Glires	ANCESTRAL SPECIES	22	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.b ##13	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Rodentia	ANCESTRAL SPECIES	22	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.b ##13	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT01100000263536.C	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Sciuridae	ANCESTRAL SPECIES	46	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35
Eurasian red squirrel	MODERN SPECIES	13	STK24 (ENSSVLG00005001987) #7	FARP1 (ENSSVLG00005001922) #8	ENSSVLG00005001850 #9	IPO5 (ENSSVLG00005001723) #10	ENSSVLG00005001651 #11	RAP2A (ENSSVLG00005001635) #12	MBNL2 (ENSSVLG00005001578) #13	OXGR1 (ENSSVLG00005001543) #14	HS6ST3 (ENSSVLG00005001525) #15	UGGT2 (ENSSVLG00005001478) #16	ENSSVLG00005001443 #17	DNAJC3 (ENSSVLG00005001415) #18	DZIP1 (ENSSVLG00005001372) #19	CLDN10 (ENSSVLG00005001317) #20	ABCC4 (ENSSVLG00005001154) #21	SOX21 (ENSSVLG00005001005) #22	GPR180 (ENSSVLG00005000983) #23	ENSSVLG00005000946 #24	DCT (ENSSVLG00005000890) #25	GPC6 (ENSSVLG00005000843) #26	ENSSVLG00005000817 #27	GPC5 (ENSSVLG00005000772) #28	ENSSVLG00005000662 #29	ENSSVLG00005000636 #30	ENSSVLG00005000588 #31	ENSSVLG00005000573 #32	ENSSVLG00005000550 #33	ENSSVLG00005000527 #34	SLITRK5 (ENSSVLG00005000517) #35	ENSSVLG00005000440 #36	ENSSVLG00005000420 #37
Marmotini	ANCESTRAL SPECIES	29	ENSGT01100000263536.C	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b.g #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a	ENSGT00940000153284.a.g.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381
Marmotini_b	ANCESTRAL SPECIES	39	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b.g #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A
Arctic ground squirrel	MODERN SPECIES	7	DOCK9 (ENSUPAG00010009595)	SLC15A1 (ENSUPAG00010009559)	STK24 (ENSUPAG00010009528) #7	FARP1 (ENSUPAG00010009445) #8	IPO5 (ENSUPAG00010009410) #10	RAP2A (ENSUPAG00010009405) #12	MBNL2 (ENSUPAG00010009324) #13	OXGR1 (ENSUPAG00010009319) #14	HS6ST3 (ENSUPAG00010009313) #15	UGGT2 (ENSUPAG00010009223) #16	ENSUPAG00010009192	DNAJC3 (ENSUPAG00010009173) #18	DZIP1 (ENSUPAG00010008347) #19	CLDN10 (ENSUPAG00010008292) #20	ABCC4 (ENSUPAG00010008172) #21	SOX21 (ENSUPAG00010008161) #22	GPR180 (ENSUPAG00010008151) #23	TGDS (ENSUPAG00010008093) #24	DCT (ENSUPAG00010008077) #25	GPC6 (ENSUPAG00010007999) #26	GPC5 (ENSUPAG00010007957) #28
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT01100000263536.C	ENSGT00940000155972.B.e	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b.t #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Naked mole-rat female	MODERN SPECIES	2	MBNL2 (ENSHGLG00000000575) #13	ENSHGLG00000035007	OXGR1 (ENSHGLG00000000211) #14	ENSHGLG00000034517	ENSHGLG00000047293	HS6ST3 (ENSHGLG00000003455) #15	UGGT2 (ENSHGLG00000001100) #16	DNAJC3 (ENSHGLG00000003951) #18	DZIP1 (ENSHGLG00000002976) #19	CLDN10 (ENSHGLG00000001257) #20	ENSHGLG00000042681	ENSHGLG00000011718 #21	ENSHGLG00000048406	ENSHGLG00000008312	ENSHGLG00000006878	ENSHGLG00000034930 #22	GPR180 (ENSHGLG00000002152) #23	TGDS (ENSHGLG00000000360) #24	DCT (ENSHGLG00000001562) #25	ENSHGLG00000040422	ENSHGLG00000039074	ENSHGLG00000035827	GPC6 (ENSHGLG00000001128) #26	GPC5 (ENSHGLG00000000656) #28	ENSHGLG00000046381	ENSHGLG00000001081	ENSHGLG00000001464	ENSHGLG00000020258	ENSHGLG00000039195	ENSHGLG00000037714	SLITRK5 (ENSHGLG00000048548) #35
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT01100000263536.C	ENSGT00940000155972.B.e	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b.t #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	44	ENSGT01100000263536.C	ENSGT00940000155972.B.e	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594.c #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b.t #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Long-tailed chinchilla	MODERN SPECIES	111	GPR18 (ENSCLAG00000004313)	DOCK9 (ENSCLAG00000008449)	SLC15A1 (ENSCLAG00000003310)	STK24 (ENSCLAG00000003844) #7	FARP1 (ENSCLAG00000002173) #8	IPO5 (ENSCLAG00000002384) #10	RAP2A (ENSCLAG00000003366) #12	MBNL2 (ENSCLAG00000003658) #13	OXGR1 (ENSCLAG00000005936) #14	HS6ST3 (ENSCLAG00000006006) #15	UGGT2 (ENSCLAG00000006413) #16	DNAJC3 (ENSCLAG00000002448) #18	DZIP1 (ENSCLAG00000002611) #19	CLDN10 (ENSCLAG00000002269) #20	ABCC4 (ENSCLAG00000002923) #21	SOX21 (ENSCLAG00000002844) #22	GPR180 (ENSCLAG00000002976) #23	TGDS (ENSCLAG00000003039) #24	DCT (ENSCLAG00000003506) #25	GPC6 (ENSCLAG00000004267) #26	GPC5 (ENSCLAG00000005754) #28	SLITRK5 (ENSCLAG00000006000) #35	SLITRK6 (ENSCLAG00000006754)	SLITRK1 (ENSCLAG00000017541)	SPRY2 (ENSCLAG00000001939)	NDFIP2 (ENSCLAG00000002158)	RBM26 (ENSCLAG00000002467)	OBI1 (ENSCLAG00000003803)	ENSCLAG00000004015	EDNRB (ENSCLAG00000003613)	SLAIN1 (ENSCLAG00000004290)
Degu	MODERN SPECIES	54											ENSODEG00000006083 #16	DNAJC3 (ENSODEG00000006169) #18	DZIP1 (ENSODEG00000004942) #19	ENSODEG00000005054 #20	ABCC4 (ENSODEG00000005168) #21	SOX21 (ENSODEG00000019452) #22	GPR180 (ENSODEG00000007113) #23	TGDS (ENSODEG00000005158) #24	DCT (ENSODEG00000005228) #25	GPC6 (ENSODEG00000005614) #26	ENSODEG00000004646	ENSODEG00000004771 #28	ENSODEG00000004500	SLITRK5 (ENSODEG00000019086) #35	ENSODEG00000019180	ENSODEG00000019443	SLITRK6 (ENSODEG00000007665)	ENSODEG00000007865	ENSODEG00000019492	SLITRK1 (ENSODEG00000019121)	ENSODEG00000019094
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.b ##13	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Myomorpha	ANCESTRAL SPECIES	32	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Muroidea	ANCESTRAL SPECIES	25	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862.e #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000154461.`c	ENSGT00940000154294.k.a	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862.e #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Chinese hamster chok1gshd	MODERN SPECIES	3	Stk24 (ENSCGRG00001017876) #7	Farp1 (ENSCGRG00001014318) #8	ENSCGRG00001005522 #10	ENSCGRG00001010599	Rap2a (ENSCGRG00001009677) #12	ENSCGRG00001010070	Mbnl2 (ENSCGRG00001015686) #13	Oxgr1 (ENSCGRG00001004650) #14	Hs6st3 (ENSCGRG00001019622) #15	Uggt2 (ENSCGRG00001016376) #16	Dnajc3 (ENSCGRG00001016665) #18	Dzip1 (ENSCGRG00001024642) #19	Cldn10 (ENSCGRG00001018980) #20	Abcc4 (ENSCGRG00001005625) #21	ENSCGRG00001022896	Sox21 (ENSCGRG00001001959) #22	Gpr180 (ENSCGRG00001013522) #23	Tgds (ENSCGRG00001000527) #24	Dct (ENSCGRG00001019389) #25	Gpc6 (ENSCGRG00001014308) #26	ENSCGRG00001022279	Gpc5 (ENSCGRG00001012658) #28	ENSCGRG00001014085	ENSCGRG00001000596	Slitrk5 (ENSCGRG00001006071) #35	Slitrk6 (ENSCGRG00001002482)	Slitrk1 (ENSCGRG00001002013)	Trim52 (ENSCGRG00001002565)	ENSCGRG00001007508	Spry2 (ENSCGRG00001006571)	Ndfip2 (ENSCGRG00001023296)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862.e #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000154461.`c	ENSGT00940000154294.k.a	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Prairie vole	MODERN SPECIES	4	ENSMOCG00000011275	Dock9 (ENSMOCG00000012637)	Slc15a1 (ENSMOCG00000012747)	Stk24 (ENSMOCG00000019469) #7	Farp1 (ENSMOCG00000017345) #8	ENSMOCG00000019165 #10	Rap2a (ENSMOCG00000013779) #12	Mbnl2 (ENSMOCG00000000755) #13	Oxgr1 (ENSMOCG00000017757) #14	Hs6st3 (ENSMOCG00000017153) #15	Uggt2 (ENSMOCG00000019627) #16	Dnajc3 (ENSMOCG00000004547) #18	Dzip1 (ENSMOCG00000009668) #19	Cldn10 (ENSMOCG00000001906) #20	Abcc4 (ENSMOCG00000001960) #21	Sox21 (ENSMOCG00000011400) #22	Gpr180 (ENSMOCG00000017995) #23	Tgds (ENSMOCG00000021583) #24	Dct (ENSMOCG00000019333) #25	Gpc6 (ENSMOCG00000022265) #26	Gpc5 (ENSMOCG00000011002) #28	ENSMOCG00000003746	Slitrk5 (ENSMOCG00000019120) #35	ENSMOCG00000006881	ENSMOCG00000017964	Slitrk6 (ENSMOCG00000013923)	ENSMOCG00000005944	ENSMOCG00000007797	ENSMOCG00000017655	Slitrk1 (ENSMOCG00000008123)	ENSMOCG00000014539
Murinae	ANCESTRAL SPECIES	16	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Mus	ANCESTRAL SPECIES	8	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00900000143753	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Mus_A	ANCESTRAL SPECIES	12	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00900000143753	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Mus_B	ANCESTRAL SPECIES	11	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Mus_C	ANCESTRAL SPECIES	20	ENSGT00950000182999.b.b	ENSGT00940000155972.B	ENSGT00940000155995	ENSGT00940000153476.b #7	ENSGT00940000155318 #8	ENSGT00940000155502 #10	ENSGT00940000160594 #12	ENSGT00950000182897.B.a.b.b #13	ENSGT01030000234621.F #14	ENSGT00950000183071.a.a.a #15	ENSGT00390000004600.b.b #16	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a #28	ENSGT00940000158453.a #35	ENSGT00940000160718	ENSGT00940000159810	ENSGT00390000000475.sb.bc.a	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Steppe mouse	MODERN SPECIES	3368	Slc15a1 (ENSMSIG00000026313)	Stk24 (ENSMSIG00000026291) #7	Farp1 (ENSMSIG00000026263) #8	Ipo5 (ENSMSIG00000026229) #10	ENSMSIG00000026224	Rap2a (ENSMSIG00000026221) #12	Mbnl2 (ENSMSIG00000025784) #13	Oxgr1 (ENSMSIG00000025777) #14	ENSMSIG00000025775 #15	Uggt2 (ENSMSIG00000025703) #16	Dnajc3 (ENSMSIG00000025655) #18	Dzip1 (ENSMSIG00000025585) #19	Cldn10 (ENSMSIG00000025545) #20	Abcc4 (ENSMSIG00000025421) #21	ENSMSIG00000025402	Sox21 (ENSMSIG00000025390) #22	Gpr180 (ENSMSIG00000025376) #23	Tgds (ENSMSIG00000025345) #24	Dct (ENSMSIG00000025337) #25	Gpc6 (ENSMSIG00000025289) #26	ENSMSIG00000025276	Gpc5 (ENSMSIG00000025251) #28
spretus	MODERN SPECIES	5	Ubac2 (MGP_SPRETEiJ_G0020505)	Dock9 (MGP_SPRETEiJ_G0020504)	Slc15a1 (MGP_SPRETEiJ_G0020503)	Stk24 (MGP_SPRETEiJ_G0020502) #7	Farp1 (MGP_SPRETEiJ_G0020501) #8	Ipo5 (MGP_SPRETEiJ_G0020500) #10	Rap2a (MGP_SPRETEiJ_G0020499) #12	Mbnl2 (MGP_SPRETEiJ_G0020498) #13	Oxgr1 (MGP_SPRETEiJ_G0020497) #14	Hs6st3 (MGP_SPRETEiJ_G0020496) #15	Uggt2 (MGP_SPRETEiJ_G0020495) #16	Dnajc3 (MGP_SPRETEiJ_G0020494) #18	Dzip1 (MGP_SPRETEiJ_G0020493) #19	Cldn10 (MGP_SPRETEiJ_G0020492) #20	Abcc4 (MGP_SPRETEiJ_G0020491) #21	Sox21 (MGP_SPRETEiJ_G0020490) #22	Gpr180 (MGP_SPRETEiJ_G0020489) #23	Tgds (MGP_SPRETEiJ_G0020488) #24	Dct (MGP_SPRETEiJ_G0020487) #25	Gpc6 (MGP_SPRETEiJ_G0020486) #26	Gpc5 (MGP_SPRETEiJ_G0020485) #28	Slitrk5 (MGP_SPRETEiJ_G0020484) #35	Slitrk6 (MGP_SPRETEiJ_G0020483)	MGP_SPRETEiJ_G0020482	Slitrk1 (MGP_SPRETEiJ_G0020481)	Trim52 (MGP_SPRETEiJ_G0020480)	MGP_SPRETEiJ_G0020479	Spry2 (MGP_SPRETEiJ_G0020478)	Ndfip2 (MGP_SPRETEiJ_G0020477)	Rbm26 (MGP_SPRETEiJ_G0020476)	Obi1 (MGP_SPRETEiJ_G0020475)
Mouse	MODERN SPECIES	5	Dock9 (ENSMUSG00000025558)	Slc15a1 (ENSMUSG00000025557)	Stk24 (ENSMUSG00000063410) #7	Farp1 (ENSMUSG00000025555) #8	Ipo5 (ENSMUSG00000030662) #10	Rap2a (ENSMUSG00000051615) #12	Mbnl2 (ENSMUSG00000022139) #13	Oxgr1 (ENSMUSG00000044819) #14	Hs6st3 (ENSMUSG00000053465) #15	Uggt2 (ENSMUSG00000042104) #16	Dnajc3 (ENSMUSG00000022136) #18	Dzip1 (ENSMUSG00000042156) #19	Cldn10 (ENSMUSG00000022132) #20	Abcc4 (ENSMUSG00000032849) #21	Gm9376 (ENSMUSG00000092109)	Sox21 (ENSMUSG00000061517) #22	Gpr180 (ENSMUSG00000022131) #23	Tgds (ENSMUSG00000022130) #24	Dct (ENSMUSG00000022129) #25	Gpc6 (ENSMUSG00000058571) #26	Gpc5 (ENSMUSG00000022112) #28	Tpm3-rs7 (ENSMUSG00000058126)	Slitrk5 (ENSMUSG00000033214) #35	Slitrk6 (ENSMUSG00000045871)	Slitrk1 (ENSMUSG00000075478)	Trim52 (ENSMUSG00000022113)	Spry2 (ENSMUSG00000022114)	Ndfip2 (ENSMUSG00000053253)	Rbm26 (ENSMUSG00000022119)	Obi1 (ENSMUSG00000022120)	Pou4f1 (ENSMUSG00000048349)
Ryukyu mouse	MODERN SPECIES	5	Ubac2 (MGP_CAROLIEiJ_G0019608)	Dock9 (MGP_CAROLIEiJ_G0019607)	Slc15a1 (MGP_CAROLIEiJ_G0019606)	Stk24 (MGP_CAROLIEiJ_G0019605) #7	Farp1 (MGP_CAROLIEiJ_G0019604) #8	Ipo5 (MGP_CAROLIEiJ_G0019603) #10	Rap2a (MGP_CAROLIEiJ_G0019602) #12	Mbnl2 (MGP_CAROLIEiJ_G0019601) #13	Oxgr1 (MGP_CAROLIEiJ_G0019600) #14	Hs6st3 (MGP_CAROLIEiJ_G0019599) #15	Uggt2 (MGP_CAROLIEiJ_G0019598) #16	Dnajc3 (MGP_CAROLIEiJ_G0019597) #18	Dzip1 (MGP_CAROLIEiJ_G0019596) #19	Cldn10 (MGP_CAROLIEiJ_G0019595) #20	Abcc4 (MGP_CAROLIEiJ_G0019594) #21	Sox21 (MGP_CAROLIEiJ_G0019593) #22	Gpr180 (MGP_CAROLIEiJ_G0019592) #23	Tgds (MGP_CAROLIEiJ_G0019591) #24	Dct (MGP_CAROLIEiJ_G0019590) #25	Gpc6 (MGP_CAROLIEiJ_G0019589) #26	Gpc5 (MGP_CAROLIEiJ_G0019588) #28	Slitrk5 (MGP_CAROLIEiJ_G0019587) #35	Slitrk6 (MGP_CAROLIEiJ_G0019586)	Slitrk1 (MGP_CAROLIEiJ_G0019585)	Trim52 (MGP_CAROLIEiJ_G0019584)	MGP_CAROLIEiJ_G0019583	Spry2 (MGP_CAROLIEiJ_G0019582)	Ndfip2 (MGP_CAROLIEiJ_G0019581)	Rbm26 (MGP_CAROLIEiJ_G0019580)	Obi1 (MGP_CAROLIEiJ_G0019579)	Pou4f1 (MGP_CAROLIEiJ_G0019578)
Shrew mouse	MODERN SPECIES	21	Ubac2 (MGP_PahariEiJ_G0030625)	Dock9 (MGP_PahariEiJ_G0030624)	Slc15a1 (MGP_PahariEiJ_G0030623)	Stk24 (MGP_PahariEiJ_G0030622) #7	Farp1 (MGP_PahariEiJ_G0030621) #8	Ipo5 (MGP_PahariEiJ_G0030620) #10	Rap2a (MGP_PahariEiJ_G0030619) #12	Mbnl2 (MGP_PahariEiJ_G0030618) #13	Oxgr1 (MGP_PahariEiJ_G0030617) #14	Hs6st3 (MGP_PahariEiJ_G0030616) #15	Uggt2 (MGP_PahariEiJ_G0030615) #16	Dnajc3 (MGP_PahariEiJ_G0030614) #18	Dzip1 (MGP_PahariEiJ_G0030613) #19	Cldn10 (MGP_PahariEiJ_G0030612) #20	Abcc4 (MGP_PahariEiJ_G0030611) #21	Sox21 (MGP_PahariEiJ_G0030610) #22	Gpr180 (MGP_PahariEiJ_G0030609) #23	Tgds (MGP_PahariEiJ_G0030608) #24	Dct (MGP_PahariEiJ_G0030607) #25	Gpc6 (MGP_PahariEiJ_G0030606) #26	Gpc5 (MGP_PahariEiJ_G0030605) #28	Slitrk5 (MGP_PahariEiJ_G0030604) #35	Slitrk6 (MGP_PahariEiJ_G0030603)	Slitrk1 (MGP_PahariEiJ_G0030602)	Trim52 (MGP_PahariEiJ_G0030601)	MGP_PahariEiJ_G0030600	Spry2 (MGP_PahariEiJ_G0030599)	Ndfip2 (MGP_PahariEiJ_G0030598)	Rbm26 (MGP_PahariEiJ_G0030597)	Obi1 (MGP_PahariEiJ_G0030596)	Pou4f1 (MGP_PahariEiJ_G0030595)
Rat	MODERN SPECIES	6	Slc15a1 (ENSRNOG00000011598)	Stk24 (ENSRNOG00000011511) #7	Farp1 (ENSRNOG00000011203) #8	ENSRNOG00000066148	Ipo5 (ENSRNOG00000010989) #10	Rap2a (ENSRNOG00000051564) #12	Mbnl2 (ENSRNOG00000010737) #13	Oxgr1 (ENSRNOG00000037884) #14	Hs6st3 (ENSRNOG00000037886) #15	ENSRNOG00000063112 #16	AABR07019403.1 (ENSRNOG00000058057) #16	Dnajc3 (ENSRNOG00000010352) #18	Dzip1 (ENSRNOG00000010311) #19	Cldn10 (ENSRNOG00000010085) #20	Abcc4 (ENSRNOG00000010064) #21	Sox21 (ENSRNOG00000063983) #22	Gpr180 (ENSRNOG00000009766) #23	Tgds (ENSRNOG00000009661) #24	Dct (ENSRNOG00000008671) #25	Gpc6 (ENSRNOG00000046660) #26	LOC102548369 (ENSRNOG00000031960)	Gpc5 (ENSRNOG00000071105) #28	Slitrk5 (ENSRNOG00000009649) #35	Slitrk6 (ENSRNOG00000022337)	Slitrk1 (ENSRNOG00000009209)	ENSRNOG00000064722	Trim52 (ENSRNOG00000024509)	Spry2 (ENSRNOG00000010058)	Ndfip2 (ENSRNOG00000024022)	Rbm26 (ENSRNOG00000009836)	ENSRNOG00000065791
Upper Galilee mountains blind mole rat	MODERN SPECIES	539																Sox21 (ENSNGAG00000007556) #22	Gpr180 (ENSNGAG00000001507) #23	Tgds (ENSNGAG00000004857) #24	Dct (ENSNGAG00000016138) #25	Gpc6 (ENSNGAG00000020589) #26
Lesser Egyptian jerboa	MODERN SPECIES	43						Rap2a (ENSJJAG00000019446) #12	Mbnl2 (ENSJJAG00000018964) #13	Oxgr1 (ENSJJAG00000001685) #14	Hs6st3 (ENSJJAG00000024371) #15	ENSJJAG00000020574 #16	Dnajc3 (ENSJJAG00000019798) #18	Dzip1 (ENSJJAG00000019208) #19	Cldn10 (ENSJJAG00000009963) #20	Abcc4 (ENSJJAG00000013152) #21	ENSJJAG00000019199	Sox21 (ENSJJAG00000013313) #22	Gpr180 (ENSJJAG00000019702) #23	Tgds (ENSJJAG00000003773) #24	Dct (ENSJJAG00000004981) #25	Gpc6 (ENSJJAG00000015437) #26	Gpc5 (ENSJJAG00000003419) #28	ENSJJAG00000003316	ENSJJAG00000001423	Slitrk5 (ENSJJAG00000011603) #35	Slitrk6 (ENSJJAG00000023403)	ENSJJAG00000022768	Slitrk1 (ENSJJAG00000001901)	Spry2 (ENSJJAG00000014691)	Ndfip2 (ENSJJAG00000011345)	Rbm26 (ENSJJAG00000022458)	Obi1 (ENSJJAG00000017901)