Theria	ANCESTRAL SPECIES	9	ENSGT00940000162088	ENSGT00940000163841	ENSGT00940000153980	ENSGT00950000183407	ENSGT00940000159486	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000156135	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT01100000265611	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT01100000265611	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000159486	ENSGT00940000154448.b.b.b.b	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000159486.ab	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160443	ENSGT00940000160295 #9	ENSGT00390000001157.A.b #14	ENSGT00940000162756	ENSGT00730000111539	ENSGT00390000001157.A.a ##14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160443	ENSGT00940000160295 #9	ENSGT00390000001157.A.b #14	ENSGT00940000162756	ENSGT00730000111539	ENSGT00730000111511	ENSGT00390000001157.A.a ##14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Camelidae	ANCESTRAL SPECIES	60						ENSGT00940000159486.ab.a.a.a	ENSGT00940000162736 #7	ENSGT00940000160295.t #10	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
Arabian camel	MODERN SPECIES	7	ENSCDRG00005008781 #7	ENSCDRG00005008758 #8	ENSCDRG00005008736 #9	ENSCDRG00005008718 #10	ENSCDRG00005008703 #11	ENSCDRG00005008691 #12	ENSCDRG00005008658 #13	KRTAP3-1 (ENSCDRG00005008632) #14	ENSCDRG00005008593 #15	ENSCDRG00005008570 #16	ENSCDRG00005008551 #17	KRT40 (ENSCDRG00005008540) #18	KRT39 (ENSCDRG00005008468) #19	KRT23 (ENSCDRG00005008329) #20	KRT20 (ENSCDRG00005008233) #21	KRT12 (ENSCDRG00005008188) #22	KRT10 (ENSCDRG00005008151) #23	KRT28 (ENSCDRG00005008097) #24	KRT27 (ENSCDRG00005008025) #25	KRT26 (ENSCDRG00005007950) #26	KRT25 (ENSCDRG00005007856) #27	KRT24 (ENSCDRG00005007765) #28	KRT222 (ENSCDRG00005007721) #29	SMARCE1 (ENSCDRG00005007508) #30	CCR7 (ENSCDRG00005007460) #31	TNS4 (ENSCDRG00005007372) #32	IGFBP4 (ENSCDRG00005007330) #33	TOP2A (ENSCDRG00005007292) #34	RARA (ENSCDRG00005007055) #35	CDC6 (ENSCDRG00005006919) #36	WIPF2 (ENSCDRG00005006814) #37
Alpaca	DUPLICATION
Alpaca	MODERN SPECIES	2122							ENSVPAG00000000998 #7	ENSVPAG00000015470 #10	ENSVPAG00000015521 #9	KRTAP3-1 (ENSVPAG00000000997) #14	ENSVPAG00000000996 #16	ENSVPAG00000000995 #16	KRT40 (ENSVPAG00000000994) #18	KRT23 (ENSVPAG00000000993) #20	ENSVPAG00000000990 #21	KRT12 (ENSVPAG00000000988) #22	KRT10 (ENSVPAG00000000987) #23	KRT28 (ENSVPAG00000000986) #24	KRT27 (ENSVPAG00000000985) #25	KRT26 (ENSVPAG00000000983) #26	KRT25 (ENSVPAG00000000982) #27	ENSVPAG00000000981 #22	KRT222 (ENSVPAG00000000980) #29	SMARCE1 (ENSVPAG00000000979) #30
Alpaca	MODERN SPECIES	2122	ENSVPAG00000000998 #7	ENSVPAG00000015470 #10	ENSVPAG00000015521 #9	KRTAP3-1 (ENSVPAG00000000997) #14	ENSVPAG00000000996 #16	ENSVPAG00000000995 #16	KRT40 (ENSVPAG00000000994) #18	KRT23 (ENSVPAG00000000993) #20	ENSVPAG00000000990 #21	KRT12 (ENSVPAG00000000988) #22	KRT10 (ENSVPAG00000000987) #23	KRT28 (ENSVPAG00000000986) #24	KRT27 (ENSVPAG00000000985) #25	KRT26 (ENSVPAG00000000983) #26	KRT25 (ENSVPAG00000000982) #27	ENSVPAG00000000981 #22	KRT222 (ENSVPAG00000000980) #29	SMARCE1 (ENSVPAG00000000979) #30
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486.ab	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160443	ENSGT00940000160295 #9	ENSGT00940000162756	ENSGT00730000111539	ENSGT00390000001157.A.a ##14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000161991	ENSGT00940000162088	ENSGT00940000153980.t	ENSGT00940000163841	ENSGT00940000153980.s	ENSGT00940000159486.ab	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00390000001157.A.a ##14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000161950 #26	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37	ENSGT00940000160144	ENSGT00390000006930	ENSGT00390000018292
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00940000155258.t	ENSGT00940000154403.a.a	ENSGT00940000154403.a.b	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000163841	ENSGT00940000153980.s	ENSGT00940000160295 #9	ENSGT00390000001157.A.a ##14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162088	ENSGT00940000153980.t	ENSGT00940000159382 #22	ENSGT00940000161950 #26	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37	ENSGT00940000160144	ENSGT00390000006930	ENSGT00390000018292
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00390000015789.c.a.b	ENSGT00940000163247	ENSGT00940000160681.C	ENSGT00940000154602.b	ENSGT00940000154602.a	ENSGT00940000155258.t	ENSGT00940000154403.a.a	ENSGT00940000154403.a.b	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000162088	ENSGT00940000153980.t	ENSGT00940000163841	ENSGT00940000153980.s	ENSGT00940000159382 #22	ENSGT00940000161950 #26	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37	ENSGT00940000160144	ENSGT00390000006930	ENSGT00390000018292
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00940000163247	ENSGT00940000154602.b	ENSGT00940000160681.C	ENSGT00940000154602.a	ENSGT00940000155258.t	ENSGT00940000154403.a.a	ENSGT00940000154403.a.b	ENSGT00950000183311	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000162088	ENSGT00940000153980.t	ENSGT00940000163841	ENSGT00940000153980.s	ENSGT00940000159382 #22	ENSGT00940000161950 #26	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37	ENSGT00940000160144	ENSGT00390000006930	ENSGT00390000018292
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00390000014792	ENSGT00390000015789.c.a.b	ENSGT00940000163247	ENSGT00940000154602.b	ENSGT00940000160681.C	ENSGT00940000155258.t	ENSGT00940000154403.a.a	ENSGT00940000154403.a.b	ENSGT00950000183311	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000162088	ENSGT00940000163841	ENSGT00940000153980.s	ENSGT00940000159382 #22	ENSGT00940000161950 #26	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37	ENSGT00940000160144	ENSGT00390000006930	ENSGT00390000018292
Narwhal	MODERN SPECIES	316	GAST (ENSMMNG00015017208)	EIF1 (ENSMMNG00015017110)	ENSMMNG00015017066	ENSMMNG00015017022	KRT16 (ENSMMNG00015016975)	ENSMMNG00015016841	KRT19 (ENSMMNG00015016751)	KRT15 (ENSMMNG00015016652)	KRT13 (ENSMMNG00015016552)	KRT36 (ENSMMNG00015016489)	KRT35 (ENSMMNG00015016167)	KRT32 (ENSMMNG00015016021)	ENSMMNG00015015975	ENSMMNG00015020884	ENSMMNG00015020870	KRT12 (ENSMMNG00015020854) #22	ENSMMNG00015020836 #26	KRT24 (ENSMMNG00015020814) #28	KRT222 (ENSMMNG00015020791) #29	ENSMMNG00015020648 #30	CCR7 (ENSMMNG00015020594) #31	TNS4 (ENSMMNG00015020571) #32	IGFBP4 (ENSMMNG00015020546) #33	TOP2A (ENSMMNG00015020530) #34	GJD3 (ENSMMNG00015020507)	RARA (ENSMMNG00015020465) #35	CDC6 (ENSMMNG00015020434) #36	WIPF2 (ENSMMNG00015020404) #37	RAPGEFL1 (ENSMMNG00015020323)	CASC3 (ENSMMNG00015020273)	MSL1 (ENSMMNG00015020237)
Beluga whale	MODERN SPECIES	26	P3H4 (ENSDLEG00000010296)	JUP (ENSDLEG00000010325)	HAP1 (ENSDLEG00000010394)	GAST (ENSDLEG00000010409)	EIF1 (ENSDLEG00000010424)	ENSDLEG00000010442	KRT36 (ENSDLEG00000010471)	ENSDLEG00000010541	ENSDLEG00000010559	KRT15 (ENSDLEG00000010588)	ENSDLEG00000010656	KRT35 (ENSDLEG00000010700)	KRT32 (ENSDLEG00000011003)	ENSDLEG00000011512	KRT33A (ENSDLEG00000011528)	KRT12 (ENSDLEG00000011548) #22	KRT24 (ENSDLEG00000011564) #28	KRT222 (ENSDLEG00000011592) #29	SMARCE1 (ENSDLEG00000011604) #30	CCR7 (ENSDLEG00000011618) #31	TNS4 (ENSDLEG00000011633) #32	IGFBP4 (ENSDLEG00000011662) #33	TOP2A (ENSDLEG00000011757) #34	GJD3 (ENSDLEG00000013297)	RARA (ENSDLEG00000013307) #35	CDC6 (ENSDLEG00000013333) #36	WIPF2 (ENSDLEG00000013388) #37	RAPGEFL1 (ENSDLEG00000013410)	CASC3 (ENSDLEG00000013448)	MSL1 (ENSDLEG00000013463)	NR1D1 (ENSDLEG00000013483)
Vaquita	MODERN SPECIES	12	HAP1 (ENSPSNG00000013642)	GAST (ENSPSNG00000013554)	ENSPSNG00000013484	ENSPSNG00000013387	KRT17 (ENSPSNG00000013207)	ENSPSNG00000013136	KRT14 (ENSPSNG00000013111)	KRT19 (ENSPSNG00000013067)	KRT15 (ENSPSNG00000012869)	KRT13 (ENSPSNG00000012628)	KRT36 (ENSPSNG00000012532)	KRT35 (ENSPSNG00000012426)	ENSPSNG00000012074	ENSPSNG00000011974	ENSPSNG00000011948	KRT12 (ENSPSNG00000011850) #22	KRT222 (ENSPSNG00000011342) #29	ENSPSNG00000011023 #30	CCR7 (ENSPSNG00000010907) #31	TNS4 (ENSPSNG00000010768) #32	IGFBP4 (ENSPSNG00000010715) #33	TOP2A (ENSPSNG00000010629) #34	RARA (ENSPSNG00000010408) #35	CDC6 (ENSPSNG00000010325) #36	RAPGEFL1 (ENSPSNG00000009921)	CASC3 (ENSPSNG00000009773)	MSL1 (ENSPSNG00000009592)	NR1D1 (ENSPSNG00000009539)	THRA (ENSPSNG00000009491)	MED24 (ENSPSNG00000009228)	CSF3 (ENSPSNG00000008991)
Dolphin	MODERN SPECIES	4094																KRT12 (ENSTTRG00000003254) #22
Sperm whale	MODERN SPECIES	5	ENSPCTG00005013413	ENSPCTG00005013296	KRT14 (ENSPCTG00005013034)	KRT19 (ENSPCTG00005012929)	KRT15 (ENSPCTG00005012795)	KRT13 (ENSPCTG00005012719)	KRT36 (ENSPCTG00005012640)	KRT32 (ENSPCTG00005012144)	ENSPCTG00005011986	ENSPCTG00005011593	ENSPCTG00005011457 #9	ENSPCTG00005011439 ##14	ENSPCTG00005011402 #15	ENSPCTG00005011382 #16	KRT40 (ENSPCTG00005011311) #18	KRT12 (ENSPCTG00005011232) #22	ENSPCTG00005011172 #28	KRT222 (ENSPCTG00005011101) #29	SMARCE1 (ENSPCTG00005010790) #30	CCR7 (ENSPCTG00005010723) #31	TNS4 (ENSPCTG00005010657) #32	TOP2A (ENSPCTG00005010563) #34	WIPF2 (ENSPCTG00005010469) #37	MSL1 (ENSPCTG00005010403)	CASC3 (ENSPCTG00005010303)	PSMD3 (ENSPCTG00005010192)	LRRC3C (ENSPCTG00005010173)	ORMDL3 (ENSPCTG00005010109)	ZPBP2 (ENSPCTG00005010055)	IKZF3 (ENSPCTG00005008014)	GRB7 (ENSPCTG00005007782)
Blue whale	MODERN SPECIES	12	ENSBMSG00010017828	ENSBMSG00010017779	ENSBMSG00010017768 #7	ENSBMSG00010017743 #9	ENSBMSG00010017722 #9	ENSBMSG00010017711 #9	ENSBMSG00010017700 ##14	ENSBMSG00010017678 #15	ENSBMSG00010017663 #16	ENSBMSG00010017650 #16	ENSBMSG00010017624 #18	KRT39 (ENSBMSG00010015952) #19	KRT23 (ENSBMSG00010015818) #20	ENSBMSG00010015791	KRT20 (ENSBMSG00010015759) #21	KRT12 (ENSBMSG00010015720) #22	KRT24 (ENSBMSG00010015682) #28	KRT222 (ENSBMSG00010015655) #29	ENSBMSG00010015441 #30	CCR7 (ENSBMSG00010015376) #31	TNS4 (ENSBMSG00010015347) #32	IGFBP4 (ENSBMSG00010015319) #33	TOP2A (ENSBMSG00010015282) #34	RARA (ENSBMSG00010015127) #35	CDC6 (ENSBMSG00010015096) #36	WIPF2 (ENSBMSG00010015049) #37	RAPGEFL1 (ENSBMSG00010015020)	CASC3 (ENSBMSG00010014953)	MSL1 (ENSBMSG00010014889)	ENSBMSG00010014868	NR1D1 (ENSBMSG00010014854)
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000159486.`b.a.a.a.a	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295.u #9	ENSGT00940000160443	ENSGT00940000160295.v #9	ENSGT00940000162756	ENSGT00730000111539	ENSGT00390000001157.A.a ##14	ENSGT00390000001157.B #15	ENSGT00390000001157.C.jc #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Yarkand deer	MODERN SPECIES	28	ENSCHYG00000006258	ENSCHYG00000006250	ENSCHYG00000006103	ENSCHYG00000006077	ENSCHYG00000006067	ENSCHYG00000006053 #7	ENSCHYG00000006043	ENSCHYG00000006037 #9	ENSCHYG00000006022 ##14	ENSCHYG00000006013 #15	ENSCHYG00000004486 #16	KRT40 (ENSCHYG00000004477) #18	KRT39 (ENSCHYG00000004465) #19	KRT23 (ENSCHYG00000004447) #20	KRT20 (ENSCHYG00000004429) #21	KRT12 (ENSCHYG00000004408) #22	KRT10 (ENSCHYG00000004393) #23	KRT28 (ENSCHYG00000004357) #24	KRT27 (ENSCHYG00000004325) #25	KRT26 (ENSCHYG00000004300) #26	KRT25 (ENSCHYG00000004269) #27	KRT24 (ENSCHYG00000004238) #28	KRT222 (ENSCHYG00000004215) #29	SMARCE1 (ENSCHYG00000004192) #30	CCR7 (ENSCHYG00000004168) #31	TNS4 (ENSCHYG00000004150) #32	IGFBP4 (ENSCHYG00000004135) #33	TOP2A (ENSCHYG00000004090) #34	RARA (ENSCHYG00000003992) #35	CDC6 (ENSCHYG00000003946) #36	WIPF2 (ENSCHYG00000003920) #37
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000155258.t	ENSGT00940000154403.a.a	ENSGT00940000154403.a.b	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000162088.h	ENSGT00940000162088.g	ENSGT00940000153980.q	ENSGT00390000001157.B #15	ENSGT00390000001157.C.jc #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Siberian musk deer	MODERN SPECIES	1210	ENSMMSG00000013897	ENSMMSG00000013853	ENSMMSG00000023929	ENSMMSG00000023925 #7	ENSMMSG00000023922 #7	ENSMMSG00000023920 #9	ENSMMSG00000023916 #9	ENSMMSG00000023913	ENSMMSG00000023911 #9	ENSMMSG00000023909 ##14	ENSMMSG00000023903 #15	KRT40 (ENSMMSG00000023897) #18	KRT39 (ENSMMSG00000023878) #19	KRT23 (ENSMMSG00000023863) #20	KRT20 (ENSMMSG00000023852) #21	KRT12 (ENSMMSG00000023847) #22	KRT10 (ENSMMSG00000023842) #23	KRT28 (ENSMMSG00000023835) #24	KRT27 (ENSMMSG00000023828) #25	KRT26 (ENSMMSG00000023818) #26	KRT25 (ENSMMSG00000023811) #27	KRT24 (ENSMMSG00000023804) #28	KRT222 (ENSMMSG00000023799) #29	ENSMMSG00000023764 #30	CCR7 (ENSMMSG00000023753) #31	TNS4 (ENSMMSG00000023734) #32	IGFBP4 (ENSMMSG00000023725) #33	TOP2A (ENSMMSG00000023680) #34	RARA (ENSMMSG00000023636) #35	CDC6 (ENSMMSG00000023611) #36	WIPF2 (ENSMMSG00000023597) #37
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000154403.a.b	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000162088.h	ENSGT00940000162088.g	ENSGT00940000153980.q.b	ENSGT00940000163426	ENSGT00940000153980.q.a	ENSGT00390000001157.B #15	ENSGT00390000001157.C.jc #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000154268.e.b.a	ENSGT01090000260005.a.b.a.a
Bovinae	ANCESTRAL SPECIES		ENSGT00940000159486.`b.a.a.b.b	ENSGT00940000155433	ENSGT00940000162736.i #7	ENSGT00940000160443.c.b	ENSGT00940000160443.c.a	ENSGT00940000160295.u #9	ENSGT00940000160443.d	ENSGT00940000160295.v #9	ENSGT00390000001157.B #15	ENSGT00390000001157.C.jc #16	ENSGT00940000161968 #18	ENSGT01050000244940.a.a.bb.a	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000154268.e.b.a	ENSGT01090000260005.a.b.a.a
Bos	ANCESTRAL SPECIES	1	ENSGT00940000159486.`b.a.a.b.b.c.a.b	ENSGT00940000155433	ENSGT00940000160295.u #9	ENSGT00940000162736.i #7	ENSGT00940000160443.c.b	ENSGT00940000160443.c.a	ENSGT00940000160443.d	ENSGT00940000160295.v #9	ENSGT00390000001157.C.jc.j #16	ENSGT00390000001157.C.jc.i.a #16	ENSGT00940000161968 #18	ENSGT01050000244940.a.a.bb.a	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000154268.e.b.a	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Bos_a	ANCESTRAL SPECIES		ENSGT00940000159486.`b.a.a.b.b.c.b	ENSGT00940000159486.`b.a.a.b.b.d	ENSGT00940000162736.i.b #7	ENSGT00940000160443.c.b	ENSGT00940000160443.c.a	ENSGT00940000160443.d	ENSGT00940000160295.v #9	ENSGT00390000001157.B #15	ENSGT00390000001157.C.jc.i.b #16	ENSGT00390000001157.C.jc.i.a #16	ENSGT00940000161968 #18	ENSGT01050000244940.a.a.bb.a	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000154268.e.b.a	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Domestic yak	MODERN SPECIES	10	ENSBGRG00000014915 #7	ENSBGRG00000014928	ENSBGRG00000015034 #7	ENSBGRG00000015061	ENSBGRG00000015074	ENSBGRG00000015111	ENSBGRG00000015136 #9	KAP3-1 (ENSBGRG00000015154) ##14	ENSBGRG00000015181 #15	ENSBGRG00000015228 #16	KAP3.3 (ENSBGRG00000015266) #16	KRT40 (ENSBGRG00000015292) #18	KRT39 (ENSBGRG00000015379) #19	KRT23 (ENSBGRG00000015492) #20	KRT20 (ENSBGRG00000016100) #21	KRT12 (ENSBGRG00000016211) #22	KRT10 (ENSBGRG00000016347) #23	KRT28 (ENSBGRG00000016455) #24	KRT27 (ENSBGRG00000016581) #25	KRT26 (ENSBGRG00000016662) #26	KRT25 (ENSBGRG00000016734) #27	KRT24 (ENSBGRG00000016783) #28	KRT222 (ENSBGRG00000016889) #29	SMARCE1 (ENSBGRG00000016928) #30	CCR7 (ENSBGRG00000017039) #31	TNS4 (ENSBGRG00000017101) #32	IGFBP4 (ENSBGRG00000017437) #33	TOP2A (ENSBGRG00000017633) #34	ENSBGRG00000019354	ENSBGRG00000019366	RARA (ENSBGRG00000019399) #35
Wild yak	MODERN SPECIES	1109	ENSBMUG00000007308	ENSBMUG00000007315 #7	ENSBMUG00000007321 #7	ENSBMUG00000007333	ENSBMUG00000007360 #9	ENSBMUG00000007379 #9	ENSBMUG00000007389 ##14	ENSBMUG00000007393 #15	ENSBMUG00000007396 #16	ENSBMUG00000007403 #16	KRT40 (ENSBMUG00000007416) #18	ENSBMUG00000007422	KRT39 (ENSBMUG00000007430) #19	KRT23 (ENSBMUG00000007436) #20	KRT20 (ENSBMUG00000007456) #21	KRT12 (ENSBMUG00000007467) #22	KRT10 (ENSBMUG00000007473) #23	KRT28 (ENSBMUG00000007482) #24	KRT27 (ENSBMUG00000007494) #25	KRT26 (ENSBMUG00000007503) #26	ENSBMUG00000007508
Bos_b	ANCESTRAL SPECIES	15	ENSGT00940000159486.`b.a.a.b.b.c.a.a.b.a	ENSGT00940000155433.i.b	ENSGT00940000155433.i.a	ENSGT00940000162736.i #7	ENSGT00940000160443.c.b	ENSGT00940000160443.c.a	ENSGT00940000160443.d	ENSGT00940000160295.v #9	ENSGT00390000001157.C.jc.j #16	ENSGT00390000001157.B #15	ENSGT00390000001157.C.jc.i.a #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000154268.e.b.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Cow	MODERN SPECIES	10	ENSBTAG00000039644	ENSBTAG00000037665	ENSBTAG00000038759	ENSBTAG00000049202	KRTAP1-1 (ENSBTAG00000030559)	ENSBTAG00000024995	ENSBTAG00000050460 #9	KRTAP3-1 (ENSBTAG00000052919) ##14	ENSBTAG00000054542 #15	ENSBTAG00000054092 #16	KRTAP3-3 (ENSBTAG00000054927) #16	KRT40 (ENSBTAG00000017408) #18	KRT39 (ENSBTAG00000020078) #19	KRT23 (ENSBTAG00000040460) #20	KRT20 (ENSBTAG00000007794) #21	KRT12 (ENSBTAG00000015518) #22	KRT10 (ENSBTAG00000020824) #23	KRT28 (ENSBTAG00000030555) #24	KRT27 (ENSBTAG00000030548) #25	KRT26 (ENSBTAG00000030546) #26	KRT25 (ENSBTAG00000030542) #27	KRT24 (ENSBTAG00000040279) #28	KRT222 (ENSBTAG00000030539) #29	SMARCE1 (ENSBTAG00000015308) #30	CCR7 (ENSBTAG00000015133) #31	TNS4 (ENSBTAG00000007958) #32	IGFBP4 (ENSBTAG00000008611) #33	TOP2A (ENSBTAG00000019262) #34	ENSBTAG00000052844	RARA (ENSBTAG00000012500) #35	CDC6 (ENSBTAG00000010384) #36
Hybrid Bos Indicus	MODERN SPECIES	10	ENSBIXG00005031344	ENSBIXG00005031342	ENSBIXG00005031341 #7	ENSBIXG00005031339	ENSBIXG00005031336	ENSBIXG00005031334	ENSBIXG00005031333 #9	ENSBIXG00005031332	ENSBIXG00005031331	ENSBIXG00005031330 #9	ENSBIXG00005031329 #16	KRT40 (ENSBIXG00005031328) #18	KRT39 (ENSBIXG00005031324) #19	KRT23 (ENSBIXG00005031323) #20	KRT20 (ENSBIXG00005031321) #21	KRT12 (ENSBIXG00005031316) #22	KRT26 (ENSBIXG00005031310) #26	KRT28 (ENSBIXG00005031306) #24	KRT24 (ENSBIXG00005031302) #28	KRT222 (ENSBIXG00005031299) #29	SMARCE1 (ENSBIXG00005031296) #30	CCR7 (ENSBIXG00005031295) #31	TNS4 (ENSBIXG00005031291) #32	IGFBP4 (ENSBIXG00005031288) #33	TOP2A (ENSBIXG00005031281) #34	ENSBIXG00005031277	RARA (ENSBIXG00005031268) #35	CDC6 (ENSBIXG00005031258) #36	WIPF2 (ENSBIXG00005031247) #37	RAPGEFL1 (ENSBIXG00005031234)	CASC3 (ENSBIXG00005031226)
American bison	MODERN SPECIES	3101	ENSBBBG00000010127	ENSBBBG00000010122	ENSBBBG00000010119 #7	ENSBBBG00000010115	ENSBBBG00000010112	ENSBBBG00000006688 #9	ENSBBBG00000025245 ##14	ENSBBBG00000025241 #15	ENSBBBG00000008086 #16	ENSBBBG00000025235 #16	KRT40 (ENSBBBG00000025230) #18	ENSBBBG00000025197	KRT39 (ENSBBBG00000006669) #19	KRT23 (ENSBBBG00000025161) #20	KRT20 (ENSBBBG00000025144) #21	KRT12 (ENSBBBG00000025119) #22	KRT10 (ENSBBBG00000006646) #23	KRT28 (ENSBBBG00000007843) #24	KRT27 (ENSBBBG00000025042) #25	KRT26 (ENSBBBG00000006612) #26	KRT25 (ENSBBBG00000025011) #27	KRT24 (ENSBBBG00000024991) #28	KRT222 (ENSBBBG00000024971) #29	ENSBBBG00000007827	SMARCE1 (ENSBBBG00000024947) #30	CCR7 (ENSBBBG00000024903) #31	TNS4 (ENSBBBG00000024883) #32	IGFBP4 (ENSBBBG00000024848) #33	TOP2A (ENSBBBG00000024833) #34	ENSBBBG00000007723	RARA (ENSBBBG00000024732) #35
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000163416.p.a.b	ENSGT00940000159486.`b.a.a.b.b.a	ENSGT00940000159486.`b.a.a.b.b.b	ENSGT00940000162736.l #7	ENSGT00940000162736.k #7	ENSGT00940000160295.u #9	ENSGT00940000160443	ENSGT00940000160295.v #9	ENSGT00390000001157.A.a ##14	ENSGT00390000001157.B #15	ENSGT00390000001157.C.jc #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000154268.e.b.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Rambouillet Sheep	MODERN SPECIES	2	ENSOARG00020006213 #7	ENSOARG00020006222 #7	ENSOARG00020006235 #7	ENSOARG00020006246 #7	KRTAP1-1 (ENSOARG00020006263) #9	KRTAP1-3 (ENSOARG00020006325) #9	KAP3.2 (ENSOARG00020006425) ##14	ENSOARG00020006438 #15	ENSOARG00020006457 #16	BIIIB4 (ENSOARG00020006476) #16	KRT40 (ENSOARG00020006496) #18	ENSOARG00020006570	KRT39 (ENSOARG00020006647) #19	KRT23 (ENSOARG00020006727) #20	KRT20 (ENSOARG00020006793) #21	KRT12 (ENSOARG00020006858) #22	KRT10 (ENSOARG00020006954) #23	KRT28 (ENSOARG00020007049) #24	KRT27 (ENSOARG00020007155) #25	KRT26 (ENSOARG00020007244) #26	KRT25 (ENSOARG00020007286) #27	KRT24 (ENSOARG00020007351) #28	KRT222 (ENSOARG00020007428) #29	SMARCE1 (ENSOARG00020007516) #30	CCR7 (ENSOARG00020007720) #31	TNS4 (ENSOARG00020007745) #32	IGFBP4 (ENSOARG00020007791) #33	TOP2A (ENSOARG00020007860) #34	RARA (ENSOARG00020008581) #35	CDC6 (ENSOARG00020008853) #36	WIPF2 (ENSOARG00020008893) #37
Goat	MODERN SPECIES	10	ENSCHIG00000008757 #7	ENSCHIG00000006463 #7	ENSCHIG00000007577 #7	ENSCHIG00000026924 #9	ENSCHIG00000014439	ENSCHIG00000023678 #9	ENSCHIG00000016488	ENSCHIG00000022685 #9	KRTAP3-1 (ENSCHIG00000001659) ##14	ENSCHIG00000024894 #16	ENSCHIG00000004564 #16	KRT40 (ENSCHIG00000024829) #18	KRT39 (ENSCHIG00000017306) #19	KRT23 (ENSCHIG00000013100) #20	KRT20 (ENSCHIG00000013291) #21	KRT12 (ENSCHIG00000018097) #22	KRT10 (ENSCHIG00000025099) #23	KRT28 (ENSCHIG00000015839) #24	KRT27 (ENSCHIG00000024470) #25	KRT26 (ENSCHIG00000011943) #26	KRT25 (ENSCHIG00000015383) #27	KRT24 (ENSCHIG00000012661) #28	KRT222 (ENSCHIG00000023613) #29	SMARCE1 (ENSCHIG00000012322) #30	CCR7 (ENSCHIG00000019145) #31	TNS4 (ENSCHIG00000026674) #32	IGFBP4 (ENSCHIG00000014813) #33	TOP2A (ENSCHIG00000012498) #34	ENSCHIG00000003132	RARA (ENSCHIG00000014719) #35	CDC6 (ENSCHIG00000009302) #36
Suina	ANCESTRAL SPECIES		ENSGT00940000153980.p	ENSGT00940000163841	ENSGT00940000153980.o	ENSGT00950000183407	ENSGT00940000163658	ENSGT00940000159486.`b.a.a.a	ENSGT00940000160443.b	ENSGT00940000160443.a	ENSGT00940000160295 #9	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
Chacoan peccary	MODERN SPECIES	941	ENSCWAG00000017481	ENSCWAG00000017369	ENSCWAG00000017284	ENSCWAG00000017197	ENSCWAG00000017174	ENSCWAG00000017141	ENSCWAG00000017125 #9	ENSCWAG00000017118 ##14	ENSCWAG00000017103 #15	ENSCWAG00000017087 #16	ENSCWAG00000017078 #16	KRT40 (ENSCWAG00000017037) #18	KRT39 (ENSCWAG00000016982) #19	KRT23 (ENSCWAG00000016931) #20	KRT20 (ENSCWAG00000016869) #21	KRT12 (ENSCWAG00000016808) #22	KRT10 (ENSCWAG00000016732) #23	KRT28 (ENSCWAG00000016640) #24	KRT27 (ENSCWAG00000016581) #25	KRT26 (ENSCWAG00000016511) #26	KRT25 (ENSCWAG00000016404) #27	KRT222 (ENSCWAG00000016341) #29	SMARCE1 (ENSCWAG00000016110) #30	ENSCWAG00000016083	CCR7 (ENSCWAG00000016050) #31	TNS4 (ENSCWAG00000015968) #32	IGFBP4 (ENSCWAG00000015936) #33	TOP2A (ENSCWAG00000015757) #34	RARA (ENSCWAG00000015541) #35
Pig	MODERN SPECIES	3	ENSSSCG00000033085	ENSSSCG00000032172	ENSSSCG00000039030	ENSSSCG00000025789	ENSSSCG00000017451 #9	ENSSSCG00000027632 #9	ENSSSCG00000038114	ENSSSCG00000049072 #9	ENSSSCG00000055895 #15	ENSSSCG00000039927 #16	ENSSSCG00000054562 #16	KRT40 (ENSSSCG00000036987) #18	KRT39 (ENSSSCG00000017458) #19	KRT23 (ENSSSCG00000024067) #20	KRT20 (ENSSSCG00000017459) #21	KRT12 (ENSSSCG00000017460) #22	ENSSSCG00000058554	KRT10 (ENSSSCG00000028522) #23	KRT28 (ENSSSCG00000017461) #24	KRT27 (ENSSSCG00000017462) #25	KRT26 (ENSSSCG00000017463) #26	KRT25 (ENSSSCG00000017464) #27	KRT24 (ENSSSCG00000017465) #28	KRT222 (ENSSSCG00000036089) #29	SMARCE1 (ENSSSCG00000039137) #30	CCR7 (ENSSSCG00000017466) #31	TNS4 (ENSSSCG00000017470) #32	IGFBP4 (ENSSSCG00000017472) #33	TOP2A (ENSSSCG00000017473) #34	RARA (ENSSSCG00000017475) #35	CDC6 (ENSSSCG00000017471) #36
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000159486	ENSGT00940000154448.b.b.b.b	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000153980.x	ENSGT00940000163931	ENSGT00940000159486.hb	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000161991	ENSGT00940000163444	ENSGT00940000162088	ENSGT00940000153980.x	ENSGT00940000159486.gb.b	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Caniformia_b	ANCESTRAL SPECIES	21				ENSGT00940000159486.gb.b	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
Ursidae	ANCESTRAL SPECIES	18							ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077.b #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
Ursus	ANCESTRAL SPECIES	87						ENSGT00940000163931	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C.xc #16	ENSGT00390000001157.C.yc #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077.b #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
Polar bear	MODERN SPECIES	95			ENSUMAG00000018199	ENSUMAG00000018195	ENSUMAG00000018188	ENSUMAG00000018183	ENSUMAG00000018180	ENSUMAG00000018176 #9	KRTAP3-1 (ENSUMAG00000018174) #14	ENSUMAG00000018170 #16	ENSUMAG00000018167 #16	KRT40 (ENSUMAG00000018152) #18	KRT39 (ENSUMAG00000018147) #19	KRT23 (ENSUMAG00000018142) #20	KRT20 (ENSUMAG00000018137) #21	KRT12 (ENSUMAG00000018128) #22	KRT10 (ENSUMAG00000018108) #23	KRT28 (ENSUMAG00000018099) #24	KRT27 (ENSUMAG00000018095) #25	KRT26 (ENSUMAG00000018091) #26	KRT25 (ENSUMAG00000018076) #27	KRT24 (ENSUMAG00000018046) #28	KRT222 (ENSUMAG00000018026) #29	SMARCE1 (ENSUMAG00000018005) #30	CCR7 (ENSUMAG00000017996) #31	TNS4 (ENSUMAG00000017925) #32	IGFBP4 (ENSUMAG00000017899) #33	TOP2A (ENSUMAG00000017880) #34	RARA (ENSUMAG00000017839) #35	CDC6 (ENSUMAG00000017816) #36	WIPF2 (ENSUMAG00000017809) #37
American black bear	MODERN SPECIES	6791															KRT20 (ENSUAMG00000027918) #21	KRT12 (ENSUAMG00000027917) #22
Giant Panda	MODERN SPECIES	4	ENSAMEG00000023481	KRT9 (ENSAMEG00000027196)	KRT16 (ENSAMEG00000005579)	ENSAMEG00000028827	ENSAMEG00000025134 #7	ENSAMEG00000027447	ENSAMEG00000027894 #9	ENSAMEG00000028834 #9	ENSAMEG00000008411 #9	ENSAMEG00000019943 #14	ENSAMEG00000026945 #16	KRT40 (ENSAMEG00000008365) #18	KRT39 (ENSAMEG00000008358) #19	KRT23 (ENSAMEG00000008337) #20	KRT20 (ENSAMEG00000008325) #21	KRT12 (ENSAMEG00000008309) #22	KRT28 (ENSAMEG00000008303) #24	KRT26 (ENSAMEG00000008292) #26	KRT25 (ENSAMEG00000008170) #27	ENSAMEG00000028027 #23	KRT222 (ENSAMEG00000008167) #29	SMARCE1 (ENSAMEG00000008123) #30	CCR7 (ENSAMEG00000008120) #31	TNS4 (ENSAMEG00000008109) #32	IGFBP4 (ENSAMEG00000025172) #33	TOP2A (ENSAMEG00000007989) #34	RARA (ENSAMEG00000007921) #35	CDC6 (ENSAMEG00000007868) #36	WIPF2 (ENSAMEG00000007849) #37	RAPGEFL1 (ENSAMEG00000007814)	CASC3 (ENSAMEG00000007764)
Mustelinae	ANCESTRAL SPECIES	2						ENSGT00940000159486.gb.b	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.q #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
American mink	MODERN SPECIES	92					ENSNVIG00000001556	ENSNVIG00000001581	ENSNVIG00000001599 #7	KRTAP3-1 (ENSNVIG00000001605) #14	ENSNVIG00000001610 #15	ENSNVIG00000001613 #16	ENSNVIG00000001625 #16	KRT40 (ENSNVIG00000001640) #18	KRT39 (ENSNVIG00000001654) #19	K1C23 (ENSNVIG00000001671) #20	KRT20 (ENSNVIG00000001695) #21	KRT12 (ENSNVIG00000001720) #22	KRT10 (ENSNVIG00000001746) #23	KRT28 (ENSNVIG00000001803) #24	KRT27 (ENSNVIG00000001814) #25	KRT26 (ENSNVIG00000001823) #26	KRT25 (ENSNVIG00000001842) #27	KRT24 (ENSNVIG00000001847) #28	KT222 (ENSNVIG00000001863) #29	ENSNVIG00000001888 #30	CCR7 (ENSNVIG00000002253) #31	TNS4 (ENSNVIG00000002271) #32	IGFBP4 (ENSNVIG00000002312) #33	TOP2A (ENSNVIG00000002325) #34	RARA (ENSNVIG00000002409) #35	CDC6 (ENSNVIG00000002533) #36	WIPF2 (ENSNVIG00000002634) #37
Ferret	MODERN SPECIES	270								ENSMPUG00000014568	ENSMPUG00000014572	ENSMPUG00000014574	KRTAP3-1 (ENSMPUG00000020082) #14	ENSMPUG00000020083 #16	KRT40 (ENSMPUG00000014577) #18	KRT23 (ENSMPUG00000014621) #20	KRT20 (ENSMPUG00000014622) #21	KRT12 (ENSMPUG00000014625) #22	KRT10 (ENSMPUG00000014636) #23	KRT28 (ENSMPUG00000014640) #24	KRT26 (ENSMPUG00000014642) #26	KRT25 (ENSMPUG00000014651) #27	KRT24 (ENSMPUG00000014653) #28	KRT222 (ENSMPUG00000014654) #29	ENSMPUG00000014660 #30	CCR7 (ENSMPUG00000014673) #31	TNS4 (ENSMPUG00000014676) #32	IGFBP4 (ENSMPUG00000014678) #33	TOP2A (ENSMPUG00000014680) #34	RARA (ENSMPUG00000014863) #35	ENSMPUG00000014883	CDC6 (ENSMPUG00000014897) #36	WIPF2 (ENSMPUG00000014898) #37
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000163416	ENSGT00940000159486.gb.b	ENSGT00940000155433.p	ENSGT00940000162736 #7	ENSGT00940000155433.o	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C.`d #16	ENSGT00390000001157.C.ad #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415.b	ENSGT00390000003628.b.o #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000155433.p.d.a	ENSGT00940000162736 #7	ENSGT00940000155433.o	ENSGT00940000160295.n #9	ENSGT00940000160295.m.a #9	ENSGT00940000160295.m.b.a #9	ENSGT00940000160295.m.b.b #9	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C.`d #16	ENSGT00390000001157.C.ad #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415.b	ENSGT00390000003628.b.o #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Dog	MODERN SPECIES	37	ENSCAFG00845013400 #7	ENSCAFG00845013413	ENSCAFG00845013424 #7	ENSCAFG00845013437 #9	ENSCAFG00845013453 #9	ENSCAFG00845013469 #9	ENSCAFG00845013488 #9	KRTAP3-1 (ENSCAFG00845013500) #14	ENSCAFG00845013514 #15	ENSCAFG00845013535 #16	ENSCAFG00845013549 #16	KRT40 (ENSCAFG00845013567) #18	KRT39 (ENSCAFG00845013600) #19	KRT23 (ENSCAFG00845013633) #20	KRT20 (ENSCAFG00845013676) #21	KRT12 (ENSCAFG00845013703) #22	KRT10 (ENSCAFG00845013739) #23	KRT28 (ENSCAFG00845007176) #24	KRT27 (ENSCAFG00845007233) #25	KRT26 (ENSCAFG00845007297) #26	KRT25 (ENSCAFG00845007356) #27	KRT24 (ENSCAFG00845007445) #28	KRT222 (ENSCAFG00845007545) #29	SMARCE1 (ENSCAFG00845007717) #30	CCR7 (ENSCAFG00845007930) #31	TNS4 (ENSCAFG00845008016) #32	IGFBP4 (ENSCAFG00845008138) #33	TOP2A (ENSCAFG00845008263) #34	TAF12 (ENSCAFG00845008570)	RARA (ENSCAFG00845008607) #35	CDC6 (ENSCAFG00845008754) #36
Dingo	MODERN SPECIES	150	ENSCAFG00020018535	ENSCAFG00020018539	ENSCAFG00020018541	ENSCAFG00020018544 #9	ENSCAFG00020018546 #9	ENSCAFG00020018547 #9	ENSCAFG00020018549 #9	KRTAP3-1 (ENSCAFG00020018551) #14	ENSCAFG00020018552 #15	ENSCAFG00020018554 #16	ENSCAFG00020018555 #16	KRT40 (ENSCAFG00020018558) #18	KRT39 (ENSCAFG00020018562) #19	KRT23 (ENSCAFG00020018572) #20	KRT20 (ENSCAFG00020018575) #21	KRT12 (ENSCAFG00020018578) #22	KRT10 (ENSCAFG00020018583) #23	KRT28 (ENSCAFG00020018588) #24	KRT27 (ENSCAFG00020018596) #25	KRT26 (ENSCAFG00020018606) #26	KRT25 (ENSCAFG00020018610) #27	KRT24 (ENSCAFG00020018616) #28	KRT222 (ENSCAFG00020018618) #29	ENSCAFG00020018619	SMARCE1 (ENSCAFG00020018621) #30	CCR7 (ENSCAFG00020018629) #31	TNS4 (ENSCAFG00020018638) #32	TOP2A (ENSCAFG00020018681) #34	ENSCAFG00020018725	RARA (ENSCAFG00020018727) #35	CDC6 (ENSCAFG00020018729) #36
Red fox	MODERN SPECIES	20	ENSVVUG00000024278	ENSVVUG00000024280	ENSVVUG00000024281	ENSVVUG00000024282 #9	ENSVVUG00000024284	ENSVVUG00000024286	ENSVVUG00000024287	KRTAP3-1 (ENSVVUG00000024289) #14	ENSVVUG00000024291 #15	ENSVVUG00000024294 #16	ENSVVUG00000024296 #16	KRT40 (ENSVVUG00000024301) #18	KRT39 (ENSVVUG00000024305) #19	KRT23 (ENSVVUG00000024308) #20	KRT20 (ENSVVUG00000024310) #21	KRT12 (ENSVVUG00000024314) #22	KRT10 (ENSVVUG00000024318) #23	KRT28 (ENSVVUG00000024322) #24	KRT27 (ENSVVUG00000024325) #25	KRT26 (ENSVVUG00000024328) #26	KRT25 (ENSVVUG00000024329) #27	KRT24 (ENSVVUG00000000130) #28	KRT222 (ENSVVUG00000000398) #29	ENSVVUG00000000422 #30	CCR7 (ENSVVUG00000000457) #31	TNS4 (ENSVVUG00000000491) #32	IGFBP4 (ENSVVUG00000000835) #33	TOP2A (ENSVVUG00000000844) #34	ENSVVUG00000000854	RARA (ENSVVUG00000000865) #35	CDC6 (ENSVVUG00000000907) #36
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000163658	ENSGT00940000163416	ENSGT00940000163931	ENSGT00940000159486.hb	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295.o #9	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Panthera	ANCESTRAL SPECIES	14	ENSGT00940000164350.B	ENSGT00940000159486.hb	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295.o #9	ENSGT00940000160295.p.b #9	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C.cd.b #16	ENSGT00390000001157.C.cd.a #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
Tiger	MODERN SPECIES	230					ENSPTIG00000012077	ENSPTIG00000011657 #9	ENSPTIG00000005285 #9	KRTAP3-1 (ENSPTIG00000005276) #14	ENSPTIG00000005265 #15	ENSPTIG00000005263 #16	ENSPTIG00000005258 #16	KRT40 (ENSPTIG00000009659) #18	KRT39 (ENSPTIG00000009611) #19	KRT23 (ENSPTIG00000008885) #20	KRT20 (ENSPTIG00000007826) #21	KRT12 (ENSPTIG00000006986) #22	KRT10 (ENSPTIG00000006172) #23	KRT28 (ENSPTIG00000005633) #24	KRT27 (ENSPTIG00000003088) #25	KRT26 (ENSPTIG00000000564) #26	KRT25 (ENSPTIG00000021487) #27	KRT24 (ENSPTIG00000021177) #28	KRT222 (ENSPTIG00000020976) #29	ENSPTIG00000019942 #30	CCR7 (ENSPTIG00000019719) #31	TNS4 (ENSPTIG00000019307) #32	IGFBP4 (ENSPTIG00000018826) #33	TOP2A (ENSPTIG00000017914) #34	RARA (ENSPTIG00000015995) #35	CDC6 (ENSPTIG00000015145) #36	WIPF2 (ENSPTIG00000014120) #37
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00940000153980.w.b	ENSGT00940000153980.w.a.a	ENSGT00940000163841.k	ENSGT00940000153980.w.a.b	ENSGT00940000163658	ENSGT00940000163416	ENSGT00940000160295.p.b #9	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C.cd.b #16	ENSGT00390000001157.C.cd.a #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
leopard	MODERN SPECIES	273	ENSPPRG00000012558 #7	ENSPPRG00000012574	ENSPPRG00000012576 #7	ENSPPRG00000012582	ENSPPRG00000012588 #9	ENSPPRG00000012595 #9	ENSPPRG00000022039 #9	KRTAP3-1 (ENSPPRG00000012597) #14	ENSPPRG00000022062 #15	ENSPPRG00000012599 #16	ENSPPRG00000012602 #16	KRT40 (ENSPPRG00000022324) #18	KRT39 (ENSPPRG00000022347) #19	KRT23 (ENSPPRG00000022378) #20	KRT20 (ENSPPRG00000022399) #21	KRT12 (ENSPPRG00000022420) #22	KRT10 (ENSPPRG00000022440) #23
lion	MODERN SPECIES	14	ENSPLOG00000015759	ENSPLOG00000015677	ENSPLOG00000015602	ENSPLOG00000015516	KRT33A (ENSPLOG00000015451)	KRTAP16-1 (ENSPLOG00000015356)	ENSPLOG00000015324	KRTAP3-1 (ENSPLOG00000015302) #14	ENSPLOG00000015267 #15	ENSPLOG00000015250 #16	ENSPLOG00000015231 #16	KRT40 (ENSPLOG00000015146) #18	KRT39 (ENSPLOG00000015059) #19	KRT23 (ENSPLOG00000014953) #20	KRT20 (ENSPLOG00000014850) #21	KRT12 (ENSPLOG00000014753) #22	KRT10 (ENSPLOG00000014662) #23	KRT28 (ENSPLOG00000014559) #24	KRT27 (ENSPLOG00000014479) #25	KRT26 (ENSPLOG00000014386) #26	KRT25 (ENSPLOG00000014291) #27	KRT24 (ENSPLOG00000014203) #28	KRT222 (ENSPLOG00000014138) #29	SMARCE1 (ENSPLOG00000013227) #30	CCR7 (ENSPLOG00000013103) #31	TNS4 (ENSPLOG00000012955) #32	IGFBP4 (ENSPLOG00000012896) #33	TOP2A (ENSPLOG00000012809) #34	RARA (ENSPLOG00000012621) #35	CDC6 (ENSPLOG00000012533) #36	WIPF2 (ENSPLOG00000012439) #37
Cat	MODERN SPECIES	245	ENSFCAG00000045780	ENSFCAG00000053497	ENSFCAG00000045055	ENSFCAG00000040679 #9	ENSFCAG00000027774 #9	ENSFCAG00000008820 #9	ENSFCAG00000006428 #9	KRTAP3-1 (ENSFCAG00000013310) #14	ENSFCAG00000035429 #15	ENSFCAG00000033927 #16	ENSFCAG00000038642 #16	ENSFCAG00000046553 #18	KRT39 (ENSFCAG00000002023) #19	KRT23 (ENSFCAG00000002022) #20	KRT20 (ENSFCAG00000043236) #21	KRT12 (ENSFCAG00000002020) #22	KRT10 (ENSFCAG00000002019) #23	KRT28 (ENSFCAG00000044800) #24	KRT26 (ENSFCAG00000026580) #26	KRT25 (ENSFCAG00000042427) #27	KRT24 (ENSFCAG00000002015) #28	KRT222 (ENSFCAG00000018462) #29	SMARCE1 (ENSFCAG00000009646) #30	ENSFCAG00000036122	CCR7 (ENSFCAG00000033714) #31	TNS4 (ENSFCAG00000009644) #32	IGFBP4 (ENSFCAG00000045422) #33	TOP2A (ENSFCAG00000009642) #34	GJD3 (ENSFCAG00000041256)	RARA (ENSFCAG00000028515) #35	CDC6 (ENSFCAG00000030659) #36
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000159486	ENSGT00940000154448.b.b.b.b	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000160443	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Equus	ANCESTRAL SPECIES		ENSGT00940000159486.fb	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486.eb.b	ENSGT00940000159486.eb.a.b	ENSGT00940000159486.eb.a.a	ENSGT00940000155433.q.a	ENSGT00940000160443.j	ENSGT00940000160443.i	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Horse	MODERN SPECIES	2	ENSECAG00000052248	ENSECAG00000028394	ENSECAG00000036742	ENSECAG00000050413	ENSECAG00000050669	ENSECAG00000055451	ENSECAG00000033315	ENSECAG00000051092	ENSECAG00000047844	ENSECAG00000059966	ENSECAG00000052559	ENSECAG00000045648	KRT40 (ENSECAG00000056584) #18	KRT23 (ENSECAG00000014812) #20	KRT20 (ENSECAG00000026977) #21	KRT12 (ENSECAG00000018999) #22	KRT10A (ENSECAG00000020036) #23	ENSECAG00000024656 #23	KRT28 (ENSECAG00000009734) #24	KRT25 (ENSECAG00000013748) #27	KRT26 (ENSECAG00000012819) #26	KRT24 (ENSECAG00000016177) #28	KRT222 (ENSECAG00000026968) #29	SMARCE1 (ENSECAG00000022534) #30	CCR7 (ENSECAG00000004945) #31	TNS4 (ENSECAG00000007918) #32	IGFBP4 (ENSECAG00000011271) #33	TOP2A (ENSECAG00000013053) #34	GJD3 (ENSECAG00000041545)	RARA (ENSECAG00000023358) #35	CDC6 (ENSECAG00000009913) #36
Donkey	MODERN SPECIES	4	ENSEASG00005026893	ENSEASG00005035834	ENSEASG00005033437	ENSEASG00005036720	ENSEASG00005038813	ENSEASG00005003740	ENSEASG00005024433	KRTAP3-1 (ENSEASG00005032224) #14	ENSEASG00005003734 #15	ENSEASG00005038141 #16	ENSEASG00005028083 #16	KRT40 (ENSEASG00005003721) #18	KRT39 (ENSEASG00005003716) #19	KRT23 (ENSEASG00005003713) #20	KRT20 (ENSEASG00005003710) #21	KRT12 (ENSEASG00005003707) #22	KRT10 (ENSEASG00005003703) #23	KRT27 (ENSEASG00005035050) #25	KRT26 (ENSEASG00005003695) #26	KRT25 (ENSEASG00005003693) #27	KRT24 (ENSEASG00005003685) #28	KRT222 (ENSEASG00005003681) #29	SMARCE1 (ENSEASG00005003680) #30	CCR7 (ENSEASG00005003679) #31	TNS4 (ENSEASG00005003677) #32	IGFBP4 (ENSEASG00005003675) #33	TOP2A (ENSEASG00005003198) #34	GJD3 (ENSEASG00005031621)	RARA (ENSEASG00005003055) #35	CDC6 (ENSEASG00005003036) #36	ENSEASG00005004849
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000162088	ENSGT00940000153980	ENSGT00940000163426	ENSGT00940000163841	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Megabat	MODERN SPECIES	2609														KRT23 (ENSPVAG00000011372) #20	KRT20 (ENSPVAG00000011371) #21	KRT12 (ENSPVAG00000011370) #22	KRT10 (ENSPVAG00000011368) #23	KRT28 (ENSPVAG00000011367) #24	KRT27 (ENSPVAG00000011365) #25	KRT26 (ENSPVAG00000011363) #26	KRT25 (ENSPVAG00000011361) #27	KRT24 (ENSPVAG00000011359) #28	KRT222 (ENSPVAG00000011357) #29	SMARCE1 (ENSPVAG00000011355) #30
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000161991	ENSGT00940000163841	ENSGT00940000153980	ENSGT00940000163426	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Microbat	MODERN SPECIES	1083	ENSMLUG00000015140	ENSMLUG00000015139	ENSMLUG00000014892	ENSMLUG00000014134	ENSMLUG00000010189	ENSMLUG00000007823	ENSMLUG00000007830	ENSMLUG00000007847 #9	KRTAP3-1 (ENSMLUG00000001160) #14	ENSMLUG00000001163 #16	ENSMLUG00000017264 #16	KRT40 (ENSMLUG00000017258) #18	KRT39 (ENSMLUG00000003103) #19	KRT23 (ENSMLUG00000003098) #20	KRT20 (ENSMLUG00000003085) #21	KRT12 (ENSMLUG00000003072) #22	KRT10 (ENSMLUG00000006133) #23	KRT25 (ENSMLUG00000004617) #27	ENSMLUG00000028688 #28
Eulipotyphla	ANCESTRAL SPECIES	64															ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27
Common shrew	MODERN SPECIES	6120															ENSSARG00000003299 #21	ENSSARG00000003265 #22	ENSSARG00000003234 #23	KRT28 (ENSSARG00000003188) #24	KRT26 (ENSSARG00000003150) #26
Hedgehog	MODERN SPECIES	7866															KRT20 (ENSEEUG00000000048) #21	KRT12 (ENSEEUG00000000041) #22
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000159486	ENSGT00940000163931	ENSGT00940000154448.b.b.b.a.a	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b #30	ENSGT00940000164415	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT01100000265611	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Glires	ANCESTRAL SPECIES	3	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000159486.e.a	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000163931	ENSGT00940000154448.b.b.b.b.e.a	ENSGT00940000159486.e.a	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000159486.f	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Kangaroo rat	MODERN SPECIES	326	ENSDORG00000026358	ENSDORG00000023366	ENSDORG00000008477	ENSDORG00000023721	ENSDORG00000012266	ENSDORG00000024033	ENSDORG00000028606	ENSDORG00000016176 #9	ENSDORG00000025402 #9	ENSDORG00000024187 #16	ENSDORG00000023985 #16	Krt40 (ENSDORG00000016181) #18	Krt39 (ENSDORG00000008898) #19	Krt23 (ENSDORG00000001625) #20	Krt20 (ENSDORG00000001623) #21	ENSDORG00000001618 #22	Krt10 (ENSDORG00000006753) #23	Krt28 (ENSDORG00000006752) #24	Krt27 (ENSDORG00000006751) #25	Krt26 (ENSDORG00000006750) #26	Krt25 (ENSDORG00000006749) #27	Krt24 (ENSDORG00000016005) #28	Krt222 (ENSDORG00000016002) #29	Smarce1 (ENSDORG00000015999) #30	Ccr7 (ENSDORG00000014123) #31	Tns4 (ENSDORG00000016056) #32	Igfbp4 (ENSDORG00000016055) #33	Top2a (ENSDORG00000016054) #34	Rara (ENSDORG00000023922) #35	Cdc6 (ENSDORG00000015184) #36	ENSDORG00000026557 #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000164263	ENSGT00940000153980.j.a.a	ENSGT00940000153980.j.a.b.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000159486.f	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Muroidea	ANCESTRAL SPECIES		ENSGT00940000159486.f.f	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000159486.f.e.a.a.a	ENSGT00940000155433	ENSGT00940000160295.ib.a #9	ENSGT00940000160295.ib.b.b.a.a #9	ENSGT00940000160295.ib.b.a #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000159486.f.f.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295.ib.a #9	ENSGT00940000160295.ib.b.a #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000154403.a.b	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000153980.j.a.b.a.b	ENSGT00940000163426	ENSGT00940000153980.j.a.a	ENSGT00940000160295.ib.a #9	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000153980.j.a.b.a.a.b	ENSGT00940000163658	ENSGT00940000159486.f.e.a.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295.ib.b.b.a.b #9	ENSGT00940000160295.ib.b.b.a.a #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Northern American deer mouse	MODERN SPECIES	21	Gm11555 (ENSPEMG00000028694)	ENSPEMG00000027729	ENSPEMG00000028223	ENSPEMG00000024614	ENSPEMG00000030371	ENSPEMG00000025752	Krtap1-5 (ENSPEMG00000014953)	Krtap3-1 (ENSPEMG00000014982) #14	Gm11939 (ENSPEMG00000025106) #15	ENSPEMG00000027732 #16	ENSPEMG00000030050 #16	Krt40 (ENSPEMG00000011683) #18	Krt39 (ENSPEMG00000013051) #19	Krt23 (ENSPEMG00000010375) #20	Krt20 (ENSPEMG00000008907) #21	Krt12 (ENSPEMG00000012317) #22	Krt10 (ENSPEMG00000016211) #23	Krt28 (ENSPEMG00000017906) #24	Krt27 (ENSPEMG00000002310) #25	Krt26 (ENSPEMG00000012535) #26	Krt25 (ENSPEMG00000016149) #27	Krt24 (ENSPEMG00000017697) #28	Krt222 (ENSPEMG00000011259) #29	Smarce1 (ENSPEMG00000018043) #30	Ccr7 (ENSPEMG00000009706) #31	Tns4 (ENSPEMG00000020329) #32	Igfbp4 (ENSPEMG00000014210) #33	Top2a (ENSPEMG00000016393) #34	Gjd3 (ENSPEMG00000014917)	Rara (ENSPEMG00000010534) #35	Cdc6 (ENSPEMG00000012427) #36
Prairie vole	MODERN SPECIES	114	Gm11563 (ENSMOCG00000017454)	ENSMOCG00000009228	ENSMOCG00000005151	ENSMOCG00000005136	ENSMOCG00000005678	ENSMOCG00000010132 #9	ENSMOCG00000003960 #9	Krtap1-5 (ENSMOCG00000012540)	Krtap3-1 (ENSMOCG00000020675) #14	ENSMOCG00000005111 #16	ENSMOCG00000002845 #16	Krt40 (ENSMOCG00000016435) #18	Krt39 (ENSMOCG00000018914) #19	Krt23 (ENSMOCG00000014828) #20	Krt20 (ENSMOCG00000002735) #21	Krt12 (ENSMOCG00000001503) #22	Krt10 (ENSMOCG00000009134) #23	Krt28 (ENSMOCG00000007496) #24	Krt27 (ENSMOCG00000005020) #25	Krt26 (ENSMOCG00000014953) #26	Krt25 (ENSMOCG00000020569) #27	Krt24 (ENSMOCG00000017266) #28	Krt222 (ENSMOCG00000021148) #29	ENSMOCG00000015059 #30	Ccr7 (ENSMOCG00000004292) #31	Tns4 (ENSMOCG00000022959) #32	Igfbp4 (ENSMOCG00000021157) #33	Top2a (ENSMOCG00000013182) #34	Gjd3 (ENSMOCG00000005264)	Rara (ENSMOCG00000016096) #35	Cdc6 (ENSMOCG00000021152) #36
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000163658	ENSGT00940000164459	ENSGT00840000130699	ENSGT00940000159486.f.f.a.b	ENSGT00940000163416	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295.ib.b.b.a.b #9	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Golden Hamster	MODERN SPECIES	674					ENSMAUG00000021591	ENSMAUG00000014874	ENSMAUG00000016423	ENSMAUG00000010652	Krtap1-3 (ENSMAUG00000013235) #9	Krtap3-1 (ENSMAUG00000010133) #14	ENSMAUG00000010087 #16	Krt40 (ENSMAUG00000019288) #18	Krt39 (ENSMAUG00000011575) #19	Krt23 (ENSMAUG00000015956) #20	Krt20 (ENSMAUG00000012821) #21	Krt12 (ENSMAUG00000021614) #22	Krt10 (ENSMAUG00000022010) #23	Krt28 (ENSMAUG00000016117) #24	Krt27 (ENSMAUG00000010781) #25	Krt26 (ENSMAUG00000009507) #26	Krt25 (ENSMAUG00000016144) #27	Krt24 (ENSMAUG00000000934) #28	Krt222 (ENSMAUG00000009280) #29	Smarce1 (ENSMAUG00000006265) #30	Ccr7 (ENSMAUG00000021249) #31	Tns4 (ENSMAUG00000016240) #32	Igfbp4 (ENSMAUG00000008494) #33	Top2a (ENSMAUG00000010103) #34	Rara (ENSMAUG00000014473) #35	Cdc6 (ENSMAUG00000004369) #36	Wipf2 (ENSMAUG00000002857) #37
Chinese hamster chok1gshd	MODERN SPECIES	33	ENSCGRG00001012466	ENSCGRG00001024559	ENSCGRG00001003344	ENSCGRG00001012468 #9	ENSCGRG00001021738 #9	ENSCGRG00001009734 #9	Krtap9-3 (ENSCGRG00001007897) #9	Krtap3-1 (ENSCGRG00001004619) #14	Gm11939 (ENSCGRG00001005088) #15	ENSCGRG00001006304 #16	ENSCGRG00001012848 #16	Krt40 (ENSCGRG00001000083) #18	Krt39 (ENSCGRG00001019993) #19	Krt23 (ENSCGRG00001000115) #20	Krt20 (ENSCGRG00001022236) #21	Krt12 (ENSCGRG00001000815) #22	Krt10 (ENSCGRG00001006589) #23	Krt28 (ENSCGRG00001010998) #24	Krt27 (ENSCGRG00001020156) #25	Krt26 (ENSCGRG00001023067) #26	Krt25 (ENSCGRG00001019023) #27	Krt24 (ENSCGRG00001016600) #28	Krt222 (ENSCGRG00001001412) #29	Smarce1 (ENSCGRG00001010211) #30	Ccr7 (ENSCGRG00001022917) #31	Tns4 (ENSCGRG00001016573) #32	Igfbp4 (ENSCGRG00001002713) #33	Top2a (ENSCGRG00001020913) #34	Gjd3 (ENSCGRG00001008548)	Rara (ENSCGRG00001021724) #35	CDC6 (ENSCGRG00001023158) #36
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000164263	ENSGT00940000159486.f.f.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295.ib.a #9	ENSGT00940000160295.ib.b.b.b #9	ENSGT00940000160295.ib.b.a #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Mus	ANCESTRAL SPECIES	2	ENSGT00940000159486.f.e.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433.fb.b	ENSGT00940000155433.fb.a	ENSGT00940000160295.ib.a #9	ENSGT00940000160295.ib.b.b.b #9	ENSGT00940000160295.ib.b.a #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000159486.f.e.a.a.a	ENSGT00940000155433.fb.b.a	ENSGT00940000155433.fb.a	ENSGT00940000155433.fb.b.b	ENSGT00940000160295.ib.a #9	ENSGT00940000160295.ib.b.b.b #9	ENSGT00940000160295.ib.b.a #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000163416	ENSGT00840000130699.b	ENSGT00840000130699.a.b	ENSGT00940000155433.fb.b.b	ENSGT00940000160295.ib.a #9	ENSGT00940000160295.ib.b.b.b #9	ENSGT00940000160295.ib.b.a #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Mouse	MODERN SPECIES	2	Krtap2-4 (ENSMUSG00000060756)	Gm11937 (ENSMUSG00000058725)	Gm11938 (ENSMUSG00000057674)	Krtap9-3 (ENSMUSG00000049809) #9	Krtap1-3 (ENSMUSG00000078131) #9	Krtap1-4 (ENSMUSG00000075567) #9	Krtap1-5 (ENSMUSG00000047253)	Krtap3-1 (ENSMUSG00000047564) #14	Gm11939 (ENSMUSG00000078132) #15	Krtap3-2 (ENSMUSG00000069721) #16	Krtap3-3 (ENSMUSG00000069722) #16	Krt40 (ENSMUSG00000059169) #18	Krt39 (ENSMUSG00000064165) #19	Krt23 (ENSMUSG00000006777) #20	Krt20 (ENSMUSG00000035775) #21	Krt12 (ENSMUSG00000020912) #22	Krt10 (ENSMUSG00000019761) #23	Krt28 (ENSMUSG00000055937) #24	Krt27 (ENSMUSG00000017588) #25	Krt26 (ENSMUSG00000075570) #26	Krt25 (ENSMUSG00000035831) #27	Krt24 (ENSMUSG00000020913) #28	Krt222 (ENSMUSG00000035849) #29	Smarce1 (ENSMUSG00000037935) #30	Ccr7 (ENSMUSG00000037944) #31	Tns4 (ENSMUSG00000017607) #32	Igfbp4 (ENSMUSG00000017493) #33	Top2a (ENSMUSG00000020914) #34	Gjd3 (ENSMUSG00000047197)	Rara (ENSMUSG00000037992) #35	Cdc6 (ENSMUSG00000017499) #36
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000159486.f.f.b.a	ENSGT00940000154448.b.b.a.b.b.a	ENSGT00940000154448.b.b.a.a.b	ENSGT00940000155433.fb.a	ENSGT00940000160295.ib.a #9	ENSGT00940000160295.ib.b.b.b #9	ENSGT00940000160295.ib.b.a #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Steppe mouse	MODERN SPECIES	2890	ENSMSIG00000025810	ENSMSIG00000025818	ENSMSIG00000025826	Krtap2-4 (ENSMSIG00000025829)	Krtap9-3 (ENSMSIG00000025835) #9	Krtap1-3 (ENSMSIG00000025841) #9	Krtap1-4 (ENSMSIG00000025846) #9	Krtap1-5 (ENSMSIG00000025851)	Krtap3-1 (ENSMSIG00000025854) #14	Gm11939 (ENSMSIG00000025860) #15	ENSMSIG00000025863 #16	Krt40 (ENSMSIG00000025867) #18	Krt39 (ENSMSIG00000025878) #19	Krt23 (ENSMSIG00000025887) #20	Krt20 (ENSMSIG00000025894) #21	Krt12 (ENSMSIG00000025906) #22	Krt10 (ENSMSIG00000025917) #23	Krt28 (ENSMSIG00000025924) #24	Krt27 (ENSMSIG00000025937) #25	Krt26 (ENSMSIG00000025947) #26	Krt25 (ENSMSIG00000025951) #27	Krt24 (ENSMSIG00000025961) #28	Krt222 (ENSMSIG00000025974) #29	ENSMSIG00000025987 #30	ENSMSIG00000026011	Ccr7 (ENSMSIG00000026032) #31	Tns4 (ENSMSIG00000026039) #32	Igfbp4 (ENSMSIG00000026061) #33	Top2a (ENSMSIG00000026083) #34	Gjd3 (ENSMSIG00000026168)	Rara (ENSMSIG00000026176) #35
spretus	MODERN SPECIES	2	MGP_SPRETEiJ_G0017976	MGP_SPRETEiJ_G0017975	MGP_SPRETEiJ_G0017974	Krtap9-3 (MGP_SPRETEiJ_G0017973) #9	Krtap1-3 (MGP_SPRETEiJ_G0017972) #9	Krtap1-4 (MGP_SPRETEiJ_G0017971) #9	Krtap1-5 (MGP_SPRETEiJ_G0017970)	Krtap3-1 (MGP_SPRETEiJ_G0017969) #14	Gm11939 (MGP_SPRETEiJ_G0017968) #15	MGP_SPRETEiJ_G0017967 ##14	MGP_SPRETEiJ_G0017966 #16	Krt40 (MGP_SPRETEiJ_G0017965) #18	Krt39 (MGP_SPRETEiJ_G0017964) #19	Krt23 (MGP_SPRETEiJ_G0017963) #20	Krt20 (MGP_SPRETEiJ_G0017962) #21	Krt12 (MGP_SPRETEiJ_G0017961) #22	Krt10 (MGP_SPRETEiJ_G0017960) #23	Krt28 (MGP_SPRETEiJ_G0017959) #24	Krt27 (MGP_SPRETEiJ_G0017958) #25	Krt26 (MGP_SPRETEiJ_G0017957) #26	Krt25 (MGP_SPRETEiJ_G0017956) #27	Krt24 (MGP_SPRETEiJ_G0017955) #28	Krt222 (MGP_SPRETEiJ_G0017954) #29	Smarce1 (MGP_SPRETEiJ_G0017953) #30	Ccr7 (MGP_SPRETEiJ_G0017952) #31	Tns4 (MGP_SPRETEiJ_G0017951) #32	Igfbp4 (MGP_SPRETEiJ_G0017950) #33	Top2a (MGP_SPRETEiJ_G0017949) #34	Gjd3 (MGP_SPRETEiJ_G0017948)	Rara (MGP_SPRETEiJ_G0017947) #35	Cdc6 (MGP_SPRETEiJ_G0017946) #36
Ryukyu mouse	MODERN SPECIES	2	MGP_CAROLIEiJ_G0017132	MGP_CAROLIEiJ_G0017131	Gm11938 (MGP_CAROLIEiJ_G0017130)	Krtap9-3 (MGP_CAROLIEiJ_G0017129) #9	Krtap1-3 (MGP_CAROLIEiJ_G0017128) #9	Krtap1-4 (MGP_CAROLIEiJ_G0017127) #9	Krtap1-5 (MGP_CAROLIEiJ_G0017126)	Krtap3-1 (MGP_CAROLIEiJ_G0017125) #14	Gm11939 (MGP_CAROLIEiJ_G0017124) #15	MGP_CAROLIEiJ_G0017123 #16	MGP_CAROLIEiJ_G0017122 #16	Krt40 (MGP_CAROLIEiJ_G0017121) #18	Krt39 (MGP_CAROLIEiJ_G0017120) #19	Krt23 (MGP_CAROLIEiJ_G0017119) #20	Krt20 (MGP_CAROLIEiJ_G0017118) #21	Krt12 (MGP_CAROLIEiJ_G0017117) #22	Krt10 (MGP_CAROLIEiJ_G0017116) #23	Krt28 (MGP_CAROLIEiJ_G0017115) #24	Krt27 (MGP_CAROLIEiJ_G0017114) #25	Krt26 (MGP_CAROLIEiJ_G0017113) #26	Krt25 (MGP_CAROLIEiJ_G0017112) #27	Krt24 (MGP_CAROLIEiJ_G0017111) #28	Krt222 (MGP_CAROLIEiJ_G0017110) #29	Smarce1 (MGP_CAROLIEiJ_G0017109) #30	Ccr7 (MGP_CAROLIEiJ_G0017108) #31	Tns4 (MGP_CAROLIEiJ_G0017107) #32	Igfbp4 (MGP_CAROLIEiJ_G0017106) #33	Top2a (MGP_CAROLIEiJ_G0017105) #34	Gjd3 (MGP_CAROLIEiJ_G0017104)	Rara (MGP_CAROLIEiJ_G0017103) #35	Cdc6 (MGP_CAROLIEiJ_G0017102) #36
Shrew mouse	MODERN SPECIES	5	MGP_PahariEiJ_G0018261	MGP_PahariEiJ_G0018260	MGP_PahariEiJ_G0018259	Krtap9-3 (MGP_PahariEiJ_G0018258) #9	MGP_PahariEiJ_G0018257 #9	Krtap1-4 (MGP_PahariEiJ_G0018256) #9	Krtap1-5 (MGP_PahariEiJ_G0018255)	Krtap3-1 (MGP_PahariEiJ_G0018254) #14	Gm11939 (MGP_PahariEiJ_G0018253) #15	MGP_PahariEiJ_G0018252 #16	MGP_PahariEiJ_G0018251 #16	Krt40 (MGP_PahariEiJ_G0018250) #18	Krt39 (MGP_PahariEiJ_G0018249) #19	Krt23 (MGP_PahariEiJ_G0018248) #20	Krt20 (MGP_PahariEiJ_G0018247) #21	Krt12 (MGP_PahariEiJ_G0018246) #22	Krt10 (MGP_PahariEiJ_G0018245) #23	MGP_PahariEiJ_G0018244 #24	Krt27 (MGP_PahariEiJ_G0018243) #25	Krt26 (MGP_PahariEiJ_G0018242) #26	Krt25 (MGP_PahariEiJ_G0018241) #27	Krt24 (MGP_PahariEiJ_G0018240) #28	Krt222 (MGP_PahariEiJ_G0018239) #29	Smarce1 (MGP_PahariEiJ_G0018238) #30	Ccr7 (MGP_PahariEiJ_G0018237) #31	Tns4 (MGP_PahariEiJ_G0018236) #32	MGP_PahariEiJ_G0018235 #33	Top2a (MGP_PahariEiJ_G0018234) #34	Gjd3 (MGP_PahariEiJ_G0018233)	Rara (MGP_PahariEiJ_G0018232) #35	Cdc6 (MGP_PahariEiJ_G0018231) #36
Rat	MODERN SPECIES	1	Krtap2-4l (ENSRNOG00000060847)	Krtap2-1 (ENSRNOG00000065269)	RGD1561684 (ENSRNOG00000063772)	LOC100365588 (ENSRNOG00000053283) #9	Krtap1-3 (ENSRNOG00000052388) #9	Krtap1-1 (ENSRNOG00000012955) #9	Krtap1-5 (ENSRNOG00000054186)	Krtap3-1 (ENSRNOG00000012544) #14	LOC120095334 (ENSRNOG00000060205) #15	Krtap3-2 (ENSRNOG00000049383) #16	Krtap3-3 (ENSRNOG00000045678) #16	Krt40 (ENSRNOG00000013896) #18	Krt39 (ENSRNOG00000031422) #19	Krt23 (ENSRNOG00000011907) #20	Krt20 (ENSRNOG00000027139) #21	Krt12 (ENSRNOG00000011986) #22	Krt10 (ENSRNOG00000030170) #23	Krt28 (ENSRNOG00000011846) #24	Krt27 (ENSRNOG00000011628) #25	Krt26 (ENSRNOG00000033617) #26	Krt25 (ENSRNOG00000011196) #27	Krt24 (ENSRNOG00000010970) #28	Krt222 (ENSRNOG00000010839) #29	Smarce1 (ENSRNOG00000010676) #30	Ccr7 (ENSRNOG00000010665) #31	Tns4 (ENSRNOG00000027350) #32	Igfbp4 (ENSRNOG00000010635) #33	Top2a (ENSRNOG00000053047) #34	Gjd3 (ENSRNOG00000051691)	Rara (ENSRNOG00000009972) #35	Cdc6 (ENSRNOG00000027787) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	912	ENSNGAG00000014947	ENSNGAG00000015529	ENSNGAG00000015518	ENSNGAG00000016313	ENSNGAG00000015404 #9	ENSNGAG00000011138 #9	Krtap1-4 (ENSNGAG00000014313) #9	Krtap1-5 (ENSNGAG00000013189)	Krtap3-1 (ENSNGAG00000014967) #14	ENSNGAG00000014681 #16	ENSNGAG00000015155 #16	Krt40 (ENSNGAG00000002573) #18	Krt39 (ENSNGAG00000017057) #19	Krt23 (ENSNGAG00000003686) #20	Krt20 (ENSNGAG00000012272) #21	Krt12 (ENSNGAG00000017518) #22	Krt10 (ENSNGAG00000017006) #23	Krt28 (ENSNGAG00000020295) #24	Krt27 (ENSNGAG00000019608) #25	Krt26 (ENSNGAG00000010579) #26	Krt25 (ENSNGAG00000000113) #27	Krt24 (ENSNGAG00000017103) #28	Krt222 (ENSNGAG00000014550) #29	ENSNGAG00000015419 #30	Ccr7 (ENSNGAG00000010036) #31
Lesser Egyptian jerboa	MODERN SPECIES	56	ENSJJAG00000022802	ENSJJAG00000021359	ENSJJAG00000021927	ENSJJAG00000022794	ENSJJAG00000006288	ENSJJAG00000005972	ENSJJAG00000022051 #9	ENSJJAG00000006226 #9	Krtap3-1 (ENSJJAG00000006011) #14	ENSJJAG00000006371 #16	ENSJJAG00000006041 #16	Krt40 (ENSJJAG00000022059) #18	Krt39 (ENSJJAG00000021955) #19	Krt23 (ENSJJAG00000022215) #20	Krt20 (ENSJJAG00000022728) #21	Krt12 (ENSJJAG00000021975) #22	Krt10 (ENSJJAG00000022778) #23	Krt28 (ENSJJAG00000022837) #24	Krt27 (ENSJJAG00000023044) #25	Krt26 (ENSJJAG00000009739) #26	Krt25 (ENSJJAG00000023627) #27	Krt24 (ENSJJAG00000023143) #28	Krt222 (ENSJJAG00000021966) #29	Smarce1 (ENSJJAG00000023161) #30	Ccr7 (ENSJJAG00000002196) #31	Tns4 (ENSJJAG00000003969) #32	Igfbp4 (ENSJJAG00000000680) #33	Top2a (ENSJJAG00000007045) #34	Gjd3 (ENSJJAG00000009539)	Rara (ENSJJAG00000001668) #35	Cdc6 (ENSJJAG00000022817) #36
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000163931	ENSGT00940000154448.b.b.b.b.e.a	ENSGT00940000159486.e.a	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000163658	ENSGT00940000164459	ENSGT00940000156135	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005002182	ENSSVLG00005002196	ENSSVLG00005002212 #7	ENSSVLG00005002228 #9	ENSSVLG00005002240 #9	ENSSVLG00005002256 #9	KRTAP3-1 (ENSSVLG00005002274) #14	ENSSVLG00005002286 #15	ENSSVLG00005002295 #16	ENSSVLG00005002312 #16	KRT40 (ENSSVLG00005002328) #18	KRT39 (ENSSVLG00005002361) #19	KRT23 (ENSSVLG00005002405) #20	KRT20 (ENSSVLG00005002465) #21	ENSSVLG00005002497 #22	ENSSVLG00005002521 #22	KRT10 (ENSSVLG00005002550) #23	KRT28 (ENSSVLG00005002575) #24	KRT27 (ENSSVLG00005002600) #25	KRT26 (ENSSVLG00005002624) #26	KRT25 (ENSSVLG00005002659) #27	KRT24 (ENSSVLG00005002690) #28	ENSSVLG00005002717	ENSSVLG00005002734	KRT222 (ENSSVLG00005002764) #29	SMARCE1 (ENSSVLG00005002799) #30	CCR7 (ENSSVLG00005002834) #31	TNS4 (ENSSVLG00005002865) #32	IGFBP4 (ENSSVLG00005002915) #33	TOP2A (ENSSVLG00005002957) #34	GJD3 (ENSSVLG00005002978)
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005002159	ENSSVLG00005002182	ENSSVLG00005002196	ENSSVLG00005002212 #7	ENSSVLG00005002228 #9	ENSSVLG00005002240 #9	ENSSVLG00005002256 #9	KRTAP3-1 (ENSSVLG00005002274) #14	ENSSVLG00005002286 #15	ENSSVLG00005002295 #16	ENSSVLG00005002312 #16	KRT40 (ENSSVLG00005002328) #18	KRT39 (ENSSVLG00005002361) #19	KRT23 (ENSSVLG00005002405) #20	KRT20 (ENSSVLG00005002465) #21	ENSSVLG00005002497 #22	ENSSVLG00005002521 #22	KRT10 (ENSSVLG00005002550) #23	KRT28 (ENSSVLG00005002575) #24	KRT27 (ENSSVLG00005002600) #25	KRT26 (ENSSVLG00005002624) #26	KRT25 (ENSSVLG00005002659) #27	KRT24 (ENSSVLG00005002690) #28	ENSSVLG00005002717	ENSSVLG00005002734	KRT222 (ENSSVLG00005002764) #29	SMARCE1 (ENSSVLG00005002799) #30	CCR7 (ENSSVLG00005002834) #31	TNS4 (ENSSVLG00005002865) #32	IGFBP4 (ENSSVLG00005002915) #33	TOP2A (ENSSVLG00005002957) #34
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000161991	ENSGT00940000153980.j.a.b.b.c.a	ENSGT00940000163426	ENSGT00940000153980.j.a.b.b.c.b	ENSGT00940000153980.j.a.b.b.d	ENSGT00860000136155	ENSGT00940000163658	ENSGT00940000164459	ENSGT00390000001157.B #15	ENSGT00390000001157.C.gc.b #16	ENSGT00390000001157.C.gc.a #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000153980.j.a.b.b.c.a	ENSGT00940000153980.j.a.a	ENSGT00940000153980.j.a.b.b.c.b	ENSGT00940000153980.j.a.b.b.d	ENSGT00940000163416	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.B #15	ENSGT00390000001157.C.gc.b #16	ENSGT00390000001157.C.gc.a #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Arctic ground squirrel	MODERN SPECIES	46	KRTAP16-1 (ENSUPAG00010008810)	KRTAP29-1 (ENSUPAG00010008797)	ENSUPAG00010008769	ENSUPAG00010008754	ENSUPAG00010008750	ENSUPAG00010008626 #9	ENSUPAG00010008623	ENSUPAG00010008620 ##14	ENSUPAG00010008616 #15	ENSUPAG00010008611 #16	ENSUPAG00010008604 #16	KRT40 (ENSUPAG00010008559) #18	KRT39 (ENSUPAG00010008539) #19	KRT23 (ENSUPAG00010008531) #20	KRT20 (ENSUPAG00010008517) #21	KRT12 (ENSUPAG00010008495) #22	KRT10 (ENSUPAG00010008483) #23	KRT28 (ENSUPAG00010008467) #24	KRT27 (ENSUPAG00010008459) #25	KRT26 (ENSUPAG00010008447) #26	KRT25 (ENSUPAG00010008441) #27	KRT24 (ENSUPAG00010008434) #28	KRT222 (ENSUPAG00010008427) #29	SMARCE1 (ENSUPAG00010008422) #30	CCR7 (ENSUPAG00010008418) #31	TNS4 (ENSUPAG00010008407) #32	IGFBP4 (ENSUPAG00010008401) #33	TOP2A (ENSUPAG00010008363) #34	RARA (ENSUPAG00010008330) #35	CDC6 (ENSUPAG00010008314) #36	WIPF2 (ENSUPAG00010008280) #37
Squirrel	MODERN SPECIES	90	ENSSTOG00000013195	ENSSTOG00000031988	ENSSTOG00000032994	ENSSTOG00000033084	ENSSTOG00000027734	ENSSTOG00000023947	ENSSTOG00000029114	ENSSTOG00000021731	ENSSTOG00000012673 #9	ENSSTOG00000012507	ENSSTOG00000027131 ##14	ENSSTOG00000025033 #16	ENSSTOG00000019917 #16	KRT39 (ENSSTOG00000013190) #19	KRT23 (ENSSTOG00000013795) #20	KRT12 (ENSSTOG00000013295) #22	KRT10 (ENSSTOG00000002204) #23	KRT28 (ENSSTOG00000032131) #24	KRT27 (ENSSTOG00000002187) #25	KRT26 (ENSSTOG00000034065) #26	KRT25 (ENSSTOG00000002183) #27	KRT24 (ENSSTOG00000002178) #28	KRT222 (ENSSTOG00000029003) #29	SMARCE1 (ENSSTOG00000002175) #30	CCR7 (ENSSTOG00000001864) #31	TNS4 (ENSSTOG00000004876) #32	IGFBP4 (ENSSTOG00000029166) #33	TOP2A (ENSSTOG00000004794) #34	GJD3 (ENSSTOG00000019754)	RARA (ENSSTOG00000004746) #35	CDC6 (ENSSTOG00000004716) #36
Alpin marmot	MODERN SPECIES	42	ENSMMMG00000006802	ENSMMMG00000007015	KRTAP16-1 (ENSMMMG00000007017)	ENSMMMG00000007037	ENSMMMG00000007061	ENSMMMG00000007085	ENSMMMG00000007146	ENSMMMG00000007150 ##14	ENSMMMG00000007156 #15	ENSMMMG00000007160 #16	ENSMMMG00000007167 #16	KRT40 (ENSMMMG00000007173) #18	KRT39 (ENSMMMG00000007199) #19	KRT23 (ENSMMMG00000007227) #20	KRT20 (ENSMMMG00000007239) #21	KRT12 (ENSMMMG00000007259) #22	KRT10 (ENSMMMG00000007279) #23	KRT28 (ENSMMMG00000007288) #24	KRT27 (ENSMMMG00000007294) #25	KRT26 (ENSMMMG00000007307) #26	KRT25 (ENSMMMG00000007316) #27	KRT24 (ENSMMMG00000007326) #28	KRT222 (ENSMMMG00000007351) #29	SMARCE1 (ENSMMMG00000007365) #30	CCR7 (ENSMMMG00000007384) #31	TNS4 (ENSMMMG00000007390) #32	IGFBP4 (ENSMMMG00000007401) #33	TOP2A (ENSMMMG00000007405) #34	RARA (ENSMMMG00000007451) #35	CDC6 (ENSMMMG00000007492) #36	WIPF2 (ENSMMMG00000007511) #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000159486.f	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00390000018397	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000153980.j.a.a	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000163931	ENSGT00940000159486.e.a	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00390000018397	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000153980.j.a.a	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000163931	ENSGT00940000159486.e.a	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00390000018397	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Long-tailed chinchilla	MODERN SPECIES	158	ENSCLAG00000015082	ENSCLAG00000017906	ENSCLAG00000015077	ENSCLAG00000015152	ENSCLAG00000018011	ENSCLAG00000013798	ENSCLAG00000018055 #9	ENSCLAG00000015264 #9	ENSCLAG00000017986 #9	ENSCLAG00000018003	KRTAP3-1 (ENSCLAG00000017980) #14	ENSCLAG00000017863 #16	KRT40 (ENSCLAG00000014940) #18	KRT39 (ENSCLAG00000013824) #19	KRT23 (ENSCLAG00000014628) #20	KRT12 (ENSCLAG00000015867) #22	KRT10 (ENSCLAG00000017300) #23	KRT26 (ENSCLAG00000016281) #26	KRT28 (ENSCLAG00000015353) #24	KRT24 (ENSCLAG00000015192) #28	KRT222 (ENSCLAG00000016700) #29	SMARCE1 (ENSCLAG00000015303) #30	CCR7 (ENSCLAG00000016277) #31	TNS4 (ENSCLAG00000013766) #32	IGFBP4 (ENSCLAG00000015611) #33	ENSCLAG00000016494	TOP2A (ENSCLAG00000014772) #34	RARA (ENSCLAG00000016604) #35	CDC6 (ENSCLAG00000015306) #36	WIPF2 (ENSCLAG00000015019) #37	RAPGEFL1 (ENSCLAG00000013660)
Degu	MODERN SPECIES	97	KRTAP16-1 (ENSODEG00000017880)	ENSODEG00000017810	ENSODEG00000017804	ENSODEG00000017801	ENSODEG00000017790	ENSODEG00000017966	ENSODEG00000017878	ENSODEG00000020458	ENSODEG00000017796 #9	KRTAP3-1 (ENSODEG00000020553) #14	ENSODEG00000020535 #16	ENSODEG00000020505 #16	KRT40 (ENSODEG00000017770) #18	KRT39 (ENSODEG00000017870) #19	KRT23 (ENSODEG00000017766) #20	KRT12 (ENSODEG00000017798) #22	KRT10 (ENSODEG00000018133) #23	KRT28 (ENSODEG00000017869) #24	KRT27 (ENSODEG00000017814) #25	KRT26 (ENSODEG00000017748) #26	KRT25 (ENSODEG00000017866) #27	KRT24 (ENSODEG00000017754) #28	KRT222 (ENSODEG00000017765) #29	ENSODEG00000017812 #30	CCR7 (ENSODEG00000017849) #31	TNS4 (ENSODEG00000017791) #32	IGFBP4 (ENSODEG00000017749) #33	RDM1 (ENSODEG00000017788)	TOP2A (ENSODEG00000018034) #34	GJD3 (ENSODEG00000017680)	RARA (ENSODEG00000017623) #35
Guinea pig	MODERN SPECIES	53	ENSCPOG00000039942	ENSCPOG00000031771	ENSCPOG00000040575	ENSCPOG00000037983	ENSCPOG00000030187	ENSCPOG00000034760 #9	ENSCPOG00000031237 #9	ENSCPOG00000038991 #9	ENSCPOG00000009368	KRTAP3-1 (ENSCPOG00000011046) #14	ENSCPOG00000038722 #16	ENSCPOG00000011044 #16	KRT40 (ENSCPOG00000011037) #18	KRT39 (ENSCPOG00000011033) #19	KRT23 (ENSCPOG00000011030) #20	ENSCPOG00000034129 #22	ENSCPOG00000033395 #23	ENSCPOG00000036632 #23	KRT28 (ENSCPOG00000033049) #24	KRT27 (ENSCPOG00000030964) #25	KRT26 (ENSCPOG00000038591) #26	KRT25 (ENSCPOG00000000495) #27	KRT24 (ENSCPOG00000032839) #28	KRT222 (ENSCPOG00000023380) #29	SMARCE1 (ENSCPOG00000000173) #30	CCR7 (ENSCPOG00000031024) #31	TNS4 (ENSCPOG00000010254) #32	IGFBP4 (ENSCPOG00000008055) #33	ENSCPOG00000001495	TOP2A (ENSCPOG00000006799) #34	GJD3 (ENSCPOG00000039750)
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000033664	ENSHGLG00000011418	ENSHGLG00000046541	ENSHGLG00000048443	ENSHGLG00000016152	ENSHGLG00000036467	ENSHGLG00000045568 #9	ENSHGLG00000020641	KRTAP3-1 (ENSHGLG00000020885) #14	ENSHGLG00000044225 #15	ENSHGLG00000049120 #16	ENSHGLG00000032503 #16	KRT40 (ENSHGLG00000014814) #18	KRT39 (ENSHGLG00000009907) #19	KRT23 (ENSHGLG00000012804) #20	KRT12 (ENSHGLG00000014783) #22	KRT10 (ENSHGLG00000010577) #23	KRT28 (ENSHGLG00000012817) #24	KRT26 (ENSHGLG00000018049) #26	KRT25 (ENSHGLG00000016382) #27	KRT24 (ENSHGLG00000016476) #28	KRT222 (ENSHGLG00000014433) #29	SMARCE1 (ENSHGLG00000014523) #30	ENSHGLG00000031415	CCR7 (ENSHGLG00000009998) #31	TNS4 (ENSHGLG00000011575) #32	IGFBP4 (ENSHGLG00000009899) #33	ENSHGLG00000011280	TOP2A (ENSHGLG00000012875) #34	GJD3 (ENSHGLG00000014304)	RARA (ENSHGLG00000038969) #35
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000163931	ENSGT00940000159486.f	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000159486.e.a	ENSGT00940000155433	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.B #15	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Rabbit	MODERN SPECIES	10	ENSOCUG00000036372	ENSOCUG00000021896	ENSOCUG00000031432	ENSOCUG00000030603	ENSOCUG00000032281	ENSOCUG00000036283 #9	ENSOCUG00000008528 #9	ENSOCUG00000029827	KRTAP3-1 (ENSOCUG00000015615) #14	ENSOCUG00000031203 #15	ENSOCUG00000024778 #16	ENSOCUG00000024352 #16	KRT40 (ENSOCUG00000015603) #18	KRT39 (ENSOCUG00000015593) #19	KRT23 (ENSOCUG00000017694) #20	KRT12 (ENSOCUG00000017689) #22	KRT28 (ENSOCUG00000015132) #24	KRT10 (ENSOCUG00000011731) #23	KRT26 (ENSOCUG00000008999) #26	KRT25 (ENSOCUG00000008992) #27	KRT222 (ENSOCUG00000027447) #29	SMARCE1 (ENSOCUG00000008981) #30	CCR7 (ENSOCUG00000025569) #31	TNS4 (ENSOCUG00000002830) #32	IGFBP4 (ENSOCUG00000002828) #33	TOP2A (ENSOCUG00000002814) #34	GJD3 (ENSOCUG00000004916)	RARA (ENSOCUG00000004903) #35	CDC6 (ENSOCUG00000004898) #36	ENSOCUG00000029564 #37	RAPGEFL1 (ENSOCUG00000023409)
Pika	MODERN SPECIES	4691														KRT23 (ENSOPRG00000009842) #20	KRT20 (ENSOPRG00000009828) #21	KRT12 (ENSOPRG00000009810) #22	ENSOPRG00000009788 #23	ENSOPRG00000018471 #24	KRT27 (ENSOPRG00000009774) #25	KRT26 (ENSOPRG00000009761) #26	KRT25 (ENSOPRG00000009745) #27	KRT24 (ENSOPRG00000009728) #28	KRT222 (ENSOPRG00000018441) #29
Tree shrew	MODERN SPECIES	4713															KRT20 (ENSTBEG00000016636) #21	KRT12 (ENSTBEG00000016553) #22
Primates	ANCESTRAL SPECIES	3	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163931	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT00940000164415	ENSGT00390000003628.b.c.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000156135	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163931	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT00940000164415	ENSGT00390000003628.b.c.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000156135.h	ENSGT00940000164350.B	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000159486	ENSGT00940000163975	ENSGT00940000154448.b.b.b.b	ENSGT00940000162736 #7	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d.p.b #30	ENSGT00940000164415	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000163975	ENSGT00940000165435	ENSGT00940000154448.b.b.b.b	ENSGT00940000164350.B	ENSGT00940000164350.A	ENSGT00940000165697	ENSGT00940000162736 #7	ENSGT00940000160443.o	ENSGT00940000160443.p	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000164350.A	ENSGT00940000164350.B	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000162736 #7	ENSGT00940000160443.o.a	ENSGT00940000160443.o.b.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000164350.B	ENSGT00940000154448.b.b.b.b	ENSGT00940000165435	ENSGT00940000163975.e.b	ENSGT00940000159486	ENSGT00940000162736 #7	ENSGT00940000160443.o.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000163975.e.b	ENSGT00940000163975.e.a.b	ENSGT00940000163975.e.a.a	ENSGT00940000159486	ENSGT00940000162736.w.a #7	ENSGT00940000160443.o.a	ENSGT00940000160443.o.b.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C.x #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Gorilla	MODERN SPECIES	18	ENSGGOG00000043973	ENSGGOG00000036943 #7	ENSGGOG00000038087 #7	ENSGGOG00000040059 #7	ENSGGOG00000041957 #7	KRTAP1-1 (ENSGGOG00000016411)	KRTAP1-3 (ENSGGOG00000008142)	ENSGGOG00000027718	KRTAP3-1 (ENSGGOG00000025337) #14	ENSGGOG00000043613 #16	ENSGGOG00000038810 #16	KRT40 (ENSGGOG00000006511) #18	KRT39 (ENSGGOG00000017063) #19	KRT23 (ENSGGOG00000025840) #20	KRT20 (ENSGGOG00000004278) #21	KRT12 (ENSGGOG00000004274) #22	ENSGGOG00000038478	KRT10 (ENSGGOG00000000457) #23	KRT28 (ENSGGOG00000009707) #24	KRT27 (ENSGGOG00000013291) #25	KRT26 (ENSGGOG00000011236) #26	KRT25 (ENSGGOG00000043356) #27	KRT24 (ENSGGOG00000009695) #28	KRT222 (ENSGGOG00000013714) #29	SMARCE1 (ENSGGOG00000011803) #30	CCR7 (ENSGGOG00000016340) #31	TNS4 (ENSGGOG00000009684) #32	IGFBP4 (ENSGGOG00000009883) #33	TOP2A (ENSGGOG00000012704) #34	GJD3 (ENSGGOG00000003119)	ENSGGOG00000003114 #35
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000163975.e.a.b	ENSGT00940000163975.e.a.a	ENSGT00940000159486	ENSGT00940000162736.w.a #7	ENSGT00940000160443.o.a	ENSGT00940000160443.o.b.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C.x #16	ENSGT00390000001157.C.w #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Human	MODERN SPECIES	8	KRTAP2-4 (ENSG00000213417) #7	KRTAP2-3 (ENSG00000212724) #7	KRTAP2-2 (ENSG00000214518) #7	KRTAP2-1 (ENSG00000212725) #7	KRTAP1-1 (ENSG00000188581)	KRTAP1-3 (ENSG00000221880)	KRTAP1-4 (ENSG00000204887)	KRTAP1-5 (ENSG00000221852)	KRTAP3-1 (ENSG00000212901) #14	KRTAP3-2 (ENSG00000212900) #16	KRTAP3-3 (ENSG00000212899) #16	KRT40 (ENSG00000204889) #18	KRT39 (ENSG00000196859) #19	KRT23 (ENSG00000108244) #20	KRT20 (ENSG00000171431) #21	KRT12 (ENSG00000187242) #22	KRT10 (ENSG00000186395) #23	KRT28 (ENSG00000173908) #24	KRT27 (ENSG00000171446) #25	KRT26 (ENSG00000186393) #26	KRT25 (ENSG00000204897) #27	KRT24 (ENSG00000167916) #28	KRT222 (ENSG00000213424) #29	SMARCE1 (ENSG00000073584) #30	CCR7 (ENSG00000126353) #31	TNS4 (ENSG00000131746) #32	IGFBP4 (ENSG00000141753) #33	TOP2A (ENSG00000131747) #34	GJD3 (ENSG00000183153)	RARA (ENSG00000131759) #35	CDC6 (ENSG00000094804) #36
Pan	ANCESTRAL SPECIES	3	ENSGT00940000165435	ENSGT00940000163975.e.b.b	ENSGT00940000163975.f	ENSGT00940000163975.e.b.a	ENSGT00940000162736.w.a #7	ENSGT00940000160443.o.a	ENSGT00940000160443.o.b.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C.x #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Chimpanzee	MODERN SPECIES	8	KRTAP4-11 (ENSPTRG00000043038)	ENSPTRG00000009149 #7	ENSPTRG00000042904 #7	ENSPTRG00000030932 #7	KRTAP1-1 (ENSPTRG00000042384)	KRTAP1-3 (ENSPTRG00000039138)	KRTAP1-4 (ENSPTRG00000043306)	KRTAP1-5 (ENSPTRG00000009145)	KRTAP3-1 (ENSPTRG00000009141) #14	ENSPTRG00000048871 #16	ENSPTRG00000049793 #16	KRT40 (ENSPTRG00000030928) #18	KRT39 (ENSPTRG00000023017) #19	KRT23 (ENSPTRG00000009137) #20	KRT20 (ENSPTRG00000009135) #21	KRT12 (ENSPTRG00000009134) #22	KRT10 (ENSPTRG00000009132) #23	KRT28 (ENSPTRG00000009131) #24	KRT27 (ENSPTRG00000009130) #25	KRT26 (ENSPTRG00000030927) #26	KRT25 (ENSPTRG00000009129) #27	KRT24 (ENSPTRG00000009128) #28	KRT222 (ENSPTRG00000034332) #29	SMARCE1 (ENSPTRG00000022902) #30	CCR7 (ENSPTRG00000009125) #31	TNS4 (ENSPTRG00000009124) #32	IGFBP4 (ENSPTRG00000009123) #33	TOP2A (ENSPTRG00000009122) #34	GJD3 (ENSPTRG00000009121)	RARA (ENSPTRG00000009120) #35	CDC6 (ENSPTRG00000009119) #36
Bonobo	MODERN SPECIES	8	ENSPPAG00000035558	ENSPPAG00000034671	ENSPPAG00000043333	ENSPPAG00000024926	ENSPPAG00000000910 #7	ENSPPAG00000036449	KRTAP1-1 (ENSPPAG00000017831)	KRTAP1-4 (ENSPPAG00000021249)	KRTAP1-5 (ENSPPAG00000012582)	KRTAP3-1 (ENSPPAG00000018240) #14	ENSPPAG00000022850 #16	KRT40 (ENSPPAG00000031205) #18	KRT39 (ENSPPAG00000041593) #19	KRT23 (ENSPPAG00000030794) #20	KRT20 (ENSPPAG00000031348) #21	KRT12 (ENSPPAG00000034686) #22	KRT10 (ENSPPAG00000039195) #23	KRT28 (ENSPPAG00000027727) #24	KRT27 (ENSPPAG00000038824) #25	KRT26 (ENSPPAG00000043196) #26	KRT25 (ENSPPAG00000030815) #27	ENSPPAG00000032199 #28	KRT222 (ENSPPAG00000027422) #29	SMARCE1 (ENSPPAG00000037636) #30	CCR7 (ENSPPAG00000042341) #31	TNS4 (ENSPPAG00000028272) #32	ENSPPAG00000034557 #33	TOP2A (ENSPPAG00000043649) #34	ENSPPAG00000043874 #35	CDC6 (ENSPPAG00000038406) #36	WIPF2 (ENSPPAG00000041889) #37
Orangutan	MODERN SPECIES	8	KRTAP4-8 (ENSPPYG00000008438)	ENSPPYG00000008437	ENSPPYG00000036502 #7	ENSPPYG00000030171 #7	ENSPPYG00000037202 #7	KRTAP1-1 (ENSPPYG00000008442)	KRTAP1-4 (ENSPPYG00000008958)	KRTAP1-5 (ENSPPYG00000008959)	KRTAP3-1 (ENSPPYG00000035960) #14	ENSPPYG00000041168 #16	ENSPPYG00000035156 #16	KRT40 (ENSPPYG00000008445) #18	KRT39 (ENSPPYG00000008446) #19	KRT23 (ENSPPYG00000008447) #20	KRT20 (ENSPPYG00000030597) #21	KRT12 (ENSPPYG00000041076) #22	ENSPPYG00000008448	KRT10 (ENSPPYG00000008449) #23	KRT28 (ENSPPYG00000008450) #24	KRT27 (ENSPPYG00000008451) #25	KRT26 (ENSPPYG00000008452) #26	KRT25 (ENSPPYG00000008453) #27	KRT24 (ENSPPYG00000008454) #28	KRT222 (ENSPPYG00000008455) #29	SMARCE1 (ENSPPYG00000008456) #30	CCR7 (ENSPPYG00000008457) #31	TNS4 (ENSPPYG00000040458) #32	IGFBP4 (ENSPPYG00000039119) #33	TOP2A (ENSPPYG00000008460) #34	GJD3 (ENSPPYG00000008461)	RARA (ENSPPYG00000008462) #35
Gibbon	MODERN SPECIES	9	ETV4 (ENSNLEG00000005715)	ENSNLEG00000026769	ENSNLEG00000031604	ARL4D (ENSNLEG00000032904)	KRTAP4-11 (ENSNLEG00000002385)	KRTAP4-9 (ENSNLEG00000002384)	ENSNLEG00000002382 #7	KRTAP1-5 (ENSNLEG00000029608)	KRTAP1-4 (ENSNLEG00000002379)	ENSNLEG00000036039 #16	ENSNLEG00000036205 #16	KRT40 (ENSNLEG00000002340) #18	KRT39 (ENSNLEG00000002318) #19	KRT23 (ENSNLEG00000002316) #20	KRT20 (ENSNLEG00000002280) #21	KRT12 (ENSNLEG00000002251) #22	KRT10 (ENSNLEG00000002202) #23	KRT28 (ENSNLEG00000027288) #24	KRT27 (ENSNLEG00000002229) #25	KRT26 (ENSNLEG00000002206) #26	ENSNLEG00000002204	KRT25 (ENSNLEG00000002158) #27	KRT24 (ENSNLEG00000002105) #28	KRT222 (ENSNLEG00000002095) #29	SMARCE1 (ENSNLEG00000001957) #30	CCR7 (ENSNLEG00000001950) #31	TNS4 (ENSNLEG00000001944) #32	IGFBP4 (ENSNLEG00000001919) #33	TOP2A (ENSNLEG00000001840) #34	GJD3 (ENSNLEG00000001839)	RARA (ENSNLEG00000001793) #35
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486.y.a	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000162736 #7	ENSGT00940000160443.o.c	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00940000160443.o.d.a	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000162736.s.b.a.b #7	ENSGT00940000162736.s.b.a.a.b #7	ENSGT00940000162736.s.b.a.a.a #7	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Vervet Monkey	MODERN SPECIES	7	KRTAP4-7 (ENSCSAG00000002851)	ENSCSAG00000019029 #7	ENSCSAG00000019030 #7	ENSCSAG00000019031 #7	ENSCSAG00000019032 #7	ENSCSAG00000002849	KRTAP1-4 (ENSCSAG00000019033)	ENSCSAG00000019034	KRTAP3-1 (ENSCSAG00000019035) #14	ENSCSAG00000019036 #16	ENSCSAG00000019037 #16	KRT40 (ENSCSAG00000002848) #18	KRT39 (ENSCSAG00000002844) #19	KRT23 (ENSCSAG00000002841) #20	KRT20 (ENSCSAG00000002839) #21	KRT12 (ENSCSAG00000002838) #22	KRT10 (ENSCSAG00000002835) #23	KRT28 (ENSCSAG00000002833) #24	KRT27 (ENSCSAG00000002830) #25	KRT26 (ENSCSAG00000002826) #26	KRT25 (ENSCSAG00000002820) #27	KRT24 (ENSCSAG00000002815) #28	KRT222 (ENSCSAG00000002811) #29	SMARCE1 (ENSCSAG00000002806) #30	CCR7 (ENSCSAG00000002800) #31	TNS4 (ENSCSAG00000002797) #32	IGFBP4 (ENSCSAG00000002792) #33	ENSCSAG00000002791	TOP2A (ENSCSAG00000002790) #34	ENSCSAG00000002788	GJD3 (ENSCSAG00000019038)
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000162736.s.b.a.b #7	ENSGT00940000154448.b.b.b.b.m.a	ENSGT00940000162736.t #7	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000163975	ENSGT00940000154448.b.b.b.b.m.a	ENSGT00940000162736.t #7	ENSGT00940000160443.o.c	ENSGT00940000162736.s.a.a.a #7	ENSGT00940000160443.p	ENSGT00940000160443.o.d.a	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Olive baboon	MODERN SPECIES	8	ENSPANG00000030200	ENSPANG00000033743	ENSPANG00000032465	ENSPANG00000021570	ENSPANG00000048794 #7	ENSPANG00000049370 #7	ENSPANG00000049731 #7	KRTAP1-4 (ENSPANG00000023265)	ENSPANG00000045487	KRTAP3-1 (ENSPANG00000002591) #14	ENSPANG00000049303 #16	KRT40 (ENSPANG00000021567) #18	KRT39 (ENSPANG00000021566) #19	KRT23 (ENSPANG00000021565) #20	KRT20 (ENSPANG00000021564) #21	KRT12 (ENSPANG00000021563) #22	KRT10 (ENSPANG00000021616) #23	KRT28 (ENSPANG00000032109) #24	KRT27 (ENSPANG00000021625) #25	KRT26 (ENSPANG00000021624) #26	KRT25 (ENSPANG00000021623) #27	KRT24 (ENSPANG00000021622) #28	KRT222 (ENSPANG00000036008) #29	ENSPANG00000021619 #30	CCR7 (ENSPANG00000047079) #31	TNS4 (ENSPANG00000021664) #32	IGFBP4 (ENSPANG00000021663) #33	TOP2A (ENSPANG00000021661) #34	GJD3 (ENSPANG00000021660)	RARA (ENSPANG00000021658) #35	CDC6 (ENSPANG00000021657) #36
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00940000163841.c	ENSGT00940000153980.j.d	ENSGT00940000156135.h.f.a	ENSGT00940000156135.h.f.b.a.b	ENSGT00940000156135.h.f.b.b	ENSGT00940000163975	ENSGT00940000154448.b.b.b.b.m.a	ENSGT00940000162736.t #7	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00390000001157.A.b #14	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Drill	MODERN SPECIES	1283	ENSMLEG00000028300	KRTAP4-1 (ENSMLEG00000039471)	KRTAP4-2 (ENSMLEG00000032197)	KRTAP4-3 (ENSMLEG00000028103)	KRTAP4-5 (ENSMLEG00000014819)	ENSMLEG00000029543	ENSMLEG00000000614 #7	ENSMLEG00000004772 #7	ENSMLEG00000018982 #7	ENSMLEG00000041308	KRTAP3-1 (ENSMLEG00000014783) #14	KRT40 (ENSMLEG00000029742) #18	KRT39 (ENSMLEG00000037917) #19	KRT23 (ENSMLEG00000029121) #20	KRT20 (ENSMLEG00000039504) #21	KRT12 (ENSMLEG00000035998) #22	ENSMLEG00000024984	KRT10 (ENSMLEG00000026149) #23	KRT28 (ENSMLEG00000042231) #24	KRT27 (ENSMLEG00000043409) #25	KRT26 (ENSMLEG00000016638) #26	KRT25 (ENSMLEG00000043162) #27	KRT24 (ENSMLEG00000042485) #28	KRT222 (ENSMLEG00000027116) #29	SMARCE1 (ENSMLEG00000035376) #30	CCR7 (ENSMLEG00000031221) #31	TNS4 (ENSMLEG00000039591) #32	IGFBP4 (ENSMLEG00000038307) #33	TOP2A (ENSMLEG00000040900) #34	RARA (ENSMLEG00000042406) #35	CDC6 (ENSMLEG00000017384) #36
Sooty mangabey	MODERN SPECIES	564	KRT33A (ENSCATG00000039355)	ENSCATG00000029615	ENSCATG00000043038	ENSCATG00000042310	KRTAP9-1 (ENSCATG00000041663)	KRTAP4-4 (ENSCATG00000042277)	KRTAP4-3 (ENSCATG00000033768)	ENSCATG00000021011 #7	ENSCATG00000034203	ENSCATG00000037125	KRTAP3-1 (ENSCATG00000021424) #14	KRT40 (ENSCATG00000034790) #18	KRT39 (ENSCATG00000036783) #19	KRT23 (ENSCATG00000040372) #20	KRT20 (ENSCATG00000039872) #21	KRT12 (ENSCATG00000039373) #22	ENSCATG00000009301	KRT10 (ENSCATG00000044216) #23	KRT28 (ENSCATG00000013336) #24	KRT27 (ENSCATG00000017114) #25	KRT26 (ENSCATG00000032089) #26	KRT25 (ENSCATG00000032084) #27	KRT24 (ENSCATG00000040299) #28	KRT222 (ENSCATG00000025409) #29	SMARCE1 (ENSCATG00000033223) #30	CCR7 (ENSCATG00000041409) #31	TNS4 (ENSCATG00000031207) #32	IGFBP4 (ENSCATG00000035081) #33	TOP2A (ENSCATG00000030085) #34	GJD3 (ENSCATG00000021931)	RARA (ENSCATG00000044638) #35
Macaca	ANCESTRAL SPECIES	4	ENSGT00950000183407	ENSGT00940000163658	ENSGT00940000164459	ENSGT00940000156135.h.f.a	ENSGT00940000156135.h.f.b.a.a.b.a	ENSGT00940000162736.s.a.a.a #7	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00390000001157.A.b #14	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000156135.h.f.b.a.a.b.a	ENSGT00940000156135.h.f.b.a.a.b.b.b	ENSGT00940000163931	ENSGT00940000159486.y.a	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000162736.s.b.a.b #7	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d.p.a #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Rhesus	MODERN SPECIES	7	KRTAP4-1 (ENSMMUG00000065282)	KRTAP4-2 (ENSMMUG00000045776)	ENSMMUG00000020305	KRTAP4-6 (ENSMMUG00000038207)	ENSMMUG00000045996	ENSMMUG00000050719 #7	ENSMMUG00000062533 #7	ENSMMUG00000053239 #7	ENSMMUG00000020301	ENSMMUG00000020299	KRTAP1-4 (ENSMMUG00000020300)	KRT40 (ENSMMUG00000001142) #18	KRT39 (ENSMMUG00000001510) #19	KRT23 (ENSMMUG00000001505) #20	KRT20 (ENSMMUG00000001503) #21	KRT12 (ENSMMUG00000001502) #22	ENSMMUG00000043282	KRT10 (ENSMMUG00000001500) #23	KRT28 (ENSMMUG00000001499) #24	KRT27 (ENSMMUG00000001497) #25	KRT26 (ENSMMUG00000001495) #26	KRT25 (ENSMMUG00000001492) #27	KRT24 (ENSMMUG00000023592) #28	KRT222 (ENSMMUG00000004004) #29	SMARCE1 (ENSMMUG00000004005) #30	CCR7 (ENSMMUG00000002102) #31	TNS4 (ENSMMUG00000009386) #32	IGFBP4 (ENSMMUG00000009384) #33	TOP2A (ENSMMUG00000008941) #34	GJD3 (ENSMMUG00000012489)	RARA (ENSMMUG00000012486) #35
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000034680	KRTAP4-6 (ENSMFAG00000002460)	ENSMFAG00000028572	KRTAP4-7 (ENSMFAG00000000596)	ENSMFAG00000051497 #7	ENSMFAG00000056804	ENSMFAG00000036831	KRTAP1-4 (ENSMFAG00000001642)	ENSMFAG00000046213	KRT40 (ENSMFAG00000044976) #18	ENSMFAG00000052202	KRT39 (ENSMFAG00000033201) #19	ENSMFAG00000060620	KRT23 (ENSMFAG00000038526) #20	KRT20 (ENSMFAG00000003933) #21	KRT12 (ENSMFAG00000003650) #22	ENSMFAG00000016338	KRT10 (ENSMFAG00000038850) #23	KRT28 (ENSMFAG00000040928) #24	KRT27 (ENSMFAG00000039079) #25	KRT26 (ENSMFAG00000001350) #26	KRT25 (ENSMFAG00000037286) #27	KRT24 (ENSMFAG00000039579) #28	KRT222 (ENSMFAG00000035858) #29	ENSMFAG00000042285 #30	CCR7 (ENSMFAG00000032012) #31	TNS4 (ENSMFAG00000001585) #32	IGFBP4 (ENSMFAG00000043180) #33	TOP2A (ENSMFAG00000002270) #34	ENSMFAG00000055548	ENSMFAG00000010310
Pig-tailed macaque	MODERN SPECIES	494	ENSMNEG00000033695	KRTAP4-5 (ENSMNEG00000035983)	ENSMNEG00000035649	ENSMNEG00000045170	ENSMNEG00000042925	ENSMNEG00000001165 #7	ENSMNEG00000023777 #7	ENSMNEG00000038682 #7	ENSMNEG00000043725	ENSMNEG00000029591	KRTAP3-1 (ENSMNEG00000002270) #14	KRT40 (ENSMNEG00000040425) #18	KRT39 (ENSMNEG00000045305) #19	KRT23 (ENSMNEG00000042071) #20	KRT20 (ENSMNEG00000029478) #21	KRT12 (ENSMNEG00000004668) #22	ENSMNEG00000032796	KRT10 (ENSMNEG00000035663) #23	KRT28 (ENSMNEG00000045361) #24	KRT27 (ENSMNEG00000028793) #25	KRT26 (ENSMNEG00000044933) #26	KRT25 (ENSMNEG00000035206) #27	KRT24 (ENSMNEG00000043164) #28	KRT222 (ENSMNEG00000040062) #29	SMARCE1 (ENSMNEG00000010025) #30	CCR7 (ENSMNEG00000030706) #31	TNS4 (ENSMNEG00000040756) #32	IGFBP4 (ENSMNEG00000041735) #33	TOP2A (ENSMNEG00000030734) #34	GJD3 (ENSMNEG00000006880)	RARA (ENSMNEG00000029542) #35
Rhinopithecus	ANCESTRAL SPECIES	61			ENSGT00940000165435	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486.y.a	ENSGT00940000162736.q #7	ENSGT00940000162736.r #7	ENSGT00940000160443.o.d.a	ENSGT00390000001157.A.b #14	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.c.b.a.b.a #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35
Black snub-nosed monkey	MODERN SPECIES	638	ENSRBIG00000038944	ENSRBIG00000036042	ENSRBIG00000033838	KRTAP4-2 (ENSRBIG00000030295)	ENSRBIG00000029755	ENSRBIG00000040600	ENSRBIG00000025008	ENSRBIG00000027251 #7	ENSRBIG00000029137 #7	ENSRBIG00000038757	KRTAP3-1 (ENSRBIG00000001148) #14	KRT40 (ENSRBIG00000033402) #18	KRT39 (ENSRBIG00000031920) #19	KRT23 (ENSRBIG00000029190) #20	KRT20 (ENSRBIG00000039923) #21	KRT12 (ENSRBIG00000028260) #22	ENSRBIG00000033196	KRT10 (ENSRBIG00000042127) #23	KRT28 (ENSRBIG00000018840) #24	KRT27 (ENSRBIG00000041899) #25	KRT26 (ENSRBIG00000036214) #26	KRT25 (ENSRBIG00000044480) #27	KRT24 (ENSRBIG00000044202) #28	ENSRBIG00000036799 #29	SMARCE1 (ENSRBIG00000040707) #30	CCR7 (ENSRBIG00000036537) #31	TNS4 (ENSRBIG00000032169) #32	IGFBP4 (ENSRBIG00000029579) #33	TOP2A (ENSRBIG00000027893) #34	RARA (ENSRBIG00000029995) #35	CDC6 (ENSRBIG00000042270) #36
Golden snub-nosed monkey	MODERN SPECIES	2684														KRT23 (ENSRROG00000032975) #20	KRT20 (ENSRROG00000045233) #21	KRT12 (ENSRROG00000036947) #22	ENSRROG00000034243	KRT10 (ENSRROG00000035060) #23	KRT28 (ENSRROG00000035612) #24	KRT27 (ENSRROG00000041641) #25	KRT26 (ENSRROG00000036051) #26	KRT25 (ENSRROG00000031435) #27	KRT24 (ENSRROG00000010823) #28	KRT222 (ENSRROG00000005797) #29	SMARCE1 (ENSRROG00000028858) #30	CCR7 (ENSRROG00000038793) #31	TNS4 (ENSRROG00000042906) #32	IGFBP4 (ENSRROG00000033641) #33	TOP2A (ENSRROG00000034836) #34	GJD3 (ENSRROG00000016401)	DPH1 (ENSRROG00000027589)
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000164350.B	ENSGT00940000165435	ENSGT00940000163975	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000162736 #7	ENSGT00940000160443.r.b.a	ENSGT00940000160295 #9	ENSGT00940000160443.r.a	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d.p.b #30	ENSGT00940000164415	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000164350.B	ENSGT00940000163975.c	ENSGT00940000156135.h.b.b	ENSGT00940000165435	ENSGT00940000163975.d	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000162736 #7	ENSGT00940000160443.r.a	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d.p.a #30	ENSGT00940000164415	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00940000156135.h.b.a	ENSGT00940000164350.B	ENSGT00940000163975.c	ENSGT00940000156135.h.a.a	ENSGT00940000165435	ENSGT00940000163975.d	ENSGT00940000154448.b.b.b.b	ENSGT00940000162736 #7	ENSGT00940000160443.r.b.a	ENSGT00940000160443.r.a	ENSGT00390000001157.A.b #14	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00940000164415	ENSGT00390000003628.b.c.b.a.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Capuchin	MODERN SPECIES	228	ENSCCAG00000034421	ENSCCAG00000020353	ENSCCAG00000035189	ENSCCAG00000026553	ENSCCAG00000030292	ENSCCAG00000030861	ENSCCAG00000022140	ENSCCAG00000024497 #7	ENSCCAG00000017936	ENSCCAG00000021121	ENSCCAG00000022586	KRT40 (ENSCCAG00000032652) #18	KRT39 (ENSCCAG00000029088) #19	KRT23 (ENSCCAG00000030267) #20	KRT20 (ENSCCAG00000032974) #21	KRT12 (ENSCCAG00000032972) #22	KRT10 (ENSCCAG00000036373) #23	KRT28 (ENSCCAG00000037023) #24	KRT27 (ENSCCAG00000009302) #25	KRT26 (ENSCCAG00000022891) #26	KRT25 (ENSCCAG00000025845) #27	KRT24 (ENSCCAG00000037342) #28	KRT222 (ENSCCAG00000032779) #29	ENSCCAG00000021368	SMARCE1 (ENSCCAG00000025244) #30	CCR7 (ENSCCAG00000024858) #31	TNS4 (ENSCCAG00000032978) #32	IGFBP4 (ENSCCAG00000029322) #33	TOP2A (ENSCCAG00000025939) #34	ENSCCAG00000031517	RARA (ENSCCAG00000021724) #35
Bolivian squirrel monkey	MODERN SPECIES	208	ENSSBOG00000024889	ENSSBOG00000028255	ENSSBOG00000031036	ENSSBOG00000026326	KRTAP4-5 (ENSSBOG00000024832)	ENSSBOG00000003071	ENSSBOG00000031693	ENSSBOG00000031937	ENSSBOG00000032989	ENSSBOG00000001195	KRTAP3-1 (ENSSBOG00000021282) #14	KRT40 (ENSSBOG00000033336) #18	KRT39 (ENSSBOG00000023156) #19	KRT23 (ENSSBOG00000029946) #20	KRT20 (ENSSBOG00000020042) #21	KRT12 (ENSSBOG00000020046) #22	KRT10 (ENSSBOG00000034537) #23	KRT28 (ENSSBOG00000033194) #24	KRT26 (ENSSBOG00000031304) #26	KRT24 (ENSSBOG00000020285) #28	KRT222 (ENSSBOG00000035572) #29	SMARCE1 (ENSSBOG00000001180) #30	CCR7 (ENSSBOG00000028714) #31	TNS4 (ENSSBOG00000034575) #32	IGFBP4 (ENSSBOG00000022228) #33	TOP2A (ENSSBOG00000016584) #34	ENSSBOG00000028183	RARA (ENSSBOG00000034538) #35	CDC6 (ENSSBOG00000013277) #36	WIPF2 (ENSSBOG00000029118) #37	RAPGEFL1 (ENSSBOG00000029673)
Marmoset	MODERN SPECIES	17	ENSCJAG00000067750	KRTAP4-12 (ENSCJAG00000069967)	ENSCJAG00000082655 #7	ENSCJAG00000081670 #7	ENSCJAG00000080141 #7	ENSCJAG00000074243 #7	ENSCJAG00000083167	ENSCJAG00000038794	KRTAP3-1 (ENSCJAG00000044200) #14	ENSCJAG00000076427 #16	ENSCJAG00000079566 #16	KRT40 (ENSCJAG00000013706) #18	KRT39 (ENSCJAG00000013697) #19	ENSCJAG00000013664 #24	KRT20 (ENSCJAG00000013679) #21	KRT12 (ENSCJAG00000013609) #22	KRT10 (ENSCJAG00000044765) #23	KRT24 (ENSCJAG00000034830) #28	KRT222 (ENSCJAG00000035627) #29	ENSCJAG00000013573 #30	CCR7 (ENSCJAG00000075739) #31	TNS4 (ENSCJAG00000013560) #32	IGFBP4 (ENSCJAG00000013550) #33	TOP2A (ENSCJAG00000013478) #34	ENSCJAG00000065689	GJD3 (ENSCJAG00000046154)	RARA (ENSCJAG00000013440) #35	CDC6 (ENSCJAG00000011073) #36	ENSCJAG00000081240	ENSCJAG00000031546	TEX14 (ENSCJAG00000073487)
Mas night monkey	MODERN SPECIES	481						KRTAP4-7 (ENSANAG00000028643)	ENSANAG00000033154	ENSANAG00000019385	ENSANAG00000030978 #9	ENSANAG00000031799	KRTAP3-1 (ENSANAG00000014505) #14	KRT40 (ENSANAG00000031905) #18	KRT39 (ENSANAG00000037576) #19	KRT23 (ENSANAG00000033242) #20	KRT20 (ENSANAG00000037651) #21	KRT12 (ENSANAG00000031208) #22	KRT10 (ENSANAG00000032560) #23	KRT28 (ENSANAG00000037757) #24	KRT27 (ENSANAG00000032615) #25	KRT26 (ENSANAG00000022112) #26	KRT25 (ENSANAG00000027137) #27	KRT24 (ENSANAG00000037902) #28	KRT222 (ENSANAG00000023560) #29	ENSANAG00000032353 #30	CCR7 (ENSANAG00000021558) #31	TNS4 (ENSANAG00000036996) #32	IGFBP4 (ENSANAG00000002213) #33	TOP2A (ENSANAG00000025180) #34	ENSANAG00000026269	RARA (ENSANAG00000038222) #35	CDC6 (ENSANAG00000030612) #36
Tarsier	MODERN SPECIES	3915												KRT40 (ENSTSYG00000011333) #18	KRT39 (ENSTSYG00000008675) #19	KRT23 (ENSTSYG00000006431) #20	KRT20 (ENSTSYG00000011001) #21	KRT12 (ENSTSYG00000010990) #22	KRT10 (ENSTSYG00000009031) #23	KRT28 (ENSTSYG00000007469) #24	KRT27 (ENSTSYG00000007457) #25	KRT26 (ENSTSYG00000011414) #26	KRT25 (ENSTSYG00000009548) #27	ENSTSYG00000030238	KRT222 (ENSTSYG00000030456) #29	SMARCE1 (ENSTSYG00000012496) #30	CCR7 (ENSTSYG00000028282) #31
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000156135	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000160295 #9	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163975	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00940000160295 #9	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00940000155258.t	ENSGT00940000154403.a.a	ENSGT00950000183311	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000163444	ENSGT00940000162088	ENSGT00940000153980.i.a	ENSGT00940000163426	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b.d #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Coquerels sifaka	MODERN SPECIES	120	KRTAP29-1 (ENSPCOG00000019509)	ENSPCOG00000013137	ENSPCOG00000022603	ENSPCOG00000017090	ENSPCOG00000026553	ENSPCOG00000014377	ENSPCOG00000021181	ENSPCOG00000014598 #7	ENSPCOG00000012200 #7	ENSPCOG00000015985 #9	ENSPCOG00000004823 #9	KRT40 (ENSPCOG00000017920) #18	KRT39 (ENSPCOG00000024190) #19	KRT23 (ENSPCOG00000015929) #20	KRT20 (ENSPCOG00000019180) #21	KRT12 (ENSPCOG00000013217) #22	ENSPCOG00000023362	KRT10 (ENSPCOG00000018225) #23	KRT28 (ENSPCOG00000025536) #24	KRT27 (ENSPCOG00000023758) #25	KRT26 (ENSPCOG00000025920) #26	KRT25 (ENSPCOG00000016980) #27	KRT24 (ENSPCOG00000018519) #28	KRT222 (ENSPCOG00000027280) #29	ENSPCOG00000013727 #30	CCR7 (ENSPCOG00000016602) #31	TNS4 (ENSPCOG00000024055) #32	IGFBP4 (ENSPCOG00000013262) #33	TOP2A (ENSPCOG00000025407) #34	RARA (ENSPCOG00000024070) #35	CDC6 (ENSPCOG00000027397) #36
Greater bamboo lemur	MODERN SPECIES	1733											ENSPSMG00000010522 #16	KRT40 (ENSPSMG00000010509) #18	KRT39 (ENSPSMG00000010491) #19	KRT23 (ENSPSMG00000010479) #20	KRT20 (ENSPSMG00000010469) #21	KRT12 (ENSPSMG00000010461) #22	KRT10 (ENSPSMG00000010450) #23	KRT28 (ENSPSMG00000010434) #24	KRT27 (ENSPSMG00000010420) #25	ENSPSMG00000010390 #26
Mouse lemur	MODERN SPECIES	7	ENSMICG00000043010	ENSMICG00000034211	ENSMICG00000046956	ENSMICG00000007150	ENSMICG00000046748	ENSMICG00000034773	ENSMICG00000007164	ENSMICG00000046104	KRTAP4-3 (ENSMICG00000007155)	ENSMICG00000047933	ENSMICG00000037682	KRT40 (ENSMICG00000009912) #18	KRT39 (ENSMICG00000009899) #19	KRT23 (ENSMICG00000009894) #20	KRT20 (ENSMICG00000035159) #21	KRT12 (ENSMICG00000009875) #22	KRT10 (ENSMICG00000032358) #23	KRT28 (ENSMICG00000009865) #24	KRT27 (ENSMICG00000009856) #25	KRT26 (ENSMICG00000009852) #26	KRT25 (ENSMICG00000027114) #27	KRT24 (ENSMICG00000009839) #28	KRT222 (ENSMICG00000032628) #29	ENSMICG00000009821 #30	CCR7 (ENSMICG00000028152) #31	TNS4 (ENSMICG00000009811) #32	IGFBP4 (ENSMICG00000009809) #33	TOP2A (ENSMICG00000009772) #34	RARA (ENSMICG00000029502) #35	CDC6 (ENSMICG00000045842) #36	WIPF2 (ENSMICG00000033471) #37
Bushbaby	MODERN SPECIES	133	ENSOGAG00000031966	ENSOGAG00000011446	ENSOGAG00000034704	ENSOGAG00000003105	KRTAP4-5 (ENSOGAG00000003102)	ENSOGAG00000034870	ENSOGAG00000025341	ENSOGAG00000024366	KRTAP3-1 (ENSOGAG00000003088) #14	ENSOGAG00000026860 #16	ENSOGAG00000024415 #16	KRT40 (ENSOGAG00000003085) #18	KRT39 (ENSOGAG00000003083) #19	KRT23 (ENSOGAG00000003082) #20	KRT20 (ENSOGAG00000003079) #21	KRT12 (ENSOGAG00000003076) #22	KRT10 (ENSOGAG00000003075) #23	KRT28 (ENSOGAG00000003074) #24	KRT27 (ENSOGAG00000003073) #25	KRT26 (ENSOGAG00000003070) #26	KRT25 (ENSOGAG00000003068) #27	KRT24 (ENSOGAG00000014264) #28	KRT222 (ENSOGAG00000024213) #29	ENSOGAG00000001652 #30	CCR7 (ENSOGAG00000001650) #31	TNS4 (ENSOGAG00000001646) #32	IGFBP4 (ENSOGAG00000001644) #33	TOP2A (ENSOGAG00000001638) #34	GJD3 (ENSOGAG00000028723)	RARA (ENSOGAG00000024257) #35	CDC6 (ENSOGAG00000008542) #36
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00940000161991	ENSGT00940000153980	ENSGT00940000163658	ENSGT00940000164459	ENSGT00940000156135	ENSGT00940000163931	ENSGT00940000162736 #7	ENSGT00940000155433	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161950 #26	ENSGT00940000161982 #25	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Afrotheria	ANCESTRAL SPECIES	2	ENSGT00940000161787	ENSGT00940000162088	ENSGT00940000161991	ENSGT00940000153980	ENSGT00940000163426	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000163931	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Afrotheria_a	ANCESTRAL SPECIES	2	ENSGT00940000161787	ENSGT00940000162088	ENSGT00940000161991	ENSGT00940000153980	ENSGT00940000163426	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000163931	ENSGT00940000160443	ENSGT00390000001157.A.b #14	ENSGT00390000001157.C #16	ENSGT00940000161968 #18	ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000162192 #24	ENSGT00940000161982 #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Elephant	MODERN SPECIES	310	ENSLAFG00000017176	ENSLAFG00000028624	ENSLAFG00000020912	ENSLAFG00000007437	ENSLAFG00000007429	ENSLAFG00000007428	ENSLAFG00000007424	ENSLAFG00000007421	ENSLAFG00000020659	ENSLAFG00000022004	KRTAP3-1 (ENSLAFG00000026928) #14	ENSLAFG00000007419 #16	KRT40 (ENSLAFG00000007415) #18	KRT39 (ENSLAFG00000007407) #19	KRT23 (ENSLAFG00000006853) #20	KRT12 (ENSLAFG00000015639) #22	KRT10 (ENSLAFG00000011407) #23	KRT28 (ENSLAFG00000022003) #24	KRT27 (ENSLAFG00000006836) #25	KRT25 (ENSLAFG00000006830) #27	KRT24 (ENSLAFG00000000455) #28	KRT222 (ENSLAFG00000020933) #29	SMARCE1 (ENSLAFG00000015555) #30	CCR7 (ENSLAFG00000021527) #31	TNS4 (ENSLAFG00000017735) #32	IGFBP4 (ENSLAFG00000011721) #33	TOP2A (ENSLAFG00000008287) #34	RARA (ENSLAFG00000016234) #35	CDC6 (ENSLAFG00000000608) #36	WIPF2 (ENSLAFG00000011375) #37	ENSLAFG00000031628
Hyrax	MODERN SPECIES	6534													ENSPCAG00000001283 #19	KRT23 (ENSPCAG00000001223) #20	KRT20 (ENSPCAG00000001155) #21	KRT12 (ENSPCAG00000001107) #22
Tenrec	MODERN SPECIES	7767																KRT12 (ENSETEG00000019820) #22
Xenarthra	ANCESTRAL SPECIES	42													ENSGT00940000162203 #19	ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00980000201475	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37	ENSGT00940000160144	ENSGT00390000006930	ENSGT00390000018292
Sloth	MODERN SPECIES	6954															KRT20 (ENSCHOG00000007590) #21	KRT12 (ENSCHOG00000007575) #22
Armadillo	MODERN SPECIES	691												ENSDNOG00000040032 #16	ENSDNOG00000019941 #19	KRT23 (ENSDNOG00000002451) #20	KRT20 (ENSDNOG00000019940) #21	KRT12 (ENSDNOG00000017007) #22	ENSDNOG00000001224 #25	ENSDNOG00000016695 #27	KRT24 (ENSDNOG00000001218) #28	KRT222 (ENSDNOG00000040439) #29	SMARCE1 (ENSDNOG00000007636) #30	ENSDNOG00000042721 #31	TNS4 (ENSDNOG00000031522) #32	IGFBP4 (ENSDNOG00000044382) #33	TOP2A (ENSDNOG00000042715) #34	ENSDNOG00000042346	RARA (ENSDNOG00000046532) #35	WIPF2 (ENSDNOG00000007939) #37	RAPGEFL1 (ENSDNOG00000043103)	CASC3 (ENSDNOG00000017249)	MSL1 (ENSDNOG00000042904)
Marsupialia	ANCESTRAL SPECIES	13														ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000161982.b #25	ENSGT00940000161982.a #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997 #35	ENSGT00530000063498.A #36
Marsupialia_b	ANCESTRAL SPECIES	16														ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849 #23	ENSGT00940000161982.b #25	ENSGT00940000161982.a #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35	ENSGT00530000063498.A #36	ENSGT00940000155557 #37
Diprotodontia	ANCESTRAL SPECIES	9														ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849.k.a #23	ENSGT00940000160849.k.b #23	ENSGT00940000161982.b #25	ENSGT00940000161982.a #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000160849.l #23	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35
Diprotodontia_a	ANCESTRAL SPECIES	11														ENSGT00940000161077 #20	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849.k.a #23	ENSGT00940000160849.k.b #23	ENSGT00940000161982.b #25	ENSGT00940000161982.a #25	ENSGT00940000161950 #26	ENSGT00940000161994 #27	ENSGT00940000161783 #28	ENSGT00940000160849.l #23	ENSGT00940000159655 #29	ENSGT00390000003628.b #30	ENSGT01030000234667.a.a.a.a.b #31	ENSGT00940000160142 #32	ENSGT00940000159647 #33	ENSGT00940000157539 #34	ENSGT00940000159997 #35
koala	MODERN SPECIES	67					ENSPCIG00000034784	ENSPCIG00000004266	ENSPCIG00000025875	ENSPCIG00000025874 #15	ENSPCIG00000025873 #15	ENSPCIG00000032116 #16	ENSPCIG00000036192 #16	KRT40 (ENSPCIG00000025856) #18	ENSPCIG00000025848	KRT23 (ENSPCIG00000025846) #20	KRT20 (ENSPCIG00000025844) #21	KRT12 (ENSPCIG00000025781) #22	ENSPCIG00000012560 #23	ENSPCIG00000012561 #23	ENSPCIG00000012562 #25	ENSPCIG00000012563 #25	KRT26 (ENSPCIG00000025758) #26	KRT25 (ENSPCIG00000025757) #27	ENSPCIG00000025755 #28	KRT24 (ENSPCIG00000025753) #28	KRT222 (ENSPCIG00000025748) #29	SMARCE1 (ENSPCIG00000025742) #30	CCR7 (ENSPCIG00000034639) #31	TNS4 (ENSPCIG00000025729) #32	IGFBP4 (ENSPCIG00000025726) #33	TOP2A (ENSPCIG00000025715) #34	RARA (ENSPCIG00000025697) #35
Common wonbat	MODERN SPECIES	1037			ENSVURG00010004380	ENSVURG00010004485	ENSVURG00010004500	ENSVURG00010004575	ENSVURG00010004590	ENSVURG00010004596 #15	ENSVURG00010004603 #15	ENSVURG00010004613 #16	ENSVURG00010004619 #16	KRT40 (ENSVURG00010004631) #18	ENSVURG00010004646	KRT23 (ENSVURG00010004662) #20	KRT20 (ENSVURG00010004673) #21	KRT12 (ENSVURG00010004697) #22	KRT10 (ENSVURG00010004767) #23	ENSVURG00010004869 #28	KRT24 (ENSVURG00010004908) #28	ENSVURG00010004993 #23	KRT222 (ENSVURG00010005011) #29	SMARCE1 (ENSVURG00010005053) #30	CCR7 (ENSVURG00010005104) #31	TNS4 (ENSVURG00010005120) #32	IGFBP4 (ENSVURG00010005135) #33	TOP2A (ENSVURG00010005155) #34	ENSVURG00010005193 #37	ENSVURG00010005198	RAPGEFL1 (ENSVURG00010005204)	CASC3 (ENSVURG00010005220)	MSL1 (ENSVURG00010005242)
Wallaby	MODERN SPECIES	9354																KRT12 (ENSMEUG00000003605) #22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000020864	ENSSHAG00000029620	ENSSHAG00000029992	ENSSHAG00000020768	ENSSHAG00000030303 #9	ENSSHAG00000032154	ENSSHAG00000029444 #9	ENSSHAG00000004571 #15	ENSSHAG00000020935 #15	ENSSHAG00000025429 #16	ENSSHAG00000032187 #16	KRT40 (ENSSHAG00000005127) #18	ENSSHAG00000005663	KRT23 (ENSSHAG00000022536) #20	KRT20 (ENSSHAG00000007295) #21	KRT12 (ENSSHAG00000007542) #22	KRT10 (ENSSHAG00000008107) #23	ENSSHAG00000002027 #25	ENSSHAG00000008599 #25	KRT26 (ENSSHAG00000008696) #26	KRT25 (ENSSHAG00000008841) #27	ENSSHAG00000022462 #28	KRT24 (ENSSHAG00000009276) #28	ENSSHAG00000009434 #23	KRT222 (ENSSHAG00000009670) #29	SMARCE1 (ENSSHAG00000009907) #30	CCR7 (ENSSHAG00000027409) #31	TNS4 (ENSSHAG00000011346) #32	IGFBP4 (ENSSHAG00000011882) #33	TOP2A (ENSSHAG00000012147) #34	RARA (ENSSHAG00000021631) #35
Opossum	MODERN SPECIES	1	ENSMODG00000041827	ENSMODG00000051411 #7	ENSMODG00000041044 #7	ENSMODG00000042847 #9	ENSMODG00000038095 #9	ENSMODG00000037733 #9	ENSMODG00000024126 #15	ENSMODG00000041424 #15	ENSMODG00000046528 #16	ENSMODG00000041097 #16	KRT40 (ENSMODG00000013596) #18	ENSMODG00000013588	KRT23 (ENSMODG00000013577) #20	ENSMODG00000028173	KRT20 (ENSMODG00000013562) #21	KRT12 (ENSMODG00000013554) #22	ENSMODG00000013548 #23	ENSMODG00000013512 #23	ENSMODG00000013542 #23	ENSMODG00000013455 #25	ENSMODG00000040965 #25	KRT26 (ENSMODG00000013449) #26	KRT25 (ENSMODG00000013441) #27	ENSMODG00000025669 #28	KRT24 (ENSMODG00000013275) #28	ENSMODG00000025707 #23	KRT222 (ENSMODG00000013194) #29	SMARCE1 (ENSMODG00000013191) #30	CCR7 (ENSMODG00000013181) #31	TNS4 (ENSMODG00000013177) #32	ENSMODG00000039152