Bilateria	ANCESTRAL SPECIES																	ENSGT00940000162795 #22
Chordata	ANCESTRAL SPECIES																	ENSGT00940000162795 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000162795 #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000162795 #22
Euteleostomi	ANCESTRAL SPECIES	12	ENSGT00940000158972	ENSGT00940000157245	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Sarcopterygii	ANCESTRAL SPECIES	11	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Tetrapoda	ANCESTRAL SPECIES		ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Amniota	ANCESTRAL SPECIES		ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Mammalia	ANCESTRAL SPECIES		ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Theria	ANCESTRAL SPECIES	1	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Eutheria	ANCESTRAL SPECIES	17	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Primates	ANCESTRAL SPECIES	26	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Strepsirrhini	ANCESTRAL SPECIES	27	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Bushbaby	MODERN SPECIES	149	DOCK9 (ENSOGAG00000009993) #7	ENSOGAG00000015903 #8	ENSOGAG00000009988 #9	STK24 (ENSOGAG00000007585) #10	FARP1 (ENSOGAG00000007577) #11	ENSOGAG00000034423 #12	IPO5 (ENSOGAG00000007570) #13	MBNL2 (ENSOGAG00000017001) #14	OXGR1 (ENSOGAG00000004480) #15	ENSOGAG00000004479 #16	UGGT2 (ENSOGAG00000004472) #17	DNAJC3 (ENSOGAG00000004466) #18	DZIP1 (ENSOGAG00000004464) #19	CLDN10 (ENSOGAG00000004463) #20	ENSOGAG00000010625 #21	SOX21 (ENSOGAG00000034277) #22	GPR180 (ENSOGAG00000008126) #23	TGDS (ENSOGAG00000008122) #24	DCT (ENSOGAG00000008119) #25	ENSOGAG00000008114 #26
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00940000155972.B.i #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Lemuriformes_a	ANCESTRAL SPECIES	125	ENSGT00940000155972.B.i #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26
Coquerels sifaka	MODERN SPECIES	375					RAP2A (ENSPCOG00000018321)	MBNL2 (ENSPCOG00000020365) #14	ENSPCOG00000018521	ENSPCOG00000014961	HS6ST3 (ENSPCOG00000013081) #16	ENSPCOG00000013194	UGGT2 (ENSPCOG00000018019) #17	DNAJC3 (ENSPCOG00000019285) #18	ENSPCOG00000014782 #19	CLDN10 (ENSPCOG00000018214) #20	ABCC4 (ENSPCOG00000014386) #21	SOX21 (ENSPCOG00000025773) #22	GPR180 (ENSPCOG00000018930) #23	TGDS (ENSPCOG00000013540) #24	DCT (ENSPCOG00000002870) #25	ENSPCOG00000005333	GPC6 (ENSPCOG00000026916) #26
Greater bamboo lemur	MODERN SPECIES	359	STK24 (ENSPSMG00000014388) #10	FARP1 (ENSPSMG00000014582) #11	IPO5 (ENSPSMG00000014841) #13	RAP2A (ENSPSMG00000014873)	MBNL2 (ENSPSMG00000014968) #14	ENSPSMG00000015001	OXGR1 (ENSPSMG00000015004) #15	ENSPSMG00000015005	HS6ST3 (ENSPSMG00000015011) #16	UGGT2 (ENSPSMG00000015174) #17	DNAJC3 (ENSPSMG00000015262) #18	DZIP1 (ENSPSMG00000015335) #19	CLDN10 (ENSPSMG00000015350) #20	ENSPSMG00000015361	ABCC4 (ENSPSMG00000015535) #21	SOX21 (ENSPSMG00000015568) #22	GPR180 (ENSPSMG00000015581) #23	TGDS (ENSPSMG00000015614) #24	DCT (ENSPSMG00000015638) #25	ENSPSMG00000015648 #26
Mouse lemur	MODERN SPECIES	4	STK24 (ENSMICG00000012784) #10	ENSMICG00000029470	FARP1 (ENSMICG00000012742) #11	IPO5 (ENSMICG00000012711) #13	ENSMICG00000030097	RAP2A (ENSMICG00000041924)	MBNL2 (ENSMICG00000038018) #14	HS6ST3 (ENSMICG00000008104) #16	UGGT2 (ENSMICG00000005273) #17	DNAJC3 (ENSMICG00000017098) #18	ENSMICG00000011959 #19	CLDN10 (ENSMICG00000044281) #20	ENSMICG00000043717	ENSMICG00000044636	ABCC4 (ENSMICG00000003364) #21	SOX21 (ENSMICG00000030929) #22	GPR180 (ENSMICG00000007628) #23	TGDS (ENSMICG00000007621) #24	ENSMICG00000027259	DCT (ENSMICG00000007611) #25	GPC6 (ENSMICG00000007601) #26	GPC5 (ENSMICG00000030886)	ENSMICG00000047849	ENSMICG00000003836	SLITRK5 (ENSMICG00000035892)	SLITRK1 (ENSMICG00000005389)	SPRY2 (ENSMICG00000008542)	ENSMICG00000038396	NDFIP2 (ENSMICG00000026359)	RBM26 (ENSMICG00000010350)	OBI1 (ENSMICG00000031669)
Haplorrhini	ANCESTRAL SPECIES	28	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00940000155995 #8	ENSGT00940000153476.b.m.a #10	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Catarrhini	ANCESTRAL SPECIES	21	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00910000147734	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00910000147378	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00900000141067.e.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00910000147734	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00910000147378	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00900000141067.e.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00550000074988.v
Hominidae	ANCESTRAL SPECIES	23	ENSGT00940000153476.b.m.a #10	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00910000147378	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00900000141067.e.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00550000074988.v
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00940000153476.b.m.a #10	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502.g #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00910000147378	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00390000016209.d	ENSGT00940000155099.b	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00900000141067.e.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b
Gorilla	MODERN SPECIES	4	ENSGGOG00000026813	STK24 (ENSGGOG00000001983) #10	FARP1 (ENSGGOG00000004930) #11	RNF113B (ENSGGOG00000023052)	IPO5 (ENSGGOG00000008742) #13	RAP2A (ENSGGOG00000039196)	MBNL2 (ENSGGOG00000008349) #14	ENSGGOG00000041513	ENSGGOG00000036222	ENSGGOG00000022541 #16	UGGT2 (ENSGGOG00000010803) #17	DNAJC3 (ENSGGOG00000001314) #18	DZIP1 (ENSGGOG00000016859) #19	CLDN10 (ENSGGOG00000027541) #20	ABCC4 (ENSGGOG00000004265) #21	SOX21 (ENSGGOG00000003177) #22	ENSGGOG00000038534	GPR180 (ENSGGOG00000026438) #23	TGDS (ENSGGOG00000010704) #24	DCT (ENSGGOG00000016275) #25	GPC6 (ENSGGOG00000028184) #26	GPC5 (ENSGGOG00000015066)	ENSGGOG00000041124	ENSGGOG00000022614	ENSGGOG00000022747 ##10	SLITRK5 (ENSGGOG00000009585)	ENSGGOG00000041968	ENSGGOG00000038856	SLITRK6 (ENSGGOG00000023334)	SLITRK1 (ENSGGOG00000024834)	SPRY2 (ENSGGOG00000011148)
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000153476.b.m.a #10	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502.g #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00390000016209.d	ENSGT00940000155099.b	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Human	MODERN SPECIES	4	DOCK9 (ENSG00000088387) #7	SLC15A1 (ENSG00000088386) #8	STK24 (ENSG00000102572) #10	RNF113B (ENSG00000139797)	FARP1 (ENSG00000152767) #11	IPO5 (ENSG00000065150) #13	RAP2A (ENSG00000125249)	MBNL2 (ENSG00000139793) #14	OXGR1 (ENSG00000165621) #15	HS6ST3 (ENSG00000185352) #16	UGGT2 (ENSG00000102595) #17	DNAJC3 (ENSG00000102580) #18	DZIP1 (ENSG00000134874) #19	CLDN10 (ENSG00000134873) #20	ABCC4 (ENSG00000125257) #21	SOX21 (ENSG00000125285) #22	GPR180 (ENSG00000152749) #23	TGDS (ENSG00000088451) #24	DCT (ENSG00000080166) #25	GPC6 (ENSG00000183098) #26	GPC5 (ENSG00000179399)	SLITRK5 (ENSG00000165300)	SLITRK6 (ENSG00000184564)	SLITRK1 (ENSG00000178235)	SPRY2 (ENSG00000136158)	NDFIP2 (ENSG00000102471)	RBM26 (ENSG00000139746)	OBI1 (ENSG00000152193)	POU4F1 (ENSG00000152192)	EDNRB (ENSG00000136160)	SLAIN1 (ENSG00000139737)
Orangutan	MODERN SPECIES	4	SLC15A1 (ENSPPYG00000005462) #8	STK24 (ENSPPYG00000005461) #10	RNF113B (ENSPPYG00000005460)	FARP1 (ENSPPYG00000005459) #11	IPO5 (ENSPPYG00000005458) #13	RAP2A (ENSPPYG00000031802)	MBNL2 (ENSPPYG00000005456) #14	OXGR1 (ENSPPYG00000005455) #15	ENSPPYG00000005454	HS6ST3 (ENSPPYG00000032530) #16	UGGT2 (ENSPPYG00000005452) #17	DNAJC3 (ENSPPYG00000005451) #18	DZIP1 (ENSPPYG00000005450) #19	CLDN10 (ENSPPYG00000005449) #20	ABCC4 (ENSPPYG00000005448) #21	SOX21 (ENSPPYG00000005446) #22	GPR180 (ENSPPYG00000005445) #23	TGDS (ENSPPYG00000005444) #24	DCT (ENSPPYG00000005443) #25	GPC6 (ENSPPYG00000005442) #26	GPC5 (ENSPPYG00000005441)	SLITRK5 (ENSPPYG00000005437)	SLITRK6 (ENSPPYG00000005436)	SLITRK1 (ENSPPYG00000005434)	NDFIP2 (ENSPPYG00000005431)	RBM26 (ENSPPYG00000005430)	OBI1 (ENSPPYG00000005429)	POU4F1 (ENSPPYG00000005428)	EDNRB (ENSPPYG00000029747)	SLAIN1 (ENSPPYG00000005427)	SCEL (ENSPPYG00000005426)
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00910000147734	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00910000147378	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00900000141067.e.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00940000155318 #11	ENSGT00390000016292.g.b.a	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00910000147734	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00910000147378	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00900000141067.e.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00550000074988.v
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00390000016292.g.b.a	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00950000182803.B.d.b.v.a	ENSGT00390000004600.b.b #17	ENSGT00910000147734	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00910000147378	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00900000141067.e.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000154674.i.b.b	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a
Macaca	ANCESTRAL SPECIES	19	ENSGT00390000016292.g.b.a	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00950000182803.B.d.b.v.a	ENSGT00390000004600.b.b #17	ENSGT00910000147734	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000154674.i.b.b	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Macaca_a	ANCESTRAL SPECIES																	ENSGT00940000162795 #22
Rhesus	MODERN SPECIES	8	STK24 (ENSMMUG00000009173) #10	RNF113B (ENSMMUG00000054368)	FARP1 (ENSMMUG00000009890) #11	IPO5 (ENSMMUG00000013531) #13	RAP2A (ENSMMUG00000062318)	MBNL2 (ENSMMUG00000022744) #14	OXGR1 (ENSMMUG00000064141) #15	ENSMMUG00000050273	HS6ST3 (ENSMMUG00000005847) #16	UGGT2 (ENSMMUG00000005842) #17	DNAJC3 (ENSMMUG00000040500) #18	DZIP1 (ENSMMUG00000005839) #19	CLDN10 (ENSMMUG00000009721) #20	ABCC4 (ENSMMUG00000021807) #21	ENSMMUG00000054912	SOX21 (ENSMMUG00000046362) #22	GPR180 (ENSMMUG00000013059) #23	TGDS (ENSMMUG00000013063) #24	DCT (ENSMMUG00000021817) #25	GPC6 (ENSMMUG00000000529) #26	ENSMMUG00000059084	ENSMMUG00000054269	GPC5 (ENSMMUG00000011376)	ENSMMUG00000049397	ENSMMUG00000057596	ENSMMUG00000051250	SLITRK5 (ENSMMUG00000002854)	ENSMMUG00000052196	SLITRK6 (ENSMMUG00000016317)	ENSMMUG00000050190	ENSMMUG00000050001
Pig-tailed macaque	MODERN SPECIES	100	STK24 (ENSMNEG00000044246) #10	FARP1 (ENSMNEG00000028074) #11	IPO5 (ENSMNEG00000034763) #13	RAP2A (ENSMNEG00000037480)	MBNL2 (ENSMNEG00000044636) #14	OXGR1 (ENSMNEG00000000275) #15	ENSMNEG00000042098	ENSMNEG00000000422	ENSMNEG00000043369	HS6ST3 (ENSMNEG00000039732) #16	UGGT2 (ENSMNEG00000045319) #17	DNAJC3 (ENSMNEG00000030321) #18	DZIP1 (ENSMNEG00000030661) #19	CLDN10 (ENSMNEG00000039056) #20	ABCC4 (ENSMNEG00000031488) #21	SOX21 (ENSMNEG00000008735) #22	ENSMNEG00000020250	GPR180 (ENSMNEG00000043105) #23	TGDS (ENSMNEG00000041559) #24	DCT (ENSMNEG00000033707) #25	ENSMNEG00000034295	GPC6 (ENSMNEG00000031962) #26	GPC5 (ENSMNEG00000039401)	ENSMNEG00000041339
Cercopithecinae_b	ANCESTRAL SPECIES	42	ENSGT00940000155318 #11	ENSGT00390000016292.g.b.a	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00950000182803.B.d.b.v.a	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00910000147378	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00900000141067.e.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000154674.i.b.b	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a
Cercopithecinae_d	ANCESTRAL SPECIES	106	ENSGT00940000155318 #11	ENSGT00390000016292.g.b.a	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT01020000230401.a.a.a.i.b	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00950000182803.B.d.b.v.a	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00910000147378	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT00390000011084.h	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00910000147010	ENSGT00900000141067.e.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000165870	ENSGT00940000154674.i.b.b
Sooty mangabey	MODERN SPECIES	444	SLC15A1 (ENSCATG00000028950) #8	STK24 (ENSCATG00000027583) #10	FARP1 (ENSCATG00000029998) #11	IPO5 (ENSCATG00000038175) #13	RAP2A (ENSCATG00000034241)	MBNL2 (ENSCATG00000040406) #14	OXGR1 (ENSCATG00000020401) #15	ENSCATG00000020783	HS6ST3 (ENSCATG00000034180) #16	ENSCATG00000030862	UGGT2 (ENSCATG00000029500) #17	DNAJC3 (ENSCATG00000045012) #18	DZIP1 (ENSCATG00000038545) #19	CLDN10 (ENSCATG00000016865) #20	ABCC4 (ENSCATG00000040794) #21	SOX21 (ENSCATG00000007563) #22	ENSCATG00000009550	GPR180 (ENSCATG00000043062) #23	TGDS (ENSCATG00000033793) #24	DCT (ENSCATG00000015377) #25	GPC6 (ENSCATG00000033812) #26	ENSCATG00000028732	GPC5 (ENSCATG00000035480)	SLITRK5 (ENSCATG00000016689)	ENSCATG00000016144	ENSCATG00000009414	SLITRK6 (ENSCATG00000016872)	ENSCATG00000037856	SLITRK1 (ENSCATG00000019541)	ENSCATG00000040456	ENSCATG00000042513
Olive baboon	MODERN SPECIES	6	IPO5 (ENSPANG00000009971) #13	ENSPANG00000051102	RAP2A (ENSPANG00000038481)	MBNL2 (ENSPANG00000007199) #14	ENSPANG00000044190	ENSPANG00000040995	OXGR1 (ENSPANG00000015363) #15	HS6ST3 (ENSPANG00000023816) #16	UGGT2 (ENSPANG00000022725) #17	ENSPANG00000039742	DNAJC3 (ENSPANG00000017673) #18	DZIP1 (ENSPANG00000014288) #19	CLDN10 (ENSPANG00000007231) #20	ABCC4 (ENSPANG00000026361) #21	ENSPANG00000048037	SOX21 (ENSPANG00000042059) #22	GPR180 (ENSPANG00000004613) #23	TGDS (ENSPANG00000015280) #24	DCT (ENSPANG00000022422) #25	ENSPANG00000040944	GPC6 (ENSPANG00000029836) #26	GPC5 (ENSPANG00000004995)	ENSPANG00000038257	ENSPANG00000047478	ENSPANG00000044812	SLITRK5 (ENSPANG00000012750)	SLITRK6 (ENSPANG00000013285)	ENSPANG00000037928	SLITRK1 (ENSPANG00000006605)	ENSPANG00000031941	ENSPANG00000041737
Vervet Monkey	MODERN SPECIES	22	SLC15A1 (ENSCSAG00000017516) #8	STK24 (ENSCSAG00000017517) #10	RNF113B (ENSCSAG00000000222)	FARP1 (ENSCSAG00000017518) #11	IPO5 (ENSCSAG00000017519) #13	ENSCSAG00000017520	RAP2A (ENSCSAG00000017521)	MBNL2 (ENSCSAG00000017523) #14	OXGR1 (ENSCSAG00000000223) #15	ENSCSAG00000000225 #16	UGGT2 (ENSCSAG00000017524) #17	DNAJC3 (ENSCSAG00000017525) #18	DZIP1 (ENSCSAG00000017526) #19	CLDN10 (ENSCSAG00000017528) #20	ABCC4 (ENSCSAG00000017533) #21	SOX21 (ENSCSAG00000000226) #22	GPR180 (ENSCSAG00000017536) #23	TGDS (ENSCSAG00000017539) #24	DCT (ENSCSAG00000017543) #25	SLITRK5 (ENSCSAG00000000227)	SLITRK6 (ENSCSAG00000000228)	SLITRK1 (ENSCSAG00000000229)	ENSCSAG00000000230	SPRY2 (ENSCSAG00000018623)	NDFIP2 (ENSCSAG00000017557)	RBM26 (ENSCSAG00000017563)	OBI1 (ENSCSAG00000017565)	EDNRB (ENSCSAG00000017566)	SLAIN1 (ENSCSAG00000017572)	SCEL (ENSCSAG00000017575)	MYCBP2 (ENSCSAG00000017585)
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b.m.a #10	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT00630000089910.ib.b.b	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000002200.a.b.d	ENSGT00390000012721.b.k	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512
Cebidae	ANCESTRAL SPECIES	26	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b.m.a #10	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT00630000089910.ib.b.b	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718
Marmoset	MODERN SPECIES		STK24 (ENSCJAG00000004508) #10	RNF113B (ENSCJAG00000004501)	FARP1 (ENSCJAG00000004456) #11	IPO5 (ENSCJAG00000004323) #13	ENSCJAG00000078079	MBNL2 (ENSCJAG00000004294) #14	OXGR1 (ENSCJAG00000043695) #15	HS6ST3 (ENSCJAG00000052214) #16	UGGT2 (ENSCJAG00000003433) #17	DZIP1 (ENSCJAG00000003362) #19	DNAJC3 (ENSCJAG00000003402) #18	ENSCJAG00000073919	ENSCJAG00000082262	ABCC4 (ENSCJAG00000003300) #21	ENSCJAG00000074268	ENSCJAG00000046080 #22	GPR180 (ENSCJAG00000043138) #23	TGDS (ENSCJAG00000003252) #24	DCT (ENSCJAG00000003225) #25	ENSCJAG00000065150	GPC6 (ENSCJAG00000003215) #26	GPC5 (ENSCJAG00000003211)	ENSCJAG00000003196	SLITRK5 (ENSCJAG00000003189)	SLITRK6 (ENSCJAG00000003187)
Cebidae_a	ANCESTRAL SPECIES	60	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b.m.a #10	ENSGT00940000155318 #11	ENSGT00390000016292.g.b	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT00630000089910.ib.b.b	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a
Capuchin	MODERN SPECIES	158									ENSCCAG00000027380 #17	DNAJC3 (ENSCCAG00000031987) #18	DZIP1 (ENSCCAG00000020255) #19	ENSCCAG00000023319	CLDN10 (ENSCCAG00000022967) #20	ABCC4 (ENSCCAG00000023045) #21	ENSCCAG00000036390	SOX21 (ENSCCAG00000031766) #22	ENSCCAG00000026644 #23	TGDS (ENSCCAG00000019756) #24	DCT (ENSCCAG00000027680) #25	GPC6 (ENSCCAG00000033510) #26	ENSCCAG00000032119	GPC5 (ENSCCAG00000011217)
Mas night monkey	MODERN SPECIES	1239	DOCK9 (ENSANAG00000024717) #7	SLC15A1 (ENSANAG00000029848) #8	STK24 (ENSANAG00000023636) #10	FARP1 (ENSANAG00000027561) #11	RNF113B (ENSANAG00000020431)	IPO5 (ENSANAG00000028954) #13	RAP2A (ENSANAG00000020208)	MBNL2 (ENSANAG00000034762) #14	HS6ST3 (ENSANAG00000034705) #16	UGGT2 (ENSANAG00000037596) #17	ENSANAG00000031790	DNAJC3 (ENSANAG00000011626) #18	ENSANAG00000020960 #19	CLDN10 (ENSANAG00000024929) #20	ABCC4 (ENSANAG00000027845) #21	SOX21 (ENSANAG00000034249) #22	GPR180 (ENSANAG00000023046) #23	TGDS (ENSANAG00000028832) #24	DCT (ENSANAG00000028131) #25	ENSANAG00000024991	ENSANAG00000031488 #26
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Glires	ANCESTRAL SPECIES	22	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Rodentia	ANCESTRAL SPECIES	22	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Myomorpha	ANCESTRAL SPECIES	32	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Muroidea	ANCESTRAL SPECIES	25	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.e #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000154461.`c	ENSGT00940000154294.k.a	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.e #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Chinese hamster chok1gshd	MODERN SPECIES	3	Stk24 (ENSCGRG00001017876) #10	Farp1 (ENSCGRG00001014318) #11	ENSCGRG00001005522 #13	ENSCGRG00001010599	Rap2a (ENSCGRG00001009677)	ENSCGRG00001010070	Mbnl2 (ENSCGRG00001015686) #14	Oxgr1 (ENSCGRG00001004650) #15	Hs6st3 (ENSCGRG00001019622) #16	Uggt2 (ENSCGRG00001016376) #17	Dnajc3 (ENSCGRG00001016665) #18	Dzip1 (ENSCGRG00001024642) #19	Cldn10 (ENSCGRG00001018980) #20	Abcc4 (ENSCGRG00001005625) #21	ENSCGRG00001022896	Sox21 (ENSCGRG00001001959) #22	Gpr180 (ENSCGRG00001013522) #23	Tgds (ENSCGRG00001000527) #24	Dct (ENSCGRG00001019389) #25	Gpc6 (ENSCGRG00001014308) #26	ENSCGRG00001022279	Gpc5 (ENSCGRG00001012658)	ENSCGRG00001014085	ENSCGRG00001000596	Slitrk5 (ENSCGRG00001006071)	Slitrk6 (ENSCGRG00001002482)	Slitrk1 (ENSCGRG00001002013)	Trim52 (ENSCGRG00001002565)	ENSCGRG00001007508	Spry2 (ENSCGRG00001006571)	Ndfip2 (ENSCGRG00001023296)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.e #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000154461.`c	ENSGT00940000154294.k.a	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Prairie vole	MODERN SPECIES	4	ENSMOCG00000011275	Dock9 (ENSMOCG00000012637) #7	Slc15a1 (ENSMOCG00000012747) #8	Stk24 (ENSMOCG00000019469) #10	Farp1 (ENSMOCG00000017345) #11	ENSMOCG00000019165 #13	Rap2a (ENSMOCG00000013779)	Mbnl2 (ENSMOCG00000000755) #14	Oxgr1 (ENSMOCG00000017757) #15	Hs6st3 (ENSMOCG00000017153) #16	Uggt2 (ENSMOCG00000019627) #17	Dnajc3 (ENSMOCG00000004547) #18	Dzip1 (ENSMOCG00000009668) #19	Cldn10 (ENSMOCG00000001906) #20	Abcc4 (ENSMOCG00000001960) #21	Sox21 (ENSMOCG00000011400) #22	Gpr180 (ENSMOCG00000017995) #23	Tgds (ENSMOCG00000021583) #24	Dct (ENSMOCG00000019333) #25	Gpc6 (ENSMOCG00000022265) #26	Gpc5 (ENSMOCG00000011002)	ENSMOCG00000003746	Slitrk5 (ENSMOCG00000019120)	ENSMOCG00000006881	ENSMOCG00000017964	Slitrk6 (ENSMOCG00000013923)	ENSMOCG00000005944	ENSMOCG00000007797	ENSMOCG00000017655	Slitrk1 (ENSMOCG00000008123)	ENSMOCG00000014539
Murinae	ANCESTRAL SPECIES	16	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Mus	ANCESTRAL SPECIES	8	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00900000143753	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Mus_A	ANCESTRAL SPECIES	12	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00900000143753	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Mus_B	ANCESTRAL SPECIES	11	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Mus_C	ANCESTRAL SPECIES	20	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.c #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00390000000475.sb.bc.a	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Steppe mouse	MODERN SPECIES	3368	Slc15a1 (ENSMSIG00000026313) #8	Stk24 (ENSMSIG00000026291) #10	Farp1 (ENSMSIG00000026263) #11	Ipo5 (ENSMSIG00000026229) #13	ENSMSIG00000026224	Rap2a (ENSMSIG00000026221)	Mbnl2 (ENSMSIG00000025784) #14	Oxgr1 (ENSMSIG00000025777) #15	ENSMSIG00000025775 #16	Uggt2 (ENSMSIG00000025703) #17	Dnajc3 (ENSMSIG00000025655) #18	Dzip1 (ENSMSIG00000025585) #19	Cldn10 (ENSMSIG00000025545) #20	Abcc4 (ENSMSIG00000025421) #21	ENSMSIG00000025402	Sox21 (ENSMSIG00000025390) #22	Gpr180 (ENSMSIG00000025376) #23	Tgds (ENSMSIG00000025345) #24	Dct (ENSMSIG00000025337) #25	Gpc6 (ENSMSIG00000025289) #26	ENSMSIG00000025276	Gpc5 (ENSMSIG00000025251)
spretus	MODERN SPECIES	5	Ubac2 (MGP_SPRETEiJ_G0020505)	Dock9 (MGP_SPRETEiJ_G0020504) #7	Slc15a1 (MGP_SPRETEiJ_G0020503) #8	Stk24 (MGP_SPRETEiJ_G0020502) #10	Farp1 (MGP_SPRETEiJ_G0020501) #11	Ipo5 (MGP_SPRETEiJ_G0020500) #13	Rap2a (MGP_SPRETEiJ_G0020499)	Mbnl2 (MGP_SPRETEiJ_G0020498) #14	Oxgr1 (MGP_SPRETEiJ_G0020497) #15	Hs6st3 (MGP_SPRETEiJ_G0020496) #16	Uggt2 (MGP_SPRETEiJ_G0020495) #17	Dnajc3 (MGP_SPRETEiJ_G0020494) #18	Dzip1 (MGP_SPRETEiJ_G0020493) #19	Cldn10 (MGP_SPRETEiJ_G0020492) #20	Abcc4 (MGP_SPRETEiJ_G0020491) #21	Sox21 (MGP_SPRETEiJ_G0020490) #22	Gpr180 (MGP_SPRETEiJ_G0020489) #23	Tgds (MGP_SPRETEiJ_G0020488) #24	Dct (MGP_SPRETEiJ_G0020487) #25	Gpc6 (MGP_SPRETEiJ_G0020486) #26	Gpc5 (MGP_SPRETEiJ_G0020485)	Slitrk5 (MGP_SPRETEiJ_G0020484)	Slitrk6 (MGP_SPRETEiJ_G0020483)	MGP_SPRETEiJ_G0020482	Slitrk1 (MGP_SPRETEiJ_G0020481)	Trim52 (MGP_SPRETEiJ_G0020480)	MGP_SPRETEiJ_G0020479	Spry2 (MGP_SPRETEiJ_G0020478)	Ndfip2 (MGP_SPRETEiJ_G0020477)	Rbm26 (MGP_SPRETEiJ_G0020476)	Obi1 (MGP_SPRETEiJ_G0020475)
Mouse	MODERN SPECIES	5	Dock9 (ENSMUSG00000025558) #7	Slc15a1 (ENSMUSG00000025557) #8	Stk24 (ENSMUSG00000063410) #10	Farp1 (ENSMUSG00000025555) #11	Ipo5 (ENSMUSG00000030662) #13	Rap2a (ENSMUSG00000051615)	Mbnl2 (ENSMUSG00000022139) #14	Oxgr1 (ENSMUSG00000044819) #15	Hs6st3 (ENSMUSG00000053465) #16	Uggt2 (ENSMUSG00000042104) #17	Dnajc3 (ENSMUSG00000022136) #18	Dzip1 (ENSMUSG00000042156) #19	Cldn10 (ENSMUSG00000022132) #20	Abcc4 (ENSMUSG00000032849) #21	Gm9376 (ENSMUSG00000092109)	Sox21 (ENSMUSG00000061517) #22	Gpr180 (ENSMUSG00000022131) #23	Tgds (ENSMUSG00000022130) #24	Dct (ENSMUSG00000022129) #25	Gpc6 (ENSMUSG00000058571) #26	Gpc5 (ENSMUSG00000022112)	Tpm3-rs7 (ENSMUSG00000058126)	Slitrk5 (ENSMUSG00000033214)	Slitrk6 (ENSMUSG00000045871)	Slitrk1 (ENSMUSG00000075478)	Trim52 (ENSMUSG00000022113)	Spry2 (ENSMUSG00000022114)	Ndfip2 (ENSMUSG00000053253)	Rbm26 (ENSMUSG00000022119)	Obi1 (ENSMUSG00000022120)	Pou4f1 (ENSMUSG00000048349)
Ryukyu mouse	MODERN SPECIES	5	Ubac2 (MGP_CAROLIEiJ_G0019608)	Dock9 (MGP_CAROLIEiJ_G0019607) #7	Slc15a1 (MGP_CAROLIEiJ_G0019606) #8	Stk24 (MGP_CAROLIEiJ_G0019605) #10	Farp1 (MGP_CAROLIEiJ_G0019604) #11	Ipo5 (MGP_CAROLIEiJ_G0019603) #13	Rap2a (MGP_CAROLIEiJ_G0019602)	Mbnl2 (MGP_CAROLIEiJ_G0019601) #14	Oxgr1 (MGP_CAROLIEiJ_G0019600) #15	Hs6st3 (MGP_CAROLIEiJ_G0019599) #16	Uggt2 (MGP_CAROLIEiJ_G0019598) #17	Dnajc3 (MGP_CAROLIEiJ_G0019597) #18	Dzip1 (MGP_CAROLIEiJ_G0019596) #19	Cldn10 (MGP_CAROLIEiJ_G0019595) #20	Abcc4 (MGP_CAROLIEiJ_G0019594) #21	Sox21 (MGP_CAROLIEiJ_G0019593) #22	Gpr180 (MGP_CAROLIEiJ_G0019592) #23	Tgds (MGP_CAROLIEiJ_G0019591) #24	Dct (MGP_CAROLIEiJ_G0019590) #25	Gpc6 (MGP_CAROLIEiJ_G0019589) #26	Gpc5 (MGP_CAROLIEiJ_G0019588)	Slitrk5 (MGP_CAROLIEiJ_G0019587)	Slitrk6 (MGP_CAROLIEiJ_G0019586)	Slitrk1 (MGP_CAROLIEiJ_G0019585)	Trim52 (MGP_CAROLIEiJ_G0019584)	MGP_CAROLIEiJ_G0019583	Spry2 (MGP_CAROLIEiJ_G0019582)	Ndfip2 (MGP_CAROLIEiJ_G0019581)	Rbm26 (MGP_CAROLIEiJ_G0019580)	Obi1 (MGP_CAROLIEiJ_G0019579)	Pou4f1 (MGP_CAROLIEiJ_G0019578)
Shrew mouse	MODERN SPECIES	21	Ubac2 (MGP_PahariEiJ_G0030625)	Dock9 (MGP_PahariEiJ_G0030624) #7	Slc15a1 (MGP_PahariEiJ_G0030623) #8	Stk24 (MGP_PahariEiJ_G0030622) #10	Farp1 (MGP_PahariEiJ_G0030621) #11	Ipo5 (MGP_PahariEiJ_G0030620) #13	Rap2a (MGP_PahariEiJ_G0030619)	Mbnl2 (MGP_PahariEiJ_G0030618) #14	Oxgr1 (MGP_PahariEiJ_G0030617) #15	Hs6st3 (MGP_PahariEiJ_G0030616) #16	Uggt2 (MGP_PahariEiJ_G0030615) #17	Dnajc3 (MGP_PahariEiJ_G0030614) #18	Dzip1 (MGP_PahariEiJ_G0030613) #19	Cldn10 (MGP_PahariEiJ_G0030612) #20	Abcc4 (MGP_PahariEiJ_G0030611) #21	Sox21 (MGP_PahariEiJ_G0030610) #22	Gpr180 (MGP_PahariEiJ_G0030609) #23	Tgds (MGP_PahariEiJ_G0030608) #24	Dct (MGP_PahariEiJ_G0030607) #25	Gpc6 (MGP_PahariEiJ_G0030606) #26	Gpc5 (MGP_PahariEiJ_G0030605)	Slitrk5 (MGP_PahariEiJ_G0030604)	Slitrk6 (MGP_PahariEiJ_G0030603)	Slitrk1 (MGP_PahariEiJ_G0030602)	Trim52 (MGP_PahariEiJ_G0030601)	MGP_PahariEiJ_G0030600	Spry2 (MGP_PahariEiJ_G0030599)	Ndfip2 (MGP_PahariEiJ_G0030598)	Rbm26 (MGP_PahariEiJ_G0030597)	Obi1 (MGP_PahariEiJ_G0030596)	Pou4f1 (MGP_PahariEiJ_G0030595)
Rat	MODERN SPECIES	6	Slc15a1 (ENSRNOG00000011598) #8	Stk24 (ENSRNOG00000011511) #10	Farp1 (ENSRNOG00000011203) #11	ENSRNOG00000066148	Ipo5 (ENSRNOG00000010989) #13	Rap2a (ENSRNOG00000051564)	Mbnl2 (ENSRNOG00000010737) #14	Oxgr1 (ENSRNOG00000037884) #15	Hs6st3 (ENSRNOG00000037886) #16	ENSRNOG00000063112 #17	AABR07019403.1 (ENSRNOG00000058057) #17	Dnajc3 (ENSRNOG00000010352) #18	Dzip1 (ENSRNOG00000010311) #19	Cldn10 (ENSRNOG00000010085) #20	Abcc4 (ENSRNOG00000010064) #21	Sox21 (ENSRNOG00000063983) #22	Gpr180 (ENSRNOG00000009766) #23	Tgds (ENSRNOG00000009661) #24	Dct (ENSRNOG00000008671) #25	Gpc6 (ENSRNOG00000046660) #26	LOC102548369 (ENSRNOG00000031960)	Gpc5 (ENSRNOG00000071105)	Slitrk5 (ENSRNOG00000009649)	Slitrk6 (ENSRNOG00000022337)	Slitrk1 (ENSRNOG00000009209)	ENSRNOG00000064722	Trim52 (ENSRNOG00000024509)	Spry2 (ENSRNOG00000010058)	Ndfip2 (ENSRNOG00000024022)	Rbm26 (ENSRNOG00000009836)	ENSRNOG00000065791
Upper Galilee mountains blind mole rat	MODERN SPECIES	539																Sox21 (ENSNGAG00000007556) #22	Gpr180 (ENSNGAG00000001507) #23	Tgds (ENSNGAG00000004857) #24	Dct (ENSNGAG00000016138) #25	Gpc6 (ENSNGAG00000020589) #26
Lesser Egyptian jerboa	MODERN SPECIES	43						Rap2a (ENSJJAG00000019446)	Mbnl2 (ENSJJAG00000018964) #14	Oxgr1 (ENSJJAG00000001685) #15	Hs6st3 (ENSJJAG00000024371) #16	ENSJJAG00000020574 #17	Dnajc3 (ENSJJAG00000019798) #18	Dzip1 (ENSJJAG00000019208) #19	Cldn10 (ENSJJAG00000009963) #20	Abcc4 (ENSJJAG00000013152) #21	ENSJJAG00000019199	Sox21 (ENSJJAG00000013313) #22	Gpr180 (ENSJJAG00000019702) #23	Tgds (ENSJJAG00000003773) #24	Dct (ENSJJAG00000004981) #25	Gpc6 (ENSJJAG00000015437) #26	Gpc5 (ENSJJAG00000003419)	ENSJJAG00000003316	ENSJJAG00000001423	Slitrk5 (ENSJJAG00000011603)	Slitrk6 (ENSJJAG00000023403)	ENSJJAG00000022768 ##12	Slitrk1 (ENSJJAG00000001901)	Spry2 (ENSJJAG00000014691)	Ndfip2 (ENSJJAG00000011345)	Rbm26 (ENSJJAG00000022458)	Obi1 (ENSJJAG00000017901)
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT01100000263536.C	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT01100000263536.C	ENSGT00940000155972.B.e #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b.t #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Naked mole-rat female	MODERN SPECIES	2	MBNL2 (ENSHGLG00000000575) #14	ENSHGLG00000035007	OXGR1 (ENSHGLG00000000211) #15	ENSHGLG00000034517	ENSHGLG00000047293	HS6ST3 (ENSHGLG00000003455) #16	UGGT2 (ENSHGLG00000001100) #17	DNAJC3 (ENSHGLG00000003951) #18	DZIP1 (ENSHGLG00000002976) #19	CLDN10 (ENSHGLG00000001257) #20	ENSHGLG00000042681	ENSHGLG00000011718 #21	ENSHGLG00000048406	ENSHGLG00000008312	ENSHGLG00000006878	ENSHGLG00000034930 #22	GPR180 (ENSHGLG00000002152) #23	TGDS (ENSHGLG00000000360) #24	DCT (ENSHGLG00000001562) #25	ENSHGLG00000040422	ENSHGLG00000039074	ENSHGLG00000035827	GPC6 (ENSHGLG00000001128) #26	GPC5 (ENSHGLG00000000656)	ENSHGLG00000046381	ENSHGLG00000001081	ENSHGLG00000001464	ENSHGLG00000020258	ENSHGLG00000039195	ENSHGLG00000037714	SLITRK5 (ENSHGLG00000048548)
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT01100000263536.C	ENSGT00940000155972.B.e #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b.t #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	44	ENSGT01100000263536.C	ENSGT00940000155972.B.e #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594.c	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b.t #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Long-tailed chinchilla	MODERN SPECIES	111	GPR18 (ENSCLAG00000004313)	DOCK9 (ENSCLAG00000008449) #7	SLC15A1 (ENSCLAG00000003310) #8	STK24 (ENSCLAG00000003844) #10	FARP1 (ENSCLAG00000002173) #11	IPO5 (ENSCLAG00000002384) #13	RAP2A (ENSCLAG00000003366)	MBNL2 (ENSCLAG00000003658) #14	OXGR1 (ENSCLAG00000005936) #15	HS6ST3 (ENSCLAG00000006006) #16	UGGT2 (ENSCLAG00000006413) #17	DNAJC3 (ENSCLAG00000002448) #18	DZIP1 (ENSCLAG00000002611) #19	CLDN10 (ENSCLAG00000002269) #20	ABCC4 (ENSCLAG00000002923) #21	SOX21 (ENSCLAG00000002844) #22	GPR180 (ENSCLAG00000002976) #23	TGDS (ENSCLAG00000003039) #24	DCT (ENSCLAG00000003506) #25	GPC6 (ENSCLAG00000004267) #26	GPC5 (ENSCLAG00000005754)	SLITRK5 (ENSCLAG00000006000)	SLITRK6 (ENSCLAG00000006754)	SLITRK1 (ENSCLAG00000017541)	SPRY2 (ENSCLAG00000001939)	NDFIP2 (ENSCLAG00000002158)	RBM26 (ENSCLAG00000002467)	OBI1 (ENSCLAG00000003803)	ENSCLAG00000004015	EDNRB (ENSCLAG00000003613)	SLAIN1 (ENSCLAG00000004290)
Degu	MODERN SPECIES	54											ENSODEG00000006083 #17	DNAJC3 (ENSODEG00000006169) #18	DZIP1 (ENSODEG00000004942) #19	ENSODEG00000005054 #20	ABCC4 (ENSODEG00000005168) #21	SOX21 (ENSODEG00000019452) #22	GPR180 (ENSODEG00000007113) #23	TGDS (ENSODEG00000005158) #24	DCT (ENSODEG00000005228) #25	GPC6 (ENSODEG00000005614) #26	ENSODEG00000004646	ENSODEG00000004771	ENSODEG00000004500	SLITRK5 (ENSODEG00000019086)	ENSODEG00000019180	ENSODEG00000019443	SLITRK6 (ENSODEG00000007665)	ENSODEG00000007865	ENSODEG00000019492	SLITRK1 (ENSODEG00000019121)	ENSODEG00000019094
Sciuridae	ANCESTRAL SPECIES	46	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a
Marmotini	ANCESTRAL SPECIES	29	ENSGT01100000263536.C	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b.g #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a ##12	ENSGT00940000153284.a.g.a	ENSGT00950000182922.a.a.a.b.a.b.b ##12	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381
Marmotini_b	ANCESTRAL SPECIES	39	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b.g #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a ##12	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A
Arctic ground squirrel	MODERN SPECIES	7	DOCK9 (ENSUPAG00010009595) #7	SLC15A1 (ENSUPAG00010009559) #8	STK24 (ENSUPAG00010009528) #10	FARP1 (ENSUPAG00010009445) #11	IPO5 (ENSUPAG00010009410) #13	RAP2A (ENSUPAG00010009405)	MBNL2 (ENSUPAG00010009324) #14	OXGR1 (ENSUPAG00010009319) #15	HS6ST3 (ENSUPAG00010009313) #16	UGGT2 (ENSUPAG00010009223) #17	ENSUPAG00010009192	DNAJC3 (ENSUPAG00010009173) #18	DZIP1 (ENSUPAG00010008347) #19	CLDN10 (ENSUPAG00010008292) #20	ABCC4 (ENSUPAG00010008172) #21	SOX21 (ENSUPAG00010008161) #22	GPR180 (ENSUPAG00010008151) #23	TGDS (ENSUPAG00010008093) #24	DCT (ENSUPAG00010008077) #25	GPC6 (ENSUPAG00010007999) #26	GPC5 (ENSUPAG00010007957)
Eurasian red squirrel	MODERN SPECIES	13	STK24 (ENSSVLG00005001987) #10	FARP1 (ENSSVLG00005001922) #11	ENSSVLG00005001850	IPO5 (ENSSVLG00005001723) #13	ENSSVLG00005001651	RAP2A (ENSSVLG00005001635)	MBNL2 (ENSSVLG00005001578) #14	OXGR1 (ENSSVLG00005001543) #15	HS6ST3 (ENSSVLG00005001525) #16	UGGT2 (ENSSVLG00005001478) #17	ENSSVLG00005001443	DNAJC3 (ENSSVLG00005001415) #18	DZIP1 (ENSSVLG00005001372) #19	CLDN10 (ENSSVLG00005001317) #20	ABCC4 (ENSSVLG00005001154) #21	SOX21 (ENSSVLG00005001005) #22	GPR180 (ENSSVLG00005000983) #23	ENSSVLG00005000946 #24	DCT (ENSSVLG00005000890) #25	GPC6 (ENSSVLG00005000843) #26	ENSSVLG00005000817	GPC5 (ENSSVLG00005000772)	ENSSVLG00005000662	ENSSVLG00005000636	ENSSVLG00005000588	ENSSVLG00005000573	ENSSVLG00005000550	ENSSVLG00005000527	SLITRK5 (ENSSVLG00005000517)	ENSSVLG00005000440	ENSSVLG00005000420
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.b.a.b.a.b.b.b ##21	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154
Suina	ANCESTRAL SPECIES	29	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.b.a.b.a.a ##21	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A.l #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Chacoan peccary	MODERN SPECIES	183													ENSCWAG00000008725	ENSCWAG00000007967 ##21	ENSCWAG00000005169 ##21	SOX21 (ENSCWAG00000004908) #22	GPR180 (ENSCWAG00000004884) #23	TGDS (ENSCWAG00000004863) #24	DCT (ENSCWAG00000004821) #25	GPC6 (ENSCWAG00000004762) #26	GPC5 (ENSCWAG00000004696)
Pig	MODERN SPECIES	2	RAP2A (ENSSSCG00000039812)	ENSSSCG00000051098	MBNL2 (ENSSSCG00000009505) #14	HS6ST3 (ENSSSCG00000009503) #16	UGGT2 (ENSSSCG00000009502) #17	DNAJC3 (ENSSSCG00000026082) #18	DZIP1 (ENSSSCG00000009501) #19	CLDN10 (ENSSSCG00000009500) #20	ENSSSCG00000009498 ##21	ENSSSCG00000056932	ENSSSCG00000052971	ENSSSCG00000009496 ##21	ENSSSCG00000052892 #21	ENSSSCG00000009497 ##21	ENSSSCG00000026996 ##21	SOX21 (ENSSSCG00000009494) #22	GPR180 (ENSSSCG00000009492) #23	TGDS (ENSSSCG00000009491) #24	DCT (ENSSSCG00000009490) #25	GPC6 (ENSSSCG00000009489) #26	GPC5 (ENSSSCG00000031946)	SLITRK5 (ENSSSCG00000009488)	ENSSSCG00000047038	ENSSSCG00000033995	SLITRK6 (ENSSSCG00000009486)	ENSSSCG00000035248	SLITRK1 (ENSSSCG00000009485)	ENSSSCG00000047723	ENSSSCG00000004054	ENSSSCG00000050522	SPRY2 (ENSSSCG00000009482)
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154
Camelidae	ANCESTRAL SPECIES	14	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Arabian camel	MODERN SPECIES	5	SLC15A1 (ENSCDRG00005016925) #8	STK24 (ENSCDRG00005016798) #10	FARP1 (ENSCDRG00005016709) #11	IPO5 (ENSCDRG00005016366) #13	RAP2A (ENSCDRG00005016309)	MBNL2 (ENSCDRG00005016135) #14	ENSCDRG00005016089	OXGR1 (ENSCDRG00005016080) #15	ENSCDRG00005016071	ENSCDRG00005016052 #16	UGGT2 (ENSCDRG00005015166) #17	DNAJC3 (ENSCDRG00005015015) #18	DZIP1 (ENSCDRG00005014697) #19	CLDN10 (ENSCDRG00005014632) #20	ABCC4 (ENSCDRG00005013232) ##21	SOX21 (ENSCDRG00005013161) #22	GPR180 (ENSCDRG00005013094) #23	DCT (ENSCDRG00005012774) #25	ENSCDRG00005012719 #26	ENSCDRG00005012705 #26	GPC5 (ENSCDRG00005012621)	SLITRK5 (ENSCDRG00005012509)	SLITRK6 (ENSCDRG00005012494)	SLITRK1 (ENSCDRG00005012480)	ENSCDRG00005012448	SPRY2 (ENSCDRG00005012396)	ENSCDRG00005012356	NDFIP2 (ENSCDRG00005012213)	ENSCDRG00005012182	RBM26 (ENSCDRG00005010061)	OBI1 (ENSCDRG00005009888)
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154
Cetacea	ANCESTRAL SPECIES	20	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00940000175693	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT01000000220849	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00940000175693	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00390000016769.l.b	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT01000000220849	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Odontoceti_a	ANCESTRAL SPECIES	30	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00390000016769.l.b	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT01000000220849	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00390000016769.l.b	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT01000000220849	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a.ub #16	ENSGT00950000183071.a.a.a.tb.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.a ##21	ENSGT00390000016769.l.b	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT01000000220849	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Narwhal	MODERN SPECIES	315	SLC15A1 (ENSMMNG00015020806) #8	STK24 (ENSMMNG00015020999) #10	FARP1 (ENSMMNG00015021141) #11	IPO5 (ENSMMNG00015021320) #13	RAP2A (ENSMMNG00015021384)	MBNL2 (ENSMMNG00015021419) #14	OXGR1 (ENSMMNG00015021447) #15	HS6ST3 (ENSMMNG00015021454) #16	ENSMMNG00015021472	UGGT2 (ENSMMNG00015021519) #17	DNAJC3 (ENSMMNG00015021584) #18	DZIP1 (ENSMMNG00015021612) #19	CLDN10 (ENSMMNG00015021628) #20	ABCC4 (ENSMMNG00015021669) ##21	ENSMMNG00015021695	SOX21 (ENSMMNG00015021697) #22	GPR180 (ENSMMNG00015021707) #23	TGDS (ENSMMNG00015021729) #24	DCT (ENSMMNG00015021746) #25	ENSMMNG00015021754 #26	GPC5 (ENSMMNG00015021768)	SLITRK5 (ENSMMNG00015015951)	SLITRK6 (ENSMMNG00015015967)	SPRY2 (ENSMMNG00015016096)	ENSMMNG00015016120	NDFIP2 (ENSMMNG00015016173)	RBM26 (ENSMMNG00015016282)	OBI1 (ENSMMNG00015016531)	POU4F1 (ENSMMNG00015016558)	ENSMMNG00015016576	EDNRB (ENSMMNG00015016604)
Beluga whale	MODERN SPECIES	31	FARP1 (ENSDLEG00000020202) #11	IPO5 (ENSDLEG00000020218) #13	RAP2A (ENSDLEG00000020236)	MBNL2 (ENSDLEG00000020243) #14	OXGR1 (ENSDLEG00000020251) #15	ENSDLEG00000020254 #16	ENSDLEG00000020255	ENSDLEG00000020256	ENSDLEG00000020261 #16	UGGT2 (ENSDLEG00000020264) #17	DNAJC3 (ENSDLEG00000020283) #18	DZIP1 (ENSDLEG00000020291) #19	CLDN10 (ENSDLEG00000020301) #20	ABCC4 (ENSDLEG00000020308) ##21	ENSDLEG00000020316	SOX21 (ENSDLEG00000020317) #22	GPR180 (ENSDLEG00000005503) #23	TGDS (ENSDLEG00000005526) #24	DCT (ENSDLEG00000005549) #25	ENSDLEG00000005562 #26	GPC5 (ENSDLEG00000005577)	ENSDLEG00000005613	SLITRK5 (ENSDLEG00000005616)	ENSDLEG00000005621	SLITRK6 (ENSDLEG00000005623)	SLITRK1 (ENSDLEG00000005635)	ENSDLEG00000005639	SPRY2 (ENSDLEG00000005653)	ENSDLEG00000005655	NDFIP2 (ENSDLEG00000005664)	RBM26 (ENSDLEG00000005684)
Vaquita	MODERN SPECIES	9	DOCK9 (ENSPSNG00000021210) #7	SLC15A1 (ENSPSNG00000020940) #8	STK24 (ENSPSNG00000020776) #10	FARP1 (ENSPSNG00000020666) #11	IPO5 (ENSPSNG00000020505) #13	RAP2A (ENSPSNG00000020481)	MBNL2 (ENSPSNG00000020367) #14	OXGR1 (ENSPSNG00000020307) #15	HS6ST3 (ENSPSNG00000020272) #16	UGGT2 (ENSPSNG00000020158) #17	DNAJC3 (ENSPSNG00000020076) #18	DZIP1 (ENSPSNG00000020005) #19	CLDN10 (ENSPSNG00000019929) #20	ENSPSNG00000019909	ABCC4 (ENSPSNG00000019810) ##21	SOX21 (ENSPSNG00000019784) #22	GPR180 (ENSPSNG00000019753) #23	TGDS (ENSPSNG00000019711) #24	DCT (ENSPSNG00000019619) #25	ENSPSNG00000019595	GPC6 (ENSPSNG00000019532) #26	GPC5 (ENSPSNG00000019453)	SLITRK5 (ENSPSNG00000019380)	SLITRK6 (ENSPSNG00000019347)	SLITRK1 (ENSPSNG00000019313)	ENSPSNG00000019233	SPRY2 (ENSPSNG00000019215)	ENSPSNG00000019198	NDFIP2 (ENSPSNG00000019119)	RBM26 (ENSPSNG00000018306)	ENSPSNG00000018218
Sperm whale	MODERN SPECIES	4	DOCK9 (ENSPCTG00005012203) #7	SLC15A1 (ENSPCTG00005011787) #8	FARP1 (ENSPCTG00005011529) #11	IPO5 (ENSPCTG00005010941) #13	RAP2A (ENSPCTG00005010828)	MBNL2 (ENSPCTG00005010663) #14	OXGR1 (ENSPCTG00005010619) #15	ENSPCTG00005010578	HS6ST3 (ENSPCTG00005010539) #16	UGGT2 (ENSPCTG00005010247) #17	DNAJC3 (ENSPCTG00005010155) #18	DZIP1 (ENSPCTG00005009947) #19	CLDN10 (ENSPCTG00005009798) #20	ENSPCTG00005009749	ABCC4 (ENSPCTG00005009511) ##21	SOX21 (ENSPCTG00005009464) #22	GPR180 (ENSPCTG00005009414) #23	TGDS (ENSPCTG00005009348) #24	DCT (ENSPCTG00005009298) #25	GPC6 (ENSPCTG00005009153) #26	GPC5 (ENSPCTG00005009013)	ENSPCTG00005008905	ENSPCTG00005008886	SLITRK5 (ENSPCTG00005008856)	SLITRK6 (ENSPCTG00005008841)	ENSPCTG00005008804	SLITRK1 (ENSPCTG00005008752)	ENSPCTG00005014321	ENSPCTG00005014274	ENSPCTG00005014248	SPRY2 (ENSPCTG00005014222)
Blue whale	MODERN SPECIES	9	ENSBMSG00010014118 #7	SLC15A1 (ENSBMSG00010020220) #8	STK24 (ENSBMSG00010019974) #10	FARP1 (ENSBMSG00010019949) #11	IPO5 (ENSBMSG00010019865) #13	RAP2A (ENSBMSG00010019825)	MBNL2 (ENSBMSG00010019803) #14	OXGR1 (ENSBMSG00010019776) #15	ENSBMSG00010019769	HS6ST3 (ENSBMSG00010019753) #16	UGGT2 (ENSBMSG00010019576) #17	DNAJC3 (ENSBMSG00010019510) #18	DZIP1 (ENSBMSG00010019461) #19	CLDN10 (ENSBMSG00010019414) #20	ABCC4 (ENSBMSG00010019322) ##21	SOX21 (ENSBMSG00010019291) #22	GPR180 (ENSBMSG00010019260) #23	TGDS (ENSBMSG00010019226) #24	DCT (ENSBMSG00010019181) #25	GPC6 (ENSBMSG00010019116) #26	GPC5 (ENSBMSG00010018992)	SLITRK5 (ENSBMSG00010018926)	SLITRK6 (ENSBMSG00010018912)	ENSBMSG00010018896 ##12	SLITRK1 (ENSBMSG00010018887)	ENSBMSG00010018878	ENSBMSG00010018865	ENSBMSG00010018840	ENSBMSG00010018826	SPRY2 (ENSBMSG00010018812)	ENSBMSG00010018790
Pecora	ANCESTRAL SPECIES	23	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.b.a.b.a.b.b.b.b ##21	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512	ENSGT00940000162154
Yarkand deer	MODERN SPECIES	23	ENSCHYG00000019637 ##21	ENSCHYG00000019536 ##21	ENSCHYG00000018794 ##21	ENSCHYG00000018599 ##21	ENSCHYG00000017447 ##21	ENSCHYG00000010183 ##21	ENSCHYG00000026197 ##21	ENSCHYG00000026059 ##21	ENSCHYG00000026006 ##21	ENSCHYG00000025962 ##21	ENSCHYG00000025332 ##21	ENSCHYG00000025227 ##21	ENSCHYG00000025208	ENSCHYG00000025116 ##21	ENSCHYG00000024946 ##21	SOX21 (ENSCHYG00000024893) #22	GPR180 (ENSCHYG00000024811) #23	TGDS (ENSCHYG00000024740) #24	DCT (ENSCHYG00000024705) #25	ENSCHYG00000024691	ENSCHYG00000024680	GPC6 (ENSCHYG00000024616) #26	GPC5 (ENSCHYG00000024592)	ENSCHYG00000024547	SLITRK5 (ENSCHYG00000024536)	SLITRK6 (ENSCHYG00000024524)	ENSCHYG00000024483	SLITRK1 (ENSCHYG00000024473)	SPRY2 (ENSCHYG00000024463)	ENSCHYG00000024442	NDFIP2 (ENSCHYG00000024389)
Percora_a	ANCESTRAL SPECIES	25	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.b.a.b.a.b.b.b.b ##21	ENSGT00940000153931.a.b.a.a.b.a ##21	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00390000009902.o	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00900000143501	ENSGT00390000013512
Bovidae	ANCESTRAL SPECIES	25	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.b.a.b.a.b.b.b.b ##21	ENSGT00940000153931.a.b.a.a.a.a ##21	ENSGT00940000153931.a.b.a.a.b.a.b ##21	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00390000009902.o	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Caprinae	ANCESTRAL SPECIES	28	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.b.a.b.a.b.b.b.a.a ##21	ENSGT00390000003791.a.b.a	ENSGT00940000153931.a.b.a.b.a.b.b.a.a.a.b.a.b ##21	ENSGT00390000003791.a.b.b	ENSGT00940000153931.a.b.a.b.a.b.b.a.a.a.b.a.a.a ##21	ENSGT00940000153931.a.b.a.a.a.a.b ##21	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT00940000155186.t	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00390000015489.g.b.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Rambouillet Sheep	MODERN SPECIES	1	UGGT2 (ENSOARG00020018084) #17	DNAJC3 (ENSOARG00020017767) #18	CLDN10 (ENSOARG00020017535) #20	ENSOARG00020017372 ##21	ENSOARG00020017315	ENSOARG00020013181 ##21	ENSOARG00020011134 ##21	ENSOARG00020011042 ##21	ENSOARG00020009349 ##21	ENSOARG00020009261 ##21	ENSOARG00020009084 ##21	ENSOARG00020009052	ENSOARG00020006241 ##21	ENSOARG00020004163 ##21	ENSOARG00020004016	SOX21 (ENSOARG00020004000) #22	GPR180 (ENSOARG00020003965) #23	TGDS (ENSOARG00020003861) #24	DCT (ENSOARG00020003829) #25	GPC6 (ENSOARG00020003765) #26	GPC5 (ENSOARG00020003688)	ENSOARG00020003564	SLITRK5 (ENSOARG00020003517)	ENSOARG00020003440	ENSOARG00020003428	ENSOARG00020003415	ENSOARG00020003396	ENSOARG00020003363	ENSOARG00020003340	SLITRK6 (ENSOARG00020003278)	ENSOARG00020003266
Goat	MODERN SPECIES	3	ENSCHIG00000020565 ##21	ENSCHIG00000005530 ##21	ENSCHIG00000022427 ##21	ENSCHIG00000021062	ENSCHIG00000016126 ##21	ENSCHIG00000003216 ##21	ENSCHIG00000016690 ##21	ENSCHIG00000019359	ENSCHIG00000023327 ##21	ENSCHIG00000012086 ##21	ENSCHIG00000016551	ENSCHIG00000008083 ##21	ENSCHIG00000013314 ##21	ENSCHIG00000014981 ##21	ENSCHIG00000009607 ##21	SOX21 (ENSCHIG00000019582) #22	GPR180 (ENSCHIG00000016880) #23	TGDS (ENSCHIG00000024188) #24	DCT (ENSCHIG00000008373) #25	ENSCHIG00000019275	ENSCHIG00000021900 #26	ENSCHIG00000011884	ENSCHIG00000016377	GPC5 (ENSCHIG00000012100)	ENSCHIG00000005789	SLITRK5 (ENSCHIG00000001775)	SLITRK6 (ENSCHIG00000011218)	ENSCHIG00000019136	SLITRK1 (ENSCHIG00000008324)	SPRY2 (ENSCHIG00000008359)	NDFIP2 (ENSCHIG00000013007)
Bovinae	ANCESTRAL SPECIES	29	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.b.a.b.a.b.b.b.b ##21	ENSGT00940000153931.a.b.a.a.a.a ##21	ENSGT00940000153931.a.b.a.a.b.a.b ##21	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT00940000155186.t.d	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00390000009902.o	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000153362.a.cb.a.b	ENSGT00950000183375	ENSGT00950000183183.b.b.n	ENSGT00950000183055.a.a
Bos	ANCESTRAL SPECIES	28	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.b.a.b.a.b.b.b.b ##21	ENSGT00940000153931.a.b.a.a.a.a.c.a ##21	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT00940000155186.t.d	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00390000009902.o	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000153362.a.cb.a.b.b	ENSGT00950000183375	ENSGT00950000183183.b.b.n	ENSGT00950000183055.a.a
Bos_b	ANCESTRAL SPECIES	33	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a.ub #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.a.b.a.b.a.b.b.b.a.b.a ##21	ENSGT00940000153931.a.b.a.a.a.a.c.a ##21	ENSGT00940000153931.a.b.a.a.a.b ##21	ENSGT00940000153931.a.a ##21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT00940000155186.t.d	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000157437.cb	ENSGT00940000158453.a	ENSGT00390000009902.o	ENSGT00940000160718	ENSGT00940000159810	ENSGT00940000153362.a.cb.a.b.b	ENSGT00950000183375	ENSGT00950000183183.b.b.n
Hybrid Bos Indicus	MODERN SPECIES	3	UGGT2 (ENSBIXG00005007775) #17	DNAJC3 (ENSBIXG00005027447) #18	ENSBIXG00005027477	DZIP1 (ENSBIXG00005027565) #19	CLDN10 (ENSBIXG00005027612) #20	ENSBIXG00005027701 ##21	ENSBIXG00005027727 ##21	ENSBIXG00005027795 ##21	ENSBIXG00005027922 ##21	ENSBIXG00005006976	ENSBIXG00005005345 ##21	ENSBIXG00005028769 ##21	ENSBIXG00005028850 ##21	ENSBIXG00005002147 ##21	ENSBIXG00005029027 ##21	SOX21 (ENSBIXG00005029041) #22	GPR180 (ENSBIXG00005002008) #23	TGDS (ENSBIXG00005001934) #24	ENSBIXG00005001900	DCT (ENSBIXG00005029117) #25	ENSBIXG00005005171	ENSBIXG00005005175	GPC6 (ENSBIXG00005001836) #26	GPC5 (ENSBIXG00005001799)	ENSBIXG00005029197	SLITRK5 (ENSBIXG00005001645)	ENSBIXG00005001608	SLITRK6 (ENSBIXG00005029231)	ENSBIXG00005030973	SLITRK1 (ENSBIXG00005030962)	ENSBIXG00005030959
Cow	MODERN SPECIES	3	RAP2A (ENSBTAG00000020412)	MBNL2 (ENSBTAG00000018313) #14	OXGR1 (ENSBTAG00000021345) #15	ENSBTAG00000045566	HS6ST3 (ENSBTAG00000039065) #16	UGGT2 (ENSBTAG00000004401) #17	DNAJC3 (ENSBTAG00000012065) #18	DZIP1 (ENSBTAG00000003569) #19	CLDN10 (ENSBTAG00000003568) #20	ENSBTAG00000023309 ##21	ENSBTAG00000047181 ##21	ENSBTAG00000049836	ENSBTAG00000046041 ##21	ENSBTAG00000047383 ##21	ENSBTAG00000032603 ##21	SOX21 (ENSBTAG00000022484) #22	GPR180 (ENSBTAG00000005310) #23	TGDS (ENSBTAG00000005309) #24	ENSBTAG00000051519	DCT (ENSBTAG00000002300) #25	ENSBTAG00000051263	ENSBTAG00000054671 #26	GPC6 (ENSBTAG00000040347) ##26	GPC5 (ENSBTAG00000008708)	ENSBTAG00000051320	SLITRK5 (ENSBTAG00000010129)	HTATSF1 (ENSBTAG00000032711)	SLITRK6 (ENSBTAG00000004388)	SLITRK1 (ENSBTAG00000038168)	ENSBTAG00000020684	SPRY2 (ENSBTAG00000001774)
American bison	MODERN SPECIES	3142													ENSBBBG00000024636	ENSBBBG00000006427 ##21	ENSBBBG00000024592 ##21	SOX21 (ENSBBBG00000008862) #22	GPR180 (ENSBBBG00000023965) #23	TGDS (ENSBBBG00000023942) #24	ENSBBBG00000023923	ENSBBBG00000023909	DCT (ENSBBBG00000023892) #25	ENSBBBG00000023867	ENSBBBG00000023856 #26
Siberian musk deer	MODERN SPECIES	20	IPO5 (ENSMMSG00000004364) #13	RAP2A (ENSMMSG00000004341)	MBNL2 (ENSMMSG00000004289) #14	OXGR1 (ENSMMSG00000004273) #15	ENSMMSG00000004264	HS6ST3 (ENSMMSG00000004257) #16	UGGT2 (ENSMMSG00000004211) #17	DNAJC3 (ENSMMSG00000004187) #18	DZIP1 (ENSMMSG00000004136) #19	CLDN10 (ENSMMSG00000004122) #20	ENSMMSG00000004113 ##21	ENSMMSG00000004080 ##21	ENSMMSG00000003805 ##21	ENSMMSG00000003743 ##21	ENSMMSG00000003636 ##21	SOX21 (ENSMMSG00000003591) #22	GPR180 (ENSMMSG00000003571) #23	TGDS (ENSMMSG00000003554) #24	ENSMMSG00000003536	DCT (ENSMMSG00000003522) #25	GPC6 (ENSMMSG00000003501) #26	ENSMMSG00000003489	GPC5 (ENSMMSG00000003472)	ENSMMSG00000003455	SLITRK5 (ENSMMSG00000003450)	ENSMMSG00000003445	SLITRK6 (ENSMMSG00000003439)	SLITRK1 (ENSMMSG00000003435)	SPRY2 (ENSMMSG00000003429)	NDFIP2 (ENSMMSG00000003411)	RBM26 (ENSMMSG00000002924)
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Carnivora	ANCESTRAL SPECIES	23	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Felidae	ANCESTRAL SPECIES	23	ENSGT01100000263536.C	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT01030000237045	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Panthera	ANCESTRAL SPECIES	21	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000165410.a	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT01030000237045	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000165410.a	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT01030000237045	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
leopard	MODERN SPECIES	10	SLC15A1 (ENSPPRG00000009620) #8	STK24 (ENSPPRG00000008375) #10	FARP1 (ENSPPRG00000007540) #11	IPO5 (ENSPPRG00000002425) #13	ENSPPRG00000015984	RAP2A (ENSPPRG00000000063)	MBNL2 (ENSPPRG00000022785) #14	OXGR1 (ENSPPRG00000015903) #15	HS6ST3 (ENSPPRG00000020902) #16	UGGT2 (ENSPPRG00000018295) #17	DNAJC3 (ENSPPRG00000012331) #18	ENSPPRG00000015622	DZIP1 (ENSPPRG00000011171) #19	CLDN10 (ENSPPRG00000008127) #20	ABCC4 (ENSPPRG00000006090) #21	SOX21 (ENSPPRG00000015272) #22	GPR180 (ENSPPRG00000004249) #23	TGDS (ENSPPRG00000003730) #24	DCT (ENSPPRG00000003401) #25	GPC6 (ENSPPRG00000002331) #26	GPC5 (ENSPPRG00000002229)	ENSPPRG00000000835	SLITRK5 (ENSPPRG00000015111)	SLITRK6 (ENSPPRG00000015097)	SLITRK1 (ENSPPRG00000015089)	ENSPPRG00000000214	SPRY2 (ENSPPRG00000015080)	ENSPPRG00000000040	NDFIP2 (ENSPPRG00000022750)	RBM26 (ENSPPRG00000023669)	OBI1 (ENSPPRG00000021495)
lion	MODERN SPECIES	1	DOCK9 (ENSPLOG00000000768) #7	SLC15A1 (ENSPLOG00000001043) #8	STK24 (ENSPLOG00000001101) #10	FARP1 (ENSPLOG00000001225) #11	IPO5 (ENSPLOG00000001288) #13	RAP2A (ENSPLOG00000001360)	MBNL2 (ENSPLOG00000001389) #14	OXGR1 (ENSPLOG00000001421) #15	HS6ST3 (ENSPLOG00000001429) #16	UGGT2 (ENSPLOG00000001469) #17	DNAJC3 (ENSPLOG00000001556) #18	ENSPLOG00000001580	DZIP1 (ENSPLOG00000001622) #19	ENSPLOG00000001697 #20	ABCC4 (ENSPLOG00000001751) #21	SOX21 (ENSPLOG00000001783) #22	GPR180 (ENSPLOG00000001789) #23	TGDS (ENSPLOG00000001808) #24	DCT (ENSPLOG00000001883) #25	GPC6 (ENSPLOG00000001908) #26	GPC5 (ENSPLOG00000001929)	SLITRK5 (ENSPLOG00000002017)	SLITRK6 (ENSPLOG00000002027)	SLITRK1 (ENSPLOG00000002049)	SPRY2 (ENSPLOG00000002090)	ENSPLOG00000002108	ENSPLOG00000002120	NDFIP2 (ENSPLOG00000002129)	RBM26 (ENSPLOG00000002218)	OBI1 (ENSPLOG00000002335)	EDNRB (ENSPLOG00000002351)
Cat	MODERN SPECIES		DOCK9 (ENSFCAG00000004862) #7	SLC15A1 (ENSFCAG00000014846) #8	STK24 (ENSFCAG00000014844) #10	FARP1 (ENSFCAG00000014842) #11	IPO5 (ENSFCAG00000025657) #13	RAP2A (ENSFCAG00000044348)	MBNL2 (ENSFCAG00000028336) #14	OXGR1 (ENSFCAG00000027077) #15	HS6ST3 (ENSFCAG00000027133) #16	UGGT2 (ENSFCAG00000002545) #17	ENSFCAG00000034799	DNAJC3 (ENSFCAG00000028274) #18	DZIP1 (ENSFCAG00000002928) #19	CLDN10 (ENSFCAG00000034754) #20	ABCC4 (ENSFCAG00000009172) #21	SOX21 (ENSFCAG00000042881) #22	GPR180 (ENSFCAG00000026347) #23	TGDS (ENSFCAG00000002997) #24	DCT (ENSFCAG00000002994) #25	GPC6 (ENSFCAG00000025920) #26	GPC5 (ENSFCAG00000033514)	SLITRK5 (ENSFCAG00000039523)	SLITRK6 (ENSFCAG00000006736)	SLITRK1 (ENSFCAG00000002455)	SPRY2 (ENSFCAG00000007743)	ENSFCAG00000046985	ENSFCAG00000024879	NDFIP2 (ENSFCAG00000025797)	RBM26 (ENSFCAG00000000561)	OBI1 (ENSFCAG00000032576)	POU4F1 (ENSFCAG00000046488)
Caniformia	ANCESTRAL SPECIES	24	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Canidae	ANCESTRAL SPECIES	38	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00390000017480.g.a	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Canis_lupus	ANCESTRAL SPECIES	35	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000153112.D.h.a.a.a.b	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT01050000244955.a.a	ENSGT00940000153607.c.a.c.a	ENSGT00940000158453.a	ENSGT00940000153431.a.p	ENSGT00940000160718	ENSGT00940000159810	ENSGT00390000017480.g.a	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a
Dog	MODERN SPECIES	14	SLC15A1 (ENSCAFG00845020561) #8	STK24 (ENSCAFG00845020296) #10	FARP1 (ENSCAFG00845020120) #11	IPO5 (ENSCAFG00845019867) #13	ENSCAFG00845019810	RAP2A (ENSCAFG00845019567)	MBNL2 (ENSCAFG00845019234) #14	OXGR1 (ENSCAFG00845019088) #15	ENSCAFG00845010209 #16	ENSCAFG00845009831	UGGT2 (ENSCAFG00845009495) #17	DNAJC3 (ENSCAFG00845009205) #18	DZIP1 (ENSCAFG00845008906) #19	CLDN10 (ENSCAFG00845008850) #20	ABCC4 (ENSCAFG00845008054) #21	SOX21 (ENSCAFG00845007844) #22	GPR180 (ENSCAFG00845007777) #23	TGDS (ENSCAFG00845007622) #24	DCT (ENSCAFG00845007479) #25	ENSCAFG00845007433	GPC6 (ENSCAFG00845007327) #26	ENSCAFG00845007227	ENSCAFG00845007169	ENSCAFG00845006956	ENSCAFG00845006931	SLITRK5 (ENSCAFG00845006790)	ENSCAFG00845006620	ENSCAFG00845006596	ENSCAFG00845006574	ENSCAFG00845006551	SLITRK1 (ENSCAFG00845006513)
Dingo	MODERN SPECIES	337	STK24 (ENSCAFG00020022957) #10	ENSCAFG00020022959	FARP1 (ENSCAFG00020023059) #11	IPO5 (ENSCAFG00020023850) #13	ENSCAFG00020023857	RAP2A (ENSCAFG00020023866)	MBNL2 (ENSCAFG00020023874) #14	OXGR1 (ENSCAFG00020023879) #15	ENSCAFG00020023881 #16	ENSCAFG00020023883	UGGT2 (ENSCAFG00020023894) #17	DNAJC3 (ENSCAFG00020023929) #18	DZIP1 (ENSCAFG00020023938) #19	CLDN10 (ENSCAFG00020023943) #20	ABCC4 (ENSCAFG00020023951) #21	SOX21 (ENSCAFG00020024003) #22	GPR180 (ENSCAFG00020024004) #23	ENSCAFG00020024005 #24	ENSCAFG00020024006 #26	ENSCAFG00020024009 #26	ENSCAFG00020024011 ##26	GPC5 (ENSCAFG00020024017)	ENSCAFG00020024028	ENSCAFG00020024030	SLITRK5 (ENSCAFG00020024036)	ENSCAFG00020024038	ENSCAFG00020024040	ENSCAFG00020024043	ENSCAFG00020024045	SLITRK6 (ENSCAFG00020024048)	ENSCAFG00020024049
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b.f	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Ursidae	ANCESTRAL SPECIES	27	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00900000143726	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.l #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000159517.n	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b.f	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Giant Panda	MODERN SPECIES	17	UBAC2 (ENSAMEG00000004405)	DOCK9 (ENSAMEG00000004142) #7	STK24 (ENSAMEG00000003961) #10	FARP1 (ENSAMEG00000003908) #11	IPO5 (ENSAMEG00000003784) #13	RAP2A (ENSAMEG00000023623)	MBNL2 (ENSAMEG00000003725) #14	OXGR1 (ENSAMEG00000020117) #15	ENSAMEG00000026790	HS6ST3 (ENSAMEG00000020116) #16	UGGT2 (ENSAMEG00000010385) #17	DNAJC3 (ENSAMEG00000010329) #18	DZIP1 (ENSAMEG00000010296) #19	CLDN10 (ENSAMEG00000010283) #20	ABCC4 (ENSAMEG00000010239) #21	SOX21 (ENSAMEG00000010234) #22	GPR180 (ENSAMEG00000010215) #23	TGDS (ENSAMEG00000010181) #24	DCT (ENSAMEG00000010142) #25	GPC6 (ENSAMEG00000010136) #26	GPC5 (ENSAMEG00000017157)	SLITRK5 (ENSAMEG00000026892)	ENSAMEG00000031163	SLITRK6 (ENSAMEG00000018771)	SLITRK1 (ENSAMEG00000018959)	ENSAMEG00000018926	ENSAMEG00000030067	SPRY2 (ENSAMEG00000002530)	NDFIP2 (ENSAMEG00000002504)	RBM26 (ENSAMEG00000002458)	OBI1 (ENSAMEG00000002446)
Mustelinae	ANCESTRAL SPECIES	75	ENSGT00960000187430	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a
Ferret	MODERN SPECIES	179	DOCK9 (ENSMPUG00000011418) #7	SLC15A1 (ENSMPUG00000011439) #8	STK24 (ENSMPUG00000011586) #10	FARP1 (ENSMPUG00000011591) #11	IPO5 (ENSMPUG00000011735) #13	ENSMPUG00000011742	RAP2A (ENSMPUG00000011746)	MBNL2 (ENSMPUG00000011750) #14	OXGR1 (ENSMPUG00000019077) #15	ENSMPUG00000011757	UGGT2 (ENSMPUG00000011759) #17	DNAJC3 (ENSMPUG00000011781) #18	DZIP1 (ENSMPUG00000011789) #19	CLDN10 (ENSMPUG00000011805) #20	ABCC4 (ENSMPUG00000011812) #21	SOX21 (ENSMPUG00000011830) #22	GPR180 (ENSMPUG00000011836) #23	ENSMPUG00000011845	TGDS (ENSMPUG00000011849) #24	DCT (ENSMPUG00000011856) #25	ENSMPUG00000011863 #26	ENSMPUG00000011866 #26	ENSMPUG00000011871	ENSMPUG00000011872	ENSMPUG00000011876	ENSMPUG00000011879	ENSMPUG00000011882
American mink	MODERN SPECIES	127	SLC15A1 (ENSNVIG00000017233) #8	STK24 (ENSNVIG00000017194) #10	FARP1 (ENSNVIG00000017085) #11	IPO5 (ENSNVIG00000016981) #13	RAP2A (ENSNVIG00000016973)	MBNL2 (ENSNVIG00000016918) #14	OXGR1 (ENSNVIG00000016883) #15	ENSNVIG00000016875	ENSNVIG00000016860	HS6ST3 (ENSNVIG00000016837) #16	UGGT2 (ENSNVIG00000016680) #17	DNAJC3 (ENSNVIG00000016631) #18	DZIP1 (ENSNVIG00000016404) #19	ENSNVIG00000016387 #20	ABCC4 (ENSNVIG00000016221) #21	SOX21 (ENSNVIG00000016192) #22	GPR180 (ENSNVIG00000016173) #23	TGDS (ENSNVIG00000016163) #24	DCT (ENSNVIG00000016125) #25	GPC6 (ENSNVIG00000016085) #26	GPC5 (ENSNVIG00000016042)
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Equus	ANCESTRAL SPECIES	26	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00900000143249	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT00940000165227
Horse	MODERN SPECIES	8	SLC15A1 (ENSECAG00000009334) #8	STK24 (ENSECAG00000007682) #10	FARP1 (ENSECAG00000015331) #11	IPO5 (ENSECAG00000014808) #13	RAP2A (ENSECAG00000033905)	MBNL2 (ENSECAG00000020574) #14	OXGR1 (ENSECAG00000003078) #15	HS6ST3 (ENSECAG00000003050) #16	ENSECAG00000050970	UGGT2 (ENSECAG00000020303) #17	DNAJC3 (ENSECAG00000009335) #18	DZIP1 (ENSECAG00000021423) #19	CLDN10 (ENSECAG00000026997) #20	ABCC4 (ENSECAG00000017168) #21	ENSECAG00000059057	SOX21 (ENSECAG00000032014) #22	ENSECAG00000050444	GPR180 (ENSECAG00000011085) #23	TGDS (ENSECAG00000021307) #24	DCT (ENSECAG00000000264) #25	ENSECAG00000047668	GPC6 (ENSECAG00000000234) #26	GPC5 (ENSECAG00000019744)	ENSECAG00000003783	ENSECAG00000046134	ENSECAG00000015097	SLITRK5 (ENSECAG00000035050)	SLITRK6 (ENSECAG00000013429)	ENSECAG00000046745	ENSECAG00000046569	ENSECAG00000038376
Donkey	MODERN SPECIES	2	DOCK9 (ENSEASG00005022217) #7	ENSEASG00005032081	SLC15A1 (ENSEASG00005022231) #8	STK24 (ENSEASG00005022232) #10	FARP1 (ENSEASG00005022234) #11	IPO5 (ENSEASG00005022238) #13	ENSEASG00005022243	MBNL2 (ENSEASG00005022245) #14	OXGR1 (ENSEASG00005022252) #15	HS6ST3 (ENSEASG00005022254) #16	UGGT2 (ENSEASG00005022262) #17	DNAJC3 (ENSEASG00005013568) #18	DZIP1 (ENSEASG00005013579) #19	CLDN10 (ENSEASG00005013591) #20	ABCC4 (ENSEASG00005013595) #21	SOX21 (ENSEASG00005028849) #22	GPR180 (ENSEASG00005013616) #23	TGDS (ENSEASG00005013622) #24	DCT (ENSEASG00005013629) #25	GPC6 (ENSEASG00005031606) #26	GPC5 (ENSEASG00005013649)	SLITRK5 (ENSEASG00005013676)	SLITRK6 (ENSEASG00005013685)	SLITRK1 (ENSEASG00005037576)	ENSEASG00005038495	SPRY2 (ENSEASG00005036785)	NDFIP2 (ENSEASG00005013692)	RBM26 (ENSEASG00005013694)	OBI1 (ENSEASG00005013701)	POU4F1 (ENSEASG00005013704)	ENSEASG00005013710
Chiroptera	ANCESTRAL SPECIES	39	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Microchiroptera	ANCESTRAL SPECIES	40	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Greater horseshoe bat	MODERN SPECIES	22	DOCK9 (ENSRFEG00010005578) #7	SLC15A1 (ENSRFEG00010005351) #8	STK24 (ENSRFEG00010005302) #10	FARP1 (ENSRFEG00010005253) #11	IPO5 (ENSRFEG00010005192) #13	RAP2A (ENSRFEG00010005161)	MBNL2 (ENSRFEG00010005128) #14	OXGR1 (ENSRFEG00010005094) #15	ENSRFEG00010005088	HS6ST3 (ENSRFEG00010005080) #16	UGGT2 (ENSRFEG00010005051) #17	DNAJC3 (ENSRFEG00010005010) #18	DZIP1 (ENSRFEG00010004969) #19	CLDN10 (ENSRFEG00010004944) #20	ABCC4 (ENSRFEG00010004860) #21	SOX21 (ENSRFEG00010004770) #22	GPR180 (ENSRFEG00010004750) #23	TGDS (ENSRFEG00010004735) #24	DCT (ENSRFEG00010004716) #25	ENSRFEG00010004699	GPC6 (ENSRFEG00010004685) #26	ENSRFEG00010004668	ENSRFEG00010004660	GPC5 (ENSRFEG00010004648)	SLITRK5 (ENSRFEG00010004596)	SLITRK6 (ENSRFEG00010004592)	ENSRFEG00010004584	SLITRK1 (ENSRFEG00010004570)	ENSRFEG00010004556	SPRY2 (ENSRFEG00010004554)	NDFIP2 (ENSRFEG00010004534)
Atlantogenata	ANCESTRAL SPECIES	89		ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Xenarthra	ANCESTRAL SPECIES	478													ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.r #26	ENSGT01050000244897.a.b.b.b.q #26	ENSGT01050000244955.a.a
Armadillo	MODERN SPECIES	1495													DZIP1 (ENSDNOG00000015097) #19	CLDN10 (ENSDNOG00000015086) #20	ABCC4 (ENSDNOG00000000948) #21	ENSDNOG00000044507 #22	GPR180 (ENSDNOG00000011626) #23	TGDS (ENSDNOG00000034685) #24	DCT (ENSDNOG00000001499) #25	ENSDNOG00000031441 #26	ENSDNOG00000045801	ENSDNOG00000019770	ENSDNOG00000012557 #26	ENSDNOG00000030828	GPC5 (ENSDNOG00000044239)	ENSDNOG00000037654	ENSDNOG00000046088
Sloth	MODERN SPECIES	13630																SOX21 (ENSCHOG00000012015) #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b.d	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Diprotodontia	ANCESTRAL SPECIES	77	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a
Wallaby	MODERN SPECIES	12428																ENSMEUG00000004068 #22
Diprotodontia_a	ANCESTRAL SPECIES	71	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b.o #17	ENSGT00390000004600.b.b.p #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000156178.A.db	ENSGT00950000182802.B.a.b	ENSGT00940000160718
Common wonbat	MODERN SPECIES	695								HS6ST3 (ENSVURG00010023837) #16	UGGT2 (ENSVURG00010023840) #17	ENSVURG00010023846	DNAJC3 (ENSVURG00010023847) #18	DZIP1 (ENSVURG00010023850) #19	CLDN10 (ENSVURG00010023858) #20	ENSVURG00010023861	ABCC4 (ENSVURG00010023864) #21	SOX21 (ENSVURG00010023875) #22	GPR180 (ENSVURG00010023877) #23	DCT (ENSVURG00010023878) #25	GPC6 (ENSVURG00010023883) #26	ENSVURG00010023888	ENSVURG00010023899	ENSVURG00010023901	ENSVURG00010023902	SLITRK5 (ENSVURG00010023907)	ENSVURG00010023908	ENSVURG00010023910	ENSVURG00010023911	SLITRK6 (ENSVURG00010023913)	ENSVURG00010023917	ENSVURG00010023918	ENSVURG00010023919
koala	MODERN SPECIES	162											ENSPCIG00000034994 #17	DNAJC3 (ENSPCIG00000027321) #18	DZIP1 (ENSPCIG00000016214) #19	CLDN10 (ENSPCIG00000016212) #20	ABCC4 (ENSPCIG00000030273) #21	SOX21 (ENSPCIG00000007896) #22	ENSPCIG00000007893	ENSPCIG00000007890	GPR180 (ENSPCIG00000007885) #23	TGDS (ENSPCIG00000007656) #24	DCT (ENSPCIG00000006281) #25	GPC6 (ENSPCIG00000006271) #26	ENSPCIG00000023304	ENSPCIG00000035271	ENSPCIG00000023303	ENSPCIG00000023302
Tasmanian devil	MODERN SPECIES	2	STK24 (ENSSHAG00000005658) #10	FARP1 (ENSSHAG00000006876) #11	IPO5 (ENSSHAG00000001752) #13	ENSSHAG00000005252	RAP2A (ENSSHAG00000025897)	MBNL2 (ENSSHAG00000010745) #14	OXGR1 (ENSSHAG00000000329) #15	ENSSHAG00000024804 #16	ENSSHAG00000011305 #16	UGGT2 (ENSSHAG00000012007) #17	DNAJC3 (ENSSHAG00000013096) #18	DZIP1 (ENSSHAG00000013699) #19	ENSSHAG00000025412 #20	ENSSHAG00000014015 #20	ABCC4 (ENSSHAG00000015258) #21	SOX21 (ENSSHAG00000022050) #22	GPR180 (ENSSHAG00000016891) #23	TGDS (ENSSHAG00000016980) #24	DCT (ENSSHAG00000017147) #25	GPC6 (ENSSHAG00000022631) #26	GPC5 (ENSSHAG00000029916)	ENSSHAG00000022741	ENSSHAG00000021306	SLITRK5 (ENSSHAG00000009199)	SLITRK6 (ENSSHAG00000030008)	ENSSHAG00000029151	ENSSHAG00000021875	ENSSHAG00000003252	ENSSHAG00000031516	ENSSHAG00000023879	ENSSHAG00000026963
Platypus	MODERN SPECIES	1	ENSOANG00000011318	METTL21EP (ENSOANG00000049162)	SLC10A2 (ENSOANG00000011322)	ENSOANG00000044905	EFNB2 (ENSOANG00000043985)	ARGLU1 (ENSOANG00000048612)	ENSOANG00000042125	MBNL2 (ENSOANG00000014911) #14	ENSOANG00000037903 #16	ENSOANG00000045319 #16	UGGT2 (ENSOANG00000014914) #17	DNAJC3 (ENSOANG00000014915) #18	DZIP1 (ENSOANG00000014916) #19	CLDN10 (ENSOANG00000042413) #20	ABCC4 (ENSOANG00000014917) #21	SOX21 (ENSOANG00000040594) #22	GPR180 (ENSOANG00000014919) #23	TGDS (ENSOANG00000014920) #24	DCT (ENSOANG00000014922) #25	ENSOANG00000014923 #26	GPC5 (ENSOANG00000014924)	SLITRK5 (ENSOANG00000048743)	SLITRK6 (ENSOANG00000016038)	ENSOANG00000031133	SLITRK1 (ENSOANG00000044719)	SPRY2 (ENSOANG00000004665)	NDFIP2 (ENSOANG00000029384)	RBM26 (ENSOANG00000001531)	OBI1 (ENSOANG00000008745)	POU4F1 (ENSOANG00000042377)	EDNRB (ENSOANG00000004763)
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Archelosauria	ANCESTRAL SPECIES		ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00990000214266	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00990000214266	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Goode s thornscrub tortoise	MODERN SPECIES		STK24 (ENSGEVG00005004501) #10	FARP1 (ENSGEVG00005004256) #11	IPO5 (ENSGEVG00005004126) #13	RAP2A (ENSGEVG00005004095)	MBNL2 (ENSGEVG00005004079) #14	ENSGEVG00005004065 #15	ENSGEVG00005004055 #15	HS6ST3 (ENSGEVG00005004045) #16	ENSGEVG00005004041 #16	UGGT2 (ENSGEVG00005003801) #17	DNAJC3 (ENSGEVG00005003644) #18	DZIP1 (ENSGEVG00005003625) #19	ENSGEVG00005003617 #20	ENSGEVG00005003611 #20	ABCC4 (ENSGEVG00005002805) #21	SOX21 (ENSGEVG00005002448) #22	GPR180 (ENSGEVG00005002432) #23	TGDS (ENSGEVG00005002411) #24	DCT (ENSGEVG00005002389) #25	GPC6 (ENSGEVG00005002375) #26	GPC5 (ENSGEVG00005002333)	SLITRK5 (ENSGEVG00005002303)	SLITRK6 (ENSGEVG00005002296)	SLITRK1 (ENSGEVG00005002289)	ENSGEVG00005002280	SPRY2 (ENSGEVG00005002277)	ENSGEVG00005002266	NDFIP2 (ENSGEVG00005002260)	RBM26 (ENSGEVG00005002237)	OBI1 (ENSGEVG00005002224)	POU4F1 (ENSGEVG00005002211)
Abingdon island giant tortoise	MODERN SPECIES	1129															ABCC4 (ENSCABG00000010833) #21	SOX21 (ENSCABG00000010871) #22	GPR180 (ENSCABG00000010876) #23	TGDS (ENSCABG00000010889) #24	DCT (ENSCABG00000010894) #25	GPC6 (ENSCABG00000010898) #26
Emydidae	ANCESTRAL SPECIES	30	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00990000214266	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Three-toed box turtle	MODERN SPECIES	4	STK24 (ENSTMTG00000021745) #10	FARP1 (ENSTMTG00000021725) #11	IPO5 (ENSTMTG00000021708) #13	RAP2A (ENSTMTG00000021705)	MBNL2 (ENSTMTG00000021692) #14	ENSTMTG00000021688 #15	ENSTMTG00000021685 #15	HS6ST3 (ENSTMTG00000021680) #16	ENSTMTG00000021678 #16	UGGT2 (ENSTMTG00000021175) #17	DNAJC3 (ENSTMTG00000021059) #18	DZIP1 (ENSTMTG00000021041) #19	ENSTMTG00000021035 #20	ENSTMTG00000021033 #20	ABCC4 (ENSTMTG00000020943) #21	SOX21 (ENSTMTG00000020923) #22	GPR180 (ENSTMTG00000020920) #23	TGDS (ENSTMTG00000020911) #24	DCT (ENSTMTG00000020874) #25	GPC6 (ENSTMTG00000020865) #26	GPC5 (ENSTMTG00000020846)	SLITRK5 (ENSTMTG00000020822)	SLITRK6 (ENSTMTG00000020819)	SLITRK1 (ENSTMTG00000020817)	SPRY2 (ENSTMTG00000020812)	ENSTMTG00000020803	NDFIP2 (ENSTMTG00000020791)	RBM26 (ENSTMTG00000020771)	OBI1 (ENSTMTG00000020761)	POU4F1 (ENSTMTG00000020754)	EDNRB (ENSTMTG00000020746)
Archosauria	ANCESTRAL SPECIES	2	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT01080000257332.A.a.b	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Aves	ANCESTRAL SPECIES		ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Neognathae	ANCESTRAL SPECIES	1	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.y.a #26	ENSGT01050000244897.a.b.b.b.y.b #26	ENSGT01050000244897.a.b.b.b.z #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT01080000257332.A.a.b	ENSGT00390000013512
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.y.a #26	ENSGT01050000244897.a.b.b.b.y.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT01080000257332.A.a.b.b	ENSGT00390000013512	ENSGT00940000162154
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.l #19	ENSGT00940000156862.k.b #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A.p #23	ENSGT00940000159196 #24	ENSGT00940000156856.j #25	ENSGT01050000244897.a.b.b.b.y.a #26	ENSGT01050000244955.a.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862.l #19	ENSGT00940000156862.k.b #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A.p #23	ENSGT00940000159196 #24	ENSGT00940000156856.j #25	ENSGT01050000244897.a.b.b.b.y.a #26	ENSGT01050000244955.a.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Chicken	MODERN SPECIES		SLC15A1 (ENSGALG00010005851) #8	STK24 (ENSGALG00010005872) #10	ENSGALG00010005959	FARP1 (ENSGALG00010005991) #11	IPO5 (ENSGALG00010006010) #13	RAP2A (ENSGALG00010005237)	MBNL2 (ENSGALG00010005272) #14	ENSGALG00010005284 #15	ENSGALG00010005289 #15	HS6ST3 (ENSGALG00010005321) #16	UGGT2 (ENSGALG00010005341) #17	DNAJC3 (ENSGALG00010005356) #18	DZIP1 (ENSGALG00010005379) #19	CLDN10 (ENSGALG00010005387) #20	ABCC4 (ENSGALG00010005402) #21	SOX21 (ENSGALG00010006075) #22	GPR180 (ENSGALG00010005438) #23	TGDS (ENSGALG00010005460) #24	DCT (ENSGALG00010005140) #25	GPC6 (ENSGALG00010005163) #26	GPC5 (ENSGALG00010005433)	ENSGALG00010005882	SLITRK5 (ENSGALG00010005885)	ENSGALG00010005901	SLITRK6 (ENSGALG00010005934)	SLITRK1 (ENSGALG00010005949)	ENSGALG00010006079	SPRY2 (ENSGALG00010000711)	NDFIP2 (ENSGALG00010000717)	RBM26 (ENSGALG00010000720)	OBI1 (ENSGALG00010000724)
Japanese quail	MODERN SPECIES		ENSCJPG00005019393	STK24 (ENSCJPG00005019394) #10	FARP1 (ENSCJPG00005019395) #11	IPO5 (ENSCJPG00005019396) #13	RAP2A (ENSCJPG00005019400)	MBNL2 (ENSCJPG00005019402) #14	ENSCJPG00005019405 #15	ENSCJPG00005019407 #15	HS6ST3 (ENSCJPG00005019409) #16	ENSCJPG00005019412 #16	UGGT2 (ENSCJPG00005019413) #17	DNAJC3 (ENSCJPG00005019416) #18	ENSCJPG00005019417 #19	CLDN10 (ENSCJPG00005019418) #20	ABCC4 (ENSCJPG00005019419) #21	SOX21 (ENSCJPG00005019421) #22	GPR180 (ENSCJPG00005019422) #23	TGDS (ENSCJPG00005019423) #24	DCT (ENSCJPG00005019425) #25	GPC6 (ENSCJPG00005019426) #26	GPC5 (ENSCJPG00005019430)	ENSCJPG00005019438	ENSCJPG00005019439	SLITRK5 (ENSCJPG00005019441)	ENSCJPG00005019442	SLITRK6 (ENSCJPG00005019443)	SLITRK1 (ENSCJPG00005019448)	SPRY2 (ENSCJPG00005019453)	NDFIP2 (ENSCJPG00005019457)	RBM26 (ENSCJPG00005019458)	OBI1 (ENSCJPG00005019463)
Anatidae	ANCESTRAL SPECIES	35	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.y.a #26	ENSGT01050000244897.a.b.b.b.y.b #26	ENSGT01050000244955.a.a	ENSGT01030000234722.a.a.a.b.a.a.a
Pink-footed goose	MODERN SPECIES	27	STK24 (ENSABRG00000017137) #10	FARP1 (ENSABRG00000017116) #11	IPO5 (ENSABRG00000017082) #13	RAP2A (ENSABRG00000017055)	MBNL2 (ENSABRG00000017013) #14	ENSABRG00000016990 #15	ENSABRG00000016977 #15	ENSABRG00000016967 #16	ENSABRG00000016927 #16	UGGT2 (ENSABRG00000016871) #17	DNAJC3 (ENSABRG00000016831) #18	DZIP1 (ENSABRG00000016794) #19	ENSABRG00000016774	CLDN10 (ENSABRG00000016759) #20	ABCC4 (ENSABRG00000016715) #21	SOX21 (ENSABRG00000016690) #22	GPR180 (ENSABRG00000016679) #23	TGDS (ENSABRG00000016670) #24	DCT (ENSABRG00000016656) #25	ENSABRG00000016650 #26	ENSABRG00000016640 #26	GPC5 (ENSABRG00000016601)	ENSABRG00000016536
Duck	MODERN SPECIES	4035																SOX21 (ENSAPLG00000021180) #22
Neognathae_b	ANCESTRAL SPECIES		ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.z #26	ENSGT01050000244897.a.b.b.b.y.a #26	ENSGT01050000244897.a.b.b.b.y.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.y.a #26	ENSGT01050000244897.a.b.b.b.y.b #26	ENSGT01050000244897.a.b.b.b.z #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154
Kakapo	MODERN SPECIES	11	DOCK9 (ENSSHBG00005008018) #7	SLC15A1 (ENSSHBG00005009441) #8	STK24 (ENSSHBG00005009509) #10	FARP1 (ENSSHBG00005009529) #11	IPO5 (ENSSHBG00005009562) #13	RAP2A (ENSSHBG00005009573)	MBNL2 (ENSSHBG00005009588) #14	ENSSHBG00005009621 #15	ENSSHBG00005009633 #15	HS6ST3 (ENSSHBG00005009641) #16	UGGT2 (ENSSHBG00005009693) #17	DNAJC3 (ENSSHBG00005009949) #18	DZIP1 (ENSSHBG00005010038) #19	CLDN10 (ENSSHBG00005010124) #20	ABCC4 (ENSSHBG00005010168) #21	SOX21 (ENSSHBG00005010229) #22	GPR180 (ENSSHBG00005010264) #23	ENSSHBG00005010287	DCT (ENSSHBG00005010307) #25	GPC6 (ENSSHBG00005010362) #26	GPC5 (ENSSHBG00005010499)	ENSSHBG00005010580	ENSSHBG00005010619	SLITRK5 (ENSSHBG00005010648)	SLITRK6 (ENSSHBG00005010677)	SLITRK1 (ENSSHBG00005010704)	SPRY2 (ENSSHBG00005010724)	NDFIP2 (ENSSHBG00005010754)	RBM26 (ENSSHBG00005010808)	OBI1 (ENSSHBG00005010909)	POU4F1 (ENSSHBG00005010941)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.z #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Great tit	MODERN SPECIES		GPR18 (ENSPMJG00000002746)	DOCK9 (ENSPMJG00000002943) #7	SLC15A1 (ENSPMJG00000012074) #8	STK24 (ENSPMJG00000012076) #10	FARP1 (ENSPMJG00000012077) #11	IPO5 (ENSPMJG00000012078) #13	RAP2A (ENSPMJG00000013117)	MBNL2 (ENSPMJG00000013118) #14	OXGR1 (ENSPMJG00000013119) #15	HS6ST3 (ENSPMJG00000013120) #16	UGGT2 (ENSPMJG00000013121) #17	DNAJC3 (ENSPMJG00000013126) #18	DZIP1 (ENSPMJG00000013127) #19	CLDN10 (ENSPMJG00000013128) #20	ABCC4 (ENSPMJG00000013136) #21	SOX21 (ENSPMJG00000013140) #22	GPR180 (ENSPMJG00000013142) #23	TGDS (ENSPMJG00000013143) #24	DCT (ENSPMJG00000013144) #25	GPC6 (ENSPMJG00000013146) #26	GPC5 (ENSPMJG00000013149)	SLITRK5 (ENSPMJG00000013159)	SLITRK6 (ENSPMJG00000013163)	SLITRK1 (ENSPMJG00000013173)	SPRY2 (ENSPMJG00000013180)	NDFIP2 (ENSPMJG00000013190)	RBM26 (ENSPMJG00000013194)	OBI1 (ENSPMJG00000013206)	POU4F1 (ENSPMJG00000013207)	EDNRB (ENSPMJG00000013209)	SLAIN1 (ENSPMJG00000013210)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.z #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.z #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Passeroidea	ANCESTRAL SPECIES	10	ENSGT00950000182999.b.b	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b.z #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a
Zebra finch	MODERN SPECIES		UBAC2 (ENSTGUG00000010963)	DOCK9 (ENSTGUG00000010967) #7	SLC15A1 (ENSTGUG00000011018) #8	STK24 (ENSTGUG00000011049) #10	FARP1 (ENSTGUG00000011061) #11	IPO5 (ENSTGUG00000011084) #13	MBNL2 (ENSTGUG00000011104) #14	OXGR1 (ENSTGUG00000011118) #15	HS6ST3 (ENSTGUG00000011121) #16	ENSTGUG00000011122 #16	UGGT2 (ENSTGUG00000011123) #17	DNAJC3 (ENSTGUG00000011161) #18	DZIP1 (ENSTGUG00000011173) #19	CLDN10 (ENSTGUG00000011177) #20	ABCC4 (ENSTGUG00000011178) #21	SOX21 (ENSTGUG00000011206) #22	GPR180 (ENSTGUG00000011209) #23	TGDS (ENSTGUG00000011214) #24	DCT (ENSTGUG00000011227) #25	GPC6 (ENSTGUG00000011232) #26	GPC5 (ENSTGUG00000011238)	SLITRK5 (ENSTGUG00000029657)	ENSTGUG00000023389	RDX (ENSTGUG00000011248)	FDX1 (ENSTGUG00000011262)	ARHGAP20 (ENSTGUG00000011265)	RNF17 (ENSTGUG00000011267)	CENPJ (ENSTGUG00000011290)	PSPC1 (ENSTGUG00000011295)	ZMYM2 (ENSTGUG00000011309)	GJA3 (ENSTGUG00000011312)
Flycatcher	MODERN SPECIES		DOCK9 (ENSFALG00000004363) #7	SLC15A1 (ENSFALG00000004383) #8	STK24 (ENSFALG00000027199) #10	FARP1 (ENSFALG00000004405) #11	IPO5 (ENSFALG00000004414) #13	RAP2A (ENSFALG00000023879)	MBNL2 (ENSFALG00000025244) #14	OXGR1 (ENSFALG00000015179) #15	HS6ST3 (ENSFALG00000015194) #16	ENSFALG00000023712 #16	UGGT2 (ENSFALG00000004455) #17	DNAJC3 (ENSFALG00000004465) #18	DZIP1 (ENSFALG00000004477) #19	CLDN10 (ENSFALG00000028403) #20	ABCC4 (ENSFALG00000004486) #21	SOX21 (ENSFALG00000015205) #22	GPR180 (ENSFALG00000004490) #23	TGDS (ENSFALG00000004497) #24	DCT (ENSFALG00000004505) #25	ENSFALG00000004537 #26	ENSFALG00000026484 #26	GPC5 (ENSFALG00000004547)	ENSFALG00000025660	SLITRK5 (ENSFALG00000013408)	SLITRK6 (ENSFALG00000014684)	SLITRK1 (ENSFALG00000014705)	ENSFALG00000026210	SPRY2 (ENSFALG00000014733)	NDFIP2 (ENSFALG00000026200)	RBM26 (ENSFALG00000000769)	OBI1 (ENSFALG00000000776)
Lepidosauria	ANCESTRAL SPECIES	40					ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000159395	ENSGT00940000155756	ENSGT00530000063872.B	ENSGT00390000017860.a.b	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT00940000158453.a	ENSGT00390000008063	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00730000112498
Laterata	ANCESTRAL SPECIES		ENSGT00390000010065	ENSGT00940000159395	ENSGT00940000155756	ENSGT00530000063872.B	ENSGT00390000017860.a.b	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT00940000158453.a	ENSGT00390000008063	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00730000112498
Common wall lizard	MODERN SPECIES	12	MYCBP2 (ENSPMRG00000006665)	SLAIN1 (ENSPMRG00000006406)	RAP2A (ENSPMRG00000006401)	MBNL2 (ENSPMRG00000006387) #14	ENSPMRG00000006380 #15	ENSPMRG00000006378 #15	HS6ST3 (ENSPMRG00000006375) #16	ENSPMRG00000006369	UGGT2 (ENSPMRG00000005134) #17	DNAJC3 (ENSPMRG00000004982) #18	ENSPMRG00000004972 #19	CLDN10 (ENSPMRG00000004967) #20	ENSPMRG00000004966 #21	ENSPMRG00000004957	ENSPMRG00000004734 #21	SOX21 (ENSPMRG00000004690) #22	GPR180 (ENSPMRG00000004680) #23	TGDS (ENSPMRG00000004646) #24	ENSPMRG00000004634	DCT (ENSPMRG00000004630) #25	ENSPMRG00000004624	GPC6 (ENSPMRG00000004615) #26	ENSPMRG00000004603	ENSPMRG00000004601	ENSPMRG00000004596	ENSPMRG00000004594	SLITRK5 (ENSPMRG00000004593)	ENSPMRG00000004590	ENSPMRG00000004588	ENSPMRG00000004582	DHPS (ENSPMRG00000004567)
Argentine black and white tegu	MODERN SPECIES	23	FBXL3 (ENSSMRG00000017547)	MYCBP2 (ENSSMRG00000017514)	SCEL (ENSSMRG00000017509)	SLAIN1 (ENSSMRG00000017500)	RAP2A (ENSSMRG00000017499)	MBNL2 (ENSSMRG00000017495) #14	ENSSMRG00000017490 #15	ENSSMRG00000017489 #15	HS6ST3 (ENSSMRG00000017487) #16	UGGT2 (ENSSMRG00000017482) #17	DNAJC3 (ENSSMRG00000017480) #18	DZIP1 (ENSSMRG00000017478) #19	CLDN10 (ENSSMRG00000017477) #20	ABCC4 (ENSSMRG00000016275) #21	ENSSMRG00000016274	SOX21 (ENSSMRG00000016272) #22	GPR180 (ENSSMRG00000016269) #23	TGDS (ENSSMRG00000016268) #24	DCT (ENSSMRG00000016267) #25	GPC6 (ENSSMRG00000016266) #26	ENSSMRG00000016264	ENSSMRG00000016258	SLITRK5 (ENSSMRG00000016254)	ENSSMRG00000016253	DHPS (ENSSMRG00000016252)	SLITRK6 (ENSSMRG00000016251)	ENSSMRG00000016249	SLITRK1 (ENSSMRG00000016247)	ENSSMRG00000016246	ENSSMRG00000016244	SPRY2 (ENSSMRG00000016242)
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00390000010065	ENSGT00940000159395	ENSGT00940000155756	ENSGT00390000017860.a.b	ENSGT00940000160594	ENSGT00950000182897.B.b ##14	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F.a #15	ENSGT01030000234621.F.b #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT00940000158453.a	ENSGT00390000008063	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00730000112498
Elapidae	ANCESTRAL SPECIES	13	ENSGT00940000156596	ENSGT00940000158318	ENSGT00510000048601.a	ENSGT01100000263512.a.a.a.b.c	ENSGT00940000153997.b.a.a	ENSGT00940000155716	ENSGT00500000045231	ENSGT00390000017860.a.b	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b.c #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT00940000158453.a	ENSGT00980000199516	ENSGT00390000008063	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT00940000155756
Indian cobra	MODERN SPECIES	5	ENSNNAG00000003181	ENSNNAG00000003193	ZFAND4 (ENSNNAG00000003207)	CFAP99 (ENSNNAG00000003229)	ENSNNAG00000003259	RAP2A (ENSNNAG00000003276)	ENSNNAG00000003284	MBNL2 (ENSNNAG00000003334) #14	UGGT2 (ENSNNAG00000003487) #17	DNAJC3 (ENSNNAG00000003617) #18	ENSNNAG00000003683	ENSNNAG00000003703 #19	CLDN10 (ENSNNAG00000003753) #20	ABCC4 (ENSNNAG00000003809) #21	ENSNNAG00000004009	SOX21 (ENSNNAG00000004030) #22	GPR180 (ENSNNAG00000004064) #23	TGDS (ENSNNAG00000004254) #24	DCT (ENSNNAG00000004324) #25	GPC6 (ENSNNAG00000004682) #26	ENSNNAG00000004756	ENSNNAG00000004772	SLITRK5 (ENSNNAG00000004814)	ENSNNAG00000005177	DHPS (ENSNNAG00000005190)	SLITRK6 (ENSNNAG00000005214)	ENSNNAG00000005238	SLITRK1 (ENSNNAG00000005248)	SPRY2 (ENSNNAG00000005255)	NDFIP2 (ENSNNAG00000005276)	RBM26 (ENSNNAG00000005338)
Elapidae_a	ANCESTRAL SPECIES	16	ENSGT00940000156596	ENSGT00940000158318	ENSGT00510000048601.a	ENSGT01100000263512.a.a.a.b.c	ENSGT00940000153997.b.a.a	ENSGT00940000155716	ENSGT00500000045231	ENSGT00390000017860.a.b	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b.c #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856.n #25	ENSGT00940000156856.m #25	ENSGT01050000244897.a.b.b.b #26	ENSGT00940000158453.a	ENSGT00980000199516	ENSGT00390000008063	ENSGT00940000160718
Acanthophiinae	ANCESTRAL SPECIES	62	ENSGT00940000156596	ENSGT00940000158318	ENSGT00510000048601.a	ENSGT01100000263512.a.a.a.b.c	ENSGT00940000153997.b.a.a	ENSGT00940000155716	ENSGT00500000045231	ENSGT00390000017860.a.b	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232 #20	ENSGT00940000153931.b.c #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856.n #25	ENSGT00940000156856.m #25	ENSGT01050000244897.a.b.b.b #26	ENSGT00940000158453.a	ENSGT00980000199516	ENSGT00390000008063	ENSGT00940000160718
Mainland tiger snake	MODERN SPECIES	25	METTL21C (ENSNSUG00000009119)	POGLUT2 (ENSNSUG00000009121)	BIVM (ENSNSUG00000009216)	EDNRB (ENSNSUG00000009217)	ENSNSUG00000009248	ZFAND4 (ENSNSUG00000009251)	ENSNSUG00000009252	SLAIN1 (ENSNSUG00000009254)	RAP2A (ENSNSUG00000009257)	MBNL2 (ENSNSUG00000009258) #14	UGGT2 (ENSNSUG00000009268) #17	DNAJC3 (ENSNSUG00000010303) #18	ENSNSUG00000010304 #19	CLDN10 (ENSNSUG00000010305) #20	ABCC4 (ENSNSUG00000010307) #21	SOX21 (ENSNSUG00000010434) #22	GPR180 (ENSNSUG00000010436) #23	TGDS (ENSNSUG00000010486) #24	ENSNSUG00000010489 #25	ENSNSUG00000010510 #25	ENSNSUG00000010540 #26	ENSNSUG00000010553 #26	ENSNSUG00000010567	SLITRK5 (ENSNSUG00000010568)	ENSNSUG00000010570	DHPS (ENSNSUG00000010571)	SLITRK6 (ENSNSUG00000010574)
Eastern brown snake	MODERN SPECIES	39	BIVM (ENSPTXG00000008616)	EDNRB (ENSPTXG00000008615)	ENSPTXG00000008613	ZFAND4 (ENSPTXG00000008611)	ENSPTXG00000008610	SLAIN1 (ENSPTXG00000008609)	RAP2A (ENSPTXG00000008608)	MBNL2 (ENSPTXG00000008607) #14	ENSPTXG00000008606 #17	ENSPTXG00000008605 #17	ENSPTXG00000008604 #17	DNAJC3 (ENSPTXG00000008603) #18	DZIP1 (ENSPTXG00000008597) #19	CLDN10 (ENSPTXG00000008594) #20	ABCC4 (ENSPTXG00000004551) #21	SOX21 (ENSPTXG00000004527) #22	GPR180 (ENSPTXG00000004526) #23	TGDS (ENSPTXG00000004525) #24	ENSPTXG00000004523 #25	ENSPTXG00000004522 #25	ENSPTXG00000004520 #26	ENSPTXG00000004518 #26	SLITRK5 (ENSPTXG00000004512)	ENSPTXG00000004511	DHPS (ENSPTXG00000004509)	SLITRK6 (ENSPTXG00000004508)
Blue-lipped sea krait	MODERN SPECIES	2323																SOX21 (ENSLLTG00000013527) #22
Lizard	MODERN SPECIES	2	SLAIN1 (ENSACAG00000000948)	RAP2A (ENSACAG00000041592)	ENSACAG00000044831 ##14	MBNL2 (ENSACAG00000000969) #14	ENSACAG00000044385	ENSACAG00000027813 #15	ENSACAG00000001129 #15	HS6ST3 (ENSACAG00000001133) #16	ENSACAG00000038010	UGGT2 (ENSACAG00000001422) #17	DNAJC3 (ENSACAG00000001832) #18	DZIP1 (ENSACAG00000001944) #19	CLDN10 (ENSACAG00000001996) #20	ENSACAG00000043030	ABCC4 (ENSACAG00000002058) #21	SOX21 (ENSACAG00000002492) #22	GPR180 (ENSACAG00000002500) #23	TGDS (ENSACAG00000002532) #24	ENSACAG00000002630 #25	GPC6 (ENSACAG00000002715) #26	ENSACAG00000036026	ENSACAG00000040714	ENSACAG00000037377	ENSACAG00000034989	ENSACAG00000036663	ENSACAG00000045284	ENSACAG00000035161	ENSACAG00000000465	ENSACAG00000036140	ENSACAG00000034954	ENSACAG00000040815
tuatara	MODERN SPECIES	182								OXGR1 (ENSSPUG00000011970) #15	HS6ST3 (ENSSPUG00000011961) #16	ENSSPUG00000011948 #17	ENSSPUG00000011926 #17	DNAJC3 (ENSSPUG00000011904) #18	DZIP1 (ENSSPUG00000011513) #19	CLDN10 (ENSSPUG00000011428) #20	ABCC4 (ENSSPUG00000011321) #21	SOX21 (ENSSPUG00000011297) #22	GPR180 (ENSSPUG00000011283) #23	TGDS (ENSSPUG00000011193) #24	DCT (ENSSPUG00000011137) #25	GPC6 (ENSSPUG00000011108) #26	GPC5 (ENSSPUG00000011089)
Anura	ANCESTRAL SPECIES	3	ENSGT01100000263536.C	ENSGT00940000155972.B #7	ENSGT00940000155995 #8	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000159806 #18	ENSGT00940000156862 #19	ENSGT00940000155232.a #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244897.a.b.b.a.b ##26	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT01080000257332.A	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b
Leishan spiny toad	MODERN SPECIES	5	RAP2A (ENSLLEG00000003463)	MBNL2 (ENSLLEG00000003521) #14	OXGR1 (ENSLLEG00000003620) #15	HS6ST3 (ENSLLEG00000003631) #16	ENSLLEG00000003638	ENSLLEG00000003643	UGGT2 (ENSLLEG00000003673) #17	ENSLLEG00000003705	DNAJC3 (ENSLLEG00000003719) #18	DZIP1 (ENSLLEG00000003755) #19	ENSLLEG00000003781 #20	ABCC4 (ENSLLEG00000003791) #21	ENSLLEG00000003819	ENSLLEG00000003822	ENSLLEG00000003824	SOX21 (ENSLLEG00000003832) #22	ENSLLEG00000003840	GPR180 (ENSLLEG00000003848) #23	TGDS (ENSLLEG00000003863) #24	ENSLLEG00000000233	DCT (ENSLLEG00000000252) #25	ENSLLEG00000000290 #26	ENSLLEG00000000303	ENSLLEG00000000313 #26	ENSLLEG00000000326 ##26	ENSLLEG00000000360	ENSLLEG00000000366	SLITRK5 (ENSLLEG00000000373)	SLITRK6 (ENSLLEG00000000384)	ENSLLEG00000000406	SLITRK1 (ENSLLEG00000000417)
Frog	MODERN SPECIES	2	slc15a1 (ENSXETG00000032587) #8	ENSXETG00000048718	stk24 (ENSXETG00000023524) #10	farp1 (ENSXETG00000030247) #11	ipo5 (ENSXETG00000023496) #13	ENSXETG00000034463	rap2a (ENSXETG00000023495)	mbnl2 (ENSXETG00000033349) #14	nr1d1 (ENSXETG00000004076) #16	ENSXETG00000039543 #16	uggt2 (ENSXETG00000006456) #17	dnajc3 (ENSXETG00000006458) #18	dzip1 (ENSXETG00000031622) #19	cldn10 (ENSXETG00000035018) #20	abcc4 (ENSXETG00000010958) #21	sox21 (ENSXETG00000043737) #22	gpr180 (ENSXETG00000010953) #23	tgds (ENSXETG00000010948) #24	ENSXETG00000044249	dct (ENSXETG00000010942) #25	gpc6 (ENSXETG00000039039) #26	ENSXETG00000042892	ENSXETG00000046895	ENSXETG00000048618	ENSXETG00000047958	slitrk5 (ENSXETG00000023987)	slitrk6 (ENSXETG00000013348)	slitrk1 (ENSXETG00000013354)	ENSXETG00000047077	spry2 (ENSXETG00000045936)	ndfip2 (ENSXETG00000017809)
Coelacanth	MODERN SPECIES	1402															ENSLACG00000022505	SOX21 (ENSLACG00000006585) #22	GPR180 (ENSLACG00000008289) #23	TGDS (ENSLACG00000008746) #24	DCT (ENSLACG00000010066) #25	ENSLACG00000010668 #26
Actinopterygii	ANCESTRAL SPECIES	3	ENSGT00940000153476.b #10	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000156862 #19	ENSGT00940000155232.t.a #20	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b #21	ENSGT00940000155232.t.b.a #20	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT01100000263512.a.a.a.b	ENSGT00390000017860.a.b
Neopterygii	ANCESTRAL SPECIES	13	ENSGT00940000155318 #11	ENSGT00940000155502 #13	ENSGT00730000112498	ENSGT00940000160594	ENSGT00950000182897.B.a.b.b #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000156862 #19	ENSGT00940000155232.t.a #20	ENSGT00940000166809	ENSGT00940000166422	ENSGT00940000155232.t.b.a #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.b #26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT00940000155079.b	ENSGT00940000156743
Osteoglossocephalai	ANCESTRAL SPECIES	22	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT01030000234621.F #15	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000156862 #19	ENSGT00940000155232.t.a.b.b #20	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000166422	ENSGT00940000155232.t.b.a #20	ENSGT00940000153931.b #21	ENSGT00940000162795 #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT00940000160718	ENSGT00940000159810	ENSGT00950000183055.a.a	ENSGT00390000012721.b	ENSGT00510000046929.a	ENSGT00390000013512	ENSGT00940000162154	ENSGT00940000155079.b	ENSGT00940000156743
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	133	ENSGT00940000158781.a	ENSGT00440000037606.b	ENSGT00940000153514.b	ENSGT00940000157974.a	ENSGT00940000153476.b.o.a #10	ENSGT00940000153476.b.o.b #10	ENSGT00940000155972.B.db #7	ENSGT00940000155318.b.b #11	ENSGT00940000155502 #13	ENSGT00940000160594.g.b	ENSGT00950000182897.B.a.b.b.b #14	ENSGT00940000165805	ENSGT00940000156862 #19	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000153931.b #21	ENSGT00940000162795.a #22	ENSGT00940000153981.A.i #23	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01050000244955.a.a.g	ENSGT00940000158453.a.c	ENSGT00940000160718.b	ENSGT00940000159810.b	ENSGT00950000183055.a.a.j	ENSGT00390000012721.b.s	ENSGT00510000046929.a.d	ENSGT00940000162154.b	ENSGT00940000155079.b	ENSGT00940000156743.p.a	ENSGT00940000157767	ENSGT00950000185064
P. kingsleyae	MODERN SPECIES	47	ENSPKIG00000005552	ENSPKIG00000005587	IL10RB (ENSPKIG00000005595)	ENSPKIG00000005609	ENSPKIG00000005624	TMEM50B (ENSPKIG00000005647)	kpnb3 (ENSPKIG00000005687) #13	RAP2A (ENSPKIG00000005758)	MBNL2 (ENSPKIG00000005813) #14	HS6ST3 (ENSPKIG00000005921) #16	dnajc3a (ENSPKIG00000005947)	dzip1 (ENSPKIG00000005997) #19	CLDN10 (ENSPKIG00000006066) #20	cldn10a (ENSPKIG00000006085) #20	ENSPKIG00000006107	sox21b (ENSPKIG00000006125) #22	GPR180 (ENSPKIG00000006143) #23	dct (ENSPKIG00000006169) #25	gpc6b (ENSPKIG00000006285) ##26	gpc5a (ENSPKIG00000006408)	ENSPKIG00000006441	ENSPKIG00000006452	ENSPKIG00000006475	SLITRK5 (ENSPKIG00000006493)	slitrk6 (ENSPKIG00000006524)	SLITRK1 (ENSPKIG00000006548)	SPRY2 (ENSPKIG00000006559)	NDFIP2 (ENSPKIG00000006574)	pou4f1 (ENSPKIG00000006592)	PCDH9 (ENSPKIG00000006631)	PCDH20 (ENSPKIG00000006681)
Asian bonytongue	MODERN SPECIES	3	ENSSFOG00015011838 #8	DOCK9 (ENSSFOG00015011710) #7	FARP1 (ENSSFOG00015011616) #11	ENSSFOG00015026887	ENSSFOG00015024727	ENSSFOG00015006223	RAP2A (ENSSFOG00015006212)	mbnl2 (ENSSFOG00015006106) #14	oxgr1a.2 (ENSSFOG00015006077) #15	HS6ST3 (ENSSFOG00015006050) #16	UGGT2 (ENSSFOG00015005919) #17	CLDN10 (ENSSFOG00015005845) #20	ENSSFOG00015024707	ENSSFOG00015005802	abcc4 (ENSSFOG00015005710) #21	sox21b (ENSSFOG00015026500) #22	GPR180 (ENSSFOG00015005678) #23	TGDS (ENSSFOG00015005632) #24	gpc6b (ENSSFOG00015005580) ##26	gpc5a (ENSSFOG00015005481)	SLITRK5 (ENSSFOG00015005466)	slitrk6 (ENSSFOG00015005456)	SLITRK1 (ENSSFOG00015005449)	ENSSFOG00015028743	spry2 (ENSSFOG00015005431)	ndfip2 (ENSSFOG00015005371)	RBM26 (ENSSFOG00015005311)	OBI1 (ENSSFOG00015005285)	POU4F1 (ENSSFOG00015029288)	PCDH9 (ENSSFOG00015005219)	PCDH20 (ENSSFOG00015005211)
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00940000162795.b #22
P. kingsleyae	MODERN SPECIES	759																sox21b (ENSPKIG00000019293) #22	ENSPKIG00000019307
Clupeocephala	ANCESTRAL SPECIES	3	ENSGT00940000155318.b.a #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT01030000234621.F.d #15	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.a.b.b #20	ENSGT00940000166422	ENSGT00940000155232.t.b.a #20	ENSGT00940000153931.b.b #21	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Otomorpha	DUPLICATION
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	11	ENSGT00940000155972.B #7	ENSGT00940000176946	ENSGT00940000155318.b.a #11	ENSGT00940000160594.g.a	ENSGT00940000160594.h	ENSGT00940000160594.g.b.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795.d #22	ENSGT00940000162795.c.a #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000165888.e	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000163875.a.b.a	ENSGT01060000249008.b	ENSGT00980000198599
Otophysi	ANCESTRAL SPECIES	125																ENSGT00940000162795.c.a #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000165888.e	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000163875.a.b.a	ENSGT01060000249008.b	ENSGT00930000150973.A
Characiphysae	ANCESTRAL SPECIES	119																ENSGT00940000162795.c.a #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000165888.e	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000163875.a.b.a	ENSGT00980000198599	ENSGT00930000150973.A
Channel catfish	MODERN SPECIES	25	ENSIPUG00000014507	me3 (ENSIPUG00000014535)	ENSIPUG00000014593	ENSIPUG00000014602	ENSIPUG00000014625	ENSIPUG00000014646	ENSIPUG00000014690	ENSIPUG00000014702	ENSIPUG00000014720	ENSIPUG00000014733	ENSIPUG00000014749	ENSIPUG00000014761	ENSIPUG00000014778	ENSIPUG00000014798	ENSIPUG00000014823	sox21b (ENSIPUG00000014840) #22	DCT (ENSIPUG00000014850) #25	gpc6b (ENSIPUG00000014881) ##26	ENSIPUG00000014897	cog3 (ENSIPUG00000014908)	frmpd4 (ENSIPUG00000015016)	TLR8 (ENSIPUG00000015044)	tmsb4x (ENSIPUG00000015050)	ENSIPUG00000015069	ENSIPUG00000015089	ARSD (ENSIPUG00000015110)	MXRA5 (ENSIPUG00000015127)	ENSIPUG00000015165	nlgn4xb (ENSIPUG00000015189)	ANOS1 (ENSIPUG00000015237)	GPR143 (ENSIPUG00000015274)
Characiphysae_b	ANCESTRAL SPECIES	123													ENSGT00940000175484	ENSGT00390000001447	ENSGT01090000260051.b.b.dc.b	ENSGT00940000162795.c.a #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000165888.e	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000163875.a.b.a	ENSGT00980000198599	ENSGT00930000150973.A
Characoidei	ANCESTRAL SPECIES	127														ENSGT00940000175484	ENSGT00390000001447	ENSGT00940000162795.c.a #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000165888.e	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000163875.a.b.a	ENSGT00980000198599	ENSGT00930000150973.A
Red-bellied piranha	MODERN SPECIES	356							cops8 (ENSPNAG00000026378)	ENSPNAG00000026353	ENSPNAG00000026341	ENSPNAG00000026329	CLDN14 (ENSPNAG00000026313)	SLC5A7 (ENSPNAG00000026299)	ENSPNAG00000004725	lims2 (ENSPNAG00000026235)	RANBP2 (ENSPNAG00000026129)	sox21b (ENSPNAG00000004006) #22	dct (ENSPNAG00000004001) #25	gpc6b (ENSPNAG00000026048) ##26	ENSPNAG00000025996	pcdh8 (ENSPNAG00000025983)	PCDH8 (ENSPNAG00000025961)	cnmd (ENSPNAG00000025932)	EDNRB (ENSPNAG00000025771)	cog3 (ENSPNAG00000003947)	MID1 (ENSPNAG00000003936)	ARHGAP6 (ENSPNAG00000004964)
Mexicana tetra	MODERN SPECIES	107	ENSAMXG00000032385	ENSAMXG00000031902	ENSAMXG00000029584	ENSAMXG00000033814	mid1ip1a (ENSAMXG00000026063)	OTC (ENSAMXG00000004751)	ENSAMXG00000040566	srpx (ENSAMXG00000042235)	ggact.3 (ENSAMXG00000035973)	SYTL5 (ENSAMXG00000029291)	asb11 (ENSAMXG00000035511)	piga (ENSAMXG00000001948)	ENSAMXG00000035379	prlh (ENSAMXG00000043830)	rpe (ENSAMXG00000001907)	sox21b (ENSAMXG00000030890) #22	dct (ENSAMXG00000001892) #25	gpc6b (ENSAMXG00000001884) ##26	ENSAMXG00000035301	pcdh8 (ENSAMXG00000001879)	PCDH8 (ENSAMXG00000007549)	cnmd (ENSAMXG00000001869)	EDNRB (ENSAMXG00000001844)	cog3 (ENSAMXG00000001820)	MID1 (ENSAMXG00000001793)	ARHGAP6 (ENSAMXG00000001772)	FRMPD4 (ENSAMXG00000001751)	TLR7 (ENSAMXG00000026060)	ENSAMXG00000032611	tmsb4x (ENSAMXG00000041720)	egfl6 (ENSAMXG00000001700)
Electric eel	MODERN SPECIES	619									ENSEEEG00000020766	igsf3 (ENSEEEG00000020768)	igsf3l (ENSEEEG00000020770)	ENSEEEG00000020772	ENSEEEG00000020774	rpe (ENSEEEG00000020775)	ackr3a (ENSEEEG00000020780)	sox21b (ENSEEEG00000020783) #22
Cyprinoidei	ANCESTRAL SPECIES	113													ENSGT01090000259985.b.a.a.a	ENSGT01090000259985.b.a.a.b.e	ENSGT01090000259985.b.b.b.a.b	ENSGT00940000162795.c.a #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000165888.e	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000163875.a.b.a	ENSGT01060000249008.b	ENSGT00930000150973.A
Cyprininae	ANCESTRAL SPECIES	300													ENSGT01090000259985.b.a.a.a	ENSGT01090000259985.b.a.a.b.e.a	ENSGT01090000259985.b.b.b.a.b.w	ENSGT00940000162795.c.a #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a.c ##26	ENSGT00940000158453.b.b	ENSGT00940000165888.e.b	ENSGT00940000155219.hb.b.b	ENSGT00480000042679.b.a.d	ENSGT00390000015682.m	ENSGT00940000155821.c.a.d	ENSGT00940000153904.a.g.b	ENSGT00950000183035.a.b.a.e	ENSGT00940000159771.n	ENSGT00940000163875.a.b.a.d	ENSGT01060000249008.b	ENSGT00930000150973.A.e	ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.a.a.b.a.b.a
Cyprininae_a	ANCESTRAL SPECIES	67	ENSGT01050000244842.a.b.a.p.a	ENSGT00940000155359.w.a.f	ENSGT00940000155655.B.i.a	ENSGT00940000154574.d.m.b	ENSGT00940000164537.c	ENSGT00940000157608	ENSGT00940000158179.b.a	ENSGT00940000153239.A.f	ENSGT00390000015276.g.b	ENSGT00940000159292.u.a	ENSGT00940000158216.d	ENSGT00940000156404.ac	ENSGT01090000259985.b.a.a.a	ENSGT01090000259985.b.a.a.b.e.a	ENSGT01090000259985.b.b.b.a.b.w	ENSGT00940000162795.c.a #22	ENSGT00940000156856.b #25	ENSGT01050000244897.a.b.b.a.a.d ##26	ENSGT00940000158453.b.a	ENSGT00940000165888.e.a	ENSGT00940000155219.hb.b.a	ENSGT00480000042679.b.a.c	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682.n	ENSGT00940000155821.c.a.c	ENSGT00940000153904.a.g.a	ENSGT00950000183035.a.b.a.f	ENSGT00940000159771.m	ENSGT00940000163875.a.b.a.c	ENSGT00980000198599.f.b	ENSGT00930000150973.A.f
Golden-line barbel	DUPLICATION
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	1155										ENSSGRG00000020809	trpm2 (ENSSGRG00000020807)	ENSSGRG00000020806	ENSSGRG00000020804	ENSSGRG00000020803	sox21b (ENSSGRG00000020800) #22	sox21b (ENSSGRG00000020799) #22	dct (ENSSGRG00000020789) #25	gpc6b (ENSSGRG00000020788) ##26	ENSSGRG00000020784	pcdh8 (ENSSGRG00000020783)	PCDH8 (ENSSGRG00000020774)	cnmd (ENSSGRG00000020771)	EDNRB (ENSSGRG00000020770)
Golden-line barbel	MODERN SPECIES	1155											ENSSGRG00000020809	trpm2 (ENSSGRG00000020807)	ENSSGRG00000020806	ENSSGRG00000020804	ENSSGRG00000020803	sox21b (ENSSGRG00000020800) #22	sox21b (ENSSGRG00000020799) #22	dct (ENSSGRG00000020789) #25	gpc6b (ENSSGRG00000020788) ##26	ENSSGRG00000020784	pcdh8 (ENSSGRG00000020783)	PCDH8 (ENSSGRG00000020774)	cnmd (ENSSGRG00000020771)	EDNRB (ENSSGRG00000020770)
Golden-line barbel	MODERN SPECIES	642										ENSSGRG00000038604	xrcc5 (ENSSGRG00000038457)	MAP3K13 (ENSSGRG00000038164)	trpm2 (ENSSGRG00000038158)	ENSSGRG00000038157	ENSSGRG00000038156	sox21b (ENSSGRG00000038155) #22	dct (ENSSGRG00000038153) #25	gpc6b (ENSSGRG00000038151) ##26	ENSSGRG00000038146	pcdh8 (ENSSGRG00000038145)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	27	SLC4A10 (ENSCARG00000030844)	ENSCARG00000030087	PFKL (ENSCARG00000028416)	TMEM169 (ENSCARG00000028312)	MARCHF4 (ENSCARG00000028291)	ENSCARG00000028282	SMARCAL1 (ENSCARG00000028229)	nme9 (ENSCARG00000028145)	ENSCARG00000028133	TANC1 (ENSCARG00000027237)	ENSCARG00000027138	trpm2 (ENSCARG00000026665)	ENSCARG00000026636	ENSCARG00000026626	ENSCARG00000026621	sox21b (ENSCARG00000026619) #22	gpc6b (ENSCARG00000026614) ##26	ENSCARG00000026607	pcdh8 (ENSCARG00000026601)	PCDH8 (ENSCARG00000026598)	ENSCARG00000026574	EDNRB (ENSCARG00000026564)	ENSCARG00000026555	MID1 (ENSCARG00000026362)	ARHGAP6 (ENSCARG00000026342)	FRMPD4 (ENSCARG00000026271)	TLR7 (ENSCARG00000026263)	ENSCARG00000026256	tmsb4x (ENSCARG00000026250)	egfl6 (ENSCARG00000026203)	ENSCARG00000026191
Goldfish	MODERN SPECIES	49	BAZ2B (ENSCARG00000000332)	ENSCARG00000000292	ENSCARG00000000281	TANC1 (ENSCARG00000005026)	dap1b (ENSCARG00000004769)	MARCHF4 (ENSCARG00000004760)	xrcc5 (ENSCARG00000004660)	TMEM169 (ENSCARG00000004624)	MAP3K13 (ENSCARG00000004100)	trpm2 (ENSCARG00000003260)	ENSCARG00000003151	ENSCARG00000003143	ENSCARG00000003116	ENSCARG00000003114	ENSCARG00000003098	sox21b (ENSCARG00000003089) #22	dct (ENSCARG00000003071) #25	gpc6b (ENSCARG00000002996) ##26	ENSCARG00000002978	pcdh8 (ENSCARG00000002966)	PCDH8 (ENSCARG00000002956)	cnmd (ENSCARG00000002951)	cog3 (ENSCARG00000002704)	MID1 (ENSCARG00000002626)	ARHGAP6 (ENSCARG00000002605)	FRMPD4 (ENSCARG00000002581)	TLR7 (ENSCARG00000002563)	ENSCARG00000002556	tmsb4x (ENSCARG00000002548)	egfl6 (ENSCARG00000002520)	ENSCARG00000002504
Zebrafish	MODERN SPECIES	24	dap1b (ENSDARG00000086842)	ENSDARG00000109678	nme9 (ENSDARG00000098944)	ENSDARG00000102265	marchf4 (ENSDARG00000056439)	xrcc5 (ENSDARG00000099298)	TMEM169 (ENSDARG00000078762)	ENSDARG00000101774	PFKL (ENSDARG00000060504)	MAP3K13 (ENSDARG00000009493)	ENSDARG00000099404	trpm2 (ENSDARG00000101641)	ENSDARG00000101527	ENSDARG00000090844	ENSDARG00000088672	sox21b (ENSDARG00000008540) #22	dct (ENSDARG00000006008) #25	gpc6b (ENSDARG00000104219) ##26	ENSDARG00000074153	ENSDARG00000111522	pcdh8 (ENSDARG00000006467)	PCDH8 (ENSDARG00000102185)	cnmd (ENSDARG00000100133)	EDNRB (ENSDARG00000053498)	cog3 (ENSDARG00000101999)	MID1 (ENSDARG00000060482)	FRMPD4 (ENSDARG00000075685)	TLR7 (ENSDARG00000068812)	ENSDARG00000104832	tmsb4x (ENSDARG00000077777)	ENSDARG00000090988
Clupeiformes	ANCESTRAL SPECIES	1	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a #11	ENSGT00940000160594.g.a	ENSGT00940000160594.h	ENSGT00950000182897.B.a.b.b.a #14	ENSGT01030000234621.F.d #15	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795.c.a #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000165888.e	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879	ENSGT00940000163875.a.b.a	ENSGT01060000249008.b
Denticle herring	MODERN SPECIES	19	RAP2A (ENSDCDG00000020522)	MBNL2 (ENSDCDG00000020527) #14	ENSDCDG00000020547	ENSDCDG00000020550	ENSDCDG00000020553	ENSDCDG00000020578	ENSDCDG00000020594	ENSDCDG00000020596	HS6ST3 (ENSDCDG00000020598) #16	UGGT2 (ENSDCDG00000020643) #17	dnajc3a (ENSDCDG00000022182)	CLDN10 (ENSDCDG00000022202) #20	ENSDCDG00000022209	cldn10b (ENSDCDG00000022213) #20	ABCC4 (ENSDCDG00000022218) #21	sox21b (ENSDCDG00000022229) #22	dct (ENSDCDG00000022237) #25	gpc6b (ENSDCDG00000022252) ##26	ENSDCDG00000022603	pcdh8 (ENSDCDG00000022605)	ENSDCDG00000022606	PCDH8 (ENSDCDG00000022608)	cnmd (ENSDCDG00000022611)	EDNRB (ENSDCDG00000022616)	cog3 (ENSDCDG00000022841)	MID1 (ENSDCDG00000022849)	ENSDCDG00000022853	cnmd (ENSDCDG00000022867)	EDNRB (ENSDCDG00000022897)	cog3 (ENSDCDG00000023179)	ENSDCDG00000023188
Otomorpha	ANCESTRAL SPECIES	155										ENSGT00950000183071.a.a.a.e.b.g #16	ENSGT00940000156862 #19	ENSGT00940000155232.t.a.b.b #20	ENSGT00940000166422	ENSGT00940000155232.t.b.a #20	ENSGT00940000153931.b.b #21	ENSGT00940000162795.c.b #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT01060000248589.C.g.b	ENSGT00940000155600.a.a	ENSGT00940000155375.p	ENSGT00940000154443.g	ENSGT00940000154517.nb	ENSGT00940000166518	ENSGT00940000162831	ENSGT00940000157440.m.b	ENSGT00940000153648.a	ENSGT01030000234555.b.f	ENSGT00940000161090.A	ENSGT00940000163961.b.j	ENSGT00950000182969.A.b
Clupeiformes	ANCESTRAL SPECIES	392														ENSGT00940000155232.t.b.a #20	ENSGT00940000153931.b.b #21	ENSGT00940000162795.c.b #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT01060000248589.C.g.b	ENSGT00940000155600.a.a	ENSGT00940000155375.p	ENSGT00940000154443.g	ENSGT00940000154517.nb	ENSGT00940000166518	ENSGT00940000157440.m.b
Denticle herring	MODERN SPECIES	6	ENSDCDG00000035705	GPR161 (ENSDCDG00000035703)	atg3 (ENSDCDG00000035698)	SLC19A2 (ENSDCDG00000035685)	ENSDCDG00000035681	faimb (ENSDCDG00000035680)	AGAP1 (ENSDCDG00000035651)	gbx2 (ENSDCDG00000035616)	iqca1 (ENSDCDG00000035604)	ackr3b (ENSDCDG00000035596)	trim63a (ENSDCDG00000035595)	mlpha (ENSDCDG00000035594)	LRRFIP1 (ENSDCDG00000035587)	cldn10a (ENSDCDG00000035586) #20	abcc4 (ENSDCDG00000035439) #21	SOX21 (ENSDCDG00000035420) #22	GPR180 (ENSDCDG00000035418) #23	TGDS (ENSDCDG00000035416) #24	GPR34 (ENSDCDG00000035415)	caskb (ENSDCDG00000035398)	ENSDCDG00000035230	ddx3xb (ENSDCDG00000034724)	ENSDCDG00000034651	kdm6al (ENSDCDG00000034117)	ENSDCDG00000033249	TMEM19 (ENSDCDG00000033197)	LGR5 (ENSDCDG00000033166)	TSPAN8 (ENSDCDG00000033150)	ENSDCDG00000033147	ENSDCDG00000033142	ENSDCDG00000033141
Otophysi	ANCESTRAL SPECIES	49	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b.ld	ENSGT00940000156983.a.a.q	ENSGT00390000006916.c	ENSGT00940000153431.b	ENSGT00940000154866.B.b	ENSGT00940000156075.a.b	ENSGT00940000163262.b	ENSGT00950000183071.a.a.a.e.b.g #16	ENSGT00940000156862 #19	ENSGT00940000155232.t.a.b.b #20	ENSGT00940000166422	ENSGT00940000155232.t.b.a #20	ENSGT00940000153931.b.b #21	ENSGT00940000162795.c.b #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00940000159395.d	ENSGT01060000248589.C.g.b	ENSGT00940000155600.a.a	ENSGT00940000155375.p	ENSGT00940000154443.g	ENSGT00940000154517.nb	ENSGT00940000166518	ENSGT00940000162831	ENSGT00940000157440.m.b	ENSGT00940000153648.a	ENSGT01030000234555.b.f	ENSGT00940000161090.A	ENSGT00940000163961.b.j
Characiphysae	ANCESTRAL SPECIES	177	ENSGT00940000156075.a.b	ENSGT00940000163262.b	ENSGT00950000183165.b.b	ENSGT00950000183165.b.a.e.a	ENSGT00950000182882.A.b.b.f	ENSGT00940000164444.b	ENSGT00390000009940	ENSGT00390000010308	ENSGT00940000157829.m.a	ENSGT00950000183071.a.a.a.e.b.g #16	ENSGT00940000156862 #19	ENSGT00940000155232.t.a.b.b #20	ENSGT00940000166422	ENSGT00940000155232.t.b.a #20	ENSGT00940000153931.b.b #21	ENSGT00940000162795.c.b #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24
Characiphysae_b	ANCESTRAL SPECIES	50	ENSGT00940000153431.b	ENSGT00940000154866.B.b	ENSGT00940000156075.a.b	ENSGT00940000163262.b	ENSGT00950000183165.b.a.e.b.e	ENSGT00950000182882.A.b.b.f	ENSGT00940000164444.b.d	ENSGT00390000009940	ENSGT00390000010308	ENSGT00940000157829.m.a	ENSGT00940000156862 #19	ENSGT00940000155232.t.a.b.b #20	ENSGT00940000166422	ENSGT00940000155232.t.b.a #20	ENSGT00940000153931.b.b #21	ENSGT00940000162795.c.b #22	ENSGT00940000153981.A #23	ENSGT00940000159196 #24	ENSGT00390000003758	ENSGT00940000159144.B.y.a	ENSGT00940000163647.d	ENSGT00390000005130	ENSGT00970000196952	ENSGT00940000156877	ENSGT00390000013956	ENSGT00390000017860.a.b.f	ENSGT00940000159395.d	ENSGT01060000248589.C.g.b	ENSGT00940000155600.a.a	ENSGT00940000155375.p	ENSGT00940000154443.g
Electric eel	MODERN SPECIES	10	ENSEEEG00000006143	ENSEEEG00000006210	bin1b (ENSEEEG00000006228)	ihhb (ENSEEEG00000006237)	ENSEEEG00000006243	nhej1 (ENSEEEG00000006244)	atg3 (ENSEEEG00000006247)	GPR161 (ENSEEEG00000006265)	ENSEEEG00000006271	ENSEEEG00000006330 #16	ENSEEEG00000006333 #19	CLDN10 (ENSEEEG00000006336) #20	ENSEEEG00000006340	cldn10a (ENSEEEG00000006342) #20	abcc4 (ENSEEEG00000006358) #21	SOX21 (ENSEEEG00000006543) #22	pak2a (ENSEEEG00000006554)	ENSEEEG00000006613	pdcd10b (ENSEEEG00000006615)	SLITRK3 (ENSEEEG00000006618)	ENSEEEG00000006619	ENSEEEG00000006620	CARTPT (ENSEEEG00000006621)	gadd45bb (ENSEEEG00000006622)	gng7 (ENSEEEG00000006623)	diras1b (ENSEEEG00000006624)	zgc:101744 (ENSEEEG00000006625)	elavl1a (ENSEEEG00000006626)	pex19 (ENSEEEG00000006628)	copa (ENSEEEG00000006635)	apoda.1 (ENSEEEG00000006655)
Otomorpha	ANCESTRAL SPECIES	11	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946	ENSGT00940000155318.b.a #11	ENSGT00940000160594.g.a	ENSGT00940000160594.h	ENSGT00940000160594.g.b.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795.d #22	ENSGT00940000162795.c.a #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000165888.e	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000163875.a.b.a	ENSGT01060000249008.b
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00940000162795.d #22
Atlantic herring	MODERN SPECIES	11	ENSCHAG00000026125	ENSCHAG00000026126	ENSCHAG00000026127	ENSCHAG00000026130	ENSCHAG00000026132	ENSCHAG00000026135	ENSCHAG00000026136	ENSCHAG00000026141	ENSCHAG00000026142 #15	HS6ST3 (ENSCHAG00000026144) #16	UGGT2 (ENSCHAG00000026190) #17	dnajc3a (ENSCHAG00000026570)	CLDN10 (ENSCHAG00000026592) #20	cldn10b (ENSCHAG00000026622) #20	ABCC4 (ENSCHAG00000026677) #21	sox21b (ENSCHAG00000026784) #22	dct (ENSCHAG00000026799) #25	gpc6b (ENSCHAG00000026845) ##26	ENSCHAG00000026866	ENSCHAG00000026867	pcdh8 (ENSCHAG00000026869)	PCDH8 (ENSCHAG00000026872)	cnmd (ENSCHAG00000026874)	EDNRB (ENSCHAG00000026878)	cog3 (ENSCHAG00000026935)	MID1 (ENSCHAG00000027139)	ARHGAP6 (ENSCHAG00000027163)	FRMPD4 (ENSCHAG00000027237)	TLR7 (ENSCHAG00000027268)	ENSCHAG00000027272	ENSCHAG00000027274
Euteleosteomorpha	ANCESTRAL SPECIES	6	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT01030000234621.F.d #15	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000166422	ENSGT00940000155232.t.b.a #20	ENSGT00940000153931.b.b #21	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Acanthomorphata	ANCESTRAL SPECIES	5	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Pinecone sodierfish	MODERN SPECIES	13	STK24 (ENSMMDG00005021531) #10	SLC15A1 (ENSMMDG00005021631) #8	DOCK9 (ENSMMDG00005022137) #7	FARP1 (ENSMMDG00005022636) #11	RAP2A (ENSMMDG00005023236)	MBNL2 (ENSMMDG00005023241) #14	HS6ST3 (ENSMMDG00005023300) #16	UGGT2 (ENSMMDG00005023350) #17	dnajc3a (ENSMMDG00005023800)	CLDN10 (ENSMMDG00005023807) #20	ENSMMDG00005023808	cldn10b (ENSMMDG00005023810) #20	CLDN10 (ENSMMDG00005023815) #20	CLDN10 (ENSMMDG00005023816) #20	ABCC4 (ENSMMDG00005023836) #21	sox21b (ENSMMDG00005023861) #22	dct (ENSMMDG00005023862) #25	gpc6b (ENSMMDG00005023864) ##26	ENSMMDG00005023900	PCDH17 (ENSMMDG00005023903)	PCDH8 (ENSMMDG00005023907)	cnmd (ENSMMDG00005023909)	EDNRB (ENSMMDG00005023913)	cog3 (ENSMMDG00005023917)	MID1 (ENSMMDG00005023927)	ARHGAP6 (ENSMMDG00005023939)	FRMPD4 (ENSMMDG00005024023)	ENSMMDG00005024037	egfl6 (ENSMMDG00005024040)	RAB9A (ENSMMDG00005024043)	ENSMMDG00005024045
Percomorphaceae	ANCESTRAL SPECIES	23	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
Tiger tail seahorse	MODERN SPECIES	313	ENSHCOG00000017217	ENSHCOG00000015460	ENSHCOG00000015409	ENSHCOG00000015405	ENSHCOG00000015391	snx4 (ENSHCOG00000000431)	RAP2A (ENSHCOG00000015327)	MBNL2 (ENSHCOG00000015316) #14	HS6ST3 (ENSHCOG00000015274) #16	UGGT2 (ENSHCOG00000015247) #17	dnajc3a (ENSHCOG00000014985)	CLDN10 (ENSHCOG00000014940) #20	ENSHCOG00000014923	cldn10b (ENSHCOG00000014914) #20	ABCC4 (ENSHCOG00000014872) #21	sox21b (ENSHCOG00000014821) #22	dct (ENSHCOG00000014803) #25	gpc6b (ENSHCOG00000014784) ##26	FASTKD5 (ENSHCOG00000014766)	ENSHCOG00000014758	PCDH17 (ENSHCOG00000014752)
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Pomacentridae	ANCESTRAL SPECIES	17	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Pomacentridae_A	ANCESTRAL SPECIES	14	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Amphiprion	ANCESTRAL SPECIES	8	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.s #20	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Clown anemonefish	MODERN SPECIES	1026					ENSAOCG00000015812	FARP1 (ENSAOCG00000015766) #11	RAP2A (ENSAOCG00000015516)	MBNL2 (ENSAOCG00000015492) #14	HS6ST3 (ENSAOCG00000015424) #16	UGGT2 (ENSAOCG00000015408) #17	dnajc3a (ENSAOCG00000015293)	ENSAOCG00000015248	CLDN10 (ENSAOCG00000015214) #20	cldn10b (ENSAOCG00000015193) #20	ENSAOCG00000015158 #21	sox21b (ENSAOCG00000015089) #22	dct (ENSAOCG00000015081) #25	gpc6b (ENSAOCG00000015047) ##26	FASTKD5 (ENSAOCG00000001046)	ENSAOCG00000014990	PCDH17 (ENSAOCG00000001936)	pcdh8 (ENSAOCG00000002170)	PCDH8 (ENSAOCG00000014962)	cnmd (ENSAOCG00000014945)	EDNRB (ENSAOCG00000001021)
Orange clownfish	MODERN SPECIES	3	INO80D (ENSAPEG00000022901)	STK24 (ENSAPEG00000022931) #10	SLC15A1 (ENSAPEG00000022998) #8	DOCK9 (ENSAPEG00000023247) #7	ENSAPEG00000023378	FARP1 (ENSAPEG00000023390) #11	RAP2A (ENSAPEG00000023444)	MBNL2 (ENSAPEG00000023468) #14	HS6ST3 (ENSAPEG00000023526) #16	UGGT2 (ENSAPEG00000023582) #17	dnajc3a (ENSAPEG00000023642)	CLDN10 (ENSAPEG00000023683) #20	ENSAPEG00000023695	CLDN10 (ENSAPEG00000023703) #20	ABCC4 (ENSAPEG00000023749) #21	sox21b (ENSAPEG00000023775) #22	dct (ENSAPEG00000023785) #25	gpc6b (ENSAPEG00000023811) ##26	FASTKD5 (ENSAPEG00000023845)	ENSAPEG00000023873	PCDH17 (ENSAPEG00000023878)	pcdh8 (ENSAPEG00000023885)	PCDH8 (ENSAPEG00000023893)	cnmd (ENSAPEG00000023900)	EDNRB (ENSAPEG00000023924)	cog3 (ENSAPEG00000023974)	MID1 (ENSAPEG00000024004)	ARHGAP6 (ENSAPEG00000024036)	ENSAPEG00000024053	FRMPD4 (ENSAPEG00000024083)	TLR7 (ENSAPEG00000024097)
Spiny chromis	MODERN SPECIES	91			ENSAPOG00000023466 #7	ENSAPOG00000023396	ENSAPOG00000023358 #11	RAP2A (ENSAPOG00000023183)	MBNL2 (ENSAPOG00000023160) #14	HS6ST3 (ENSAPOG00000023079) #16	UGGT2 (ENSAPOG00000000659) #17	dnajc3a (ENSAPOG00000022803)	CLDN10 (ENSAPOG00000022756) #20	ENSAPOG00000022731	cldn10b (ENSAPOG00000022704) #20	ABCC4 (ENSAPOG00000022683) #21	ENSAPOG00000022605	sox21b (ENSAPOG00000022593) #22	dct (ENSAPOG00000022579) #25	gpc6b (ENSAPOG00000022532) ##26	FASTKD5 (ENSAPOG00000022447)	ENSAPOG00000022429	PCDH17 (ENSAPOG00000022422)	pcdh8 (ENSAPOG00000022408)	PCDH8 (ENSAPOG00000022381)	cnmd (ENSAPOG00000022369)	EDNRB (ENSAPOG00000022331)	cog3 (ENSAPOG00000000912)	MID1 (ENSAPOG00000022136)	ARHGAP6 (ENSAPOG00000022096)	FRMPD4 (ENSAPOG00000022040)	TLR7 (ENSAPOG00000022001)	TLR8 (ENSAPOG00000021967)
Bicolor damselfish	MODERN SPECIES	510	CMKLR2 (ENSSPAG00000008355)	NDUFS1 (ENSSPAG00000008289)	INO80D (ENSSPAG00000008232)	STK24 (ENSSPAG00000008192) #10	SLC15A1 (ENSSPAG00000006750) #8	DOCK9 (ENSSPAG00000006529) #7	FARP1 (ENSSPAG00000006462) #11	RAP2A (ENSSPAG00000006449)	MBNL2 (ENSSPAG00000006349) #14	HS6ST3 (ENSSPAG00000006207) #16	UGGT2 (ENSSPAG00000005936) #17	dnajc3a (ENSSPAG00000005884)	ENSSPAG00000005868	cldn10b (ENSSPAG00000005854) #20	ABCC4 (ENSSPAG00000005806) #21	sox21b (ENSSPAG00000005790) #22	dct (ENSSPAG00000005764) #25
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879.e.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879.e.a
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879.e.a.a.b
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879.e.a.b
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879.e.a.b
Zebra mbuna	MODERN SPECIES	1098	STK24 (ENSMZEG00005004236) #10	SLC15A1 (ENSMZEG00005003888) #8	DOCK9 (ENSMZEG00005003710) #7	ENSMZEG00005003695	FARP1 (ENSMZEG00005003629) #11	RAP2A (ENSMZEG00005003608)	MBNL2 (ENSMZEG00005003492) #14	HS6ST3 (ENSMZEG00005003479) #16	UGGT2 (ENSMZEG00005003302) #17	dnajc3a (ENSMZEG00005003248)	CLDN10 (ENSMZEG00005003232) #20	ENSMZEG00005003224	cldn10b (ENSMZEG00005003201) #20	ENSMZEG00005003119	ABCC4 (ENSMZEG00005003051) #21	sox21b (ENSMZEG00005003041) #22	dct (ENSMZEG00005003018) #25	gpc6b (ENSMZEG00005002991) ##26	ENSMZEG00005002968	ENSMZEG00005002961	PCDH17 (ENSMZEG00005002949)	pcdh8 (ENSMZEG00005002930)	PCDH8 (ENSMZEG00005002926)	cnmd (ENSMZEG00005002908)	EDNRB (ENSMZEG00005002828)	cog3 (ENSMZEG00005002749)	MID1 (ENSMZEG00005002632)	ARHGAP6 (ENSMZEG00005002618)	FRMPD4 (ENSMZEG00005002590)	ENSMZEG00005002562	ENSMZEG00005002543
Eastern happy	MODERN SPECIES	7	NDUFS1 (ENSACLG00000008263)	INO80D (ENSACLG00000008245)	STK24 (ENSACLG00000008226) #10	SLC15A1 (ENSACLG00000008071) #8	DOCK9 (ENSACLG00000007989) #7	FARP1 (ENSACLG00000007884) #11	RAP2A (ENSACLG00000007862)	MBNL2 (ENSACLG00000007843) #14	HS6ST3 (ENSACLG00000007838) #16	UGGT2 (ENSACLG00000007693) #17	dnajc3a (ENSACLG00000007674)	CLDN10 (ENSACLG00000007665) #20	ENSACLG00000007658	cldn10b (ENSACLG00000007647) #20	ABCC4 (ENSACLG00000007607) #21	sox21b (ENSACLG00000007603) #22	dct (ENSACLG00000007426) #25	gpc6b (ENSACLG00000007409) ##26	ENSACLG00000007377	ENSACLG00000007373	PCDH17 (ENSACLG00000007369)	pcdh8 (ENSACLG00000007363)	PCDH8 (ENSACLG00000007358)	cnmd (ENSACLG00000007349)	EDNRB (ENSACLG00000007283)	cog3 (ENSACLG00000006976)	MID1 (ENSACLG00000006937)	ARHGAP6 (ENSACLG00000006742)	FRMPD4 (ENSACLG00000006694)	TLR7 (ENSACLG00000006686)	TLR8 (ENSACLG00000006683)
P. nyererei	MODERN SPECIES	304	INO80D (ENSPNYG00000009117)	STK24 (ENSPNYG00000009151) #10	SLC15A1 (ENSPNYG00000009305) #8	DOCK9 (ENSPNYG00000010016) #7	ENSPNYG00000010161	FARP1 (ENSPNYG00000010234) #11	RAP2A (ENSPNYG00000010521)	MBNL2 (ENSPNYG00000010558) #14	HS6ST3 (ENSPNYG00000010603) #16	UGGT2 (ENSPNYG00000010642) #17	dnajc3a (ENSPNYG00000010810)	CLDN10 (ENSPNYG00000010847) #20	ENSPNYG00000010868	CLDN10 (ENSPNYG00000010892) #20	ABCC4 (ENSPNYG00000011000) #21	sox21b (ENSPNYG00000011088) #22	dct (ENSPNYG00000011094) #25	gpc6b (ENSPNYG00000011126) ##26	ENSPNYG00000011185	ENSPNYG00000011192	PCDH17 (ENSPNYG00000011198)	pcdh8 (ENSPNYG00000011213)	PCDH8 (ENSPNYG00000011238)	cnmd (ENSPNYG00000011255)	EDNRB (ENSPNYG00000011304)	cog3 (ENSPNYG00000011331)	MID1 (ENSPNYG00000011411)	ENSPNYG00000011453	FRMPD4 (ENSPNYG00000011553)	TLR7 (ENSPNYG00000011585)	ENSPNYG00000011621
Burton s mouthbrooder	MODERN SPECIES	311	INO80D (ENSHBUG00000020389)	STK24 (ENSHBUG00000020466) #10	SLC15A1 (ENSHBUG00000021092) #8	DOCK9 (ENSHBUG00000021272) #7	ENSHBUG00000021296	FARP1 (ENSHBUG00000021791) #11	RAP2A (ENSHBUG00000000675)	MBNL2 (ENSHBUG00000021860) #14	HS6ST3 (ENSHBUG00000021885) #16	UGGT2 (ENSHBUG00000022024) #17	dnajc3a (ENSHBUG00000022066)	CLDN10 (ENSHBUG00000022084) #20	ENSHBUG00000022091	cldn10b (ENSHBUG00000022111) #20	ABCC4 (ENSHBUG00000022166) #21	sox21b (ENSHBUG00000022173) #22	dct (ENSHBUG00000022192) #25	gpc6b (ENSHBUG00000022261) ##26	ENSHBUG00000022293	ENSHBUG00000022297	PCDH17 (ENSHBUG00000022307)	pcdh8 (ENSHBUG00000022329)	PCDH8 (ENSHBUG00000022336)	cnmd (ENSHBUG00000022360)	EDNRB (ENSHBUG00000022366)	cog3 (ENSHBUG00000000688)	MID1 (ENSHBUG00000022494)	ARHGAP6 (ENSHBUG00000022559)	FRMPD4 (ENSHBUG00000022602)	TLR7 (ENSHBUG00000022613)	ENSHBUG00000022626
Lyretail cichlid	MODERN SPECIES	303	NDUFS1 (ENSNBRG00000010636)	INO80D (ENSNBRG00000010607)	ENSNBRG00000010594	SLC15A1 (ENSNBRG00000010310) #8	DOCK9 (ENSNBRG00000010144) #7	FARP1 (ENSNBRG00000010082) #11	RAP2A (ENSNBRG00000009947)	MBNL2 (ENSNBRG00000009899) #14	HS6ST3 (ENSNBRG00000009862) #16	UGGT2 (ENSNBRG00000009753) #17	dnajc3a (ENSNBRG00000009711)	CLDN10 (ENSNBRG00000009696) #20	ENSNBRG00000009685	cldn10b (ENSNBRG00000009661) #20	ABCC4 (ENSNBRG00000009580) #21	sox21b (ENSNBRG00000009565) #22	dct (ENSNBRG00000009541) #25	gpc6b (ENSNBRG00000009512) ##26	ENSNBRG00000009402	ENSNBRG00000009393	PCDH17 (ENSNBRG00000009371)	pcdh8 (ENSNBRG00000009356)	PCDH8 (ENSNBRG00000009336)	cnmd (ENSNBRG00000009312)	EDNRB (ENSNBRG00000009214)	cog3 (ENSNBRG00000009148)	MID1 (ENSNBRG00000009007)	ARHGAP6 (ENSNBRG00000008899)	FRMPD4 (ENSNBRG00000008838)	TLR7 (ENSNBRG00000008807)	ENSNBRG00000008789
Midas cichlid	MODERN SPECIES	998	NDUFS1 (ENSACIG00000019751)	INO80D (ENSACIG00000019720)	STK24 (ENSACIG00000019694) #10	ENSACIG00000019680 #8	DOCK9 (ENSACIG00000019562) #7	FARP1 (ENSACIG00000019288) #11	RAP2A (ENSACIG00000019158)	MBNL2 (ENSACIG00000019146) #14	HS6ST3 (ENSACIG00000019090) #16	UGGT2 (ENSACIG00000019024) #17	dnajc3a (ENSACIG00000019002)	CLDN10 (ENSACIG00000018987) #20	ENSACIG00000018981	cldn10b (ENSACIG00000018971) #20	ABCC4 (ENSACIG00000018926) #21	sox21b (ENSACIG00000018909) #22	dct (ENSACIG00000018896) #25	gpc6b (ENSACIG00000018880) ##26	FASTKD5 (ENSACIG00000018867)	ENSACIG00000018858	PCDH17 (ENSACIG00000018849)	pcdh8 (ENSACIG00000018840)	PCDH8 (ENSACIG00000018836)	cnmd (ENSACIG00000018824)	EDNRB (ENSACIG00000018784)
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g
Oryzias	ANCESTRAL SPECIES	10	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Indian medaka	MODERN SPECIES	18	STK24 (ENSOMEG00000005455) #10	SLC15A1 (ENSOMEG00000005543) #8	ENSOMEG00000005590 #7	ENSOMEG00000005665 #7	ENSOMEG00000005681	FARP1 (ENSOMEG00000000750) #11	RAP2A (ENSOMEG00000006006)	MBNL2 (ENSOMEG00000006027) #14	HS6ST3 (ENSOMEG00000006037) #16	UGGT2 (ENSOMEG00000006151) #17	dnajc3a (ENSOMEG00000006210)	CLDN10 (ENSOMEG00000006227) #20	ENSOMEG00000006245	CLDN10 (ENSOMEG00000006256) #20	ABCC4 (ENSOMEG00000006297) #21	sox21b (ENSOMEG00000006305) #22	dct (ENSOMEG00000006335) #25	gpc6b (ENSOMEG00000006361) ##26	FASTKD5 (ENSOMEG00000006395)	ENSOMEG00000006404	PCDH17 (ENSOMEG00000006414)	pcdh8 (ENSOMEG00000006431)	PCDH8 (ENSOMEG00000006447)	cnmd (ENSOMEG00000006459)	EDNRB (ENSOMEG00000006490)	cog3 (ENSOMEG00000006558)	MID1 (ENSOMEG00000006656)	ARHGAP6 (ENSOMEG00000006700)	ENSOMEG00000006712	FRMPD4 (ENSOMEG00000001044)	TLR7 (ENSOMEG00000006776)
Javanese ricefish	MODERN SPECIES	13	ADAM23 (ENSOJAG00000022788)	CMKLR2 (ENSOJAG00000022704)	NDUFS1 (ENSOJAG00000022690)	INO80D (ENSOJAG00000022689)	STK24 (ENSOJAG00000022686) #10	FARP1 (ENSOJAG00000016839) #11	RAP2A (ENSOJAG00000016606)	MBNL2 (ENSOJAG00000016580) #14	HS6ST3 (ENSOJAG00000016571) #16	UGGT2 (ENSOJAG00000016219) #17	dnajc3a (ENSOJAG00000015972)	CLDN10 (ENSOJAG00000015931) #20	ENSOJAG00000015925	cldn10b (ENSOJAG00000015917) #20	ABCC4 (ENSOJAG00000015557) #21	sox21b (ENSOJAG00000015512) #22	dct (ENSOJAG00000015489) #25	ENSOJAG00000015479	gpc6b (ENSOJAG00000015368) ##26	FASTKD5 (ENSOJAG00000015347)	ENSOJAG00000015329	PCDH17 (ENSOJAG00000015319)	pcdh8 (ENSOJAG00000015298)	PCDH8 (ENSOJAG00000015291)	cnmd (ENSOJAG00000015222)	EDNRB (ENSOJAG00000015208)	cog3 (ENSOJAG00000014253)	MID1 (ENSOJAG00000014002)	ARHGAP6 (ENSOJAG00000013773)	FRMPD4 (ENSOJAG00000013583)	TLR7 (ENSOJAG00000013562)
Oryzias_a	ANCESTRAL SPECIES	21	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Chinese medaka	MODERN SPECIES	394	ENSOSIG00000000778	ENSOSIG00000000781	INO80D (ENSOSIG00000000785)	ENSOSIG00000000798 #10	SLC15A1 (ENSOSIG00000000908) #8	FARP1 (ENSOSIG00000005988) #11	RAP2A (ENSOSIG00000006460)	MBNL2 (ENSOSIG00000006463) #14	HS6ST3 (ENSOSIG00000006470) #16	UGGT2 (ENSOSIG00000006510) #17	dnajc3a (ENSOSIG00000012876)	CLDN10 (ENSOSIG00000012974) #20	ENSOSIG00000012976	CLDN10 (ENSOSIG00000012979) #20	ABCC4 (ENSOSIG00000012995) #21	sox21b (ENSOSIG00000013058) #22	dct (ENSOSIG00000013059) #25	gpc6b (ENSOSIG00000013102) ##26	ENSOSIG00000013104	FASTKD5 (ENSOSIG00000013108)	ENSOSIG00000013109	PCDH17 (ENSOSIG00000013110)	pcdh8 (ENSOSIG00000013111)	PCDH8 (ENSOSIG00000013112)	cnmd (ENSOSIG00000013115)	EDNRB (ENSOSIG00000013117)	cog3 (ENSOSIG00000013120)	ENSOSIG00000013545	ARHGAP6 (ENSOSIG00000013552)	FRMPD4 (ENSOSIG00000013563)	TLR7 (ENSOSIG00000013580)
Japanese Medaka HdrR	MODERN SPECIES	13	ENSORLG00000022562	ENSORLG00000017640 #8	ENSORLG00000024320 #7	ENSORLG00000030136 #7	ENSORLG00000017651 #7	ENSORLG00000023726	FARP1 (ENSORLG00000017665) #11	RAP2A (ENSORLG00000023558)	MBNL2 (ENSORLG00000022713) #14	HS6ST3 (ENSORLG00000025769) #16	UGGT2 (ENSORLG00000017690) #17	dnajc3a (ENSORLG00000017711)	CLDN10 (ENSORLG00000027466) #20	CLDN10 (ENSORLG00000027107) #20	ABCC4 (ENSORLG00000017753) #21	sox21b (ENSORLG00000017755) #22	dct (ENSORLG00000017760) #25	gpc6b (ENSORLG00000025732) ##26	FASTKD5 (ENSORLG00000017762)	ENSORLG00000030030	ENSORLG00000017764	ENSORLG00000026961	pcdh8 (ENSORLG00000017768)	ENSORLG00000017770	cnmd (ENSORLG00000021908)	ENSORLG00000017775	cog3 (ENSORLG00000017780)	MID1 (ENSORLG00000017792)	ENSORLG00000028718	FRMPD4 (ENSORLG00000017796)	TLR7 (ENSORLG00000023568)
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT01030000234607.B	ENSGT00940000158859.e	ENSGT00390000002753	ENSGT00940000163195.B.b	ENSGT00940000165617	ENSGT00940000157232	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
Poeciliinae	ANCESTRAL SPECIES		ENSGT01030000234607.B	ENSGT00940000158859.e	ENSGT00390000002753	ENSGT00940000163195.B.b	ENSGT00940000165617	ENSGT00940000157232	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
Poecilia	ANCESTRAL SPECIES	13	ENSGT01030000234607.B	ENSGT00940000158859.e	ENSGT00390000002753	ENSGT00940000163195.B.b	ENSGT00940000165617	ENSGT00940000157232	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
NAME_6	ANCESTRAL SPECIES	20	ENSGT01030000234607.B	ENSGT00940000158859.e	ENSGT00390000002753	ENSGT00940000163195.B.b	ENSGT00940000165617	ENSGT00940000157232	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Amazon molly	MODERN SPECIES	268	fastkd1 (ENSPFOG00000009118)	klhl41a (ENSPFOG00000008939)	bbs5 (ENSPFOG00000023425)	col28a2a (ENSPFOG00000008550)	zgc:172182 (ENSPFOG00000022400)	lrp2a (ENSPFOG00000024453)	RAP2A (ENSPFOG00000008541)	MBNL2 (ENSPFOG00000008432) #14	HS6ST3 (ENSPFOG00000008412) #16	UGGT2 (ENSPFOG00000007063) #17	dnajc3a (ENSPFOG00000006914)	CLDN10 (ENSPFOG00000006890) #20	ENSPFOG00000006872	cldn10b (ENSPFOG00000006774) #20	ABCC4 (ENSPFOG00000006221) #21	sox21b (ENSPFOG00000020152) #22	dct (ENSPFOG00000006048) #25	gpc6b (ENSPFOG00000005787) ##26	FASTKD5 (ENSPFOG00000020151)	ENSPFOG00000020148	PCDH17 (ENSPFOG00000005707)	pcdh8 (ENSPFOG00000005676)	PCDH8 (ENSPFOG00000005654)	cnmd (ENSPFOG00000005599)	EDNRB (ENSPFOG00000005408)	ENSPFOG00000023532	cog3 (ENSPFOG00000004998)	MID1 (ENSPFOG00000004748)	ARHGAP6 (ENSPFOG00000004654)	FRMPD4 (ENSPFOG00000004379)	TLR7 (ENSPFOG00000023980)
Sailfin molly	MODERN SPECIES	37	fastkd1 (ENSPLAG00000000642)	klhl41a (ENSPLAG00000020642)	bbs5 (ENSPLAG00000020800)	col28a2a (ENSPLAG00000020978)	zgc:172182 (ENSPLAG00000021037)	lrp2a (ENSPLAG00000021224)	RAP2A (ENSPLAG00000021245)	MBNL2 (ENSPLAG00000021820) #14	HS6ST3 (ENSPLAG00000021998) #16	UGGT2 (ENSPLAG00000000783) #17	dnajc3a (ENSPLAG00000022167)	CLDN10 (ENSPLAG00000022192) #20	ENSPLAG00000022198	cldn10b (ENSPLAG00000022224) #20	ABCC4 (ENSPLAG00000022274) #21	sox21b (ENSPLAG00000022288) #22	dct (ENSPLAG00000022306) #25	gpc6b (ENSPLAG00000022332) ##26	FASTKD5 (ENSPLAG00000022347)	ENSPLAG00000022353	PCDH17 (ENSPLAG00000022370)	pcdh8 (ENSPLAG00000022381)	PCDH8 (ENSPLAG00000022394)	cnmd (ENSPLAG00000022420)	EDNRB (ENSPLAG00000022446)	cog3 (ENSPLAG00000022471)	MID1 (ENSPLAG00000022490)	ARHGAP6 (ENSPLAG00000022665)	FRMPD4 (ENSPLAG00000022718)	TLR7 (ENSPLAG00000022756)	ENSPLAG00000022771
Guppy	MODERN SPECIES	450	fastkd1 (ENSPREG00000003336)	klhl41a (ENSPREG00000003309)	bbs5 (ENSPREG00000003175)	col28a2a (ENSPREG00000003127)	zgc:172182 (ENSPREG00000003107)	lrp2a (ENSPREG00000002967)	RAP2A (ENSPREG00000002833)	MBNL2 (ENSPREG00000002740) #14	HS6ST3 (ENSPREG00000002663) #16	UGGT2 (ENSPREG00000002513) #17	dnajc3a (ENSPREG00000002469)	CLDN10 (ENSPREG00000002447) #20	ENSPREG00000002428	cldn10b (ENSPREG00000002421) #20	ABCC4 (ENSPREG00000002368) #21	sox21b (ENSPREG00000002355) #22	dct (ENSPREG00000002309) #25	gpc6b (ENSPREG00000002269) ##26	FASTKD5 (ENSPREG00000002221)	ENSPREG00000002212	PCDH17 (ENSPREG00000002198)	pcdh8 (ENSPREG00000002188)	PCDH8 (ENSPREG00000002178)	cnmd (ENSPREG00000002170)	EDNRB (ENSPREG00000002120)	ENSPREG00000002105	ENSPREG00000002097	cog3 (ENSPREG00000002026)	MID1 (ENSPREG00000001993)	ARHGAP6 (ENSPREG00000001959)	FRMPD4 (ENSPREG00000001939)
Platyfish	MODERN SPECIES	21	ENSXMAG00000004744	ENSXMAG00000027418	ENSXMAG00000023704	ENSXMAG00000028006	ENSXMAG00000021938	RAP2A (ENSXMAG00000027431)	MBNL2 (ENSXMAG00000004712) #14	HS6ST3 (ENSXMAG00000004707) #16	UGGT2 (ENSXMAG00000004647) #17	dnajc3a (ENSXMAG00000004627)	CLDN10 (ENSXMAG00000004626) #20	ENSXMAG00000004620	cldn10b (ENSXMAG00000004602) #20	ENSXMAG00000027812	ABCC4 (ENSXMAG00000003402) #21	sox21b (ENSXMAG00000019573) #22	dct (ENSXMAG00000004570) #25	gpc6b (ENSXMAG00000004551) ##26	FASTKD5 (ENSXMAG00000019572)	ENSXMAG00000019571	PCDH17 (ENSXMAG00000004547)	pcdh8 (ENSXMAG00000004545)	PCDH8 (ENSXMAG00000004542)	cnmd (ENSXMAG00000004534)	EDNRB (ENSXMAG00000004509)	cog3 (ENSXMAG00000004482)	MID1 (ENSXMAG00000004459)	ENSXMAG00000022196	FRMPD4 (ENSXMAG00000004435)	TLR7 (ENSXMAG00000004434)	TLR8 (ENSXMAG00000004433)
NAME_4	ANCESTRAL SPECIES	94	ENSGT01030000234607.B	ENSGT00940000158859.e	ENSGT00390000002753	ENSGT00940000163195.B.b	ENSGT00940000165617	ENSGT00940000157232	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
Mummichog	MODERN SPECIES	2311	ENSFHEG00000003143	fastkd1 (ENSFHEG00000023142)	klhl41a (ENSFHEG00000023073)	bbs5 (ENSFHEG00000023025)	col28a2a (ENSFHEG00000022953)	zgc:172182 (ENSFHEG00000022846)	lrp2a (ENSFHEG00000022802)	RAP2A (ENSFHEG00000022604)	HS6ST3 (ENSFHEG00000022598) #16	UGGT2 (ENSFHEG00000022580) #17	dnajc3a (ENSFHEG00000022460)	CLDN10 (ENSFHEG00000022356) #20	ENSFHEG00000022336	cldn10b (ENSFHEG00000022324) #20	ABCC4 (ENSFHEG00000022300) #21	sox21b (ENSFHEG00000000544) #22	dct (ENSFHEG00000022092) #25	gpc6b (ENSFHEG00000022052) ##26	FASTKD5 (ENSFHEG00000022018)	ENSFHEG00000022007	PCDH17 (ENSFHEG00000021950)	pcdh8 (ENSFHEG00000021921)	PCDH8 (ENSFHEG00000021904)	cnmd (ENSFHEG00000021880)	EDNRB (ENSFHEG00000021800)	ENSFHEG00000021694	ENSFHEG00000021686	cog3 (ENSFHEG00000021672)	MID1 (ENSFHEG00000021527)	ENSFHEG00000021349	FRMPD4 (ENSFHEG00000021338)
Sheepshead minnow	MODERN SPECIES	480												CLDN10 (ENSCVAG00000011621) #20	ENSCVAG00000011606	cldn10b (ENSCVAG00000000927) #20	ABCC4 (ENSCVAG00000011591) #21	sox21b (ENSCVAG00000011521) #22	dct (ENSCVAG00000011516) #25	gpc6b (ENSCVAG00000011479) ##26	FASTKD5 (ENSCVAG00000011433)	ENSCVAG00000011413	PCDH17 (ENSCVAG00000011405)	pcdh8 (ENSCVAG00000011400)	PCDH8 (ENSCVAG00000011395)	cnmd (ENSCVAG00000000302)	ENSCVAG00000011347	EDNRB (ENSCVAG00000011337)	cog3 (ENSCVAG00000011309)	ENSCVAG00000011186	ARHGAP6 (ENSCVAG00000011154)	FRMPD4 (ENSCVAG00000011140)
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT00940000178366	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Mangrove rivulus	MODERN SPECIES	66	ENSKMAG00000016397	INO80D (ENSKMAG00000016425)	STK24 (ENSKMAG00000016478) #10	SLC15A1 (ENSKMAG00000016526) #8	DOCK9 (ENSKMAG00000016587) #7	ENSKMAG00000016675	FARP1 (ENSKMAG00000016718) #11	RAP2A (ENSKMAG00000016852)	MBNL2 (ENSKMAG00000016876) #14	HS6ST3 (ENSKMAG00000016929) #16	UGGT2 (ENSKMAG00000016954) #17	dnajc3a (ENSKMAG00000017051)	CLDN10 (ENSKMAG00000017086) #20	ENSKMAG00000017103	cldn10b (ENSKMAG00000017117) #20	sox21b (ENSKMAG00000017132) #22	dct (ENSKMAG00000017141) #25	gpc6b (ENSKMAG00000017161) ##26	FASTKD5 (ENSKMAG00000017190)	ENSKMAG00000017197	PCDH17 (ENSKMAG00000017201)	pcdh8 (ENSKMAG00000017212)	PCDH8 (ENSKMAG00000017219)	cnmd (ENSKMAG00000017228)	EDNRB (ENSKMAG00000017239)	cog3 (ENSKMAG00000017271)	MID1 (ENSKMAG00000017363)	ARHGAP6 (ENSKMAG00000017427)	FRMPD4 (ENSKMAG00000017482)	TLR7 (ENSKMAG00000017558)	TLR8 (ENSKMAG00000017578)
Turquoise killifish	MODERN SPECIES	1623	GPR1 (ENSNFUG00015018878)	INO80D (ENSNFUG00015018830)	STK24 (ENSNFUG00015018815) #10	SLC15A1 (ENSNFUG00015014013) #8	DOCK9 (ENSNFUG00015013408) #7	FARP1 (ENSNFUG00015013218) #11	RAP2A (ENSNFUG00015013191)	MBNL2 (ENSNFUG00015013182) #14	ENSNFUG00015013171	HS6ST3 (ENSNFUG00015013169) #16	UGGT2 (ENSNFUG00015011587) #17	dnajc3a (ENSNFUG00015011416)	CLDN10 (ENSNFUG00015010185) #20	ENSNFUG00015010176	cldn10b (ENSNFUG00015010152) #20	SOX21B (ENSNFUG00015010144) #22	GPC6 (ENSNFUG00015009920) ##26	FASTKD5 (ENSNFUG00015009900)	ENSNFUG00015009897	PCDH17 (ENSNFUG00015009890)	PCDH8 (ENSNFUG00015009877)	cnmd (ENSNFUG00015009867)	EDNRB (ENSNFUG00015009852)	PCDH8 (ENSNFUG00015009545)	Nfu_g_1_017579 (ENSNFUG00015009434)	ARHGAP6 (ENSNFUG00015009347)	TLR7 (ENSNFUG00015009312)	TLR7 (ENSNFUG00015009290)	TLR8 (ENSNFUG00015009237)	ENSNFUG00015009214	EGFL6 (ENSNFUG00015009194)
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00940000153514.b.m.a	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Zig-zag eel	MODERN SPECIES	13	NDUFS1 (ENSMAMG00000006691)	INO80D (ENSMAMG00000006745)	STK24 (ENSMAMG00000006753) #10	ENSMAMG00000006800 #8	DOCK9 (ENSMAMG00000012139) #7	FARP1 (ENSMAMG00000012245) #11	RAP2A (ENSMAMG00000012424)	MBNL2 (ENSMAMG00000012429) #14	HS6ST3 (ENSMAMG00000012457) #16	UGGT2 (ENSMAMG00000012582) #17	ENSMAMG00000012678	CLDN10 (ENSMAMG00000012710) #20	ENSMAMG00000012726	cldn10b (ENSMAMG00000012738) #20	ABCC4 (ENSMAMG00000012798) #21	sox21b (ENSMAMG00000012843) #22	dct (ENSMAMG00000012848) #25	gpc6b (ENSMAMG00000012874) ##26	ENSMAMG00000012918	ENSMAMG00000012925	ENSMAMG00000012927	ENSMAMG00000026393	cnmd (ENSMAMG00000012958)	ENSMAMG00000013038	cog3 (ENSMAMG00000013056)	MID1 (ENSMAMG00000013142)	ARHGAP6 (ENSMAMG00000013208)	FRMPD4 (ENSMAMG00000013252)	TLR7 (ENSMAMG00000013382)	TLR8 (ENSMAMG00000013389)	ENSMAMG00000013433
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00940000153514.b.m.a	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Climbing perch	MODERN SPECIES	12	CMKLR2 (ENSATEG00000014960)	NDUFS1 (ENSATEG00000014830)	INO80D (ENSATEG00000014792)	STK24 (ENSATEG00000014774) #10	ENSATEG00000014517 #8	DOCK9 (ENSATEG00000014377) #7	FARP1 (ENSATEG00000014315) #11	RAP2A (ENSATEG00000014298)	MBNL2 (ENSATEG00000014258) #14	HS6ST3 (ENSATEG00000014168) #16	UGGT2 (ENSATEG00000014032) #17	ENSATEG00000013990	CLDN10 (ENSATEG00000013981) #20	ENSATEG00000013974	cldn10b (ENSATEG00000013956) #20	sox21b (ENSATEG00000013931) #22	dct (ENSATEG00000013910) #25	gpc6b (ENSATEG00000013874) ##26	ENSATEG00000013855	ENSATEG00000013852	ENSATEG00000013836	pcdh8 (ENSATEG00000013810)	ENSATEG00000013802	cnmd (ENSATEG00000013788)	ENSATEG00000013765	ENSATEG00000025192	cog3 (ENSATEG00000013694)	ENSATEG00000013645	ARHGAP6 (ENSATEG00000013542)	FRMPD4 (ENSATEG00000013488)	ENSATEG00000013474
Siamese fighting fish	MODERN SPECIES	11	INO80D (ENSBSLG00000025979)	STK24 (ENSBSLG00000025966) #10	SLC15A1 (ENSBSLG00000025555) #8	ENSBSLG00000025293	DOCK9 (ENSBSLG00000024853) #7	FARP1 (ENSBSLG00000024508) #11	RAP2A (ENSBSLG00000024472)	MBNL2 (ENSBSLG00000024428) #14	HS6ST3 (ENSBSLG00000024404) #16	UGGT2 (ENSBSLG00000023963) #17	dnajc3a (ENSBSLG00000023572)	CLDN10 (ENSBSLG00000023544) #20	ENSBSLG00000023527	cldn10b (ENSBSLG00000023465) #20	ABCC4 (ENSBSLG00000022904) #21	sox21b (ENSBSLG00000022829) #22	dct (ENSBSLG00000022805) #25	gpc6b (ENSBSLG00000022567) ##26	FASTKD5 (ENSBSLG00000022558)	ENSBSLG00000022555	PCDH17 (ENSBSLG00000022549)	pcdh8 (ENSBSLG00000022534)	PCDH8 (ENSBSLG00000022530)	cnmd (ENSBSLG00000022505)	EDNRB (ENSBSLG00000022367)	cog3 (ENSBSLG00000021439)	ENSBSLG00000021134	ARHGAP6 (ENSBSLG00000020079)	FRMPD4 (ENSBSLG00000019847)	TLR7 (ENSBSLG00000019814)	ENSBSLG00000019806
Carangaria	ANCESTRAL SPECIES	12	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g
Seriola	ANCESTRAL SPECIES	6	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT01060000251321	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771
Greater amberjack	MODERN SPECIES	21	INO80D (ENSSDUG00000000981)	STK24 (ENSSDUG00000000992) #10	SLC15A1 (ENSSDUG00000001105) #8	DOCK9 (ENSSDUG00000001909) #7	ENSSDUG00000002054	FARP1 (ENSSDUG00000002084) #11	RAP2A (ENSSDUG00000002226)	MBNL2 (ENSSDUG00000002243) #14	HS6ST3 (ENSSDUG00000002285) #16	UGGT2 (ENSSDUG00000002365) #17	dnajc3a (ENSSDUG00000002462)	CLDN10 (ENSSDUG00000002498) #20	ENSSDUG00000002515	CLDN10 (ENSSDUG00000002534) #20	ABCC4 (ENSSDUG00000002547) #21	sox21b (ENSSDUG00000002603) #22	dct (ENSSDUG00000002612) #25	gpc6b (ENSSDUG00000002634) ##26	FASTKD5 (ENSSDUG00000002683)	ENSSDUG00000002696	PCDH17 (ENSSDUG00000002704)	pcdh8 (ENSSDUG00000002722)	PCDH8 (ENSSDUG00000002742)	cnmd (ENSSDUG00000002769)	EDNRB (ENSSDUG00000002849)	cog3 (ENSSDUG00000002945)	MID1 (ENSSDUG00000003006)	ARHGAP6 (ENSSDUG00000003092)	FRMPD4 (ENSSDUG00000003192)	TLR7 (ENSSDUG00000003235)	TLR8 (ENSSDUG00000003256)
Yellowtail amberjack	MODERN SPECIES	2951					ENSSLDG00000002505 #7	ENSSLDG00000002486	FARP1 (ENSSLDG00000002332) #11	RAP2A (ENSSLDG00000002307)	MBNL2 (ENSSLDG00000002279) #14	HS6ST3 (ENSSLDG00000002262) #16	UGGT2 (ENSSLDG00000002082) #17	dnajc3a (ENSSLDG00000002016)	CLDN10 (ENSSLDG00000001932) #20	CLDN10 (ENSSLDG00000001892) #20	ABCC4 (ENSSLDG00000001735) #21	sox21b (ENSSLDG00000001678) #22	dct (ENSSLDG00000001631) #25	gpc6b (ENSSLDG00000001569) ##26	FASTKD5 (ENSSLDG00000001504)	ENSSLDG00000001496	PCDH17 (ENSSLDG00000001483)	ENSSLDG00000001451	pcdh8 (ENSSLDG00000001431)	cnmd (ENSSLDG00000001428)	EDNRB (ENSSLDG00000001281)	ENSSLDG00000001250	MID1 (ENSSLDG00000001224)	ARHGAP6 (ENSSLDG00000001083)	FRMPD4 (ENSSLDG00000000996)	TLR7 (ENSSLDG00000000923)	ENSSLDG00000000906
Barramundi perch	MODERN SPECIES	45	NDUFS1 (ENSLCAG00010027468)	ENSLCAG00010027442	INO80D (ENSLCAG00010027439)	STK24 (ENSLCAG00010027429) #10	SLC15A1 (ENSLCAG00010027270) #8	DOCK9 (ENSLCAG00010026623) #7	FARP1 (ENSLCAG00010026250) #11	RAP2A (ENSLCAG00010026229)	MBNL2 (ENSLCAG00010026224) #14	HS6ST3 (ENSLCAG00010026217) #16	UGGT2 (ENSLCAG00010026068) #17	dnajc3a (ENSLCAG00010026005)	CLDN10 (ENSLCAG00010026004) #20	CLDN10 (ENSLCAG00010026003) #20	ABCC4 (ENSLCAG00010025978) #21	sox21b (ENSLCAG00010025962) #22
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000176946.a	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Tongue sole	MODERN SPECIES	7	ENSCSEG00000005260	ranbp1 (ENSCSEG00000005264)	ENSCSEG00000005270	ing1 (ENSCSEG00000005294)	ube2al (ENSCSEG00000005296)	ankrd10b (ENSCSEG00000005304)	sik1 (ENSCSEG00000005307)	HS6ST3 (ENSCSEG00000005316) #16	UGGT2 (ENSCSEG00000005327) #17	dnajc3a (ENSCSEG00000005383)	CLDN10 (ENSCSEG00000005389) #20	ENSCSEG00000005396	CLDN10 (ENSCSEG00000005397) #20	ABCC4 (ENSCSEG00000005402) #21	ENSCSEG00000005420	sox21b (ENSCSEG00000005421) #22	ITGA6 (ENSCSEG00000005423)	NUP62 (ENSCSEG00000005439)	PDK1 (ENSCSEG00000005442)	ENSCSEG00000005448	RAPGEF4 (ENSCSEG00000005460)	ENSCSEG00000005475	cdca7a (ENSCSEG00000005485)	sp3a (ENSCSEG00000005494)	OLA1 (ENSCSEG00000005504)	sp9 (ENSCSEG00000005525)	CIR1 (ENSCSEG00000005531)	scrn3 (ENSCSEG00000005538)	GPR155 (ENSCSEG00000005546)	CHRNA1 (ENSCSEG00000005556)	ENSCSEG00000005562
Turbot	MODERN SPECIES	5	INO80D (ENSSMAG00000015863)	STK24 (ENSSMAG00000015903) #10	ENSSMAG00000015951 #8	DOCK9 (ENSSMAG00000015986) #7	ENSSMAG00000016062	FARP1 (ENSSMAG00000016077) #11	RAP2A (ENSSMAG00000025568)	MBNL2 (ENSSMAG00000016268) #14	HS6ST3 (ENSSMAG00000024124) #16	UGGT2 (ENSSMAG00000016364) #17	ENSSMAG00000016446	CLDN10 (ENSSMAG00000016492) #20	ENSSMAG00000016539	cldn10b (ENSSMAG00000025137) #20	ABCC4 (ENSSMAG00000016556) #21	sox21b (ENSSMAG00000016669) #22	dct (ENSSMAG00000016674) #25	gpc6b (ENSSMAG00000016737) ##26	ENSSMAG00000016863	ENSSMAG00000016864	ENSSMAG00000016867	pcdh8 (ENSSMAG00000016897)	ENSSMAG00000016921	cnmd (ENSSMAG00000016931)	ENSSMAG00000016972	cog3 (ENSSMAG00000017095)	MID1 (ENSSMAG00000017193)	ARHGAP6 (ENSSMAG00000017263)	FRMPD4 (ENSSMAG00000017320)	tlr8 (ENSSMAG00000017362)	ENSSMAG00000017384
Eupercaria	ANCESTRAL SPECIES	18	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00940000153514.b.m.a	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00930000150973.A	ENSGT00940000158619.o
Fugu	MODERN SPECIES		CMKLR2 (ENSTRUG00000017415)	NDUFS1 (ENSTRUG00000017410)	INO80D (ENSTRUG00000017409)	ENSTRUG00000017397 #10	DOCK9 (ENSTRUG00000017366) #7	FARP1 (ENSTRUG00000017356) #11	RAP2A (ENSTRUG00000026484)	MBNL2 (ENSTRUG00000017351) #14	HS6ST3 (ENSTRUG00000002194) #16	UGGT2 (ENSTRUG00000002530) #17	dnajc3a (ENSTRUG00000003410)	CLDN10 (ENSTRUG00000004065) #20	ENSTRUG00000029434	CLDN10 (ENSTRUG00000004199) #20	ABCC4 (ENSTRUG00000004390) #21	sox21b (ENSTRUG00000005725) #22	Dct (ENSTRUG00000005764) #25	gpc6b (ENSTRUG00000006104) ##26	FASTKD5 (ENSTRUG00000022056)	ENSTRUG00000024536	PCDH17 (ENSTRUG00000030227)	pcdh8 (ENSTRUG00000006775)	PCDH8 (ENSTRUG00000006867)	ENSTRUG00000022523	EDNRB (ENSTRUG00000007046)	cog3 (ENSTRUG00000007384)	ARHGAP6 (ENSTRUG00000007877)	FRMPD4 (ENSTRUG00000020392)	TLR7 (ENSTRUG00000008051)	ENSTRUG00000028268	ENSTRUG00000026067
Eupecaria_A	ANCESTRAL SPECIES	18	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
Eupecaria_B	ANCESTRAL SPECIES	18	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000155232.t.b.b #20	ENSGT00940000166809	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
Perciformes	ANCESTRAL SPECIES	20	ENSGT00940000153514.b.m.a	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b.f #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Cottioidei	ANCESTRAL SPECIES	14	ENSGT00940000153514.b.m.a	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b.f #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Lumpfish	MODERN SPECIES	13	INO80D (ENSCLMG00005019041)	STK24 (ENSCLMG00005018957) #10	SLC15A1 (ENSCLMG00005018954) #8	DOCK9 (ENSCLMG00005010444) #7	FARP1 (ENSCLMG00005009389) #11	RAP2A (ENSCLMG00005009380)	MBNL2 (ENSCLMG00005009379) #14	HS6ST3 (ENSCLMG00005009364) #16	UGGT2 (ENSCLMG00005009188) #17	ENSCLMG00005009179 #17	dnajc3a (ENSCLMG00005009174)	CLDN10 (ENSCLMG00005009173) #20	CLDN10 (ENSCLMG00005009171) #20	CLDN10 (ENSCLMG00005009170) #20	ABCC4 (ENSCLMG00005008137) #21	sox21b (ENSCLMG00005008116) #22	dct (ENSCLMG00005008066) #25	gpc6b (ENSCLMG00005007681) ##26	FASTKD5 (ENSCLMG00005007677)	ENSCLMG00005015937	PCDH17 (ENSCLMG00005015926)	pcdh8 (ENSCLMG00005015924)	PCDH8 (ENSCLMG00005015875)	cnmd (ENSCLMG00005015836)	EDNRB (ENSCLMG00005015835)	cog3 (ENSCLMG00005015821)	MID1 (ENSCLMG00005015698)	ARHGAP6 (ENSCLMG00005015489)	FRMPD4 (ENSCLMG00005015487)	TLR7 (ENSCLMG00005015486)	TLR8 (ENSCLMG00005015482)
Stickleback	MODERN SPECIES	16	CMKLR2 (ENSGACG00000004337)	NDUFS1 (ENSGACG00000004321)	INO80D (ENSGACG00000004314)	STK24 (ENSGACG00000004299) #10	SLC15A1 (ENSGACG00000004265) #8	DOCK9 (ENSGACG00000004237) #7	FARP1 (ENSGACG00000004228) #11	MBNL2 (ENSGACG00000004222) #14	HS6ST3 (ENSGACG00000004221) #16	UGGT2 (ENSGACG00000004189) #17	dnajc3a (ENSGACG00000004166)	CLDN10 (ENSGACG00000004162) #20	ENSGACG00000004159	CLDN10 (ENSGACG00000004153) #20	ABCC4 (ENSGACG00000004126) #21	sox21b (ENSGACG00000004124) #22	dct (ENSGACG00000004101) #25	gpc6b (ENSGACG00000004082) ##26	ENSGACG00000004078	ENSGACG00000004074	PCDH17 (ENSGACG00000004069)	pcdh8 (ENSGACG00000004062)	PCDH8 (ENSGACG00000004057)	ENSGACG00000004056	EDNRB (ENSGACG00000004048)	cog3 (ENSGACG00000004046)	cog3 (ENSGACG00000004045)	MID1 (ENSGACG00000004031)	ARHGAP6 (ENSGACG00000004025)	FRMPD4 (ENSGACG00000004014)	TLR7 (ENSGACG00000003996)
Perciformes_a	ANCESTRAL SPECIES	21	ENSGT00940000153514.b.m.a	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b.f #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000155232.t.b.b #20	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a	ENSGT00940000159771	ENSGT00940000160879
Channel bull blenny	MODERN SPECIES	13	NDUFS1 (ENSCGOG00000006001)	INO80D (ENSCGOG00000005996)	STK24 (ENSCGOG00000005844) #10	SLC15A1 (ENSCGOG00000005836) #8	DOCK9 (ENSCGOG00000004936) #7	FARP1 (ENSCGOG00000003665) #11	RAP2A (ENSCGOG00000003614)	MBNL2 (ENSCGOG00000003597) #14	HS6ST3 (ENSCGOG00000003596) #16	UGGT2 (ENSCGOG00000003453) #17	dnajc3a (ENSCGOG00000002877)	CLDN10 (ENSCGOG00000002841) #20	cldn10b (ENSCGOG00000002739) #20	CLDN10 (ENSCGOG00000002695) #20	ABCC4 (ENSCGOG00000022636) #21	sox21b (ENSCGOG00000022583) #22	dct (ENSCGOG00000022578) #25	gpc6b (ENSCGOG00000022509) ##26	ENSCGOG00000022500	PCDH17 (ENSCGOG00000022499)	pcdh8 (ENSCGOG00000022498)	PCDH8 (ENSCGOG00000022497)	cnmd (ENSCGOG00000022496)	EDNRB (ENSCGOG00000022493)	cog3 (ENSCGOG00000022399)	MID1 (ENSCGOG00000022376)	ARHGAP6 (ENSCGOG00000022334)	FRMPD4 (ENSCGOG00000022313)	TLR7 (ENSCGOG00000022310)	TLR8 (ENSCGOG00000022306)	ENSCGOG00000022302
Pike perch	MODERN SPECIES	1	SLC15A1 (ENSSLUG00000007711) #8	DOCK9 (ENSSLUG00000002213) #7	FARP1 (ENSSLUG00000001193) #11	RAP2A (ENSSLUG00000001081)	MBNL2 (ENSSLUG00000001074) #14	HS6ST3 (ENSSLUG00000001060) #16	UGGT2 (ENSSLUG00000000968) #17	dnajc3a (ENSSLUG00000000804)	CLDN10 (ENSSLUG00000000737) #20	CLDN10 (ENSSLUG00000000728) #20	CLDN10 (ENSSLUG00000000724) #20	CLDN10 (ENSSLUG00000000719) #20	CLDN10 (ENSSLUG00000000702) #20	CLDN10 (ENSSLUG00000000696) #20	ABCC4 (ENSSLUG00000000657) #21	sox21b (ENSSLUG00000000636) #22	dct (ENSSLUG00000000626) #25	gpc6b (ENSSLUG00000000608) ##26	ENSSLUG00000000601	ENSSLUG00000000599	PCDH17 (ENSSLUG00000000591)	pcdh8 (ENSSLUG00000000586)	PCDH8 (ENSSLUG00000000578)	cnmd (ENSSLUG00000000573)	EDNRB (ENSSLUG00000000570)	cog3 (ENSSLUG00000000549)	MID1 (ENSSLUG00000000497)	ARHGAP6 (ENSSLUG00000000415)	FRMPD4 (ENSSLUG00000000384)	TLR7 (ENSSLUG00000000373)	TLR8 (ENSSLUG00000000367)
Eupecaria_C	ANCESTRAL SPECIES	21	ENSGT00940000153514.b.m.a	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000155232.t.b.b #20	ENSGT00940000155232.s #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	18	ENSGT00940000153514.b.m.a	ENSGT00940000157974	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856 #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT01030000234607.A.a.b.b	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00940000153655.A.a.b	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g	ENSGT00950000183035.a.b.a
European seabass	MODERN SPECIES	5	NDUFS1 (ENSDLAG00005009594)	INO80D (ENSDLAG00005030557)	STK24 (ENSDLAG00005010485) #10	ENSDLAG00005010823 #8	DOCK9 (ENSDLAG00005012371) #7	FARP1 (ENSDLAG00005023084) #11	RAP2A (ENSDLAG00005026902)	MBNL2 (ENSDLAG00005024282) #14	HS6ST3 (ENSDLAG00005024312) #16	UGGT2 (ENSDLAG00005024334) #17	ENSDLAG00005030044	CLDN10 (ENSDLAG00005024588) #20	ENSDLAG00005024593	CLDN10 (ENSDLAG00005024596) #20	ABCC4 (ENSDLAG00005024671) #21	sox21b (ENSDLAG00005029254) #22	dct (ENSDLAG00005025147) #25	gpc6b (ENSDLAG00005025160) ##26	ENSDLAG00005025189	ENSDLAG00005033559	ENSDLAG00005025192	pcdh8 (ENSDLAG00005025209)	ENSDLAG00005025212	cnmd (ENSDLAG00005025213)	ENSDLAG00005025224	ENSDLAG00005025228	cog3 (ENSDLAG00005025235)	FRMPD4 (ENSDLAG00005025388)	ENSDLAG00005025338	ARHGAP6 (ENSDLAG00005025349)	ENSDLAG00005025394
Large yellow croaker	MODERN SPECIES	490	NDUFS1 (ENSLCRG00005021709)	INO80D (ENSLCRG00005021775)	STK24 (ENSLCRG00005021776) #10	SLC15A1 (ENSLCRG00005021809) #8	DOCK9 (ENSLCRG00005022345) #7	FARP1 (ENSLCRG00005023407) #11	ENSLCRG00005023418	MBNL2 (ENSLCRG00005023419) #14	HS6ST3 (ENSLCRG00005023422) #16	UGGT2 (ENSLCRG00005023426) #17	dnajc3a (ENSLCRG00005023428)	CLDN10 (ENSLCRG00005023430) #20	ENSLCRG00005023431	cldn10b (ENSLCRG00005023432) #20	ABCC4 (ENSLCRG00005023442) #21	sox21b (ENSLCRG00005023473) #22	dct (ENSLCRG00005023474) #25	gpc6b (ENSLCRG00005023475) ##26	FASTKD5 (ENSLCRG00005023478)	ENSLCRG00005023480	PCDH17 (ENSLCRG00005023481)	pcdh8 (ENSLCRG00005023483)	PCDH8 (ENSLCRG00005023484)	cnmd (ENSLCRG00005023485)	EDNRB (ENSLCRG00005023486)	ENSLCRG00005010144	ENSLCRG00005010146	cog3 (ENSLCRG00005010155)	MID1 (ENSLCRG00005010240)	ARHGAP6 (ENSLCRG00005010298)	FRMPD4 (ENSLCRG00005010330)
Gilthead seabream	MODERN SPECIES	23	INO80D (ENSSAUG00010021382)	STK24 (ENSSAUG00010021366) #10	SLC15A1 (ENSSAUG00010014675) #8	DOCK9 (ENSSAUG00010013677) #7	FARP1 (ENSSAUG00010013566) #11	RAP2A (ENSSAUG00010013559)	MBNL2 (ENSSAUG00010013556) #14	HS6ST3 (ENSSAUG00010013554) #16	UGGT2 (ENSSAUG00010008126) #17	dnajc3a (ENSSAUG00010007791)	CLDN10 (ENSSAUG00010007773) #20	cldn10b (ENSSAUG00010007753) #20	ENSSAUG00010007749	CLDN10 (ENSSAUG00010007744) #20	ABCC4 (ENSSAUG00010001969) #21	sox21b (ENSSAUG00010001855) #22	dct (ENSSAUG00010001836) #25	gpc6b (ENSSAUG00010001806) ##26	FASTKD5 (ENSSAUG00010001778)	ENSSAUG00010001775	PCDH17 (ENSSAUG00010001769)	pcdh8 (ENSSAUG00010001765)	PCDH8 (ENSSAUG00010001759)	cnmd (ENSSAUG00010001754)	EDNRB (ENSSAUG00010001739)	cog3 (ENSSAUG00010001431)	MID1 (ENSSAUG00010001349)	ARHGAP6 (ENSSAUG00010001298)	FRMPD4 (ENSSAUG00010001294)	TLR7 (ENSSAUG00010015548)	TLR8 (ENSSAUG00010015546)
Cod	MODERN SPECIES	12	NDUFS1 (ENSGMOG00000007796)	INO80D (ENSGMOG00000007794)	STK24 (ENSGMOG00000007789) #10	ENSGMOG00000007774 #8	DOCK9 (ENSGMOG00000007760) #7	FARP1 (ENSGMOG00000009298) #11	RAP2A (ENSGMOG00000002838)	MBNL2 (ENSGMOG00000002161) #14	HS6ST3 (ENSGMOG00000002150) #16	UGGT2 (ENSGMOG00000002073) #17	ENSGMOG00000002042	ENSGMOG00000022365 #20	ENSGMOG00000002016	CLDN10 (ENSGMOG00000031658) #20	ENSGMOG00000001948 #21	ENSGMOG00000019987 #22	ENSGMOG00000031730 ##26	ENSGMOG00000001901	ENSGMOG00000001894	pcdh8 (ENSGMOG00000029686)	ENSGMOG00000001867	ENSGMOG00000035653	cnmd (ENSGMOG00000001855)	cog3 (ENSGMOG00000001829)	ENSGMOG00000001792	ENSGMOG00000029983	ENSGMOG00000029223	ENSGMOG00000028618	ENSGMOG00000024345	ENSGMOG00000026761	ENSGMOG00000033206
Protacanthopterygii	ANCESTRAL SPECIES	18	ENSGT00940000153476.b.o.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B #7	ENSGT00940000155318.b.a.b #11	ENSGT00940000160594.g.a	ENSGT00950000182897.B.a.b.b.a #14	ENSGT01030000234621.F.d #15	ENSGT00950000183071.a.a.a.e.a #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a #20	ENSGT00940000155232.s #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795 #22	ENSGT00940000156856.c #25	ENSGT01050000244897.a.b.b.a.a ##26	ENSGT00940000158589.b.a	ENSGT00390000003874.a.a	ENSGT00940000162556.A.b	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00390000016151	ENSGT00510000049102	ENSGT00940000160532.h	ENSGT00390000013151.a.a.b	ENSGT00940000160639.b.a.b.b.b	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	7	ENSGT00940000157974.d	ENSGT00940000153476.b.o.a.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B.bb #7	ENSGT00940000155318.b.a.b.c #11	ENSGT00940000160594.g.a.a	ENSGT00950000182897.B.a.b.b.a.a #14	ENSGT01030000234621.F.d #15	ENSGT00950000183071.a.a.a.e.a.b #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a.l #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b.d.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795.e #22	ENSGT00940000156856.d #25	ENSGT01050000244897.a.b.b.a.a.f ##26	ENSGT00940000158589.b.a	ENSGT00940000158449.f	ENSGT00390000003874.a.a.b	ENSGT00950000182836.b.b.b.a.k.a	ENSGT01090000259985.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00940000154486.b.b.a.b.b	ENSGT00940000154486.b.a.a.b.e.a.a.a.d	ENSGT00390000016151.g	ENSGT00940000160532.h.c.a	ENSGT00940000160532.h.c.b	ENSGT00390000013151.a.a.b.c	ENSGT00940000160639.b.a.b.b.b.a
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000157974.d	ENSGT00940000153476.b.o.a.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B.bb #7	ENSGT00940000155318.b.a.b.c #11	ENSGT00940000160594.g.a.a	ENSGT00950000182897.B.a.b.b.a.a #14	ENSGT01030000234621.F.d #15	ENSGT00950000183071.a.a.a.e.a.b #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a.l #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b.d.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795.e #22	ENSGT00940000156856.d #25	ENSGT01050000244897.a.b.b.a.a.f ##26	ENSGT00940000158589.b.a	ENSGT00940000158449.f	ENSGT00390000003874.a.a.b	ENSGT00950000182836.b.b.b.a.k.a	ENSGT01090000259985.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00940000154486.b.b.a.b.b	ENSGT00940000154486.b.a.a.b.e.a.a.a.d	ENSGT00390000016151.g	ENSGT00940000160532.h.c.a	ENSGT00940000160532.h.c.b	ENSGT00390000013151.a.a.b.c	ENSGT00940000160639.b.a.b.b.b.a
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000157974.d	ENSGT00940000153476.b.o.a.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B.bb #7	ENSGT00940000155318.b.a.b.c #11	ENSGT00940000160594.g.a.a	ENSGT00950000182897.B.a.b.b.a.a #14	ENSGT01030000234621.F.d #15	ENSGT00950000183071.a.a.a.e.a.b #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a.l #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b.d.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795.e #22	ENSGT00940000156856.d #25	ENSGT01050000244897.a.b.b.a.a.f ##26	ENSGT00940000158589.b.a	ENSGT00940000158449.f	ENSGT00390000003874.a.a.b	ENSGT00950000182836.b.b.b.a.k.a	ENSGT01090000259985.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00940000154486.b.b.a.b.b	ENSGT00940000154486.b.a.a.b.e.a.a.a.d	ENSGT00390000016151.g	ENSGT00940000160532.h.c.a	ENSGT00940000160532.h.c.b	ENSGT00390000013151.a.a.b.c	ENSGT00940000160639.b.a.b.b.b.a
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00940000153476.b.o.a.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B.bb #7	ENSGT00940000176946.b	ENSGT00940000155318.b.a.b.c #11	ENSGT00940000160594.g.a.a	ENSGT00950000182897.B.a.b.b.a.a #14	ENSGT01030000234621.F.d #15	ENSGT00950000183071.a.a.a.e.a.b #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a.l #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b.d.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795.e #22	ENSGT00940000156856.d #25	ENSGT01050000244897.a.b.b.a.a.f ##26	ENSGT00940000158589.b.a	ENSGT00940000158449.f	ENSGT00390000003874.a.a.b	ENSGT00950000182836.b.b.b.a.k.a	ENSGT01090000259985.b.a.a.a.h	ENSGT01090000259985.b.a.a.a.g	ENSGT00940000162556.A.b	ENSGT00940000154486.b.b.a.b.b	ENSGT00940000154486.b.a.a.b.e.a.a.a.d	ENSGT00390000016151.g	ENSGT00940000160532.h.c.a	ENSGT00940000160532.h.c.b	ENSGT00390000013151.a.a.b.c
Coho salmon	MODERN SPECIES	11	INO80D (ENSOKIG00005025836)	STK24 (ENSOKIG00005025874) #10	SLC15A1 (ENSOKIG00005026269) #8	DOCK9 (ENSOKIG00005028370) #7	ENSOKIG00005030798	FARP1 (ENSOKIG00005030832) #11	RAP2A (ENSOKIG00005031425)	MBNL2 (ENSOKIG00005031458) #14	OXGR1 (ENSOKIG00005031560) #15	HS6ST3 (ENSOKIG00005031565) #16	UGGT2 (ENSOKIG00005031772) #17	dnajc3a (ENSOKIG00005036383)	ENSOKIG00005036780	cldn10b (ENSOKIG00005036788) #20	ABCC4 (ENSOKIG00005036926) #21	sox21b (ENSOKIG00005039048) #22	DCT (ENSOKIG00005039083) #25	gpc6b (ENSOKIG00005039314) ##26	TMPRSS3 (ENSOKIG00005039458)	ENSOKIG00005039511	pdxka (ENSOKIG00005039540)	agpat3 (ENSOKIG00005040043)	ENSOKIG00005040088	ENSOKIG00005040287	ENSOKIG00005040348	ENSOKIG00005040376	ENSOKIG00005040875	ndufa10 (ENSOKIG00005041173)	ENSOKIG00005041362	ENSOKIG00005043752	sh3bp4 (ENSOKIG00005046356)
Chinook salmon	MODERN SPECIES	22	hnrnpa3 (ENSOTSG00005018821)	nfe2l2a (ENSOTSG00005018824)	AGPS (ENSOTSG00005018847)	ENSOTSG00005018849	FARP1 (ENSOTSG00005018865) #11	RAP2A (ENSOTSG00005019336)	MBNL2 (ENSOTSG00005019337) #14	OXGR1 (ENSOTSG00005019338) #15	HS6ST3 (ENSOTSG00005019339) #16	UGGT2 (ENSOTSG00005019373) #17	dnajc3a (ENSOTSG00005026434)	CLDN10 (ENSOTSG00005026435) #20	ENSOTSG00005026436	cldn10b (ENSOTSG00005026438) #20	ABCC4 (ENSOTSG00005026446) #21	sox21b (ENSOTSG00005026763) #22	dct (ENSOTSG00005026771) #25	gpc6b (ENSOTSG00005026775) ##26	TMPRSS3 (ENSOTSG00005026778)	pdxka (ENSOTSG00005026779)	agpat3 (ENSOTSG00005026782)	ENSOTSG00005026783	ENSOTSG00005026784	ENSOTSG00005026785	ENSOTSG00005026786	ENSOTSG00005026787	ENSOTSG00005026789	ndufa10 (ENSOTSG00005026790)	ENSOTSG00005001354	ENSOTSG00005009276	sh3bp4 (ENSOTSG00005010245)
Rainbow trout	MODERN SPECIES	21	STK24 (ENSOMYG00000022511) #10	ENSOMYG00000031992 #8	DOCK9 (ENSOMYG00000033583) #7	FARP1 (ENSOMYG00000040192) #11	RAP2A (ENSOMYG00000041668)	MBNL2 (ENSOMYG00000041695) #14	ENSOMYG00000069937	OXGR1 (ENSOMYG00000050579) #15	HS6ST3 (ENSOMYG00000041768) #16	UGGT2 (ENSOMYG00000041825) #17	dnajc3a (ENSOMYG00000042251)	CLDN10 (ENSOMYG00000042315) #20	ENSOMYG00000042320	cldn10b (ENSOMYG00000042324) #20	ABCC4 (ENSOMYG00000042353) #21	sox21b (ENSOMYG00000042388) #22	ENSOMYG00000042409 #25	gpc6b (ENSOMYG00000042511) ##26	ENSOMYG00000042544	ENSOMYG00000054604	pdxka (ENSOMYG00000042566)	ENSOMYG00000042728	ENSOMYG00000053300	il1rl1 (ENSOMYG00000042755)	ENSOMYG00000042829	ENSOMYG00000068390	ENSOMYG00000042842	ENSOMYG00000060709	ENSOMYG00000000270	ndufa10 (ENSOMYG00000000339)	ENSOMYG00000000840
Salmo	ANCESTRAL SPECIES	15	ENSGT00940000157974.d	ENSGT00940000153476.b.o.a.a #10	ENSGT00940000155995.e.b #8	ENSGT00940000155972.B.bb #7	ENSGT00940000155318.b.a.b.c #11	ENSGT00940000160594.g.a.a	ENSGT00950000182897.B.a.b.b.a.a #14	ENSGT01030000234621.F.d #15	ENSGT00950000183071.a.a.a.e.a.b #16	ENSGT00390000004600.b.b #17	ENSGT00940000165805	ENSGT00940000155232.t.a.b.a.l #20	ENSGT00940000166809	ENSGT00940000155232.t.b.b.d.b #20	ENSGT00940000153931.b.a #21	ENSGT00940000162795.e #22	ENSGT00940000156856.d #25	ENSGT01050000244897.a.b.b.a.a.f ##26	ENSGT00940000158589.b.a	ENSGT00940000158449.f	ENSGT00390000003874.a.a.b	ENSGT00950000182836.b.b.b.a.k.a	ENSGT01090000259985.b.a.a.a.i	ENSGT00940000162556.A.b	ENSGT00940000154486.b.b.a.b.b	ENSGT00940000154486.b.a.a.b.e.a.a.a.d	ENSGT00390000016151.g	ENSGT00940000160532.h.c.a	ENSGT00940000160532.h.c.b	ENSGT00390000013151.a.a.b.c	ENSGT00940000160639.b.a.b.b.b.a
Atlantic salmon	MODERN SPECIES	17	ino80d (ENSSSAG00000076036)	STK24 (ENSSSAG00000076047) #10	ENSSSAG00000115615 #8	DOCK9 (ENSSSAG00000076706) #7	ENSSSAG00000083959 #11	ENSSSAG00000113001	MBNL2 (ENSSSAG00000081035) #14	OXGR1 (ENSSSAG00000081068) #15	HS6ST3 (ENSSSAG00000122059) #16	UGGT2 (ENSSSAG00000081076) #17	dnajc3a (ENSSSAG00000081124)	CLDN10 (ENSSSAG00000081129) #20	ENSSSAG00000097966	cldn10b (ENSSSAG00000081133) #20	ABCC4 (ENSSSAG00000081257) #21	sox21b (ENSSSAG00000090605) #22	ENSSSAG00000081457 #25	gpc6b (ENSSSAG00000068375) ##26	ENSSSAG00000081471	ENSSSAG00000081472	pdxka (ENSSSAG00000086835)	ENSSSAG00000081475	ENSSSAG00000095490	ENSSSAG00000081478	ENSSSAG00000081480	ENSSSAG00000081479	ENSSSAG00000081481	ENSSSAG00000081482	ENSSSAG00000081485	ndufa10 (ENSSSAG00000081486)	ENSSSAG00000081497
River trout	MODERN SPECIES	16	INO80D (ENSSTUG00000047067)	STK24 (ENSSTUG00000047087) #10	SLC15A1 (ENSSTUG00000047400) #8	DOCK9 (ENSSTUG00000049451) #7	ENSSTUG00000049957 #11	RAP2A (ENSSTUG00000050070)	MBNL2 (ENSSTUG00000050073) #14	OXGR1 (ENSSTUG00000050110) #15	HS6ST3 (ENSSTUG00000050111) #16	UGGT2 (ENSSTUG00000050158) #17	dnajc3a (ENSSTUG00000050699)	CLDN10 (ENSSTUG00000050746) #20	ENSSTUG00000050748	cldn10b (ENSSTUG00000050750) #20	ABCC4 (ENSSTUG00000050790) #21	sox21b (ENSSTUG00000050812) #22	dct (ENSSTUG00000050816) #25	gpc6b (ENSSTUG00000050825) ##26	ENSSTUG00000050829	TMPRSS3 (ENSSTUG00000050830)	ENSSTUG00000050834	pdxka (ENSSTUG00000050837)	agpat3 (ENSSTUG00000050854)	ENSSTUG00000050856	ENSSTUG00000050857	ENSSTUG00000050858	ENSSTUG00000050861	ENSSTUG00000050863	ENSSTUG00000050869	ENSSTUG00000050919	ndufa10 (ENSSTUG00000050924)
Huchen	MODERN SPECIES	7	INO80D (ENSHHUG00000034725)	STK24 (ENSHHUG00000034752) #10	SLC15A1 (ENSHHUG00000035209) #8	DOCK9 (ENSHHUG00000035445) #7	FARP1 (ENSHHUG00000036487) #11	RAP2A (ENSHHUG00000036565)	MBNL2 (ENSHHUG00000036576) #14	OXGR1 (ENSHHUG00000036614) #15	HS6ST3 (ENSHHUG00000036615) #16	UGGT2 (ENSHHUG00000036620) #17	dnajc3a (ENSHHUG00000036759)	ENSHHUG00000036780	ENSHHUG00000036783	CLDN10 (ENSHHUG00000036788) #20	ABCC4 (ENSHHUG00000036809) #21	sox21b (ENSHHUG00000037012) #22	dct (ENSHHUG00000037016) #25	gpc6b (ENSHHUG00000037034) ##26	ENSHHUG00000037074	ENSHHUG00000015925	ENSHHUG00000015926	pdxka (ENSHHUG00000015929)	agpat3 (ENSHHUG00000016045)	ENSHHUG00000016068
Salmoninae	ANCESTRAL SPECIES	1211														ENSGT00940000155232.t.a.b.a.k #20	ENSGT00940000155232.t.b.b.d.a #20	ENSGT00940000162795.f #22	ENSGT00940000156856.c.a #25
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000160994.f	ENSGT00940000158781.d	ENSGT00940000160642.j	ENSGT00940000153514.b.n	ENSGT00940000157974.c	ENSGT00940000153476.b.o.a.b #10	ENSGT00940000155972.B.cb #7	ENSGT00940000155318.b.a.b.d #11	ENSGT01050000244823.d.a.b.a.a.b.a.b.a.b.b.a.b	ENSGT00940000160594.h	ENSGT00950000182897.B.a.b.b.a.b #14	ENSGT00990000211313	ENSGT00950000183071.a.a.a.e.a.a #16	ENSGT00940000155232.t.a.b.a.k #20	ENSGT00940000155232.t.b.b.d.a #20	ENSGT00940000162795.f #22	ENSGT00940000156856.c.b #25	ENSGT01050000244897.a.b.b.a.a.e ##26	ENSGT00390000003874.a.a.a	ENSGT00950000182836.b.b.b.a.k.b	ENSGT01100000263531.G.n	ENSGT00940000154486.b.b.a.b.a	ENSGT00940000154486.b.a.a.b.e.a.a.a.c	ENSGT00390000016151.h	ENSGT00510000049102.c	ENSGT00940000160532.h.d.a	ENSGT00950000182977.B.b.b.d	ENSGT00940000160532.h.d.b	ENSGT00530000065251.m.a	ENSGT00390000013151.a.a.b.d	ENSGT00940000160639.b.a.b.b.b.b
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00940000158781.d	ENSGT00940000160642.j	ENSGT00990000212112	ENSGT00940000157974.c	ENSGT00940000153476.b.o.a.b #10	ENSGT00940000155972.B.cb #7	ENSGT00940000155318.b.a.b.d #11	ENSGT01050000244823.d.a.b.a.a.b.a.b.a.b.b.a.b	ENSGT01050000244823.d.a.b.a.a.b.a.b.a.a.b.b.a	ENSGT00940000160594.g.a.b	ENSGT00950000182897.B.a.b.b.a.b #14	ENSGT00990000211313	ENSGT00950000183071.a.a.a.e.a.a #16	ENSGT00940000155232.t.a.b.a.k #20	ENSGT00940000155232.t.b.b.d.a #20	ENSGT00940000162795.f #22	ENSGT00940000156856.c.b #25	ENSGT01050000244897.a.b.b.a.a.e ##26	ENSGT00390000003874.a.a.a	ENSGT00950000182836.b.b.b.a.k.b	ENSGT01100000263531.G.n	ENSGT00940000154486.b.b.a.b.a	ENSGT00940000154486.b.a.a.b.e.a.a.a.c	ENSGT00940000153510.a.a.b	ENSGT00390000016151.h	ENSGT00510000049102.c	ENSGT00940000160532.h.d.a	ENSGT00950000182977.B.b.b.d	ENSGT00940000160532.h.d.b	ENSGT00530000065251.m.a	ENSGT00390000013151.a.a.b.d
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT00940000158781.d	ENSGT00940000160642.j	ENSGT00990000212112	ENSGT00940000157974.c	ENSGT00940000153476.b.o.a.b #10	ENSGT00940000155972.B.cb #7	ENSGT00940000155318.b.a.b.d #11	ENSGT01050000244823.d.a.b.a.a.b.a.b.a.b.b.a.b	ENSGT01050000244823.d.a.b.a.a.b.a.b.a.a.b.b.a	ENSGT00940000160594.g.a.b	ENSGT00950000182897.B.a.b.b.a.b #14	ENSGT00990000211313	ENSGT00950000183071.a.a.a.e.a.a #16	ENSGT00940000155232.t.a.b.a.k #20	ENSGT00940000155232.t.b.b.d.a #20	ENSGT00940000162795.f #22	ENSGT00940000156856.c.b #25	ENSGT01050000244897.a.b.b.a.a.e ##26	ENSGT00390000003874.a.a.a	ENSGT00950000182836.b.b.b.a.k.b	ENSGT01100000263531.G.n	ENSGT01040000241782.a	ENSGT00940000154486.b.b.a.b.a	ENSGT00940000154486.b.a.a.b.e.a.a.a.c	ENSGT00940000153510.a.a.b	ENSGT00390000016151.h	ENSGT00510000049102.c	ENSGT00940000160532.h.d.a	ENSGT00950000182977.B.b.b.d	ENSGT00940000160532.h.d.b	ENSGT00530000065251.m.a
Chinook salmon	MODERN SPECIES	66	ENSOTSG00005036358	stxbp1a (ENSOTSG00005031912)	niban2a (ENSOTSG00005031795)	slc31a2 (ENSOTSG00005031790)	ENSOTSG00005031755	pou5f3 (ENSOTSG00005031753)	fut7 (ENSOTSG00005031752)	clic3 (ENSOTSG00005031739)	ENSOTSG00005031736	pdhb (ENSOTSG00005031734)	kctd6a (ENSOTSG00005031730)	ccdc71 (ENSOTSG00005031727)	stab1 (ENSOTSG00005031725)	ENSOTSG00005031721 #20	cldn10b (ENSOTSG00005031716) #20	sox21b (ENSOTSG00005031714) #22	dct (ENSOTSG00005031712) #25	gpc6b (ENSOTSG00005031710) ##26	gpc6b (ENSOTSG00005031709) ##26	PDXK (ENSOTSG00005031708)	agpat3 (ENSOTSG00005031707)	ENSOTSG00005031704	ENSOTSG00005031703	ENSOTSG00005031565	ENSOTSG00005031555	ndufa10 (ENSOTSG00005031366)	gypc (ENSOTSG00005031364)
Coho salmon	MODERN SPECIES	18	ENSOKIG00005010181	ENSOKIG00005010152	ENSOKIG00005010147	ENSOKIG00005010142	ENSOKIG00005010130	ENSOKIG00005010126	ENSOKIG00005010112	ENSOKIG00005010108	ENSOKIG00005010095	RAP2A (ENSOKIG00005010089)	MBNL2 (ENSOKIG00005010014) #14	ENSOKIG00005009981	HS6ST3 (ENSOKIG00005009972) #16	ENSOKIG00005009947 #20	CLDN10 (ENSOKIG00005009930) #20	sox21b (ENSOKIG00005009917) #22	DCT (ENSOKIG00005009906) #25	dct (ENSOKIG00005009740) #25	gpc6b (ENSOKIG00005009702) ##26	PDXK (ENSOKIG00005009663)	ENSOKIG00005009653	AGPAT3 (ENSOKIG00005009634)	ENSOKIG00005009595	ENSOKIG00005009583	ENSOKIG00005009542	ENSOKIG00005009470	ENSOKIG00005009445	NDUFA10 (ENSOKIG00005009422)	ENSOKIG00005009405	gypc (ENSOKIG00005009358)	CNTNAP5 (ENSOKIG00005009128)
Rainbow trout	MODERN SPECIES	14	ENSOMYG00000019294	ENSOMYG00000019310	ENSOMYG00000054676	ENSOMYG00000050773	ENSOMYG00000050388	ENSOMYG00000062273	ENSOMYG00000061875	ENSOMYG00000069828	ENSOMYG00000023969	RAP2A (ENSOMYG00000019238)	MBNL2 (ENSOMYG00000019148) #14	ENSOMYG00000019064	HS6ST3 (ENSOMYG00000019059) #16	ENSOMYG00000019043 #20	ENSOMYG00000019029 #20	sox21b (ENSOMYG00000019015) #22	ENSOMYG00000018120 #25	gpc6b (ENSOMYG00000018074) ##26	ENSOMYG00000017742	ENSOMYG00000017677	ENSOMYG00000017645	ENSOMYG00000017622	ENSOMYG00000017579	ENSOMYG00000049274	ENSOMYG00000017512	ENSOMYG00000069429	ENSOMYG00000027150	ENSOMYG00000051381	ENSOMYG00000069785	ENSOMYG00000026237	ENSOMYG00000026010
Salmo	ANCESTRAL SPECIES	10	ENSGT00940000160642.j	ENSGT00940000153514.b.n	ENSGT00940000157974.c	ENSGT00940000153476.b.o.a.b #10	ENSGT00940000155972.B.cb #7	ENSGT00940000155318.b.a.b.d #11	ENSGT01050000244823.d.a.b.a.a.b.a.b.a.b.b.a.b	ENSGT01050000244823.d.a.b.a.a.b.b.b	ENSGT01050000244823.d.a.b.a.a.a.b	ENSGT00940000160594.h	ENSGT00950000182897.B.a.b.b.a.b #14	ENSGT00990000211313	ENSGT00950000183071.a.a.a.e.a.a #16	ENSGT00940000155232.t.a.b.a.k #20	ENSGT00940000155232.t.b.b.d.a #20	ENSGT00940000162795.f #22	ENSGT00940000156856.c.b #25	ENSGT01050000244897.a.b.b.a.a.e ##26	ENSGT00390000003874.a.a.a	ENSGT00950000182836.b.b.b.a.k.b	ENSGT01100000263531.G.n	ENSGT00990000212594	ENSGT00940000154486.b.b.a.a	ENSGT00390000016151.h	ENSGT00940000160532.h.d.a	ENSGT00950000182977.B.b.b.d	ENSGT00940000160532.h.d.b	ENSGT00530000065251.m.a	ENSGT00390000013151.a.a.b.d	ENSGT00940000160639.b.a.b.b.b.b	ENSGT00940000166921.a
River trout	MODERN SPECIES	12	ENSSTUG00000044475 #11	ENSSTUG00000045416	ENSSTUG00000045421	ENSSTUG00000045426	ENSSTUG00000045431	ENSSTUG00000045436	ENSSTUG00000045448	ENSSTUG00000001982	RAP2A (ENSSTUG00000002344)	MBNL2 (ENSSTUG00000002540) #14	ENSSTUG00000002640	HS6ST3 (ENSSTUG00000002658) #16	ENSSTUG00000003159 #20	ENSSTUG00000003334	cldn10b (ENSSTUG00000003552) #20	sox21b (ENSSTUG00000003562) #22	dct (ENSSTUG00000003619) #25	gpc6b (ENSSTUG00000003753) ##26	PDXK (ENSSTUG00000003967)	agpat3 (ENSSTUG00000004078)	ENSSTUG00000004131	ENSSTUG00000004201	ENSSTUG00000004780	ndufa10 (ENSSTUG00000004793)	ENSSTUG00000004869	ENSSTUG00000005306	ENSSTUG00000005317	ENSSTUG00000005465	ENSSTUG00000007613	ENSSTUG00000007626	sh3bp4 (ENSSTUG00000007637)
Atlantic salmon	MODERN SPECIES	13	ENSSSAG00000066871	ENSSSAG00000050282 #7	FARP1 (ENSSSAG00000086641) #11	ENSSSAG00000089995	ENSSSAG00000103291	ENSSSAG00000110345	ENSSSAG00000113440	ENSSSAG00000115040	ENSSSAG00000068508	RAP2A (ENSSSAG00000113659)	MBNL2 (ENSSSAG00000068491) #14	ENSSSAG00000068489	HS6ST3 (ENSSSAG00000081069) #16	CLD10 (ENSSSAG00000068476) #20	CLD10 (ENSSSAG00000068473) #20	sox21b (ENSSSAG00000119187) #22	ENSSSAG00000068460 #25	gpc6b (ENSSSAG00000081467) ##26	ENSSSAG00000096540	PDXK (ENSSSAG00000068272)	ENSSSAG00000099256	ENSSSAG00000068245	ENSSSAG00000068236	ENSSSAG00000067965	ahr2a (ENSSSAG00000122051)	NDUAA (ENSSSAG00000067928)	ENSSSAG00000109411	ENSSSAG00000113592	ENSSSAG00000064864	clm8 (ENSSSAG00000064734)	ENSSSAG00000063572
Huchen	MODERN SPECIES	3802																sox21b (ENSHHUG00000043164) #22
Northern pike	MODERN SPECIES	15	INO80D (ENSELUG00000023689)	STK24 (ENSELUG00000023700) #10	SLC15A1 (ENSELUG00000024361) #8	DOCK9 (ENSELUG00000024595) #7	FARP1 (ENSELUG00000003196) #11	RAP2A (ENSELUG00000003224)	MBNL2 (ENSELUG00000003280) #14	ENSELUG00000003299 #15	HS6ST3 (ENSELUG00000003304) #16	UGGT2 (ENSELUG00000003443) #17	dnajc3a (ENSELUG00000003522)	CLDN10 (ENSELUG00000003547) #20	ENSELUG00000003558	cldn10b (ENSELUG00000003571) #20	ABCC4 (ENSELUG00000003606) #21	sox21b (ENSELUG00000003620) #22	dct (ENSELUG00000003628) #25	gpc6b (ENSELUG00000003679) ##26	TMPRSS3 (ENSELUG00000003710)	ENSELUG00000028423	pdxka (ENSELUG00000003730)	agpat3 (ENSELUG00000003749)	ENSELUG00000003796	ndufa10 (ENSELUG00000003853)	CNTNAP5 (ENSELUG00000003908)	ENSELUG00000004224	ENSELUG00000004356	sh3bp4 (ENSELUG00000004382)	ARL4C (ENSELUG00000004400)	ADPRH (ENSELUG00000004422)	arhgap15 (ENSELUG00000004474)
Spotted gar	MODERN SPECIES	655	sugt1 (ENSLOCG00000005330)	CNMD (ENSLOCG00000005306)	PCDH8 (ENSLOCG00000005286)	pcdh8 (ENSLOCG00000005273)	pcdh17 (ENSLOCG00000005237)	oxgr1a.2 (ENSLOCG00000017784) #15	hs6st3b (ENSLOCG00000005220) #16	UGGT2 (ENSLOCG00000005154) #17	dnajc3a (ENSLOCG00000005118)	DZIP1 (ENSLOCG00000005084) #19	CLDN10 (ENSLOCG00000005060) #20	ENSLOCG00000005024	ENSLOCG00000005008	cldn10a (ENSLOCG00000004984) #20	abcc4 (ENSLOCG00000004910) #21	sox21b (ENSLOCG00000017783) #22	GPR180 (ENSLOCG00000004885) #23	dct (ENSLOCG00000004857) #25	gpc6b (ENSLOCG00000004830) #26	gpc5a (ENSLOCG00000004783)	ENSLOCG00000004771	SLITRK5 (ENSLOCG00000017782)	diaph3 (ENSLOCG00000004676)	tdrd3 (ENSLOCG00000004652)	PCDH20 (ENSLOCG00000017781)	ENSLOCG00000017780	PCDH9 (ENSLOCG00000004624)	pou4f1 (ENSLOCG00000004613)	OBI1 (ENSLOCG00000004597)	RBM26 (ENSLOCG00000004557)	ndfip2 (ENSLOCG00000004539)
Reedfish	MODERN SPECIES	12	kpnb3 (ENSECRG00000014105) #13	ENSECRG00000014149	rap2ab (ENSECRG00000014197)	mbnl2 (ENSECRG00000014224) #14	ENSECRG00000014267	ENSECRG00000014283 #15	oxgr1a.2 (ENSECRG00000014314) #15	HS6ST3 (ENSECRG00000014331) #16	ENSECRG00000014370	hs6st3b (ENSECRG00000014387) #16	UGGT2 (ENSECRG00000014425) #17	dnajc3a (ENSECRG00000014526)	ENSECRG00000014611 #19	ENSECRG00000014682 #19	cldn10a (ENSECRG00000014741) #20	sox21b (ENSECRG00000014838) #22	GPR180 (ENSECRG00000014858) #23	TGDS (ENSECRG00000014916) #24	dct (ENSECRG00000014977) #25	ENSECRG00000015012 #26	GPC6 (ENSECRG00000015037) #26	ENSECRG00000015072	gpc5a (ENSECRG00000015102)	ENSECRG00000015118	ENSECRG00000015137	ENSECRG00000015224	SLITRK5 (ENSECRG00000015244)	SLITRK5 (ENSECRG00000015262)	ENSECRG00000015304	slitrk6 (ENSECRG00000015378)	ENSECRG00000015397
Elephant shark	MODERN SPECIES	1501							pdk4 (ENSCMIG00000011253)	asb4 (ENSCMIG00000011223)	pon1 (ENSCMIG00000011221)	PPP1R9A (ENSCMIG00000011186)	ENSCMIG00000011181	gpc6b (ENSCMIG00000011155) #26	dct (ENSCMIG00000011066) #25	TGDS (ENSCMIG00000011012) #24	GPR180 (ENSCMIG00000010997) #23	sox21b (ENSCMIG00000010993) #22	abcc4 (ENSCMIG00000010654) #21	CLDN10 (ENSCMIG00000010516) #20	ENSCMIG00000010507 #19	DNAJC3 (ENSCMIG00000010429) #18	UGGT2 (ENSCMIG00000010202) #17	ENSCMIG00000010147 #16	HS6ST3 (ENSCMIG00000010145) #16	oxgr1a.2 (ENSCMIG00000010144) #15	SLAIN1 (ENSCMIG00000010143)	ENSCMIG00000010142	ENSCMIG00000010127	mycbp2 (ENSCMIG00000009953)	CLN5 (ENSCMIG00000009855)	kctd12.1 (ENSCMIG00000009851)	LMO7 (ENSCMIG00000009802)
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000162795 #22
Fruitfly	MODERN SPECIES	18	CG3919 (FBgn0036423)	stwl (FBgn0003459)	CG3868 (FBgn0036422)	CG43120 (FBgn0262580)	CG13481 (FBgn0036421)	CG13482 (FBgn0036419)	fz (FBgn0001085)	CG7906 (FBgn0036417)	CG34244 (FBgn0085273)	CG7924 (FBgn0036416)	CG7768 (FBgn0036415)	saturn (FBgn0052141)	nuf (FBgn0013718)	nan (FBgn0036414)	D (FBgn0000411)	Sox21b (FBgn0042630) #22	Sox21a (FBgn0036411)	Fbp1 (FBgn0000639)	CG8100 (FBgn0036410)	btl (FBgn0285896)	Pex1 (FBgn0013563)	Frl (FBgn0267795)	CG13484 (FBgn0036406)	CG6833 (FBgn0036405)	Neurl4 (FBgn0283503)	Hsc70Cb (FBgn0026418)	CG6661 (FBgn0036403)	CG6650 (FBgn0036402)	endos (FBgn0061515)	Ptip (FBgn0052133)	upSET (FBgn0036398)