Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT00940000155433 ENSGT00940000162736 ENSGT00940000160443 ENSGT00940000160295 ENSGT00390000001157.A.b ENSGT00940000162756 ENSGT00730000111539 ENSGT00730000111511 ENSGT00390000001157.A.a ENSGT00390000001157.B ENSGT00390000001157.C ENSGT00940000161968 ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00940000164415 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT01090000260005.a.b.a.a #31 ENSGT00940000159997 #32 Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT00940000154448.b.b.b.b ENSGT00940000159486.ab ENSGT00940000162736 ENSGT00940000155433 ENSGT00940000160443 ENSGT00940000160295 ENSGT00940000162756 ENSGT00730000111539 ENSGT00390000001157.A.a ENSGT00390000001157.B ENSGT00390000001157.C ENSGT00940000161968 ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00940000164415 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT01090000260005.a.b.a.a #31 ENSGT00940000159997 #32 Cetacea ANCESTRAL SPECIES 5 ENSGT00940000161991 #18 ENSGT00940000162088 #19 ENSGT00940000153980.t ##21 ENSGT00940000163841 #20 ENSGT00940000153980.s #21 ENSGT00940000159486.ab ENSGT00940000162736 ENSGT00940000160295 ENSGT00390000001157.A.a ENSGT00390000001157.B ENSGT00390000001157.C ENSGT00940000161968 ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000161950 #23 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT01090000260005.a.b.a.a #31 ENSGT00940000159997 #32 ENSGT00530000063498.A #33 ENSGT00940000155557 #34 ENSGT00940000160144 #35 ENSGT00390000006930 #36 ENSGT00390000018292 #37 Odontoceti ANCESTRAL SPECIES 16 ENSGT00940000155258.t #13 ENSGT00940000154403.a.a #14 ENSGT00940000154403.a.b ##14 ENSGT00940000161311 #16 ENSGT00940000161787 #17 ENSGT00940000161991 #18 ENSGT00940000163841 #20 ENSGT00940000153980.s #21 ENSGT00940000160295 ENSGT00390000001157.A.a ENSGT00390000001157.B ENSGT00390000001157.C ENSGT00940000161968 ENSGT00940000162088 #19 ENSGT00940000153980.t ##21 ENSGT00940000159382 #22 ENSGT00940000161950 #23 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT01090000260005.a.b.a.a #31 ENSGT00940000159997 #32 ENSGT00530000063498.A #33 ENSGT00940000155557 #34 ENSGT00940000160144 #35 ENSGT00390000006930 #36 ENSGT00390000018292 #37 Odontoceti_a ANCESTRAL SPECIES 14 ENSGT00390000015789.c.a.b #8 ENSGT00940000163247 #9 ENSGT00940000160681.C #10 ENSGT00940000154602.b #11 ENSGT00940000154602.a ##11 ENSGT00940000155258.t #13 ENSGT00940000154403.a.a #14 ENSGT00940000154403.a.b ##14 ENSGT00940000161311 #16 ENSGT00940000161787 #17 ENSGT00940000161991 #18 ENSGT00940000162088 #19 ENSGT00940000153980.t ##21 ENSGT00940000163841 #20 ENSGT00940000153980.s #21 ENSGT00940000159382 #22 ENSGT00940000161950 #23 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT01090000260005.a.b.a.a #31 ENSGT00940000159997 #32 ENSGT00530000063498.A #33 ENSGT00940000155557 #34 ENSGT00940000160144 #35 ENSGT00390000006930 #36 ENSGT00390000018292 #37 Odontoceti_b ANCESTRAL SPECIES 16 ENSGT00940000163247 #9 ENSGT00940000154602.b #11 ENSGT00940000160681.C #10 ENSGT00940000154602.a ##11 ENSGT00940000155258.t #13 ENSGT00940000154403.a.a #14 ENSGT00940000154403.a.b ##14 ENSGT00950000183311 #15 ENSGT00940000161311 #16 ENSGT00940000161787 #17 ENSGT00940000161991 #18 ENSGT00940000162088 #19 ENSGT00940000153980.t ##21 ENSGT00940000163841 #20 ENSGT00940000153980.s #21 ENSGT00940000159382 #22 ENSGT00940000161950 #23 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT01090000260005.a.b.a.a #31 ENSGT00940000159997 #32 ENSGT00530000063498.A #33 ENSGT00940000155557 #34 ENSGT00940000160144 #35 ENSGT00390000006930 #36 ENSGT00390000018292 #37 Monodontidae ANCESTRAL SPECIES 16 ENSGT00390000014792 #7 ENSGT00390000015789.c.a.b #8 ENSGT00940000163247 #9 ENSGT00940000154602.b #11 ENSGT00940000160681.C #10 ENSGT00940000155258.t #13 ENSGT00940000154403.a.a #14 ENSGT00940000154403.a.b ##14 ENSGT00950000183311 #15 ENSGT00940000161311 #16 ENSGT00940000161787 #17 ENSGT00940000161991 #18 ENSGT00940000162088 #19 ENSGT00940000163841 #20 ENSGT00940000153980.s #21 ENSGT00940000159382 #22 ENSGT00940000161950 #23 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT01090000260005.a.b.a.a #31 ENSGT00940000159997 #32 ENSGT00530000063498.A #33 ENSGT00940000155557 #34 ENSGT00940000160144 #35 ENSGT00390000006930 #36 ENSGT00390000018292 #37 Narwhal MODERN SPECIES 316 GAST (ENSMMNG00015017208) #7 EIF1 (ENSMMNG00015017110) #8 ENSMMNG00015017066 #9 ENSMMNG00015017022 #10 KRT16 (ENSMMNG00015016975) #11 ENSMMNG00015016841 #12 KRT19 (ENSMMNG00015016751) #13 KRT15 (ENSMMNG00015016652) #14 KRT13 (ENSMMNG00015016552) #15 KRT36 (ENSMMNG00015016489) #16 KRT35 (ENSMMNG00015016167) #17 KRT32 (ENSMMNG00015016021) #18 ENSMMNG00015015975 #19 ENSMMNG00015020884 #20 ENSMMNG00015020870 #21 KRT12 (ENSMMNG00015020854) #22 ENSMMNG00015020836 #23 KRT24 (ENSMMNG00015020814) #24 KRT222 (ENSMMNG00015020791) #25 ENSMMNG00015020648 #26 CCR7 (ENSMMNG00015020594) #27 TNS4 (ENSMMNG00015020571) #28 IGFBP4 (ENSMMNG00015020546) #29 TOP2A (ENSMMNG00015020530) #30 GJD3 (ENSMMNG00015020507) #31 RARA (ENSMMNG00015020465) #32 CDC6 (ENSMMNG00015020434) #33 WIPF2 (ENSMMNG00015020404) #34 RAPGEFL1 (ENSMMNG00015020323) #35 CASC3 (ENSMMNG00015020273) #36 MSL1 (ENSMMNG00015020237) #37 Beluga whale MODERN SPECIES 26 P3H4 (ENSDLEG00000010296) JUP (ENSDLEG00000010325) HAP1 (ENSDLEG00000010394) GAST (ENSDLEG00000010409) #7 EIF1 (ENSDLEG00000010424) #8 ENSDLEG00000010442 #9 KRT36 (ENSDLEG00000010471) #10 ENSDLEG00000010541 #11 ENSDLEG00000010559 ##14 KRT15 (ENSDLEG00000010588) #14 ENSDLEG00000010656 ##14 KRT35 (ENSDLEG00000010700) #17 KRT32 (ENSDLEG00000011003) #18 ENSDLEG00000011512 #19 KRT33A (ENSDLEG00000011528) ##21 KRT12 (ENSDLEG00000011548) #22 KRT24 (ENSDLEG00000011564) #24 KRT222 (ENSDLEG00000011592) #25 SMARCE1 (ENSDLEG00000011604) #26 CCR7 (ENSDLEG00000011618) #27 TNS4 (ENSDLEG00000011633) #28 IGFBP4 (ENSDLEG00000011662) #29 TOP2A (ENSDLEG00000011757) #30 GJD3 (ENSDLEG00000013297) #31 RARA (ENSDLEG00000013307) #32 CDC6 (ENSDLEG00000013333) #33 WIPF2 (ENSDLEG00000013388) #34 RAPGEFL1 (ENSDLEG00000013410) #35 CASC3 (ENSDLEG00000013448) #36 MSL1 (ENSDLEG00000013463) #37 NR1D1 (ENSDLEG00000013483) Vaquita MODERN SPECIES 12 HAP1 (ENSPSNG00000013642) GAST (ENSPSNG00000013554) #7 ENSPSNG00000013484 ##8 ENSPSNG00000013387 #9 KRT17 (ENSPSNG00000013207) #10 ENSPSNG00000013136 KRT14 (ENSPSNG00000013111) ##11 KRT19 (ENSPSNG00000013067) #13 KRT15 (ENSPSNG00000012869) #14 KRT13 (ENSPSNG00000012628) #15 KRT36 (ENSPSNG00000012532) #16 KRT35 (ENSPSNG00000012426) #17 ENSPSNG00000012074 #19 ENSPSNG00000011974 #20 ENSPSNG00000011948 KRT12 (ENSPSNG00000011850) #22 KRT222 (ENSPSNG00000011342) #25 ENSPSNG00000011023 #26 CCR7 (ENSPSNG00000010907) #27 TNS4 (ENSPSNG00000010768) #28 IGFBP4 (ENSPSNG00000010715) #29 TOP2A (ENSPSNG00000010629) #30 RARA (ENSPSNG00000010408) #32 CDC6 (ENSPSNG00000010325) #33 RAPGEFL1 (ENSPSNG00000009921) #35 CASC3 (ENSPSNG00000009773) #36 MSL1 (ENSPSNG00000009592) #37 NR1D1 (ENSPSNG00000009539) THRA (ENSPSNG00000009491) MED24 (ENSPSNG00000009228) CSF3 (ENSPSNG00000008991) Dolphin MODERN SPECIES 4094 KRT12 (ENSTTRG00000003254) #22 Sperm whale MODERN SPECIES 5 ENSPCTG00005013413 #9 ENSPCTG00005013296 #11 KRT14 (ENSPCTG00005013034) ##11 KRT19 (ENSPCTG00005012929) #13 KRT15 (ENSPCTG00005012795) #14 KRT13 (ENSPCTG00005012719) ##14 KRT36 (ENSPCTG00005012640) #16 KRT32 (ENSPCTG00005012144) #18 ENSPCTG00005011986 #20 ENSPCTG00005011593 ENSPCTG00005011457 ENSPCTG00005011439 ENSPCTG00005011402 ENSPCTG00005011382 KRT40 (ENSPCTG00005011311) KRT12 (ENSPCTG00005011232) #22 ENSPCTG00005011172 #24 KRT222 (ENSPCTG00005011101) #25 SMARCE1 (ENSPCTG00005010790) #26 CCR7 (ENSPCTG00005010723) #27 TNS4 (ENSPCTG00005010657) #28 TOP2A (ENSPCTG00005010563) #30 WIPF2 (ENSPCTG00005010469) #34 MSL1 (ENSPCTG00005010403) #37 CASC3 (ENSPCTG00005010303) #36 PSMD3 (ENSPCTG00005010192) LRRC3C (ENSPCTG00005010173) ORMDL3 (ENSPCTG00005010109) ZPBP2 (ENSPCTG00005010055) IKZF3 (ENSPCTG00005008014) GRB7 (ENSPCTG00005007782) Blue whale MODERN SPECIES 12 ENSBMSG00010017828 #21 ENSBMSG00010017779 ENSBMSG00010017768 ENSBMSG00010017743 ENSBMSG00010017722 ENSBMSG00010017711 ENSBMSG00010017700 ENSBMSG00010017678 ENSBMSG00010017663 ENSBMSG00010017650 ENSBMSG00010017624 KRT39 (ENSBMSG00010015952) KRT23 (ENSBMSG00010015818) ENSBMSG00010015791 KRT20 (ENSBMSG00010015759) KRT12 (ENSBMSG00010015720) #22 KRT24 (ENSBMSG00010015682) #24 KRT222 (ENSBMSG00010015655) #25 ENSBMSG00010015441 #26 CCR7 (ENSBMSG00010015376) #27 TNS4 (ENSBMSG00010015347) #28 IGFBP4 (ENSBMSG00010015319) #29 TOP2A (ENSBMSG00010015282) #30 RARA (ENSBMSG00010015127) #32 CDC6 (ENSBMSG00010015096) #33 WIPF2 (ENSBMSG00010015049) #34 RAPGEFL1 (ENSBMSG00010015020) #35 CASC3 (ENSBMSG00010014953) #36 MSL1 (ENSBMSG00010014889) #37 ENSBMSG00010014868 NR1D1 (ENSBMSG00010014854) Pecora ANCESTRAL SPECIES 1 ENSGT00940000159486.`b.a.a.a.a ENSGT00940000162736 ENSGT00940000155433 ENSGT00940000160295.u ENSGT00940000160443 ENSGT00940000160295.v ENSGT00940000162756 ENSGT00730000111539 ENSGT00390000001157.A.a ENSGT00390000001157.B ENSGT00390000001157.C.jc ENSGT00940000161968 ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00940000164415 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT00940000159997 #32 ENSGT00530000063498.A #33 Yarkand deer MODERN SPECIES 28 ENSCHYG00000006258 ENSCHYG00000006250 ENSCHYG00000006103 ENSCHYG00000006077 ENSCHYG00000006067 ENSCHYG00000006053 ENSCHYG00000006043 ENSCHYG00000006037 ENSCHYG00000006022 ENSCHYG00000006013 ENSCHYG00000004486 KRT40 (ENSCHYG00000004477) KRT39 (ENSCHYG00000004465) KRT23 (ENSCHYG00000004447) KRT20 (ENSCHYG00000004429) KRT12 (ENSCHYG00000004408) #22 KRT10 (ENSCHYG00000004393) KRT28 (ENSCHYG00000004357) KRT27 (ENSCHYG00000004325) KRT26 (ENSCHYG00000004300) #23 KRT25 (ENSCHYG00000004269) KRT24 (ENSCHYG00000004238) #24 KRT222 (ENSCHYG00000004215) #25 SMARCE1 (ENSCHYG00000004192) #26 CCR7 (ENSCHYG00000004168) #27 TNS4 (ENSCHYG00000004150) #28 IGFBP4 (ENSCHYG00000004135) #29 TOP2A (ENSCHYG00000004090) #30 RARA (ENSCHYG00000003992) #32 CDC6 (ENSCHYG00000003946) #33 WIPF2 (ENSCHYG00000003920) #34 Percora_a ANCESTRAL SPECIES 2 ENSGT00940000155258.t #13 ENSGT00940000154403.a.a #14 ENSGT00940000154403.a.b ##14 ENSGT00940000161311 #16 ENSGT00940000161787 #17 ENSGT00940000161991 #18 ENSGT00940000162088.h #19 ENSGT00940000162088.g #19 ENSGT00940000153980.q #21 ENSGT00390000001157.B ENSGT00390000001157.C.jc ENSGT00940000161968 ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00940000164415 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT00940000159997 #32 ENSGT00530000063498.A #33 Siberian musk deer MODERN SPECIES 1210 ENSMMSG00000013897 ENSMMSG00000013853 ENSMMSG00000023929 ENSMMSG00000023925 ENSMMSG00000023922 ENSMMSG00000023920 ENSMMSG00000023916 ENSMMSG00000023913 ENSMMSG00000023911 ENSMMSG00000023909 ENSMMSG00000023903 KRT40 (ENSMMSG00000023897) KRT39 (ENSMMSG00000023878) KRT23 (ENSMMSG00000023863) KRT20 (ENSMMSG00000023852) KRT12 (ENSMMSG00000023847) #22 KRT10 (ENSMMSG00000023842) KRT28 (ENSMMSG00000023835) KRT27 (ENSMMSG00000023828) KRT26 (ENSMMSG00000023818) #23 KRT25 (ENSMMSG00000023811) KRT24 (ENSMMSG00000023804) #24 KRT222 (ENSMMSG00000023799) #25 ENSMMSG00000023764 #26 CCR7 (ENSMMSG00000023753) #27 TNS4 (ENSMMSG00000023734) #28 IGFBP4 (ENSMMSG00000023725) #29 TOP2A (ENSMMSG00000023680) #30 RARA (ENSMMSG00000023636) #32 CDC6 (ENSMMSG00000023611) #33 WIPF2 (ENSMMSG00000023597) #34 Bovidae ANCESTRAL SPECIES 2 ENSGT00940000154403.a.b ##14 ENSGT00940000161311 #16 ENSGT00940000161787 #17 ENSGT00940000161991 #18 ENSGT00940000162088.h #19 ENSGT00940000162088.g #19 ENSGT00940000153980.q.b #21 ENSGT00940000163426 ENSGT00940000153980.q.a #21 ENSGT00390000001157.B ENSGT00390000001157.C.jc ENSGT00940000161968 ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00940000164415 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT00940000154268.e.b.a ENSGT01090000260005.a.b.a.a #31 Bovinae ANCESTRAL SPECIES ENSGT00940000159486.`b.a.a.b.b ENSGT00940000155433 ENSGT00940000162736.i ENSGT00940000160443.c.b ENSGT00940000160443.c.a ENSGT00940000160295.u ENSGT00940000160443.d ENSGT00940000160295.v ENSGT00390000001157.B ENSGT00390000001157.C.jc ENSGT00940000161968 ENSGT01050000244940.a.a.bb.a ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00940000164415 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT00940000154268.e.b.a ENSGT01090000260005.a.b.a.a #31 Bos ANCESTRAL SPECIES 1 ENSGT00940000159486.`b.a.a.b.b.c.a.b ENSGT00940000155433 ENSGT00940000160295.u ENSGT00940000162736.i ENSGT00940000160443.c.b ENSGT00940000160443.c.a ENSGT00940000160443.d ENSGT00940000160295.v ENSGT00390000001157.C.jc.j ENSGT00390000001157.C.jc.i.a ENSGT00940000161968 ENSGT01050000244940.a.a.bb.a ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT00940000154268.e.b.a ENSGT01090000260005.a.b.a.a #31 ENSGT00940000159997 #32 Bos_a ANCESTRAL SPECIES ENSGT00940000159486.`b.a.a.b.b.c.b ENSGT00940000159486.`b.a.a.b.b.d ENSGT00940000162736.i.b ENSGT00940000160443.c.b ENSGT00940000160443.c.a ENSGT00940000160443.d ENSGT00940000160295.v ENSGT00390000001157.B ENSGT00390000001157.C.jc.i.b ENSGT00390000001157.C.jc.i.a ENSGT00940000161968 ENSGT01050000244940.a.a.bb.a ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT00940000154268.e.b.a ENSGT01090000260005.a.b.a.a #31 ENSGT00940000159997 #32 Domestic yak MODERN SPECIES 10 ENSBGRG00000014915 ENSBGRG00000014928 ENSBGRG00000015034 ENSBGRG00000015061 ENSBGRG00000015074 ENSBGRG00000015111 ENSBGRG00000015136 KAP3-1 (ENSBGRG00000015154) ENSBGRG00000015181 ENSBGRG00000015228 KAP3.3 (ENSBGRG00000015266) KRT40 (ENSBGRG00000015292) KRT39 (ENSBGRG00000015379) KRT23 (ENSBGRG00000015492) KRT20 (ENSBGRG00000016100) KRT12 (ENSBGRG00000016211) #22 KRT10 (ENSBGRG00000016347) KRT28 (ENSBGRG00000016455) KRT27 (ENSBGRG00000016581) KRT26 (ENSBGRG00000016662) #23 KRT25 (ENSBGRG00000016734) KRT24 (ENSBGRG00000016783) #24 KRT222 (ENSBGRG00000016889) #25 SMARCE1 (ENSBGRG00000016928) #26 CCR7 (ENSBGRG00000017039) #27 TNS4 (ENSBGRG00000017101) #28 IGFBP4 (ENSBGRG00000017437) #29 TOP2A (ENSBGRG00000017633) #30 ENSBGRG00000019354 ENSBGRG00000019366 #31 RARA (ENSBGRG00000019399) #32 Wild yak MODERN SPECIES 1109 ENSBMUG00000007308 ENSBMUG00000007315 ENSBMUG00000007321 ENSBMUG00000007333 ENSBMUG00000007360 ENSBMUG00000007379 ENSBMUG00000007389 ENSBMUG00000007393 ENSBMUG00000007396 ENSBMUG00000007403 KRT40 (ENSBMUG00000007416) ENSBMUG00000007422 KRT39 (ENSBMUG00000007430) KRT23 (ENSBMUG00000007436) KRT20 (ENSBMUG00000007456) KRT12 (ENSBMUG00000007467) #22 KRT10 (ENSBMUG00000007473) KRT28 (ENSBMUG00000007482) KRT27 (ENSBMUG00000007494) KRT26 (ENSBMUG00000007503) #23 ENSBMUG00000007508 Bos_b ANCESTRAL SPECIES 15 ENSGT00940000159486.`b.a.a.b.b.c.a.a.b.a ENSGT00940000155433.i.b ENSGT00940000155433.i.a ENSGT00940000162736.i ENSGT00940000160443.c.b ENSGT00940000160443.c.a ENSGT00940000160443.d ENSGT00940000160295.v ENSGT00390000001157.C.jc.j ENSGT00390000001157.B ENSGT00390000001157.C.jc.i.a ENSGT00940000161968 ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT00940000154268.e.b.a ENSGT00940000159997 #32 ENSGT00530000063498.A #33 Cow MODERN SPECIES 10 ENSBTAG00000039644 ENSBTAG00000037665 ENSBTAG00000038759 ENSBTAG00000049202 KRTAP1-1 (ENSBTAG00000030559) ENSBTAG00000024995 ENSBTAG00000050460 KRTAP3-1 (ENSBTAG00000052919) ENSBTAG00000054542 ENSBTAG00000054092 KRTAP3-3 (ENSBTAG00000054927) KRT40 (ENSBTAG00000017408) KRT39 (ENSBTAG00000020078) KRT23 (ENSBTAG00000040460) KRT20 (ENSBTAG00000007794) KRT12 (ENSBTAG00000015518) #22 KRT10 (ENSBTAG00000020824) KRT28 (ENSBTAG00000030555) KRT27 (ENSBTAG00000030548) KRT26 (ENSBTAG00000030546) #23 KRT25 (ENSBTAG00000030542) KRT24 (ENSBTAG00000040279) #24 KRT222 (ENSBTAG00000030539) #25 SMARCE1 (ENSBTAG00000015308) #26 CCR7 (ENSBTAG00000015133) #27 TNS4 (ENSBTAG00000007958) #28 IGFBP4 (ENSBTAG00000008611) #29 TOP2A (ENSBTAG00000019262) #30 ENSBTAG00000052844 RARA (ENSBTAG00000012500) #32 CDC6 (ENSBTAG00000010384) #33 Hybrid Bos Indicus MODERN SPECIES 10 ENSBIXG00005031344 ENSBIXG00005031342 ENSBIXG00005031341 ENSBIXG00005031339 ENSBIXG00005031336 ENSBIXG00005031334 ENSBIXG00005031333 ENSBIXG00005031332 ENSBIXG00005031331 ENSBIXG00005031330 ENSBIXG00005031329 KRT40 (ENSBIXG00005031328) KRT39 (ENSBIXG00005031324) KRT23 (ENSBIXG00005031323) KRT20 (ENSBIXG00005031321) KRT12 (ENSBIXG00005031316) #22 KRT26 (ENSBIXG00005031310) #23 KRT28 (ENSBIXG00005031306) KRT24 (ENSBIXG00005031302) #24 KRT222 (ENSBIXG00005031299) #25 SMARCE1 (ENSBIXG00005031296) #26 CCR7 (ENSBIXG00005031295) #27 TNS4 (ENSBIXG00005031291) #28 IGFBP4 (ENSBIXG00005031288) #29 TOP2A (ENSBIXG00005031281) #30 ENSBIXG00005031277 RARA (ENSBIXG00005031268) #32 CDC6 (ENSBIXG00005031258) #33 WIPF2 (ENSBIXG00005031247) #34 RAPGEFL1 (ENSBIXG00005031234) #35 CASC3 (ENSBIXG00005031226) #36 American bison MODERN SPECIES 3101 ENSBBBG00000010127 ENSBBBG00000010122 ENSBBBG00000010119 ENSBBBG00000010115 ENSBBBG00000010112 ENSBBBG00000006688 ENSBBBG00000025245 ENSBBBG00000025241 ENSBBBG00000008086 ENSBBBG00000025235 KRT40 (ENSBBBG00000025230) ENSBBBG00000025197 KRT39 (ENSBBBG00000006669) KRT23 (ENSBBBG00000025161) KRT20 (ENSBBBG00000025144) KRT12 (ENSBBBG00000025119) #22 KRT10 (ENSBBBG00000006646) KRT28 (ENSBBBG00000007843) KRT27 (ENSBBBG00000025042) KRT26 (ENSBBBG00000006612) #23 KRT25 (ENSBBBG00000025011) KRT24 (ENSBBBG00000024991) #24 KRT222 (ENSBBBG00000024971) #25 ENSBBBG00000007827 SMARCE1 (ENSBBBG00000024947) #26 CCR7 (ENSBBBG00000024903) #27 TNS4 (ENSBBBG00000024883) #28 IGFBP4 (ENSBBBG00000024848) #29 TOP2A (ENSBBBG00000024833) #30 ENSBBBG00000007723 RARA (ENSBBBG00000024732) #32 Caprinae ANCESTRAL SPECIES 1 ENSGT00940000163416.p.a.b ENSGT00940000159486.`b.a.a.b.b.a ENSGT00940000159486.`b.a.a.b.b.b ENSGT00940000162736.l ENSGT00940000162736.k ENSGT00940000160295.u ENSGT00940000160443 ENSGT00940000160295.v ENSGT00390000001157.A.a ENSGT00390000001157.B ENSGT00390000001157.C.jc ENSGT00940000161968 ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT00940000154268.e.b.a ENSGT00940000159997 #32 ENSGT00530000063498.A #33 Rambouillet Sheep MODERN SPECIES 2 ENSOARG00020006213 ENSOARG00020006222 ENSOARG00020006235 ENSOARG00020006246 KRTAP1-1 (ENSOARG00020006263) KRTAP1-3 (ENSOARG00020006325) KAP3.2 (ENSOARG00020006425) ENSOARG00020006438 ENSOARG00020006457 BIIIB4 (ENSOARG00020006476) KRT40 (ENSOARG00020006496) ENSOARG00020006570 KRT39 (ENSOARG00020006647) KRT23 (ENSOARG00020006727) KRT20 (ENSOARG00020006793) KRT12 (ENSOARG00020006858) #22 KRT10 (ENSOARG00020006954) KRT28 (ENSOARG00020007049) KRT27 (ENSOARG00020007155) KRT26 (ENSOARG00020007244) #23 KRT25 (ENSOARG00020007286) KRT24 (ENSOARG00020007351) #24 KRT222 (ENSOARG00020007428) #25 SMARCE1 (ENSOARG00020007516) #26 CCR7 (ENSOARG00020007720) #27 TNS4 (ENSOARG00020007745) #28 IGFBP4 (ENSOARG00020007791) #29 TOP2A (ENSOARG00020007860) #30 RARA (ENSOARG00020008581) #32 CDC6 (ENSOARG00020008853) #33 WIPF2 (ENSOARG00020008893) #34 Goat MODERN SPECIES 10 ENSCHIG00000008757 ENSCHIG00000006463 ENSCHIG00000007577 ENSCHIG00000026924 ENSCHIG00000014439 ENSCHIG00000023678 ENSCHIG00000016488 ENSCHIG00000022685 KRTAP3-1 (ENSCHIG00000001659) ENSCHIG00000024894 ENSCHIG00000004564 KRT40 (ENSCHIG00000024829) KRT39 (ENSCHIG00000017306) KRT23 (ENSCHIG00000013100) KRT20 (ENSCHIG00000013291) KRT12 (ENSCHIG00000018097) #22 KRT10 (ENSCHIG00000025099) KRT28 (ENSCHIG00000015839) KRT27 (ENSCHIG00000024470) KRT26 (ENSCHIG00000011943) #23 KRT25 (ENSCHIG00000015383) KRT24 (ENSCHIG00000012661) #24 KRT222 (ENSCHIG00000023613) #25 SMARCE1 (ENSCHIG00000012322) #26 CCR7 (ENSCHIG00000019145) #27 TNS4 (ENSCHIG00000026674) #28 IGFBP4 (ENSCHIG00000014813) #29 TOP2A (ENSCHIG00000012498) #30 ENSCHIG00000003132 RARA (ENSCHIG00000014719) #32 CDC6 (ENSCHIG00000009302) #33 Camelidae ANCESTRAL SPECIES 60 ENSGT00940000159486.ab.a.a.a ENSGT00940000162736 ENSGT00940000160295.t ENSGT00390000001157.A.b ENSGT00390000001157.B ENSGT00390000001157.C ENSGT00940000161968 ENSGT00940000162203 ENSGT00940000161077 ENSGT00940000161855 ENSGT00940000159382 #22 ENSGT00940000160849 ENSGT00940000162192 ENSGT00940000161982 ENSGT00940000161950 #23 ENSGT00940000161994 ENSGT00940000161783 #24 ENSGT00940000159655 #25 ENSGT00390000003628.b #26 ENSGT01030000234667.a.a.a.a.b #27 ENSGT00940000160142 #28 ENSGT00940000159647 #29 ENSGT00940000157539 #30 ENSGT00940000159997 #32 ENSGT00530000063498.A #33 ENSGT00940000155557 #34 Arabian camel MODERN SPECIES 7 ENSCDRG00005008781 ENSCDRG00005008758 ENSCDRG00005008736 ENSCDRG00005008718 ENSCDRG00005008703 ENSCDRG00005008691 ENSCDRG00005008658 KRTAP3-1 (ENSCDRG00005008632) ENSCDRG00005008593 ENSCDRG00005008570 ENSCDRG00005008551 KRT40 (ENSCDRG00005008540) KRT39 (ENSCDRG00005008468) KRT23 (ENSCDRG00005008329) KRT20 (ENSCDRG00005008233) KRT12 (ENSCDRG00005008188) #22 KRT10 (ENSCDRG00005008151) KRT28 (ENSCDRG00005008097) KRT27 (ENSCDRG00005008025) KRT26 (ENSCDRG00005007950) #23 KRT25 (ENSCDRG00005007856) KRT24 (ENSCDRG00005007765) #24 KRT222 (ENSCDRG00005007721) #25 SMARCE1 (ENSCDRG00005007508) #26 CCR7 (ENSCDRG00005007460) #27 TNS4 (ENSCDRG00005007372) #28 IGFBP4 (ENSCDRG00005007330) #29 TOP2A (ENSCDRG00005007292) #30 RARA (ENSCDRG00005007055) #32 CDC6 (ENSCDRG00005006919) #33 WIPF2 (ENSCDRG00005006814) #34 Alpaca DUPLICATION Alpaca MODERN SPECIES 2122 ENSVPAG00000000998 ENSVPAG00000015470 ENSVPAG00000015521 KRTAP3-1 (ENSVPAG00000000997) ENSVPAG00000000996 ENSVPAG00000000995 KRT40 (ENSVPAG00000000994) KRT23 (ENSVPAG00000000993) ENSVPAG00000000990 KRT12 (ENSVPAG00000000988) #22 KRT10 (ENSVPAG00000000987) KRT28 (ENSVPAG00000000986) KRT27 (ENSVPAG00000000985) KRT26 (ENSVPAG00000000983) #23 KRT25 (ENSVPAG00000000982) ENSVPAG00000000981 #22 KRT222 (ENSVPAG00000000980) #25 SMARCE1 (ENSVPAG00000000979) #26 Alpaca MODERN SPECIES 2122 ENSVPAG00000000998 ENSVPAG00000015470 ENSVPAG00000015521 KRTAP3-1 (ENSVPAG00000000997) ENSVPAG00000000996 ENSVPAG00000000995 KRT40 (ENSVPAG00000000994) KRT23 (ENSVPAG00000000993) ENSVPAG00000000990 KRT12 (ENSVPAG00000000988) #22 KRT10 (ENSVPAG00000000987) KRT28 (ENSVPAG00000000986) KRT27 (ENSVPAG00000000985) KRT26 (ENSVPAG00000000983) #23 KRT25 (ENSVPAG00000000982) ENSVPAG00000000981 #22 KRT222 (ENSVPAG00000000980) #25 SMARCE1 (ENSVPAG00000000979) #26