Tetrapoda	ANCESTRAL SPECIES	187												ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36
Amniota	ANCESTRAL SPECIES	53			ENSGT00390000009978	ENSGT00940000159340	ENSGT00940000157871	ENSGT00940000156876	ENSGT00730000111328	ENSGT00390000002109	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162867	ENSGT00940000160666 #26	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37	ENSGT00950000183070.a.a	ENSGT00940000159480	ENSGT00390000005242	ENSGT00940000153615.a.b
Mammalia	ANCESTRAL SPECIES	88	ENSGT00940000161987	ENSGT00940000163123	ENSGT00940000154685	ENSGT00940000155319	ENSGT00940000158779	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162867	ENSGT00940000160666 #26	ENSGT00940000158835	ENSGT00940000162400 #25
Theria	ANCESTRAL SPECIES		ENSGT00940000163123	ENSGT00940000154685	ENSGT00940000155319	ENSGT00940000158779	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162400 #25
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000163775	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000162867	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000164557	ENSGT00940000156296	ENSGT00960000187102	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Caniformia	ANCESTRAL SPECIES	19	ENSGT00940000163775	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Canidae	ANCESTRAL SPECIES	8	ENSGT00940000158779	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076.`b.a #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37
Canis_lupus	ANCESTRAL SPECIES	14	ENSGT00940000158779	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076.`b.a #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37
Dingo	MODERN SPECIES	56											AICDA (ENSCAFG00020003515) #17	APOBEC1 (ENSCAFG00020003511) #18	GDF3 (ENSCAFG00020003508) #19	ENSCAFG00020003496 #20	ENSCAFG00020003478 #21	FOXJ2 (ENSCAFG00020003470) #22	C3AR1 (ENSCAFG00020003468) #23	NECAP1 (ENSCAFG00020003465) #24	CLEC4D (ENSCAFG00020003458) #25	CLEC4E (ENSCAFG00020003453) #26	CD163 (ENSCAFG00020003427) #27	ENSCAFG00020003421 #28	ENSCAFG00020003201 #29	PEX5 (ENSCAFG00020003159) #30	CLSTN3 (ENSCAFG00020003152) #31	RBP5 (ENSCAFG00020003147) #32	C1RL (ENSCAFG00020003144) #33	C1R (ENSCAFG00020003140) #34	C1S (ENSCAFG00020003135) #35	LPCAT3 (ENSCAFG00020003130) #36	EMG1 (ENSCAFG00020003127) #37
Dog	MODERN SPECIES	19	ENSCAFG00845028400	A2M (ENSCAFG00845028486)	KLRG1 (ENSCAFG00845028658)	M6PR (ENSCAFG00845028694)	PHC1 (ENSCAFG00845028815)	A2ML1 (ENSCAFG00845029001)	ENSCAFG00845029263	MFAP5 (ENSCAFG00845029417)	AICDA (ENSCAFG00845029609) #17	APOBEC1 (ENSCAFG00845029656) #18	ENSCAFG00845029698	GDF3 (ENSCAFG00845029730) #19	ENSCAFG00845029751	ENSCAFG00845029777 #20	ENSCAFG00845029831 #21	FOXJ2 (ENSCAFG00845029918) #22	C3AR1 (ENSCAFG00845029934) #23	NECAP1 (ENSCAFG00845022681) #24	CLEC4D (ENSCAFG00845022895) #25	ENSCAFG00845023026 #26	ENSCAFG00845023130	CD163 (ENSCAFG00845023298) #27	ENSCAFG00845023895 ##28	ENSCAFG00845023930	ENSCAFG00845023990 #29	PEX5 (ENSCAFG00845024224) #30	CLSTN3 (ENSCAFG00845024611) #31	ENSCAFG00845024907 #32	C1RL (ENSCAFG00845024953) #33	C1R (ENSCAFG00845025120) #34	C1S (ENSCAFG00845025415) #35
Red fox	MODERN SPECIES	18	ENSVVUG00000005235	ENSVVUG00000005255	ENSVVUG00000005349	A2M (ENSVVUG00000007294)	KLRG1 (ENSVVUG00000010440)	M6PR (ENSVVUG00000010445)	PHC1 (ENSVVUG00000010457)	A2ML1 (ENSVVUG00000010479)	RIMKLB (ENSVVUG00000010490)	MFAP5 (ENSVVUG00000010503)	ENSVVUG00000010518 #17	APOBEC1 (ENSVVUG00000010522) #18	GDF3 (ENSVVUG00000010531) #19	ENSVVUG00000010542 #20	ENSVVUG00000010572 #21	FOXJ2 (ENSVVUG00000010588) #22	C3AR1 (ENSVVUG00000010596) #23	NECAP1 (ENSVVUG00000010598) #24	CLEC4D (ENSVVUG00000010603) #25	CLEC4E (ENSVVUG00000010608) #26	CD163 (ENSVVUG00000010646) #27	ENSVVUG00000010668	ENSVVUG00000010676 #29	PEX5 (ENSVVUG00000010700) #30	CLSTN3 (ENSVVUG00000010740) #31	RBP5 (ENSVVUG00000010750) #32	C1RL (ENSVVUG00000010755) #33	C1R (ENSVVUG00000010758) #34	C1S (ENSVVUG00000010771) #35	LPCAT3 (ENSVVUG00000010795) #36	EMG1 (ENSVVUG00000010807) #37
Caniformia_b	ANCESTRAL SPECIES	17	ENSGT00940000163775.d.a	ENSGT00940000163775.c	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Ursidae	ANCESTRAL SPECIES	25	ENSGT00940000158779	ENSGT00940000163775.d.a	ENSGT00940000154904.b.j.b	ENSGT00940000163609.b.b	ENSGT00940000154904.b.j.a	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a.b	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37
Ursus	ANCESTRAL SPECIES	103														ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
American black bear	DUPLICATION
American black bear	MODERN SPECIES	5028																ENSUAMG00000022443 #22	C3AR1 (ENSUAMG00000022606) #23	NECAP1 (ENSUAMG00000022608) #24	CLEC4A (ENSUAMG00000022610)
American black bear	MODERN SPECIES	8827																ENSUAMG00000000262 #22
Polar bear	MODERN SPECIES	484														ENSUMAG00000003054 #20	ENSUMAG00000003057 #21	FOXJ2 (ENSUMAG00000003061) #22	C3AR1 (ENSUMAG00000003076) #23	NECAP1 (ENSUMAG00000003080) #24	CLEC4A (ENSUMAG00000003085)	ENSUMAG00000003089	CLEC4D (ENSUMAG00000003097) #25	CLEC4E (ENSUMAG00000003105) #26	CD163 (ENSUMAG00000003115) #27	ENSUMAG00000003138	ENSUMAG00000003145 #29	PEX5 (ENSUMAG00000003162) #30	CLSTN3 (ENSUMAG00000003194) #31	RBP5 (ENSUMAG00000003222) #32	C1RL (ENSUMAG00000003224) #33	C1R (ENSUMAG00000003227) #34	C1S (ENSUMAG00000003232) #35
Giant Panda	MODERN SPECIES	7	ENSAMEG00000004015	ENSAMEG00000025977	ENSAMEG00000004046	ENSAMEG00000025709	ENSAMEG00000013869	ENSAMEG00000014065	M6PR (ENSAMEG00000006774)	PHC1 (ENSAMEG00000006797)	RIMKLB (ENSAMEG00000007043)	ENSAMEG00000023836	ENSAMEG00000007082 #17	ENSAMEG00000007098 #18	GDF3 (ENSAMEG00000007118) #19	ENSAMEG00000017064 #20	ENSAMEG00000017033 #21	FOXJ2 (ENSAMEG00000017023) #22	C3AR1 (ENSAMEG00000018977) #23	NECAP1 (ENSAMEG00000016989) #24	CLEC4A (ENSAMEG00000016975)	CLEC4D (ENSAMEG00000013378) #25	ENSAMEG00000013399 #26	ENSAMEG00000013414 #27	ENSAMEG00000029290	ENSAMEG00000013450 #29	PEX5 (ENSAMEG00000013470) #30	CLSTN3 (ENSAMEG00000013498) #31	C1R (ENSAMEG00000013566) #34	C1S (ENSAMEG00000013668) #35	LPCAT3 (ENSAMEG00000013733) #36	EMG1 (ENSAMEG00000013753) #37	PHB2 (ENSAMEG00000013760)
Mustelinae	ANCESTRAL SPECIES	95														ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37
Ferret	MODERN SPECIES	284	ENSMPUG00000020126	TAFA2 (ENSMPUG00000016710)	USP15 (ENSMPUG00000016712)	MON2 (ENSMPUG00000016714)	PPM1H (ENSMPUG00000016718)	ENSMPUG00000016720	ENSMPUG00000020127	C12orf56 (ENSMPUG00000016721)	KICS2 (ENSMPUG00000016723)	SRGAP1 (ENSMPUG00000016725)	RXYLT1 (ENSMPUG00000016726)	AVPR1A (ENSMPUG00000016730)	ENSMPUG00000016731 #20	ENSMPUG00000016737 #21	ENSMPUG00000016739	FOXJ2 (ENSMPUG00000016740) #22	C3AR1 (ENSMPUG00000020128) #23	NECAP1 (ENSMPUG00000016742) #24	CLEC4D (ENSMPUG00000016744) #25	CLEC4E (ENSMPUG00000016746) #26	ENSMPUG00000016748	ENSMPUG00000016749	CD163 (ENSMPUG00000016750) #27	ENSMPUG00000016751	ENSMPUG00000016752	ENSMPUG00000016753	ENSMPUG00000016754 #29	PEX5 (ENSMPUG00000016756) #30	CLSTN3 (ENSMPUG00000016757) #31	RBP5 (ENSMPUG00000016758) #32	C1RL (ENSMPUG00000016759) #33
American mink	MODERN SPECIES	740																FOXJ2 (ENSNVIG00000001977) #22	C3AR1 (ENSNVIG00000002009) #23
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT01000000221582	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00400000025247	ENSGT00670000098076.z.a.a #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Panthera	ANCESTRAL SPECIES		ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT01000000221582	ENSGT00940000162534 #19	ENSGT01090000260593	ENSGT00670000098076.z.a.b #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT01000000221582	ENSGT00940000162534 #19	ENSGT01090000260593	ENSGT00670000098076.z.a.a #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
lion	MODERN SPECIES	7	A2M (ENSPLOG00000004778)	KLRG1 (ENSPLOG00000004743)	M6PR (ENSPLOG00000004725)	PHC1 (ENSPLOG00000004684)	A2ML1 (ENSPLOG00000004633)	RIMKLB (ENSPLOG00000004591)	MFAP5 (ENSPLOG00000004520)	AICDA (ENSPLOG00000004472) #17	APOBEC1 (ENSPLOG00000004460) #18	ENSPLOG00000004453	GDF3 (ENSPLOG00000004445) #19	ENSPLOG00000004437	ENSPLOG00000004427	ENSPLOG00000004423 #20	ENSPLOG00000004391 #21	FOXJ2 (ENSPLOG00000004362) #22	C3AR1 (ENSPLOG00000004354) #23	NECAP1 (ENSPLOG00000004312) #24	CLEC4A (ENSPLOG00000004266)	CLEC6A (ENSPLOG00000004242)	CLEC4D (ENSPLOG00000004222) #25	CLEC4E (ENSPLOG00000004205) #26	CD163 (ENSPLOG00000004151) #27	ENSPLOG00000004116	ENSPLOG00000003948 #29	PEX5 (ENSPLOG00000003652) #30	CLSTN3 (ENSPLOG00000003585) #31	RBP5 (ENSPLOG00000003551) #32	C1RL (ENSPLOG00000003525) #33	C1R (ENSPLOG00000003484) #34	C1S (ENSPLOG00000003432) #35
leopard	MODERN SPECIES	45	PZP (ENSPPRG00000006237)	A2M (ENSPPRG00000003942)	KLRG1 (ENSPPRG00000001301)	M6PR (ENSPPRG00000000599)	PHC1 (ENSPPRG00000000264)	A2ML1 (ENSPPRG00000024201)	RIMKLB (ENSPPRG00000021964)	MFAP5 (ENSPPRG00000016849)	AICDA (ENSPPRG00000012985) #17	APOBEC1 (ENSPPRG00000012182) #18	GDF3 (ENSPPRG00000012035) #19	ENSPPRG00000011544	ENSPPRG00000011257	ENSPPRG00000011082 #20	ENSPPRG00000010695 #21	FOXJ2 (ENSPPRG00000007578) #22	C3AR1 (ENSPPRG00000021080) #23	NECAP1 (ENSPPRG00000005554) #24	CLEC4A (ENSPPRG00000003126)	CLEC6A (ENSPPRG00000002256)	CLEC4D (ENSPPRG00000001276) #25	CLEC4E (ENSPPRG00000000406) #26	CD163 (ENSPPRG00000023017) #27	ENSPPRG00000013375	ENSPPRG00000012515 #29	PEX5 (ENSPPRG00000001418) #30	CLSTN3 (ENSPPRG00000022969) #31	RBP5 (ENSPPRG00000022406) #32	C1RL (ENSPPRG00000020793) #33	C1R (ENSPPRG00000015378) #34	C1S (ENSPPRG00000013655) #35
Tiger	MODERN SPECIES	306		KLRG1 (ENSPTIG00000006757)	M6PR (ENSPTIG00000008331)	PHC1 (ENSPTIG00000009048)	A2ML1 (ENSPTIG00000011420)	RIMKLB (ENSPTIG00000014979)	MFAP5 (ENSPTIG00000017569)	AICDA (ENSPTIG00000020074) #17	APOBEC1 (ENSPTIG00000020280) #18	GDF3 (ENSPTIG00000020314) #19	ENSPTIG00000020375	ENSPTIG00000020519	ENSPTIG00000020669	ENSPTIG00000020874 #20	ENSPTIG00000021229 #21	FOXJ2 (ENSPTIG00000021498) #22	C3AR1 (ENSPTIG00000005237) #23	NECAP1 (ENSPTIG00000003563) #24	CLEC4A (ENSPTIG00000007296)	CLEC6A (ENSPTIG00000008989)	CLEC4D (ENSPTIG00000009303) #25	CLEC4E (ENSPTIG00000009417) #26	CD163 (ENSPTIG00000010909) #27	ENSPTIG00000013283	PEX5 (ENSPTIG00000013475) #30	CLSTN3 (ENSPTIG00000018008) #31	RBP5 (ENSPTIG00000018369) #32	C1RL (ENSPTIG00000018833) #33	C1R (ENSPTIG00000019514) #34	C1S (ENSPTIG00000021139) #35	LPCAT3 (ENSPTIG00000021406) #36
Cat	MODERN SPECIES	238	ENSFCAG00000030909	A2M (ENSFCAG00000015282)	KLRG1 (ENSFCAG00000044898)	PHC1 (ENSFCAG00000015277)	M6PR (ENSFCAG00000015280)	A2ML1 (ENSFCAG00000042227)	RIMKLB (ENSFCAG00000038333)	MFAP5 (ENSFCAG00000043444)	AICDA (ENSFCAG00000006052) #17	APOBEC1 (ENSFCAG00000009350) #18	ENSFCAG00000053817	GDF3 (ENSFCAG00000009940) #19	ENSFCAG00000049228	NANOG (ENSFCAG00000001621) #20	ENSFCAG00000001625 #21	FOXJ2 (ENSFCAG00000002323) #22	C3AR1 (ENSFCAG00000027943) #23	NECAP1 (ENSFCAG00000002325) #24	CLEC4A (ENSFCAG00000035416)	CLEC6A (ENSFCAG00000042424)	CLEC4D (ENSFCAG00000007076) #25	CLEC4E (ENSFCAG00000038519) #26	CD163 (ENSFCAG00000002952) #27	ENSFCAG00000038766	ENSFCAG00000035965	PEX5 (ENSFCAG00000000184) #30	CLSTN3 (ENSFCAG00000000183) #31	RBP5 (ENSFCAG00000040547) #32	ENSFCAG00000052347 #33	ENSFCAG00000000179 #33	ENSFCAG00000048167 #34
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Equus	ANCESTRAL SPECIES	28	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00390000012976.c.a.b	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00730000111779.d	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33
Donkey	MODERN SPECIES	14	ENSEASG00005015884	KLRG1 (ENSEASG00005033856)	M6PR (ENSEASG00005025448)	PHC1 (ENSEASG00005015938)	A2ML1 (ENSEASG00005029047)	RIMKLB (ENSEASG00005015941)	ENSEASG00005015943	ENSEASG00005015945	ENSEASG00005015947 #17	ENSEASG00005015951 #18	GDF3 (ENSEASG00005015956) #19	ENSEASG00005038232	ENSEASG00005015959	ENSEASG00005015961 #20	ENSEASG00005015964 #21	FOXJ2 (ENSEASG00005015977) #22	C3AR1 (ENSEASG00005026436) #23	NECAP1 (ENSEASG00005015980) #24	ENSEASG00005024712	CLEC6A (ENSEASG00005025981)	CLEC4D (ENSEASG00005015987) #25	ENSEASG00005029235 #26	ENSEASG00005015993	ENSEASG00005015995	ENSEASG00005015996 #27	CD163L1 (ENSEASG00005015998)	ENSEASG00005026036	ENSEASG00005016000 #29	PEX5 (ENSEASG00005016004) #30	CLSTN3 (ENSEASG00005016008) #31	RBP5 (ENSEASG00005036449) #32
Horse	MODERN SPECIES	27	KLRG1 (ENSECAG00000024523)	M6PR (ENSECAG00000021995)	PHC1 (ENSECAG00000015666)	A2ML1 (ENSECAG00000024232)	RIMKLB (ENSECAG00000026969)	ENSECAG00000033567	ENSECAG00000040400	AICDA (ENSECAG00000018578) #17	APOBEC1 (ENSECAG00000017163) #18	GDF3 (ENSECAG00000017031) #19	DPPA3 (ENSECAG00000028670)	ENSECAG00000003269	ENSECAG00000031106	ENSECAG00000012614 #20	ENSECAG00000024719 #21	FOXJ2 (ENSECAG00000020237) #22	C3AR1 (ENSECAG00000003106) #23	NECAP1 (ENSECAG00000012978) #24	ENSECAG00000055481	CLEC6A (ENSECAG00000010716)	CLEC4D (ENSECAG00000009973) #25	CLEC4E (ENSECAG00000008274) #26	ENSECAG00000033229	ENSECAG00000029799	CD163 (ENSECAG00000019111) #27	CD163L1 (ENSECAG00000012955)	ENSECAG00000038042	ENSECAG00000004670 #29	ENSECAG00000046287	PEX5 (ENSECAG00000017111) #30	RBP5 (ENSECAG00000014695) #32
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000163775	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00940000158779	ENSGT00940000163775	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36
Greater horseshoe bat	MODERN SPECIES	1	ENSRFEG00010004925	ENSRFEG00010004915	ENSRFEG00010004896	A2M (ENSRFEG00010004808)	KLRG1 (ENSRFEG00010004771)	M6PR (ENSRFEG00010004761)	PHC1 (ENSRFEG00010004721)	A2ML1 (ENSRFEG00010004669)	RIMKLB (ENSRFEG00010004643)	MFAP5 (ENSRFEG00010004574)	AICDA (ENSRFEG00010004503) #17	APOBEC1 (ENSRFEG00010004477) #18	GDF3 (ENSRFEG00010004463) #19	ENSRFEG00010004441 #20	ENSRFEG00010004409 #21	FOXJ2 (ENSRFEG00010004385) #22	C3AR1 (ENSRFEG00010004370) #23	NECAP1 (ENSRFEG00010004350) #24	CLEC4A (ENSRFEG00010004312)	CLEC4D (ENSRFEG00010004256) #25	CLEC4E (ENSRFEG00010004278) #26	CD163 (ENSRFEG00010004222) #27	ENSRFEG00010004205	ENSRFEG00010004197	ENSRFEG00010004181 #29	PEX5 (ENSRFEG00010004095) #30	CLSTN3 (ENSRFEG00010004041) #31	RBP5 (ENSRFEG00010004005) #32	C1RL (ENSRFEG00010003986) #33	C1R (ENSRFEG00010003937) #34	C1S (ENSRFEG00010003888) #35
Microbat	MODERN SPECIES	947	ENSMLUG00000011177	ENSMLUG00000023672	ENSMLUG00000023713	M6PR (ENSMLUG00000011164)	PHC1 (ENSMLUG00000011125)	A2ML1 (ENSMLUG00000016557)	RIMKLB (ENSMLUG00000016553)	MFAP5 (ENSMLUG00000007890)	AICDA (ENSMLUG00000007881) #17	ENSMLUG00000012233	GDF3 (ENSMLUG00000013330) #19	ENSMLUG00000030648	ENSMLUG00000030580 #20	ENSMLUG00000004862 #21	ENSMLUG00000026617	FOXJ2 (ENSMLUG00000004866) #22	C3AR1 (ENSMLUG00000000650) #23	NECAP1 (ENSMLUG00000007096) #24	CLEC4A (ENSMLUG00000029132)	CLEC6A (ENSMLUG00000013722)	CLEC4D (ENSMLUG00000027823) #25	CLEC4E (ENSMLUG00000011581) #26	ENSMLUG00000028443	CD163 (ENSMLUG00000013459) #27	ENSMLUG00000029332 #29	ENSMLUG00000009346 #30	CLSTN3 (ENSMLUG00000009304) #31	RBP5 (ENSMLUG00000009297) #32	C1R (ENSMLUG00000009230) #34	C1S (ENSMLUG00000028357) #35	LPCAT3 (ENSMLUG00000009212) #36
Megabat	MODERN SPECIES	4516																FOXJ2 (ENSPVAG00000006794) #22	C3AR1 (ENSPVAG00000006797) #23
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000171437	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a #29	ENSGT00940000157963.h #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000171437	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00390000001799.i.b	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000171437	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303.s	ENSGT00390000001799.i.b	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00390000008732.a.b.k.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000155436.f	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303.s	ENSGT00390000001799.i.b	ENSGT00670000098076.o #20	ENSGT00940000160313 #21	ENSGT00390000008732.a.b.k.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000155436.f	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303.s	ENSGT00390000001799.i.b	ENSGT00670000098076.o #20	ENSGT00940000160313 #21	ENSGT00390000008732.a.b.k.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37	ENSGT00950000183070.a.a	ENSGT00940000159480
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000154685.b	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00390000001799.i.b	ENSGT00670000098076.o.a #20	ENSGT00940000160313 #21	ENSGT00390000008732.a.b.k.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37	ENSGT00950000183070.a.a	ENSGT00940000159480
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000163004	ENSGT00940000154685.b	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00390000001799.i.b	ENSGT00670000098076.o.a #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37	ENSGT00950000183070.a.a	ENSGT00940000159480
Beluga whale	MODERN SPECIES	23	KLRB1 (ENSDLEG00000000356)	ENSDLEG00000000281	A2M (ENSDLEG00000016653)	M6PR (ENSDLEG00000016626)	PHC1 (ENSDLEG00000016599)	A2ML1 (ENSDLEG00000016474)	RIMKLB (ENSDLEG00000016455)	MFAP5 (ENSDLEG00000016415)	AICDA (ENSDLEG00000016308) #17	APOBEC1 (ENSDLEG00000016295) #18	GDF3 (ENSDLEG00000016280) #19	ENSDLEG00000016275	ENSDLEG00000016258 #20	ENSDLEG00000016240 #20	ENSDLEG00000016230 #21	FOXJ2 (ENSDLEG00000016211) #22	C3AR1 (ENSDLEG00000016200) #23	NECAP1 (ENSDLEG00000016184) #24	ENSDLEG00000016176 #25	CLEC4E (ENSDLEG00000016164) #26	CD163 (ENSDLEG00000016084) #27	PEX5 (ENSDLEG00000016025) #30	CLSTN3 (ENSDLEG00000015994) #31	C1RL (ENSDLEG00000015962) #33	C1R (ENSDLEG00000015916) #34	C1S (ENSDLEG00000015889) #35	LPCAT3 (ENSDLEG00000015866) #36	EMG1 (ENSDLEG00000015851) #37	ENSDLEG00000015827	PTPN6 (ENSDLEG00000015801)	CUNH12orf57 (ENSDLEG00000015776)
Narwhal	MODERN SPECIES	313	ENSMMNG00015021106	KLRB1 (ENSMMNG00015021079)	ENSMMNG00015019360	A2M (ENSMMNG00015018530)	M6PR (ENSMMNG00015018472)	PHC1 (ENSMMNG00015018349)	A2ML1 (ENSMMNG00015018220)	RIMKLB (ENSMMNG00015018168)	MFAP5 (ENSMMNG00015017902)	AICDA (ENSMMNG00015017805) #17	APOBEC1 (ENSMMNG00015017776) #18	GDF3 (ENSMMNG00015017751) #19	ENSMMNG00015017735	ENSMMNG00015017709 #20	ENSMMNG00015017628 #21	FOXJ2 (ENSMMNG00015017561) #22	C3AR1 (ENSMMNG00015017541) #23	NECAP1 (ENSMMNG00015017410) #24	ENSMMNG00015017373 #25	CLEC4E (ENSMMNG00015017338) #26	CD163 (ENSMMNG00015017218) #27	PEX5 (ENSMMNG00015016996) #30	CLSTN3 (ENSMMNG00015016951) #31	ENSMMNG00015016913 #32	C1RL (ENSMMNG00015016894) #33	C1R (ENSMMNG00015016776) #34	C1S (ENSMMNG00015016694) #35	LPCAT3 (ENSMMNG00015016648) #36	EMG1 (ENSMMNG00015016611) #37	PHB2 (ENSMMNG00015016550)	PTPN6 (ENSMMNG00015016375)
Vaquita	MODERN SPECIES	1	KLRB1 (ENSPSNG00000007754)	ENSPSNG00000008014	A2M (ENSPSNG00000009242)	M6PR (ENSPSNG00000009343)	PHC1 (ENSPSNG00000009447)	A2ML1 (ENSPSNG00000009647)	RIMKLB (ENSPSNG00000010012)	MFAP5 (ENSPSNG00000010166)	AICDA (ENSPSNG00000010439) #17	APOBEC1 (ENSPSNG00000010489) #18	GDF3 (ENSPSNG00000010531) #19	ENSPSNG00000010564	ENSPSNG00000010609 #20	ENSPSNG00000010708 #21	ENSPSNG00000010891	FOXJ2 (ENSPSNG00000010944) #22	C3AR1 (ENSPSNG00000010984) #23	NECAP1 (ENSPSNG00000011016) #24	CLEC4E (ENSPSNG00000004210) #26	CD163 (ENSPSNG00000004288) #27	PEX5 (ENSPSNG00000004416) #30	CLSTN3 (ENSPSNG00000004552) #31	ENSPSNG00000004595 #32	C1RL (ENSPSNG00000004616) #33	C1R (ENSPSNG00000004652) #34	C1S (ENSPSNG00000004705) #35	LPCAT3 (ENSPSNG00000004738) #36	EMG1 (ENSPSNG00000004766) #37	PHB2 (ENSPSNG00000004823)	PTPN6 (ENSPSNG00000004895)	C12orf57 (ENSPSNG00000004951)
Dolphin	MODERN SPECIES	6299																FOXJ2 (ENSTTRG00000014227) #22	NECAP1 (ENSTTRG00000014260) #24	ENSTTRG00000014263 #25	CLEC4E (ENSTTRG00000014265) #26
Sperm whale	MODERN SPECIES	17	KLRG1 (ENSPCTG00005019373)	M6PR (ENSPCTG00005019326)	PHC1 (ENSPCTG00005019173)	A2ML1 (ENSPCTG00005019045)	RIMKLB (ENSPCTG00005018970)	MFAP5 (ENSPCTG00005018703)	ENSPCTG00005018669	AICDA (ENSPCTG00005018598) #17	APOBEC1 (ENSPCTG00005018531) #18	GDF3 (ENSPCTG00005018502) #19	ENSPCTG00005018471	ENSPCTG00005018452	ENSPCTG00005018291 #20	ENSPCTG00005018259	ENSPCTG00005018062 #21	FOXJ2 (ENSPCTG00005017990) #22	C3AR1 (ENSPCTG00005017964) #23	NECAP1 (ENSPCTG00005017675) #24	CLEC4A (ENSPCTG00005017427)	CLEC4D (ENSPCTG00005017326) #25	CLEC4E (ENSPCTG00005017165) #26	ENSPCTG00005017141	CD163 (ENSPCTG00005017071) #27	PEX5 (ENSPCTG00005016151) #30	CLSTN3 (ENSPCTG00005015936) #31	ENSPCTG00005015861 #32	C1RL (ENSPCTG00005015840) #33	C1R (ENSPCTG00005015646) #34	ENSPCTG00005015599	C1S (ENSPCTG00005015425) #35	ENSPCTG00005015407
Blue whale	MODERN SPECIES	1	M6PR (ENSBMSG00010019669)	PHC1 (ENSBMSG00010019500)	A2ML1 (ENSBMSG00010019207)	ENSBMSG00010019138	MFAP5 (ENSBMSG00010018979)	AICDA (ENSBMSG00010018895) #17	APOBEC1 (ENSBMSG00010018859) #18	GDF3 (ENSBMSG00010018832) #19	ENSBMSG00010018811	ENSBMSG00010018720	ENSBMSG00010018707	ENSBMSG00010018689	ENSBMSG00010018656 #20	ENSBMSG00010018632	ENSBMSG00010018556 #21	FOXJ2 (ENSBMSG00010018501) #22	C3AR1 (ENSBMSG00010018483) #23	NECAP1 (ENSBMSG00010018365) #24	CLEC4A (ENSBMSG00010018063)	ENSBMSG00010018012 #25	CLEC4E (ENSBMSG00010017941) #26	CD163 (ENSBMSG00010017704) #27	ENSBMSG00010016887 #29	ENSBMSG00010016794	PEX5 (ENSBMSG00010016544) #30	CLSTN3 (ENSBMSG00010016426) #31	RBP5 (ENSBMSG00010016389) #32	C1RL (ENSBMSG00010016364) #33	C1R (ENSBMSG00010016210) #34	ENSBMSG00010016157	C1S (ENSBMSG00010016127) #35
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00390000001799.i.b	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000171437	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a.c.a.a.a.b #29	ENSGT00940000157963.g.b.a.c.a.b #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Yarkand deer	MODERN SPECIES	14	A2M (ENSCHYG00000015054)	KLRG1 (ENSCHYG00000015923)	M6PR (ENSCHYG00000016061)	PHC1 (ENSCHYG00000016241)	A2ML1 (ENSCHYG00000016719)	ENSCHYG00000017311	MFAP5 (ENSCHYG00000017513)	AICDA (ENSCHYG00000018200) #17	APOBEC1 (ENSCHYG00000018261) #18	GDF3 (ENSCHYG00000018385) #19	ENSCHYG00000018431	ENSCHYG00000018488	ENSCHYG00000018516	ENSCHYG00000018549 #20	ENSCHYG00000018623 #21	FOXJ2 (ENSCHYG00000018749) #22	C3AR1 (ENSCHYG00000018949) #23	ENSCHYG00000018966	ENSCHYG00000018991	NECAP1 (ENSCHYG00000019019) #24	CLEC4A (ENSCHYG00000019282)	CLEC6A (ENSCHYG00000019360)	ENSCHYG00000019410	CLEC4D (ENSCHYG00000019431) #25	CLEC4E (ENSCHYG00000019478) #26	CD163 (ENSCHYG00000019545) #27	ENSCHYG00000019670	ENSCHYG00000019724 #29	ENSCHYG00000020146 #29	ENSCHYG00000021319	PEX5 (ENSCHYG00000021374) #30
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00390000001799.i.b	ENSGT00670000098076 #20	ENSGT00940000160313.u.a #21	ENSGT00940000171437	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT01030000234579.A.b.db.a	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a.c.a.a.a.b #29	ENSGT00940000158463.m	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00390000001799.i.b	ENSGT00670000098076 #20	ENSGT00940000160313.u.a #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT01030000234579.A.b.db.a	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a.c.a.a.a.b #29	ENSGT00940000158463.m	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33
Caprinae	ANCESTRAL SPECIES		ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00390000001799.i.b	ENSGT00670000098076 #20	ENSGT00940000160313.v #21	ENSGT00940000160313.u.a #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT01030000234579.A.b.db.a	ENSGT00940000155987.b #27	ENSGT00940000158385.b	ENSGT00940000157963.g.b.a.c.a.a.a.b #29	ENSGT00940000157963.g.b.a.c.a.a.a.a.a.b #29	ENSGT00940000157963.g.b.a.d.b.a #29	ENSGT00940000157963.g.b.a.d.a.b.a #29	ENSGT00940000157963.g.b.a.c.a.b.b.a #29	ENSGT00940000158463.m
Goat	MODERN SPECIES	24	KLRG1 (ENSCHIG00000008744)	ENSCHIG00000016884	M6PR (ENSCHIG00000009040)	PHC1 (ENSCHIG00000025324)	A2ML1 (ENSCHIG00000012525)	RIMKLB (ENSCHIG00000022916)	MFAP5 (ENSCHIG00000019360)	AICDA (ENSCHIG00000012409) #17	APOBEC1 (ENSCHIG00000011898) #18	GDF3 (ENSCHIG00000011728) #19	ENSCHIG00000010073	ENSCHIG00000016865	ENSCHIG00000013745	NANOG (ENSCHIG00000012222) #20	SLC2A3 (ENSCHIG00000012243) #21	FOXJ2 (ENSCHIG00000020862) #22	C3AR1 (ENSCHIG00000007611) #23	NECAP1 (ENSCHIG00000012033) #24	CLEC4A (ENSCHIG00000023034)	CLEC6A (ENSCHIG00000007701)	CLEC4D (ENSCHIG00000011494) #25	CLEC4E (ENSCHIG00000013565) #26	CD163 (ENSCHIG00000015726) #27	ENSCHIG00000019704	ENSCHIG00000013145 #29	ENSCHIG00000015796 #29	ENSCHIG00000012690 #29	ENSCHIG00000021895 #29	ENSCHIG00000025467	ENSCHIG00000011461	ENSCHIG00000017095
Rambouillet Sheep	MODERN SPECIES	19	A2M (ENSOARG00020005617)	ENSOARG00020006475 #29	ENSOARG00020006889 #29	KLRG1 (ENSOARG00020007411)	M6PR (ENSOARG00020007510)	PHC1 (ENSOARG00020007609)	RIMKLB (ENSOARG00020008326)	MFAP5 (ENSOARG00020008398)	AICDA (ENSOARG00020008611) #17	ENSOARG00020008640 #18	ENSOARG00020008721	ENSOARG00020008757 #20	ENSOARG00020008788 #21	ENSOARG00020008900 #29	SLC2A3 (ENSOARG00020011245) #21	FOXJ2 (ENSOARG00020011501) #22	C3AR1 (ENSOARG00020011667) #23	NECAP1 (ENSOARG00020011712) #24	CLEC4A (ENSOARG00020012104)	CLEC6A (ENSOARG00020012502)	ENSOARG00020012587 #26	ENSOARG00020012662	CD163 (ENSOARG00020012750) #27	ENSOARG00020013635	ENSOARG00020013715 #29	ENSOARG00020013950 #29	ENSOARG00020016060 #26	ENSOARG00020016142	ENSOARG00020016176 #29	ENSOARG00020016311 #29	ENSOARG00020016510 #29
Bovinae	ANCESTRAL SPECIES	10	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00390000001799.i.b	ENSGT00670000098076 #20	ENSGT00940000160313.u.a #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a.c.a.a.a.b #29	ENSGT00940000157963.g.b.a.c.a.b #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Bos	ANCESTRAL SPECIES	2	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000018141.i.a.b.b.a.a.b.a.b.b	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303.w	ENSGT00390000001799.i.b	ENSGT00670000098076 #20	ENSGT00940000160313.u.a #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00910000144115.a.y	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a.c.a.a.a.b #29	ENSGT00940000157963.g.b.a.d.a.a #29	ENSGT00940000157963.g.b.a.d.b.d #29	ENSGT00940000157963.g.a.a.a.a #29	ENSGT00940000157963.g.a.a.b #29	ENSGT00940000157963.g.b.a.d.b.c #29
Bos_a	ANCESTRAL SPECIES	3	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000018141.i.a.b.b.a.a.b.a.b.b	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303.w	ENSGT00390000001799.i.b	ENSGT00670000098076.r #20	ENSGT00940000160313.u.a #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a.c.a.a.a.b #29
Domestic yak	MODERN SPECIES	24	A2M (ENSBGRG00000011872)	KLRG1 (ENSBGRG00000011666)	M6PR (ENSBGRG00000011531)	PHC1 (ENSBGRG00000011231)	ENSBGRG00000011201	A2ML1 (ENSBGRG00000010450)	RIMKLB (ENSBGRG00000010296)	MFAP5 (ENSBGRG00000009855)	AICDA (ENSBGRG00000009800) #17	APOBEC1 (ENSBGRG00000009737) #18	GDF3 (ENSBGRG00000009725) #19	ENSBGRG00000009703	ENSBGRG00000009696	ENSBGRG00000009658 #20	ENSBGRG00000009442 #21	FOXJ2 (ENSBGRG00000009305) #22	C3AR1 (ENSBGRG00000009274) #23	NECAP1 (ENSBGRG00000009058) #24	CLEC4A (ENSBGRG00000009013)	ENSBGRG00000008989	CLEC6A (ENSBGRG00000008945)	CLEC4D (ENSBGRG00000008883) #25	CLEC4E (ENSBGRG00000008833) #26	CD163 (ENSBGRG00000008424) #27	ENSBGRG00000008394
Wild yak	MODERN SPECIES	2228														ENSBMUG00000014497 #20	ENSBMUG00000014623 #21	FOXJ2 (ENSBMUG00000014684) #22	C3AR1 (ENSBMUG00000014685) #23	NECAP1 (ENSBMUG00000014727) #24	CLEC4A (ENSBMUG00000014744)	ENSBMUG00000014763	CLEC6A (ENSBMUG00000014778)	CLEC4D (ENSBMUG00000014794) #25	CLEC4E (ENSBMUG00000014820) #26	CD163 (ENSBMUG00000014854) #27	ENSBMUG00000014869	ENSBMUG00000014927 #29
Bos_b	ANCESTRAL SPECIES	22	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000018141.i.a.b.b.a.a.b.a.b.b	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534.a #19	ENSGT00800000124303.w	ENSGT00390000001799.i.b	ENSGT00670000098076 #20	ENSGT00940000160313.u.a #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00910000144115.a.y	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.b.a #29	ENSGT00940000157963.g.b.a.d.a.b.c.a #29	ENSGT00940000157963.g.b.a.d.a.a #29	ENSGT00940000157963.g.b.a.d.b.d #29	ENSGT00940000157963.g.a.a.a.a #29	ENSGT00940000157963.g.b.a.d.b.c #29
Hybrid Bos Indicus	MODERN SPECIES	24	KLRG1 (ENSBIXG00005013073)	M6PR (ENSBIXG00005013098)	PHC1 (ENSBIXG00005007442)	ENSBIXG00005013214	A2ML1 (ENSBIXG00005013391)	RIMKLB (ENSBIXG00005013453)	MFAP5 (ENSBIXG00005013612)	AICDA (ENSBIXG00005013648) #17	APOBEC1 (ENSBIXG00005013681) #18	ENSBIXG00005013702 #19	ENSBIXG00005013707	ENSBIXG00005013723	ENSBIXG00005001688 #20	ENSBIXG00005013767 #21	ENSBIXG00005013791	FOXJ2 (ENSBIXG00005013812) #22	C3AR1 (ENSBIXG00005013827) #23	NECAP1 (ENSBIXG00005013901) #24	CLEC4A (ENSBIXG00005013931)	ENSBIXG00005013950	CLEC6A (ENSBIXG00005013962)	CLEC4D (ENSBIXG00005013972) #25	CLEC4E (ENSBIXG00005001759) #26	CD163 (ENSBIXG00005014054) #27	ENSBIXG00005014074	ENSBIXG00005014613 #29	ENSBIXG00005002126 #29	ENSBIXG00005014843 #29	ENSBIXG00005014983 #29	ENSBIXG00005002206 #29	ENSBIXG00005015182 #29
Cow	MODERN SPECIES	24	ENSBTAG00000049220	A2M (ENSBTAG00000018137)	KLRG1 (ENSBTAG00000013640)	M6PR (ENSBTAG00000018207)	PHC1 (ENSBTAG00000018205)	A2ML1 (ENSBTAG00000004097)	RIMKLB (ENSBTAG00000003291)	MFAP5 (ENSBTAG00000000310)	AICDA (ENSBTAG00000018849) #17	APOBEC1 (ENSBTAG00000014683) #18	ENSBTAG00000023192 #19	DPPA3 (ENSBTAG00000046609)	ENSBTAG00000040450	NANOG (ENSBTAG00000020916) #20	SLC2A3 (ENSBTAG00000004556) #21	FOXJ2 (ENSBTAG00000019742) #22	C3AR1 (ENSBTAG00000019741) #23	NECAP1 (ENSBTAG00000020237) #24	CLEC4A (ENSBTAG00000038490)	CLEC6A (ENSBTAG00000023635)	CLEC4E (ENSBTAG00000012185) #26	CLEC4D (ENSBTAG00000039347) #25	CD163 (ENSBTAG00000019669) #27	ENSBTAG00000053242	ENSBTAG00000053486 #29	ENSBTAG00000054128	WC-7 (ENSBTAG00000051330) #29	ENSBTAG00000048875 #29	WC1-12 (ENSBTAG00000052355) #29	ENSBTAG00000024318 #29	ENSBTAG00000052511 #29
American bison	MODERN SPECIES	3197		A2M (ENSBBBG00000016291)	KLRG1 (ENSBBBG00000016240)	M6PR (ENSBBBG00000016215)	PHC1 (ENSBBBG00000004020)	A2ML1 (ENSBBBG00000004002)	RIMKLB (ENSBBBG00000016007)	MFAP5 (ENSBBBG00000003971)	AICDA (ENSBBBG00000015797) #17	APOBEC1 (ENSBBBG00000003934) #18	GDF3 (ENSBBBG00000015778) #19	ENSBBBG00000015764	ENSBBBG00000015754	ENSBBBG00000015749 #20	ENSBBBG00000015733 #21	FOXJ2 (ENSBBBG00000003454) #22	C3AR1 (ENSBBBG00000015614) #23	NECAP1 (ENSBBBG00000007560) #24	ENSBBBG00000015566	ENSBBBG00000015559	CLEC6A (ENSBBBG00000015551)	CLEC4D (ENSBBBG00000015538) #25	CLEC4E (ENSBBBG00000015525) #26	CD163 (ENSBBBG00000015508) #27	ENSBBBG00000003850	ENSBBBG00000015433 #29	ENSBBBG00000001299 #29	ENSBBBG00000001433 #29	ENSBBBG00000014135 #29
Siberian musk deer	MODERN SPECIES	1248	A2M (ENSMMSG00000023144)	KLRG1 (ENSMMSG00000023132)	M6PR (ENSMMSG00000023120)	PHC1 (ENSMMSG00000023090)	A2ML1 (ENSMMSG00000023022)	RIMKLB (ENSMMSG00000023005)	MFAP5 (ENSMMSG00000022963)	AICDA (ENSMMSG00000022951) #17	APOBEC1 (ENSMMSG00000022946) #18	GDF3 (ENSMMSG00000022943) #19	ENSMMSG00000022939	ENSMMSG00000022934	ENSMMSG00000022930 #20	ENSMMSG00000022924 #21	ENSMMSG00000022913	FOXJ2 (ENSMMSG00000022905) #22	C3AR1 (ENSMMSG00000022903) #23	NECAP1 (ENSMMSG00000022888) #24	CLEC4A (ENSMMSG00000022875)	CLEC6A (ENSMMSG00000022867)	ENSMMSG00000022849 #25	CLEC4E (ENSMMSG00000022832) #26	ENSMMSG00000022819	CD163 (ENSMMSG00000022774) #27	ENSMMSG00000022744	ENSMMSG00000022714 #29
Camelidae	ANCESTRAL SPECIES	17	ENSGT00940000158779.rb.a	ENSGT00940000158779.qb	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000157963.h #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT00390000000305 #37	ENSGT00950000183070.a.a	ENSGT00940000159480
Arabian camel	MODERN SPECIES	27	ENSCDRG00005021528	ENSCDRG00005021525	ENSCDRG00005021514	A2M (ENSCDRG00005021498)	KLRG1 (ENSCDRG00005021490)	M6PR (ENSCDRG00005021483)	PHC1 (ENSCDRG00005021476)	A2ML1 (ENSCDRG00005021453)	RIMKLB (ENSCDRG00005021433)	MFAP5 (ENSCDRG00005021384)	AICDA (ENSCDRG00005021362) #17	APOBEC1 (ENSCDRG00005021358) #18	GDF3 (ENSCDRG00005021354) #19	ENSCDRG00005021352 #20	ENSCDRG00005021346 #21	FOXJ2 (ENSCDRG00005021338) #22	C3AR1 (ENSCDRG00005021333) #23	NECAP1 (ENSCDRG00005021322) #24	ENSCDRG00005021317 #25	CLEC4E (ENSCDRG00005021309) #26	CD163 (ENSCDRG00005021289) #27	ENSCDRG00005021278 #29	ENSCDRG00005020025 #29	PEX5 (ENSCDRG00005019720) #30	CLSTN3 (ENSCDRG00005019691) #31	RBP5 (ENSCDRG00005019669) #32	C1RL (ENSCDRG00005019656) #33	C1R (ENSCDRG00005019633) #34	C1S (ENSCDRG00005019604) #35	EMG1 (ENSCDRG00005019592) #37	PHB2 (ENSCDRG00005019555)
Suina	ANCESTRAL SPECIES	4	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000169178	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000171437	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.g.b.a #29	ENSGT00940000157963.h #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Pig	MODERN SPECIES	13	ENSSSCG00000000659	ENSSSCG00000024402	A2M (ENSSSCG00000000660)	KLRG1 (ENSSSCG00000000663)	M6PR (ENSSSCG00000040743)	PHC1 (ENSSSCG00000000661)	A2ML1 (ENSSSCG00000000664)	RIMKLB (ENSSSCG00000000665)	MFAP5 (ENSSSCG00000031712)	AICDA (ENSSSCG00000000667) #17	APOBEC1 (ENSSSCG00000000668) #18	GDF3 (ENSSSCG00000000669) #19	ENSSSCG00000047604	NANOG (ENSSSCG00000040403) #20	ENSSSCG00000022925 #21	FOXJ2 (ENSSSCG00000039580) #22	NECAP1 (ENSSSCG00000025179) #24	ENSSSCG00000060315	ENSSSCG00000031242 #25	ENSSSCG00000038418 #26	CD163 (ENSSSCG00000033146) #27	ENSSSCG00000058930 #29	ENSSSCG00000042161	ENSSSCG00000034914 #29	PEX5 (ENSSSCG00000025252) #30	CLSTN3 (ENSSSCG00000000672) #31	RBP5 (ENSSSCG00000054936) #32	C1RL (ENSSSCG00000033913) #33	C1R (ENSSSCG00000060530) #34	C1S (ENSSSCG00000055651) #35	LPCAT3 (ENSSSCG00000027205) #36
Chacoan peccary	MODERN SPECIES	901	A2M (ENSCWAG00000007775)	KLRG1 (ENSCWAG00000007707)	M6PR (ENSCWAG00000007671)	PHC1 (ENSCWAG00000007589)	A2ML1 (ENSCWAG00000007421)	RIMKLB (ENSCWAG00000007376)	MFAP5 (ENSCWAG00000007222)	AICDA (ENSCWAG00000007177) #17	APOBEC1 (ENSCWAG00000007158) #18	ENSCWAG00000007142	GDF3 (ENSCWAG00000007125) #19	ENSCWAG00000007096	ENSCWAG00000007066 #20	ENSCWAG00000006991 #21	ENSCWAG00000006952	FOXJ2 (ENSCWAG00000006931) #22	C3AR1 (ENSCWAG00000006915) #23	NECAP1 (ENSCWAG00000006815) #24	CLEC4A (ENSCWAG00000006595)	CLEC4D (ENSCWAG00000006470) #25	CLEC4E (ENSCWAG00000006398) #26	ENSCWAG00000006365	CD163 (ENSCWAG00000006131) #27	ENSCWAG00000006094	ENSCWAG00000006079 #29	ENSCWAG00000006066 #29	ENSCWAG00000006006 #29	PEX5 (ENSCWAG00000005784) #30	ENSCWAG00000005724 #31	RBP5 (ENSCWAG00000005695) #32	C1RL (ENSCWAG00000005659) #33
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161053 #22
Common shrew	MODERN SPECIES	3934																ENSSARG00000005895 #22
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Primates	ANCESTRAL SPECIES	6	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Lemuriformes	ANCESTRAL SPECIES	41	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Lemuriformes_a	ANCESTRAL SPECIES	33	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Greater bamboo lemur	MODERN SPECIES	1231															ENSPSMG00000007591 #21	FOXJ2 (ENSPSMG00000007470) #22	C3AR1 (ENSPSMG00000007437) #23	NECAP1 (ENSPSMG00000007404) #24	CLEC4A (ENSPSMG00000007337)	CLEC6A (ENSPSMG00000007308)	CLEC4D (ENSPSMG00000007300) #25	CLEC4E (ENSPSMG00000007288) #26
Coquerels sifaka	MODERN SPECIES	128		A2M (ENSPCOG00000021109)	KLRG1 (ENSPCOG00000018705)	M6PR (ENSPCOG00000014985)	PHC1 (ENSPCOG00000021640)	A2ML1 (ENSPCOG00000023058)	RIMKLB (ENSPCOG00000015009)	MFAP5 (ENSPCOG00000023526)	ENSPCOG00000019228 #17	APOBEC1 (ENSPCOG00000013957) #18	GDF3 (ENSPCOG00000025144) #19	DPPA3 (ENSPCOG00000022180)	ENSPCOG00000019057	ENSPCOG00000025681 #20	ENSPCOG00000009702 #21	FOXJ2 (ENSPCOG00000005417) #22	ENSPCOG00000026746	NECAP1 (ENSPCOG00000019762) #24	CLEC4A (ENSPCOG00000017101)	CLEC6A (ENSPCOG00000016396)	CLEC4D (ENSPCOG00000023414) #25	CLEC4E (ENSPCOG00000017330) #26	CD163 (ENSPCOG00000015026) #27	CD163L1 (ENSPCOG00000001924)	PEX5 (ENSPCOG00000017563) #30	CLSTN3 (ENSPCOG00000022319) #31	RBP5 (ENSPCOG00000024308) #32	C1RL (ENSPCOG00000025155) #33	C1R (ENSPCOG00000021412) #34	C1S (ENSPCOG00000018942) #35	LPCAT3 (ENSPCOG00000021530) #36
Mouse lemur	MODERN SPECIES	29	M6PR (ENSMICG00000014416)	PHC1 (ENSMICG00000014385)	A2ML1 (ENSMICG00000014342)	ENSMICG00000032577	MFAP5 (ENSMICG00000010386)	AICDA (ENSMICG00000011695) #17	APOBEC1 (ENSMICG00000043645) #18	GDF3 (ENSMICG00000046148) #19	CLEC4C (ENSMICG00000015582)	ENSMICG00000036052	NANOGNB (ENSMICG00000041549)	ENSMICG00000002228 #20	ENSMICG00000015536 #21	ENSMICG00000044018	ENSMICG00000038014	FOXJ2 (ENSMICG00000032171) #22	C3AR1 (ENSMICG00000035199) #23	NECAP1 (ENSMICG00000027959) #24	CLEC4A (ENSMICG00000043762)	CLEC6A (ENSMICG00000034509)	ENSMICG00000029258	CLEC4D (ENSMICG00000028843) #25	CLEC4E (ENSMICG00000033022) #26	CD163 (ENSMICG00000005428) #27	CD163L1 (ENSMICG00000007470)	ENSMICG00000046864	ENSMICG00000009549 #30	CLSTN3 (ENSMICG00000009538) #31	RBP5 (ENSMICG00000044689) #32	C1RL (ENSMICG00000033633) #33	C1R (ENSMICG00000002784) #34
Bushbaby	MODERN SPECIES	219				A2M (ENSOGAG00000015791)	M6PR (ENSOGAG00000005610)	PHC1 (ENSOGAG00000005604)	A2ML1 (ENSOGAG00000011443)	RIMKLB (ENSOGAG00000011440)	MFAP5 (ENSOGAG00000029917)	AICDA (ENSOGAG00000026770) #17	APOBEC1 (ENSOGAG00000026415) #18	GDF3 (ENSOGAG00000012886) #19	DPPA3 (ENSOGAG00000024813)	ENSOGAG00000026339 #20	ENSOGAG00000012944 #21	FOXJ2 (ENSOGAG00000029902) #22	C3AR1 (ENSOGAG00000006356) #23	NECAP1 (ENSOGAG00000006358) #24	CLEC6A (ENSOGAG00000003347)	CLEC4D (ENSOGAG00000009259) #25	CLEC4E (ENSOGAG00000000965) #26	CD163 (ENSOGAG00000014466) #27	ENSOGAG00000028448 #29	PEX5 (ENSOGAG00000010757) #30	CLSTN3 (ENSOGAG00000025517) #31	RBP5 (ENSOGAG00000010756) #32	C1RL (ENSOGAG00000010755) #33	C1R (ENSOGAG00000011095) #34	C1S (ENSOGAG00000006982) #35	LPCAT3 (ENSOGAG00000006978) #36	EMG1 (ENSOGAG00000006975) #37
Haplorrhini	ANCESTRAL SPECIES	59									ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076 #20	ENSGT00940000162491	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000162495 #33	ENSGT00940000162526 #32	ENSGT00950000183086.a.b #31	ENSGT00940000156605 #30	ENSGT00940000162316	ENSGT00390000002365.x.c.a	ENSGT00940000164229	ENSGT00560000078483	ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00670000098076.i.a.b #20	ENSGT00940000162491.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000162526 #32	ENSGT00950000183086.a.b #31	ENSGT00940000156605 #30	ENSGT00940000162316	ENSGT00940000164229	ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076.i.a.b #20	ENSGT00940000162491.a.d	ENSGT00670000098076.i.a.a.b #20	ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00940000154677.g.b	ENSGT00390000017736.a	ENSGT00390000014577.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00950000183086.a.b #31	ENSGT00940000156605 #30	ENSGT00940000162316	ENSGT00390000002365.x.c.a	ENSGT00940000164229	ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076.i.a.b #20	ENSGT00940000162491.a.d	ENSGT00670000098076.i.a.a.b #20	ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a.g #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00940000154677.g.b	ENSGT00390000017736.a	ENSGT00390000014577.a.i	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000156605 #30	ENSGT00940000162316	ENSGT00390000002365.x.c.a	ENSGT00940000164229	ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076.i.a.b #20	ENSGT00940000162491.a.d	ENSGT00670000098076.i.a.a.b #20	ENSGT00940000162491.a.c	ENSGT01030000235022.h.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a.g #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00940000154677.g.b	ENSGT00390000017736.a	ENSGT00390000014577.a.i	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00950000183086.a.b #31	ENSGT00940000156605 #30	ENSGT00940000162316	ENSGT00940000164229	ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076.i.a.b #20	ENSGT00940000162491.a.d	ENSGT00670000098076.i.a.a.b #20	ENSGT00940000162491.a.c	ENSGT01030000235022.h.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a.g #24	ENSGT00940000158835	ENSGT00940000163626.e	ENSGT00910000144208.g.b	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00940000154677.g.b	ENSGT00390000017736.a	ENSGT00390000014577.a.i	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00950000183086.a.b #31	ENSGT00940000156605 #30	ENSGT00940000162316	ENSGT00940000164229	ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076.i.a.b #20	ENSGT00940000162491.a.d	ENSGT00670000098076.i.a.a.b #20	ENSGT00940000162491.a.c	ENSGT01030000235022.h.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a.g #24	ENSGT00940000158835	ENSGT00940000163626.e.a	ENSGT00910000144208.g.b	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00940000154677.g.b	ENSGT00390000017736.a	ENSGT00390000014577.a.i	ENSGT00940000163018	ENSGT00940000156612	ENSGT00390000002109
Pan	ANCESTRAL SPECIES	31	ENSGT00950000183086.a.b #31	ENSGT00940000156605 #30	ENSGT00940000162316	ENSGT00940000164229	ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303.c	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076.i.a.b #20	ENSGT00940000162491.a.d	ENSGT00670000098076.i.a.a.b #20	ENSGT00940000162491.a.c	ENSGT01030000235022.h.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a.g #24	ENSGT00940000158835	ENSGT00940000163626.e.a	ENSGT00940000161948.a.b.b
Bonobo	MODERN SPECIES	3	RBP5 (ENSPPAG00000027394) #32	CLSTN3 (ENSPPAG00000032428) #31	PEX5 (ENSPPAG00000040706) #30	ACSM4 (ENSPPAG00000031185)	CD163L1 (ENSPPAG00000043132)	CD163 (ENSPPAG00000036221) #27	ENSPPAG00000040606	APOBEC1 (ENSPPAG00000027657) #18	GDF3 (ENSPPAG00000034082) #19	ENSPPAG00000032961	CLEC4C (ENSPPAG00000036408)	ENSPPAG00000038801	ENSPPAG00000003679 #20	SLC2A14 (ENSPPAG00000012353)	ENSPPAG00000028239	FOXJ2 (ENSPPAG00000039446) #22	C3AR1 (ENSPPAG00000020605) #23	NECAP1 (ENSPPAG00000043088) #24	CLEC4A (ENSPPAG00000037837)	ENSPPAG00000042585 #20	SLC2A3 (ENSPPAG00000018335)	ENSPPAG00000034945	CLEC6A (ENSPPAG00000028446)	CLEC4D (ENSPPAG00000038051) #25	ENSPPAG00000040574 #26	AICDA (ENSPPAG00000038169) #17	ENSPPAG00000034360	MFAP5 (ENSPPAG00000039297)	RIMKLB (ENSPPAG00000029802)	A2ML1 (ENSPPAG00000036011)	PHC1 (ENSPPAG00000030042)
Chimpanzee	MODERN SPECIES	3	ACSM4 (ENSPTRG00000034486)	CD163L1 (ENSPTRG00000004612)	CD163 (ENSPTRG00000004613) #27	PTPN11 (ENSPTRG00000042397)	ENSPTRG00000050222	APOBEC1 (ENSPTRG00000004614) #18	GDF3 (ENSPTRG00000004615) #19	DPPA3 (ENSPTRG00000004617)	CLEC4C (ENSPTRG00000004618)	NANOGNB (ENSPTRG00000029808)	NANOG (ENSPTRG00000029807) #20	SLC2A14 (ENSPTRG00000004624)	ENSPTRG00000048998 #20	SLC2A3 (ENSPTRG00000004626)	ENSPTRG00000046592	FOXJ2 (ENSPTRG00000004629) #22	C3AR1 (ENSPTRG00000004630) #23	NECAP1 (ENSPTRG00000023277) #24	CLEC4A (ENSPTRG00000004631)	ZNF705A (ENSPTRG00000034337)	ENSPTRG00000031266	ENSPTRG00000049794	FAM90A1 (ENSPTRG00000019957)	ENSPTRG00000048676	ENSPTRG00000046414	CLEC6A (ENSPTRG00000029793)	CLEC4D (ENSPTRG00000004638) #25	CLEC4E (ENSPTRG00000004639) #26	AICDA (ENSPTRG00000004640) #17	ENSPTRG00000048991	MFAP5 (ENSPTRG00000023433)
Human	MODERN SPECIES	3	C1RL (ENSG00000139178) #33	RBP5 (ENSG00000139194) #32	CLSTN3 (ENSG00000139182) #31	PEX5 (ENSG00000139197) #30	ACSM4 (ENSG00000215009)	CD163L1 (ENSG00000177675)	CD163 (ENSG00000177575) #27	APOBEC1 (ENSG00000111701) #18	GDF3 (ENSG00000184344) #19	DPPA3 (ENSG00000187569)	CLEC4C (ENSG00000198178)	NANOGNB (ENSG00000205857)	NANOG (ENSG00000111704) #20	SLC2A14 (ENSG00000173262)	SLC2A3 (ENSG00000059804)	FOXJ2 (ENSG00000065970) #22	C3AR1 (ENSG00000171860) #23	NECAP1 (ENSG00000089818) #24	CLEC4A (ENSG00000111729)	ZNF705A (ENSG00000196946)	FAM90A1 (ENSG00000171847)	CLEC6A (ENSG00000205846)	CLEC4D (ENSG00000166527) #25	CLEC4E (ENSG00000166523) #26	AICDA (ENSG00000111732) #17	MFAP5 (ENSG00000197614)	RIMKLB (ENSG00000166532)	A2ML1 (ENSG00000166535)	PHC1 (ENSG00000111752)	M6PR (ENSG00000003056)	KLRG1 (ENSG00000139187)
Gorilla	MODERN SPECIES	3	CLSTN3 (ENSGGOG00000011560) #31	PEX5 (ENSGGOG00000003280) #30	ACSM4 (ENSGGOG00000003288)	CD163L1 (ENSGGOG00000026018)	CD163 (ENSGGOG00000024564) #27	ENSGGOG00000039009	GDF3 (ENSGGOG00000012422) #19	ENSGGOG00000013040	CLEC4C (ENSGGOG00000022960)	NANOGNB (ENSGGOG00000026302)	NANOGP8 (ENSGGOG00000013955) #20	SLC2A14 (ENSGGOG00000016813)	ENSGGOG00000028196 #20	SLC2A3 (ENSGGOG00000037419)	ENSGGOG00000025469	ENSGGOG00000022463 #22	C3AR1 (ENSGGOG00000014899) #23	NECAP1 (ENSGGOG00000010233) #24	CLEC4A (ENSGGOG00000022730)	ENSGGOG00000009930	FAM90A1 (ENSGGOG00000013167)	ENSGGOG00000022480	CLEC6A (ENSGGOG00000024119)	CLEC4D (ENSGGOG00000007892) #25	CLEC4E (ENSGGOG00000012219) #26	AICDA (ENSGGOG00000003338) #17	ENSGGOG00000024007	ENSGGOG00000022717	RIMKLB (ENSGGOG00000000332)	A2ML1 (ENSGGOG00000004629)	PHC1 (ENSGGOG00000010735)
Orangutan	MODERN SPECIES	3	ENSPPYG00000039124	ENSPPYG00000037359	CD163 (ENSPPYG00000004227) #27	APOBEC1 (ENSPPYG00000004228) #18	GDF3 (ENSPPYG00000004229) #19	DPPA3 (ENSPPYG00000004230)	CLEC4C (ENSPPYG00000004231)	NANOGNB (ENSPPYG00000004232)	ENSPPYG00000037456	ENSPPYG00000033157 #20	SLC2A14 (ENSPPYG00000004234)	ENSPPYG00000035865	ENSPPYG00000004233 #20	SLC2A3 (ENSPPYG00000004235)	ENSPPYG00000036549	FOXJ2 (ENSPPYG00000004236) #22	C3AR1 (ENSPPYG00000004237) #23	NECAP1 (ENSPPYG00000004238) #24	CLEC4A (ENSPPYG00000004239)	ENSPPYG00000017210	CLEC6A (ENSPPYG00000004240)	CLEC4D (ENSPPYG00000030687) #25	CLEC4E (ENSPPYG00000004241) #26	AICDA (ENSPPYG00000004242) #17	MFAP5 (ENSPPYG00000004243)	RIMKLB (ENSPPYG00000004244)	A2ML1 (ENSPPYG00000004245)	PHC1 (ENSPPYG00000004246)	M6PR (ENSPPYG00000004247)	KLRG1 (ENSPPYG00000004248)	A2M (ENSPPYG00000004250)
Gibbon	MODERN SPECIES	15	CLSTN3 (ENSNLEG00000005169) #31	PEX5 (ENSNLEG00000005190) #30	ACSM4 (ENSNLEG00000005246)	CD163L1 (ENSNLEG00000005255)	CD163 (ENSNLEG00000005300) #27	APOBEC1 (ENSNLEG00000005342) #18	GDF3 (ENSNLEG00000005350) #19	DPPA3 (ENSNLEG00000030982)	ENSNLEG00000030253	ENSNLEG00000005356	ENSNLEG00000015091 #20	ENSNLEG00000028990	SLC2A14 (ENSNLEG00000005363)	ENSNLEG00000033161	ENSNLEG00000001728	FOXJ2 (ENSNLEG00000001730) #22	C3AR1 (ENSNLEG00000001738) #23	ENSNLEG00000001743 #24	CLEC4A (ENSNLEG00000001752)	CLEC4D (ENSNLEG00000001828) #25	CLEC4E (ENSNLEG00000001893) #26	AICDA (ENSNLEG00000001917) #17	ENSNLEG00000028482	MFAP5 (ENSNLEG00000002089)	ENSNLEG00000030974	A2ML1 (ENSNLEG00000002230)	PHC1 (ENSNLEG00000002262)	M6PR (ENSNLEG00000031875)	KLRG1 (ENSNLEG00000002364)	A2M (ENSNLEG00000002368)	PZP (ENSNLEG00000002652)
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00940000156605 #30	ENSGT00940000162316	ENSGT00390000002365.x.d.d	ENSGT00940000164229	ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076.i.a.b.g.a.b.b #20	ENSGT00670000098076.i.a.b.g.a.a #20	ENSGT00940000162491.a.d	ENSGT00670000098076.i.a.a.b #20	ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00940000154677.g.b	ENSGT00390000017736.a	ENSGT00390000014577.a.k.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00940000156605 #30	ENSGT00940000162316	ENSGT00390000002365.x.d.d	ENSGT00940000164229	ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00400000025247	ENSGT00670000098076.i.a.b.g.a.b.b #20	ENSGT00670000098076.i.a.b.g.a.a #20	ENSGT00940000162491.a.d	ENSGT00670000098076.i.a.a.b #20	ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a.k.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00940000159852	ENSGT00940000160365	ENSGT01040000242039	ENSGT00910000147076	ENSGT00390000005388	ENSGT00940000157164	ENSGT00390000015016	ENSGT00940000153377.A	ENSGT00940000158990	ENSGT00940000154318.A.c.b	ENSGT00940000159508	ENSGT00730000111783.c.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.e.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.b	ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000154655.a.c.b	ENSGT00390000018559.s.b	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a.k.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT01030000235044	ENSGT00390000014547.d.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.b.a.a.a.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.b.a.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.b.a.a.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.e.b.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.b.a.a.a.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.b.a.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.a.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.b.b.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.b.b.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.a.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.e.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.b	ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000154655.a.c.b	ENSGT00390000018559.s.b	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a.k.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109
Cercopithecinae_d	ANCESTRAL SPECIES	120															ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000154655.a.c.b	ENSGT00390000018559.s.b	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a.k.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296
Sooty mangabey	MODERN SPECIES	126															SLC2A3 (ENSCATG00000036615)	FOXJ2 (ENSCATG00000032799) #22	NECAP1 (ENSCATG00000030770) #24	CLEC4A (ENSCATG00000013322)	CLEC6A (ENSCATG00000040225)	ENSCATG00000042128	ENSCATG00000024314	CLEC4D (ENSCATG00000033491) #25	CLEC4E (ENSCATG00000033767) #26	AICDA (ENSCATG00000039986) #17	MFAP5 (ENSCATG00000041145)	ENSCATG00000035315	A2ML1 (ENSCATG00000030717)	PHC1 (ENSCATG00000035524)	M6PR (ENSCATG00000031181)	ENSCATG00000031927	KLRG1 (ENSCATG00000032979)
Drill	MODERN SPECIES	1269															SLC2A3 (ENSMLEG00000034710)	FOXJ2 (ENSMLEG00000036835) #22	NECAP1 (ENSMLEG00000042652) #24	CLEC4A (ENSMLEG00000006555)	CLEC6A (ENSMLEG00000033281)	ENSMLEG00000031031	ENSMLEG00000031477	CLEC4D (ENSMLEG00000032215) #25	CLEC4E (ENSMLEG00000028798) #26	AICDA (ENSMLEG00000040938) #17	ENSMLEG00000039759 #17	MFAP5 (ENSMLEG00000031278)	ENSMLEG00000015289
Olive baboon	MODERN SPECIES	19	TAS2R42 (ENSPANG00000043074)	ENSPANG00000041174	SMIM10L1 (ENSPANG00000040554)	ENSPANG00000035943	ENSPANG00000041403	ENSPANG00000040714	ENSPANG00000050373	ENSPANG00000046207	ENSPANG00000037325	ENSPANG00000042346	ENSPANG00000033585	ENSPANG00000042295	TAS2R20 (ENSPANG00000045642)	TAS2R50 (ENSPANG00000011881)	ENSPANG00000004279	FOXJ2 (ENSPANG00000019708) #22	C3AR1 (ENSPANG00000047211) #23	NECAP1 (ENSPANG00000009521) #24	CLEC4A (ENSPANG00000007775)	CLEC6A (ENSPANG00000004869)	CLEC4D (ENSPANG00000050548) #25	CLEC4E (ENSPANG00000017047) #26	ENSPANG00000039892	AICDA (ENSPANG00000017883) #17	MFAP5 (ENSPANG00000007774)	ENSPANG00000044574	RIMKLB (ENSPANG00000017669)	A2ML1 (ENSPANG00000014886)	ENSPANG00000031015	ENSPANG00000038497	ENSPANG00000047766
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000159508	ENSGT00730000111783.c.b	ENSGT00730000111783.c.a	ENSGT01100000263477.A.b.a.a.a.b	ENSGT00730000111783.d	ENSGT00390000014547.d.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.e.b.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.b.a.a.a.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.b.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.a.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.b.b.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.a.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.e.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.b	ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000154655.a.c.b	ENSGT00390000018559.s.b	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a.k.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00390000015016	ENSGT00940000153377.A	ENSGT00940000158990	ENSGT00940000154318.A.c.a	ENSGT00940000159508	ENSGT00730000111783.c.b	ENSGT00730000111783.c.a.a.a	ENSGT01100000263477.A.b.a.a.a.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.b.a.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.a.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.b.b.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.a.a.a.b	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.e.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.b	ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a.k.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000163609	ENSGT00950000182970.B
Crab-eating macaque	MODERN SPECIES	2	DUSP16 (ENSMFAG00000037347)	BORCS5 (ENSMFAG00000033117)	ENSMFAG00000057103	MANSC1 (ENSMFAG00000031449)	LRP6 (ENSMFAG00000036458)	BCL2L14 (ENSMFAG00000001577)	ENSMFAG00000055319	ENSMFAG00000055510	ETV6 (ENSMFAG00000000725)	ENSMFAG00000056236	ENSMFAG00000041751	ENSMFAG00000050303	ENSMFAG00000061629	SLC2A3 (ENSMFAG00000045551)	ENSMFAG00000048629	FOXJ2 (ENSMFAG00000035860) #22	C3AR1 (ENSMFAG00000062507) #23	NECAP1 (ENSMFAG00000031784) #24	CLEC4A (ENSMFAG00000036426)	ENSMFAG00000054803	CLEC6A (ENSMFAG00000063094)	CLEC4D (ENSMFAG00000041454) #25	CLEC4E (ENSMFAG00000044330) #26	AICDA (ENSMFAG00000064606) #17	MFAP5 (ENSMFAG00000064192)	ENSMFAG00000051799	ENSMFAG00000060428	A2ML1 (ENSMFAG00000045869)	PHC1 (ENSMFAG00000007626)	M6PR (ENSMFAG00000003259)	KLRG1 (ENSMFAG00000003591)
Rhesus	MODERN SPECIES	2	LRP6 (ENSMMUG00000023317)	BCL2L14 (ENSMMUG00000023315)	ETV6 (ENSMMUG00000014370)	ENSMMUG00000041623	ENSMMUG00000064931	ENSMMUG00000055308	TAS2R42 (ENSMMUG00000049431)	ENSMMUG00000053021	TAS2R46 (ENSMMUG00000042870)	ENSMMUG00000054225	ENSMMUG00000050696	ENSMMUG00000055742	TAS2R20 (ENSMMUG00000056428)	TAS2R50 (ENSMMUG00000021005)	SLC2A3 (ENSMMUG00000046124)	FOXJ2 (ENSMMUG00000015256) #22	C3AR1 (ENSMMUG00000032156) #23	NECAP1 (ENSMMUG00000015253) #24	CLEC4A (ENSMMUG00000051173)	CLEC6A (ENSMMUG00000013698)	CLEC4D (ENSMMUG00000013703) #25	CLEC4E (ENSMMUG00000013706) #26	AICDA (ENSMMUG00000019134) #17	MFAP5 (ENSMMUG00000010747)	RIMKLB (ENSMMUG00000022676)	A2ML1 (ENSMMUG00000022680)	PHC1 (ENSMMUG00000017843)	M6PR (ENSMMUG00000017846)	KLRG1 (ENSMMUG00000001418)	PZP (ENSMMUG00000003238)	ENSMMUG00000056741
Pig-tailed macaque	MODERN SPECIES	295															SLC2A3 (ENSMNEG00000028914)	FOXJ2 (ENSMNEG00000014243) #22	NECAP1 (ENSMNEG00000016801) #24	CLEC4A (ENSMNEG00000034072)	CLEC6A (ENSMNEG00000031194)	ENSMNEG00000031715	ENSMNEG00000034957	CLEC4D (ENSMNEG00000035899) #25	CLEC4E (ENSMNEG00000034990) #26	AICDA (ENSMNEG00000043421) #17	MFAP5 (ENSMNEG00000038379)	ENSMNEG00000043510	A2ML1 (ENSMNEG00000033497)	PHC1 (ENSMNEG00000035308)	M6PR (ENSMNEG00000028838)	ENSMNEG00000029807	KLRG1 (ENSMNEG00000030196)
Vervet Monkey	MODERN SPECIES	2	C1S (ENSCSAG00000010067) #35	C1RL (ENSCSAG00000009944) #33	RBP5 (ENSCSAG00000009936) #32	CLSTN3 (ENSCSAG00000009922) #31	PEX5 (ENSCSAG00000009909) #30	ACSM4 (ENSCSAG00000009890)	ENSCSAG00000009860	CD163L1 (ENSCSAG00000009836)	CD163 (ENSCSAG00000009826) #27	APOBEC1 (ENSCSAG00000009817) #18	GDF3 (ENSCSAG00000009810) #19	CLEC4C (ENSCSAG00000009801)	ENSCSAG00000009790 #20	SLC2A14 (ENSCSAG00000009774)	SLC2A3 (ENSCSAG00000009751)	FOXJ2 (ENSCSAG00000009745) #22	C3AR1 (ENSCSAG00000019223) #23	NECAP1 (ENSCSAG00000009739) #24	CLEC4A (ENSCSAG00000009733)	CLEC6A (ENSCSAG00000009723)	CLEC4D (ENSCSAG00000009705) #25	CLEC4E (ENSCSAG00000009687) #26	AICDA (ENSCSAG00000009663) #17	MFAP5 (ENSCSAG00000009659)	RIMKLB (ENSCSAG00000009651)	A2ML1 (ENSCSAG00000009610)	PHC1 (ENSCSAG00000009518)	M6PR (ENSCSAG00000009501)	KLRG1 (ENSCSAG00000009493)	A2M (ENSCSAG00000009480)	PZP (ENSCSAG00000009465)
Rhinopithecus	ANCESTRAL SPECIES	137													ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.e.a	ENSGT01100000263477.A.b.a.a.b.a.a.a.a.b.f.b	ENSGT00940000162491.a.c	ENSGT00940000161053 #22	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00910000148134	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00940000154677.g.b	ENSGT00390000017736.a	ENSGT00390000014577.a.k.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296
Black snub-nosed monkey	MODERN SPECIES	1176															SLC2A3 (ENSRBIG00000043849)	FOXJ2 (ENSRBIG00000042526) #22	NECAP1 (ENSRBIG00000001663) #24	CLEC4A (ENSRBIG00000032324)	CLEC6A (ENSRBIG00000035492)	ENSRBIG00000027018	CLEC4D (ENSRBIG00000028964) #25	CLEC4E (ENSRBIG00000029081) #26	ENSRBIG00000006703	AICDA (ENSRBIG00000026659) #17	MFAP5 (ENSRBIG00000039461)	ENSRBIG00000044995	A2ML1 (ENSRBIG00000027686)	ENSRBIG00000044582	PHC1 (ENSRBIG00000044365)	M6PR (ENSRBIG00000024291)	KLRG1 (ENSRBIG00000005150)
Golden snub-nosed monkey	MODERN SPECIES	1983													ENSRROG00000026127	ENSRROG00000013447	SLC2A3 (ENSRROG00000045454)	FOXJ2 (ENSRROG00000032303) #22	NECAP1 (ENSRROG00000043387) #24	CLEC4A (ENSRROG00000029248)	CLEC6A (ENSRROG00000033999)	ENSRROG00000043127	CLEC4D (ENSRROG00000043601) #25	CLEC4E (ENSRROG00000037092) #26	ENSRROG00000027291	ENSRROG00000039525	AICDA (ENSRROG00000032866) #17	ENSRROG00000032310	MFAP5 (ENSRROG00000008374)	ENSRROG00000032902	A2ML1 (ENSRROG00000036769)	PHC1 (ENSRROG00000038246)	M6PR (ENSRROG00000040189)
Platyrrhini	ANCESTRAL SPECIES	57										ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076.i.a.a.b #20	ENSGT00940000162491.a.a.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00910000147248	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b
Cebidae	ANCESTRAL SPECIES	2										ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076.i.a.a.a.b #20	ENSGT00940000162491.a.a.a	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b	ENSGT00940000163609
Cebidae_a	ANCESTRAL SPECIES	5													ENSGT00940000155987.b #27	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000161053 #22	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000155345.n	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a	ENSGT00940000163018	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b	ENSGT00940000163609
Capuchin	MODERN SPECIES	469			CD163 (ENSCCAG00000037775) #27	ENSCCAG00000036422	ENSCCAG00000026419	ENSCCAG00000027282	ENSCCAG00000020433	ENSCCAG00000029802	APOBEC1 (ENSCCAG00000022258) #18	GDF3 (ENSCCAG00000024344) #19	ENSCCAG00000035290	NANOGNB (ENSCCAG00000032425)	ENSCCAG00000027004	ENSCCAG00000019466	ENSCCAG00000037121	FOXJ2 (ENSCCAG00000006397) #22	NECAP1 (ENSCCAG00000015830) #24	ENSCCAG00000015141	CLEC4A (ENSCCAG00000033083)	ENSCCAG00000006775	ENSCCAG00000021038	CLEC6A (ENSCCAG00000029120)	CLEC4D (ENSCCAG00000030690) #25	CLEC4E (ENSCCAG00000033330) #26	AICDA (ENSCCAG00000030398) #17	MFAP5 (ENSCCAG00000028419)	RIMKLB (ENSCCAG00000020509)	A2ML1 (ENSCCAG00000014289)	PHC1 (ENSCCAG00000033492)	ENSCCAG00000031956	KLRG1 (ENSCCAG00000027540)
Bolivian squirrel monkey	MODERN SPECIES	60																FOXJ2 (ENSSBOG00000019603) #22	ENSSBOG00000027329	ENSSBOG00000033325	NECAP1 (ENSSBOG00000021996) #24	CLEC4A (ENSSBOG00000020390)	ENSSBOG00000032901	ENSSBOG00000021993	CLEC6A (ENSSBOG00000023125)	ENSSBOG00000020459	CLEC4D (ENSSBOG00000036094) #25	CLEC4E (ENSSBOG00000021053) #26	AICDA (ENSSBOG00000035758) #17	MFAP5 (ENSSBOG00000032198)	RIMKLB (ENSSBOG00000020124)	A2ML1 (ENSSBOG00000031521)	ENSSBOG00000021193
Marmoset	MODERN SPECIES	21	ENSCJAG00000081130	ENSCJAG00000005234	ENSCJAG00000072529	CD163 (ENSCJAG00000005332) #27	ENSCJAG00000079699	ENSCJAG00000074967	APOBEC1 (ENSCJAG00000005398) #18	ENSCJAG00000086680	GDF3 (ENSCJAG00000005406) #19	ENSCJAG00000072636	ENSCJAG00000071581	ENSCJAG00000018999 #20	ENSCJAG00000043823	ENSCJAG00000081220	ENSCJAG00000018988	FOXJ2 (ENSCJAG00000018955) #22	C3AR1 (ENSCJAG00000083855) #23	NECAP1 (ENSCJAG00000018934) #24	CLEC4A (ENSCJAG00000018929)	CLEC6A (ENSCJAG00000037433)	CLEC4D (ENSCJAG00000080376) #25	CLEC4E (ENSCJAG00000018899) #26	AICDA (ENSCJAG00000018856) #17	ENSCJAG00000077911	MFAP5 (ENSCJAG00000018846)	RIMKLB (ENSCJAG00000018810)	ENSCJAG00000074054	A2ML1 (ENSCJAG00000018756)	ENSCJAG00000073845	PHC1 (ENSCJAG00000018715)	PZP (ENSCJAG00000018648)
Mas night monkey	MODERN SPECIES	1079										ENSANAG00000024394 #20	ENSANAG00000020136	ENSANAG00000032495	ENSANAG00000026003	ENSANAG00000024998 #21	ENSANAG00000037404	FOXJ2 (ENSANAG00000024184) #22	ENSANAG00000023975	NECAP1 (ENSANAG00000022127) #24	ENSANAG00000030527	CLEC4A (ENSANAG00000026901)	ENSANAG00000031579	ENSANAG00000031568	CLEC6A (ENSANAG00000035639)
Tarsier	MODERN SPECIES	6736																FOXJ2 (ENSTSYG00000037165) #22	NECAP1 (ENSTSYG00000005153) #24	CLEC4A (ENSTSYG00000001154)	CLEC6A (ENSTSYG00000010349)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Tree shrew	MODERN SPECIES	2779																ENSTBEG00000015045 #22	C3AR1 (ENSTBEG00000015172) #23	NECAP1 (ENSTBEG00000015178) #24
Glires	ANCESTRAL SPECIES	4	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00940000162867	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35
Lagomorpha	ANCESTRAL SPECIES	37	ENSGT00940000158779	ENSGT00940000154685.a	ENSGT00940000163004	ENSGT00940000161987	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36	ENSGT00390000000305 #37	ENSGT00950000183070.a.a	ENSGT00940000159480
Rabbit	MODERN SPECIES	19	ENSOCUG00000026970	CD69 (ENSOCUG00000009055)	KLRG1 (ENSOCUG00000017827)	M6PR (ENSOCUG00000017823)	PHC1 (ENSOCUG00000003600)	A2ML1 (ENSOCUG00000014012)	RIMKLB (ENSOCUG00000013997)	ENSOCUG00000035657	MFAP5 (ENSOCUG00000002407)	AICDA (ENSOCUG00000023739) #17	APOBEC1 (ENSOCUG00000025736) #18	GDF3 (ENSOCUG00000013747) #19	ENSOCUG00000022961	ENSOCUG00000013783 #20	ENSOCUG00000008575 #21	FOXJ2 (ENSOCUG00000004313) #22	C3AR1 (ENSOCUG00000007438) #23	NECAP1 (ENSOCUG00000004309) #24	CLEC4A (ENSOCUG00000010935)	CLEC4D (ENSOCUG00000012312) #25	CLEC4E (ENSOCUG00000009195) #26	ENSOCUG00000022788	CD163 (ENSOCUG00000003958) #27	ENSOCUG00000027440 #29	ENSOCUG00000039239	PEX5 (ENSOCUG00000005856) #30	CLSTN3 (ENSOCUG00000014499) #31	RBP5 (ENSOCUG00000023679) #32	C1R (ENSOCUG00000014480) #34	C1S (ENSOCUG00000014468) #35	LPCAT3 (ENSOCUG00000014461) #36
Pika	MODERN SPECIES	10567																FOXJ2 (ENSOPRG00000015650) #22	C3AR1 (ENSOPRG00000015664) #23	NECAP1 (ENSOPRG00000015668) #24
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000163775	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000163004	ENSGT00940000154685.b	ENSGT00940000158779	ENSGT00940000163775	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000162491	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835.n	ENSGT00940000162867	ENSGT00800000124303	ENSGT00940000158835.o.a.b	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963 #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00940000161987	ENSGT00940000158779	ENSGT00940000164557	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000162867	ENSGT00670000098076 #20	ENSGT00940000160313.l #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835.n	ENSGT01100000263477.A.b.a.a.a.a	ENSGT01100000263477.A.b.a.b.b	ENSGT00940000159340	ENSGT00940000157871	ENSGT00390000003156.a.b	ENSGT00390000008117	ENSGT00730000111779	ENSGT00940000154752.C	ENSGT00940000164228	ENSGT00940000154558	ENSGT00940000160107	ENSGT00940000164373
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000161987	ENSGT00940000158779	ENSGT00940000164557	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000162867	ENSGT00670000098076 #20	ENSGT00940000160313.l #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835.o.b	ENSGT01100000263477.A.b.a.a.a.a	ENSGT01100000263477.A.b.a.b.b	ENSGT00940000159340	ENSGT00940000157871	ENSGT00390000003156.a.b	ENSGT00390000008117.f	ENSGT00940000154752.C	ENSGT00940000154558	ENSGT00390000008117.e	ENSGT00940000164228	ENSGT00940000160107	ENSGT00940000164373
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000158835.o.a.a	ENSGT00940000162719	ENSGT00940000161987	ENSGT00940000158779	ENSGT00940000164557	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00670000098076 #20	ENSGT00940000160313.l #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835.n	ENSGT00940000159340	ENSGT00940000157871	ENSGT00390000003156.a.b	ENSGT00940000154558	ENSGT00390000008117.e	ENSGT00940000160107	ENSGT00940000164373	ENSGT00940000156876.p	ENSGT00730000111328	ENSGT00940000161941	ENSGT00940000161161.b	ENSGT00940000161945
Long-tailed chinchilla	MODERN SPECIES	120	ENSCLAG00000016397	CLEC12A (ENSCLAG00000016917)	CD69 (ENSCLAG00000016341)	ENSCLAG00000014193	ENSCLAG00000014477	ENSCLAG00000015472	A2M (ENSCLAG00000014334)	KLRG1 (ENSCLAG00000016032)	M6PR (ENSCLAG00000016742)	ENSCLAG00000015780	RIMKLB (ENSCLAG00000016207)	MFAP5 (ENSCLAG00000015349)	APOBEC1 (ENSCLAG00000014645) #18	ENSCLAG00000016751 #20	ENSCLAG00000014816 #21	FOXJ2 (ENSCLAG00000015501) #22	C3AR1 (ENSCLAG00000016345) #23	NECAP1 (ENSCLAG00000016261) #24	ENSCLAG00000016209	ENSCLAG00000014536	YBX3 (ENSCLAG00000016030)	STYK1 (ENSCLAG00000014276)	MAGOHB (ENSCLAG00000016608)	KLRK1 (ENSCLAG00000016399)	ENSCLAG00000015963	KLRD1 (ENSCLAG00000015230)	ENSCLAG00000014861	GABARAPL1 (ENSCLAG00000015208)	OLR1 (ENSCLAG00000017281)	ENSCLAG00000018052	TMEM52B (ENSCLAG00000015300)
Degu	MODERN SPECIES	329	ENSODEG00000001750	A2M (ENSODEG00000001603)	KLRG1 (ENSODEG00000001549)	ENSODEG00000001533	M6PR (ENSODEG00000001500)	ENSODEG00000001480	ENSODEG00000000953	ENSODEG00000018638	ENSODEG00000000893	ENSODEG00000001561	MFAP5 (ENSODEG00000001438)	AICDA (ENSODEG00000001235) #17	ENSODEG00000001157 #18	ENSODEG00000001117	ENSODEG00000001054	FOXJ2 (ENSODEG00000000985) #22	NECAP1 (ENSODEG00000000959) #24	ENSODEG00000000945	ENSODEG00000001369	ENSODEG00000001335
Guinea pig	MODERN SPECIES	28	ENSCPOG00000025468	ENSCPOG00000037838 #17	ENSCPOG00000003074 #21	APOBEC1 (ENSCPOG00000033068) #18	ENSCPOG00000001939 #19	ENSCPOG00000032695	ENSCPOG00000008888 #20	ENSCPOG00000030440 #17	ENSCPOG00000011295 #21	ENSCPOG00000039255 #17	ENSCPOG00000003749	ENSCPOG00000035729	ENSCPOG00000015516 #19	ENSCPOG00000015181 #21	ENSCPOG00000036952	FOXJ2 (ENSCPOG00000035222) #22	C3AR1 (ENSCPOG00000026687) #23	NECAP1 (ENSCPOG00000000237) #24	ENSCPOG00000005961	ENSCPOG00000040222	ENSCPOG00000033654	ENSCPOG00000003781	TAS2R7 (ENSCPOG00000011334)	YBX3 (ENSCPOG00000011329)	STYK1 (ENSCPOG00000030656)	MAGOHB (ENSCPOG00000012657)	ENSCPOG00000012655	ENSCPOG00000001854	ENSCPOG00000031840	ENSCPOG00000037685	ENSCPOG00000026823
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000000946	ENSHGLG00000001045	ENSHGLG00000049427	ENSHGLG00000034712	RIMKLB (ENSHGLG00000001366)	ENSHGLG00000037387	ENSHGLG00000001443 #17	ENSHGLG00000001495 #18	ENSHGLG00000035224	GDF3 (ENSHGLG00000035808) #19	ENSHGLG00000037867	ENSHGLG00000038901	ENSHGLG00000001512 #20	ENSHGLG00000037606 #21	ENSHGLG00000038978	FOXJ2 (ENSHGLG00000001583) #22	C3AR1 (ENSHGLG00000048639) #23	ENSHGLG00000047023 #24	ENSHGLG00000034631	ENSHGLG00000001291	ENSHGLG00000037595	ENSHGLG00000013657	TAS2R7 (ENSHGLG00000021147)	ENSHGLG00000015495	ENSHGLG00000009598	MAGOHB (ENSHGLG00000038190)	ENSHGLG00000038138	ENSHGLG00000047157	ENSHGLG00000043076	ENSHGLG00000034516	ENSHGLG00000046362
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000161987	ENSGT00940000154685.a	ENSGT00940000155319	ENSGT00940000154685.b	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000162491	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835.n	ENSGT00940000162867	ENSGT00800000124303	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.e.a.b #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32
Marmotini	ANCESTRAL SPECIES	43				ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835.o.a.a	ENSGT00940000158835.n.b	ENSGT00940000162867	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000157963.e.a.b.a.b.b #29	ENSGT00940000157963.e.a.a #29	ENSGT00940000157963.e.b #29	ENSGT00940000162741.j #28
Marmotini_b	ANCESTRAL SPECIES	286														ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835.n.a.a
Arctic ground squirrel	MODERN SPECIES	659													ENSUPAG00010014499 #29	ENSUPAG00010014542 #20	ENSUPAG00010014594 #21	FOXJ2 (ENSUPAG00010014615) #22	C3AR1 (ENSUPAG00010014640) #23	NECAP1 (ENSUPAG00010014656) #24	ENSUPAG00010014662
Squirrel	MODERN SPECIES	489														ENSSTOG00000022241 #20	ENSSTOG00000003250 #21	FOXJ2 (ENSSTOG00000011045) #22	C3AR1 (ENSSTOG00000023824) #23	NECAP1 (ENSSTOG00000010153) #24	ENSSTOG00000011280	ENSSTOG00000013072
Alpin marmot	MODERN SPECIES	122	ENSMMMG00000014723	KLRG1 (ENSMMMG00000014714)	ENSMMMG00000014712	M6PR (ENSMMMG00000014705)	PHC1 (ENSMMMG00000014135)	ENSMMMG00000014126	RIMKLB (ENSMMMG00000014110)	MFAP5 (ENSMMMG00000014090)	AICDA (ENSMMMG00000014079) #17	APOBEC1 (ENSMMMG00000014065) #18	ENSMMMG00000014057	GDF3 (ENSMMMG00000014052) #19	ENSMMMG00000014043	ENSMMMG00000014028 #20	ENSMMMG00000014014 #21	FOXJ2 (ENSMMMG00000013994) #22	C3AR1 (ENSMMMG00000013989) #23	ENSMMMG00000013977 #24	ENSMMMG00000013965	ENSMMMG00000013937	ENSMMMG00000013928	ENSMMMG00000013917	ENSMMMG00000013908	ENSMMMG00000013907	ENSMMMG00000013896	CLEC6A (ENSMMMG00000013839)	CLEC4D (ENSMMMG00000013833) #25	CLEC4E (ENSMMMG00000013820) #26
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005000989 #29	ENSSVLG00005001031 #29	ENSSVLG00005001060	CD163 (ENSSVLG00005001083) #27	ENSSVLG00005001127	ENSSVLG00005001153	ENSSVLG00005001178	CLEC4D (ENSSVLG00005001211) #25	CLEC6A (ENSSVLG00005001235)	ENSSVLG00005001261	ENSSVLG00005001276	ENSSVLG00005001309	ENSSVLG00005001324	ENSSVLG00005001341 #20	ENSSVLG00005001402	FOXJ2 (ENSSVLG00005001472) #22	C3AR1 (ENSSVLG00005001489) #23	NECAP1 (ENSSVLG00005001532) #24	ENSSVLG00005001582	ENSSVLG00005001608	ENSSVLG00005001656	ENSSVLG00005001716	ENSSVLG00005001730	ENSSVLG00005001746	GDF3 (ENSSVLG00005001758) #19	ENSSVLG00005001774	APOBEC1 (ENSSVLG00005001792) #18	AICDA (ENSSVLG00005001822) #17	MFAP5 (ENSSVLG00005001921)	ENSSVLG00005002030	RIMKLB (ENSSVLG00005002054)
Rodentia_B	ANCESTRAL SPECIES	35			ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Kangaroo rat	MODERN SPECIES	388										M6pr (ENSDORG00000010866)	ENSDORG00000010864	Rimklb (ENSDORG00000002432)	ENSDORG00000026277 #17	Apobec1 (ENSDORG00000023717) #18	Slc2a3 (ENSDORG00000024664) #21	Foxj2 (ENSDORG00000026430) #22	ENSDORG00000030144 #23	ENSDORG00000029320	Clec4e (ENSDORG00000004998) #26	Clstn3 (ENSDORG00000009552) #31	C1rl (ENSDORG00000023954) #33	ENSDORG00000029495 #34	ENSDORG00000025857 #35	Lpcat3 (ENSDORG00000009797) #36	Emg1 (ENSDORG00000009795) #37	Phb2 (ENSDORG00000028072)	Ptpn6 (ENSDORG00000001185)	Grcc10 (ENSDORG00000025602)	Eno2 (ENSDORG00000008957)	Lrrc23 (ENSDORG00000008956)	Tpi1 (ENSDORG00000013175)
Myomorpha	ANCESTRAL SPECIES	15	ENSGT00940000161075	ENSGT00940000155908.b	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Muroidea	ANCESTRAL SPECIES	24	ENSGT00940000161075	ENSGT00940000155908.b	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000161075	ENSGT00940000155908.b	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867.b.b	ENSGT00940000162867.b.a	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000157478	ENSGT00940000161075	ENSGT00940000155908.b	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867.b.b	ENSGT00940000162867.b.a	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Cricetidae_B	ANCESTRAL SPECIES	14	ENSGT00940000157478	ENSGT00940000161075	ENSGT00940000155908.b	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867.b.b	ENSGT00940000162867.b.a	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Prairie vole	MODERN SPECIES	84	Tuba8 (ENSMOCG00000020678)	Usp18 (ENSMOCG00000000311)	Slc6a13 (ENSMOCG00000007760)	ENSMOCG00000014478	Iqsec3 (ENSMOCG00000011116)	A2m (ENSMOCG00000007124)	Klrg1 (ENSMOCG00000021687)	M6pr (ENSMOCG00000021061)	ENSMOCG00000000392	Mfap5 (ENSMOCG00000014897)	Aicda (ENSMOCG00000022460) #17	ENSMOCG00000016170 #18	Gdf3 (ENSMOCG00000022799) #19	Nanog (ENSMOCG00000012477) #20	Slc2a3 (ENSMOCG00000020069) #21	Foxj2 (ENSMOCG00000011125) #22	C3ar1 (ENSMOCG00000004819) #23	Necap1 (ENSMOCG00000018598) #24	Clec4a1 (ENSMOCG00000021830)	Clec4a3 (ENSMOCG00000014857)	ENSMOCG00000009898	ENSMOCG00000020096	Clec4n (ENSMOCG00000015908)	Clec4d (ENSMOCG00000010391) #25	Clec4e (ENSMOCG00000000786) #26	Cd163 (ENSMOCG00000016909) #27	ENSMOCG00000002666	Pex5 (ENSMOCG00000017492) #30	ENSMOCG00000000391	Clstn3 (ENSMOCG00000014748) #31	C1rl (ENSMOCG00000011460) #33
Northern American deer mouse	MODERN SPECIES	16	ENSPEMG00000030743	A2m (ENSPEMG00000024245)	ENSPEMG00000030340	ENSPEMG00000000833	Klrg1 (ENSPEMG00000010031)	M6pr (ENSPEMG00000007452)	Phc1 (ENSPEMG00000017198)	Rimklb (ENSPEMG00000018966)	Mfap5 (ENSPEMG00000015102)	Aicda (ENSPEMG00000008352) #17	Apobec1 (ENSPEMG00000023841) #18	Gdf3 (ENSPEMG00000009491) #19	ENSPEMG00000029301	Nanog (ENSPEMG00000012974) #20	Slc2a3 (ENSPEMG00000007634) #21	Foxj2 (ENSPEMG00000011818) #22	C3ar1 (ENSPEMG00000018795) #23	Necap1 (ENSPEMG00000008926) #24	Clec4a1 (ENSPEMG00000007879)	ENSPEMG00000025079	ENSPEMG00000024053	ENSPEMG00000021676	Clec4n (ENSPEMG00000022600)	Clec4d (ENSPEMG00000021801) #25	Clec4e (ENSPEMG00000022603) #26	ENSPEMG00000021552	Cd163 (ENSPEMG00000023074) #27	ENSPEMG00000013047	Pex5 (ENSPEMG00000011167) #30	Clstn3 (ENSPEMG00000012312) #31	C1rl (ENSPEMG00000024503) #33
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00940000161075	ENSGT00940000155908.b	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162495 #33	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36
Chinese hamster chok1gshd	MODERN SPECIES	289													Dppa3 (ENSCGRG00001010222)	Nanog (ENSCGRG00001010639) #20	Slc2a3 (ENSCGRG00001016902) #21	Foxj2 (ENSCGRG00001015215) #22	C3ar1 (ENSCGRG00001014041) #23	ENSCGRG00001014091	Necap1 (ENSCGRG00001015967) #24	Clec4a1 (ENSCGRG00001018195)	Clec4a3 (ENSCGRG00001019861)	ENSCGRG00001020384	Clec4n (ENSCGRG00001014711)	Clec4d (ENSCGRG00001015907) #25	Clec4e (ENSCGRG00001020170) #26	ENSCGRG00001022487	Cd163 (ENSCGRG00001013534) #27	ENSCGRG00001018106	PEX5 (ENSCGRG00001020537) #30	Clstn3 (ENSCGRG00001014128) #31	C1rl (ENSCGRG00001000458) #33
Golden Hamster	MODERN SPECIES	622	Slc6a12 (ENSMAUG00000016005)	Iqsec3 (ENSMAUG00000014844)	A2m (ENSMAUG00000016738)	ENSMAUG00000017104	ENSMAUG00000010289	Klrg1 (ENSMAUG00000015031)	M6pr (ENSMAUG00000004318)	Phc1 (ENSMAUG00000011574)	Rimklb (ENSMAUG00000006866)	Mfap5 (ENSMAUG00000020028)	Aicda (ENSMAUG00000012229) #17	Apobec1 (ENSMAUG00000022167) #18	Gdf3 (ENSMAUG00000013151) #19	ENSMAUG00000013782	Slc2a3 (ENSMAUG00000020352) #21	Foxj2 (ENSMAUG00000013772) #22	C3ar1 (ENSMAUG00000010318) #23	ENSMAUG00000007238 #24	ENSMAUG00000010051	Clec4n (ENSMAUG00000016308)	Clec4d (ENSMAUG00000004749) #25	Clec4e (ENSMAUG00000018571) #26	Cd163 (ENSMAUG00000000759) #27	ENSMAUG00000017972	Pex5 (ENSMAUG00000012548) #30	Clstn3 (ENSMAUG00000007828) #31	C1rl (ENSMAUG00000007953) #33	ENSMAUG00000001230 #34	C1s (ENSMAUG00000017562) #35	Lpcat3 (ENSMAUG00000001241) #36	Emg1 (ENSMAUG00000011093) #37
Murinae	ANCESTRAL SPECIES	4	ENSGT00940000161075	ENSGT00940000155908.b	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867.b.b	ENSGT00940000162867.b.a.c.a.b.a.a	ENSGT00940000162867.a	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Mus	ANCESTRAL SPECIES	12	ENSGT00940000161075	ENSGT00940000155908.b	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867.b.b	ENSGT00940000162867.b.a.c.a.b.a.a	ENSGT00940000162867.a	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000161075	ENSGT00940000155908.b	ENSGT00940000154904.b	ENSGT00940000164557	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867.b.b	ENSGT00940000162867.b.a.d	ENSGT00940000162867.b.a.c.a.a	ENSGT00940000162867.b.a.c.a.b.a.b	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b.v #27	ENSGT00560000078483	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162495 #33
Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000154904.b	ENSGT00940000164557.e.a.b	ENSGT00940000164557.e.a.a	ENSGT00940000164557.e.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303.r	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867.b.b	ENSGT00940000162867.b.a.d	ENSGT00940000162867.b.a.c.a.a	ENSGT00940000162867.b.a.c.a.b.a.b	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606.b	ENSGT00940000163606.a.b.a.a.a	ENSGT00940000163606.a.b.a.b	ENSGT00940000155987.b.v #27	ENSGT00560000078483
Mus_C	ANCESTRAL SPECIES	18	ENSGT00940000154904.b	ENSGT00940000164557.e.a.b	ENSGT00940000164557.e.a.a	ENSGT00940000164557.e.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00800000124303.r	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162867.b.b	ENSGT00940000162867.b.a.d	ENSGT00940000162867.b.a.c.a.a	ENSGT00940000162867.b.a.c.a.b.a.b	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000163606.a.b.b.a	ENSGT00940000163606.a.b.b.b	ENSGT00940000163606.a.a	ENSGT00940000163606.a.b.a.a.a	ENSGT00940000163606.a.b.a.b
Steppe mouse	MODERN SPECIES	2839	ENSMSIG00000029266	M6pr (ENSMSIG00000029265)	Phc1 (ENSMSIG00000029054)	ENSMSIG00000029048	ENSMSIG00000029043	Rimklb (ENSMSIG00000029039)	Mfap5 (ENSMSIG00000028987)	Aicda (ENSMSIG00000028977) #17	ENSMSIG00000028972	Apobec1 (ENSMSIG00000028960) #18	Gdf3 (ENSMSIG00000028955) #19	ENSMSIG00000028942	ENSMSIG00000028938	ENSMSIG00000028935	Slc2a3 (ENSMSIG00000028910) #21	Foxj2 (ENSMSIG00000028893) #22	C3ar1 (ENSMSIG00000028890) #23	Necap1 (ENSMSIG00000028885) #24	Clec4a1 (ENSMSIG00000028871)	Clec4a3 (ENSMSIG00000028862)	Clec4b1 (ENSMSIG00000028845)
spretus	MODERN SPECIES	15	Usp18 (MGP_SPRETEiJ_G0029846)	Slc6a13 (MGP_SPRETEiJ_G0029847)	Slc6a12 (MGP_SPRETEiJ_G0029848)	Iqsec3 (MGP_SPRETEiJ_G0029849)	A2m (MGP_SPRETEiJ_G0029850)	M6pr (MGP_SPRETEiJ_G0029852)	Phc1 (MGP_SPRETEiJ_G0029853)	Rimklb (MGP_SPRETEiJ_G0029854)	Mfap5 (MGP_SPRETEiJ_G0029855)	Aicda (MGP_SPRETEiJ_G0029856) #17	Apobec1 (MGP_SPRETEiJ_G0029857) #18	Gdf3 (MGP_SPRETEiJ_G0029858) #19	Dppa3 (MGP_SPRETEiJ_G0029859)	MGP_SPRETEiJ_G0029860 #20	Slc2a3 (MGP_SPRETEiJ_G0029861) #21	Foxj2 (MGP_SPRETEiJ_G0029862) #22	C3ar1 (MGP_SPRETEiJ_G0029863) #23	Necap1 (MGP_SPRETEiJ_G0029864) #24	Clec4a1 (MGP_SPRETEiJ_G0029865)	Clec4a3 (MGP_SPRETEiJ_G0029866)	Clec4a4 (MGP_SPRETEiJ_G0029867)	Clec4a2 (MGP_SPRETEiJ_G0029868)	MGP_SPRETEiJ_G0029869	Clec4b2 (MGP_SPRETEiJ_G0029870)	Clec4n (MGP_SPRETEiJ_G0029871)	Clec4d (MGP_SPRETEiJ_G0029872) #25	Clec4e (MGP_SPRETEiJ_G0029873) #26	MGP_SPRETEiJ_G0029874	MGP_SPRETEiJ_G0029875	MGP_SPRETEiJ_G0029876	MGP_SPRETEiJ_G0029877
Mouse	MODERN SPECIES	15	A2m (ENSMUSG00000030111)	Gm7298 (ENSMUSG00000108022)	Mug1 (ENSMUSG00000059908)	Mug2 (ENSMUSG00000030131)	Klrg1 (ENSMUSG00000030114)	M6pr (ENSMUSG00000007458)	Phc1 (ENSMUSG00000040669)	Rimklb (ENSMUSG00000040649)	Mfap5 (ENSMUSG00000030116)	Aicda (ENSMUSG00000040627) #17	Apobec1 (ENSMUSG00000040613) #18	Gdf3 (ENSMUSG00000030117) #19	Dppa3 (ENSMUSG00000046323)	Nanog (ENSMUSG00000012396) #20	Slc2a3 (ENSMUSG00000003153) #21	Foxj2 (ENSMUSG00000003154) #22	C3ar1 (ENSMUSG00000040552) #23	Necap1 (ENSMUSG00000030327) #24	Clec4a1 (ENSMUSG00000049037)	Clec4a3 (ENSMUSG00000043832)	Clec4a4 (ENSMUSG00000059639)	Clec4b1 (ENSMUSG00000030147)	Clec4a2 (ENSMUSG00000030148)	Clec4b2 (ENSMUSG00000067767)	Clec4n (ENSMUSG00000023349)	Clec4d (ENSMUSG00000030144) #25	Clec4e (ENSMUSG00000030142) #26	Vmn2r19 (ENSMUSG00000091260)	Vmn2r20 (ENSMUSG00000094145)	Vmn2r21 (ENSMUSG00000093820)	Vmn2r22 (ENSMUSG00000095486)
Ryukyu mouse	MODERN SPECIES	15	MGP_CAROLIEiJ_G0028810	Pex26 (MGP_CAROLIEiJ_G0028811)	Tuba8 (MGP_CAROLIEiJ_G0028812)	Usp18 (MGP_CAROLIEiJ_G0028813)	Slc6a13 (MGP_CAROLIEiJ_G0028814)	MGP_CAROLIEiJ_G0028815	Iqsec3 (MGP_CAROLIEiJ_G0028816)	Klrg1 (MGP_CAROLIEiJ_G0028819)	M6pr (MGP_CAROLIEiJ_G0028820)	Phc1 (MGP_CAROLIEiJ_G0028821)	Rimklb (MGP_CAROLIEiJ_G0028822)	MGP_CAROLIEiJ_G0028823	MGP_CAROLIEiJ_G0028824 #17	MGP_CAROLIEiJ_G0028825 #18	Slc2a3 (MGP_CAROLIEiJ_G0028827) #21	MGP_CAROLIEiJ_G0028828 #22	C3ar1 (MGP_CAROLIEiJ_G0028829) #23	Necap1 (MGP_CAROLIEiJ_G0028830) #24	Clec4a3 (MGP_CAROLIEiJ_G0028831)	Clec4a4 (MGP_CAROLIEiJ_G0028832)	Clec4a2 (MGP_CAROLIEiJ_G0028833)	MGP_CAROLIEiJ_G0028834	MGP_CAROLIEiJ_G0028835	MGP_CAROLIEiJ_G0028836	Clec4d (MGP_CAROLIEiJ_G0028837) #25	MGP_CAROLIEiJ_G0028838 #26	Cd163 (MGP_CAROLIEiJ_G0028839) #27	MGP_CAROLIEiJ_G0028840	MGP_CAROLIEiJ_G0028842 #31	Lpcat3 (MGP_CAROLIEiJ_G0028843) #36	Emg1 (MGP_CAROLIEiJ_G0028844) #37
Shrew mouse	MODERN SPECIES	11	Tuba8 (MGP_PahariEiJ_G0022568)	Usp18 (MGP_PahariEiJ_G0022569)	Slc6a13 (MGP_PahariEiJ_G0022570)	Slc6a12 (MGP_PahariEiJ_G0022571)	Iqsec3 (MGP_PahariEiJ_G0022572)	A2m (MGP_PahariEiJ_G0022573)	MGP_PahariEiJ_G0022574	M6pr (MGP_PahariEiJ_G0022575)	Phc1 (MGP_PahariEiJ_G0022576)	Rimklb (MGP_PahariEiJ_G0022577)	Mfap5 (MGP_PahariEiJ_G0022578)	Aicda (MGP_PahariEiJ_G0022579) #17	MGP_PahariEiJ_G0022580 #18	Gdf3 (MGP_PahariEiJ_G0022581) #19	Slc2a3 (MGP_PahariEiJ_G0022582) #21	Foxj2 (MGP_PahariEiJ_G0022583) #22	C3ar1 (MGP_PahariEiJ_G0022584) #23	Necap1 (MGP_PahariEiJ_G0022585) #24	Clec4a1 (MGP_PahariEiJ_G0022586)	Clec4a3 (MGP_PahariEiJ_G0022587)	Clec4a4 (MGP_PahariEiJ_G0022588)	MGP_PahariEiJ_G0022589	MGP_PahariEiJ_G0022590	Clec4n (MGP_PahariEiJ_G0022591)	Clec4d (MGP_PahariEiJ_G0022592) #25	Clec4e (MGP_PahariEiJ_G0022593) #26	MGP_PahariEiJ_G0022594	MGP_PahariEiJ_G0022595	MGP_PahariEiJ_G0022596	Cd163 (MGP_PahariEiJ_G0022597) #27	MGP_PahariEiJ_G0022598
Rat	MODERN SPECIES	14	Mug2 (ENSRNOG00000065574)	Cpamd8 (ENSRNOG00000065350)	Klrg1 (ENSRNOG00000014918)	M6pr (ENSRNOG00000014992)	Phc1 (ENSRNOG00000015191)	Rimklb (ENSRNOG00000064238)	Mfap5 (ENSRNOG00000015505)	Aicda (ENSRNOG00000015478) #17	Apobec1 (ENSRNOG00000015411) #18	Dppa3 (ENSRNOG00000022950)	Gdf3 (ENSRNOG00000015331) #19	ENSRNOG00000065131	ENSRNOG00000064705	Nanog (ENSRNOG00000008368) #20	Slc2a3 (ENSRNOG00000008376) #21	Foxj2 (ENSRNOG00000009000) #22	C3ar1 (ENSRNOG00000009211) #23	RGD1563551 (ENSRNOG00000068644)	Necap1 (ENSRNOG00000009236) #24	ENSRNOG00000030870	Clec4a1 (ENSRNOG00000042139)	Clec4a3 (ENSRNOG00000010018)	Clec4a2 (ENSRNOG00000030012)	Clec4a (ENSRNOG00000010045)	Clec4b2 (ENSRNOG00000027655)	Clec6a-ps1 (ENSRNOG00000010057)	Clec4d (ENSRNOG00000067848) #25	Clec4e (ENSRNOG00000061394) #26	Vom2r48 (ENSRNOG00000028538)	Vom2r50 (ENSRNOG00000070578)	Vom2r51 (ENSRNOG00000066511)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1885				ENSNGAG00000022392	Klrg1 (ENSNGAG00000023075)	M6pr (ENSNGAG00000014591)	ENSNGAG00000022780	ENSNGAG00000021272	Rimklb (ENSNGAG00000017743)	Mfap5 (ENSNGAG00000012484)	Aicda (ENSNGAG00000023430) #17	Apobec1 (ENSNGAG00000022607) #18	Gdf3 (ENSNGAG00000018140) #19	ENSNGAG00000011538 #20	Slc2a3 (ENSNGAG00000012042) #21	Foxj2 (ENSNGAG00000017980) #22	C3ar1 (ENSNGAG00000014090) #23	Necap1 (ENSNGAG00000015511) #24	Clec4a1 (ENSNGAG00000023338)	ENSNGAG00000023388	ENSNGAG00000009568	Clec4n (ENSNGAG00000022656)	Clec4d (ENSNGAG00000003581) #25	Clec4e (ENSNGAG00000010318) #26	Cd163 (ENSNGAG00000004434) #27	ENSNGAG00000023205	ENSNGAG00000023425	Pex5 (ENSNGAG00000022852) #30	Clstn3 (ENSNGAG00000022664) #31	ENSNGAG00000018451 #32	C1rl (ENSNGAG00000023384) #33
Lesser Egyptian jerboa	MODERN SPECIES	158	ENSJJAG00000018699	Emg1 (ENSJJAG00000018448) #37	Lpcat3 (ENSJJAG00000018031) #36	ENSJJAG00000016716 #35	ENSJJAG00000015111 #34	ENSJJAG00000014098 #33	ENSJJAG00000013518 #32	Clstn3 (ENSJJAG00000013207) #31	ENSJJAG00000010801 #30	Cd163 (ENSJJAG00000008702) #27	Clec4e (ENSJJAG00000001281) #26	Clec4d (ENSJJAG00000000318) #25	ENSJJAG00000000075	Nanog (ENSJJAG00000013576) #20	Slc2a3 (ENSJJAG00000012236) #21	Foxj2 (ENSJJAG00000010589) #22	ENSJJAG00000010195 #24	ENSJJAG00000006274	ENSJJAG00000013693
Atlantogenata	ANCESTRAL SPECIES	5	ENSGT00940000163775	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000162867	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00940000157963.a #29	ENSGT00940000157963.b #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000162495 #33	ENSGT00940000158621 #34
Xenarthra	ANCESTRAL SPECIES	156			ENSGT00940000158779	ENSGT00940000163609	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612.`b	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162938	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00600000085580.d
Sloth	MODERN SPECIES	4933																FOXJ2 (ENSCHOG00000011561) #22	C3AR1 (ENSCHOG00000011574) #23
Armadillo	MODERN SPECIES	1236		ENSDNOG00000036997	ENSDNOG00000003538	ENSDNOG00000030870	ENSDNOG00000005819	ENSDNOG00000049448	RIMKLB (ENSDNOG00000010209)	ENSDNOG00000034322 #17	ENSDNOG00000034856	APOBEC1 (ENSDNOG00000010926) #18	ENSDNOG00000041308	GDF3 (ENSDNOG00000016607) #19	ENSDNOG00000040117	ENSDNOG00000048903 #20	ENSDNOG00000036091 #21	FOXJ2 (ENSDNOG00000001703) #22	C3AR1 (ENSDNOG00000033032) #23	ENSDNOG00000031910 #24	CLEC6A (ENSDNOG00000005595)	CLEC4D (ENSDNOG00000047598) #25	CLEC4E (ENSDNOG00000036368) #26	ENSDNOG00000037100	ENSDNOG00000036294	ENSDNOG00000042559	ENSDNOG00000037871	ENSDNOG00000043160	ENSDNOG00000048716	ENSDNOG00000037366
Afrotheria	ANCESTRAL SPECIES	11	ENSGT00940000158779.c	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000162867	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00940000157963.a #29	ENSGT00940000157963.b #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000158621 #34	ENSGT00940000157473 #35	ENSGT01030000234564.b #36
Tenrec	MODERN SPECIES	8705																ENSETEG00000014640 #22
Afrotheria_a	ANCESTRAL SPECIES	11	ENSGT00940000163123	ENSGT00940000158779.c	ENSGT00940000163775	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190 #18	ENSGT00940000162534 #19	ENSGT00940000162867	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000158835	ENSGT00940000162400 #25	ENSGT00940000160666 #26	ENSGT00940000155987.b #27	ENSGT00940000164229	ENSGT00940000157963.a #29	ENSGT00940000157963.b #29	ENSGT00940000156605 #30	ENSGT00950000183086.a.b #31	ENSGT00940000162526 #32	ENSGT00940000158621 #34	ENSGT01030000234564.b #36	ENSGT00390000000305 #37
Elephant	MODERN SPECIES	108	ENSLAFG00000003324	ENSLAFG00000002095	ENSLAFG00000028486	A2M (ENSLAFG00000010617)	M6PR (ENSLAFG00000010611)	PHC1 (ENSLAFG00000010608)	A2ML1 (ENSLAFG00000017288)	RIMKLB (ENSLAFG00000017469)	MFAP5 (ENSLAFG00000000722)	AICDA (ENSLAFG00000000721) #17	APOBEC1 (ENSLAFG00000030837) #18	GDF3 (ENSLAFG00000005973) #19	CLEC4C (ENSLAFG00000010198)	ENSLAFG00000012934 #20	ENSLAFG00000004432 #21	FOXJ2 (ENSLAFG00000002976) #22	C3AR1 (ENSLAFG00000002977) #23	NECAP1 (ENSLAFG00000002979) #24	ENSLAFG00000022886	ENSLAFG00000010246	ENSLAFG00000029174	CLEC4D (ENSLAFG00000000977) #25	CLEC4E (ENSLAFG00000022194) #26	CD163 (ENSLAFG00000002941) #27	CD163L1 (ENSLAFG00000018264)	ENSLAFG00000032210 #29	ENSLAFG00000028952	ENSLAFG00000031645 #29	PEX5 (ENSLAFG00000006574) #30	CLSTN3 (ENSLAFG00000006568) #31	RBP5 (ENSLAFG00000032292) #32
Hyrax	MODERN SPECIES	4655																FOXJ2 (ENSPCAG00000002771) #22	C3AR1 (ENSPCAG00000002816) #23
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000155840.C	ENSGT00390000007725.A.a	ENSGT00940000161860	ENSGT00940000158576	ENSGT00940000162469	ENSGT00940000162534 #19	ENSGT00940000161190 #18	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000154904.b	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT01060000248575.D.d.c	ENSGT01100000263840	ENSGT00390000013440	ENSGT00390000003753.b	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00940000155840.C	ENSGT00390000007725.A.a	ENSGT00940000161860	ENSGT00940000158576	ENSGT00940000162469	ENSGT00940000162534 #19	ENSGT00940000161190 #18	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000154904.b	ENSGT00670000098076.h #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT01060000248575.D.d.c	ENSGT01100000263840	ENSGT00390000013440	ENSGT00390000003753.b	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a
Diprotodontia	ANCESTRAL SPECIES	16	ENSGT00940000155840.C	ENSGT00390000007725.A.a	ENSGT00940000161860	ENSGT00940000158576	ENSGT00940000162469	ENSGT00940000162534 #19	ENSGT00940000161190 #18	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000154904.b	ENSGT00670000098076.h #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT01060000248575.D.d.c	ENSGT01060000248575.D.d.d.a	ENSGT01100000263658	ENSGT00390000013440	ENSGT00390000003753.b	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197	ENSGT00390000007878	ENSGT00940000158916
Diprotodontia_a	ANCESTRAL SPECIES	18	ENSGT00940000155840.C	ENSGT00390000007725.A.a	ENSGT00940000161860	ENSGT00940000158576	ENSGT00940000162469	ENSGT00940000162534 #19	ENSGT00940000161190 #18	ENSGT00940000158731 #17	ENSGT00390000017736.a	ENSGT00390000014577.a	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000154904.b	ENSGT00670000098076.h #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT01060000248575.D.d.c	ENSGT01060000248575.D.d.d.a	ENSGT01100000263658	ENSGT00390000013440	ENSGT00390000003753.b	ENSGT00390000006233.c.a.b	ENSGT00390000013260.C	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197	ENSGT00390000007878	ENSGT00940000158916
Common wonbat	MODERN SPECIES	1064	ANO2 (ENSVURG00010017773)	NTF3 (ENSVURG00010017728)	KCNA5 (ENSVURG00010017725)	KCNA1 (ENSVURG00010017720)	KCNA6 (ENSVURG00010017719)	GDF3 (ENSVURG00010017714) #19	APOBEC1 (ENSVURG00010017711) #18	AICDA (ENSVURG00010017700) #17	ENSVURG00010017693	MFAP5 (ENSVURG00010017680)	RIMKLB (ENSVURG00010017669)	PHC1 (ENSVURG00010017650)	M6PR (ENSVURG00010017636)	A2M (ENSVURG00010017581)	ENSVURG00010017564 #21	FOXJ2 (ENSVURG00010017548) #22	C3AR1 (ENSVURG00010017541) #23	NECAP1 (ENSVURG00010017533) #24	ENSVURG00010017524	SMCO3 (ENSVURG00010017519)	MGP (ENSVURG00010017511)	ARHGDIB (ENSVURG00010017504)	PDE6H (ENSVURG00010017494)	ENSVURG00010017492	RERG (ENSVURG00010017487)	PTPRO (ENSVURG00010017425)	EPS8 (ENSVURG00010017309)	STRAP (ENSVURG00010017251)	DERA (ENSVURG00010017235)	SLC15A5 (ENSVURG00010017212)	MGST1 (ENSVURG00010017195)
koala	MODERN SPECIES	56	PLEKHG6 (ENSPCIG00000033584)	ENSPCIG00000011779	VWF (ENSPCIG00000011924)	ANO2 (ENSPCIG00000031141)	NTF3 (ENSPCIG00000023966)	GDF3 (ENSPCIG00000023971) #19	APOBEC1 (ENSPCIG00000023973) #18	AICDA (ENSPCIG00000023974) #17	MFAP5 (ENSPCIG00000023975)	RIMKLB (ENSPCIG00000023978)	PHC1 (ENSPCIG00000023981)	M6PR (ENSPCIG00000023982)	A2M (ENSPCIG00000023983)	ENSPCIG00000034798 #20	ENSPCIG00000026603 #21	FOXJ2 (ENSPCIG00000033665) #22	C3AR1 (ENSPCIG00000020622) #23	NECAP1 (ENSPCIG00000020621) #24	ENSPCIG00000033723	ENSPCIG00000020614	ENSPCIG00000031397	ENSPCIG00000033733	ENSPCIG00000020609	SMCO3 (ENSPCIG00000020606)	MGP (ENSPCIG00000020605)	ARHGDIB (ENSPCIG00000020600)	PDE6H (ENSPCIG00000020597)	ENSPCIG00000020593	RERG (ENSPCIG00000031756)	PTPRO (ENSPCIG00000020562)	EPS8 (ENSPCIG00000020544)
Wallaby	MODERN SPECIES	12657																FOXJ2 (ENSMEUG00000008330) #22
Tasmanian devil	MODERN SPECIES	4	ANO2 (ENSSHAG00000030277)	NTF3 (ENSSHAG00000006721)	KCNA5 (ENSSHAG00000011548)	KCNA1 (ENSSHAG00000031762)	ENSSHAG00000027811	ENSSHAG00000026667 #19	ENSSHAG00000008925 #18	ENSSHAG00000008694 #17	ENSSHAG00000028416	RIMKLB (ENSSHAG00000023940)	PHC1 (ENSSHAG00000005292)	M6PR (ENSSHAG00000005206)	ENSSHAG00000002556	ENSSHAG00000024061 #20	ENSSHAG00000030656 #21	ENSSHAG00000017137 #22	C3AR1 (ENSSHAG00000022696) #23	ENSSHAG00000017050 #24	ENSSHAG00000026766	ENSSHAG00000027269	ENSSHAG00000021343	ENSSHAG00000016649	ENSSHAG00000028291	ENSSHAG00000024536	ENSSHAG00000027842	PDE6H (ENSSHAG00000024857)	ENSSHAG00000016216	RERG (ENSSHAG00000024978)	PTPRO (ENSSHAG00000014855)	EPS8 (ENSSHAG00000014124)	STRAP (ENSSHAG00000013427)
Opossum	MODERN SPECIES	7	KCNA5 (ENSMODG00000024849)	KCNA1 (ENSMODG00000024850)	ENSMODG00000028583	KCNA6 (ENSMODG00000018007)	GDF3 (ENSMODG00000018006) #19	APOBEC1 (ENSMODG00000018004) #18	AICDA (ENSMODG00000018002) #17	MFAP5 (ENSMODG00000044262)	RIMKLB (ENSMODG00000017997)	PHC1 (ENSMODG00000017995)	M6PR (ENSMODG00000017991)	A2M (ENSMODG00000017988)	ENSMODG00000017979 #20	ENSMODG00000037935	ENSMODG00000017976 #21	FOXJ2 (ENSMODG00000017974) #22	C3AR1 (ENSMODG00000017972) #23	NECAP1 (ENSMODG00000050831) #24	ENSMODG00000042318	ENSMODG00000024867	ENSMODG00000049152	WBP11 (ENSMODG00000017949)	SMCO3 (ENSMODG00000024869)	MGP (ENSMODG00000017944)	ARHGDIB (ENSMODG00000017941)	PDE6H (ENSMODG00000017940)	RERG (ENSMODG00000038693)	ENSMODG00000045623	EPS8 (ENSMODG00000017925)	STRAP (ENSMODG00000017913)	DERA (ENSMODG00000017903)
Platypus	MODERN SPECIES	87								ENSOANG00000014191	ENSOANG00000014192	ENSOANG00000048621	PHC1 (ENSOANG00000043198)	RIMKLB (ENSOANG00000009466)	AICDA (ENSOANG00000007150) #17	ENSOANG00000037954 #18	ENSOANG00000039108 #21	FOXJ2 (ENSOANG00000003804) #22	ENSOANG00000015996 #23	NECAP1 (ENSOANG00000038718) #24	ENSOANG00000047385	TSPAN9 (ENSOANG00000047553)	TEAD4 (ENSOANG00000001389)	TULP3 (ENSOANG00000001390)	RHNO1 (ENSOANG00000045534)	ENSOANG00000036677	ENSOANG00000046679	ITFG2 (ENSOANG00000029066)	FKBP4 (ENSOANG00000001038)	ENSOANG00000038512	PRMT8 (ENSOANG00000005194)	CRACR2A (ENSOANG00000002166)	PARP11 (ENSOANG00000050791)
Sauria	ANCESTRAL SPECIES	63	ENSGT00940000161796	ENSGT00940000154904.b.m	ENSGT00940000154904.b.n.a.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000154904.b.n.a.a	ENSGT00940000163990.a	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e #18	ENSGT00940000161190.f #18	ENSGT00670000098076 #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000160666 #26	ENSGT00940000162867	ENSGT00940000158835	ENSGT00940000162400 #25
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000154904.b.n.a.b	ENSGT00940000158779	ENSGT00940000154904.b.n.b.a	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000154904.b.n.a.a	ENSGT00940000163990.b.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT01020000230338	ENSGT00940000157200	ENSGT00940000175478	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00390000006066	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000161249	ENSGT00940000155867
Archosauria	ANCESTRAL SPECIES	4	ENSGT00940000154904.b.n.b.a	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000154904.b.m.a.b	ENSGT00940000163990.a	ENSGT00940000163990.b.a.a	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162867	ENSGT00940000160666 #26	ENSGT00940000157200	ENSGT00940000175478	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000170442	ENSGT00390000006066	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225
Aves	ANCESTRAL SPECIES	54	ENSGT00940000158779	ENSGT00940000154904.b.n.b.a	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.a.a	ENSGT00940000163990.b.a.b	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162867	ENSGT00940000160666 #26	ENSGT00940000157200	ENSGT00940000175478	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857	ENSGT00440000033504.B
Neognathae	ANCESTRAL SPECIES	44		ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000154904.b.m.a.b	ENSGT00940000163990.a	ENSGT00940000163990.b.a.a	ENSGT00940000163990.b.a.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162867	ENSGT00940000160666 #26	ENSGT00390000017365.b	ENSGT00940000157200	ENSGT00940000175478	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857
Neognathae_b	ANCESTRAL SPECIES		ENSGT00940000161161.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b	ENSGT00940000154904.b.m.a.b	ENSGT00940000163990.b.a.a	ENSGT00940000163990.b.a.b.a	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162867	ENSGT00940000160666.k #26	ENSGT01000000215449	ENSGT00390000017365.b	ENSGT00940000157200	ENSGT00940000175478	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b	ENSGT00940000154904.b.m.a.b	ENSGT00940000163990.b.a.b.a	ENSGT00940000163990.b.a.b.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000160666.k #26	ENSGT00940000162867	ENSGT01000000215449	ENSGT00390000017365.b	ENSGT00940000157200	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857
Great tit	MODERN SPECIES		KLRG1 (ENSPMJG00000003406)	M6PR (ENSPMJG00000003415)	PHC1 (ENSPMJG00000003426)	ENSPMJG00000003516	ENSPMJG00000003524	ENSPMJG00000003529	RIMKLB (ENSPMJG00000003535)	MFAP5 (ENSPMJG00000003538)	AICDA (ENSPMJG00000003540) #17	ENSPMJG00000003541 #18	ENSPMJG00000003543 #18	ENSPMJG00000003544 #20	ENSPMJG00000003545 #20	ENSPMJG00000003610 #21	ENSPMJG00000003619	FOXJ2 (ENSPMJG00000003623) #22	C3AR1 (ENSPMJG00000003630) #23	NECAP1 (ENSPMJG00000003632) #24	ENSPMJG00000003637	ENSPMJG00000003638	ENSPMJG00000003641	FKBP4 (ENSPMJG00000003646)	ITFG2 (ENSPMJG00000003652)	NRIP2 (ENSPMJG00000003655)	FOXM1 (ENSPMJG00000003659)	RHNO1 (ENSPMJG00000003661)	TULP3 (ENSPMJG00000003673)	TEAD4 (ENSPMJG00000003680)	TSPAN9 (ENSPMJG00000003699)	PARP11 (ENSPMJG00000003713)	CRACR2A (ENSPMJG00000003726)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b	ENSGT00940000154904.b.m.a.b	ENSGT00940000163990.b.a.b.a	ENSGT00940000163990.b.a.b.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000160666.k.a.b #26	ENSGT00390000017365.b.o	ENSGT00940000157200	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857	ENSGT00440000033504.B	ENSGT00940000155867
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b	ENSGT00940000154904.b.m.a.b	ENSGT00940000163990.b.a.b.a	ENSGT00940000163990.b.a.b.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162867	ENSGT00390000017365.b.p	ENSGT00940000157200	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000170442	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857	ENSGT00440000033504.B
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b	ENSGT00940000154904.b.m.a.b	ENSGT00940000163990.b.a.b.a	ENSGT00940000163990.b.a.b.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000160666.k.a.b #26	ENSGT00940000162867	ENSGT00390000017365.b.p	ENSGT00940000157200	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857	ENSGT00440000033504.B
Common canary	MODERN SPECIES	4	M6PR (ENSSCAG00000000059)	PHC1 (ENSSCAG00000000052)	ENSSCAG00000000045	ENSSCAG00000000037	ENSSCAG00000000021	RIMKLB (ENSSCAG00000015305)	ENSSCAG00000015301	ENSSCAG00000015300	AICDA (ENSSCAG00000015295) #17	ENSSCAG00000015291	APOBEC1 (ENSSCAG00000015287) #18	ENSSCAG00000015283	ENSSCAG00000015280 #20	ENSSCAG00000015277 #20	ENSSCAG00000015275 #21	FOXJ2 (ENSSCAG00000015273) #22	C3AR1 (ENSSCAG00000015271) #23	NECAP1 (ENSSCAG00000015270) #24	ENSSCAG00000015269 #26	ENSSCAG00000015266 #26	ENSSCAG00000015264	ENSSCAG00000015260	FKBP4 (ENSSCAG00000015258)	ITFG2 (ENSSCAG00000015250)	ENSSCAG00000015242	FOXM1 (ENSSCAG00000015238)	RHNO1 (ENSSCAG00000015235)	TULP3 (ENSSCAG00000015232)	TEAD4 (ENSSCAG00000015231)	TSPAN9 (ENSSCAG00000015225)	PARP11 (ENSSCAG00000015223)
Zebra finch	MODERN SPECIES		KLRG1 (ENSTGUG00000020922)	M6PR (ENSTGUG00000013099)	PHC1 (ENSTGUG00000013100)	ENSTGUG00000025295	ENSTGUG00000018526	ENSTGUG00000013105	ENSTGUG00000013107	RIMKLB (ENSTGUG00000013112)	ENSTGUG00000025164	AICDA (ENSTGUG00000020635) #17	ENSTGUG00000013118 #18	ENSTGUG00000029648 #18	ENSTGUG00000013121 #20	ENSTGUG00000013123 #20	ENSTGUG00000013125 #21	FOXJ2 (ENSTGUG00000013133) #22	NECAP1 (ENSTGUG00000021257) #24	ENSTGUG00000013138	ENSTGUG00000013145	FKBP4 (ENSTGUG00000013147)	ITFG2 (ENSTGUG00000013150)	NRIP2 (ENSTGUG00000013152)	FOXM1 (ENSTGUG00000013153)	RHNO1 (ENSTGUG00000013156)	TULP3 (ENSTGUG00000013157)	TEAD4 (ENSTGUG00000013161)	TSPAN9 (ENSTGUG00000013167)	PARP11 (ENSTGUG00000013169)	CRACR2A (ENSTGUG00000013170)	PRMT8 (ENSTGUG00000013173)	ENSTGUG00000025182
Medium ground finch	MODERN SPECIES	147	ENSGFOG00000010860	ENSGFOG00000010866	ENSGFOG00000010872	KLRG1 (ENSGFOG00000010878)	M6PR (ENSGFOG00000010883)	PHC1 (ENSGFOG00000010895)	ENSGFOG00000010912	RIMKLB (ENSGFOG00000010970)	MFAP5 (ENSGFOG00000010974)	AICDA (ENSGFOG00000010978) #17	APOBEC1 (ENSGFOG00000010983) #18	ENSGFOG00000010992	ENSGFOG00000010995 #20	ENSGFOG00000011005 #20	ENSGFOG00000011015 #21	FOXJ2 (ENSGFOG00000011026) #22	C3AR1 (ENSGFOG00000011034) #23	NECAP1 (ENSGFOG00000011037) #24	ENSGFOG00000011041	CLEC4E (ENSGFOG00000011052) #26	ENSGFOG00000011059	ENSGFOG00000011075	ENSGFOG00000011068	ENSGFOG00000011080	FKBP4 (ENSGFOG00000011085)	ITFG2 (ENSGFOG00000011089)	ENSGFOG00000011096	FOXM1 (ENSGFOG00000011100)	RHNO1 (ENSGFOG00000011107)	TULP3 (ENSGFOG00000011110)	TEAD4 (ENSGFOG00000011115)
Flycatcher	MODERN SPECIES		KLRG1 (ENSFALG00000007361)	M6PR (ENSFALG00000027874)	PHC1 (ENSFALG00000007352)	ENSFALG00000007340	ENSFALG00000007302	ENSFALG00000007288	ENSFALG00000007284	RIMKLB (ENSFALG00000007270)	MFAP5 (ENSFALG00000007265)	AICDA (ENSFALG00000007261) #17	ENSFALG00000023456 #18	ENSFALG00000007257 #18	ENSFALG00000007255 #20	ENSFALG00000028688 #20	ENSFALG00000007246 #21	FOXJ2 (ENSFALG00000007244) #22	C3AR1 (ENSFALG00000024361) #23	NECAP1 (ENSFALG00000007238) #24	ENSFALG00000027685	ENSFALG00000028082	ENSFALG00000025996	ENSFALG00000014502	EPHB6 (ENSFALG00000004417)	TRPV6 (ENSFALG00000004468)	ENSFALG00000004473	ENSFALG00000014514	ENSFALG00000004478 #27	GSTK1 (ENSFALG00000024201)	ENSFALG00000004498	CASP2 (ENSFALG00000004510)	CLCN1 (ENSFALG00000004517)
Neognathae_c	ANCESTRAL SPECIES		ENSGT00940000154904.b.n.b.b	ENSGT00940000156296.g.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b	ENSGT00940000154904.b.m.a.b	ENSGT00940000163990.b.a.b.a	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000162867	ENSGT01000000215449	ENSGT00390000017365.b	ENSGT00940000157200	ENSGT00940000175478	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857
Kakapo	MODERN SPECIES	20	ENSSHBG00005013237	KLRG1 (ENSSHBG00005018852)	M6PR (ENSSHBG00005018857)	PHC1 (ENSSHBG00005018862)	ENSSHBG00005018883	ENSSHBG00005018921	ENSSHBG00005018927	RIMKLB (ENSSHBG00005018938)	MFAP5 (ENSSHBG00005018942)	AICDA (ENSSHBG00005018948) #17	ENSSHBG00005018953 #18	ENSSHBG00005018954 #18	ENSSHBG00005018956 #20	ENSSHBG00005018959 #20	ENSSHBG00005018963 #21	FOXJ2 (ENSSHBG00005018971) #22	C3AR1 (ENSSHBG00005018972) #23	NECAP1 (ENSSHBG00005018976) #24	ENSSHBG00005018981	ENSSHBG00005018986	ENSSHBG00005018990	ENSSHBG00005019014	FKBP4 (ENSSHBG00005019151)	ENSSHBG00005019152	ITFG2 (ENSSHBG00005019155)	NRIP2 (ENSSHBG00005019159)	FOXM1 (ENSSHBG00005019163)	RHNO1 (ENSSHBG00005019165)	TULP3 (ENSSHBG00005019168)	TEAD4 (ENSSHBG00005019171)	TSPAN9 (ENSSHBG00005019175)
Golden eagle	MODERN SPECIES	8	ENSACCG00020006313	ENSACCG00020016933	M6PR (ENSACCG00020016930)	PHC1 (ENSACCG00020016927)	ENSACCG00020016924	ENSACCG00020016921	ENSACCG00020016919	RIMKLB (ENSACCG00020016916)	MFAP5 (ENSACCG00020016913)	AICDA (ENSACCG00020016910) #17	ENSACCG00020016908 #18	ENSACCG00020016907 #18	ENSACCG00020016905 #20	ENSACCG00020016904 #20	ENSACCG00020016902 #21	FOXJ2 (ENSACCG00020016899) #22	C3AR1 (ENSACCG00020016898) #23	NECAP1 (ENSACCG00020016896) #24	ENSACCG00020016894 #26	ENSACCG00020016892 #26	ENSACCG00020016890	FKBP4 (ENSACCG00020016887)	ITFG2 (ENSACCG00020016885)	ENSACCG00020016883	FOXM1 (ENSACCG00020016881)	RHNO1 (ENSACCG00020016878)	TULP3 (ENSACCG00020016877)	TEAD4 (ENSACCG00020016876)	TSPAN9 (ENSACCG00020016871)	PARP11 (ENSACCG00020016868)	CRACR2A (ENSACCG00020016865)
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000154904.b.n.b.a	ENSGT00940000154904.b.n.b.b	ENSGT00940000156296	ENSGT00960000187102	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b	ENSGT00940000163990.b.a.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000160666 #26	ENSGT00390000017365.b	ENSGT00940000157200	ENSGT00390000005378	ENSGT00940000170442	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857	ENSGT00440000033504.B	ENSGT00940000155867
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596	ENSGT00940000161500	ENSGT00940000157498	ENSGT00940000158779	ENSGT00940000154904.b.n.b.a	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b	ENSGT00940000163990.b.a.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161053 #22	ENSGT00390000009359.a #24	ENSGT00940000157200	ENSGT00390000005378	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857	ENSGT00940000155867	ENSGT01030000234571.b.b.b.a.a	ENSGT00650000093445	ENSGT00940000155083.b	ENSGT00940000155810.a	ENSGT00940000155840.C
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596	ENSGT00940000161500	ENSGT00940000157498	ENSGT00940000158779	ENSGT00940000154904.b.n.b.a	ENSGT00940000154904.b.n.b.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b	ENSGT00940000163990.b.a.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161053 #22	ENSGT00390000009359.a #24	ENSGT00940000157200	ENSGT00390000005378	ENSGT00940000158155	ENSGT00390000003219	ENSGT00940000158804	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000156857	ENSGT00940000155867	ENSGT01030000234571.b.b.b.a.a	ENSGT00650000093445	ENSGT00940000155083.b	ENSGT00940000155810.a	ENSGT00940000155840.C
Turkey	MODERN SPECIES		ENSMGAG00000020617	ENSMGAG00000014203	ENSMGAG00000014217	ENSMGAG00000014218	ENSMGAG00000020482	ENSMGAG00000013976	ENSMGAG00000019166	ENSMGAG00000013959	ENSMGAG00000018087	ENSMGAG00000013947	ENSMGAG00000018135	ENSMGAG00000013938 #21	ENSMGAG00000020102 #20	ENSMGAG00000013944	ENSMGAG00000013942 #17	FOXJ2 (ENSMGAG00000013934) #22	ENSMGAG00000013932 #24	ENSMGAG00000021799	ENSMGAG00000013926	ENSMGAG00000019054	TULP3 (ENSMGAG00000013922)	ENSMGAG00000013923	FOXM1 (ENSMGAG00000013924)	ENSMGAG00000013910	ENSMGAG00000013907	ENSMGAG00000013906	ENSMGAG00000013901	ENSMGAG00000016030	ENSMGAG00000019519	ENSMGAG00000019455	ENSMGAG00000013898
Chicken	MODERN SPECIES		MAN1A2 (ENSGALG00010023053)	ENSGALG00010023042	OVST (ENSGALG00010023020)	ENSGALG00010023003	ENSGALG00010022972	M6PR (ENSGALG00010022885)	PHC1 (ENSGALG00010022842)	ENSGALG00010022821	ENSGALG00010022805	RIMKLB (ENSGALG00010022796)	MFAP5 (ENSGALG00010022764)	AICDA (ENSGALG00010022690) #17	NANOG (ENSGALG00010021471) #20	ENSGALG00010021456 #20	SLC2A14 (ENSGALG00010021387) #21	FOXJ3 (ENSGALG00010021635) #22	NECAP1 (ENSGALG00010024821) #24	FKBP4 (ENSGALG00010024793)	ITFG2 (ENSGALG00010024775)	TULP3 (ENSGALG00010024747)	FOXM1 (ENSGALG00010024729)	TEAD4 (ENSGALG00010024709)	ENSGALG00010024676	ENSGALG00010024668	ZC3HAV1L (ENSGALG00010024645)	PRMT1 (ENSGALG00010024622)	ENSGALG00010024614	ENSGALG00010024606	CD9 (ENSGALG00010024600)	VWF (ENSGALG00010024534)	ENSGALG00010024507
Japanese quail	MODERN SPECIES		ENSCJPG00005016702	ENSCJPG00005016701	ENSCJPG00005016698	ENSCJPG00005016692	ENSCJPG00005016691	M6PR (ENSCJPG00005016690)	PHC1 (ENSCJPG00005016689)	ENSCJPG00005016687	ENSCJPG00005016686	RIMKLB (ENSCJPG00005016685)	MFAP5 (ENSCJPG00005016684)	AICDA (ENSCJPG00005016683) #17	ENSCJPG00005016682 #20	ENSCJPG00005016681	ENSCJPG00005016680 #21	FOXJ2 (ENSCJPG00005016679) #22	NECAP1 (ENSCJPG00005016645) #24	FKBP4 (ENSCJPG00005016644)	ITFG2 (ENSCJPG00005016633)	FOXM1 (ENSCJPG00005016622)	RHNO1 (ENSCJPG00005016620)	TULP3 (ENSCJPG00005016619)	TEAD4 (ENSCJPG00005016618)	TSPAN9 (ENSCJPG00005016617)	PARP11 (ENSCJPG00005016616)	PRMT8 (ENSCJPG00005016615)	ENSCJPG00005016610	CD9 (ENSCJPG00005016609)	VWF (ENSCJPG00005016468)	ANO2 (ENSCJPG00005016266)	NTF3 (ENSCJPG00005016264)
Anatidae	ANCESTRAL SPECIES	8	ENSGT00940000154904.b.n.b.a	ENSGT00940000154904.b.n.b.b	ENSGT00940000156296	ENSGT00960000187102	ENSGT00390000002109	ENSGT00940000156612	ENSGT00960000190469	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000160666 #26
Pink-footed goose	MODERN SPECIES	295	ENSABRG00000013789	KLRG1 (ENSABRG00000013778)	M6PR (ENSABRG00000013771)	PHC1 (ENSABRG00000013747)	ENSABRG00000013717	ENSABRG00000013715	ENSABRG00000013689	A2ML1 (ENSABRG00000013659)	RIMKLB (ENSABRG00000013591)	MFAP5 (ENSABRG00000013580)	AICDA (ENSABRG00000013576) #17	ENSABRG00000013575 #18	ENSABRG00000013573 #20	ENSABRG00000013568 #20	ENSABRG00000013560 #21	FOXJ2 (ENSABRG00000013556) #22	C3AR1 (ENSABRG00000013555) #23	NECAP1 (ENSABRG00000013552) #24	ENSABRG00000013546 #26
Duck	MODERN SPECIES		ENSAPLG00000015437	LPAR5 (ENSAPLG00000001294)	CHD4 (ENSAPLG00000014146)	NOP2 (ENSAPLG00000020826)	IFFO1 (ENSAPLG00000026823)	ENSAPLG00000027352	NCAPD2 (ENSAPLG00000013121)	MRPL51 (ENSAPLG00000025855)	VAMP1 (ENSAPLG00000013048)	SCNN1A (ENSAPLG00000012377)	TAPBPL (ENSAPLG00000013511)	FBXO40 (ENSAPLG00000005334)	KPNA1 (ENSAPLG00000004886)	FAM162A (ENSAPLG00000004872)	ENSAPLG00000020387	FOXJ2 (ENSAPLG00000013506) #22	C3AR1 (ENSAPLG00000001977) #23	NECAP1 (ENSAPLG00000013392) #24	ENSAPLG00000013634 #21	ENSAPLG00000013879 #20	ENSAPLG00000019724 #20	APOBEC1 (ENSAPLG00000028436) #18	AICDA (ENSAPLG00000013954) #17	ENSAPLG00000027076	MFAP5 (ENSAPLG00000014005)	RIMKLB (ENSAPLG00000014066)	A2ML1 (ENSAPLG00000025632)	ENSAPLG00000019388	ENSAPLG00000014443	ENSAPLG00000023652	ENSAPLG00000022197
African ostrich	MODERN SPECIES	864													ENSSCUG00000014551 #20	ENSSCUG00000014553 #20	ENSSCUG00000014556 #21	FOXJ2 (ENSSCUG00000014561) #22	C3AR1 (ENSSCUG00000014563) #23	NECAP1 (ENSSCUG00000014565) #24	CLEC4D (ENSSCUG00000014567) #25	ENSSCUG00000014570	ENSSCUG00000014572	FKBP4 (ENSSCUG00000014574)	ITFG2 (ENSSCUG00000014576)	NRIP2 (ENSSCUG00000014579)	FOXM1 (ENSSCUG00000014585)	RHNO1 (ENSSCUG00000014586)	TULP3 (ENSSCUG00000014589)	TEAD4 (ENSSCUG00000014592)
Australian saltwater crocodile	MODERN SPECIES	49	KLRG1 (ENSCPRG00005012459)	M6PR (ENSCPRG00005012463)	PHC1 (ENSCPRG00005012465)	ENSCPRG00005012472 #18	ENSCPRG00005012483	ENSCPRG00005012488	ENSCPRG00005012499	ENSCPRG00005012539	RIMKLB (ENSCPRG00005012563)	MFAP5 (ENSCPRG00005012595)	AICDA (ENSCPRG00005012603) #17	ENSCPRG00005012615	ENSCPRG00005012621 #20	ENSCPRG00005012626 #20	ENSCPRG00005012651 #21	FOXJ2 (ENSCPRG00005012653) #22	C3AR1 (ENSCPRG00005012661) #23	NECAP1 (ENSCPRG00005012663) #24	CLEC4D (ENSCPRG00005012670) #25	ENSCPRG00005012671	ENSCPRG00005012673	ENSCPRG00005012675	ENSCPRG00005012682	ENSCPRG00005012877	FKBP4 (ENSCPRG00005012915)	ITFG2 (ENSCPRG00005013105)	ENSCPRG00005013135	TEX52 (ENSCPRG00005013142)	FOXM1 (ENSCPRG00005013151)	RHNO1 (ENSCPRG00005013184)	TULP3 (ENSCPRG00005013197)
Cryptodira	ANCESTRAL SPECIES	10	ENSGT00940000154904.b.m.b	ENSGT00940000154904.b.n.a.b	ENSGT00940000156296.j.a	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000154904.b.n.a.a	ENSGT00940000163990.b.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.f.b #18	ENSGT00940000161190.f.a.b #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT01020000230338	ENSGT00390000017365.b.l	ENSGT00940000157200	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00390000006066	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000161249	ENSGT00940000155867
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000154904.b.n.a.b.c	ENSGT00940000163990.b.b	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.b #18	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.a.b #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000160313.cb #21	ENSGT00940000167279	ENSGT00940000160313.bb #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT01020000230338	ENSGT00390000017365.b.l	ENSGT00940000157200	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00390000006066	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000161249	ENSGT00940000155867
Testudinidae	ANCESTRAL SPECIES	52	ENSGT00940000154904.b.n.a.b.c	ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.b #18	ENSGT00940000161190.e.a #18	ENSGT00940000161190.f.b #18	ENSGT00940000161190.f.a.a.a #18	ENSGT00940000161190.f.a.a.b.a #18	ENSGT00940000161190.f.a.b #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb #20	ENSGT00940000167279	ENSGT00940000160313.bb #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000160666.m.b #26	ENSGT00390000017365.b.l	ENSGT00940000157200	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000170442	ENSGT00390000006066	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000161249
Abingdon island giant tortoise	MODERN SPECIES	634	RIMKLB (ENSCABG00000012690)	MFAP5 (ENSCABG00000012686)	AICDA (ENSCABG00000012670) #17	ENSCABG00000012667 #18	ENSCABG00000012665 #18	ENSCABG00000012648 #18	ENSCABG00000012645 #18	ENSCABG00000012644 #18	ENSCABG00000012641 #18	ENSCABG00000012606 #18	ENSCABG00000012595 #20	ENSCABG00000012594 #20	ENSCABG00000012593	ENSCABG00000012590 #21	C3AR1 (ENSCABG00000012589) #23	FOXJ2 (ENSCABG00000012584) #22	NECAP1 (ENSCABG00000012582) #24	ENSCABG00000012579	CLEC4A (ENSCABG00000012578)	ENSCABG00000012574	ENSCABG00000012572	ENSCABG00000012568	ENSCABG00000012303	FKBP4 (ENSCABG00000012293)	ITFG2 (ENSCABG00000012292)	NRIP2 (ENSCABG00000012291)
Goode s thornscrub tortoise	MODERN SPECIES		KLRG1 (ENSGEVG00005000933)	M6PR (ENSGEVG00005000952)	PHC1 (ENSGEVG00005000993)	ENSGEVG00005001055	RIMKLB (ENSGEVG00005001105)	MFAP5 (ENSGEVG00005001118)	AICDA (ENSGEVG00005001140) #17	ENSGEVG00005001167 #18	ENSGEVG00005001204 #18	ENSGEVG00005001225 #18	ENSGEVG00005001280 #18	ENSGEVG00005001357 #20	ENSGEVG00005001370 #20	ENSGEVG00005001387	ENSGEVG00005001395 #21	FOXJ2 (ENSGEVG00005001434) #22	ENSGEVG00005001473 #23	ENSGEVG00005001483 #23	NECAP1 (ENSGEVG00005001494) #24	ENSGEVG00005001509 #26	ENSGEVG00005001525 #26	ENSGEVG00005001535	ENSGEVG00005001549 #26	ENSGEVG00005001569	ENSGEVG00005001594	ENSGEVG00005001674	FKBP4 (ENSGEVG00005001890)	ITFG2 (ENSGEVG00005001936)	ENSGEVG00005001958	TEX52 (ENSGEVG00005001970)	FOXM1 (ENSGEVG00005002010)
Emydidae	ANCESTRAL SPECIES	5					ENSGT00940000163018	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000161190.e.b #18	ENSGT00940000161190.e.a #18	ENSGT00670000098076.fb #20	ENSGT00670000098076.gb.b #20	ENSGT00940000160313.cb #21	ENSGT00940000167279	ENSGT00940000160313.bb #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000160666.m.b #26	ENSGT00940000158835	ENSGT00940000162400 #25	ENSGT00390000017365.b.l	ENSGT00940000157200	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00390000006066	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225
painted turtle	MODERN SPECIES	849										ENSCPBG00000010058 #20	ENSCPBG00000010055 #20	ENSCPBG00000010002 #21	ENSCPBG00000009993 #21	ENSCPBG00000009987 #23	ENSCPBG00000009983 #23	FOXJ2 (ENSCPBG00000009978) #22	NECAP1 (ENSCPBG00000009975) #24	ENSCPBG00000009972 #26	ENSCPBG00000009968	ENSCPBG00000009967	CLEC4D (ENSCPBG00000009961) #25	ENSCPBG00000009959	ENSCPBG00000009957	FKBP4 (ENSCPBG00000009954)	ITFG2 (ENSCPBG00000009950)	NRIP2 (ENSCPBG00000009947)	TEX52 (ENSCPBG00000009945)	FOXM1 (ENSCPBG00000009810)	RHNO1 (ENSCPBG00000009795)	TULP3 (ENSCPBG00000009789)	TEAD4 (ENSCPBG00000009777)
Three-toed box turtle	MODERN SPECIES	49					ENSTMTG00000016317	RIMKLB (ENSTMTG00000016297)	MFAP5 (ENSTMTG00000016285)	AICDA (ENSTMTG00000016270) #17	ENSTMTG00000016261 #18	ENSTMTG00000015890 #18	ENSTMTG00000015825 #20	ENSTMTG00000015805 #20	ENSTMTG00000015792	ENSTMTG00000015774	ENSTMTG00000015754 #21	FOXJ2 (ENSTMTG00000015730) #22	NECAP1 (ENSTMTG00000015709) #24	ENSTMTG00000015693 #26	ENSTMTG00000015673	ENSTMTG00000015655 #26	ENSTMTG00000015650	ENSTMTG00000015618	ENSTMTG00000015605	TEX52 (ENSTMTG00000015590)	FOXM1 (ENSTMTG00000015429)	TULP3 (ENSTMTG00000015399)	TEAD4 (ENSTMTG00000015384)	TSPAN9 (ENSTMTG00000015368)	TSPAN11 (ENSTMTG00000015304)	PRMT8 (ENSTMTG00000014976)	CRACR2A (ENSTMTG00000014820)
Chinese turtle	MODERN SPECIES	837			ENSPSIG00000017459	ENSPSIG00000017306	A2ML1 (ENSPSIG00000014170)	RIMKLB (ENSPSIG00000014023)	MFAP5 (ENSPSIG00000013799)	AICDA (ENSPSIG00000013283) #17	ENSPSIG00000012791 #18	ENSPSIG00000012769	ENSPSIG00000012568 #18	ENSPSIG00000012334 #20	ENSPSIG00000012067 #20	ENSPSIG00000011013 #21	ENSPSIG00000000059	FOXJ2 (ENSPSIG00000010988) #22	C3AR1 (ENSPSIG00000000058) #23	NECAP1 (ENSPSIG00000010790) #24
Lepidosauria	ANCESTRAL SPECIES	194															ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000160666 #26
tuatara	MODERN SPECIES	1636															ENSSPUG00000002003 #21	FOXJ2 (ENSSPUG00000001992) #22	NECAP1 (ENSSPUG00000001986) #24	ENSSPUG00000001977 #26
Episquamata	ANCESTRAL SPECIES	3	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159778	ENSGT00940000159741	ENSGT00390000015386	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.D	ENSGT00950000182850.a.b.a.a	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT01020000230338	ENSGT00940000161623	ENSGT00390000014853	ENSGT00390000000483.b	ENSGT00940000158750	ENSGT00390000003477	ENSGT00390000012901	ENSGT00940000159350	ENSGT00940000157037.a	ENSGT00940000159192	ENSGT00390000009416	ENSGT00940000160595.b	ENSGT00940000160449
Laterata	ANCESTRAL SPECIES	21	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159778	ENSGT00940000159741	ENSGT00390000015386	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.D	ENSGT00950000182850.a.b.a.a	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT01020000230338.h	ENSGT00940000161623	ENSGT00390000014853	ENSGT00390000000483.b	ENSGT00940000158750	ENSGT00390000003477	ENSGT00390000012901	ENSGT00940000159350	ENSGT00940000157037.a	ENSGT00940000159192	ENSGT00390000009416	ENSGT00940000160595.b	ENSGT00940000160449
Common wall lizard	MODERN SPECIES	17	FBXO22 (ENSPMRG00000014042)	UBE2Q2 (ENSPMRG00000014073)	ENSPMRG00000014131	CHRNB4 (ENSPMRG00000014135)	CHRNA3 (ENSPMRG00000014141)	ENSPMRG00000014145	CHRNA5 (ENSPMRG00000014151)	ENSPMRG00000014155	PSMA4 (ENSPMRG00000014165)	HYKK (ENSPMRG00000014179)	ENSPMRG00000014185	ENSPMRG00000014192	ABLIM2 (ENSPMRG00000014210)	ENSPMRG00000014231 #21	ENSPMRG00000014247	FOXJ2 (ENSPMRG00000014253) #22	C3AR1 (ENSPMRG00000014262) #23	NECAP1 (ENSPMRG00000014274) #24	ENSPMRG00000015800	ENSPMRG00000015806	ENSPMRG00000015813	ENSPMRG00000015820	ENSPMRG00000015828	STX18 (ENSPMRG00000015836)	NSG1 (ENSPMRG00000015856)	ZBTB49 (ENSPMRG00000015875)	LYAR (ENSPMRG00000015894)	TMEM128 (ENSPMRG00000015902)	OTOP1 (ENSPMRG00000015904)	DRD5 (ENSPMRG00000015914)	SLC2A9 (ENSPMRG00000015928)
Argentine black and white tegu	MODERN SPECIES	1	HTT (ENSSMRG00000023405)	MSANTD1 (ENSSMRG00000023407)	HGFAC (ENSSMRG00000023408)	RGS12 (ENSSMRG00000023409)	DOK7 (ENSSMRG00000023411)	ADRA2C (ENSSMRG00000023413)	HMX1 (ENSSMRG00000023414)	ENSSMRG00000023415	CPZ (ENSSMRG00000023416)	TRMT44 (ENSSMRG00000023417)	ACOX3 (ENSSMRG00000023418)	HTRA3 (ENSSMRG00000023419)	ENSSMRG00000023420	ABLIM2 (ENSSMRG00000023421)	ENSSMRG00000023422 #21	FOXJ2 (ENSSMRG00000023423) #22	C3AR1 (ENSSMRG00000023424) #23	NECAP1 (ENSSMRG00000023425) #24	ENSSMRG00000023426	MSX1 (ENSSMRG00000023427)	STX18 (ENSSMRG00000023429)	NSG1 (ENSSMRG00000023430)	ZBTB49 (ENSSMRG00000023431)	LYAR (ENSSMRG00000023432)	TMEM128 (ENSSMRG00000023433)	OTOP1 (ENSSMRG00000023434)	DRD5 (ENSSMRG00000023435)	SLC2A9 (ENSSMRG00000023436)	ENSSMRG00000023437	WDR1 (ENSSMRG00000023439)	ZNF518B (ENSSMRG00000023440)
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00830000128422	ENSGT00390000017459	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159778	ENSGT00940000159741	ENSGT00390000015386	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.D	ENSGT00950000182850.a.b.a.a	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000161623	ENSGT00390000014853	ENSGT00390000000483.b	ENSGT00940000158750	ENSGT00390000003477	ENSGT00390000012901	ENSGT00940000159350	ENSGT00940000157037.a	ENSGT00940000159192	ENSGT00390000009416	ENSGT00940000161833	ENSGT00940000161843	ENSGT00940000156198.c.a
Elapidae	ANCESTRAL SPECIES	65											ENSGT00390000000645	ENSGT00940000159423	ENSGT00530000063812.D	ENSGT00950000182850.a.b.a.a	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000161623	ENSGT00390000014853	ENSGT00390000000483.b	ENSGT00940000158750	ENSGT00390000003477
Elapidae_a	ANCESTRAL SPECIES	148											ENSGT00390000000645	ENSGT00940000159423	ENSGT00530000063812.D	ENSGT00950000182850.a.b.a.a	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000161623	ENSGT00390000014853	ENSGT00390000000483.b	ENSGT00940000158750	ENSGT00390000003477
Acanthophiinae	ANCESTRAL SPECIES	135											ENSGT00390000000645	ENSGT00940000159423	ENSGT00530000063812.D	ENSGT00950000182850.a.b.a.a	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000161623	ENSGT00390000014853	ENSGT00390000000483.b	ENSGT00940000158750.w	ENSGT00390000003477
Mainland tiger snake	MODERN SPECIES	594											TRMT44 (ENSNSUG00000002116)	ACOX3 (ENSNSUG00000002109)	ENSNSUG00000001965	ABLIM2 (ENSNSUG00000001960)	ENSNSUG00000001590 #21	FOXJ2 (ENSNSUG00000001570) #22	C3AR1 (ENSNSUG00000001569) #23	NECAP1 (ENSNSUG00000001565) #24
Eastern brown snake	MODERN SPECIES	12	WDR1 (ENSPTXG00000005626)	RAB28 (ENSPTXG00000005627)	NKX3-2 (ENSPTXG00000005628)	ENSPTXG00000005629	ENSPTXG00000005630	C1QTNF7 (ENSPTXG00000005639)	ENSPTXG00000005640	CC2D2A (ENSPTXG00000005643)	FBXL5 (ENSPTXG00000005652)	CD38 (ENSPTXG00000005654)	TRMT44 (ENSPTXG00000005656)	ACOX3 (ENSPTXG00000005751)	ENSPTXG00000005752	ABLIM2 (ENSPTXG00000005753)	ENSPTXG00000005754	FOXJ2 (ENSPTXG00000005755) #22	C3AR1 (ENSPTXG00000005756) #23	NECAP1 (ENSPTXG00000005757) #24	MSX1 (ENSPTXG00000005758)	STX18 (ENSPTXG00000005759)	NSG1 (ENSPTXG00000005760)	ENSPTXG00000005761	ENSPTXG00000005762	LYAR (ENSPTXG00000005763)
Blue-lipped sea krait	MODERN SPECIES	8837																FOXJ2 (ENSLLTG00000005205) #22	C3AR1 (ENSLLTG00000005196) #23
Indian cobra	MODERN SPECIES	3	TMEM144 (ENSNNAG00000005011)	GASK1B (ENSNNAG00000004976)	GRIA2 (ENSNNAG00000004633)	GLRB (ENSNNAG00000004584)	PDGFC (ENSNNAG00000004572)	FGFBP1 (ENSNNAG00000004557)	ENSNNAG00000004437	ENSNNAG00000004399	TAPT1 (ENSNNAG00000004293)	TRMT44 (ENSNNAG00000004250)	ACOX3 (ENSNNAG00000003863)	ENSNNAG00000003796	ENSNNAG00000003770	ABLIM2 (ENSNNAG00000003730)	ENSNNAG00000003713 #21	FOXJ2 (ENSNNAG00000003653) #22	C3AR1 (ENSNNAG00000003632) #23	NECAP1 (ENSNNAG00000003610) #24	MSX1 (ENSNNAG00000003599)	STX18 (ENSNNAG00000003576)	NSG1 (ENSNNAG00000003545)	ENSNNAG00000003527	LYAR (ENSNNAG00000003516)	ENSNNAG00000003498	NKX3-2 (ENSNNAG00000003486)	ENSNNAG00000003436	ENSNNAG00000003425	ENSNNAG00000003420	C1QTNF7 (ENSNNAG00000003412)	CC2D2A (ENSNNAG00000003243)	FBXL5 (ENSNNAG00000003139)
Lizard	DUPLICATION
Lizard	MODERN SPECIES	1174																ENSACAG00000000249 #22	ENSACAG00000000261	ENSACAG00000000262	ENSACAG00000040626	SERINC2 (ENSACAG00000000268)	ENSACAG00000036171	ZCCHC17 (ENSACAG00000000389)	SNRNP40 (ENSACAG00000000469)	PUM1 (ENSACAG00000000682)	SDC3 (ENSACAG00000000940)	MATN1 (ENSACAG00000000957)	PTPRU (ENSACAG00000001027)	MECR (ENSACAG00000001529)	ENSACAG00000035207	ENSACAG00000042459
Lizard	MODERN SPECIES	850			MSANTD1 (ENSACAG00000044093)	ENSACAG00000005806	ENSACAG00000005758	ENSACAG00000005755	HMX1 (ENSACAG00000027749)	CPZ (ENSACAG00000012204)	TRMT44 (ENSACAG00000012152)	ACOX3 (ENSACAG00000012039)	HTRA3 (ENSACAG00000011912)	ENSACAG00000011803	ABLIM2 (ENSACAG00000011592)	ENSACAG00000011337 #21	ENSACAG00000040561	ENSACAG00000011293 #22	C3AR1 (ENSACAG00000011272) #23	ENSACAG00000011134 #24	ENSACAG00000042955	ENSACAG00000035199	ENSACAG00000011057	MSX1 (ENSACAG00000042172)	STX18 (ENSACAG00000011038)	NSG1 (ENSACAG00000035567)	ZBTB49 (ENSACAG00000010957)	ENSACAG00000042086	LYAR (ENSACAG00000028262)	ENSACAG00000041705	TMEM128 (ENSACAG00000010933)	OTOP1 (ENSACAG00000010902)	ENSACAG00000038617
Anura	ANCESTRAL SPECIES	278												ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731 #17	ENSGT00940000160313 #21	ENSGT00940000161053 #22	ENSGT00940000162689.a.a	ENSGT01100000263564.b #23	ENSGT00390000009359.a #24	ENSGT00940000156605 #30
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000026287	ENSLLEG00000026710	ENSLLEG00000026732	ENSLLEG00000026792	ENSLLEG00000027409	ENSLLEG00000027638	ENSLLEG00000027828	ENSLLEG00000027862	ENSLLEG00000027881	ENSLLEG00000027925	RIMKLB (ENSLLEG00000027957)	ENSLLEG00000028086	ENSLLEG00000028095	AICDA (ENSLLEG00000028125) #17	ENSLLEG00000028138	FOXJ2 (ENSLLEG00000028168) #22	ENSLLEG00000028207	C3AR1 (ENSLLEG00000028274) #23	NECAP1 (ENSLLEG00000028313) #24	PEX5 (ENSLLEG00000028432) #30	TECTB (ENSLLEG00000028614)	ENSLLEG00000028656	GPAM (ENSLLEG00000028735)	ENSLLEG00000028884	ENSLLEG00000028894	ENSLLEG00000028908	ENSLLEG00000028938	ENSLLEG00000028947	ADRA2A (ENSLLEG00000028955)	SHOC2 (ENSLLEG00000028971)	BBIP1 (ENSLLEG00000029031)
Frog	MODERN SPECIES	7	ENSXETG00000048212	lrrc23 (ENSXETG00000023923)	atn1 (ENSXETG00000023922)	ptpn6 (ENSXETG00000023918)	phb2 (ENSXETG00000023919)	emg1 (ENSXETG00000023917) #37	clstn3 (ENSXETG00000023916) #31	c1s (ENSXETG00000023912) #35	c1r (ENSXETG00000033339) #35	ENSXETG00000047157	necap1 (ENSXETG00000039955) #24	ENSXETG00000046983	pex5 (ENSXETG00000023910) #30	c3ar1 (ENSXETG00000023907) #23	c12orf57 (ENSXETG00000036471)	foxj2 (ENSXETG00000027639) #22	ENSXETG00000040851	ENSXETG00000047347	ENSXETG00000046904	slc2a3 (ENSXETG00000023902) #21	aicda (ENSXETG00000023905) #17	mfap5 (ENSXETG00000048385)	rimklb (ENSXETG00000030755)	ENSXETG00000037927	ENSXETG00000041971	ovos2 (ENSXETG00000009402)	ENSXETG00000045634	ENSXETG00000043913	ENSXETG00000047661	ENSXETG00000042374	ENSXETG00000047030