Mammalia	ANCESTRAL SPECIES	116					ENSGT00390000008610.a.a	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28
Theria	ANCESTRAL SPECIES	15	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Primates	ANCESTRAL SPECIES		ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000018423.a	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000018423.a	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000148066 #29	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000018423.a	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000148066 #29	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048.b
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000018423.a	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000148066 #29	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000166824	ENSGT00390000018145.cb.a.a.b.a #34	ENSGT00940000163239 #35	ENSGT00940000161241 #36
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000018423.a	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00940000163364.r #20	ENSGT00390000012955.u #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000148066 #29	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000166824	ENSGT00390000018145.cb.a.a.b.a #34	ENSGT00940000163239 #35	ENSGT00940000161241 #36
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000018423.a	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00940000163364.r #20	ENSGT00390000012955.u #21	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000148066 #29	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00390000018145.cb.a.a.b.a #34	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37
Drill	MODERN SPECIES	1197							P2RY2 (ENSMLEG00000012238) #13	P2RY6 (ENSMLEG00000024158) #14	ARHGEF17 (ENSMLEG00000034978) #15	RELT (ENSMLEG00000035242) #16	FAM168A (ENSMLEG00000039093) #17	PLEKHB1 (ENSMLEG00000038380) #18	RAB6A (ENSMLEG00000038771) #19	ENSMLEG00000005806 #20	MRPL48 (ENSMLEG00000025711) #21	PAAF1 (ENSMLEG00000034763) #22	DNAJB13 (ENSMLEG00000032553) #23	UCP2 (ENSMLEG00000012134) #24	UCP3 (ENSMLEG00000044066) #25	C2CD3 (ENSMLEG00000042612) #26	PPME1 (ENSMLEG00000038271) #27	P4HA3 (ENSMLEG00000036980) #28	ENSMLEG00000022481 #29	ENSMLEG00000003269 #30	PGM2L1 (ENSMLEG00000044334) #31	KCNE3 (ENSMLEG00000005724) #32	ENSMLEG00000031931 #33	ENSMLEG00000038036 #34	ENSMLEG00000036126 #35	CHRDL2 (ENSMLEG00000043902) #36	RNF169 (ENSMLEG00000040088) #37
Sooty mangabey	MODERN SPECIES	545	ARAP1 (ENSCATG00000030588)	STARD10 (ENSCATG00000039309)	ATG16L2 (ENSCATG00000042490)	ENSCATG00000014513	FCHSD2 (ENSCATG00000045137)	P2RY2 (ENSCATG00000013549) #13	P2RY6 (ENSCATG00000010832) #14	ARHGEF17 (ENSCATG00000031638) #15	RELT (ENSCATG00000039204) #16	FAM168A (ENSCATG00000039849) #17	ENSCATG00000030929	PLEKHB1 (ENSCATG00000040580) #18	RAB6A (ENSCATG00000012428) #19	MRPL48 (ENSCATG00000008832) #21	ENSCATG00000033670	PAAF1 (ENSCATG00000040783) #22	DNAJB13 (ENSCATG00000031572) #23	UCP2 (ENSCATG00000039292) #24	UCP3 (ENSCATG00000037582) #25	C2CD3 (ENSCATG00000044098) #26	PPME1 (ENSCATG00000033372) #27	P4HA3 (ENSCATG00000035672) #28	ENSCATG00000011991 #29	PGM2L1 (ENSCATG00000029770) #31	LIPT2 (ENSCATG00000029187)	ENSCATG00000000611 #34	ENSCATG00000043513 #35	CHRDL2 (ENSCATG00000018972) #36	RNF169 (ENSCATG00000043238) #37	XRRA1 (ENSCATG00000039406)	ENSCATG00000039999
Olive baboon	MODERN SPECIES	3	STARD10 (ENSPANG00000010680)	ATG16L2 (ENSPANG00000008372)	ENSPANG00000040580	ENSPANG00000039173	FCHSD2 (ENSPANG00000001966)	P2RY2 (ENSPANG00000008844) #13	P2RY6 (ENSPANG00000017366) #14	ARHGEF17 (ENSPANG00000000122) #15	RELT (ENSPANG00000000123) #16	FAM168A (ENSPANG00000006479) #17	PLEKHB1 (ENSPANG00000024370) #18	RAB6A (ENSPANG00000014356) #19	ENSPANG00000031390 #20	MRPL48 (ENSPANG00000019128) #21	COA4 (ENSPANG00000050578)	PAAF1 (ENSPANG00000006333) #22	DNAJB13 (ENSPANG00000002243) #23	UCP2 (ENSPANG00000011637) #24	UCP3 (ENSPANG00000004041) #25	C2CD3 (ENSPANG00000017376) #26	PPME1 (ENSPANG00000006478) #27	P4HA3 (ENSPANG00000009047) #28	PGM2L1 (ENSPANG00000008343) #31	ENSPANG00000042743 #32	ENSPANG00000045101	ENSPANG00000037152	ENSPANG00000042947	ENSPANG00000038227	XRRA1 (ENSPANG00000017794)	RNF169 (ENSPANG00000005996) #37	CHRDL2 (ENSPANG00000011367) #36
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000148066 #29	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000166824	ENSGT00390000018145.cb.a.a.b.a #34	ENSGT00940000163239 #35	ENSGT00940000161241 #36
Pig-tailed macaque	MODERN SPECIES	423	PHOX2A (ENSMNEG00000036777)	CLPB (ENSMNEG00000032568)	PDE2A (ENSMNEG00000016355)	ARAP1 (ENSMNEG00000040367)	STARD10 (ENSMNEG00000036590)	ATG16L2 (ENSMNEG00000036070)	FCHSD2 (ENSMNEG00000034851)	P2RY2 (ENSMNEG00000020248) #13	P2RY6 (ENSMNEG00000022365) #14	ARHGEF17 (ENSMNEG00000037963) #15	RELT (ENSMNEG00000040208) #16	FAM168A (ENSMNEG00000022700) #17	PLEKHB1 (ENSMNEG00000040021) #18	RAB6A (ENSMNEG00000029216) #19	MRPL48 (ENSMNEG00000043715) #21	PAAF1 (ENSMNEG00000031366) #22	ENSMNEG00000027405	DNAJB13 (ENSMNEG00000033658) #23	UCP2 (ENSMNEG00000037621) #24	UCP3 (ENSMNEG00000038430) #25	C2CD3 (ENSMNEG00000043159) #26	PPME1 (ENSMNEG00000031477) #27	P4HA3 (ENSMNEG00000034504) #28	ENSMNEG00000003571 #29	ENSMNEG00000025468 #30	PGM2L1 (ENSMNEG00000030625) #31	KCNE3 (ENSMNEG00000026796) #32	LIPT2 (ENSMNEG00000029656)	ENSMNEG00000035237 ##33	ENSMNEG00000036818 #34	ENSMNEG00000043787 #35
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000166824	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048.b	ENSGT00440000038181.eb.a.a.b
Crab-eating macaque	MODERN SPECIES	5	STARD10 (ENSMFAG00000018716)	ENSMFAG00000050335	ENSMFAG00000041534	FCHSD2 (ENSMFAG00000004075)	ENSMFAG00000052451	ENSMFAG00000026637	ENSMFAG00000059191	P2RY6 (ENSMFAG00000028522) #14	ENSMFAG00000036527 #15	ENSMFAG00000053348 #15	RELT (ENSMFAG00000032863) #16	FAM168A (ENSMFAG00000037330) #17	PLEKHB1 (ENSMFAG00000041061) #18	RAB6A (ENSMFAG00000041027) #19	MRPL48 (ENSMFAG00000003172) #21	PAAF1 (ENSMFAG00000032917) #22	DNAJB13 (ENSMFAG00000035964) #23	UCP2 (ENSMFAG00000003662) #24	UCP3 (ENSMFAG00000001176) #25	C2CD3 (ENSMFAG00000027579) #26	PPME1 (ENSMFAG00000031619) #27	PGM2L1 (ENSMFAG00000031326) #31	KCNE3 (ENSMFAG00000028410) #32	LIPT2 (ENSMFAG00000038446)	ENSMFAG00000049105	ENSMFAG00000003267	ENSMFAG00000001432 #35	CHRDL2 (ENSMFAG00000042027) #36	RNF169 (ENSMFAG00000031265) #37	XRRA1 (ENSMFAG00000002984)	ENSMFAG00000040665
Rhesus	MODERN SPECIES	5	ENSMMUG00000061215	CLPB (ENSMMUG00000005423)	ARAP1 (ENSMMUG00000015054)	STARD10 (ENSMMUG00000039301)	ATG16L2 (ENSMMUG00000001293)	FCHSD2 (ENSMMUG00000001294)	P2RY2 (ENSMMUG00000019186) #13	P2RY6 (ENSMMUG00000003138) #14	ARHGEF17 (ENSMMUG00000003139) #15	RELT (ENSMMUG00000003140) #16	FAM168A (ENSMMUG00000003142) #17	PLEKHB1 (ENSMMUG00000004791) #18	RAB6A (ENSMMUG00000030964) #19	MRPL48 (ENSMMUG00000060300) #21	COA4 (ENSMMUG00000007381)	PAAF1 (ENSMMUG00000007382) #22	ENSMMUG00000047889	DNAJB13 (ENSMMUG00000041012) #23	UCP2 (ENSMMUG00000002605) #24	UCP3 (ENSMMUG00000051795) #25	C2CD3 (ENSMMUG00000010321) #26	PPME1 (ENSMMUG00000017398) #27	P4HA3 (ENSMMUG00000017399) #28	PGM2L1 (ENSMMUG00000017402) #31	ENSMMUG00000056316	KCNE3 (ENSMMUG00000052952) #32	LIPT2 (ENSMMUG00000013094)	ENSMMUG00000013093	POLD3 (ENSMMUG00000020643) #35	CHRDL2 (ENSMMUG00000020644) #36	RNF169 (ENSMMUG00000052870) #37
Vervet Monkey	MODERN SPECIES		ENSCSAG00000000626	PDE2A (ENSCSAG00000004136)	ARAP1 (ENSCSAG00000004127)	STARD10 (ENSCSAG00000004111)	ATG16L2 (ENSCSAG00000004094)	FCHSD2 (ENSCSAG00000004080)	P2RY2 (ENSCSAG00000000625) #13	P2RY6 (ENSCSAG00000000624) #14	ARHGEF17 (ENSCSAG00000004075) #15	RELT (ENSCSAG00000004070) #16	FAM168A (ENSCSAG00000004066) #17	PLEKHB1 (ENSCSAG00000004063) #18	RAB6A (ENSCSAG00000004062) #19	MRPL48 (ENSCSAG00000004059) #21	COA4 (ENSCSAG00000004057)	PAAF1 (ENSCSAG00000004055) #22	ENSCSAG00000000623	DNAJB13 (ENSCSAG00000004053) #23	UCP2 (ENSCSAG00000004051) #24	UCP3 (ENSCSAG00000004048) #25	C2CD3 (ENSCSAG00000004043) #26	PPME1 (ENSCSAG00000004025) #27	P4HA3 (ENSCSAG00000004019) #28	PGM2L1 (ENSCSAG00000004011) #31	KCNE3 (ENSCSAG00000000622) #32	LIPT2 (ENSCSAG00000004004)	ENSCSAG00000004000 #35	CHRDL2 (ENSCSAG00000003992) #36	RNF169 (ENSCSAG00000003988) #37	XRRA1 (ENSCSAG00000003983)	ENSCSAG00000003967
Rhinopithecus	ANCESTRAL SPECIES	21	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000018423.a	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000148066 #29	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000166824	ENSGT00390000018145.cb.a.a.b.a #34	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37
Golden snub-nosed monkey	MODERN SPECIES	1304	CLPB (ENSRROG00000041613)	PDE2A (ENSRROG00000042016)	ARAP1 (ENSRROG00000029375)	STARD10 (ENSRROG00000024050)	ATG16L2 (ENSRROG00000024129)	FCHSD2 (ENSRROG00000041973)	P2RY2 (ENSRROG00000025105) #13	P2RY6 (ENSRROG00000002754) #14	ARHGEF17 (ENSRROG00000041198) #15	RELT (ENSRROG00000042366) #16	ENSRROG00000034790	FAM168A (ENSRROG00000011809) #17	PLEKHB1 (ENSRROG00000029271) #18	RAB6A (ENSRROG00000042103) #19	MRPL48 (ENSRROG00000043160) #21	PAAF1 (ENSRROG00000044104) #22	DNAJB13 (ENSRROG00000026626) #23	UCP2 (ENSRROG00000026780) #24	UCP3 (ENSRROG00000035931) #25	C2CD3 (ENSRROG00000036372) #26	PPME1 (ENSRROG00000031513) #27	P4HA3 (ENSRROG00000030733) #28	ENSRROG00000025736 #29	PGM2L1 (ENSRROG00000035061) #31	KCNE3 (ENSRROG00000008117) #32	LIPT2 (ENSRROG00000044982)	ENSRROG00000018216	ENSRROG00000040083	ENSRROG00000031930 #34	ENSRROG00000041045 #35	CHRDL2 (ENSRROG00000029406) #36
Black snub-nosed monkey	MODERN SPECIES	775														MUC17 (ENSRBIG00000029632)	ENSRBIG00000025698	PAAF1 (ENSRBIG00000041686) #22	DNAJB13 (ENSRBIG00000032641) #23	UCP2 (ENSRBIG00000028444) #24	UCP3 (ENSRBIG00000032946) #25	C2CD3 (ENSRBIG00000036054) #26	PPME1 (ENSRBIG00000032741) #27	P4HA3 (ENSRBIG00000034204) #28	ENSRBIG00000002437 #29	PGM2L1 (ENSRBIG00000043298) #31	LIPT2 (ENSRBIG00000031912)	ENSRBIG00000001091	ENSRBIG00000011853 #34	ENSRBIG00000044531 #35	CHRDL2 (ENSRBIG00000028182) #36	RNF169 (ENSRBIG00000035895) #37	XRRA1 (ENSRBIG00000036115)
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000018423.a	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181.eb.b	ENSGT00950000182944.A
Gibbon	MODERN SPECIES	5	ARAP1 (ENSNLEG00000032891)	STARD10 (ENSNLEG00000017168)	ATG16L2 (ENSNLEG00000017146)	FCHSD2 (ENSNLEG00000017136)	P2RY2 (ENSNLEG00000017134) #13	P2RY6 (ENSNLEG00000028391) #14	ARHGEF17 (ENSNLEG00000017127) #15	RELT (ENSNLEG00000017122) #16	FAM168A (ENSNLEG00000032977) #17	ENSNLEG00000035102	PLEKHB1 (ENSNLEG00000035037) #18	RAB6A (ENSNLEG00000017098) #19	MRPL48 (ENSNLEG00000017097) #21	COA4 (ENSNLEG00000017096)	ENSNLEG00000030615	PAAF1 (ENSNLEG00000017087) #22	ENSNLEG00000033687 #23	UCP2 (ENSNLEG00000017073) #24	UCP3 (ENSNLEG00000017067) #25	C2CD3 (ENSNLEG00000017035) #26	ENSNLEG00000017034	PPME1 (ENSNLEG00000029165) #27	P4HA3 (ENSNLEG00000017017) #28	PGM2L1 (ENSNLEG00000017008) #31	KCNE3 (ENSNLEG00000028730) #32	LIPT2 (ENSNLEG00000017004)	POLD3 (ENSNLEG00000016988)	CHRDL2 (ENSNLEG00000016982) #36	RNF169 (ENSNLEG00000016979) #37	ENSNLEG00000035901	XRRA1 (ENSNLEG00000016958)
Hominidae	ANCESTRAL SPECIES	1	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181.eb.b	ENSGT00950000182944.A
Orangutan	MODERN SPECIES	2	CLPB (ENSPPYG00000003651)	PDE2A (ENSPPYG00000003652)	ARAP1 (ENSPPYG00000003653)	ENSPPYG00000003654	ATG16L2 (ENSPPYG00000003655)	FCHSD2 (ENSPPYG00000003656)	P2RY2 (ENSPPYG00000003658) #13	P2RY6 (ENSPPYG00000003659) #14	ARHGEF17 (ENSPPYG00000029870) #15	RELT (ENSPPYG00000003660) #16	FAM168A (ENSPPYG00000003661) #17	PLEKHB1 (ENSPPYG00000003662) #18	RAB6A (ENSPPYG00000003663) #19	MRPL48 (ENSPPYG00000003664) #21	ENSPPYG00000003665	PAAF1 (ENSPPYG00000003666) #22	DNAJB13 (ENSPPYG00000003667) #23	UCP2 (ENSPPYG00000003668) #24	UCP3 (ENSPPYG00000003669) #25	C2CD3 (ENSPPYG00000003670) #26	PPME1 (ENSPPYG00000003671) #27	P4HA3 (ENSPPYG00000003673) #28	PGM2L1 (ENSPPYG00000003674) #31	KCNE3 (ENSPPYG00000003675) #32	LIPT2 (ENSPPYG00000003676)	POLD3 (ENSPPYG00000003677)	CHRDL2 (ENSPPYG00000003678) #36	RNF169 (ENSPPYG00000003680) #37	XRRA1 (ENSPPYG00000003681)	ENSPPYG00000034798	SPCS2 (ENSPPYG00000003682)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000011053.e.a	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181.eb.b	ENSGT00950000182944.A
Gorilla	MODERN SPECIES	2	PDE2A (ENSGGOG00000014611)	ARAP1 (ENSGGOG00000007805)	STARD10 (ENSGGOG00000012452)	ATG16L2 (ENSGGOG00000003472)	FCHSD2 (ENSGGOG00000034994)	P2RY2 (ENSGGOG00000012903) #13	P2RY6 (ENSGGOG00000008068) #14	ARHGEF17 (ENSGGOG00000010255) #15	RELT (ENSGGOG00000010271) #16	FAM168A (ENSGGOG00000010281) #17	PLEKHB1 (ENSGGOG00000011695) #18	RAB6A (ENSGGOG00000010610) #19	MRPL48 (ENSGGOG00000022915) #21	ENSGGOG00000036598	COA4 (ENSGGOG00000041718)	ENSGGOG00000014071 #22	DNAJB13 (ENSGGOG00000015952) #23	UCP2 (ENSGGOG00000003854) #24	UCP3 (ENSGGOG00000000344) #25	C2CD3 (ENSGGOG00000000345) #26	PPME1 (ENSGGOG00000000347) #27	P4HA3 (ENSGGOG00000007853) #28	PGM2L1 (ENSGGOG00000007865) #31	KCNE3 (ENSGGOG00000041355) #32	ENSGGOG00000005892	POLD3 (ENSGGOG00000012878)	CHRDL2 (ENSGGOG00000012629) #36	RNF169 (ENSGGOG00000014493) #37	XRRA1 (ENSGGOG00000014505)	SPCS2 (ENSGGOG00000014500)	NEU3 (ENSGGOG00000014507)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000011053.e.a	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181.eb.b	ENSGT00950000182944.A
Human	MODERN SPECIES	2	CLPB (ENSG00000162129)	PDE2A (ENSG00000186642)	ARAP1 (ENSG00000186635)	STARD10 (ENSG00000214530)	ATG16L2 (ENSG00000168010)	FCHSD2 (ENSG00000137478)	P2RY2 (ENSG00000175591) #13	P2RY6 (ENSG00000171631) #14	ARHGEF17 (ENSG00000110237) #15	RELT (ENSG00000054967) #16	FAM168A (ENSG00000054965) #17	PLEKHB1 (ENSG00000021300) #18	RAB6A (ENSG00000175582) #19	MRPL48 (ENSG00000175581) #21	COA4 (ENSG00000181924)	PAAF1 (ENSG00000175575) #22	DNAJB13 (ENSG00000187726) #23	UCP2 (ENSG00000175567) #24	UCP3 (ENSG00000175564) #25	C2CD3 (ENSG00000168014) #26	PPME1 (ENSG00000214517) #27	P4HA3 (ENSG00000149380) #28	PGM2L1 (ENSG00000165434) #31	KCNE3 (ENSG00000175538) #32	LIPT2 (ENSG00000175536)	POLD3 (ENSG00000077514)	CHRDL2 (ENSG00000054938) #36	RNF169 (ENSG00000166439) #37	XRRA1 (ENSG00000166435)	SPCS2 (ENSG00000118363)	NEU3 (ENSG00000162139)
Pan	ANCESTRAL SPECIES	1	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00910000144184.q.a.h	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.u #21	ENSGT00390000011053.e.a	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181.eb.b	ENSGT00950000182944.A
Chimpanzee	MODERN SPECIES	2	ARAP1 (ENSPTRG00000034443)	STARD10 (ENSPTRG00000004038)	ATG16L2 (ENSPTRG00000004039)	FCHSD2 (ENSPTRG00000004040)	ENSPTRG00000045147	P2RY2 (ENSPTRG00000004042) #13	P2RY6 (ENSPTRG00000004043) #14	ARHGEF17 (ENSPTRG00000049905) #15	RELT (ENSPTRG00000004045) #16	FAM168A (ENSPTRG00000051065) #17	PLEKHB1 (ENSPTRG00000004047) #18	RAB6A (ENSPTRG00000044137) #19	MRPL48 (ENSPTRG00000004049) #21	ENSPTRG00000045488	COA4 (ENSPTRG00000047048)	PAAF1 (ENSPTRG00000004051) #22	ENSPTRG00000049877	DNAJB13 (ENSPTRG00000047842) #23	UCP2 (ENSPTRG00000004055) #24	UCP3 (ENSPTRG00000004056) #25	C2CD3 (ENSPTRG00000004058) #26	PPME1 (ENSPTRG00000004061) #27	P4HA3 (ENSPTRG00000004063) #28	PGM2L1 (ENSPTRG00000004064) #31	KCNE3 (ENSPTRG00000038909) #32	LIPT2 (ENSPTRG00000004066)	POLD3 (ENSPTRG00000004067)	CHRDL2 (ENSPTRG00000004069) #36	RNF169 (ENSPTRG00000049248) #37	XRRA1 (ENSPTRG00000004071)	SPCS2 (ENSPTRG00000004073)
Bonobo	MODERN SPECIES	2	STARD10 (ENSPPAG00000038765)	ATG16L2 (ENSPPAG00000042061)	ENSPPAG00000042264	ENSPPAG00000043302	P2RY2 (ENSPPAG00000025105) #13	P2RY6 (ENSPPAG00000023392) #14	ARHGEF17 (ENSPPAG00000032495) #15	RELT (ENSPPAG00000030906) #16	FAM168A (ENSPPAG00000042845) #17	ENSPPAG00000039718	PLEKHB1 (ENSPPAG00000036182) #18	RAB6A (ENSPPAG00000011436) #19	MRPL48 (ENSPPAG00000039192) #21	ENSPPAG00000042931	ENSPPAG00000000692	PAAF1 (ENSPPAG00000035683) #22	ENSPPAG00000025128	DNAJB13 (ENSPPAG00000035553) #23	UCP2 (ENSPPAG00000005846) #24	UCP3 (ENSPPAG00000043137) #25	ENSPPAG00000042813 #26	PPME1 (ENSPPAG00000036326) #27	P4HA3 (ENSPPAG00000041975) #28	PGM2L1 (ENSPPAG00000029213) #31	KCNE3 (ENSPPAG00000022031) #32	LIPT2 (ENSPPAG00000034746)	POLD3 (ENSPPAG00000042261)	CHRDL2 (ENSPPAG00000028622) #36	RNF169 (ENSPPAG00000020912) #37	XRRA1 (ENSPPAG00000041615)	ENSPPAG00000043856
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Mas night monkey	MODERN SPECIES	830	PDE2A (ENSANAG00000032518)	ARAP1 (ENSANAG00000038203)	STARD10 (ENSANAG00000021823)	ATG16L2 (ENSANAG00000001465)	ENSANAG00000038483	FCHSD2 (ENSANAG00000027876)	P2RY2 (ENSANAG00000004407) #13	P2RY6 (ENSANAG00000012418) #14	ARHGEF17 (ENSANAG00000033936) #15	RELT (ENSANAG00000019742) #16	FAM168A (ENSANAG00000027985) #17	ENSANAG00000024968 #18	ENSANAG00000023642	RAB6A (ENSANAG00000036364) #19	MRPL48 (ENSANAG00000036546) #21	PAAF1 (ENSANAG00000038405) #22	DNAJB13 (ENSANAG00000037658) #23	UCP3 (ENSANAG00000025917) #25	C2CD3 (ENSANAG00000024682) #26	PPME1 (ENSANAG00000034341) #27	P4HA3 (ENSANAG00000026479) #28	PGM2L1 (ENSANAG00000024554) #31
Cebidae	ANCESTRAL SPECIES		ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Marmoset	MODERN SPECIES	2	ENSCJAG00000074795	STARD10 (ENSCJAG00000043524)	ATG16L2 (ENSCJAG00000014994)	FCHSD2 (ENSCJAG00000014990)	ENSCJAG00000084151	P2RY6 (ENSCJAG00000022091) #14	ARHGEF17 (ENSCJAG00000015946) #15	RELT (ENSCJAG00000015934) #16	FAM168A (ENSCJAG00000015915) #17	PLEKHB1 (ENSCJAG00000015909) #18	RAB6A (ENSCJAG00000039039) #19	ENSCJAG00000075097	MRPL48 (ENSCJAG00000015867) #21	ENSCJAG00000045808	ENSCJAG00000080962	PAAF1 (ENSCJAG00000015828) #22	DNAJB13 (ENSCJAG00000015823) #23	UCP2 (ENSCJAG00000073476) #24	UCP3 (ENSCJAG00000032440) #25	ENSCJAG00000002028	ENSCJAG00000083255	C2CD3 (ENSCJAG00000015764) #26	PPME1 (ENSCJAG00000015734) #27	P4HA3 (ENSCJAG00000015710) #28	ENSCJAG00000073784	PGM2L1 (ENSCJAG00000015692) #31	KCNE3 (ENSCJAG00000042738) #32	LIPT2 (ENSCJAG00000038278)	ENSCJAG00000053703	POLD3 (ENSCJAG00000015657)	CHRDL2 (ENSCJAG00000015616) #36
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00630000089910.ib.b.a	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Bolivian squirrel monkey	MODERN SPECIES	50	ARAP1 (ENSSBOG00000031716)	STARD10 (ENSSBOG00000022143)	ATG16L2 (ENSSBOG00000027588)	FCHSD2 (ENSSBOG00000018307)	ENSSBOG00000023173	ENSSBOG00000027673	ENSSBOG00000027043	P2RY2 (ENSSBOG00000010684) #13	ARHGEF17 (ENSSBOG00000024564) #15	RELT (ENSSBOG00000027236) #16	FAM168A (ENSSBOG00000005248) #17	PLEKHB1 (ENSSBOG00000033986) #18	RAB6A (ENSSBOG00000028389) #19	ENSSBOG00000014336	ENSSBOG00000028791 #21	PAAF1 (ENSSBOG00000022025) #22	ENSSBOG00000026075	DNAJB13 (ENSSBOG00000022356) #23	UCP2 (ENSSBOG00000028197) #24	UCP3 (ENSSBOG00000019272) #25	C2CD3 (ENSSBOG00000023741) #26	PPME1 (ENSSBOG00000031236) #27	P4HA3 (ENSSBOG00000021114) #28	PGM2L1 (ENSSBOG00000021467) #31	ENSSBOG00000029238	ENSSBOG00000026074	ENSSBOG00000016069	LIPT2 (ENSSBOG00000028686)	POLD3 (ENSSBOG00000026466)	CHRDL2 (ENSSBOG00000030089) #36	RNF169 (ENSSBOG00000025127) #37
Capuchin	MODERN SPECIES	79	PDE2A (ENSCCAG00000020637)	ARAP1 (ENSCCAG00000034708)	STARD10 (ENSCCAG00000027567)	ATG16L2 (ENSCCAG00000036440)	FCHSD2 (ENSCCAG00000024519)	ENSCCAG00000034490	P2RY2 (ENSCCAG00000020034) #13	P2RY6 (ENSCCAG00000019886) #14	ARHGEF17 (ENSCCAG00000029348) #15	RELT (ENSCCAG00000034344) #16	FAM168A (ENSCCAG00000021168) #17	PLEKHB1 (ENSCCAG00000020844) #18	RAB6A (ENSCCAG00000036542) #19	ENSCCAG00000028824	ENSCCAG00000024861 #21	PAAF1 (ENSCCAG00000031610) #22	DNAJB13 (ENSCCAG00000030909) #23	UCP2 (ENSCCAG00000037001) #24	UCP3 (ENSCCAG00000031398) #25	C2CD3 (ENSCCAG00000030238) #26	PPME1 (ENSCCAG00000026198) #27	P4HA3 (ENSCCAG00000020903) #28	PGM2L1 (ENSCCAG00000036451) #31	ENSCCAG00000021883	LIPT2 (ENSCCAG00000036486)	POLD3 (ENSCCAG00000020511)	CHRDL2 (ENSCCAG00000022957) #36	RNF169 (ENSCCAG00000033395) #37	XRRA1 (ENSCCAG00000028930)	SPCS2 (ENSCCAG00000021321)	NEU3 (ENSCCAG00000030531)
Tarsier	MODERN SPECIES	5595													PLEKHB1 (ENSTSYG00000013496) #18	RAB6A (ENSTSYG00000013951) #19	MRPL48 (ENSTSYG00000012895) #21	PAAF1 (ENSTSYG00000012899) #22
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Bushbaby	MODERN SPECIES	116	PDE2A (ENSOGAG00000006218)	ARAP1 (ENSOGAG00000011984)	STARD10 (ENSOGAG00000029093)	ATG16L2 (ENSOGAG00000012494)	FCHSD2 (ENSOGAG00000011995)	P2RY2 (ENSOGAG00000000742) #13	P2RY6 (ENSOGAG00000000743) #14	ARHGEF17 (ENSOGAG00000000744) #15	RELT (ENSOGAG00000000748) #16	FAM168A (ENSOGAG00000000749) #17	ENSOGAG00000033848	PLEKHB1 (ENSOGAG00000007287) #18	RAB6A (ENSOGAG00000027043) #19	ENSOGAG00000004771 #21	COA4 (ENSOGAG00000004774)	PAAF1 (ENSOGAG00000004775) #22	DNAJB13 (ENSOGAG00000024128) #23	UCP2 (ENSOGAG00000001700) #24	UCP3 (ENSOGAG00000002906) #25	C2CD3 (ENSOGAG00000001704) #26	PPME1 (ENSOGAG00000001708) #27	P4HA3 (ENSOGAG00000001712) #28	PGM2L1 (ENSOGAG00000008333) #31	KCNE3 (ENSOGAG00000032594) #32	LIPT2 (ENSOGAG00000015602)	POLD3 (ENSOGAG00000015605)	CHRDL2 (ENSOGAG00000015608) #36	RNF169 (ENSOGAG00000015611) #37	XRRA1 (ENSOGAG00000015617)	SPCS2 (ENSOGAG00000015621)	NEU3 (ENSOGAG00000015623)
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Mouse lemur	MODERN SPECIES	27	PHOX2A (ENSMICG00000004256)	CLPB (ENSMICG00000011735)	PDE2A (ENSMICG00000012366)	ARAP1 (ENSMICG00000012392)	STARD10 (ENSMICG00000029572)	ATG16L2 (ENSMICG00000012424)	FCHSD2 (ENSMICG00000012437)	ENSMICG00000029704	ARHGEF17 (ENSMICG00000016715) #15	RELT (ENSMICG00000016731) #16	FAM168A (ENSMICG00000043205) #17	ENSMICG00000031782	PLEKHB1 (ENSMICG00000003147) #18	RAB6A (ENSMICG00000031565) #19	ENSMICG00000012645 #21	PAAF1 (ENSMICG00000012657) #22	DNAJB13 (ENSMICG00000012675) #23	UCP2 (ENSMICG00000012689) #24	ENSMICG00000037420	UCP3 (ENSMICG00000012710) #25	C2CD3 (ENSMICG00000012725) #26	ENSMICG00000006164	ENSMICG00000031367	PPME1 (ENSMICG00000002244) #27	P4HA3 (ENSMICG00000002249) #28	ENSMICG00000002256 #31	LIPT2 (ENSMICG00000045741)	POLD3 (ENSMICG00000011102)	CHRDL2 (ENSMICG00000011134) #36	RNF169 (ENSMICG00000046917) #37	XRRA1 (ENSMICG00000027081)
Lemuriformes_a	ANCESTRAL SPECIES	50	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Greater bamboo lemur	MODERN SPECIES	2641																PAAF1 (ENSPSMG00000004549) #22
Coquerels sifaka	MODERN SPECIES	338	FOLR2 (ENSPCOG00000026871)	INPPL1 (ENSPCOG00000017270)	PHOX2A (ENSPCOG00000013897)	CLPB (ENSPCOG00000025816)	PDE2A (ENSPCOG00000025497)	ARAP1 (ENSPCOG00000023351)	STARD10 (ENSPCOG00000019255)	ATG16L2 (ENSPCOG00000024003)	FCHSD2 (ENSPCOG00000011232)	ARHGEF17 (ENSPCOG00000025949) #15	RELT (ENSPCOG00000014211) #16	FAM168A (ENSPCOG00000020680) #17	PLEKHB1 (ENSPCOG00000019823) #18	RAB6A (ENSPCOG00000021991) #19	ENSPCOG00000025047 #21	PAAF1 (ENSPCOG00000017138) #22	DNAJB13 (ENSPCOG00000025099) #23	UCP2 (ENSPCOG00000027332) #24	UCP3 (ENSPCOG00000018463) #25	C2CD3 (ENSPCOG00000017962) #26	PPME1 (ENSPCOG00000012571) #27	P4HA3 (ENSPCOG00000010138) #28	PGM2L1 (ENSPCOG00000026248) #31	LIPT2 (ENSPCOG00000018043)	POLD3 (ENSPCOG00000024555)	ENSPCOG00000020966	CHRDL2 (ENSPCOG00000012970) #36	RNF169 (ENSPCOG00000016721) #37	XRRA1 (ENSPCOG00000020432)	ENSPCOG00000017986	NEU3 (ENSPCOG00000014477)
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Tree shrew	MODERN SPECIES	338										ARHGEF17 (ENSTBEG00000008173) #15	FAM168A (ENSTBEG00000000424) #17	PLEKHB1 (ENSTBEG00000000628) #18	RAB6A (ENSTBEG00000000714) #19	ENSTBEG00000000809 #21	COA4 (ENSTBEG00000000928)	ENSTBEG00000001045 #22	DNAJB13 (ENSTBEG00000001351) #23	UCP2 (ENSTBEG00000001484) #24
Glires	ANCESTRAL SPECIES	1	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Rabbit	MODERN SPECIES		PDE2A (ENSOCUG00000014917)	ENSOCUG00000021605	STARD10 (ENSOCUG00000021327)	ATG16L2 (ENSOCUG00000010446)	FCHSD2 (ENSOCUG00000010457)	P2RY6 (ENSOCUG00000017568) #14	ENSOCUG00000038016	ARHGEF17 (ENSOCUG00000029716) #15	RELT (ENSOCUG00000025119) #16	ENSOCUG00000000318 #17	ENSOCUG00000024033	PLEKHB1 (ENSOCUG00000007621) #18	RAB6A (ENSOCUG00000009297) #19	ENSOCUG00000009302 #21	COA4 (ENSOCUG00000012571)	PAAF1 (ENSOCUG00000012572) #22	DNAJB13 (ENSOCUG00000012583) #23	UCP2 (ENSOCUG00000012591) #24	UCP3 (ENSOCUG00000034991) #25	ENSOCUG00000034963	C2CD3 (ENSOCUG00000004011) #26	ENSOCUG00000026735 #27	P4HA3 (ENSOCUG00000010111) #28	PGM2L1 (ENSOCUG00000005709) #31	ENSOCUG00000016447 #32	POLD3 (ENSOCUG00000002523)	CHRDL2 (ENSOCUG00000022782) #36	RNF169 (ENSOCUG00000001789) #37	ENSOCUG00000026028	XRRA1 (ENSOCUG00000012514)	ENSOCUG00000038071
Pika	MODERN SPECIES	5459													PLEKHB1 (ENSOPRG00000010340) #18	RAB6A (ENSOPRG00000010355) #19	MRPL48 (ENSOPRG00000010373) #21	PAAF1 (ENSOPRG00000010402) #22	DNAJB13 (ENSOPRG00000010422) #23	UCP2 (ENSOPRG00000010428) #24
Rodentia	ANCESTRAL SPECIES	1	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Rodentia_B	ANCESTRAL SPECIES	33	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Kangaroo rat	MODERN SPECIES	341	Pde2a (ENSDORG00000010009)	Stard10 (ENSDORG00000010017)	Atg16l2 (ENSDORG00000011918)	Fchsd2 (ENSDORG00000011922)	P2ry2 (ENSDORG00000014962) #13	ENSDORG00000028773	ENSDORG00000024940	P2ry6 (ENSDORG00000024896) #14	Arhgef17 (ENSDORG00000004680) #15	Relt (ENSDORG00000011226) #16	Fam168a (ENSDORG00000024331) #17	Plekhb1 (ENSDORG00000014122) #18	Rab6a (ENSDORG00000027784) #19	ENSDORG00000000644 #21	Coa4 (ENSDORG00000028781)	ENSDORG00000000645 #22	Dnajb13 (ENSDORG00000010103) #23	Ucp2 (ENSDORG00000010105) #24	Ucp3 (ENSDORG00000003664) #25	C2cd3 (ENSDORG00000011059) #26	Ppme1 (ENSDORG00000011061) #27	P4ha3 (ENSDORG00000011067) #28	Pgm2l1 (ENSDORG00000001675) #31	Kcne3 (ENSDORG00000028654) #32	Lipt2 (ENSDORG00000015519)	ENSDORG00000008335 #35	Chrdl2 (ENSDORG00000005504) #36	Rnf169 (ENSDORG00000009674) #37	Xrra1 (ENSDORG00000009675)	Spcs2 (ENSDORG00000009679)	Neu3 (ENSDORG00000023952)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Naked mole-rat female	MODERN SPECIES	24	ATG16L2 (ENSHGLG00000007355)	ENSHGLG00000039911	ENSHGLG00000033127	FCHSD2 (ENSHGLG00000006220)	P2RY2 (ENSHGLG00000010376) #13	P2RY6 (ENSHGLG00000009637) #14	ARHGEF17 (ENSHGLG00000006914) #15	RELT (ENSHGLG00000005986) #16	ENSHGLG00000038465	FAM168A (ENSHGLG00000004069) #17	PLEKHB1 (ENSHGLG00000002814) #18	ENSHGLG00000039787 #19	ENSHGLG00000007495	MRPL48 (ENSHGLG00000042095) #21	ENSHGLG00000005653	PAAF1 (ENSHGLG00000005640) #22	ENSHGLG00000004131 #23	UCP2 (ENSHGLG00000003606) #24	UCP3 (ENSHGLG00000003428) #25	C2CD3 (ENSHGLG00000011779) #26	PPME1 (ENSHGLG00000003747) #27	P4HA3 (ENSHGLG00000003386) #28	PGM2L1 (ENSHGLG00000010209) #31	KCNE3 (ENSHGLG00000037843) #32	LIPT2 (ENSHGLG00000008316)	POLD3 (ENSHGLG00000012230)	ENSHGLG00000021193	CHRDL2 (ENSHGLG00000013117) #36	RNF169 (ENSHGLG00000047439) #37	ENSHGLG00000038136	ENSHGLG00000004932
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Long-tailed chinchilla	MODERN SPECIES	121	ENSCLAG00000014763	PDE2A (ENSCLAG00000013636)	ARAP1 (ENSCLAG00000016265)	STARD10 (ENSCLAG00000014403)	ATG16L2 (ENSCLAG00000016529)	FCHSD2 (ENSCLAG00000015250)	P2RY2 (ENSCLAG00000016377) #13	P2RY6 (ENSCLAG00000015656) #14	ARHGEF17 (ENSCLAG00000016790) #15	RELT (ENSCLAG00000015348) #16	FAM168A (ENSCLAG00000014406) #17	PLEKHB1 (ENSCLAG00000016539) #18	RAB6A (ENSCLAG00000015536) #19	MRPL48 (ENSCLAG00000014653) #21	COA4 (ENSCLAG00000014157)	PAAF1 (ENSCLAG00000013956) #22	DNAJB13 (ENSCLAG00000015889) #23	UCP2 (ENSCLAG00000014473) #24	UCP3 (ENSCLAG00000016512) #25	C2CD3 (ENSCLAG00000015900) #26	PPME1 (ENSCLAG00000016482) #27	P4HA3 (ENSCLAG00000016260) #28	PGM2L1 (ENSCLAG00000015758) #31	KCNE3 (ENSCLAG00000016222) #32	LIPT2 (ENSCLAG00000016419)	ENSCLAG00000014255 #35	CHRDL2 (ENSCLAG00000016930) #36	RNF169 (ENSCLAG00000015974) #37	XRRA1 (ENSCLAG00000014397)	SPCS2 (ENSCLAG00000016410)	NEU3 (ENSCLAG00000015476)
Degu	MODERN SPECIES	187	ATG16L2 (ENSODEG00000007030)	ENSODEG00000008989	FCHSD2 (ENSODEG00000006875)	ENSODEG00000019749	P2RY2 (ENSODEG00000007272) #13	P2RY6 (ENSODEG00000019427) #14	ARHGEF17 (ENSODEG00000006220) #15	RELT (ENSODEG00000007100) #16	FAM168A (ENSODEG00000008605) #17	ENSODEG00000006010	ENSODEG00000005922	PLEKHB1 (ENSODEG00000006517) #18	RAB6A (ENSODEG00000005942) #19	MRPL48 (ENSODEG00000005929) #21	ENSODEG00000007008	PAAF1 (ENSODEG00000006842) #22	DNAJB13 (ENSODEG00000009167) #23	UCP2 (ENSODEG00000006654) #24	UCP3 (ENSODEG00000006219) #25	ENSODEG00000006930 #26	PPME1 (ENSODEG00000005995) #27	ENSODEG00000006708	NAALAD2 (ENSODEG00000007241)	ENSODEG00000006850	ENSODEG00000006792
Guinea pig	MODERN SPECIES	103	ENSCPOG00000022639	PDE2A (ENSCPOG00000011286)	ARAP1 (ENSCPOG00000011298)	STARD10 (ENSCPOG00000026959)	ATG16L2 (ENSCPOG00000023584)	FCHSD2 (ENSCPOG00000011328)	P2RY2 (ENSCPOG00000031185) #13	P2RY6 (ENSCPOG00000036625) #14	ARHGEF17 (ENSCPOG00000026361) #15	RELT (ENSCPOG00000024433) #16	FAM168A (ENSCPOG00000035702) #17	PLEKHB1 (ENSCPOG00000013730) #18	RAB6A (ENSCPOG00000002628) #19	MRPL48 (ENSCPOG00000013291) #21	COA4 (ENSCPOG00000039203)	PAAF1 (ENSCPOG00000013297) #22	DNAJB13 (ENSCPOG00000010693) #23	UCP2 (ENSCPOG00000010696) #24	UCP3 (ENSCPOG00000005180) #25	C2CD3 (ENSCPOG00000010703) #26	PPME1 (ENSCPOG00000003599) #27	P4HA3 (ENSCPOG00000003601) #28	PGM2L1 (ENSCPOG00000014068) #31	KCNE3 (ENSCPOG00000033408) #32	LIPT2 (ENSCPOG00000025073)	ENSCPOG00000007066	CHRDL2 (ENSCPOG00000007071) #36	RNF169 (ENSCPOG00000025687) #37	XRRA1 (ENSCPOG00000007269)	SPCS2 (ENSCPOG00000033774)	NEU3 (ENSCPOG00000006422)
Sciuridae	ANCESTRAL SPECIES	2	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Eurasian red squirrel	MODERN SPECIES	2	PDE2A (ENSSVLG00005015411)	ARAP1 (ENSSVLG00005016156)	STARD10 (ENSSVLG00005016723)	ENSSVLG00005016893	ENSSVLG00005016976	P2RY2 (ENSSVLG00005017053) #13	P2RY6 (ENSSVLG00005017079) #14	ARHGEF17 (ENSSVLG00005017138) #15	RELT (ENSSVLG00005017446) #16	FAM168A (ENSSVLG00005017595) #17	PLEKHB1 (ENSSVLG00005017735) #18	ENSSVLG00005017897 #19	ENSSVLG00005017998	MRPL48 (ENSSVLG00005018070) #21	COA4 (ENSSVLG00005018170)	PAAF1 (ENSSVLG00005018212) #22	DNAJB13 (ENSSVLG00005018360) #23	UCP2 (ENSSVLG00005018525) #24	UCP3 (ENSSVLG00005018661) #25	C2CD3 (ENSSVLG00005018889) #26	ENSSVLG00005019484	PPME1 (ENSSVLG00005019535) #27	P4HA3 (ENSSVLG00005019682) #28	PGM2L1 (ENSSVLG00005019813) #31	ENSSVLG00005019955	KCNE3 (ENSSVLG00005019987) #32	LIPT2 (ENSSVLG00005020012)	ENSSVLG00005020056	ENSSVLG00005020086	ENSSVLG00005020230	ENSSVLG00005020246
Marmotini	ANCESTRAL SPECIES	28	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769.k #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00390000009895.i.b.a	ENSGT00940000153680.b #37	ENSGT00390000016048
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000011745	PDE2A (ENSMMMG00000011641)	ARAP1 (ENSMMMG00000011395)	STARD10 (ENSMMMG00000011387)	ATG16L2 (ENSMMMG00000011309)	FCHSD2 (ENSMMMG00000011218)	P2RY2 (ENSMMMG00000011203) #13	P2RY6 (ENSMMMG00000011197) #14	ARHGEF17 (ENSMMMG00000011108) #15	RELT (ENSMMMG00000011086) #16	FAM168A (ENSMMMG00000010911) #17	PLEKHB1 (ENSMMMG00000010619) #18	ENSMMMG00000010601 #19	MRPL48 (ENSMMMG00000010576) #21	COA4 (ENSMMMG00000010569)	PAAF1 (ENSMMMG00000010553) #22	DNAJB13 (ENSMMMG00000010540) #23	UCP2 (ENSMMMG00000010534) #24	UCP3 (ENSMMMG00000010518) #25	C2CD3 (ENSMMMG00000010449) #26	PPME1 (ENSMMMG00000010421) #27	P4HA3 (ENSMMMG00000010398) #28	ENSMMMG00000010391	PGM2L1 (ENSMMMG00000010377) #31	KCNE3 (ENSMMMG00000010356) #32	ENSMMMG00000010334 #35	CHRDL2 (ENSMMMG00000010297) #36	ENSMMMG00000010292	RNF169 (ENSMMMG00000010273) #37	XRRA1 (ENSMMMG00000010212)	SPCS2 (ENSMMMG00000010185)
Marmotini_b	ANCESTRAL SPECIES	13	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769.k #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00390000009895.i.b.a	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Squirrel	MODERN SPECIES	98	ENSSTOG00000019965	PDE2A (ENSSTOG00000004792)	ARAP1 (ENSSTOG00000014711)	STARD10 (ENSSTOG00000020779)	ATG16L2 (ENSSTOG00000003790)	FCHSD2 (ENSSTOG00000003831)	P2RY2 (ENSSTOG00000029054) #13	P2RY6 (ENSSTOG00000024044) #14	ARHGEF17 (ENSSTOG00000014476) #15	RELT (ENSSTOG00000014491) #16	FAM168A (ENSSTOG00000014507) #17	PLEKHB1 (ENSSTOG00000022422) #18	ENSSTOG00000023497 #19	MRPL48 (ENSSTOG00000010694) #21	COA4 (ENSSTOG00000010697)	PAAF1 (ENSSTOG00000010701) #22	ENSSTOG00000031455	DNAJB13 (ENSSTOG00000010709) #23	UCP2 (ENSSTOG00000010715) #24	UCP3 (ENSSTOG00000004880) #25	C2CD3 (ENSSTOG00000004903) #26	PPME1 (ENSSTOG00000007881) #27	P4HA3 (ENSSTOG00000007908) #28	PGM2L1 (ENSSTOG00000012379) #31	KCNE3 (ENSSTOG00000012391) #32	LIPT2 (ENSSTOG00000026720)	POLD3 (ENSSTOG00000000455)	CHRDL2 (ENSSTOG00000000457) #36	RNF169 (ENSSTOG00000000462) #37	ENSSTOG00000034261	XRRA1 (ENSSTOG00000000466)
Arctic ground squirrel	MODERN SPECIES	680														ENSUPAG00010023132 #21	COA4 (ENSUPAG00010023131)	PAAF1 (ENSUPAG00010023126) #22	ENSUPAG00010023124	DNAJB13 (ENSUPAG00010023122) #23	UCP2 (ENSUPAG00010023121) #24	UCP3 (ENSUPAG00010023118) #25	C2CD3 (ENSUPAG00010023114) #26	PPME1 (ENSUPAG00010023113) #27	P4HA3 (ENSUPAG00010023112) #28	ENSUPAG00010023111	PGM2L1 (ENSUPAG00010023103) #31	KCNE3 (ENSUPAG00010023101) #32	LIPT2 (ENSUPAG00010023099)	ENSUPAG00010023095
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Eulipotyphla	ANCESTRAL SPECIES	768														ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22
Hedgehog	MODERN SPECIES	7398															COA4 (ENSEEUG00000010227)	PAAF1 (ENSEEUG00000010246) #22
Common shrew	MODERN SPECIES	5495														MRPL48 (ENSSARG00000003792) #21	COA4 (ENSSARG00000003846)	PAAF1 (ENSSARG00000003859) #22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Carnivora	ANCESTRAL SPECIES	21	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Caniformia	ANCESTRAL SPECIES	17	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.s #21	ENSGT00390000012955.t #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00940000154612.m.a.g.b	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.t #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00940000154612.m.a.g.b	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Ursidae	ANCESTRAL SPECIES	15	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.t #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00940000154612.m.a.g.b	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000264679	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Ursus	ANCESTRAL SPECIES	36	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.t #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000264679	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
American black bear	MODERN SPECIES	1792															ENSUAMG00000017695 #21	PAAF1 (ENSUAMG00000017691) #22	DNAJB13 (ENSUAMG00000017689) #23	UCP2 (ENSUAMG00000017688) #24	UCP3 (ENSUAMG00000017687) #25	C2CD3 (ENSUAMG00000017673) #26
Polar bear	MODERN SPECIES	302	PDE2A (ENSUMAG00000008789)	ARAP1 (ENSUMAG00000009450)	STARD10 (ENSUMAG00000009981)	ATG16L2 (ENSUMAG00000010010)	FCHSD2 (ENSUMAG00000010093)	ENSUMAG00000010124	P2RY6 (ENSUMAG00000010134) #14	ARHGEF17 (ENSUMAG00000010147) #15	ENSUMAG00000010218 #16	ENSUMAG00000010221 #16	FAM168A (ENSUMAG00000010224) #17	PLEKHB1 (ENSUMAG00000010228) #18	RAB6A (ENSUMAG00000010248) #19	MRPL48 (ENSUMAG00000010317) #21	ENSUMAG00000010323	PAAF1 (ENSUMAG00000010329) #22	ENSUMAG00000010356	DNAJB13 (ENSUMAG00000010357) #23	ENSUMAG00000010361 #24	UCP3 (ENSUMAG00000010364) #25	C2CD3 (ENSUMAG00000010411) #26	PPME1 (ENSUMAG00000010578) #27	ENSUMAG00000010596	P4HA3 (ENSUMAG00000010611) #28	PGM2L1 (ENSUMAG00000010658) #31	KCNE3 (ENSUMAG00000010667) #32	ENSUMAG00000010676	CHRDL2 (ENSUMAG00000010688) #36	ENSUMAG00000010704	ENSUMAG00000010705	SPCS2 (ENSUMAG00000010706)
Giant Panda	MODERN SPECIES	18	STARD10 (ENSAMEG00000005382)	ATG16L2 (ENSAMEG00000005345)	FCHSD2 (ENSAMEG00000005338)	ENSAMEG00000028744	ENSAMEG00000031322	P2RY2 (ENSAMEG00000020290) #13	P2RY6 (ENSAMEG00000020289) #14	ENSAMEG00000030401	ARHGEF17 (ENSAMEG00000017303) #15	RELT (ENSAMEG00000017300) #16	FAM168A (ENSAMEG00000017296) #17	PLEKHB1 (ENSAMEG00000017291) #18	RAB6A (ENSAMEG00000017285) #19	MRPL48 (ENSAMEG00000017282) #21	COA4 (ENSAMEG00000020288)	PAAF1 (ENSAMEG00000017267) #22	DNAJB13 (ENSAMEG00000017254) #23	UCP2 (ENSAMEG00000017239) #24	UCP3 (ENSAMEG00000017226) #25	C2CD3 (ENSAMEG00000017216) #26	ENSAMEG00000025260	PPME1 (ENSAMEG00000017200) #27	P4HA3 (ENSAMEG00000017190) #28	PGM2L1 (ENSAMEG00000017168) #31	KCNE3 (ENSAMEG00000020287) #32	LIPT2 (ENSAMEG00000017166)	ENSAMEG00000017155	CHRDL2 (ENSAMEG00000017149) #36	RNF169 (ENSAMEG00000017148) #37	XRRA1 (ENSAMEG00000017132)	SPCS2 (ENSAMEG00000017127)
Mustelinae	ANCESTRAL SPECIES	25	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.t #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
American mink	MODERN SPECIES	6	PDE2A (ENSNVIG00000020947)	ARAP1 (ENSNVIG00000021233)	STARD10 (ENSNVIG00000021483)	ENSNVIG00000021493	ATG16L2 (ENSNVIG00000021501)	FCSD2 (ENSNVIG00000021556)	P2RY2 (ENSNVIG00000021667) #13	P2RY6 (ENSNVIG00000021669) #14	ARHGEF17 (ENSNVIG00000021682) #15	RELT (ENSNVIG00000021738) #16	FAM168A (ENSNVIG00000021746) #17	PLEKHB1 (ENSNVIG00000021785) #18	RAB6A (ENSNVIG00000021843) #19	ENSNVIG00000021874 #21	CHCH8 (ENSNVIG00000021880)	PAAF1 (ENSNVIG00000021890) #22	ENSNVIG00000021953	DNAJB13 (ENSNVIG00000021956) #23	UCP2 (ENSNVIG00000021964) #24	UCP3 (ENSNVIG00000021995) #25	C2CD3 (ENSNVIG00000022016) #26	PPME1 (ENSNVIG00000022146) #27	P4HA3 (ENSNVIG00000022190) #28	PGM2L1 (ENSNVIG00000022233) #31	KCNE3 (ENSNVIG00000022255) #32	LIPT2 (ENSNVIG00000022257)	POLD3 (ENSNVIG00000022266)	CRDL2 (ENSNVIG00000022284) #36	RNF169 (ENSNVIG00000022325) #37	XRRA1 (ENSNVIG00000022332)	SPCS2 (ENSNVIG00000022377)
Ferret	MODERN SPECIES	294	CLPB (ENSMPUG00000010173)	PDE2A (ENSMPUG00000009843)	ARAP1 (ENSMPUG00000009828)	STARD10 (ENSMPUG00000009791)	ATG16L2 (ENSMPUG00000009778)	FCHSD2 (ENSMPUG00000009765)	ENSMPUG00000009762	P2RY2 (ENSMPUG00000019536) #13	P2RY6 (ENSMPUG00000009759) #14	ARHGEF17 (ENSMPUG00000009751) #15	RELT (ENSMPUG00000009744) #16	FAM168A (ENSMPUG00000009739) #17	PLEKHB1 (ENSMPUG00000009730) #18	RAB6A (ENSMPUG00000009724) #19	ENSMPUG00000009716 #21	PAAF1 (ENSMPUG00000009602) #22	DNAJB13 (ENSMPUG00000009521) #23	UCP2 (ENSMPUG00000009517) #24	UCP3 (ENSMPUG00000009444) #25	C2CD3 (ENSMPUG00000009422) #26	PPME1 (ENSMPUG00000009348) #27	P4HA3 (ENSMPUG00000009330) #28	PGM2L1 (ENSMPUG00000009319) #31	KCNE3 (ENSMPUG00000019533) #32	LIPT2 (ENSMPUG00000009304)	POLD3 (ENSMPUG00000009299)	CHRDL2 (ENSMPUG00000009291) #36	RNF169 (ENSMPUG00000009279) #37	XRRA1 (ENSMPUG00000009266)	SPCS2 (ENSMPUG00000009261)	NEU3 (ENSMPUG00000009248)
Canidae	ANCESTRAL SPECIES	17	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.s.a #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00940000154612.m.a.g.b	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955.s.a #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00940000154612.m.a.g.b	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Dog	MODERN SPECIES	13	PDE2A (ENSCAFG00845009737)	ARAP1 (ENSCAFG00845009338)	STARD10 (ENSCAFG00845009210)	ATG16L2 (ENSCAFG00845009039)	FCHSD2 (ENSCAFG00845008848)	P2RY2 (ENSCAFG00845008786) #13	P2RY6 (ENSCAFG00845008745) #14	ENSCAFG00845008725	ARHGEF17 (ENSCAFG00845008396) #15	RELT (ENSCAFG00845008255) #16	FAM168A (ENSCAFG00845008112) #17	PLEKHB1 (ENSCAFG00845007912) #18	RAB6A (ENSCAFG00845007667) #19	CHCHD8 (ENSCAFG00845007556)	MRPL48 (ENSCAFG00845007450) #21	PAAF1 (ENSCAFG00845007324) #22	DNAJB13 (ENSCAFG00845007267) #23	UCP2 (ENSCAFG00845007207) #24	UCP3 (ENSCAFG00845007137) #25	C2CD3 (ENSCAFG00845006752) #26	PPME1 (ENSCAFG00845006643) #27	P4HA3 (ENSCAFG00845006494) #28	PGM2L1 (ENSCAFG00845006417) #31	KCNE3 (ENSCAFG00845006390) #32	LIPT2 (ENSCAFG00845006375)	ENSCAFG00845006319	CHRDL2 (ENSCAFG00845006210) #36	RNF169 (ENSCAFG00845006177) #37	XRRA1 (ENSCAFG00845006118)	SPCS2 (ENSCAFG00845006071)	NEU3 (ENSCAFG00845006035)
Dingo	MODERN SPECIES	231	CLPB (ENSCAFG00020003227)	PDE2A (ENSCAFG00020002505)	ENSCAFG00020002418	ARAP1 (ENSCAFG00020002397)	STARD10 (ENSCAFG00020002390)	ATG16L2 (ENSCAFG00020002305)	FCHSD2 (ENSCAFG00020002270)	P2RY2 (ENSCAFG00020002261) #13	ARHGEF17 (ENSCAFG00020002239) #15	RELT (ENSCAFG00020002227) #16	FAM168A (ENSCAFG00020002220) #17	PLEKHB1 (ENSCAFG00020002214) #18	RAB6A (ENSCAFG00020002206) #19	ENSCAFG00020002202 #21	COA4 (ENSCAFG00020002196)	PAAF1 (ENSCAFG00020002194) #22	DNAJB13 (ENSCAFG00020002188) #23	UCP2 (ENSCAFG00020002181) #24	UCP3 (ENSCAFG00020002165) #25	C2CD3 (ENSCAFG00020002084) #26	ENSCAFG00020002068	PPME1 (ENSCAFG00020002049) #27	P4HA3 (ENSCAFG00020001895) #28	PGM2L1 (ENSCAFG00020001866) #31	KCNE3 (ENSCAFG00020001859) #32	LIPT2 (ENSCAFG00020001852)	POLD3 (ENSCAFG00020001837)	CHRDL2 (ENSCAFG00020001765) #36	RNF169 (ENSCAFG00020001748) #37	XRRA1 (ENSCAFG00020001674)	SPCS2 (ENSCAFG00020001665)
Red fox	MODERN SPECIES	81	PDE2A (ENSVVUG00000024655)	ARAP1 (ENSVVUG00000024634)	STARD10 (ENSVVUG00000024630)	ENSVVUG00000024628	ENSVVUG00000024623	FCHSD2 (ENSVVUG00000024614)	P2RY2 (ENSVVUG00000024610) #13	ENSVVUG00000024605	ARHGEF17 (ENSVVUG00000024591) #15	RELT (ENSVVUG00000024567) #16	FAM168A (ENSVVUG00000024558) #17	PLEKHB1 (ENSVVUG00000024552) #18	RAB6A (ENSVVUG00000024550) #19	ENSVVUG00000024543 #21	COA4 (ENSVVUG00000024540)	PAAF1 (ENSVVUG00000024532) #22	DNAJB13 (ENSVVUG00000024528) #23	UCP2 (ENSVVUG00000024525) #24	UCP3 (ENSVVUG00000024520) #25	C2CD3 (ENSVVUG00000024492) #26	PPME1 (ENSVVUG00000024480) #27	P4HA3 (ENSVVUG00000024443) #28	PGM2L1 (ENSVVUG00000024420) #31	KCNE3 (ENSVVUG00000024415) #32	LIPT2 (ENSVVUG00000024412)	POLD3 (ENSVVUG00000024403)	CHRDL2 (ENSVVUG00000024393) #36	RNF169 (ENSVVUG00000024386) #37	XRRA1 (ENSVVUG00000024378)	SPCS2 (ENSVVUG00000024376)	NEU3 (ENSVVUG00000024375)
Felidae	ANCESTRAL SPECIES		ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Panthera	ANCESTRAL SPECIES	23	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Panthera_a	ANCESTRAL SPECIES	24	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00910000147753 #30	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
lion	MODERN SPECIES	10	PDE2A (ENSPLOG00000010134)	ARAP1 (ENSPLOG00000009729)	STARD10 (ENSPLOG00000009602)	ATG16L2 (ENSPLOG00000009517)	FCHSD2 (ENSPLOG00000009289)	ENSPLOG00000009165	P2RY2 (ENSPLOG00000009141) #13	P2RY6 (ENSPLOG00000009126) #14	ARHGEF17 (ENSPLOG00000008864) #15	RELT (ENSPLOG00000008764) #16	FAM168A (ENSPLOG00000008699) #17	PLEKHB1 (ENSPLOG00000008496) #18	RAB6A (ENSPLOG00000008355) #19	MRPL48 (ENSPLOG00000008275) #21	COA4 (ENSPLOG00000008235)	PAAF1 (ENSPLOG00000008112) #22	DNAJB13 (ENSPLOG00000008016) #23	UCP2 (ENSPLOG00000007959) #24	UCP3 (ENSPLOG00000007899) #25	C2CD3 (ENSPLOG00000007682) #26	PPME1 (ENSPLOG00000007494) #27	P4HA3 (ENSPLOG00000007413) #28	PGM2L1 (ENSPLOG00000007360) #31	ENSPLOG00000007335	KCNE3 (ENSPLOG00000007327) #32	LIPT2 (ENSPLOG00000007304)	POLD3 (ENSPLOG00000007284)	CHRDL2 (ENSPLOG00000007211) #36	RNF169 (ENSPLOG00000007163) #37	XRRA1 (ENSPLOG00000007091)	SPCS2 (ENSPLOG00000006952)
leopard	MODERN SPECIES	17	ARAP1 (ENSPPRG00000008707)	STARD10 (ENSPPRG00000001129)	ATG16L2 (ENSPPRG00000000060)	FCHSD2 (ENSPPRG00000022831)	ENSPPRG00000020298	P2RY2 (ENSPPRG00000020257) #13	P2RY6 (ENSPPRG00000020229) #14	ARHGEF17 (ENSPPRG00000014870) #15	RELT (ENSPPRG00000013581) #16	FAM168A (ENSPPRG00000013109) #17	ENSPPRG00000012396	PLEKHB1 (ENSPPRG00000011240) #18	RAB6A (ENSPPRG00000009543) #19	MRPL48 (ENSPPRG00000008470) #21	COA4 (ENSPPRG00000019735)	PAAF1 (ENSPPRG00000007222) #22	DNAJB13 (ENSPPRG00000006250) #23	UCP2 (ENSPPRG00000005240) #24	UCP3 (ENSPPRG00000003873) #25	C2CD3 (ENSPPRG00000002156) #26	PPME1 (ENSPPRG00000019088) #27	P4HA3 (ENSPPRG00000016087) #28	ENSPPRG00000019390 #30	PGM2L1 (ENSPPRG00000012685) #31	ENSPPRG00000019374	KCNE3 (ENSPPRG00000019344) #32	LIPT2 (ENSPPRG00000012003)	POLD3 (ENSPPRG00000011534)	CHRDL2 (ENSPPRG00000009765) #36	RNF169 (ENSPPRG00000008146) #37	XRRA1 (ENSPPRG00000007628)
Tiger	MODERN SPECIES	152	INPPL1 (ENSPTIG00000014051)	CLPB (ENSPTIG00000010499)	PDE2A (ENSPTIG00000015974)	ARAP1 (ENSPTIG00000012516)	STARD10 (ENSPTIG00000009966)	ATG16L2 (ENSPTIG00000007319)	FCHSD2 (ENSPTIG00000020988)	ENSPTIG00000007385	ARHGEF17 (ENSPTIG00000016554) #15	RELT (ENSPTIG00000015677) #16	FAM168A (ENSPTIG00000014083) #17	PLEKHB1 (ENSPTIG00000011036) #18	RAB6A (ENSPTIG00000007843) #19	MRPL48 (ENSPTIG00000020025) #21	COA4 (ENSPTIG00000007215)	PAAF1 (ENSPTIG00000014005) #22	DNAJB13 (ENSPTIG00000012650) #23	UCP2 (ENSPTIG00000011528) #24	UCP3 (ENSPTIG00000010500) #25	C2CD3 (ENSPTIG00000006117) #26	PPME1 (ENSPTIG00000019950) #27	P4HA3 (ENSPTIG00000019317) #28	ENSPTIG00000006901 #30	PGM2L1 (ENSPTIG00000018629) #31	KCNE3 (ENSPTIG00000006865) #32	POLD3 (ENSPTIG00000016047)	CHRDL2 (ENSPTIG00000013187) #36	RNF169 (ENSPTIG00000012006) #37	XRRA1 (ENSPTIG00000006459)	SPCS2 (ENSPTIG00000002921)	NEU3 (ENSPTIG00000019876)
Cat	MODERN SPECIES	241	PDE2A (ENSFCAG00000013190)	ARAP1 (ENSFCAG00000013192)	STARD10 (ENSFCAG00000026356)	ATG16L2 (ENSFCAG00000013194)	FCHSD2 (ENSFCAG00000031954)	ENSFCAG00000034489	P2RY2 (ENSFCAG00000032749) #13	P2RY6 (ENSFCAG00000035630) #14	ARHGEF17 (ENSFCAG00000002868) #15	RELT (ENSFCAG00000002869) #16	FAM168A (ENSFCAG00000037723) #17	PLEKHB1 (ENSFCAG00000004490) #18	RAB6A (ENSFCAG00000023834) #19	MRPL48 (ENSFCAG00000025668) #21	COA4 (ENSFCAG00000028250)	PAAF1 (ENSFCAG00000026583) #22	UCP2 (ENSFCAG00000005031) #25	C2CD3 (ENSFCAG00000028884) #26	PPME1 (ENSFCAG00000026344) #27	P4HA3 (ENSFCAG00000007938) #28	PGM2L1 (ENSFCAG00000007942) #31	ENSFCAG00000025621	KCNE3 (ENSFCAG00000007946) #32	LIPT2 (ENSFCAG00000005135)	POLD3 (ENSFCAG00000008169)	CHRDL2 (ENSFCAG00000008172) #36	RNF169 (ENSFCAG00000043917) #37	XRRA1 (ENSFCAG00000014638)	SPCS2 (ENSFCAG00000022532)	NEU3 (ENSFCAG00000033977)	ENSFCAG00000036568
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Equus	ANCESTRAL SPECIES	15	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00950000186182	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Donkey	MODERN SPECIES	12	ENSEASG00005000491	PDE2A (ENSEASG00005000469)	ARAP1 (ENSEASG00005000447)	ATG16L2 (ENSEASG00005000424)	STARD10 (ENSEASG00005000436)	FCHSD2 (ENSEASG00005000113)	P2RY6 (ENSEASG00005023731) #14	ENSEASG00005032767	ARHGEF17 (ENSEASG00005017963) #15	RELT (ENSEASG00005017959) #16	FAM168A (ENSEASG00005017956) #17	PLEKHB1 (ENSEASG00005017949) #18	RAB6A (ENSEASG00005017944) #19	MRPL48 (ENSEASG00005017939) #21	COA4 (ENSEASG00005037188)	PAAF1 (ENSEASG00005017934) #22	UCP2 (ENSEASG00005017923) #24	DNAJB13 (ENSEASG00005017929) #23	UCP3 (ENSEASG00005017916) #25	ENSEASG00005017897 #26	ENSEASG00005028756 #26	PPME1 (ENSEASG00005017891) #27	P4HA3 (ENSEASG00005017878) #28	PGM2L1 (ENSEASG00005017865) #31	KCNE3 (ENSEASG00005038189) #32	LIPT2 (ENSEASG00005017860)	ENSEASG00005017856 #35	CHRDL2 (ENSEASG00005017832) #36	RNF169 (ENSEASG00005038773) #37	XRRA1 (ENSEASG00005017820)	ENSEASG00005017816
Horse	MODERN SPECIES	28	PDE2A (ENSECAG00000018696)	ARAP1 (ENSECAG00000016491)	STARD10 (ENSECAG00000015358)	ATG16L2 (ENSECAG00000013038)	FCHSD2 (ENSECAG00000011163)	P2RY2 (ENSECAG00000010577) #13	P2RY6 (ENSECAG00000038231) #14	ENSECAG00000050821	ARHGEF17 (ENSECAG00000008571) #15	RELT (ENSECAG00000007476) #16	FAM168A (ENSECAG00000006543) #17	PLEKHB1 (ENSECAG00000001466) #18	ENSECAG00000000878	RAB6A (ENSECAG00000022694) #19	MRPL48 (ENSECAG00000022115) #21	PAAF1 (ENSECAG00000020471) #22	COA4 (ENSECAG00000022111)	UCP2 (ENSECAG00000018649) #24	UCP3 (ENSECAG00000017011) #25	DNAJB13 (ENSECAG00000018671) #23	C2CD3 (ENSECAG00000012038) #26	PPME1 (ENSECAG00000010756) #27	P4HA3 (ENSECAG00000006917) #28	PGM2L1 (ENSECAG00000018803) #31	KCNE3 (ENSECAG00000007379) #32	LIPT2 (ENSECAG00000017517)	POLD3 (ENSECAG00000012624)	CHRDL2 (ENSECAG00000011897) #36	RNF169 (ENSECAG00000010781) #37	XRRA1 (ENSECAG00000007758)	SPCS2 (ENSECAG00000007179)
Chiroptera	ANCESTRAL SPECIES	5	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Microbat	MODERN SPECIES	1250									RELT (ENSMLUG00000012852) #16	FAM168A (ENSMLUG00000012861) #17	PLEKHB1 (ENSMLUG00000011085) #18	RAB6A (ENSMLUG00000016711) #19	ENSMLUG00000025918	MRPL48 (ENSMLUG00000012083) #21	ENSMLUG00000026943	PAAF1 (ENSMLUG00000012087) #22	DNAJB13 (ENSMLUG00000012101) #23	UCP2 (ENSMLUG00000012109) #24	ENSMLUG00000012118 #25	ENSMLUG00000022897	ENSMLUG00000012130 #26	PPME1 (ENSMLUG00000012151) #27	P4HA3 (ENSMLUG00000012162) #28	PGM2L1 (ENSMLUG00000025308) #31	KCNE3 (ENSMLUG00000013407) #32	LIPT2 (ENSMLUG00000028952)	ENSMLUG00000012843 #35	CHRDL2 (ENSMLUG00000014447) #36	RNF169 (ENSMLUG00000014455) #37	XRRA1 (ENSMLUG00000014461)	SPCS2 (ENSMLUG00000014468)
Greater horseshoe bat	MODERN SPECIES	2	ENSRFEG00010011712	PDE2A (ENSRFEG00010011847)	ARAP1 (ENSRFEG00010012250)	STARD10 (ENSRFEG00010013919)	ATG16L2 (ENSRFEG00010014159)	FCHSD2 (ENSRFEG00010014285)	P2RY2 (ENSRFEG00010014467) #13	P2RY6 (ENSRFEG00010014485) #14	ARHGEF17 (ENSRFEG00010014519) #15	RELT (ENSRFEG00010014926) #16	FAM168A (ENSRFEG00010014954) #17	PLEKHB1 (ENSRFEG00010015110) #18	RAB6A (ENSRFEG00010015423) #19	MRPL48 (ENSRFEG00010015570) #21	COA4 (ENSRFEG00010015696)	PAAF1 (ENSRFEG00010015721) #22	DNAJB13 (ENSRFEG00010015817) #23	Ucp2 (ENSRFEG00010015998) #25	C2CD3 (ENSRFEG00010016160) #26	PPME1 (ENSRFEG00010016253) #27	P4HA3 (ENSRFEG00010016337) #28	PGM2L1 (ENSRFEG00010016411) #31	ENSRFEG00010016450	KCNE3 (ENSRFEG00010016472) #32	LIPT2 (ENSRFEG00010016489)	POLD3 (ENSRFEG00010016519)	ENSRFEG00010016605	CHRDL2 (ENSRFEG00010016638) #36	RNF169 (ENSRFEG00010016892) #37	XRRA1 (ENSRFEG00010016995)	SPCS2 (ENSRFEG00010017525)
Megabat	MODERN SPECIES	2450														MRPL48 (ENSPVAG00000006653) #21	COA4 (ENSPVAG00000006657)	PAAF1 (ENSPVAG00000006658) #22	DNAJB13 (ENSPVAG00000006662) #23	UCP2 (ENSPVAG00000006666) #24	UCP3 (ENSPVAG00000006667) #25	ENSPVAG00000006668 #26	C2CD3 (ENSPVAG00000006669) #26	PPME1 (ENSPVAG00000006670) #27	P4HA3 (ENSPVAG00000006673) #28	PGM2L1 (ENSPVAG00000006674) #31	KCNE3 (ENSPVAG00000006675) #32	LIPT2 (ENSPVAG00000006676)	POLD3 (ENSPVAG00000006677)	CHRDL2 (ENSPVAG00000006678) #36	RNF169 (ENSPVAG00000006679) #37	XRRA1 (ENSPVAG00000006681)	SPCS2 (ENSPVAG00000006682)
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Suina	ANCESTRAL SPECIES	5	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000263806	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Pig	MODERN SPECIES	17	PDE2A (ENSSSCG00000029388)	ARAP1 (ENSSSCG00000014817)	STARD10 (ENSSSCG00000014818)	ATG16L2 (ENSSSCG00000014819)	FCHSD2 (ENSSSCG00000014820)	P2RY2 (ENSSSCG00000040207) #13	P2RY6 (ENSSSCG00000014823) #14	ENSSSCG00000014822 #15	RELT (ENSSSCG00000014825) #16	FAM168A (ENSSSCG00000039996) #17	ENSSSCG00000044826	PLEKHB1 (ENSSSCG00000014827) #18	RAB6A (ENSSSCG00000014828) #19	MRPL48 (ENSSSCG00000014829) #21	COA4 (ENSSSCG00000014830)	PAAF1 (ENSSSCG00000014831) #22	DNAJB13 (ENSSSCG00000014832) #23	UCP2 (ENSSSCG00000014833) #24	UCP3 (ENSSSCG00000014834) #25	C2CD3 (ENSSSCG00000014835) #26	PPME1 (ENSSSCG00000020856) #27	P4HA3 (ENSSSCG00000014840) #28	PGM2L1 (ENSSSCG00000014838) #31	ENSSSCG00000042110	KCNE3 (ENSSSCG00000029323) #32	LIPT2 (ENSSSCG00000024060)	POLD3 (ENSSSCG00000027506)	CHRDL2 (ENSSSCG00000014843) #36	RNF169 (ENSSSCG00000021822) #37	XRRA1 (ENSSSCG00000021702)	SPCS2 (ENSSSCG00000014850)
Chacoan peccary	MODERN SPECIES	32	CLPB (ENSCWAG00000005766)	PDE2A (ENSCWAG00000004293)	ARAP1 (ENSCWAG00000003270)	STARD10 (ENSCWAG00000003131)	ATG16L2 (ENSCWAG00000003106)	FCHSD2 (ENSCWAG00000003033)	P2RY2 (ENSCWAG00000003004) #13	P2RY6 (ENSCWAG00000002997) #14	ARHGEF17 (ENSCWAG00000002950) #15	RELT (ENSCWAG00000002926) #16	FAM168A (ENSCWAG00000002905) #17	PLEKHB1 (ENSCWAG00000002733) #18	RAB6A (ENSCWAG00000002639) #19	MRPL48 (ENSCWAG00000002611) #21	COA4 (ENSCWAG00000002600)	PAAF1 (ENSCWAG00000002555) #22	DNAJB13 (ENSCWAG00000002527) #23	UCP2 (ENSCWAG00000002493) #24	UCP3 (ENSCWAG00000002465) #25	C2CD3 (ENSCWAG00000002438) #26	ENSCWAG00000002417	PPME1 (ENSCWAG00000002394) #27	P4HA3 (ENSCWAG00000002379) #28	PGM2L1 (ENSCWAG00000002367) #31	KCNE3 (ENSCWAG00000002355) #32	LIPT2 (ENSCWAG00000002349)	ENSCWAG00000002330	CHRDL2 (ENSCWAG00000002300) #36	RNF169 (ENSCWAG00000002279) #37	XRRA1 (ENSCWAG00000002186)	SPCS2 (ENSCWAG00000002150)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Camelidae	ANCESTRAL SPECIES	32	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Arabian camel	MODERN SPECIES	1	CLPB (ENSCDRG00005001007)	PDE2A (ENSCDRG00005001163)	ARAP1 (ENSCDRG00005001520)	STARD10 (ENSCDRG00005001667)	ATG16L2 (ENSCDRG00005001813)	FCHSD2 (ENSCDRG00005001884)	P2RY2 (ENSCDRG00005001935) #13	P2RY6 (ENSCDRG00005001948) #14	ARHGEF17 (ENSCDRG00005001971) #15	RELT (ENSCDRG00005001998) #16	FAM168A (ENSCDRG00005002037) #17	PLEKHB1 (ENSCDRG00005002077) #18	RAB6A (ENSCDRG00005002194) #19	ENSCDRG00005002392 #21	COA4 (ENSCDRG00005002422)	PAAF1 (ENSCDRG00005002435) #22	DNAJB13 (ENSCDRG00005002468) #23	ENSCDRG00005002493 #24	ENSCDRG00005002523 #25	C2CD3 (ENSCDRG00005002561) #26	PPME1 (ENSCDRG00005002613) #27	P4HA3 (ENSCDRG00005002632) #28	PGM2L1 (ENSCDRG00005002666) #31	KCNE3 (ENSCDRG00005002694) #32	LIPT2 (ENSCDRG00005002708)	ENSCDRG00005002729 #35	CHRDL2 (ENSCDRG00005002767) #36	RNF169 (ENSCDRG00005002806) #37	XRRA1 (ENSCDRG00005002862)	SPCS2 (ENSCDRG00005002935)	NEU3 (ENSCDRG00005002967)
Alpaca	MODERN SPECIES	2120														MRPL48 (ENSVPAG00000004657) #21	COA4 (ENSVPAG00000004658)	PAAF1 (ENSVPAG00000004659) #22	UCP3 (ENSVPAG00000004660) #25	C2CD3 (ENSVPAG00000004661) #26	PPME1 (ENSVPAG00000004663) #27	PGM2L1 (ENSVPAG00000004665) #31	KCNE3 (ENSVPAG00000004666) #32	ENSVPAG00000004667
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Pecora	ANCESTRAL SPECIES	7	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Percora_a	ANCESTRAL SPECIES	6	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000263806	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Bovidae	ANCESTRAL SPECIES	6	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000263806	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Bovinae	ANCESTRAL SPECIES	26	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000263806	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Bos	ANCESTRAL SPECIES	25	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00940000163089.b.x.b.b.d	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000263806	ENSGT00940000161241 #36	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b	ENSGT00940000153680.b #37	ENSGT00390000016048
Bos_a	ANCESTRAL SPECIES	44	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000263806	ENSGT00940000161241 #36	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Domestic yak	MODERN SPECIES	4	PDE2A (ENSBGRG00000006673)	ARAP1 (ENSBGRG00000006242)	STARD10 (ENSBGRG00000006123)	ATG16L2 (ENSBGRG00000006010)	FCHSD2 (ENSBGRG00000005680)	P2RY2 (ENSBGRG00000005652) #13	P2RY6 (ENSBGRG00000005634) #14	ARHGEF17 (ENSBGRG00000005527) #15	RELT (ENSBGRG00000005485) #16	ENSBGRG00000005457	FAM168A (ENSBGRG00000005377) #17	PLEKHB1 (ENSBGRG00000005205) #18	RAB6A (ENSBGRG00000005036) #19	MRPL48 (ENSBGRG00000004889) #21	COA4 (ENSBGRG00000004862)	PAAF1 (ENSBGRG00000004772) #22	DNAJB13 (ENSBGRG00000004694) #23	UCP2 (ENSBGRG00000004623) #24	ENSBGRG00000004603	UCP3 (ENSBGRG00000004552) #25	ENSBGRG00000004527	C2CD3 (ENSBGRG00000004150) #26	PPME1 (ENSBGRG00000003915) #27	P4HA3 (ENSBGRG00000003823) #28	ENSBGRG00000003813	PGM2L1 (ENSBGRG00000003748) #31	ENSBGRG00000003710	KCNE3 (ENSBGRG00000024658) #32	LIPT2 (ENSBGRG00000024650)	ENSBGRG00000024546	CHRDL2 (ENSBGRG00000024469) #36
Wild yak	MODERN SPECIES	572		ARAP1 (ENSBMUG00000018772)	STARD10 (ENSBMUG00000018816)	ATG16L2 (ENSBMUG00000018861)	FCHSD2 (ENSBMUG00000018945)	P2RY2 (ENSBMUG00000018978) #13	P2RY6 (ENSBMUG00000019022) #14	ARHGEF17 (ENSBMUG00000019171) #15	RELT (ENSBMUG00000019196) #16	FAM168A (ENSBMUG00000019249) #17	ENSBMUG00000019281	PLEKHB1 (ENSBMUG00000019344) #18	RAB6A (ENSBMUG00000019456) #19	MRPL48 (ENSBMUG00000019522) #21	COA4 (ENSBMUG00000019540)	PAAF1 (ENSBMUG00000019577) #22	DNAJB13 (ENSBMUG00000019605) #23	UCP2 (ENSBMUG00000019614) #24
Bos_b	ANCESTRAL SPECIES	40	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00940000163089.b.x.b.b.d	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000263806	ENSGT00940000161241 #36	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b	ENSGT00940000153680.b #37	ENSGT00390000016048
Hybrid Bos Indicus	MODERN SPECIES	6	STARD10 (ENSBIXG00005007647)	ATG16L2 (ENSBIXG00005026829)	FCHSD2 (ENSBIXG00005026990)	P2RY2 (ENSBIXG00005004642) #13	P2RY6 (ENSBIXG00005027067) #14	ARHGEF17 (ENSBIXG00005027217) #15	RELT (ENSBIXG00005004708) #16	ENSBIXG00005005616	FAM168A (ENSBIXG00005027419) #17	PLEKHB1 (ENSBIXG00005027551) #18	ENSBIXG00005027577	RAB6A (ENSBIXG00005027661) #19	ENSBIXG00005006952	MRPL48 (ENSBIXG00005027732) #21	COA4 (ENSBIXG00005027766)	PAAF1 (ENSBIXG00005006956) #22	DNAJB13 (ENSBIXG00005027901) #23	UCP2 (ENSBIXG00005027927) #24	UCP3 (ENSBIXG00005027973) #25	ENSBIXG00005028004	ENSBIXG00005028014	C2CD3 (ENSBIXG00005028267) #26	PPME1 (ENSBIXG00005028331) #27	P4HA3 (ENSBIXG00005004876) #28	PGM2L1 (ENSBIXG00005028456) #31	KCNE3 (ENSBIXG00005028481) #32	LIPT2 (ENSBIXG00005002463)	ENSBIXG00005004912	CHRDL2 (ENSBIXG00005028567) #36	ENSBIXG00005028580	RNF169 (ENSBIXG00005028615) #37
Cow	MODERN SPECIES	6	PDE2A (ENSBTAG00000008419)	ENSBTAG00000050827	ARAP1 (ENSBTAG00000002051)	STARD10 (ENSBTAG00000015182)	ATG16L2 (ENSBTAG00000019059)	FCHSD2 (ENSBTAG00000019062)	P2RY2 (ENSBTAG00000039050) #13	P2RY6 (ENSBTAG00000038737) #14	ARHGEF17 (ENSBTAG00000012505) #15	RELT (ENSBTAG00000016494) #16	FAM168A (ENSBTAG00000016497) #17	PLEKHB1 (ENSBTAG00000009830) #18	RAB6A (ENSBTAG00000000025) #19	MRPL48 (ENSBTAG00000008347) #21	COA4 (ENSBTAG00000054199)	PAAF1 (ENSBTAG00000003679) #22	DNAJB13 (ENSBTAG00000003682) #23	UCP2 (ENSBTAG00000003692) #24	UCP3 (ENSBTAG00000005259) #25	C2CD3 (ENSBTAG00000002907) #26	C2CD3 (ENSBTAG00000054229) #26	ENSBTAG00000049655	PPME1 (ENSBTAG00000027612) #27	P4HA3 (ENSBTAG00000006579) #28	ENSBTAG00000027610	PGM2L1 (ENSBTAG00000000770) #31	KCNE3 (ENSBTAG00000011873) #32	LIPT2 (ENSBTAG00000008227)	POLD3 (ENSBTAG00000016869)	CHRDL2 (ENSBTAG00000021306) #36	RNF169 (ENSBTAG00000000727) #37
American bison	MODERN SPECIES	3192											ENSBBBG00000011469	PLEKHB1 (ENSBBBG00000002103) #18	RAB6A (ENSBBBG00000011397) #19	MRPL48 (ENSBBBG00000011362) #21	COA4 (ENSBBBG00000011333)	PAAF1 (ENSBBBG00000011322) #22	DNAJB13 (ENSBBBG00000011282) #23	UCP2 (ENSBBBG00000002051) #24	UCP3 (ENSBBBG00000011248) #25	C2CD3 (ENSBBBG00000002045) #26	PPME1 (ENSBBBG00000011170) #27	P4HA3 (ENSBBBG00000011150) #28	PGM2L1 (ENSBBBG00000011134) #31	KCNE3 (ENSBBBG00000011118) #32	LIPT2 (ENSBBBG00000011117)	POLD3 (ENSBBBG00000002001)	CHRDL2 (ENSBBBG00000001997) #36	RNF169 (ENSBBBG00000011082) #37	XRRA1 (ENSBBBG00000011070)	SPCS2 (ENSBBBG00000011026)
Caprinae	ANCESTRAL SPECIES	6	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01100000263806	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Goat	MODERN SPECIES	6	ENSCHIG00000003542	ARAP1 (ENSCHIG00000015180)	STARD10 (ENSCHIG00000013843)	ATG16L2 (ENSCHIG00000001510)	FCHSD2 (ENSCHIG00000007132)	ENSCHIG00000016375	P2RY2 (ENSCHIG00000009730) #13	P2RY6 (ENSCHIG00000005302) #14	ARHGEF17 (ENSCHIG00000001133) #15	RELT (ENSCHIG00000014926) #16	FAM168A (ENSCHIG00000026181) #17	PLEKHB1 (ENSCHIG00000022910) #18	RAB6A (ENSCHIG00000023957) #19	MRPL48 (ENSCHIG00000013981) #21	COA4 (ENSCHIG00000022502)	PAAF1 (ENSCHIG00000001205) #22	DNAJB13 (ENSCHIG00000014945) #23	UCP2 (ENSCHIG00000016684) #24	UCP3 (ENSCHIG00000021029) #25	C2CD3 (ENSCHIG00000010366) #26	PPME1 (ENSCHIG00000013753) #27	P4HA3 (ENSCHIG00000021364) #28	PGM2L1 (ENSCHIG00000025872) #31	KCNE3 (ENSCHIG00000004672) #32	ENSCHIG00000008399	LIPT2 (ENSCHIG00000023926)	ENSCHIG00000023669	CHRDL2 (ENSCHIG00000015102) #36	RNF169 (ENSCHIG00000006555) #37	XRRA1 (ENSCHIG00000022337)	SPCS2 (ENSCHIG00000010577)
Rambouillet Sheep	MODERN SPECIES	6	ARAP1 (ENSOARG00020020836)	STARD10 (ENSOARG00020022516)	ATG16L2 (ENSOARG00020022612)	FCHSD2 (ENSOARG00020022738)	P2RY2 (ENSOARG00020023482) #13	P2RY6 (ENSOARG00020023489) #14	ARHGEF17 (ENSOARG00020023502) #15	RELT (ENSOARG00020023665) #16	FAM168A (ENSOARG00020023710) #17	ENSOARG00020023835	ENSOARG00020023849	PLEKHB1 (ENSOARG00020023874) #18	RAB6A (ENSOARG00020023982) #19	MRPL48 (ENSOARG00020024055) #21	COA4 (ENSOARG00020024088)	PAAF1 (ENSOARG00020024109) #22	DNAJB13 (ENSOARG00020024172) #23	UCP2 (ENSOARG00020024218) #24	UCP3 (ENSOARG00020003230) #25	C2CD3 (ENSOARG00020003293) #26	PPME1 (ENSOARG00020003715) #27	P4HA3 (ENSOARG00020003763) #28	PGM2L1 (ENSOARG00020003843) #31	KCNE3 (ENSOARG00020003867) #32	LIPT2 (ENSOARG00020003884)	POLD3 (ENSOARG00020003908)	CHRDL2 (ENSOARG00020003968) #36	RNF169 (ENSOARG00020004047) #37	XRRA1 (ENSOARG00020004106)	SPCS2 (ENSOARG00020004400)	NEU3 (ENSOARG00020004457)
Siberian musk deer	MODERN SPECIES	1173	ARAP1 (ENSMMSG00000013210)	STARD10 (ENSMMSG00000013122)	ATG16L2 (ENSMMSG00000013029)	FCHSD2 (ENSMMSG00000012938)	P2RY2 (ENSMMSG00000012914) #13	P2RY6 (ENSMMSG00000012905) #14	ARHGEF17 (ENSMMSG00000012780) #15	RELT (ENSMMSG00000012747) #16	FAM168A (ENSMMSG00000012683) #17	PLEKHB1 (ENSMMSG00000012555) #18	ENSMMSG00000012526	ENSMMSG00000012512	RAB6A (ENSMMSG00000012369) #19	MRPL48 (ENSMMSG00000012274) #21	COA4 (ENSMMSG00000012261)	PAAF1 (ENSMMSG00000012220) #22	DNAJB13 (ENSMMSG00000012170) #23	UCP2 (ENSMMSG00000012130) #24	ENSMMSG00000012118	UCP3 (ENSMMSG00000012079) #25	C2CD3 (ENSMMSG00000011889) #26	PPME1 (ENSMMSG00000011768) #27	P4HA3 (ENSMMSG00000011730) #28	PGM2L1 (ENSMMSG00000011704) #31	KCNE3 (ENSMMSG00000011690) #32	LIPT2 (ENSMMSG00000011677)	ENSMMSG00000011605	CHRDL2 (ENSMMSG00000011519) #36	RNF169 (ENSMMSG00000011474) #37	XRRA1 (ENSMMSG00000011230)	ENSMMSG00000011190
Yarkand deer	MODERN SPECIES		PDE2A (ENSCHYG00000001472)	ARAP1 (ENSCHYG00000001833)	STARD10 (ENSCHYG00000002286)	ATG16L2 (ENSCHYG00000002383)	FCHSD2 (ENSCHYG00000002479)	ENSCHYG00000002551	P2RY2 (ENSCHYG00000002560) #13	P2RY6 (ENSCHYG00000002581) #14	ARHGEF17 (ENSCHYG00000002628) #15	RELT (ENSCHYG00000002882) #16	FAM168A (ENSCHYG00000002915) #17	PLEKHB1 (ENSCHYG00000002978) #18	RAB6A (ENSCHYG00000003068) #19	MRPL48 (ENSCHYG00000003097) #21	COA4 (ENSCHYG00000003133)	PAAF1 (ENSCHYG00000003143) #22	ENSCHYG00000003273	DNAJB13 (ENSCHYG00000003279) #23	UCP2 (ENSCHYG00000003304) #24	ENSCHYG00000003318	UCP3 (ENSCHYG00000003329) #25	C2CD3 (ENSCHYG00000003384) #26	PPME1 (ENSCHYG00000003704) #27	PGM2L1 (ENSCHYG00000003778) #31	KCNE3 (ENSCHYG00000003907) #32	LIPT2 (ENSCHYG00000003910)	POLD3 (ENSCHYG00000003916)	CHRDL2 (ENSCHYG00000003936) #36	RNF169 (ENSCHYG00000003956) #37	XRRA1 (ENSCHYG00000003983)	ENSCHYG00000004004
Cetacea	ANCESTRAL SPECIES	4	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B.h.b.a #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Blue whale	MODERN SPECIES	19	ENSBMSG00010019360	PDE2A (ENSBMSG00010017836)	ARAP1 (ENSBMSG00010015454)	STARD10 (ENSBMSG00010015245)	ATG16L2 (ENSBMSG00010015158)	FCHSD2 (ENSBMSG00010015023)	P2RY2 (ENSBMSG00010014980) #13	P2RY6 (ENSBMSG00010014966) #14	ARHGEF17 (ENSBMSG00010014835) #15	RELT (ENSBMSG00010014757) #16	FAM168A (ENSBMSG00010014681) #17	PLEKHB1 (ENSBMSG00010014530) #18	RAB6A (ENSBMSG00010014390) #19	ENSBMSG00010014306 #21	COA4 (ENSBMSG00010014283)	PAAF1 (ENSBMSG00010014247) #22	DNAJB13 (ENSBMSG00010014170) #23	UCP2 (ENSBMSG00010014121) #24	UCP3 (ENSBMSG00010014042) #25	C2CD3 (ENSBMSG00010013974) #26	PPME1 (ENSBMSG00010013879) #27	P4HA3 (ENSBMSG00010013836) #28	ENSBMSG00010007257	PGM2L1 (ENSBMSG00010007245) #31	ENSBMSG00010007235 #32	LIPT2 (ENSBMSG00010007226)	POLD3 (ENSBMSG00010007215)	CHRDL2 (ENSBMSG00010007185) #36	RNF169 (ENSBMSG00010007157) #37	XRRA1 (ENSBMSG00010007133)	ENSBMSG00010007104
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B.h.b.a #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Sperm whale	MODERN SPECIES	7	FOLR2 (ENSPCTG00005019879)	INPPL1 (ENSPCTG00005019784)	PHOX2A (ENSPCTG00005019740)	CLPB (ENSPCTG00005019599)	FCHSD2 (ENSPCTG00005019385)	ATG16L2 (ENSPCTG00005019127)	STARD10 (ENSPCTG00005019006)	P2RY6 (ENSPCTG00005018990) #14	PDE2A (ENSPCTG00005017229)	ENSPCTG00005017089	PLEKHB1 (ENSPCTG00005016848) #18	RAB6A (ENSPCTG00005016426) #19	ENSPCTG00005016368	MRPL48 (ENSPCTG00005016115) #21	COA4 (ENSPCTG00005016081)	PAAF1 (ENSPCTG00005016004) #22	DNAJB13 (ENSPCTG00005015810) #23	UCP2 (ENSPCTG00005015725) #24	UCP3 (ENSPCTG00005015578) #25	C2CD3 (ENSPCTG00005015258) #26	ENSPCTG00005015122 #27	P4HA3 (ENSPCTG00005015054) #28	PGM2L1 (ENSPCTG00005014991) #31	KCNE3 (ENSPCTG00005014974) #32	ENSPCTG00005014938	LIPT2 (ENSPCTG00005014884)	POLD3 (ENSPCTG00005014767)	CHRDL2 (ENSPCTG00005014720) #36	ENSPCTG00005014677	RNF169 (ENSPCTG00005014594) #37	XRRA1 (ENSPCTG00005014504)
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B.h.b.a #32	ENSGT00390000006450	ENSGT01100000263806	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Dolphin	MODERN SPECIES	3413												PLEKHB1 (ENSTTRG00000005360) #18	RAB6A (ENSTTRG00000005374) #19	MRPL48 (ENSTTRG00000005403) #21	COA4 (ENSTTRG00000005413)	PAAF1 (ENSTTRG00000005417) #22	DNAJB13 (ENSTTRG00000005442) #23	UCP2 (ENSTTRG00000005457) #24	UCP3 (ENSTTRG00000005466) #25	ENSTTRG00000005477 #26	ENSTTRG00000005487 #26	PPME1 (ENSTTRG00000005512) #27	P4HA3 (ENSTTRG00000005522) #28	PGM2L1 (ENSTTRG00000005528) #31
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B.h.b.a #32	ENSGT01000000221138	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Vaquita	MODERN SPECIES	19	ARAP1 (ENSPSNG00000009314)	STARD10 (ENSPSNG00000008954)	ATG16L2 (ENSPSNG00000008907)	FCHSD2 (ENSPSNG00000008732)	P2RY2 (ENSPSNG00000008662) #13	P2RY6 (ENSPSNG00000008640) #14	ARHGEF17 (ENSPSNG00000008413) #15	RELT (ENSPSNG00000008355) #16	FAM168A (ENSPSNG00000008263) #17	PLEKHB1 (ENSPSNG00000008110) #18	ENSPSNG00000008072	RAB6A (ENSPSNG00000007957) #19	ENSPSNG00000007883	MRPL48 (ENSPSNG00000007828) #21	COA4 (ENSPSNG00000007792)	PAAF1 (ENSPSNG00000007744) #22	DNAJB13 (ENSPSNG00000007650) #23	UCP2 (ENSPSNG00000007594) #24	UCP3 (ENSPSNG00000007548) #25	C2CD3 (ENSPSNG00000007424) #26	PPME1 (ENSPSNG00000007333) #27	P4HA3 (ENSPSNG00000007275) #28	PGM2L1 (ENSPSNG00000007242) #31	ENSPSNG00000007219 #32	ENSPSNG00000007198	LIPT2 (ENSPSNG00000007174)	POLD3 (ENSPSNG00000007123)	CHRDL2 (ENSPSNG00000007083) #36	RNF169 (ENSPSNG00000007029) #37	XRRA1 (ENSPSNG00000006930)	ENSPSNG00000006830
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B.h.b.a #32	ENSGT01000000221138	ENSGT00390000006450	ENSGT01100000263806	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Narwhal	MODERN SPECIES	314	PDE2A (ENSMMNG00015017771)	ARAP1 (ENSMMNG00015017106)	STARD10 (ENSMMNG00015016937)	ATG16L2 (ENSMMNG00015016662)	FCHSD2 (ENSMMNG00015016529)	P2RY2 (ENSMMNG00015016460) #13	P2RY6 (ENSMMNG00015016438) #14	ARHGEF17 (ENSMMNG00015016352) #15	RELT (ENSMMNG00015016271) #16	FAM168A (ENSMMNG00015016125) #17	PLEKHB1 (ENSMMNG00015015978) #18	ENSMMNG00015015911	RAB6A (ENSMMNG00015015834) #19	MRPL48 (ENSMMNG00015020727) #21	COA4 (ENSMMNG00015020706)	PAAF1 (ENSMMNG00015020687) #22	DNAJB13 (ENSMMNG00015020642) #23	UCP2 (ENSMMNG00015020552) #24	UCP3 (ENSMMNG00015020523) #25	C2CD3 (ENSMMNG00015020457) #26	PPME1 (ENSMMNG00015020414) #27	PGM2L1 (ENSMMNG00015020391) #31	ENSMMNG00015020370 #32	LIPT2 (ENSMMNG00015020361)	ENSMMNG00015020343	CHRDL2 (ENSMMNG00015020311) #36	RNF169 (ENSMMNG00015020277) #37	XRRA1 (ENSMMNG00015020206)	ENSMMNG00015020124	NEU3 (ENSMMNG00015020097)	SLCO2B1 (ENSMMNG00015019988)
Beluga whale	MODERN SPECIES	2	ARAP1 (ENSDLEG00000000824)	STARD10 (ENSDLEG00000001848)	ATG16L2 (ENSDLEG00000001882)	FCHSD2 (ENSDLEG00000002069)	P2RY2 (ENSDLEG00000002113) #13	P2RY6 (ENSDLEG00000002120) #14	ARHGEF17 (ENSDLEG00000002164) #15	RELT (ENSDLEG00000002338) #16	FAM168A (ENSDLEG00000002357) #17	PLEKHB1 (ENSDLEG00000002396) #18	RAB6A (ENSDLEG00000002432) #19	ENSDLEG00000002441	ENSDLEG00000002450	ENSDLEG00000002454 #21	COA4 (ENSDLEG00000002460)	PAAF1 (ENSDLEG00000002470) #22	DNAJB13 (ENSDLEG00000002482) #23	UCP2 (ENSDLEG00000002495) #24	UCP3 (ENSDLEG00000002511) #25	C2CD3 (ENSDLEG00000002578) #26	PPME1 (ENSDLEG00000002797) #27	P4HA3 (ENSDLEG00000002804) #28	PGM2L1 (ENSDLEG00000002819) #31	KCNE3 (ENSDLEG00000002833) #32	ENSDLEG00000002840	LIPT2 (ENSDLEG00000002850)	POLD3 (ENSDLEG00000002858)	CHRDL2 (ENSDLEG00000002872) #36	RNF169 (ENSDLEG00000002883) #37	XRRA1 (ENSDLEG00000002903)	ENSDLEG00000002925
Atlantogenata	ANCESTRAL SPECIES	35	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT01060000248648	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181
Xenarthra	ANCESTRAL SPECIES	969														ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24
Armadillo	MODERN SPECIES	2420													ENSDNOG00000008487	MRPL48 (ENSDNOG00000002177) #21	COA4 (ENSDNOG00000008154)	PAAF1 (ENSDNOG00000045529) #22	DNAJB13 (ENSDNOG00000000529) #23	UCP2 (ENSDNOG00000031735) #24	ENSDNOG00000040697
Afrotheria	ANCESTRAL SPECIES	41	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Tenrec	MODERN SPECIES	4395																ENSETEG00000005155 #22
Afrotheria_a	ANCESTRAL SPECIES	71	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Elephant	MODERN SPECIES	563	ATG16L2 (ENSLAFG00000000256)	FCHSD2 (ENSLAFG00000000261)	ENSLAFG00000027005	ENSLAFG00000029551	ENSLAFG00000032659	ENSLAFG00000028873	P2RY2 (ENSLAFG00000007522) #13	P2RY6 (ENSLAFG00000026339) #14	ARHGEF17 (ENSLAFG00000000317) #15	RELT (ENSLAFG00000032146) #16	FAM168A (ENSLAFG00000014795) #17	PLEKHB1 (ENSLAFG00000011858) #18	RAB6A (ENSLAFG00000011862) #19	MRPL48 (ENSLAFG00000003800) #21	COA4 (ENSLAFG00000003805)	PAAF1 (ENSLAFG00000003807) #22	DNAJB13 (ENSLAFG00000032032) #23	UCP2 (ENSLAFG00000015866) #24	UCP3 (ENSLAFG00000005399) #25	ENSLAFG00000005407 #26	PPME1 (ENSLAFG00000005421) #27	P4HA3 (ENSLAFG00000022200) #28	PGM2L1 (ENSLAFG00000002883) #31	KCNE3 (ENSLAFG00000022215) #32	LIPT2 (ENSLAFG00000012749)	ENSLAFG00000004098 #35	CHRDL2 (ENSLAFG00000009783) #36	RNF169 (ENSLAFG00000005991) #37	XRRA1 (ENSLAFG00000005994)	SPCS2 (ENSLAFG00000005996)	NEU3 (ENSLAFG00000016015)
Hyrax	MODERN SPECIES	6111																PAAF1 (ENSPCAG00000003985) #22
Marsupialia	ANCESTRAL SPECIES	28		ENSGT00940000159817	ENSGT00940000157424.i	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Opossum	MODERN SPECIES	3	STARD10 (ENSMODG00000007754)	ENSMODG00000007739	FCHSD2 (ENSMODG00000007713)	P2RY2 (ENSMODG00000007664) #13	P2RY6 (ENSMODG00000024017) #14	ENSMODG00000007659	ENSMODG00000027720	ARHGEF17 (ENSMODG00000007653) #15	RELT (ENSMODG00000007624) #16	FAM168A (ENSMODG00000007608) #17	ENSMODG00000024019 #18	RAB6A (ENSMODG00000007600) #19	MRPL48 (ENSMODG00000007576) #21	ENSMODG00000024020	ENSMODG00000049432	PAAF1 (ENSMODG00000007569) #22	DNAJB13 (ENSMODG00000007547) #23	UCP2 (ENSMODG00000007498) #24	UCP3 (ENSMODG00000007461) #25	C2CD3 (ENSMODG00000007448) #26	PPME1 (ENSMODG00000007418) #27	P4HA3 (ENSMODG00000007397) #28	PGM2L1 (ENSMODG00000007336) #31	KCNE3 (ENSMODG00000007209) #32	LIPT2 (ENSMODG00000007202)	ENSMODG00000007196	CHRDL2 (ENSMODG00000007176) #36	RNF169 (ENSMODG00000007163) #37	XRRA1 (ENSMODG00000007151)	SPCS2 (ENSMODG00000042403)	NEU3 (ENSMODG00000039572)
Marsupialia_b	ANCESTRAL SPECIES	20		ENSGT00940000159817	ENSGT00940000157424.i	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Diprotodontia	ANCESTRAL SPECIES	24		ENSGT00940000159817	ENSGT00940000157424.h.a	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524 #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Diprotodontia_a	ANCESTRAL SPECIES	25	ENSGT00940000159817	ENSGT00940000157424.h.a	ENSGT00510000047611	ENSGT00390000014786.m.a.b	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b #13	ENSGT01030000234621.C.a.b #14	ENSGT00940000153798.B #15	ENSGT00940000160350 #16	ENSGT00390000005140.b.a #17	ENSGT00390000013989.b #18	ENSGT00940000154769 #19	ENSGT00390000012955 #21	ENSGT00390000008503	ENSGT00390000005948 #22	ENSGT00940000158090 #23	ENSGT00940000159524.n #24	ENSGT00940000161030 #25	ENSGT00510000048072 #26	ENSGT00390000004396 #27	ENSGT00940000158967 #28	ENSGT00940000158353 #31	ENSGT00940000155001.B #32	ENSGT00390000006450	ENSGT00940000163239 #35	ENSGT00940000161241 #36	ENSGT00940000153680.b #37	ENSGT00390000016048	ENSGT00440000038181	ENSGT00950000182944.A
Common wonbat	MODERN SPECIES	342	ENSVURG00010021842	ENSVURG00010021846	PDE2A (ENSVURG00010018255)	STARD10 (ENSVURG00010018022)	ENSVURG00010018019	ATG16L2 (ENSVURG00010017997)	FCHSD2 (ENSVURG00010017982)	P2RY2 (ENSVURG00010017974) #13	P2RY6 (ENSVURG00010017965) #14	ARHGEF17 (ENSVURG00010017953) #15	FAM168A (ENSVURG00010017949) #17	PLEKHB1 (ENSVURG00010017944) #18	RAB6A (ENSVURG00010017939) #19	MRPL48 (ENSVURG00010017937) #21	COA4 (ENSVURG00010017934)	PAAF1 (ENSVURG00010017927) #22	DNAJB13 (ENSVURG00010017923) #23	ENSVURG00010017918 #24	UCP3 (ENSVURG00010017912) #25	C2CD3 (ENSVURG00010017401) #26	PPME1 (ENSVURG00010017299) #27	P4HA3 (ENSVURG00010017249) #28	PGM2L1 (ENSVURG00010017230) #31	KCNE3 (ENSVURG00010017220) #32	LIPT2 (ENSVURG00010017202)	ENSVURG00010017183	CHRDL2 (ENSVURG00010017166) #36	ENSVURG00010017157 #37	XRRA1 (ENSVURG00010017136)	NEU3 (ENSVURG00010017132)	ENSVURG00010017126
koala	MODERN SPECIES	35	ENSPCIG00000010511	PDE2A (ENSPCIG00000010517)	ARAP1 (ENSPCIG00000010521)	STARD10 (ENSPCIG00000010527)	ENSPCIG00000010530	ATG16L2 (ENSPCIG00000010532)	FCHSD2 (ENSPCIG00000010537)	P2RY2 (ENSPCIG00000021793) #13	ARHGEF17 (ENSPCIG00000021796) #15	RELT (ENSPCIG00000021800) #16	FAM168A (ENSPCIG00000021803) #17	ENSPCIG00000021809 #18	RAB6A (ENSPCIG00000021810) #19	MRPL48 (ENSPCIG00000021813) #21	COA4 (ENSPCIG00000021814)	PAAF1 (ENSPCIG00000021816) #22	ENSPCIG00000033407	DNAJB13 (ENSPCIG00000021818) #23	ENSPCIG00000021820 #24	UCP3 (ENSPCIG00000021821) #25	C2CD3 (ENSPCIG00000021823) #26	PPME1 (ENSPCIG00000021824) #27	P4HA3 (ENSPCIG00000021825) #28	PGM2L1 (ENSPCIG00000021827) #31	KCNE3 (ENSPCIG00000021830) #32	LIPT2 (ENSPCIG00000021831)	ENSPCIG00000021832 #35	CHRDL2 (ENSPCIG00000021833) #36	ENSPCIG00000021835	SPCS2 (ENSPCIG00000021840)	NEU3 (ENSPCIG00000021841)
Wallaby	MODERN SPECIES	7260															COA4 (ENSMEUG00000016385)	PAAF1 (ENSMEUG00000016396) #22
Tasmanian devil	MODERN SPECIES	2	AQP11 (ENSSHAG00000030748)	ENSSHAG00000009267	ARAP1 (ENSSHAG00000007451)	STARD10 (ENSSHAG00000032218)	ATG16L2 (ENSSHAG00000005731)	FCHSD2 (ENSSHAG00000000988)	P2RY2 (ENSSHAG00000027090) #13	P2RY6 (ENSSHAG00000022365) #14	ENSSHAG00000008231 #15	RELT (ENSSHAG00000007388) #16	FAM168A (ENSSHAG00000005776) #17	PLEKHB1 (ENSSHAG00000002591) #18	ENSSHAG00000022606 #19	MRPL48 (ENSSHAG00000014091) #21	ENSSHAG00000025393	PAAF1 (ENSSHAG00000013811) #22	DNAJB13 (ENSSHAG00000013715) #23	UCP2 (ENSSHAG00000028458) #24	UCP3 (ENSSHAG00000013494) #25	ENSSHAG00000012678 #26	PPME1 (ENSSHAG00000012353) #27	P4HA3 (ENSSHAG00000012092) #28	PGM2L1 (ENSSHAG00000011567) #31	KCNE3 (ENSSHAG00000023197) #32	LIPT2 (ENSSHAG00000026717)	ENSSHAG00000010021 #35	CHRDL2 (ENSSHAG00000008806) #36	RNF169 (ENSSHAG00000032266) #37	XRRA1 (ENSSHAG00000006643)	SPCS2 (ENSSHAG00000005389)	ENSSHAG00000021653
Platypus	MODERN SPECIES	12	MOGAT2 (ENSOANG00000009381)	ENSOANG00000045504	SERPINH1 (ENSOANG00000012755)	GDPD5 (ENSOANG00000019968)	ENSOANG00000044114	FCHSD2 (ENSOANG00000008170)	ENSOANG00000045391	P2RY2 (ENSOANG00000014477) #13	ARHGEF17 (ENSOANG00000029019) #15	RELT (ENSOANG00000045470) #16	FAM168A (ENSOANG00000035982) #17	ENSOANG00000048151 #18	ENSOANG00000037519 #19	MRPL48 (ENSOANG00000013906) #21	COA4 (ENSOANG00000013905)	PAAF1 (ENSOANG00000013904) #22	DNAJB13 (ENSOANG00000044879) #23	ENSOANG00000007210 #24	UCP3 (ENSOANG00000007738) #25	C2CD3 (ENSOANG00000007736) #26	PPME1 (ENSOANG00000006333) #27