG00000014619) ENSBTAG00000049013 American bison MODERN SPECIES 3213 SLC46A3 (ENSBBBG00000012388) #14 POMP (ENSBBBG00000002357) #15 FLT1 (ENSBBBG00000012485) #19 PAN3 (ENSBBBG00000012554) #20 FLT3 (ENSBBBG00000012586) #22 URAD (ENSBBBG00000008107) #23 ENSBBBG00000012601 #24 PDX1 (ENSBBBG00000001839) #25 GSX1 (ENSBBBG00000001841) #26 ENSBBBG00000012613 POLR1D (ENSBBBG00000012618) LNX2 (ENSBBBG00000012639) ENSBBBG00000012643 GTF3A (ENSBBBG00000012669) RASL11A (ENSBBBG00000007545) ENSBBBG00000012692 USP12 (ENSBBBG00000002455) GPR12 (ENSBBBG00000012732) WASF3 (ENSBBBG00000002463) CDK8 (ENSBBBG00000001797) Siberian musk deer MODERN SPECIES 18 B3GLCT (ENSMMSG00000002053) HSPH1 (ENSMMSG00000002127) TEX26 (ENSMMSG00000002369) MEDAG (ENSMMSG00000002386) ALOX5AP (ENSMMSG00000002405) USPL1 (ENSMMSG00000002424) ENSMMSG00000002453 KATNAL1 (ENSMMSG00000002485) UBL3 (ENSMMSG00000002504) SLC7A1 (ENSMMSG00000002527) MTUS2 (ENSMMSG00000002573) ##13 SLC46A3 (ENSMMSG00000002652) #14 ENSMMSG00000002681 #15 FLT1 (ENSMMSG00000002716) #19 PAN3 (ENSMMSG00000002825) #20 FLT3 (ENSMMSG00000002901) #22 URAD (ENSMMSG00000002960) #23 CDX2 (ENSMMSG00000002973) #24 PDX1 (ENSMMSG00000002992) #25 ENSMMSG00000003007 GSX1 (ENSMMSG00000003020) #26 POLR1D (ENSMMSG00000003040) LNX2 (ENSMMSG00000003075) MTIF3 (ENSMMSG00000003094) ENSMMSG00000003107 RASL11A (ENSMMSG00000003132) ENSMMSG00000003141 USP12 (ENSMMSG00000003167) GPR12 (ENSMMSG00000003186) WASF3 (ENSMMSG00000003196) CDK8 (ENSMMSG00000003210) Yarkand deer MODERN SPECIES 23 MEDAG (ENSCHYG00000015182) ENSCHYG00000015226 ALOX5AP (ENSCHYG00000015250) USPL1 (ENSCHYG00000015344) ENSCHYG00000015436 KATNAL1 (ENSCHYG00000015536) UBL3 (ENSCHYG00000015723) SLC7A1 (ENSCHYG00000015804) MTUS2 (ENSCHYG00000016049) ##13 SLC46A3 (ENSCHYG00000016561) #14 ENSCHYG00000016630 #15 ENSCHYG00000016696 FLT1 (ENSCHYG00000016765) #19 PAN3 (ENSCHYG00000017249) #20 ENSCHYG00000017919 ##16 FLT3 (ENSCHYG00000017983) #22 URAD (ENSCHYG00000018294) #23 CDX2 (ENSCHYG00000018350) #24 PDX1 (ENSCHYG00000018394) #25 GSX1 (ENSCHYG00000018439) #26 ENSCHYG00000018475 ENSCHYG00000018627 LNX2 (ENSCHYG00000018648) MTIF3 (ENSCHYG00000018756) ENSCHYG00000018814 RASL11A (ENSCHYG00000019009) ENSCHYG00000019062 USP12 (ENSCHYG00000019156) GPR12 (ENSCHYG00000019276) WASF3 (ENSCHYG00000019331) CDK8 (ENSCHYG00000019544) Camelidae ANCESTRAL SPECIES 14 ENSGT00940000155499 ENSGT00940000159635 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Alpaca MODERN SPECIES 137 FLT1 (ENSVPAG00000006361) #19 PAN3 (ENSVPAG00000006357) #20 FLT3 (ENSVPAG00000006354) #22 Arabian camel MODERN SPECIES 5 HSPH1 (ENSCDRG00005005202) TEX26 (ENSCDRG00005005163) MEDAG (ENSCDRG00005005141) ALOX5AP (ENSCDRG00005005116) USPL1 (ENSCDRG00005005085) HMGB1 (ENSCDRG00005005045) KATNAL1 (ENSCDRG00005005025) UBL3 (ENSCDRG00005005011) SLC7A1 (ENSCDRG00005004941) ENSCDRG00005004898 ##13 ENSCDRG00005004864 ##13 SLC46A3 (ENSCDRG00005004813) #14 POMP (ENSCDRG00005004772) #15 FLT1 (ENSCDRG00005003978) #19 PAN3 (ENSCDRG00005003669) #20 FLT3 (ENSCDRG00005003607) #22 ENSCDRG00005003574 ENSCDRG00005003530 #24 PDX1 (ENSCDRG00005003496) #25 GSX1 (ENSCDRG00005003464) #26 POLR1D (ENSCDRG00005003401) LNX2 (ENSCDRG00005003360) MTIF3 (ENSCDRG00005003341) GTF3A (ENSCDRG00005021807) RASL11A (ENSCDRG00005021802) ENSCDRG00005021795 USP12 (ENSCDRG00005021790) GPR12 (ENSCDRG00005021787) WASF3 (ENSCDRG00005021785) CDK8 (ENSCDRG00005021779) RNF6 (ENSCDRG00005021774) Laurasiatheria_b ANCESTRAL SPECIES 21 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Carnivora ANCESTRAL SPECIES 23 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Caniformia ANCESTRAL SPECIES 24 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Caniformia_b ANCESTRAL SPECIES 26 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Ursidae ANCESTRAL SPECIES 27 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Ursus ANCESTRAL SPECIES 57 ENSGT00940000159635 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Polar bear MODERN SPECIES 177 HSPH1 (ENSUMAG00000017368) TEX26 (ENSUMAG00000017213) MEDAG (ENSUMAG00000017210) ENSUMAG00000017201 USPL1 (ENSUMAG00000017198) ENSUMAG00000017165 KATNAL1 (ENSUMAG00000017153) UBL3 (ENSUMAG00000017145) SLC7A1 (ENSUMAG00000017056) ENSUMAG00000017046 ##13 SLC46A3 (ENSUMAG00000017030) #14 POMP (ENSUMAG00000017026) #15 ENSUMAG00000017006 #19 ENSUMAG00000017000 PAN3 (ENSUMAG00000016986) #20 FLT3 (ENSUMAG00000016979) #22 ENSUMAG00000016976 #24 ENSUMAG00000016971 POLR1D (ENSUMAG00000016968) LNX2 (ENSUMAG00000016959) MTIF3 (ENSUMAG00000016954) GTF3A (ENSUMAG00000016941) RASL11A (ENSUMAG00000016927) ENSUMAG00000016908 ENSUMAG00000016903 ENSUMAG00000016901 USP12 (ENSUMAG00000016883) GPR12 (ENSUMAG00000016877) WASF3 (ENSUMAG00000016859) CDK8 (ENSUMAG00000016849) RNF6 (ENSUMAG00000016848) American black bear MODERN SPECIES 663 FLT3 (ENSUAMG00000023222) #22 ENSUAMG00000023221 CDX2 (ENSUAMG00000023217) #24 PDX1 (ENSUAMG00000023216) #25 GSX1 (ENSUAMG00000023215) #26 Giant Panda MODERN SPECIES 17 B3GLCT (ENSAMEG00000008757) HSPH1 (ENSAMEG00000008784) ENSAMEG00000008833 TEX26 (ENSAMEG00000008839) MEDAG (ENSAMEG00000008847) ALOX5AP (ENSAMEG00000023710) ENSAMEG00000008873 ENSAMEG00000008885 UBL3 (ENSAMEG00000008894) SLC7A1 (ENSAMEG00000008899) MTUS2 (ENSAMEG00000008934) ##13 SLC46A3 (ENSAMEG00000008953) #14 ENSAMEG00000008961 #15 FLT1 (ENSAMEG00000002209) #19 PAN3 (ENSAMEG00000002349) #20 FLT3 (ENSAMEG00000002354) #22 ENSAMEG00000031229 CDX2 (ENSAMEG00000029013) #24 PDX1 (ENSAMEG00000025378) #25 GSX1 (ENSAMEG00000030161) #26 ENSAMEG00000028974 LNX2 (ENSAMEG00000015845) MTIF3 (ENSAMEG00000015841) GTF3A (ENSAMEG00000015824) ENSAMEG00000029656 RASL11A (ENSAMEG00000015812) RPL21 (ENSAMEG00000031074) USP12 (ENSAMEG00000001863) ENSAMEG00000024690 GPR12 (ENSAMEG00000019402) WASF3 (ENSAMEG00000001835) Mustelinae ANCESTRAL SPECIES 109 ENSGT00940000162967 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 Ferret MODERN SPECIES 364 TEX26 (ENSMPUG00000004539) MEDAG (ENSMPUG00000004549) ALOX5AP (ENSMPUG00000004556) USPL1 (ENSMPUG00000004564) HMGB1 (ENSMPUG00000004579) KATNAL1 (ENSMPUG00000004610) ENSMPUG00000004620 UBL3 (ENSMPUG00000004638) SLC7A1 (ENSMPUG00000004649) MTUS2 (ENSMPUG00000004661) ##13 ENSMPUG00000004676 SLC46A3 (ENSMPUG00000004680) #14 POMP (ENSMPUG00000004690) #15 FLT1 (ENSMPUG00000004699) #19 PAN3 (ENSMPUG00000004987) #20 FLT3 (ENSMPUG00000005073) #22 ENSMPUG00000005088 CDX2 (ENSMPUG00000005092) #24 PDX1 (ENSMPUG00000005147) #25 GSX1 (ENSMPUG00000005153) #26 ENSMPUG00000005164 American mink MODERN SPECIES 346 S46A3 (ENSNVIG00000003179) #14 ENSNVIG00000003156 #15 FLT1 (ENSNVIG00000002982) #19 PAN3 (ENSNVIG00000002913) #20 FLT3 (ENSNVIG00000002880) #22 URAD (ENSNVIG00000002869) #23 CDX2 (ENSNVIG00000002864) #24 PDX1 (ENSNVIG00000002855) #25 GSX1 (ENSNVIG00000002846) #26 ENSNVIG00000002786 Canidae ANCESTRAL SPECIES 31 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000153425.a.a.b.a ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.a.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000153229.A.b #23 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Canis_lupus ANCESTRAL SPECIES 18 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000153425.a.a.b.a ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.a.b.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000011067.A.ib.b ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Dog MODERN SPECIES 17 TEX26 (ENSCAFG00845021671) MEDAG (ENSCAFG00845021735) ALOX5AP (ENSCAFG00845021804) USPL1 (ENSCAFG00845021869) HMGB1 (ENSCAFG00845021967) KATNAL1 (ENSCAFG00845022093) ENSCAFG00845022193 UBL3 (ENSCAFG00845022214) ENSCAFG00845022280 SLC7A1 (ENSCAFG00845022314) MTUS2 (ENSCAFG00845022435) ##13 SLC46A3 (ENSCAFG00845022832) #14 POMP (ENSCAFG00845022887) #15 FLT1 (ENSCAFG00845023188) #19 PAN3 (ENSCAFG00845023866) #20 FLT3 (ENSCAFG00845024412) #22 ENSCAFG00845025235 ENSCAFG00845025288 CDX2 (ENSCAFG00845025357) #24 PDX1 (ENSCAFG00845025401) #25 GSX1 (ENSCAFG00845025440) #26 POLR1D (ENSCAFG00845025499) LNX2 (ENSCAFG00845025569) MTIF3 (ENSCAFG00845025671) GTF3A (ENSCAFG00845025723) RASL11A (ENSCAFG00845025821) RPL21 (ENSCAFG00845025858) USP12 (ENSCAFG00845025960) ENSCAFG00845026031 GPR12 (ENSCAFG00845026068) WASF3 (ENSCAFG00845026110) Dingo MODERN SPECIES 304 ENSCAFG00020025123 ENSCAFG00020025133 ENSCAFG00020025137 KATNAL1 (ENSCAFG00020025138) ENSCAFG00020025145 UBL3 (ENSCAFG00020025147) ENSCAFG00020025149 SLC7A1 (ENSCAFG00020025151) MTUS2 (ENSCAFG00020025161) ##13 SLC46A3 (ENSCAFG00020025168) #14 ENSCAFG00020025169 ENSCAFG00020025170 ENSCAFG00020025171 #19 ENSCAFG00020025175 PAN3 (ENSCAFG00020025181) #20 FLT3 (ENSCAFG00020025240) #22 ENSCAFG00020025290 ENSCAFG00020025291 CDX2 (ENSCAFG00020025296) #24 PDX1 (ENSCAFG00020025298) #25 GSX1 (ENSCAFG00020025299) #26 ENSCAFG00020025301 LNX2 (ENSCAFG00020025302) MTIF3 (ENSCAFG00020025304) ENSCAFG00020025306 ENSCAFG00020025308 ENSCAFG00020025311 RASL11A (ENSCAFG00020025312) ENSCAFG00020025313 USP12 (ENSCAFG00020025315) GPR12 (ENSCAFG00020025316) Red fox MODERN SPECIES 22 TEX26 (ENSVVUG00000009744) MEDAG (ENSVVUG00000009731) ALOX5AP (ENSVVUG00000009718) USPL1 (ENSVVUG00000009708) HMGB1 (ENSVVUG00000009534) KATNAL1 (ENSVVUG00000009499) UBL3 (ENSVVUG00000009455) ENSVVUG00000009450 SLC7A1 (ENSVVUG00000009439) MTUS2 (ENSVVUG00000009413) ##13 SLC46A3 (ENSVVUG00000009403) #14 POMP (ENSVVUG00000009398) #15 FLT1 (ENSVVUG00000009356) #19 PAN3 (ENSVVUG00000009313) #20 ENSVVUG00000009307 #23 FLT3 (ENSVVUG00000009247) #22 CDX2 (ENSVVUG00000009237) #24 PDX1 (ENSVVUG00000009234) #25 ENSVVUG00000009233 GSX1 (ENSVVUG00000009230) #26 ENSVVUG00000009220 POLR1D (ENSVVUG00000009216) LNX2 (ENSVVUG00000009209) MTIF3 (ENSVVUG00000009207) GTF3A (ENSVVUG00000009197) RASL11A (ENSVVUG00000009191) RPL21 (ENSVVUG00000009183) USP12 (ENSVVUG00000009179) GPR12 (ENSVVUG00000009138) WASF3 (ENSVVUG00000009124) CDK8 (ENSVVUG00000009115) Felidae ANCESTRAL SPECIES 23 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Panthera ANCESTRAL SPECIES 21 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Panthera_a ANCESTRAL SPECIES 23 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 leopard MODERN SPECIES 14 ENSPPRG00000002151 TEX26 (ENSPPRG00000001047) MEDAG (ENSPPRG00000000734) ALOX5AP (ENSPPRG00000000293) USPL1 (ENSPPRG00000000053) HMGB1 (ENSPPRG00000022869) KATNAL1 (ENSPPRG00000022045) UBL3 (ENSPPRG00000019662) SLC7A1 (ENSPPRG00000017628) ENSPPRG00000016401 ##13 SLC46A3 (ENSPPRG00000015693) #14 POMP (ENSPPRG00000013840) #15 ENSPPRG00000013104 #19 ENSPPRG00000011363 PAN3 (ENSPPRG00000008505) #20 FLT3 (ENSPPRG00000005326) #22 ENSPPRG00000005097 CDX2 (ENSPPRG00000004823) #24 PDX1 (ENSPPRG00000004534) #25 GSX1 (ENSPPRG00000004333) #26 POLR1D (ENSPPRG00000003381) LNX2 (ENSPPRG00000002783) MTIF3 (ENSPPRG00000002497) GTF3A (ENSPPRG00000002368) RASL11A (ENSPPRG00000001350) ENSPPRG00000001012 USP12 (ENSPPRG00000000510) GPR12 (ENSPPRG00000017596) WASF3 (ENSPPRG00000022988) CDK8 (ENSPPRG00000023432) RNF6 (ENSPPRG00000024353) lion MODERN SPECIES 1 HSPH1 (ENSPLOG00000019185) ENSPLOG00000019458 TEX26 (ENSPLOG00000019557) MEDAG (ENSPLOG00000019748) ALOX5AP (ENSPLOG00000019807) USPL1 (ENSPLOG00000019841) ENSPLOG00000019888 KATNAL1 (ENSPLOG00000019942) UBL3 (ENSPLOG00000019992) SLC7A1 (ENSPLOG00000020023) ENSPLOG00000020066 ##13 SLC46A3 (ENSPLOG00000020203) #14 POMP (ENSPLOG00000020240) #15 FLT1 (ENSPLOG00000020410) #19 PAN3 (ENSPLOG00000020895) #20 FLT3 (ENSPLOG00000021081) #22 URAD (ENSPLOG00000021175) #23 CDX2 (ENSPLOG00000021193) #24 PDX1 (ENSPLOG00000021216) #25 GSX1 (ENSPLOG00000021227) #26 ENSPLOG00000021249 LNX2 (ENSPLOG00000021288) MTIF3 (ENSPLOG00000021318) GTF3A (ENSPLOG00000021339) RASL11A (ENSPLOG00000021369) ENSPLOG00000021394 USP12 (ENSPLOG00000004064) GPR12 (ENSPLOG00000004075) WASF3 (ENSPLOG00000004088) CDK8 (ENSPLOG00000004108) RNF6 (ENSPLOG00000004130) Tiger MODERN SPECIES 38 ENSPTIG00000016067 TEX26 (ENSPTIG00000017363) MEDAG (ENSPTIG00000018319) ALOX5AP (ENSPTIG00000019272) USPL1 (ENSPTIG00000019771) ENSPTIG00000020002 KATNAL1 (ENSPTIG00000020391) UBL3 (ENSPTIG00000020762) SLC7A1 (ENSPTIG00000021015) ENSPTIG00000001385 ##13 SLC46A3 (ENSPTIG00000005724) #14 POMP (ENSPTIG00000007181) #15 ENSPTIG00000007575 #19 ENSPTIG00000010147 PAN3 (ENSPTIG00000011675) #20 FLT3 (ENSPTIG00000013522) #22 ENSPTIG00000014998 #24 ENSPTIG00000016324 GSX1 (ENSPTIG00000016369) #26 ENSPTIG00000017320 POLR1D (ENSPTIG00000018137) LNX2 (ENSPTIG00000018500) MTIF3 (ENSPTIG00000018642) GTF3A (ENSPTIG00000018958) RASL11A (ENSPTIG00000019926) ENSPTIG00000020228 USP12 (ENSPTIG00000020368) GPR12 (ENSPTIG00000005107) WASF3 (ENSPTIG00000020649) CDK8 (ENSPTIG00000021301) RNF6 (ENSPTIG00000021628) Cat MODERN SPECIES HSPH1 (ENSFCAG00000007547) ENSFCAG00000031325 TEX26 (ENSFCAG00000024146) MEDAG (ENSFCAG00000007544) ALOX5AP (ENSFCAG00000037195) USPL1 (ENSFCAG00000022053) HMGB1 (ENSFCAG00000000200) KATNAL1 (ENSFCAG00000032001) UBL3 (ENSFCAG00000027217) SLC7A1 (ENSFCAG00000014326) MTUS2 (ENSFCAG00000014322) ##13 SLC46A3 (ENSFCAG00000008236) #14 POMP (ENSFCAG00000008235) #15 FLT1 (ENSFCAG00000013299) #19 PAN3 (ENSFCAG00000018643) #20 FLT3 (ENSFCAG00000004539) #22 ENSFCAG00000036126 CDX2 (ENSFCAG00000026699) #24 PDX1 (ENSFCAG00000034557) #25 GSX1 (ENSFCAG00000026793) #26 ENSFCAG00000030162 LNX2 (ENSFCAG00000011821) MTIF3 (ENSFCAG00000006985) GTF3A (ENSFCAG00000006982) RASL11A (ENSFCAG00000006749) ENSFCAG00000006750 USP12 (ENSFCAG00000026620) GPR12 (ENSFCAG00000014524) WASF3 (ENSFCAG00000009474) CDK8 (ENSFCAG00000027073) RNF6 (ENSFCAG00000011691) Laurasiatheria_c ANCESTRAL SPECIES 22 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104.m.b Chiroptera ANCESTRAL SPECIES 66 ENSGT00940000155499 ENSGT00940000159635 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104.m.a ENSGT00940000157104.m.b Microchiroptera ANCESTRAL SPECIES 46 ENSGT00940000155499 ENSGT00940000159635 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104.m.a ENSGT00940000157104.m.b Greater horseshoe bat MODERN SPECIES 22 HSPH1 (ENSRFEG00010000709) TEX26 (ENSRFEG00010000643) MEDAG (ENSRFEG00010000622) ALOX5AP (ENSRFEG00010000601) USPL1 (ENSRFEG00010000567) HMGB1 (ENSRFEG00010000531) KATNAL1 (ENSRFEG00010000476) UBL3 (ENSRFEG00010000414) SLC7A1 (ENSRFEG00010000293) ENSRFEG00010004420 MTUS2 (ENSRFEG00010004361) ##13 SLC46A3 (ENSRFEG00010004332) #14 ENSRFEG00010004318 #15 FLT1 (ENSRFEG00010004193) #19 PAN3 (ENSRFEG00010004077) #20 FLT3 (ENSRFEG00010004003) #22 ENSRFEG00010003975 CDX2 (ENSRFEG00010003965) #24 PDX1 (ENSRFEG00010003956) #25 GSX1 (ENSRFEG00010003946) #26 ENSRFEG00010003942 ENSRFEG00010003922 LNX2 (ENSRFEG00010003884) MTIF3 (ENSRFEG00010003873) GTF3A (ENSRFEG00010003845) RASL11A (ENSRFEG00010003821) ENSRFEG00010003789 USP12 (ENSRFEG00010003775) GPR12 (ENSRFEG00010003761) ENSRFEG00010003754 WASF3 (ENSRFEG00010003718) Microbat MODERN SPECIES 1164 SLC46A3 (ENSMLUG00000006699) #14 ENSMLUG00000010322 #15 FLT1 (ENSMLUG00000004358) #19 PAN3 (ENSMLUG00000004348) #20 FLT3 (ENSMLUG00000002582) #22 ENSMLUG00000002576 CDX2 (ENSMLUG00000002563) #24 PDX1 (ENSMLUG00000010639) #25 ENSMLUG00000025151 LNX2 (ENSMLUG00000010946) MTIF3 (ENSMLUG00000002161) GTF3A (ENSMLUG00000002158) RASL11A (ENSMLUG00000016335) ENSMLUG00000010093 USP12 (ENSMLUG00000007510) GPR12 (ENSMLUG00000002365) Megabat MODERN SPECIES 906 FLT3 (ENSPVAG00000011525) #22 ENSPVAG00000011523 CDX2 (ENSPVAG00000011522) #24 PDX1 (ENSPVAG00000011521) #25 Equus ANCESTRAL SPECIES 26 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734.j.b #15 ENSGT00940000158713 #19 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104.m.b Horse MODERN SPECIES 8 TEX26 (ENSECAG00000015300) MEDAG (ENSECAG00000014702) ALOX5AP (ENSECAG00000012371) USPL1 (ENSECAG00000011889) HMGB1 (ENSECAG00000008439) KATNAL1 (ENSECAG00000004830) UBL3 (ENSECAG00000001318) SLC7A1 (ENSECAG00000015413) MTUS2 (ENSECAG00000013935) ##13 SLC46A3 (ENSECAG00000011432) #14 ENSECAG00000048907 POMP (ENSECAG00000011951) #15 ENSECAG00000049171 #19 FLT1 (ENSECAG00000021700) PAN3 (ENSECAG00000014810) #20 FLT3 (ENSECAG00000002171) #22 ENSECAG00000002049 CDX2 (ENSECAG00000027754) #24 PDX1 (ENSECAG00000000679) #25 GSX1 (ENSECAG00000035168) #26 ENSECAG00000021095 LNX2 (ENSECAG00000017219) MTIF3 (ENSECAG00000016697) GTF3A (ENSECAG00000014803) RASL11A (ENSECAG00000012858) USP12 (ENSECAG00000006779) ENSECAG00000045376 ENSECAG00000036907 GPR12 (ENSECAG00000059623) WASF3 (ENSECAG00000000050) CDK8 (ENSECAG00000015515) Donkey MODERN SPECIES 29 ENSEASG00005022381 TEX26 (ENSEASG00005022387) MEDAG (ENSEASG00005022391) ALOX5AP (ENSEASG00005022395) USPL1 (ENSEASG00005022400) HMGB1 (ENSEASG00005032345) KATNAL1 (ENSEASG00005022416) UBL3 (ENSEASG00005022423) SLC7A1 (ENSEASG00005022432) MTUS2 (ENSEASG00005022449) ##13 SLC46A3 (ENSEASG00005022457) #14 ENSEASG00005029421 #15 ENSEASG00005022461 #19 ENSEASG00005029804 PAN3 (ENSEASG00005022467) #20 FLT3 (ENSEASG00005022471) #22 ENSEASG00005003450 ENSEASG00005028208 CDX2 (ENSEASG00005022479) #24 PDX1 (ENSEASG00005022482) #25 GSX1 (ENSEASG00005022483) #26 ENSEASG00005035501 POLR1D (ENSEASG00005022487) LNX2 (ENSEASG00005022490) MTIF3 (ENSEASG00005022492) ENSEASG00005022495 RASL11A (ENSEASG00005034471) ENSEASG00005022501 USP12 (ENSEASG00005022511) GPR12 (ENSEASG00005035884) WASF3 (ENSEASG00005022517) Eulipotyphla ANCESTRAL SPECIES ENSGT00940000160575 #22 Hedgehog MODERN SPECIES 2226 FLT3 (ENSEEUG00000009552) #22 Common shrew MODERN SPECIES 1608 FLT3 (ENSSARG00000010421) #22 Atlantogenata ANCESTRAL SPECIES 27 ENSGT00940000162967 ENSGT00740000117041 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 Xenarthra ANCESTRAL SPECIES 208 ENSGT00970000194118 ENSGT00940000164144 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a Sloth MODERN SPECIES 1933 FLT3 (ENSCHOG00000013520) #22 Armadillo MODERN SPECIES 1567 ENSDNOG00000031980 SLC46A3 (ENSDNOG00000000330) #14 ENSDNOG00000036523 ENSDNOG00000031252 PAN3 (ENSDNOG00000017391) #20 FLT3 (ENSDNOG00000001582) #22 ENSDNOG00000046210 CDX2 (ENSDNOG00000035260) #24 PDX1 (ENSDNOG00000003213) #25 GSX1 (ENSDNOG00000011821) #26 ENSDNOG00000044869 ENSDNOG00000043676 LNX2 (ENSDNOG00000006927) MTIF3 (ENSDNOG00000037641) ENSDNOG00000037405 ENSDNOG00000041047 RASL11A (ENSDNOG00000010166) ENSDNOG00000043479 GPR12 (ENSDNOG00000017683) WASF3 (ENSDNOG00000002618) Afrotheria ANCESTRAL SPECIES 89 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000165049 ENSGT00940000157443 Afrotheria_a ANCESTRAL SPECIES 90 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.e.b.a.a.a ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00390000003643 ENSGT00550000075160 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000165049 ENSGT00940000157443 Elephant MODERN SPECIES 294 GPR18 (ENSLAFG00000007667) UBAC2 (ENSLAFG00000007662) TEX26 (ENSLAFG00000025765) MEDAG (ENSLAFG00000018412) ALOX5AP (ENSLAFG00000018481) USPL1 (ENSLAFG00000007634) HMGB1 (ENSLAFG00000000269) KATNAL1 (ENSLAFG00000003140) UBL3 (ENSLAFG00000000781) SLC7A1 (ENSLAFG00000016186) ENSLAFG00000016168 ##13 SLC46A3 (ENSLAFG00000009925) #14 POMP (ENSLAFG00000003665) #15 FLT1 (ENSLAFG00000015622) #19 PAN3 (ENSLAFG00000015614) #20 FLT3 (ENSLAFG00000015599) #22 CDX2 (ENSLAFG00000030146) #24 ENSLAFG00000022071 POLR1D (ENSLAFG00000032290) LNX2 (ENSLAFG00000015044) MTIF3 (ENSLAFG00000015496) GTF3A (ENSLAFG00000027315) RASL11A (ENSLAFG00000003673) ENSLAFG00000003677 USP12 (ENSLAFG00000007202) ENSLAFG00000028761 GPR12 (ENSLAFG00000014464) WASF3 (ENSLAFG00000018395) CDK8 (ENSLAFG00000006771) RNF6 (ENSLAFG00000029161) ENSLAFG00000030917 Hyrax MODERN SPECIES 1729 ENSPCAG00000006704 #22 Tenrec MODERN SPECIES 2138 FLT3 (ENSETEG00000001983) #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.f ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00940000164144.g ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.m Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.f ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00940000164144.g ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.u ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.m Diprotodontia ANCESTRAL SPECIES 11 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.f ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00940000164144.g ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.u ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.m Diprotodontia_a ANCESTRAL SPECIES 9 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.f ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00940000164144.g ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.u ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530.m koala MODERN SPECIES 66 ENSPCIG00000012206 MEDAG (ENSPCIG00000012205) ALOX5AP (ENSPCIG00000019847) USPL1 (ENSPCIG00000019844) ENSPCIG00000021432 KATNAL1 (ENSPCIG00000021438) UBL3 (ENSPCIG00000003332) SLC7A1 (ENSPCIG00000003318) MTUS2 (ENSPCIG00000003294) ##13 SLC46A3 (ENSPCIG00000022153) #14 ENSPCIG00000022156 #15 ENSPCIG00000032952 ENSPCIG00000036587 #19 ENSPCIG00000022165 PAN3 (ENSPCIG00000022181) #20 FLT3 (ENSPCIG00000022190) #22 ENSPCIG00000022197 CDX2 (ENSPCIG00000022200) #24 PDX1 (ENSPCIG00000022204) #25 GSX1 (ENSPCIG00000022205) #26 ENSPCIG00000022208 LNX2 (ENSPCIG00000022213) MTIF3 (ENSPCIG00000022222) GTF3A (ENSPCIG00000022226) RASL11A (ENSPCIG00000031842) RPL21 (ENSPCIG00000022238) USP12 (ENSPCIG00000022249) GPR12 (ENSPCIG00000023230) WASF3 (ENSPCIG00000037264) CDK8 (ENSPCIG00000017352) RNF6 (ENSPCIG00000026870) Common wonbat MODERN SPECIES 1049 ENSVURG00010020246 MEDAG (ENSVURG00010020258) ALOX5AP (ENSVURG00010020266) ENSVURG00010020274 ENSVURG00010020283 KATNAL1 (ENSVURG00010020293) ENSVURG00010020303 UBL3 (ENSVURG00010020310) SLC7A1 (ENSVURG00010020318) ENSVURG00010020337 ##13 ENSVURG00010020380 SLC46A3 (ENSVURG00010020388) #14 POMP (ENSVURG00010020395) #15 FLT1 (ENSVURG00010020423) #19 PAN3 (ENSVURG00010020471) #20 FLT3 (ENSVURG00010020490) #22 ENSVURG00010020509 CDX2 (ENSVURG00010020516) #24 PDX1 (ENSVURG00010020518) #25 ENSVURG00010020522 GSX1 (ENSVURG00010020523) #26 ENSVURG00010020531 LNX2 (ENSVURG00010020536) ENSVURG00010020547 ENSVURG00010020554 RASL11A (ENSVURG00010020566) ENSVURG00010020571 ENSVURG00010020587 WASF3 (ENSVURG00010020608) CDK8 (ENSVURG00010020617) RNF6 (ENSVURG00010020625) Wallaby MODERN SPECIES 8947 ENSMEUG00000015187 #22 Tasmanian devil MODERN SPECIES 2 HSPH1 (ENSSHAG00000016697) ENSSHAG00000016069 MEDAG (ENSSHAG00000027393) ALOX5AP (ENSSHAG00000015184) ENSSHAG00000014789 ENSSHAG00000014034 KATNAL1 (ENSSHAG00000025350) UBL3 (ENSSHAG00000026625) SLC7A1 (ENSSHAG00000005902) MTUS2 (ENSSHAG00000003528) ##13 SLC46A3 (ENSSHAG00000018516) #14 POMP (ENSSHAG00000030814) #15 ENSSHAG00000018212 #19 ENSSHAG00000029371 PAN3 (ENSSHAG00000018065) #20 FLT3 (ENSSHAG00000017900) #22 ENSSHAG00000024737 CDX2 (ENSSHAG00000017862) #24 ENSSHAG00000017812 GSX1 (ENSSHAG00000029989) #26 ENSSHAG00000025491 LNX2 (ENSSHAG00000017242) ENSSHAG00000017006 GTF3A (ENSSHAG00000016965) RASL11A (ENSSHAG00000016468) RPL21 (ENSSHAG00000000845) USP12 (ENSSHAG00000016123) GPR12 (ENSSHAG00000030631) WASF3 (ENSSHAG00000013579) CDK8 (ENSSHAG00000012149) ENSSHAG00000011392 Opossum MODERN SPECIES 3 ENSMODG00000041498 MEDAG (ENSMODG00000009294) ALOX5AP (ENSMODG00000009265) ENSMODG00000009262 ENSMODG00000009238 ENSMODG00000048360 KATNAL1 (ENSMODG00000009220) UBL3 (ENSMODG00000037463) ENSMODG00000009203 SLC7A1 (ENSMODG00000009198) MTUS2 (ENSMODG00000009167) ##13 SLC46A3 (ENSMODG00000009152) #14 POMP (ENSMODG00000009139) #15 FLT1 (ENSMODG00000009128) #19 PAN3 (ENSMODG00000009065) #20 FLT3 (ENSMODG00000009045) #22 URAD (ENSMODG00000039216) CDX2 (ENSMODG00000009021) #24 ENSMODG00000009015 GSX1 (ENSMODG00000009010) #26 ENSMODG00000047217 LNX2 (ENSMODG00000008989) ENSMODG00000050662 ENSMODG00000008962 GTF3A (ENSMODG00000008955) RASL11A (ENSMODG00000008941) RPL21 (ENSMODG00000008923) ENSMODG00000008874 WASF3 (ENSMODG00000008795) CDK8 (ENSMODG00000008753) RNF6 (ENSMODG00000038831) Platypus MODERN SPECIES 12 ENSOANG00000015473 TEX26 (ENSOANG00000046294) MEDAG (ENSOANG00000039210) ALOX5AP (ENSOANG00000040345) ENSOANG00000014720 ENSOANG00000048910 ENSOANG00000014719 KATNAL1 (ENSOANG00000014718) UBL3 (ENSOANG00000039422) SLC7A1 (ENSOANG00000041862) ENSOANG00000048575 ##13 SLC46A3 (ENSOANG00000015257) #14 POMP (ENSOANG00000050524) #15 FLT1 (ENSOANG00000009071) #19 PAN3 (ENSOANG00000009070) #20 ENSOANG00000045061 #22 ENSOANG00000009066 ENSOANG00000043986 #24 ENSOANG00000009064 GSX1 (ENSOANG00000040381) #26 ENSOANG00000051147 LNX2 (ENSOANG00000009060) ENSOANG00000009057 GTF3A (ENSOANG00000038706) RASL11A (ENSOANG00000009056) ENSOANG00000009054 USP12 (ENSOANG00000009053) GPR12 (ENSOANG00000009052) WASF3 (ENSOANG00000009051) CDK8 (ENSOANG00000009050) ATP8A2 (ENSOANG00000009049) Sauria ANCESTRAL SPECIES 2 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000178537 Archelosauria ANCESTRAL SPECIES ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000178537 Archosauria ANCESTRAL SPECIES 2 ENSGT00940000162967 ENSGT00960000190702 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Aves ANCESTRAL SPECIES ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000162967 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Neognathae ANCESTRAL SPECIES 1 ENSGT00940000158948.b ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Galloanserae ANCESTRAL SPECIES 1 ENSGT00940000158948.b ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Anatidae ANCESTRAL SPECIES 16 ENSGT00610000086058.b ENSGT00940000158948.b ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Pink-footed goose MODERN SPECIES 66 FRY (ENSABRG00000014418) RXFP2 (ENSABRG00000020009) B3GLCT (ENSABRG00000020013) HSPH1 (ENSABRG00000020015) ALOX5AP (ENSABRG00000020028) USPL1 (ENSABRG00000020031) ENSABRG00000020036 KATNAL1 (ENSABRG00000020047) UBL3 (ENSABRG00000020066) SLC7A1 (ENSABRG00000020071) MTUS2 (ENSABRG00000020080) ##13 SLC46A3 (ENSABRG00000020099) #14 POMP (ENSABRG00000020108) #15 FLT1 (ENSABRG00000020130) #19 PAN3 (ENSABRG00000020145) #20 FLT3 (ENSABRG00000020154) #22 CDX2 (ENSABRG00000020167) #24 ENSABRG00000020168 GSX1 (ENSABRG00000020173) #26 ENSABRG00000020175 LNX2 (ENSABRG00000020178) MTIF3 (ENSABRG00000020183) GTF3A (ENSABRG00000020186) RASL11A (ENSABRG00000020194) RPL21 (ENSABRG00000020198) USP12 (ENSABRG00000020207) GPR12 (ENSABRG00000020211) WASF3 (ENSABRG00000020213) CDK8 (ENSABRG00000020224) RNF6 (ENSABRG00000020261) ATP8A2 (ENSABRG00000020282) Duck MODERN SPECIES FRY (ENSAPLG00000006519) RXFP2 (ENSAPLG00000006226) B3GLCT (ENSAPLG00000006024) HSPH1 (ENSAPLG00000005104) ALOX5AP (ENSAPLG00000004149) USPL1 (ENSAPLG00000003991) ENSAPLG00000030014 KATNAL1 (ENSAPLG00000003805) UBL3 (ENSAPLG00000020134) SLC7A1 (ENSAPLG00000008545) MTUS2 (ENSAPLG00000008305) ##13 SLC46A3 (ENSAPLG00000008223) #14 POMP (ENSAPLG00000008213) #15 FLT1 (ENSAPLG00000006689) #19 PAN3 (ENSAPLG00000006496) #20 FLT3 (ENSAPLG00000005989) #22 CDX2 (ENSAPLG00000020255) #24 ENSAPLG00000026245 GSX1 (ENSAPLG00000024317) #26 ENSAPLG00000005977 LNX2 (ENSAPLG00000005445) MTIF3 (ENSAPLG00000006117) ENSAPLG00000005957 RASL11A (ENSAPLG00000017444) RPL21 (ENSAPLG00000005641) USP12 (ENSAPLG00000005359) GPR12 (ENSAPLG00000001069) WASF3 (ENSAPLG00000005025) CDK8 (ENSAPLG00000009252) RNF6 (ENSAPLG00000009544) ATP8A2 (ENSAPLG00000009563) Phasianidae ANCESTRAL SPECIES ENSGT00610000086058.b ENSGT00940000155499 ENSGT00940000159635.q ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00910000147887 #21 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643.a ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Phasianidae_b ANCESTRAL SPECIES ENSGT00390000012305.b ENSGT00610000086058.b ENSGT00940000155499 ENSGT00940000159635.q ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643.a ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Chicken MODERN SPECIES ZAR1L (ENSGALG00010006752) FRY (ENSGALG00010006835) B3GLCT (ENSGALG00010006903) HSPH1 (ENSGALG00010006913) ALOX5AP (ENSGALG00010006942) USPL1 (ENSGALG00010006988) HMGB1 (ENSGALG00010007011) KATNAL1 (ENSGALG00010007028) UBL3 (ENSGALG00010007070) SLC7A1 (ENSGALG00010007106) ENSGALG00010007162 ##13 SLC46A3 (ENSGALG00010005042) #14 POMP (ENSGALG00010005060) #15 FLT1 (ENSGALG00010005282) #19 PAN3 (ENSGALG00010005296) #20 FLT3 (ENSGALG00010004758) #22 CDX2 (ENSGALG00010004589) #24 ENSGALG00010004598 GSX1 (ENSGALG00010004613) #26 ENSGALG00010005082 LNX2 (ENSGALG00010005132) MTIF3 (ENSGALG00010005123) GTF3A (ENSGALG00010005143) RASL11A (ENSGALG00010005784) RPL21 (ENSGALG00010005785) USP12 (ENSGALG00010005830) GPR12 (ENSGALG00010005843) WASF3 (ENSGALG00010005848) CDK8 (ENSGALG00010005875) RNF6 (ENSGALG00010005891) ATP8A2 (ENSGALG00010005935) Turkey MODERN SPECIES ENSMGAG00000015110 ENSMGAG00000015109 ENSMGAG00000015108 ENSMGAG00000021988 ENSMGAG00000015597 ENSMGAG00000015107 USP12 (ENSMGAG00000015106) ENSMGAG00000015105 ENSMGAG00000019583 ENSMGAG00000015101 ENSMGAG00000015102 LNX2 (ENSMGAG00000015103) ENSMGAG00000019450 ENSMGAG00000021200 ENSMGAG00000018257 #24 ENSMGAG00000015097 #22 ENSMGAG00000015096 #20 ENSMGAG00000015095 ENSMGAG00000018803 #19 ENSMGAG00000015093 #14 ENSMGAG00000015094 #15 ENSMGAG00000015091 ##13 ENSMGAG00000015090 ENSMGAG00000007304 ##13 UBL3 (ENSMGAG00000020600) ENSMGAG00000015088 ENSMGAG00000015087 ENSMGAG00000015085 ENSMGAG00000015086 ENSMGAG00000015083 ENSMGAG00000021510 Japanese quail MODERN SPECIES FRY (ENSCJPG00005020415) B3GLCT (ENSCJPG00005020417) HSPH1 (ENSCJPG00005020418) ALOX5AP (ENSCJPG00005020419) USPL1 (ENSCJPG00005020420) ENSCJPG00005020423 KATNAL1 (ENSCJPG00005020425) UBL3 (ENSCJPG00005020426) SLC7A1 (ENSCJPG00005020427) MTUS2 (ENSCJPG00005020428) ##13 SLC46A3 (ENSCJPG00005020429) #14 POMP (ENSCJPG00005020430) #15 FLT1 (ENSCJPG00005020431) #19 ENSCJPG00005020432 #21 PAN3 (ENSCJPG00005020433) #20 FLT3 (ENSCJPG00005020434) #22 CDX2 (ENSCJPG00005020437) #24 ENSCJPG00005020438 GSX1 (ENSCJPG00005020440) #26 ENSCJPG00005020444 LNX2 (ENSCJPG00005020445) MTIF3 (ENSCJPG00005020447) GTF3A (ENSCJPG00005020448) RASL11A (ENSCJPG00005020451) RPL21 (ENSCJPG00005000787) USP12 (ENSCJPG00005000797) GPR12 (ENSCJPG00005000813) WASF3 (ENSCJPG00005000831) CDK8 (ENSCJPG00005000850) RNF6 (ENSCJPG00005000859) ATP8A2 (ENSCJPG00005000945) Neognathae_b ANCESTRAL SPECIES ENSGT00390000012305.b ENSGT00610000086058.b ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Neognathae_c ANCESTRAL SPECIES 11 ENSGT00390000012305.b ENSGT00610000086058.b ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Golden eagle MODERN SPECIES 10 FRY (ENSACCG00020014960) B3GLCT (ENSACCG00020015407) HSPH1 (ENSACCG00020015450) ENSACCG00020015479 ALOX5AP (ENSACCG00020015490) USPL1 (ENSACCG00020015509) ENSACCG00020015526 KATNAL1 (ENSACCG00020015538) UBL3 (ENSACCG00020015554) SLC7A1 (ENSACCG00020015572) MTUS2 (ENSACCG00020015600) ##13 SLC46A3 (ENSACCG00020015624) #14 POMP (ENSACCG00020015647) #15 FLT1 (ENSACCG00020015689) #19 PAN3 (ENSACCG00020015728) #20 FLT3 (ENSACCG00020015779) #22 CDX2 (ENSACCG00020015840) #24 ENSACCG00020015849 GSX1 (ENSACCG00020015856) #26 ENSACCG00020015871 LNX2 (ENSACCG00020015880) MTIF3 (ENSACCG00020015893) GTF3A (ENSACCG00020015904) RASL11A (ENSACCG00020015924) RPL21 (ENSACCG00020015935) USP12 (ENSACCG00020015953) GPR12 (ENSACCG00020015967) WASF3 (ENSACCG00020015986) CDK8 (ENSACCG00020016007) ENSACCG00020016028 ATP8A2 (ENSACCG00020016509) Kakapo MODERN SPECIES 11 ZAR1L (ENSSHBG00005014049) FRY (ENSSHBG00005014192) B3GLCT (ENSSHBG00005014739) HSPH1 (ENSSHBG00005015715) ALOX5AP (ENSSHBG00005015727) USPL1 (ENSSHBG00005015735) ENSSHBG00005015756 KATNAL1 (ENSSHBG00005015762) UBL3 (ENSSHBG00005015767) SLC7A1 (ENSSHBG00005015784) MTUS2 (ENSSHBG00005015801) ##13 SLC46A3 (ENSSHBG00005009851) #14 POMP (ENSSHBG00005009882) #15 FLT1 (ENSSHBG00005009961) #19 PAN3 (ENSSHBG00005010335) #20 FLT3 (ENSSHBG00005013018) #22 CDX2 (ENSSHBG00005013047) #24 ENSSHBG00005013057 GSX1 (ENSSHBG00005013067) #26 ENSSHBG00005013073 LNX2 (ENSSHBG00005013084) MTIF3 (ENSSHBG00005013103) GTF3A (ENSSHBG00005013114) RASL11A (ENSSHBG00005013133) RPL21 (ENSSHBG00005013149) ENSSHBG00005013174 ENSSHBG00005013185 GPR12 (ENSSHBG00005013192) WASF3 (ENSSHBG00005013203) CDK8 (ENSSHBG00005013211) RNF6 (ENSSHBG00005013216) Passeriformes ANCESTRAL SPECIES 1 ENSGT00390000012305.b ENSGT00610000086058.b ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.x.a ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00390000012305.b ENSGT00610000086058.b ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.x.a ENSGT00940000155647.w ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Flycatcher MODERN SPECIES ZAR1L (ENSFALG00000008466) FRY (ENSFALG00000008469) B3GLCT (ENSFALG00000008485) HSPH1 (ENSFALG00000008492) ALOX5AP (ENSFALG00000008494) USPL1 (ENSFALG00000008499) ENSFALG00000008507 KATNAL1 (ENSFALG00000008512) UBL3 (ENSFALG00000008516) SLC7A1 (ENSFALG00000008521) MTUS2 (ENSFALG00000008535) ##13 SLC46A3 (ENSFALG00000008538) #14 POMP (ENSFALG00000008541) #15 FLT1 (ENSFALG00000008542) #19 PAN3 (ENSFALG00000008554) #20 FLT3 (ENSFALG00000008570) #22 ENSFALG00000025892 CDX2 (ENSFALG00000014799) #24 ENSFALG00000008588 GSX1 (ENSFALG00000028458) #26 ENSFALG00000023517 LNX2 (ENSFALG00000008604) MTIF3 (ENSFALG00000008612) ENSFALG00000025967 ENSFALG00000008614 RASL11A (ENSFALG00000025266) RPL21 (ENSFALG00000027093) USP12 (ENSFALG00000008645) WASF3 (ENSFALG00000008659) RNF6 (ENSFALG00000008663) ENSFALG00000008667 Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00390000012305.b ENSGT00610000086058.b ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.w ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Passeroidea ANCESTRAL SPECIES 5 ENSGT00390000012305.b ENSGT00610000086058.b ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647.w ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Zebra finch MODERN SPECIES ZAR1L (ENSTGUG00000011760) FRY (ENSTGUG00000011735) B3GLCT (ENSTGUG00000011725) HSPH1 (ENSTGUG00000011712) ALOX5AP (ENSTGUG00000011710) USPL1 (ENSTGUG00000011708) HMGB1 (ENSTGUG00000022860) KATNAL1 (ENSTGUG00000011690) UBL3 (ENSTGUG00000023373) SLC7A1 (ENSTGUG00000011671) MTUS2 (ENSTGUG00000011664) ##13 SLC46A3 (ENSTGUG00000011660) #14 POMP (ENSTGUG00000019231) #15 FLT1 (ENSTGUG00000011631) #19 PAN3 (ENSTGUG00000011627) #20 FLT3 (ENSTGUG00000011607) #22 CDX2 (ENSTGUG00000024715) #24 ENSTGUG00000011604 GSX1 (ENSTGUG00000011603) #26 ENSTGUG00000026413 LNX2 (ENSTGUG00000011590) MTIF3 (ENSTGUG00000011587) GTF3A (ENSTGUG00000011584) RASL11A (ENSTGUG00000011581) RPL21 (ENSTGUG00000011571) USP12 (ENSTGUG00000011564) GPR12 (ENSTGUG00000029743) WASF3 (ENSTGUG00000011551) CDK8 (ENSTGUG00000011534) RNF6 (ENSTGUG00000011529) ATP8A2 (ENSTGUG00000011487) Common canary MODERN SPECIES 4 FRY (ENSSCAG00000008591) B3GLCT (ENSSCAG00000008506) HSPH1 (ENSSCAG00000006925) ALOX5AP (ENSSCAG00000006720) USPL1 (ENSSCAG00000006715) ENSSCAG00000006705 KATNAL1 (ENSSCAG00000006695) UBL3 (ENSSCAG00000006691) SLC7A1 (ENSSCAG00000006665) MTUS2 (ENSSCAG00000006627) ##13 ENSSCAG00000006607 SLC46A3 (ENSSCAG00000006605) #14 POMP (ENSSCAG00000006603) #15 FLT1 (ENSSCAG00000006594) #19 PAN3 (ENSSCAG00000006588) #20 FLT3 (ENSSCAG00000006561) #22 CDX2 (ENSSCAG00000006556) #24 ENSSCAG00000006555 GSX1 (ENSSCAG00000006551) #26 ENSSCAG00000006550 LNX2 (ENSSCAG00000006544) MTIF3 (ENSSCAG00000006540) GTF3A (ENSSCAG00000006534) RASL11A (ENSSCAG00000006526) RPL21 (ENSSCAG00000006515) USP12 (ENSSCAG00000006508) GPR12 (ENSSCAG00000006491) WASF3 (ENSSCAG00000006489) CDK8 (ENSSCAG00000006481) RNF6 (ENSSCAG00000006466) ATP8A2 (ENSSCAG00000006152) Medium ground finch MODERN SPECIES 5 UBL3 (ENSGFOG00000001249) SLC7A1 (ENSGFOG00000001256) ENSGFOG00000001267 ##13 ENSGFOG00000001274 ##13 SLC46A3 (ENSGFOG00000001284) #14 POMP (ENSGFOG00000001287) #15 FLT1 (ENSGFOG00000001313) #19 PAN3 (ENSGFOG00000001517) #20 FLT3 (ENSGFOG00000001547) #22 ENSGFOG00000001641 ENSGFOG00000001645 ENSGFOG00000001647 LNX2 (ENSGFOG00000001652) ENSGFOG00000001662 GTF3A (ENSGFOG00000001665) RASL11A (ENSGFOG00000001674) RPL21 (ENSGFOG00000001678) USP12 (ENSGFOG00000001695) GPR12 (ENSGFOG00000001711) WASF3 (ENSGFOG00000001716) CDK8 (ENSGFOG00000001743) RNF6 (ENSGFOG00000001799) ATP8A2 (ENSGFOG00000001991) NUP58 (ENSGFOG00000006395) Great tit MODERN SPECIES ZAR1L (ENSPMJG00000015024) FRY (ENSPMJG00000015047) B3GLCT (ENSPMJG00000017445) HSPH1 (ENSPMJG00000017446) ALOX5AP (ENSPMJG00000017448) USPL1 (ENSPMJG00000017450) ENSPMJG00000017453 KATNAL1 (ENSPMJG00000017454) UBL3 (ENSPMJG00000017458) SLC7A1 (ENSPMJG00000017459) MTUS2 (ENSPMJG00000017469) ##13 SLC46A3 (ENSPMJG00000017471) #14 POMP (ENSPMJG00000017472) #15 FLT1 (ENSPMJG00000017473) #19 PAN3 (ENSPMJG00000017474) #20 FLT3 (ENSPMJG00000017475) #22 CDX2 (ENSPMJG00000017476) #24 ENSPMJG00000017477 GSX1 (ENSPMJG00000017478) #26 ENSPMJG00000017479 LNX2 (ENSPMJG00000017480) ENSPMJG00000017481 GTF3A (ENSPMJG00000017482) RASL11A (ENSPMJG00000017485) RPL21 (ENSPMJG00000017486) USP12 (ENSPMJG00000017489) GPR12 (ENSPMJG00000017490) WASF3 (ENSPMJG00000017491) ENSPMJG00000017492 RNF6 (ENSPMJG00000017493) ATP8A2 (ENSPMJG00000017494) African ostrich MODERN SPECIES 1023 ENSSCUG00000014652 B3GLCT (ENSSCUG00000014653) HSPH1 (ENSSCUG00000014684) ENSSCUG00000014800 ALOX5AP (ENSSCUG00000014811) USPL1 (ENSSCUG00000014817) ENSSCUG00000014823 KATNAL1 (ENSSCUG00000014834) UBL3 (ENSSCUG00000014850) SLC7A1 (ENSSCUG00000014867) MTUS2 (ENSSCUG00000014886) ##13 SLC46A3 (ENSSCUG00000014897) #14 POMP (ENSSCUG00000014902) #15 FLT1 (ENSSCUG00000014934) #19 PAN3 (ENSSCUG00000014968) #20 FLT3 (ENSSCUG00000014991) #22 ENSSCUG00000014998 ENSSCUG00000015006 LNX2 (ENSSCUG00000015009) MTIF3 (ENSSCUG00000015015) GTF3A (ENSSCUG00000015016) RASL11A (ENSSCUG00000015022) RPL21 (ENSSCUG00000015026) USP12 (ENSSCUG00000015037) GPR12 (ENSSCUG00000015043) WASF3 (ENSSCUG00000015048) CDK8 (ENSSCUG00000015060) RNF6 (ENSSCUG00000015076) ATP8A2 (ENSSCUG00000015083) SHISA2 (ENSSCUG00000015106) NUP58 (ENSSCUG00000015110) Australian saltwater crocodile MODERN SPECIES 27 ENSCPRG00005011697 ENSCPRG00005011705 ENSCPRG00005011707 MEDAG (ENSCPRG00005011713) ALOX5AP (ENSCPRG00005011719) USPL1 (ENSCPRG00005011746) ENSCPRG00005011754 KATNAL1 (ENSCPRG00005011821) UBL3 (ENSCPRG00005011867) SLC7A1 (ENSCPRG00005011893) MTUS2 (ENSCPRG00005011961) ##13 SLC46A3 (ENSCPRG00005012148) #14 POMP (ENSCPRG00005012162) #15 FLT1 (ENSCPRG00005012211) #19 PAN3 (ENSCPRG00005012241) #20 FLT3 (ENSCPRG00005012285) #22 ENSCPRG00005012327 ENSCPRG00005012363 LNX2 (ENSCPRG00005012365) MTIF3 (ENSCPRG00005012370) GTF3A (ENSCPRG00005012372) RASL11A (ENSCPRG00005012398) RPL21 (ENSCPRG00005012404) USP12 (ENSCPRG00005012451) GPR12 (ENSCPRG00005012587) WASF3 (ENSCPRG00005012622) CDK8 (ENSCPRG00005012631) RNF6 (ENSCPRG00005012704) ENSCPRG00005012709 ENSCPRG00005012753 SHISA2 (ENSCPRG00005012789) Cryptodira ANCESTRAL SPECIES ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000178537 ENSGT00940000157332 Testudinoidea ANCESTRAL SPECIES 1 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a.ob.b ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Emydidae ANCESTRAL SPECIES 19 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a.ob.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 66 ENSTMTG00000017339 ENSTMTG00000017322 ENSTMTG00000017306 ENSTMTG00000017295 ENSTMTG00000017281 ENSTMTG00000017266 ENSTMTG00000017086 ENSTMTG00000017063 ENSTMTG00000017059 ENSTMTG00000017052 ENSTMTG00000017027 ##13 ENSTMTG00000017009 #14 ENSTMTG00000016991 #15 ENSTMTG00000016099 #19 ENSTMTG00000015220 #20 ENSTMTG00000015105 #22 ENSTMTG00000015025 #24 ENSTMTG00000015011 ENSTMTG00000014999 #26 ENSTMTG00000014992 ENSTMTG00000014981 ENSTMTG00000014974 ENSTMTG00000014959 ENSTMTG00000014944 ENSTMTG00000014924 ENSTMTG00000014879 ENSTMTG00000014868 ENSTMTG00000014850 ENSTMTG00000014812 ENSTMTG00000014793 ENSTMTG00000014679 Three-toed box turtle MODERN SPECIES 67 ENSTMTG00000006768 ENSTMTG00000006703 TEX26 (ENSTMTG00000006652) ENSTMTG00000006577 ENSTMTG00000006555 ENSTMTG00000006543 ENSTMTG00000006532 ENSTMTG00000006340 ENSTMTG00000006312 ENSTMTG00000006264 ENSTMTG00000006174 ##13 ENSTMTG00000006140 #14 ENSTMTG00000006119 #15 ENSTMTG00000005491 #19 ENSTMTG00000005429 #20 ENSTMTG00000005366 #22 ENSTMTG00000005305 #24 ENSTMTG00000005297 ENSTMTG00000005288 #26 ENSTMTG00000005273 ENSTMTG00000005258 ENSTMTG00000005240 ENSTMTG00000005188 ENSTMTG00000005157 ENSTMTG00000005134 ENSTMTG00000005117 ENSTMTG00000005108 ENSTMTG00000005088 ENSTMTG00000005003 ENSTMTG00000004982 ENSTMTG00000004825 painted turtle MODERN SPECIES HSPH1 (ENSCPBG00000020414) ENSCPBG00000020420 TEX26 (ENSCPBG00000020423) MEDAG (ENSCPBG00000020425) ALOX5AP (ENSCPBG00000020426) USPL1 (ENSCPBG00000020428) ENSCPBG00000020432 KATNAL1 (ENSCPBG00000020433) UBL3 (ENSCPBG00000020434) SLC7A1 (ENSCPBG00000020435) ENSCPBG00000020439 ##13 SLC46A3 (ENSCPBG00000020446) #14 POMP (ENSCPBG00000020448) #15 FLT1 (ENSCPBG00000020453) #19 PAN3 (ENSCPBG00000020461) #20 FLT3 (ENSCPBG00000020464) #22 CDX2 (ENSCPBG00000020467) #24 ENSCPBG00000020468 GSX1 (ENSCPBG00000020469) #26 ENSCPBG00000020470 LNX2 (ENSCPBG00000020474) MTIF3 (ENSCPBG00000020476) GTF3A (ENSCPBG00000020478) RASL11A (ENSCPBG00000020480) ENSCPBG00000020481 USP12 (ENSCPBG00000020485) GPR12 (ENSCPBG00000020487) WASF3 (ENSCPBG00000020488) ENSCPBG00000020495 RNF6 (ENSCPBG00000020502) ATP8A2 (ENSCPBG00000020518) Testudinidae ANCESTRAL SPECIES ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00960000191986 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a.ob.b ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Abingdon island giant tortoise MODERN SPECIES 2506 MTUS2 (ENSCABG00000001449) ##13 SLC46A3 (ENSCABG00000001447) #14 POMP (ENSCABG00000001444) #15 ENSCABG00000001441 FLT1 (ENSCABG00000001419) #19 PAN3 (ENSCABG00000001412) #20 FLT3 (ENSCABG00000001407) #22 CDX2 (ENSCABG00000001373) #24 ENSCABG00000001367 GSX1 (ENSCABG00000001364) #26 ENSCABG00000001360 LNX2 (ENSCABG00000001232) MTIF3 (ENSCABG00000001226) ENSCABG00000001221 ENSCABG00000001216 ENSCABG00000001212 RASL11A (ENSCABG00000001207) RPL21 (ENSCABG00000001202) ENSCABG00000001199 USP12 (ENSCABG00000000741) GPR12 (ENSCABG00000000730) WASF3 (ENSCABG00000000727) Goode s thornscrub tortoise MODERN SPECIES B3GLCT (ENSGEVG00005001778) HSPH1 (ENSGEVG00005001710) ENSGEVG00005001666 TEX26 (ENSGEVG00005001648) ALOX5AP (ENSGEVG00005001628) USPL1 (ENSGEVG00005001581) ENSGEVG00005001495 KATNAL1 (ENSGEVG00005001464) UBL3 (ENSGEVG00005001443) SLC7A1 (ENSGEVG00005001419) ENSGEVG00005001400 ##13 SLC46A3 (ENSGEVG00005001382) #14 POMP (ENSGEVG00005001361) #15 FLT1 (ENSGEVG00005001326) #19 PAN3 (ENSGEVG00005001290) #20 FLT3 (ENSGEVG00005001236) #22 CDX2 (ENSGEVG00005001187) #24 ENSGEVG00005001158 GSX1 (ENSGEVG00005001138) #26 ENSGEVG00005001122 LNX2 (ENSGEVG00005001093) MTIF3 (ENSGEVG00005001075) GTF3A (ENSGEVG00005001061) ENSGEVG00005001047 RASL11A (ENSGEVG00005001037) RPL21 (ENSGEVG00005001010) USP12 (ENSGEVG00005000973) GPR12 (ENSGEVG00005000941) WASF3 (ENSGEVG00005000927) CDK8 (ENSGEVG00005000884) RNF6 (ENSGEVG00005000853) Chinese turtle MODERN SPECIES 2233 SLC46A3 (ENSPSIG00000014278) #14 POMP (ENSPSIG00000014079) #15 FLT1 (ENSPSIG00000012931) #19 PAN3 (ENSPSIG00000012768) #20 FLT3 (ENSPSIG00000012352) #22 CDX2 (ENSPSIG00000012291) #24 ENSPSIG00000012283 ENSPSIG00000011964 LNX2 (ENSPSIG00000011733) MTIF3 (ENSPSIG00000011725) GTF3A (ENSPSIG00000011722) RASL11A (ENSPSIG00000011613) RPL21 (ENSPSIG00000011259) USP12 (ENSPSIG00000010921) ENSPSIG00000010914 GPR12 (ENSPSIG00000001794) WASF3 (ENSPSIG00000010814) CDK8 (ENSPSIG00000010808) RNF6 (ENSPSIG00000010388) ATP8A2 (ENSPSIG00000009377) Lepidosauria ANCESTRAL SPECIES 17 ENSGT00940000155499 ENSGT00940000159635 ENSGT00960000190702 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00940000162542 #25 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 Episquamata ANCESTRAL SPECIES 2 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 ENSGT00940000157443 Toxicofera ANCESTRAL SPECIES 9 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261.a #24 ENSGT00940000161261.b #24 ENSGT00940000163955 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Elapidae ANCESTRAL SPECIES 10 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261.a #24 ENSGT00940000161261.b #24 ENSGT00940000163955 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 Indian cobra MODERN SPECIES 4 ENSNNAG00000018274 MEDAG (ENSNNAG00000018277) ALOX5AP (ENSNNAG00000018279) USPL1 (ENSNNAG00000018281) ENSNNAG00000018286 KATNAL1 (ENSNNAG00000018289) UBL3 (ENSNNAG00000018292) SLC7A1 (ENSNNAG00000018294) ENSNNAG00000018308 ##13 SLC46A3 (ENSNNAG00000018349) #14 POMP (ENSNNAG00000018354) #15 FLT1 (ENSNNAG00000018362) #19 ENSNNAG00000018372 ENSNNAG00000018376 PAN3 (ENSNNAG00000018380) #20 FLT3 (ENSNNAG00000018383) #22 ENSNNAG00000018388 #24 ENSNNAG00000018390 #24 ENSNNAG00000018395 ENSNNAG00000018396 LNX2 (ENSNNAG00000018400) ENSNNAG00000018403 GTF3A (ENSNNAG00000018407) RASL11A (ENSNNAG00000018412) RPL21 (ENSNNAG00000018417) USP12 (ENSNNAG00000018426) GPR12 (ENSNNAG00000018437) WASF3 (ENSNNAG00000018442) CDK8 (ENSNNAG00000018452) RNF6 (ENSNNAG00000018464) ATP8A2 (ENSNNAG00000003171) Elapidae_a ANCESTRAL SPECIES 12 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261.a #24 ENSGT00940000161261.b #24 ENSGT00940000163955 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 ENSGT00940000157443 Blue-lipped sea krait MODERN SPECIES 1732 FLT3 (ENSLLTG00000006714) #22 Acanthophiinae ANCESTRAL SPECIES 14 ENSGT00940000155499 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261.a #24 ENSGT00940000161261.b #24 ENSGT00940000163955 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 ENSGT00940000157443 Eastern brown snake MODERN SPECIES 41 B3GLCT (ENSPTXG00000005615) HSPH1 (ENSPTXG00000005358) ENSPTXG00000005354 MEDAG (ENSPTXG00000005353) ALOX5AP (ENSPTXG00000005352) USPL1 (ENSPTXG00000005351) ENSPTXG00000005350 KATNAL1 (ENSPTXG00000005349) UBL3 (ENSPTXG00000005348) SLC7A1 (ENSPTXG00000005347) MTUS2 (ENSPTXG00000005346) ##13 SLC46A3 (ENSPTXG00000005345) #14 POMP (ENSPTXG00000005344) #15 FLT1 (ENSPTXG00000005343) #19 PAN3 (ENSPTXG00000005342) #20 FLT3 (ENSPTXG00000005341) #22 ENSPTXG00000005340 #24 ENSPTXG00000005339 ENSPTXG00000005338 ENSPTXG00000005337 LNX2 (ENSPTXG00000005336) MTIF3 (ENSPTXG00000005335) GTF3A (ENSPTXG00000005334) RPL21 (ENSPTXG00000005331) USP12 (ENSPTXG00000005330) GPR12 (ENSPTXG00000005329) WASF3 (ENSPTXG00000005326) CDK8 (ENSPTXG00000005324) RNF6 (ENSPTXG00000005321) ATP8A2 (ENSPTXG00000005319) SHISA2 (ENSPTXG00000005318) Mainland tiger snake MODERN SPECIES 68 ENSNSUG00000012843 ENSNSUG00000012844 MEDAG (ENSNSUG00000012845) ALOX5AP (ENSNSUG00000012858) USPL1 (ENSNSUG00000012859) ENSNSUG00000012860 KATNAL1 (ENSNSUG00000012862) UBL3 (ENSNSUG00000012927) SLC7A1 (ENSNSUG00000012928) MTUS2 (ENSNSUG00000012929) ##13 SLC46A3 (ENSNSUG00000012951) #14 POMP (ENSNSUG00000012952) #15 FLT1 (ENSNSUG00000012953) #19 ENSNSUG00000012954 PAN3 (ENSNSUG00000012955) #20 FLT3 (ENSNSUG00000013286) #22 CDX2 (ENSNSUG00000013289) #24 ENSNSUG00000013330 ENSNSUG00000013331 LNX2 (ENSNSUG00000013336) GTF3A (ENSNSUG00000013369) MTIF3 (ENSNSUG00000013371) RPL21 (ENSNSUG00000013372) USP12 (ENSNSUG00000013375) GPR12 (ENSNSUG00000013376) WASF3 (ENSNSUG00000013377) CDK8 (ENSNSUG00000013378) RNF6 (ENSNSUG00000013389) ATP8A2 (ENSNSUG00000013390) SHISA2 (ENSNSUG00000013391) NUP58 (ENSNSUG00000013392) Lizard MODERN SPECIES 2 MEDAG (ENSACAG00000005068) ALOX5AP (ENSACAG00000045423) USPL1 (ENSACAG00000005080) ENSACAG00000005092 KATNAL1 (ENSACAG00000005119) UBL3 (ENSACAG00000005809) SLC7A1 (ENSACAG00000004104) MTUS2 (ENSACAG00000009682) ##13 SLC46A3 (ENSACAG00000009677) #14 ENSACAG00000009671 #15 FLT1 (ENSACAG00000009344) #19 ENSACAG00000043442 ENSACAG00000038181 PAN3 (ENSACAG00000009278) #20 ENSACAG00000044284 FLT3 (ENSACAG00000009188) #22 ENSACAG00000037932 ENSACAG00000022780 ZC3H12C (ENSACAG00000001031) RDX (ENSACAG00000001083) FDX1 (ENSACAG00000001343) ARHGAP20 (ENSACAG00000001368) ENSACAG00000039778 ENSACAG00000044212 ENSACAG00000001418 ENSACAG00000001683 ENSACAG00000001725 ENSACAG00000034997 MPHOSPH8 (ENSACAG00000001907) PSPC1 (ENSACAG00000002093) ZMYM2 (ENSACAG00000002189) Laterata ANCESTRAL SPECIES 3 ENSGT00940000159635 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120.d ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00390000003643 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 ENSGT00940000157443 Common wall lizard MODERN SPECIES 12 MEDAG (ENSPMRG00000002626) ALOX5AP (ENSPMRG00000002620) USPL1 (ENSPMRG00000002600) ENSPMRG00000004304 ENSPMRG00000004293 KATNAL1 (ENSPMRG00000004274) UBL3 (ENSPMRG00000004256) SLC7A1 (ENSPMRG00000004229) MTUS2 (ENSPMRG00000004195) ##13 ENSPMRG00000004177 SLC46A3 (ENSPMRG00000004167) #14 ENSPMRG00000004155 #15 FLT1 (ENSPMRG00000004119) #19 ENSPMRG00000004109 PAN3 (ENSPMRG00000004057) #20 FLT3 (ENSPMRG00000004013) #22 CDX2 (ENSPMRG00000003971) #24 ENSPMRG00000003962 ENSPMRG00000003955 ENSPMRG00000003950 ENSPMRG00000003947 LNX2 (ENSPMRG00000003941) MTIF3 (ENSPMRG00000003936) GTF3A (ENSPMRG00000003933) RASL11A (ENSPMRG00000003932) ENSPMRG00000003922 USP12 (ENSPMRG00000003915) GPR12 (ENSPMRG00000003909) WASF3 (ENSPMRG00000003897) CDK8 (ENSPMRG00000003886) RNF6 (ENSPMRG00000003878) Argentine black and white tegu MODERN SPECIES HSPH1 (ENSSMRG00000013097) ENSSMRG00000013098 ENSSMRG00000013101 MEDAG (ENSSMRG00000013102) ALOX5AP (ENSSMRG00000013103) USPL1 (ENSSMRG00000013104) ENSSMRG00000013105 KATNAL1 (ENSSMRG00000013106) UBL3 (ENSSMRG00000013108) SLC7A1 (ENSSMRG00000013111) MTUS2 (ENSSMRG00000013112) ##13 SLC46A3 (ENSSMRG00000013114) #14 POMP (ENSSMRG00000013115) #15 FLT1 (ENSSMRG00000013116) #19 PAN3 (ENSSMRG00000013117) #20 FLT3 (ENSSMRG00000013118) #22 CDX2 (ENSSMRG00000013119) #24 ENSSMRG00000013120 ENSSMRG00000013121 ENSSMRG00000013122 LNX2 (ENSSMRG00000013124) MTIF3 (ENSSMRG00000013125) GTF3A (ENSSMRG00000013126) RASL11A (ENSSMRG00000013127) USP12 (ENSSMRG00000013130) WASF3 (ENSSMRG00000013132) CDK8 (ENSSMRG00000013133) ATP8A2 (ENSSMRG00000013134) SHISA2 (ENSSMRG00000014778) NUP58 (ENSSMRG00000014779) MTMR6 (ENSSMRG00000014780) tuatara MODERN SPECIES 1117 ENSSPUG00000004469 KATNAL1 (ENSSPUG00000004497) UBL3 (ENSSPUG00000004602) ENSSPUG00000004612 SLC7A1 (ENSSPUG00000004618) ENSSPUG00000004651 ##13 SLC46A3 (ENSSPUG00000004676) #14 ENSSPUG00000004689 POMP (ENSSPUG00000004693) #15 FLT1 (ENSSPUG00000004702) #19 PAN3 (ENSSPUG00000004768) #20 FLT3 (ENSSPUG00000004920) #22 CDX2 (ENSSPUG00000005058) #24 PDX1 (ENSSPUG00000005068) #25 GSX1 (ENSSPUG00000005080) #26 ENSSPUG00000005085 LNX2 (ENSSPUG00000005112) MTIF3 (ENSSPUG00000005295) GTF3A (ENSSPUG00000005307) RASL11A (ENSSPUG00000005315) RPL21 (ENSSPUG00000005343) ENSSPUG00000005393 ENSSPUG00000005404 ENSSPUG00000005419 Anura ANCESTRAL SPECIES 27 ENSGT00940000162967 ENSGT00390000009484 ENSGT00390000018451 ENSGT00940000158706 ENSGT00390000002316 ENSGT00950000183120 ENSGT00940000156630 ENSGT00390000004952.b ENSGT00940000155349 ENSGT00950000183026.B ##13 ENSGT00950000183026.A.b #13 ENSGT00950000183096.a.a.c.b #14 ENSGT00390000010734 #15 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000163955 ENSGT00390000003643 ENSGT00940000158381 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00390000014424 ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000157332 ENSGT00940000157443 ENSGT00730000111111 Frog MODERN SPECIES 2 alox5ap (ENSXETG00000026001) uspl1 (ENSXETG00000039559) hmgb1 (ENSXETG00000019166) katnal1 (ENSXETG00000031073) ENSXETG00000049168 ubl3 (ENSXETG00000026000) ENSXETG00000045339 ENSXETG00000042114 slc7a1 (ENSXETG00000005504) cyb5d1 (ENSXETG00000005518) ##13 ENSXETG00000044437 #13 ENSXETG00000037834 slc46a3 (ENSXETG00000032137) #14 flt1 (ENSXETG00000011791) pan3 (ENSXETG00000011794) #20 flt3 (ENSXETG00000047257) #22 thrb (ENSXETG00000039734) urad (ENSXETG00000037731) cdx2 (ENSXETG00000040504) #24 pdx1 (ENSXETG00000011787) gsx1 (ENSXETG00000035623) polr1d.1 (ENSXETG00000025998) lnx2 (ENSXETG00000031406) gtf3a (ENSXETG00000032930) ENSXETG00000041520 rasl11a (ENSXETG00000030983) rpl21 (ENSXETG00000009802) mtif3 (ENSXETG00000031401) usp12 (ENSXETG00000009799) gpr185a (ENSXETG00000042585) wasf3 (ENSXETG00000032158) Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000021593 KATNAL1 (ENSLLEG00000021451) ENSLLEG00000021425 UBL3 (ENSLLEG00000021251) SLC7A1 (ENSLLEG00000021147) ENSLLEG00000021070 ##13 ENSLLEG00000020950 #13 ENSLLEG00000020904 ENSLLEG00000020871 SLC46A3 (ENSLLEG00000020815) #14 ENSLLEG00000020656 #15 ENSLLEG00000020637 ENSLLEG00000020604 ENSLLEG00000020497 #19 PAN3 (ENSLLEG00000017751) #20 FLT3 (ENSLLEG00000017049) #22 ENSLLEG00000016972 ENSLLEG00000016939 CDX2 (ENSLLEG00000016885) #24 ENSLLEG00000016853 ENSLLEG00000016821 ENSLLEG00000016738 ENSLLEG00000016679 ZC3H12C (ENSLLEG00000016516) LNX2 (ENSLLEG00000016331) ENSLLEG00000016300 GTF3A (ENSLLEG00000016196) RASL11A (ENSLLEG00000016136) ENSLLEG00000016061 MTIF3 (ENSLLEG00000016013) USP12 (ENSLLEG00000015515) Actinopterygii ANCESTRAL SPECIES 89 ENSGT00940000160950 ENSGT00940000153251.a ENSGT00940000170508 ENSGT00940000162182 ENSGT00940000156371 ENSGT00390000017765 ENSGT00940000159385 ENSGT00940000160085 ENSGT00940000165120 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000170353 ENSGT00940000158381 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.b ENSGT00940000164592 ENSGT00940000153284.a ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000178537 ENSGT00940000157332 ENSGT00940000157443 Reedfish MODERN SPECIES 12 ENSECRG00000007247 CIP2A (ENSECRG00000007313) ENSECRG00000007340 PLCXD2 (ENSECRG00000007358) ENSECRG00000007373 PHLDB2 (ENSECRG00000007400) tagln3b (ENSECRG00000007431) ENSECRG00000007451 TAGLN3 (ENSECRG00000007472) TMPRSS7 (ENSECRG00000007492) ENSECRG00000007521 ENSECRG00000007531 ENSECRG00000007553 flt1 (ENSECRG00000007592) #19 pan3 (ENSECRG00000007684) #20 FLT3 (ENSECRG00000007743) #22 urad (ENSECRG00000007776) CDX2 (ENSECRG00000007793) #24 pdx1 (ENSECRG00000007815) ENSECRG00000007834 si:ch211-140b10.6 (ENSECRG00000007844) lnx2a (ENSECRG00000007858) MTIF3 (ENSECRG00000007889) gtf3ab (ENSECRG00000007924) RASL11A (ENSECRG00000007941) rpl21 (ENSECRG00000007956) usp12a (ENSECRG00000008004) GPR12 (ENSECRG00000008087) wasf3b (ENSECRG00000008096) cdk8 (ENSECRG00000008109) ENSECRG00000008118 Neopterygii ANCESTRAL SPECIES 55 ENSGT00940000154103.a ENSGT00940000154936 ENSGT00390000017765 ENSGT00940000159385 ENSGT00940000160085 ENSGT00940000165120 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000170353 ENSGT00940000158381 ENSGT00390000002395 ENSGT00940000161261 #24 ENSGT00940000154361.A #26 ENSGT00390000003643 ENSGT00390000014424 ENSGT00940000155647 ENSGT00950000182922.b ENSGT00940000153284.a.mc.b ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000178537 Spotted gar MODERN SPECIES 669 C2CD2 (ENSLOCG00000004620) PRDM15 (ENSLOCG00000004600) zgc:112083 (ENSLOCG00000004586) ripk4 (ENSLOCG00000004558) zgc:110006 (ENSLOCG00000004543) btg3 (ENSLOCG00000004531) cxadr (ENSLOCG00000004512) c1qtnf9 (ENSLOCG00000004497) SPATA13 (ENSLOCG00000004477) tagln3b (ENSLOCG00000004461) tagln3a (ENSLOCG00000004445) TMPRSS7 (ENSLOCG00000004426) ENSLOCG00000004407 flt1 (ENSLOCG00000004379) #19 pan3 (ENSLOCG00000004336) #20 FLT3 (ENSLOCG00000004310) #22 urad (ENSLOCG00000004296) CDX2 (ENSLOCG00000004278) #24 pdx1 (ENSLOCG00000004260) gsx1 (ENSLOCG00000004253) #26 si:ch211-140b10.6 (ENSLOCG00000004237) lnx2a (ENSLOCG00000004220) gtf3ab (ENSLOCG00000004190) MTIF3 (ENSLOCG00000004205) RASL11A (ENSLOCG00000004176) rpl21 (ENSLOCG00000004171) usp12a (ENSLOCG00000004146) GPR12 (ENSLOCG00000018189) wasf3b (ENSLOCG00000004135) cdk8 (ENSLOCG00000004124) ATP8A2 (ENSLOCG00000004080) Osteoglossocephalai ANCESTRAL SPECIES 99 ENSGT00940000159385 ENSGT00390000017765 ENSGT00940000176911 ENSGT00940000154936 ENSGT00940000154103.a ENSGT00940000160085 ENSGT00940000165120 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000170353 ENSGT00940000158381 ENSGT00390000002395 ENSGT00940000163955 ENSGT00390000003643 ENSGT00390000014424 ENSGT00940000155647.bb ENSGT00940000155647.cb ENSGT00950000182922.b ENSGT00940000153284.a.mc.b ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a.d ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000178537 Osteoglossiformes ANCESTRAL SPECIES 67 ENSGT00390000017765 ENSGT00940000154103.a ENSGT00940000160085 ENSGT00940000165120 ENSGT00940000158713 #19 ENSGT00390000001504.c #20 ENSGT00940000160575 #22 ENSGT00390000002395 ENSGT00940000163955 ENSGT00390000003643 ENSGT00940000158381 ENSGT00940000155647.bb ENSGT00950000182922.b ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a.c ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000157332 ENSGT00940000157443 ENSGT00390000006207 ENSGT00940000161555 ENSGT00940000158810 P. kingsleyae MODERN SPECIES 1048 pan3 (ENSPKIG00000008329) #20 ENSPKIG00000008367 #22 pdx1 (ENSPKIG00000008406) urad (ENSPKIG00000008419) ENSPKIG00000008431 Clupeocephala ANCESTRAL SPECIES 175 ENSGT00940000176911 ENSGT00940000154936 ENSGT00940000154103.a ENSGT00940000160085 ENSGT00940000165120 ENSGT00940000158713 #19 ENSGT00390000001504 #20 ENSGT00940000160575 #22 ENSGT00940000170353 ENSGT00940000158381 ENSGT00940000155647.cb ENSGT00950000182922.b ENSGT00940000153284.a.mc.b ENSGT01060000248564.b.a.b.a ENSGT00950000182962.a.a.d ENSGT00940000157104 ENSGT00940000158530 ENSGT00940000178537 ENSGT00940000157332 ENSGT00940000157443 ENSGT00390000006207 ENSGT00940000161555 ENSGT00940000158810 Otomorpha ANCESTRAL SPECIES ENSGT00940000160575 #22 Otophysi ANCESTRAL SPECIES ENSGT00940000160575 #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000160575 #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000160575 #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000160575 #22 Golden-line barbel MODERN SPECIES 808 septin8a (ENSSGRG00000039948) CCNI2 (ENSSGRG00000039940) ENSSGRG00000039939 stk26 (ENSSGRG00000039938) tmem185 (ENSSGRG00000039922) ANKRD46 (ENSSGRG00000039921) atg4a (ENSSGRG00000039903) ENSSGRG00000039901 ENSSGRG00000039900 ENSSGRG00000039899 ENSSGRG00000039894 ENSSGRG00000039893 ENSSGRG00000039892 dkc1 (ENSSGRG00000039150) pdlim4 (ENSSGRG00000039146) ENSSGRG00000039137 #22 ENSSGRG00000039135 ENSSGRG00000039134 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000160575 #22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000160575 #22 Salmoninae ANCESTRAL SPECIES 149 ENSGT00940000159294.e ENSGT00940000159294.f.b.a ENSGT00940000157658.cb.b ENSGT00950000183215.c.a.b.gb ENSGT00390000014100.k.b.b ENSGT00940000162962.c.b ENSGT01060000251044 ENSGT00940000158777.o ENSGT00390000017765.b.c ENSGT00940000159385.f.b ENSGT00940000176911 ENSGT00940000154936.c.a ENSGT00940000154103.a.g ENSGT00940000158713.c #19 ENSGT00390000001504.f #20 ENSGT00940000160575 #22 ENSGT00940000163955.v.a ENSGT00940000158381.e ENSGT00940000155647.cb ENSGT00950000182922.b.g.b ENSGT00940000153284.a.mc.b.a ENSGT01060000248564.b.a.b.a.b ENSGT00950000182962.a.a.d.b ENSGT00940000157104.e ENSGT00940000158530.x.b ENSGT00940000157332.o ENSGT00940000157443.d.b.a ENSGT00940000158810.d ENSGT00390000015759.b ENSGT00390000009110.b ENSGT00550000074787.d.a.a.c Salmoninae_a ANCESTRAL SPECIES 35 ENSGT00940000154004.a.e.b.c ENSGT00940000159294.f.b.b ENSGT00940000157658.cb.a ENSGT00950000183215.c.a.b.fb ENSGT00390000014100.k.b.a ENSGT00940000162962.c.a ENSGT01060000251044 ENSGT00940000158777.o ENSGT00390000017765.b.c ENSGT00940000159385.f.b ENSGT00940000176911 ENSGT00940000154936.c.a ENSGT00940000154103.a.g ENSGT00940000158713.c #19 ENSGT00390000001504.f #20 ENSGT00940000160575 #22 ENSGT00940000163955.v.a ENSGT00940000158381.e ENSGT00940000155647.cb ENSGT00950000182922.b.g.b ENSGT00940000153284.a.mc.b.a ENSGT01060000248564.b.a.b.a.b ENSGT00950000182962.a.a.d.b ENSGT00940000157104.e ENSGT00940000158530.x.b ENSGT00940000157332.o ENSGT00940000157443.d.b.a ENSGT00940000158810.d ENSGT00390000015759.b ENSGT00390000009110.b ENSGT00550000074787.d.a.a.c Oncorhynchus ANCESTRAL SPECIES 27 ENSGT00940000154004.a.e.b.c ENSGT00940000159294.f.b.b ENSGT00940000157658.cb.a ENSGT00950000183215.c.a.b.fb ENSGT00390000014100.k.b.a ENSGT00940000162962.c.a ENSGT01010000227996 ENSGT00940000158777.o ENSGT00390000017765.b.c ENSGT00940000159385.f.b ENSGT00940000154936.c.a ENSGT00940000176911 ENSGT00940000154103.a.g ENSGT00940000158713.c #19 ENSGT00390000001504.f #20 ENSGT00940000160575 #22 ENSGT00940000163955.v.a ENSGT00940000158381.e ENSGT00940000155647.cb ENSGT00950000182922.b.g.b ENSGT00940000153284.a.mc.b.a ENSGT01060000248564.b.a.b.a.b ENSGT00950000182962.a.a.d.b ENSGT00940000157104.e ENSGT00940000158530.x.b ENSGT00940000157332.o ENSGT00940000157443.d.b.a ENSGT00940000158810.d ENSGT00390000015759.b ENSGT00390000009110.b ENSGT00550000074787.d.a.a.c Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00940000154004.a.e.b.c ENSGT00940000159294.f.b.b ENSGT00940000157658.cb.a ENSGT00950000183215.c.a.b.fb ENSGT00390000014100.k.b.a ENSGT00940000162962.c.a ENSGT01010000227996 ENSGT00940000158777.o ENSGT00390000017765.b.c ENSGT00940000159385.f.b ENSGT00940000154936.c.a ENSGT00940000176911 ENSGT00940000154103.a.g ENSGT00940000158713.c #19 ENSGT00390000001504.f #20 ENSGT00940000160575 #22 ENSGT00940000163955.v.a ENSGT00940000158381.e ENSGT00940000155647.cb ENSGT00950000182922.b.g.b ENSGT00940000153284.a.mc.b.a ENSGT01060000248564.b.a.b.a.b ENSGT00950000182962.a.a.d.b ENSGT00940000157104.e ENSGT00940000158530.x.b ENSGT00940000157332.o ENSGT01010000229159 ENSGT00940000157443.d.b.a ENSGT00940000158810.d ENSGT00390000015759.b ENSGT00390000009110.b Chinook salmon MODERN SPECIES 21 ENSOTSG00005011641 ENSOTSG00005011642 ENSOTSG00005011645 ENSOTSG00005011647 ENSOTSG00005011649 ythdf3 (ENSOTSG00005011650) ENSOTSG00005011651 tagln3b (ENSOTSG00005011653) tagln3a (ENSOTSG00005011654) c1qtnf9 (ENSOTSG00005011655) ENSOTSG00005011656 SPATA13 (ENSOTSG00005011658) flt1 (ENSOTSG00005011660) #19 ENSOTSG00005011663 pan3 (ENSOTSG00005011665) #20 FLT3 (ENSOTSG00005011674) #22 ENSOTSG00005011675 pdx1 (ENSOTSG00005011676) lnx2a (ENSOTSG00005011677) gtf3ab (ENSOTSG00005011678) RPL21 (ENSOTSG00005011679) usp12a (ENSOTSG00005011681) GPR12 (ENSOTSG00005011986) cdk8 (ENSOTSG00005011987) rnf6 (ENSOTSG00005012344) ENSOTSG00005012348 ENSOTSG00005012357 SHISA2 (ENSOTSG00005012358) bhlhe22 (ENSOTSG00005002618) ENSOTSG00005002903 armc1 (ENSOTSG00005002958) Coho salmon MODERN SPECIES 2 DNAJC5B (ENSOKIG00005007289) pde7a (ENSOKIG00005007319) mtfr1 (ENSOKIG00005007440) armc1 (ENSOKIG00005007459) bhlhe22 (ENSOKIG00005007480) ENSOKIG00005007487 ENSOKIG00005007499 ythdf3 (ENSOKIG00005007522) tagln3b (ENSOKIG00005007532) ENSOKIG00005007540 c1qtnf9 (ENSOKIG00005007570) SPATA13 (ENSOKIG00005007613) ENSOKIG00005007717 FLT1 (ENSOKIG00005007728) #19 PAN3 (ENSOKIG00005007837) #20 FLT3 (ENSOKIG00005008384) #22 pdx1 (ENSOKIG00005008402) lnx2a (ENSOKIG00005008419) gtf3ab (ENSOKIG00005008478) rpl21 (ENSOKIG00005008531) usp12a (ENSOKIG00005008577) GPR12 (ENSOKIG00005008710) wasf3b (ENSOKIG00005008718) cdk8 (ENSOKIG00005008750) rnf6 (ENSOKIG00005008927) ATP8A2 (ENSOKIG00005009001) ENSOKIG00005009778 SHISA2 (ENSOKIG00005009806) boc (ENSOKIG00005009821) USF3 (ENSOKIG00005009877) naa50 (ENSOKIG00005009890) Salmo ANCESTRAL SPECIES 34 ENSGT00940000154473.a.e.a ENSGT00940000154004.a.e.b.c ENSGT00940000157658.cb.a ENSGT00950000183215.c.a.b.fb ENSGT00390000014100.k.b.a ENSGT00940000162962.c.a ENSGT01060000251044 ENSGT00940000158777.o ENSGT00390000017765.b.c ENSGT00940000159385.f.b ENSGT00940000176911 ENSGT00940000154936.c.a ENSGT00940000154103.a.g ENSGT00940000158713.c #19 ENSGT00390000001504.f #20 ENSGT00940000160575 #22 ENSGT00940000163955.v.a ENSGT00940000158381.e ENSGT00940000155647.cb ENSGT00950000182922.b.g.b ENSGT00940000153284.a.mc.b.a ENSGT01060000248564.b.a.b.a.b ENSGT00950000182962.a.a.d.b ENSGT00940000157104.e ENSGT00940000158530.x.b ENSGT00940000157332.o ENSGT00940000157443.d.b.a ENSGT00940000158810.d ENSGT00390000015759.b ENSGT00390000009110.b ENSGT00550000074787.d.a.a.c Atlantic salmon MODERN SPECIES 21 ENSSSAG00000080736 crhb (ENSSSAG00000118338) trim55b (ENSSSAG00000080754) pde7a (ENSSSAG00000080765) mtfr1 (ENSSSAG00000080783) armc1 (ENSSSAG00000102374) bhlhe22 (ENSSSAG00000084019) ENSSSAG00000056506 ythdf3 (ENSSSAG00000056509) tagln3b (ENSSSAG00000115887) ENSSSAG00000115980 c1qtnf9 (ENSSSAG00000056526) ENSSSAG00000056540 FLT1 (ENSSSAG00000065213) #19 PAN3 (ENSSSAG00000060444) #20 FLT3 (ENSSSAG00000060395) #22 LNX2 (ENSSSAG00000060315) pdx1 (ENSSSAG00000095952) gtf3ab (ENSSSAG00000060244) usp12 (ENSSSAG00000060005) rl21 (ENSSSAG00000060203) GPR12 (ENSSSAG00000102702) wasf3b (ENSSSAG00000059960) cdk8 (ENSSSAG00000059349) ENSSSAG00000056659 ENSSSAG00000091684 ENSSSAG00000097118 boc (ENSSSAG00000076978) USF3 (ENSSSAG00000099363) naa50 (ENSSSAG00000077013) VATA (ENSSSAG00000077020)