Sarcopterygii ANCESTRAL SPECIES ENSGT00940000159382 #22 Tetrapoda ANCESTRAL SPECIES 21 ENSGT00390000012959.a ENSGT00940000156331 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT00390000014792 ENSGT00390000015789.c ENSGT00950000182969.B.c.a.a.c ENSGT00940000155258 ENSGT00940000154403 ENSGT00950000183311 ENSGT00940000161311 ENSGT00940000161077 #20 ENSGT00950000182969.B.d ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Amniota ANCESTRAL SPECIES 14 ENSGT00390000012959.a ENSGT00940000156331 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT00390000014792 ENSGT00390000015789.c ENSGT00950000182969.B.c.a.a.c ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000154403.a.a ENSGT00950000183311 ENSGT00940000161311 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 Mammalia ANCESTRAL SPECIES 12 ENSGT00940000162088 ENSGT00940000153980 ENSGT00940000163841 ENSGT00940000154403.a.a ENSGT00950000183311 ENSGT00940000161311 ENSGT00940000156135 ENSGT00940000159486 ENSGT00940000163931 ENSGT00940000160295 #13 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000161994 #27 ENSGT00940000161950 #26 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 Theria ANCESTRAL SPECIES 9 ENSGT00940000162088 ENSGT00940000163841 ENSGT00940000153980 ENSGT00950000183407 ENSGT00940000159486 ENSGT00940000163931 ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Eutheria ANCESTRAL SPECIES 4 ENSGT00940000156135 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163931 ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Boreoeutheria ANCESTRAL SPECIES 4 ENSGT01100000265611 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Laurasiatheria ANCESTRAL SPECIES 4 ENSGT01100000265611 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Laurasiatheria_a ANCESTRAL SPECIES 4 ENSGT00940000164263 ENSGT00940000163931 ENSGT00940000159486 ENSGT00940000154448.b.b.b.b ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Laurasiatheria_b ANCESTRAL SPECIES 4 ENSGT00940000159486 ENSGT00940000154448.b.b.b.b ENSGT00940000164263 ENSGT00940000163931 ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Carnivora ANCESTRAL SPECIES 9 ENSGT00940000153980.x ENSGT00940000163931 ENSGT00940000159486.hb ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Caniformia ANCESTRAL SPECIES 6 ENSGT00940000161991 ENSGT00940000163444 ENSGT00940000162088 ENSGT00940000153980.x ENSGT00940000159486.gb.b ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Canidae ANCESTRAL SPECIES 2 ENSGT00940000163416 ENSGT00940000159486.gb.b ENSGT00940000155433.p #8 ENSGT00940000162736 ENSGT00940000155433.o #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C.`d #16 ENSGT00390000001157.C.ad #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415.b #30 ENSGT00390000003628.b.o #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Canis_lupus ANCESTRAL SPECIES 3 ENSGT00940000155433.p.d.a #8 ENSGT00940000162736 ENSGT00940000155433.o #9 ENSGT00940000160295.n #10 ENSGT00940000160295.m.a #11 ENSGT00940000160295.m.b.a #12 ENSGT00940000160295.m.b.b #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C.`d #16 ENSGT00390000001157.C.ad #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415.b #30 ENSGT00390000003628.b.o #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Dingo MODERN SPECIES 150 ENSCAFG00020018535 #7 ENSCAFG00020018539 #8 ENSCAFG00020018541 #9 ENSCAFG00020018544 #10 ENSCAFG00020018546 #11 ENSCAFG00020018547 #12 ENSCAFG00020018549 #13 KRTAP3-1 (ENSCAFG00020018551) #14 ENSCAFG00020018552 #15 ENSCAFG00020018554 #16 ENSCAFG00020018555 #17 KRT40 (ENSCAFG00020018558) #18 KRT39 (ENSCAFG00020018562) #19 KRT23 (ENSCAFG00020018572) #20 KRT20 (ENSCAFG00020018575) #21 KRT12 (ENSCAFG00020018578) #22 KRT10 (ENSCAFG00020018583) #23 KRT28 (ENSCAFG00020018588) #24 KRT27 (ENSCAFG00020018596) #25 KRT26 (ENSCAFG00020018606) #26 KRT25 (ENSCAFG00020018610) #27 KRT24 (ENSCAFG00020018616) #28 KRT222 (ENSCAFG00020018618) #29 ENSCAFG00020018619 #30 SMARCE1 (ENSCAFG00020018621) #31 CCR7 (ENSCAFG00020018629) #32 TNS4 (ENSCAFG00020018638) #33 TOP2A (ENSCAFG00020018681) #34 ENSCAFG00020018725 #35 RARA (ENSCAFG00020018727) #36 CDC6 (ENSCAFG00020018729) #37 Dog MODERN SPECIES 37 ENSCAFG00845013400 ENSCAFG00845013413 #8 ENSCAFG00845013424 ENSCAFG00845013437 #10 ENSCAFG00845013453 #11 ENSCAFG00845013469 #12 ENSCAFG00845013488 #13 KRTAP3-1 (ENSCAFG00845013500) #14 ENSCAFG00845013514 #15 ENSCAFG00845013535 #16 ENSCAFG00845013549 #17 KRT40 (ENSCAFG00845013567) #18 KRT39 (ENSCAFG00845013600) #19 KRT23 (ENSCAFG00845013633) #20 KRT20 (ENSCAFG00845013676) #21 KRT12 (ENSCAFG00845013703) #22 KRT10 (ENSCAFG00845013739) #23 KRT28 (ENSCAFG00845007176) #24 KRT27 (ENSCAFG00845007233) #25 KRT26 (ENSCAFG00845007297) #26 KRT25 (ENSCAFG00845007356) #27 KRT24 (ENSCAFG00845007445) #28 KRT222 (ENSCAFG00845007545) #29 SMARCE1 (ENSCAFG00845007717) #31 CCR7 (ENSCAFG00845007930) #32 TNS4 (ENSCAFG00845008016) #33 IGFBP4 (ENSCAFG00845008138) TOP2A (ENSCAFG00845008263) #34 TAF12 (ENSCAFG00845008570) #35 RARA (ENSCAFG00845008607) #36 CDC6 (ENSCAFG00845008754) #37 Red fox MODERN SPECIES 20 ENSVVUG00000024278 #8 ENSVVUG00000024280 #8 ENSVVUG00000024281 #9 ENSVVUG00000024282 #13 ENSVVUG00000024284 ENSVVUG00000024286 ENSVVUG00000024287 KRTAP3-1 (ENSVVUG00000024289) #14 ENSVVUG00000024291 #15 ENSVVUG00000024294 #16 ENSVVUG00000024296 #17 KRT40 (ENSVVUG00000024301) #18 KRT39 (ENSVVUG00000024305) #19 KRT23 (ENSVVUG00000024308) #20 KRT20 (ENSVVUG00000024310) #21 KRT12 (ENSVVUG00000024314) #22 KRT10 (ENSVVUG00000024318) #23 KRT28 (ENSVVUG00000024322) #24 KRT27 (ENSVVUG00000024325) #25 KRT26 (ENSVVUG00000024328) #26 KRT25 (ENSVVUG00000024329) #27 KRT24 (ENSVVUG00000000130) #28 KRT222 (ENSVVUG00000000398) #29 ENSVVUG00000000422 #31 CCR7 (ENSVVUG00000000457) #32 TNS4 (ENSVVUG00000000491) #33 IGFBP4 (ENSVVUG00000000835) TOP2A (ENSVVUG00000000844) #34 ENSVVUG00000000854 RARA (ENSVVUG00000000865) #36 CDC6 (ENSVVUG00000000907) #37 Caniformia_b ANCESTRAL SPECIES 21 ENSGT00940000159486.gb.b ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Ursidae ANCESTRAL SPECIES 18 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077.b #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Ursus ANCESTRAL SPECIES 87 ENSGT00940000163931 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C.xc #17 ENSGT00390000001157.C.yc #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077.b #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Polar bear MODERN SPECIES 95 ENSUMAG00000018199 #9 ENSUMAG00000018195 #9 ENSUMAG00000018188 #9 ENSUMAG00000018183 #9 ENSUMAG00000018180 ENSUMAG00000018176 #13 KRTAP3-1 (ENSUMAG00000018174) #14 ENSUMAG00000018170 #17 ENSUMAG00000018167 #17 KRT40 (ENSUMAG00000018152) #18 KRT39 (ENSUMAG00000018147) #19 KRT23 (ENSUMAG00000018142) #20 KRT20 (ENSUMAG00000018137) #21 KRT12 (ENSUMAG00000018128) #22 KRT10 (ENSUMAG00000018108) #23 KRT28 (ENSUMAG00000018099) #24 KRT27 (ENSUMAG00000018095) #25 KRT26 (ENSUMAG00000018091) #26 KRT25 (ENSUMAG00000018076) #27 KRT24 (ENSUMAG00000018046) #28 KRT222 (ENSUMAG00000018026) #29 SMARCE1 (ENSUMAG00000018005) #31 CCR7 (ENSUMAG00000017996) #32 TNS4 (ENSUMAG00000017925) #33 IGFBP4 (ENSUMAG00000017899) TOP2A (ENSUMAG00000017880) #34 RARA (ENSUMAG00000017839) #36 CDC6 (ENSUMAG00000017816) #37 WIPF2 (ENSUMAG00000017809) American black bear MODERN SPECIES 6791 KRT20 (ENSUAMG00000027918) #21 KRT12 (ENSUAMG00000027917) #22 Giant Panda MODERN SPECIES 4 ENSAMEG00000023481 KRT9 (ENSAMEG00000027196) KRT16 (ENSAMEG00000005579) ENSAMEG00000028827 ENSAMEG00000025134 ENSAMEG00000027447 ENSAMEG00000027894 #13 ENSAMEG00000028834 #13 ENSAMEG00000008411 #13 ENSAMEG00000019943 #14 ENSAMEG00000026945 #17 KRT40 (ENSAMEG00000008365) #18 KRT39 (ENSAMEG00000008358) #19 KRT23 (ENSAMEG00000008337) #20 KRT20 (ENSAMEG00000008325) #21 KRT12 (ENSAMEG00000008309) #22 KRT28 (ENSAMEG00000008303) #24 KRT26 (ENSAMEG00000008292) #26 KRT25 (ENSAMEG00000008170) #27 ENSAMEG00000028027 #23 KRT222 (ENSAMEG00000008167) #29 SMARCE1 (ENSAMEG00000008123) #31 CCR7 (ENSAMEG00000008120) #32 TNS4 (ENSAMEG00000008109) #33 IGFBP4 (ENSAMEG00000025172) TOP2A (ENSAMEG00000007989) #34 RARA (ENSAMEG00000007921) #36 CDC6 (ENSAMEG00000007868) #37 WIPF2 (ENSAMEG00000007849) RAPGEFL1 (ENSAMEG00000007814) CASC3 (ENSAMEG00000007764) Mustelinae ANCESTRAL SPECIES 2 ENSGT00940000159486.gb.b ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.q #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 American mink MODERN SPECIES 92 ENSNVIG00000001556 ENSNVIG00000001581 #9 ENSNVIG00000001599 KRTAP3-1 (ENSNVIG00000001605) #14 ENSNVIG00000001610 #15 ENSNVIG00000001613 #17 ENSNVIG00000001625 #17 KRT40 (ENSNVIG00000001640) #18 KRT39 (ENSNVIG00000001654) #19 K1C23 (ENSNVIG00000001671) #20 KRT20 (ENSNVIG00000001695) #21 KRT12 (ENSNVIG00000001720) #22 KRT10 (ENSNVIG00000001746) #23 KRT28 (ENSNVIG00000001803) #24 KRT27 (ENSNVIG00000001814) #25 KRT26 (ENSNVIG00000001823) #26 KRT25 (ENSNVIG00000001842) #27 KRT24 (ENSNVIG00000001847) #28 KT222 (ENSNVIG00000001863) #29 ENSNVIG00000001888 #31 CCR7 (ENSNVIG00000002253) #32 TNS4 (ENSNVIG00000002271) #33 IGFBP4 (ENSNVIG00000002312) TOP2A (ENSNVIG00000002325) #34 RARA (ENSNVIG00000002409) #36 CDC6 (ENSNVIG00000002533) #37 WIPF2 (ENSNVIG00000002634) Ferret MODERN SPECIES 270 ENSMPUG00000014568 ENSMPUG00000014572 ENSMPUG00000014574 KRTAP3-1 (ENSMPUG00000020082) #14 ENSMPUG00000020083 #17 KRT40 (ENSMPUG00000014577) #18 KRT23 (ENSMPUG00000014621) #20 KRT20 (ENSMPUG00000014622) #21 KRT12 (ENSMPUG00000014625) #22 KRT10 (ENSMPUG00000014636) #23 KRT28 (ENSMPUG00000014640) #24 KRT26 (ENSMPUG00000014642) #26 KRT25 (ENSMPUG00000014651) #27 KRT24 (ENSMPUG00000014653) #28 KRT222 (ENSMPUG00000014654) #29 ENSMPUG00000014660 #31 CCR7 (ENSMPUG00000014673) #32 TNS4 (ENSMPUG00000014676) #33 IGFBP4 (ENSMPUG00000014678) TOP2A (ENSMPUG00000014680) #34 RARA (ENSMPUG00000014863) #36 ENSMPUG00000014883 CDC6 (ENSMPUG00000014897) #37 WIPF2 (ENSMPUG00000014898) Felidae ANCESTRAL SPECIES 8 ENSGT00940000163658 ENSGT00940000163416 ENSGT00940000163931 ENSGT00940000159486.hb ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295.o #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Panthera ANCESTRAL SPECIES 14 ENSGT00940000164350.B ENSGT00940000159486.hb ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295.o #13 ENSGT00940000160295.p.b #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C.cd.b #17 ENSGT00390000001157.C.cd.a #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Tiger MODERN SPECIES 230 ENSPTIG00000012077 ENSPTIG00000011657 #13 ENSPTIG00000005285 #13 KRTAP3-1 (ENSPTIG00000005276) #14 ENSPTIG00000005265 #15 ENSPTIG00000005263 #17 ENSPTIG00000005258 #17 KRT40 (ENSPTIG00000009659) #18 KRT39 (ENSPTIG00000009611) #19 KRT23 (ENSPTIG00000008885) #20 KRT20 (ENSPTIG00000007826) #21 KRT12 (ENSPTIG00000006986) #22 KRT10 (ENSPTIG00000006172) #23 KRT28 (ENSPTIG00000005633) #24 KRT27 (ENSPTIG00000003088) #25 KRT26 (ENSPTIG00000000564) #26 KRT25 (ENSPTIG00000021487) #27 KRT24 (ENSPTIG00000021177) #28 KRT222 (ENSPTIG00000020976) #29 ENSPTIG00000019942 #31 CCR7 (ENSPTIG00000019719) #32 TNS4 (ENSPTIG00000019307) #33 IGFBP4 (ENSPTIG00000018826) TOP2A (ENSPTIG00000017914) #34 RARA (ENSPTIG00000015995) #36 CDC6 (ENSPTIG00000015145) #37 WIPF2 (ENSPTIG00000014120) Panthera_a ANCESTRAL SPECIES 13 ENSGT00940000153980.w.b ENSGT00940000153980.w.a.a ENSGT00940000163841.k ENSGT00940000153980.w.a.b ENSGT00940000163658 ENSGT00940000163416 ENSGT00940000160295.p.b #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C.cd.b #17 ENSGT00390000001157.C.cd.a #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 leopard MODERN SPECIES 273 ENSPPRG00000012558 ENSPPRG00000012574 #9 ENSPPRG00000012576 ENSPPRG00000012582 #9 ENSPPRG00000012588 #13 ENSPPRG00000012595 #13 ENSPPRG00000022039 #13 KRTAP3-1 (ENSPPRG00000012597) #14 ENSPPRG00000022062 #15 ENSPPRG00000012599 #17 ENSPPRG00000012602 #17 KRT40 (ENSPPRG00000022324) #18 KRT39 (ENSPPRG00000022347) #19 KRT23 (ENSPPRG00000022378) #20 KRT20 (ENSPPRG00000022399) #21 KRT12 (ENSPPRG00000022420) #22 KRT10 (ENSPPRG00000022440) #23 lion MODERN SPECIES 14 ENSPLOG00000015759 ENSPLOG00000015677 ENSPLOG00000015602 ENSPLOG00000015516 KRT33A (ENSPLOG00000015451) KRTAP16-1 (ENSPLOG00000015356) ENSPLOG00000015324 KRTAP3-1 (ENSPLOG00000015302) #14 ENSPLOG00000015267 #15 ENSPLOG00000015250 #17 ENSPLOG00000015231 #17 KRT40 (ENSPLOG00000015146) #18 KRT39 (ENSPLOG00000015059) #19 KRT23 (ENSPLOG00000014953) #20 KRT20 (ENSPLOG00000014850) #21 KRT12 (ENSPLOG00000014753) #22 KRT10 (ENSPLOG00000014662) #23 KRT28 (ENSPLOG00000014559) #24 KRT27 (ENSPLOG00000014479) #25 KRT26 (ENSPLOG00000014386) #26 KRT25 (ENSPLOG00000014291) #27 KRT24 (ENSPLOG00000014203) #28 KRT222 (ENSPLOG00000014138) #29 SMARCE1 (ENSPLOG00000013227) #31 CCR7 (ENSPLOG00000013103) #32 TNS4 (ENSPLOG00000012955) #33 IGFBP4 (ENSPLOG00000012896) TOP2A (ENSPLOG00000012809) #34 RARA (ENSPLOG00000012621) #36 CDC6 (ENSPLOG00000012533) #37 WIPF2 (ENSPLOG00000012439) Cat MODERN SPECIES 245 ENSFCAG00000045780 ENSFCAG00000053497 ENSFCAG00000045055 ENSFCAG00000040679 #13 ENSFCAG00000027774 #13 ENSFCAG00000008820 #13 ENSFCAG00000006428 #13 KRTAP3-1 (ENSFCAG00000013310) #14 ENSFCAG00000035429 #15 ENSFCAG00000033927 #17 ENSFCAG00000038642 #17 ENSFCAG00000046553 #18 KRT39 (ENSFCAG00000002023) #19 KRT23 (ENSFCAG00000002022) #20 KRT20 (ENSFCAG00000043236) #21 KRT12 (ENSFCAG00000002020) #22 KRT10 (ENSFCAG00000002019) #23 KRT28 (ENSFCAG00000044800) #24 KRT26 (ENSFCAG00000026580) #26 KRT25 (ENSFCAG00000042427) #27 KRT24 (ENSFCAG00000002015) #28 KRT222 (ENSFCAG00000018462) #29 SMARCE1 (ENSFCAG00000009646) #31 ENSFCAG00000036122 CCR7 (ENSFCAG00000033714) #32 TNS4 (ENSFCAG00000009644) #33 IGFBP4 (ENSFCAG00000045422) TOP2A (ENSFCAG00000009642) #34 GJD3 (ENSFCAG00000041256) RARA (ENSFCAG00000028515) #36 CDC6 (ENSFCAG00000030659) #37 Laurasiatheria_c ANCESTRAL SPECIES 3 ENSGT00940000159486 ENSGT00940000154448.b.b.b.b ENSGT00940000164263 ENSGT00940000163931 ENSGT00940000155433 #9 ENSGT00940000160443 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Equus ANCESTRAL SPECIES ENSGT00940000159486.fb ENSGT00940000154448.b.b.b.b ENSGT00940000159486.eb.b ENSGT00940000159486.eb.a.b ENSGT00940000159486.eb.a.a ENSGT00940000155433.q.a #9 ENSGT00940000160443.j ENSGT00940000160443.i ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Horse MODERN SPECIES 2 ENSECAG00000052248 ENSECAG00000028394 ENSECAG00000036742 ENSECAG00000050413 ENSECAG00000050669 ENSECAG00000055451 ENSECAG00000033315 ENSECAG00000051092 ENSECAG00000047844 ENSECAG00000059966 #9 ENSECAG00000052559 ENSECAG00000045648 KRT40 (ENSECAG00000056584) #18 KRT23 (ENSECAG00000014812) #20 KRT20 (ENSECAG00000026977) #21 KRT12 (ENSECAG00000018999) #22 KRT10A (ENSECAG00000020036) #23 ENSECAG00000024656 #23 KRT28 (ENSECAG00000009734) #24 KRT25 (ENSECAG00000013748) #27 KRT26 (ENSECAG00000012819) #26 KRT24 (ENSECAG00000016177) #28 KRT222 (ENSECAG00000026968) #29 SMARCE1 (ENSECAG00000022534) #31 CCR7 (ENSECAG00000004945) #32 TNS4 (ENSECAG00000007918) #33 IGFBP4 (ENSECAG00000011271) TOP2A (ENSECAG00000013053) #34 GJD3 (ENSECAG00000041545) RARA (ENSECAG00000023358) #36 CDC6 (ENSECAG00000009913) #37 Donkey MODERN SPECIES 4 ENSEASG00005026893 ENSEASG00005035834 ENSEASG00005033437 ENSEASG00005036720 #9 ENSEASG00005038813 #9 ENSEASG00005003740 ENSEASG00005024433 KRTAP3-1 (ENSEASG00005032224) #14 ENSEASG00005003734 #15 ENSEASG00005038141 #17 ENSEASG00005028083 #17 KRT40 (ENSEASG00005003721) #18 KRT39 (ENSEASG00005003716) #19 KRT23 (ENSEASG00005003713) #20 KRT20 (ENSEASG00005003710) #21 KRT12 (ENSEASG00005003707) #22 KRT10 (ENSEASG00005003703) #23 KRT27 (ENSEASG00005035050) #25 KRT26 (ENSEASG00005003695) #26 KRT25 (ENSEASG00005003693) #27 KRT24 (ENSEASG00005003685) #28 KRT222 (ENSEASG00005003681) #29 SMARCE1 (ENSEASG00005003680) #31 CCR7 (ENSEASG00005003679) #32 TNS4 (ENSEASG00005003677) #33 IGFBP4 (ENSEASG00005003675) TOP2A (ENSEASG00005003198) #34 GJD3 (ENSEASG00005031621) RARA (ENSEASG00005003055) #36 CDC6 (ENSEASG00005003036) #37 ENSEASG00005004849 Chiroptera ANCESTRAL SPECIES 2 ENSGT00940000162088 ENSGT00940000153980 ENSGT00940000163426 ENSGT00940000163841 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Megabat MODERN SPECIES 2609 KRT23 (ENSPVAG00000011372) #20 KRT20 (ENSPVAG00000011371) #21 KRT12 (ENSPVAG00000011370) #22 KRT10 (ENSPVAG00000011368) #23 KRT28 (ENSPVAG00000011367) #24 KRT27 (ENSPVAG00000011365) #25 KRT26 (ENSPVAG00000011363) #26 KRT25 (ENSPVAG00000011361) #27 KRT24 (ENSPVAG00000011359) #28 KRT222 (ENSPVAG00000011357) #29 SMARCE1 (ENSPVAG00000011355) #31 Microchiroptera ANCESTRAL SPECIES ENSGT00940000161991 ENSGT00940000163841 ENSGT00940000153980 ENSGT00940000163426 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Microbat MODERN SPECIES 1083 ENSMLUG00000015140 ENSMLUG00000015139 ENSMLUG00000014892 ENSMLUG00000014134 ENSMLUG00000010189 ENSMLUG00000007823 #9 ENSMLUG00000007830 #9 ENSMLUG00000007847 #13 KRTAP3-1 (ENSMLUG00000001160) #14 ENSMLUG00000001163 #17 ENSMLUG00000017264 #17 KRT40 (ENSMLUG00000017258) #18 KRT39 (ENSMLUG00000003103) #19 KRT23 (ENSMLUG00000003098) #20 KRT20 (ENSMLUG00000003085) #21 KRT12 (ENSMLUG00000003072) #22 KRT10 (ENSMLUG00000006133) #23 KRT25 (ENSMLUG00000004617) #27 ENSMLUG00000028688 #28 Artiodactyla ANCESTRAL SPECIES 4 ENSGT00940000159486.ab ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160443 ENSGT00940000160295 #13 ENSGT00390000001157.A.b #14 ENSGT00940000162756 ENSGT00730000111539 ENSGT00390000001157.A.a ##17 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Suina ANCESTRAL SPECIES ENSGT00940000153980.p ENSGT00940000163841 ENSGT00940000153980.o ENSGT00950000183407 ENSGT00940000163658 ENSGT00940000159486.`b.a.a.a ENSGT00940000160443.b ENSGT00940000160443.a ENSGT00940000160295 #13 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Chacoan peccary MODERN SPECIES 941 ENSCWAG00000017481 ENSCWAG00000017369 ENSCWAG00000017284 ENSCWAG00000017197 ENSCWAG00000017174 ENSCWAG00000017141 ENSCWAG00000017125 #13 ENSCWAG00000017118 ##17 ENSCWAG00000017103 #15 ENSCWAG00000017087 #17 ENSCWAG00000017078 #17 KRT40 (ENSCWAG00000017037) #18 KRT39 (ENSCWAG00000016982) #19 KRT23 (ENSCWAG00000016931) #20 KRT20 (ENSCWAG00000016869) #21 KRT12 (ENSCWAG00000016808) #22 KRT10 (ENSCWAG00000016732) #23 KRT28 (ENSCWAG00000016640) #24 KRT27 (ENSCWAG00000016581) #25 KRT26 (ENSCWAG00000016511) #26 KRT25 (ENSCWAG00000016404) #27 KRT222 (ENSCWAG00000016341) #29 SMARCE1 (ENSCWAG00000016110) #31 ENSCWAG00000016083 CCR7 (ENSCWAG00000016050) #32 TNS4 (ENSCWAG00000015968) #33 IGFBP4 (ENSCWAG00000015936) TOP2A (ENSCWAG00000015757) #34 RARA (ENSCWAG00000015541) #36 Pig MODERN SPECIES 3 ENSSSCG00000033085 ENSSSCG00000032172 ENSSSCG00000039030 #9 ENSSSCG00000025789 #9 ENSSSCG00000017451 #13 ENSSSCG00000027632 #13 ENSSSCG00000038114 ENSSSCG00000049072 #13 ENSSSCG00000055895 #15 ENSSSCG00000039927 #17 ENSSSCG00000054562 #17 KRT40 (ENSSSCG00000036987) #18 KRT39 (ENSSSCG00000017458) #19 KRT23 (ENSSSCG00000024067) #20 KRT20 (ENSSSCG00000017459) #21 KRT12 (ENSSSCG00000017460) #22 ENSSSCG00000058554 KRT10 (ENSSSCG00000028522) #23 KRT28 (ENSSSCG00000017461) #24 KRT27 (ENSSSCG00000017462) #25 KRT26 (ENSSSCG00000017463) #26 KRT25 (ENSSSCG00000017464) #27 KRT24 (ENSSSCG00000017465) #28 KRT222 (ENSSSCG00000036089) #29 SMARCE1 (ENSSSCG00000039137) #31 CCR7 (ENSSSCG00000017466) #32 TNS4 (ENSSSCG00000017470) #33 IGFBP4 (ENSSSCG00000017472) TOP2A (ENSSSCG00000017473) #34 RARA (ENSSSCG00000017475) #36 CDC6 (ENSSSCG00000017471) #37 Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160443 ENSGT00940000160295 #13 ENSGT00390000001157.A.b #14 ENSGT00940000162756 ENSGT00730000111539 ENSGT00730000111511 ENSGT00390000001157.A.a ##17 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT00940000154448.b.b.b.b ENSGT00940000159486.ab ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160443 ENSGT00940000160295 #13 ENSGT00940000162756 ENSGT00730000111539 ENSGT00390000001157.A.a ##17 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Cetacea ANCESTRAL SPECIES 5 ENSGT00940000161991 ENSGT00940000162088 ENSGT00940000153980.t ENSGT00940000163841 ENSGT00940000153980.s ENSGT00940000159486.ab ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00390000001157.A.a ##17 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000161950 #26 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Odontoceti ANCESTRAL SPECIES 16 ENSGT00940000155258.t ENSGT00940000154403.a.a ENSGT00940000154403.a.b ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000163841 ENSGT00940000153980.s ENSGT00940000160295 #13 ENSGT00390000001157.A.a ##17 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162088 ENSGT00940000153980.t ENSGT00940000159382 #22 ENSGT00940000161950 #26 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Odontoceti_a ANCESTRAL SPECIES 14 ENSGT00390000015789.c.a.b ENSGT00940000163247 ENSGT00940000160681.C ENSGT00940000154602.b ENSGT00940000154602.a ENSGT00940000155258.t ENSGT00940000154403.a.a ENSGT00940000154403.a.b ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000162088 ENSGT00940000153980.t ENSGT00940000163841 ENSGT00940000153980.s ENSGT00940000159382 #22 ENSGT00940000161950 #26 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Odontoceti_b ANCESTRAL SPECIES 16 ENSGT00940000163247 ENSGT00940000154602.b ENSGT00940000160681.C ENSGT00940000154602.a ENSGT00940000155258.t ENSGT00940000154403.a.a ENSGT00940000154403.a.b ENSGT00950000183311 ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000162088 ENSGT00940000153980.t ENSGT00940000163841 ENSGT00940000153980.s ENSGT00940000159382 #22 ENSGT00940000161950 #26 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Monodontidae ANCESTRAL SPECIES 16 ENSGT00390000014792 ENSGT00390000015789.c.a.b ENSGT00940000163247 ENSGT00940000154602.b ENSGT00940000160681.C ENSGT00940000155258.t ENSGT00940000154403.a.a ENSGT00940000154403.a.b ENSGT00950000183311 ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000162088 ENSGT00940000163841 ENSGT00940000153980.s ENSGT00940000159382 #22 ENSGT00940000161950 #26 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Narwhal MODERN SPECIES 316 GAST (ENSMMNG00015017208) EIF1 (ENSMMNG00015017110) ENSMMNG00015017066 ENSMMNG00015017022 KRT16 (ENSMMNG00015016975) ENSMMNG00015016841 KRT19 (ENSMMNG00015016751) KRT15 (ENSMMNG00015016652) KRT13 (ENSMMNG00015016552) KRT36 (ENSMMNG00015016489) KRT35 (ENSMMNG00015016167) KRT32 (ENSMMNG00015016021) ENSMMNG00015015975 ENSMMNG00015020884 ENSMMNG00015020870 KRT12 (ENSMMNG00015020854) #22 ENSMMNG00015020836 #26 KRT24 (ENSMMNG00015020814) #28 KRT222 (ENSMMNG00015020791) #29 ENSMMNG00015020648 #31 CCR7 (ENSMMNG00015020594) #32 TNS4 (ENSMMNG00015020571) #33 IGFBP4 (ENSMMNG00015020546) TOP2A (ENSMMNG00015020530) #34 GJD3 (ENSMMNG00015020507) RARA (ENSMMNG00015020465) #36 CDC6 (ENSMMNG00015020434) #37 WIPF2 (ENSMMNG00015020404) RAPGEFL1 (ENSMMNG00015020323) CASC3 (ENSMMNG00015020273) MSL1 (ENSMMNG00015020237) Beluga whale MODERN SPECIES 26 P3H4 (ENSDLEG00000010296) JUP (ENSDLEG00000010325) HAP1 (ENSDLEG00000010394) GAST (ENSDLEG00000010409) EIF1 (ENSDLEG00000010424) ENSDLEG00000010442 KRT36 (ENSDLEG00000010471) ENSDLEG00000010541 ENSDLEG00000010559 KRT15 (ENSDLEG00000010588) ENSDLEG00000010656 KRT35 (ENSDLEG00000010700) KRT32 (ENSDLEG00000011003) ENSDLEG00000011512 KRT33A (ENSDLEG00000011528) KRT12 (ENSDLEG00000011548) #22 KRT24 (ENSDLEG00000011564) #28 KRT222 (ENSDLEG00000011592) #29 SMARCE1 (ENSDLEG00000011604) #31 CCR7 (ENSDLEG00000011618) #32 TNS4 (ENSDLEG00000011633) #33 IGFBP4 (ENSDLEG00000011662) TOP2A (ENSDLEG00000011757) #34 GJD3 (ENSDLEG00000013297) RARA (ENSDLEG00000013307) #36 CDC6 (ENSDLEG00000013333) #37 WIPF2 (ENSDLEG00000013388) RAPGEFL1 (ENSDLEG00000013410) CASC3 (ENSDLEG00000013448) MSL1 (ENSDLEG00000013463) NR1D1 (ENSDLEG00000013483) Vaquita MODERN SPECIES 12 HAP1 (ENSPSNG00000013642) GAST (ENSPSNG00000013554) ENSPSNG00000013484 ENSPSNG00000013387 KRT17 (ENSPSNG00000013207) ENSPSNG00000013136 KRT14 (ENSPSNG00000013111) KRT19 (ENSPSNG00000013067) KRT15 (ENSPSNG00000012869) KRT13 (ENSPSNG00000012628) KRT36 (ENSPSNG00000012532) KRT35 (ENSPSNG00000012426) ENSPSNG00000012074 ENSPSNG00000011974 ENSPSNG00000011948 KRT12 (ENSPSNG00000011850) #22 KRT222 (ENSPSNG00000011342) #29 ENSPSNG00000011023 #31 CCR7 (ENSPSNG00000010907) #32 TNS4 (ENSPSNG00000010768) #33 IGFBP4 (ENSPSNG00000010715) TOP2A (ENSPSNG00000010629) #34 RARA (ENSPSNG00000010408) #36 CDC6 (ENSPSNG00000010325) #37 RAPGEFL1 (ENSPSNG00000009921) CASC3 (ENSPSNG00000009773) MSL1 (ENSPSNG00000009592) NR1D1 (ENSPSNG00000009539) THRA (ENSPSNG00000009491) MED24 (ENSPSNG00000009228) CSF3 (ENSPSNG00000008991) Dolphin MODERN SPECIES 4094 KRT12 (ENSTTRG00000003254) #22 Sperm whale MODERN SPECIES 5 ENSPCTG00005013413 ENSPCTG00005013296 KRT14 (ENSPCTG00005013034) KRT19 (ENSPCTG00005012929) KRT15 (ENSPCTG00005012795) KRT13 (ENSPCTG00005012719) KRT36 (ENSPCTG00005012640) KRT32 (ENSPCTG00005012144) ENSPCTG00005011986 ENSPCTG00005011593 ENSPCTG00005011457 #13 ENSPCTG00005011439 ##17 ENSPCTG00005011402 #15 ENSPCTG00005011382 #17 KRT40 (ENSPCTG00005011311) #18 KRT12 (ENSPCTG00005011232) #22 ENSPCTG00005011172 #28 KRT222 (ENSPCTG00005011101) #29 SMARCE1 (ENSPCTG00005010790) #31 CCR7 (ENSPCTG00005010723) #32 TNS4 (ENSPCTG00005010657) #33 TOP2A (ENSPCTG00005010563) #34 WIPF2 (ENSPCTG00005010469) MSL1 (ENSPCTG00005010403) CASC3 (ENSPCTG00005010303) PSMD3 (ENSPCTG00005010192) LRRC3C (ENSPCTG00005010173) ORMDL3 (ENSPCTG00005010109) ZPBP2 (ENSPCTG00005010055) IKZF3 (ENSPCTG00005008014) GRB7 (ENSPCTG00005007782) Blue whale MODERN SPECIES 12 ENSBMSG00010017828 ENSBMSG00010017779 ENSBMSG00010017768 ENSBMSG00010017743 #13 ENSBMSG00010017722 #13 ENSBMSG00010017711 #13 ENSBMSG00010017700 ##17 ENSBMSG00010017678 #15 ENSBMSG00010017663 #17 ENSBMSG00010017650 #17 ENSBMSG00010017624 #18 KRT39 (ENSBMSG00010015952) #19 KRT23 (ENSBMSG00010015818) #20 ENSBMSG00010015791 KRT20 (ENSBMSG00010015759) #21 KRT12 (ENSBMSG00010015720) #22 KRT24 (ENSBMSG00010015682) #28 KRT222 (ENSBMSG00010015655) #29 ENSBMSG00010015441 #31 CCR7 (ENSBMSG00010015376) #32 TNS4 (ENSBMSG00010015347) #33 IGFBP4 (ENSBMSG00010015319) TOP2A (ENSBMSG00010015282) #34 RARA (ENSBMSG00010015127) #36 CDC6 (ENSBMSG00010015096) #37 WIPF2 (ENSBMSG00010015049) RAPGEFL1 (ENSBMSG00010015020) CASC3 (ENSBMSG00010014953) MSL1 (ENSBMSG00010014889) ENSBMSG00010014868 NR1D1 (ENSBMSG00010014854) Pecora ANCESTRAL SPECIES 1 ENSGT00940000159486.`b.a.a.a.a ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295.u #13 ENSGT00940000160443 ENSGT00940000160295.v #13 ENSGT00940000162756 ENSGT00730000111539 ENSGT00390000001157.A.a ##17 ENSGT00390000001157.B #15 ENSGT00390000001157.C.jc #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Yarkand deer MODERN SPECIES 28 ENSCHYG00000006258 ENSCHYG00000006250 ENSCHYG00000006103 ENSCHYG00000006077 ENSCHYG00000006067 ENSCHYG00000006053 ENSCHYG00000006043 #9 ENSCHYG00000006037 #13 ENSCHYG00000006022 ##17 ENSCHYG00000006013 #15 ENSCHYG00000004486 #17 KRT40 (ENSCHYG00000004477) #18 KRT39 (ENSCHYG00000004465) #19 KRT23 (ENSCHYG00000004447) #20 KRT20 (ENSCHYG00000004429) #21 KRT12 (ENSCHYG00000004408) #22 KRT10 (ENSCHYG00000004393) #23 KRT28 (ENSCHYG00000004357) #24 KRT27 (ENSCHYG00000004325) #25 KRT26 (ENSCHYG00000004300) #26 KRT25 (ENSCHYG00000004269) #27 KRT24 (ENSCHYG00000004238) #28 KRT222 (ENSCHYG00000004215) #29 SMARCE1 (ENSCHYG00000004192) #31 CCR7 (ENSCHYG00000004168) #32 TNS4 (ENSCHYG00000004150) #33 IGFBP4 (ENSCHYG00000004135) TOP2A (ENSCHYG00000004090) #34 RARA (ENSCHYG00000003992) #36 CDC6 (ENSCHYG00000003946) #37 WIPF2 (ENSCHYG00000003920) Percora_a ANCESTRAL SPECIES 2 ENSGT00940000155258.t ENSGT00940000154403.a.a ENSGT00940000154403.a.b ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000162088.h ENSGT00940000162088.g ENSGT00940000153980.q ENSGT00390000001157.B #15 ENSGT00390000001157.C.jc #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Siberian musk deer MODERN SPECIES 1210 ENSMMSG00000013897 ENSMMSG00000013853 ENSMMSG00000023929 ENSMMSG00000023925 ENSMMSG00000023922 ENSMMSG00000023920 #13 ENSMMSG00000023916 #13 ENSMMSG00000023913 ENSMMSG00000023911 #13 ENSMMSG00000023909 ##17 ENSMMSG00000023903 #15 KRT40 (ENSMMSG00000023897) #18 KRT39 (ENSMMSG00000023878) #19 KRT23 (ENSMMSG00000023863) #20 KRT20 (ENSMMSG00000023852) #21 KRT12 (ENSMMSG00000023847) #22 KRT10 (ENSMMSG00000023842) #23 KRT28 (ENSMMSG00000023835) #24 KRT27 (ENSMMSG00000023828) #25 KRT26 (ENSMMSG00000023818) #26 KRT25 (ENSMMSG00000023811) #27 KRT24 (ENSMMSG00000023804) #28 KRT222 (ENSMMSG00000023799) #29 ENSMMSG00000023764 #31 CCR7 (ENSMMSG00000023753) #32 TNS4 (ENSMMSG00000023734) #33 IGFBP4 (ENSMMSG00000023725) TOP2A (ENSMMSG00000023680) #34 RARA (ENSMMSG00000023636) #36 CDC6 (ENSMMSG00000023611) #37 WIPF2 (ENSMMSG00000023597) Bovidae ANCESTRAL SPECIES 2 ENSGT00940000154403.a.b ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000162088.h ENSGT00940000162088.g ENSGT00940000153980.q.b ENSGT00940000163426 ENSGT00940000153980.q.a ENSGT00390000001157.B #15 ENSGT00390000001157.C.jc #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000154268.e.b.a ENSGT01090000260005.a.b.a.a Bovinae ANCESTRAL SPECIES ENSGT00940000159486.`b.a.a.b.b ENSGT00940000155433 #9 ENSGT00940000162736.i ENSGT00940000160443.c.b ENSGT00940000160443.c.a ENSGT00940000160295.u #13 ENSGT00940000160443.d ENSGT00940000160295.v #13 ENSGT00390000001157.B #15 ENSGT00390000001157.C.jc #17 ENSGT00940000161968 #18 ENSGT01050000244940.a.a.bb.a ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000154268.e.b.a ENSGT01090000260005.a.b.a.a Bos ANCESTRAL SPECIES 1 ENSGT00940000159486.`b.a.a.b.b.c.a.b ENSGT00940000155433 #9 ENSGT00940000160295.u #13 ENSGT00940000162736.i ENSGT00940000160443.c.b ENSGT00940000160443.c.a ENSGT00940000160443.d ENSGT00940000160295.v #13 ENSGT00390000001157.C.jc.j #17 ENSGT00390000001157.C.jc.i.a #17 ENSGT00940000161968 #18 ENSGT01050000244940.a.a.bb.a ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000154268.e.b.a ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Bos_a ANCESTRAL SPECIES ENSGT00940000159486.`b.a.a.b.b.c.b ENSGT00940000159486.`b.a.a.b.b.d ENSGT00940000162736.i.b ENSGT00940000160443.c.b ENSGT00940000160443.c.a ENSGT00940000160443.d ENSGT00940000160295.v #13 ENSGT00390000001157.B #15 ENSGT00390000001157.C.jc.i.b #17 ENSGT00390000001157.C.jc.i.a #17 ENSGT00940000161968 #18 ENSGT01050000244940.a.a.bb.a ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000154268.e.b.a ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Domestic yak MODERN SPECIES 10 ENSBGRG00000014915 ENSBGRG00000014928 #9 ENSBGRG00000015034 ENSBGRG00000015061 ENSBGRG00000015074 ENSBGRG00000015111 ENSBGRG00000015136 #13 KAP3-1 (ENSBGRG00000015154) ##17 ENSBGRG00000015181 #15 ENSBGRG00000015228 #17 KAP3.3 (ENSBGRG00000015266) #17 KRT40 (ENSBGRG00000015292) #18 KRT39 (ENSBGRG00000015379) #19 KRT23 (ENSBGRG00000015492) #20 KRT20 (ENSBGRG00000016100) #21 KRT12 (ENSBGRG00000016211) #22 KRT10 (ENSBGRG00000016347) #23 KRT28 (ENSBGRG00000016455) #24 KRT27 (ENSBGRG00000016581) #25 KRT26 (ENSBGRG00000016662) #26 KRT25 (ENSBGRG00000016734) #27 KRT24 (ENSBGRG00000016783) #28 KRT222 (ENSBGRG00000016889) #29 SMARCE1 (ENSBGRG00000016928) #31 CCR7 (ENSBGRG00000017039) #32 TNS4 (ENSBGRG00000017101) #33 IGFBP4 (ENSBGRG00000017437) TOP2A (ENSBGRG00000017633) #34 ENSBGRG00000019354 ENSBGRG00000019366 RARA (ENSBGRG00000019399) #36 Wild yak MODERN SPECIES 1109 ENSBMUG00000007308 ENSBMUG00000007315 ENSBMUG00000007321 ENSBMUG00000007333 #9 ENSBMUG00000007360 #13 ENSBMUG00000007379 #13 ENSBMUG00000007389 ##17 ENSBMUG00000007393 #15 ENSBMUG00000007396 #17 ENSBMUG00000007403 #17 KRT40 (ENSBMUG00000007416) #18 ENSBMUG00000007422 KRT39 (ENSBMUG00000007430) #19 KRT23 (ENSBMUG00000007436) #20 KRT20 (ENSBMUG00000007456) #21 KRT12 (ENSBMUG00000007467) #22 KRT10 (ENSBMUG00000007473) #23 KRT28 (ENSBMUG00000007482) #24 KRT27 (ENSBMUG00000007494) #25 KRT26 (ENSBMUG00000007503) #26 ENSBMUG00000007508 Bos_b ANCESTRAL SPECIES 15 ENSGT00940000159486.`b.a.a.b.b.c.a.a.b.a ENSGT00940000155433.i.b #9 ENSGT00940000155433.i.a #9 ENSGT00940000162736.i ENSGT00940000160443.c.b ENSGT00940000160443.c.a ENSGT00940000160443.d ENSGT00940000160295.v #13 ENSGT00390000001157.C.jc.j #17 ENSGT00390000001157.B #15 ENSGT00390000001157.C.jc.i.a #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000154268.e.b.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Cow MODERN SPECIES 10 ENSBTAG00000039644 #9 ENSBTAG00000037665 #9 ENSBTAG00000038759 #9 ENSBTAG00000049202 KRTAP1-1 (ENSBTAG00000030559) ENSBTAG00000024995 ENSBTAG00000050460 #13 KRTAP3-1 (ENSBTAG00000052919) ##17 ENSBTAG00000054542 #15 ENSBTAG00000054092 #17 KRTAP3-3 (ENSBTAG00000054927) #17 KRT40 (ENSBTAG00000017408) #18 KRT39 (ENSBTAG00000020078) #19 KRT23 (ENSBTAG00000040460) #20 KRT20 (ENSBTAG00000007794) #21 KRT12 (ENSBTAG00000015518) #22 KRT10 (ENSBTAG00000020824) #23 KRT28 (ENSBTAG00000030555) #24 KRT27 (ENSBTAG00000030548) #25 KRT26 (ENSBTAG00000030546) #26 KRT25 (ENSBTAG00000030542) #27 KRT24 (ENSBTAG00000040279) #28 KRT222 (ENSBTAG00000030539) #29 SMARCE1 (ENSBTAG00000015308) #31 CCR7 (ENSBTAG00000015133) #32 TNS4 (ENSBTAG00000007958) #33 IGFBP4 (ENSBTAG00000008611) TOP2A (ENSBTAG00000019262) #34 ENSBTAG00000052844 RARA (ENSBTAG00000012500) #36 CDC6 (ENSBTAG00000010384) #37 Hybrid Bos Indicus MODERN SPECIES 10 ENSBIXG00005031344 #9 ENSBIXG00005031342 #9 ENSBIXG00005031341 ENSBIXG00005031339 ENSBIXG00005031336 ENSBIXG00005031334 ENSBIXG00005031333 #13 ENSBIXG00005031332 ENSBIXG00005031331 ENSBIXG00005031330 #13 ENSBIXG00005031329 #17 KRT40 (ENSBIXG00005031328) #18 KRT39 (ENSBIXG00005031324) #19 KRT23 (ENSBIXG00005031323) #20 KRT20 (ENSBIXG00005031321) #21 KRT12 (ENSBIXG00005031316) #22 KRT26 (ENSBIXG00005031310) #26 KRT28 (ENSBIXG00005031306) #24 KRT24 (ENSBIXG00005031302) #28 KRT222 (ENSBIXG00005031299) #29 SMARCE1 (ENSBIXG00005031296) #31 CCR7 (ENSBIXG00005031295) #32 TNS4 (ENSBIXG00005031291) #33 IGFBP4 (ENSBIXG00005031288) TOP2A (ENSBIXG00005031281) #34 ENSBIXG00005031277 RARA (ENSBIXG00005031268) #36 CDC6 (ENSBIXG00005031258) #37 WIPF2 (ENSBIXG00005031247) RAPGEFL1 (ENSBIXG00005031234) CASC3 (ENSBIXG00005031226) American bison MODERN SPECIES 3101 ENSBBBG00000010127 ENSBBBG00000010122 #9 ENSBBBG00000010119 ENSBBBG00000010115 ENSBBBG00000010112 ENSBBBG00000006688 #13 ENSBBBG00000025245 ##17 ENSBBBG00000025241 #15 ENSBBBG00000008086 #17 ENSBBBG00000025235 #17 KRT40 (ENSBBBG00000025230) #18 ENSBBBG00000025197 KRT39 (ENSBBBG00000006669) #19 KRT23 (ENSBBBG00000025161) #20 KRT20 (ENSBBBG00000025144) #21 KRT12 (ENSBBBG00000025119) #22 KRT10 (ENSBBBG00000006646) #23 KRT28 (ENSBBBG00000007843) #24 KRT27 (ENSBBBG00000025042) #25 KRT26 (ENSBBBG00000006612) #26 KRT25 (ENSBBBG00000025011) #27 KRT24 (ENSBBBG00000024991) #28 KRT222 (ENSBBBG00000024971) #29 ENSBBBG00000007827 #30 SMARCE1 (ENSBBBG00000024947) #31 CCR7 (ENSBBBG00000024903) #32 TNS4 (ENSBBBG00000024883) #33 IGFBP4 (ENSBBBG00000024848) TOP2A (ENSBBBG00000024833) #34 ENSBBBG00000007723 RARA (ENSBBBG00000024732) #36 Caprinae ANCESTRAL SPECIES 1 ENSGT00940000163416.p.a.b ENSGT00940000159486.`b.a.a.b.b.a ENSGT00940000159486.`b.a.a.b.b.b ENSGT00940000162736.l ENSGT00940000162736.k ENSGT00940000160295.u #13 ENSGT00940000160443 ENSGT00940000160295.v #13 ENSGT00390000001157.A.a ##17 ENSGT00390000001157.B #15 ENSGT00390000001157.C.jc #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000154268.e.b.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Rambouillet Sheep MODERN SPECIES 2 ENSOARG00020006213 ENSOARG00020006222 ENSOARG00020006235 ENSOARG00020006246 KRTAP1-1 (ENSOARG00020006263) #13 KRTAP1-3 (ENSOARG00020006325) #13 KAP3.2 (ENSOARG00020006425) ##17 ENSOARG00020006438 #15 ENSOARG00020006457 #17 BIIIB4 (ENSOARG00020006476) #17 KRT40 (ENSOARG00020006496) #18 ENSOARG00020006570 KRT39 (ENSOARG00020006647) #19 KRT23 (ENSOARG00020006727) #20 KRT20 (ENSOARG00020006793) #21 KRT12 (ENSOARG00020006858) #22 KRT10 (ENSOARG00020006954) #23 KRT28 (ENSOARG00020007049) #24 KRT27 (ENSOARG00020007155) #25 KRT26 (ENSOARG00020007244) #26 KRT25 (ENSOARG00020007286) #27 KRT24 (ENSOARG00020007351) #28 KRT222 (ENSOARG00020007428) #29 SMARCE1 (ENSOARG00020007516) #31 CCR7 (ENSOARG00020007720) #32 TNS4 (ENSOARG00020007745) #33 IGFBP4 (ENSOARG00020007791) TOP2A (ENSOARG00020007860) #34 RARA (ENSOARG00020008581) #36 CDC6 (ENSOARG00020008853) #37 WIPF2 (ENSOARG00020008893) Goat MODERN SPECIES 10 ENSCHIG00000008757 ENSCHIG00000006463 ENSCHIG00000007577 ENSCHIG00000026924 #13 ENSCHIG00000014439 ENSCHIG00000023678 #13 ENSCHIG00000016488 ENSCHIG00000022685 #13 KRTAP3-1 (ENSCHIG00000001659) ##17 ENSCHIG00000024894 #17 ENSCHIG00000004564 #17 KRT40 (ENSCHIG00000024829) #18 KRT39 (ENSCHIG00000017306) #19 KRT23 (ENSCHIG00000013100) #20 KRT20 (ENSCHIG00000013291) #21 KRT12 (ENSCHIG00000018097) #22 KRT10 (ENSCHIG00000025099) #23 KRT28 (ENSCHIG00000015839) #24 KRT27 (ENSCHIG00000024470) #25 KRT26 (ENSCHIG00000011943) #26 KRT25 (ENSCHIG00000015383) #27 KRT24 (ENSCHIG00000012661) #28 KRT222 (ENSCHIG00000023613) #29 SMARCE1 (ENSCHIG00000012322) #31 CCR7 (ENSCHIG00000019145) #32 TNS4 (ENSCHIG00000026674) #33 IGFBP4 (ENSCHIG00000014813) TOP2A (ENSCHIG00000012498) #34 ENSCHIG00000003132 RARA (ENSCHIG00000014719) #36 CDC6 (ENSCHIG00000009302) #37 Camelidae ANCESTRAL SPECIES 60 ENSGT00940000159486.ab.a.a.a ENSGT00940000162736 ENSGT00940000160295.t #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Arabian camel MODERN SPECIES 7 ENSCDRG00005008781 ENSCDRG00005008758 ENSCDRG00005008736 #13 ENSCDRG00005008718 #13 ENSCDRG00005008703 #13 ENSCDRG00005008691 #13 ENSCDRG00005008658 #13 KRTAP3-1 (ENSCDRG00005008632) #14 ENSCDRG00005008593 #15 ENSCDRG00005008570 #17 ENSCDRG00005008551 #17 KRT40 (ENSCDRG00005008540) #18 KRT39 (ENSCDRG00005008468) #19 KRT23 (ENSCDRG00005008329) #20 KRT20 (ENSCDRG00005008233) #21 KRT12 (ENSCDRG00005008188) #22 KRT10 (ENSCDRG00005008151) #23 KRT28 (ENSCDRG00005008097) #24 KRT27 (ENSCDRG00005008025) #25 KRT26 (ENSCDRG00005007950) #26 KRT25 (ENSCDRG00005007856) #27 KRT24 (ENSCDRG00005007765) #28 KRT222 (ENSCDRG00005007721) #29 SMARCE1 (ENSCDRG00005007508) #31 CCR7 (ENSCDRG00005007460) #32 TNS4 (ENSCDRG00005007372) #33 IGFBP4 (ENSCDRG00005007330) TOP2A (ENSCDRG00005007292) #34 RARA (ENSCDRG00005007055) #36 CDC6 (ENSCDRG00005006919) #37 WIPF2 (ENSCDRG00005006814) Alpaca DUPLICATION Alpaca MODERN SPECIES 2122 ENSVPAG00000000998 ENSVPAG00000015470 #13 ENSVPAG00000015521 #13 KRTAP3-1 (ENSVPAG00000000997) #14 ENSVPAG00000000996 #17 ENSVPAG00000000995 #17 KRT40 (ENSVPAG00000000994) #18 KRT23 (ENSVPAG00000000993) #20 ENSVPAG00000000990 #21 KRT12 (ENSVPAG00000000988) #22 KRT10 (ENSVPAG00000000987) #23 KRT28 (ENSVPAG00000000986) #24 KRT27 (ENSVPAG00000000985) #25 KRT26 (ENSVPAG00000000983) #26 KRT25 (ENSVPAG00000000982) #27 ENSVPAG00000000981 #22 KRT222 (ENSVPAG00000000980) #29 SMARCE1 (ENSVPAG00000000979) #31 Alpaca MODERN SPECIES 2122 ENSVPAG00000000998 ENSVPAG00000015470 #13 ENSVPAG00000015521 #13 KRTAP3-1 (ENSVPAG00000000997) #14 ENSVPAG00000000996 #17 ENSVPAG00000000995 #17 KRT40 (ENSVPAG00000000994) #18 KRT23 (ENSVPAG00000000993) #20 ENSVPAG00000000990 #21 KRT12 (ENSVPAG00000000988) #22 KRT10 (ENSVPAG00000000987) #23 KRT28 (ENSVPAG00000000986) #24 KRT27 (ENSVPAG00000000985) #25 KRT26 (ENSVPAG00000000983) #26 KRT25 (ENSVPAG00000000982) #27 ENSVPAG00000000981 #22 KRT222 (ENSVPAG00000000980) #29 SMARCE1 (ENSVPAG00000000979) #31 Eulipotyphla ANCESTRAL SPECIES 64 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 Common shrew MODERN SPECIES 6120 ENSSARG00000003299 #21 ENSSARG00000003265 #22 ENSSARG00000003234 #23 KRT28 (ENSSARG00000003188) #24 KRT26 (ENSSARG00000003150) #26 Hedgehog MODERN SPECIES 7866 KRT20 (ENSEEUG00000000048) #21 KRT12 (ENSEEUG00000000041) #22 Euarchontoglires ANCESTRAL SPECIES 4 ENSGT00940000159486 ENSGT00940000163931 ENSGT00940000154448.b.b.b.a.a ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b #31 ENSGT00940000164415 #30 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT01100000265611 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000163931 ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Glires ANCESTRAL SPECIES 3 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000159486.e.a ENSGT00940000163931 ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Rodentia ANCESTRAL SPECIES 4 ENSGT00940000163931 ENSGT00940000154448.b.b.b.b.e.a ENSGT00940000159486.e.a ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Rodentia_B ANCESTRAL SPECIES 1 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000163931 ENSGT00940000159486.f ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Kangaroo rat MODERN SPECIES 326 ENSDORG00000026358 ENSDORG00000023366 ENSDORG00000008477 ENSDORG00000023721 ENSDORG00000012266 ENSDORG00000024033 #9 ENSDORG00000028606 #9 ENSDORG00000016176 #13 ENSDORG00000025402 #13 ENSDORG00000024187 #17 ENSDORG00000023985 #17 Krt40 (ENSDORG00000016181) #18 Krt39 (ENSDORG00000008898) #19 Krt23 (ENSDORG00000001625) #20 Krt20 (ENSDORG00000001623) #21 ENSDORG00000001618 #22 Krt10 (ENSDORG00000006753) #23 Krt28 (ENSDORG00000006752) #24 Krt27 (ENSDORG00000006751) #25 Krt26 (ENSDORG00000006750) #26 Krt25 (ENSDORG00000006749) #27 Krt24 (ENSDORG00000016005) #28 Krt222 (ENSDORG00000016002) #29 Smarce1 (ENSDORG00000015999) #31 Ccr7 (ENSDORG00000014123) #32 Tns4 (ENSDORG00000016056) #33 Igfbp4 (ENSDORG00000016055) Top2a (ENSDORG00000016054) #34 Rara (ENSDORG00000023922) #36 Cdc6 (ENSDORG00000015184) #37 ENSDORG00000026557 Myomorpha ANCESTRAL SPECIES ENSGT00940000164263 ENSGT00940000153980.j.a.a ENSGT00940000153980.j.a.b.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000159486.f ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Muroidea ANCESTRAL SPECIES ENSGT00940000159486.f.f ENSGT00940000154448.b.b.b.b.f ENSGT00940000159486.f.e.a.a.a ENSGT00940000155433 #9 ENSGT00940000160295.ib.a #13 ENSGT00940000160295.ib.b.b.a.a #13 ENSGT00940000160295.ib.b.a #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000159486.f.f.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000160295.ib.a #13 ENSGT00940000160295.ib.b.a #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Cricetidae ANCESTRAL SPECIES ENSGT00940000154403.a.b ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000153980.j.a.b.a.b ENSGT00940000163426 ENSGT00940000153980.j.a.a ENSGT00940000160295.ib.a #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000153980.j.a.b.a.a.b ENSGT00940000163658 ENSGT00940000159486.f.e.a.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000160295.ib.b.b.a.b #13 ENSGT00940000160295.ib.b.b.a.a #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Northern American deer mouse MODERN SPECIES 21 Gm11555 (ENSPEMG00000028694) ENSPEMG00000027729 ENSPEMG00000028223 #9 ENSPEMG00000024614 #9 ENSPEMG00000030371 #9 ENSPEMG00000025752 #9 Krtap1-5 (ENSPEMG00000014953) Krtap3-1 (ENSPEMG00000014982) #14 Gm11939 (ENSPEMG00000025106) #15 ENSPEMG00000027732 #17 ENSPEMG00000030050 #17 Krt40 (ENSPEMG00000011683) #18 Krt39 (ENSPEMG00000013051) #19 Krt23 (ENSPEMG00000010375) #20 Krt20 (ENSPEMG00000008907) #21 Krt12 (ENSPEMG00000012317) #22 Krt10 (ENSPEMG00000016211) #23 Krt28 (ENSPEMG00000017906) #24 Krt27 (ENSPEMG00000002310) #25 Krt26 (ENSPEMG00000012535) #26 Krt25 (ENSPEMG00000016149) #27 Krt24 (ENSPEMG00000017697) #28 Krt222 (ENSPEMG00000011259) #29 Smarce1 (ENSPEMG00000018043) #31 Ccr7 (ENSPEMG00000009706) #32 Tns4 (ENSPEMG00000020329) #33 Igfbp4 (ENSPEMG00000014210) Top2a (ENSPEMG00000016393) #34 Gjd3 (ENSPEMG00000014917) Rara (ENSPEMG00000010534) #36 Cdc6 (ENSPEMG00000012427) #37 Prairie vole MODERN SPECIES 114 Gm11563 (ENSMOCG00000017454) ENSMOCG00000009228 #9 ENSMOCG00000005151 #9 ENSMOCG00000005136 #9 ENSMOCG00000005678 #9 ENSMOCG00000010132 #13 ENSMOCG00000003960 #13 Krtap1-5 (ENSMOCG00000012540) Krtap3-1 (ENSMOCG00000020675) #14 ENSMOCG00000005111 #17 ENSMOCG00000002845 #17 Krt40 (ENSMOCG00000016435) #18 Krt39 (ENSMOCG00000018914) #19 Krt23 (ENSMOCG00000014828) #20 Krt20 (ENSMOCG00000002735) #21 Krt12 (ENSMOCG00000001503) #22 Krt10 (ENSMOCG00000009134) #23 Krt28 (ENSMOCG00000007496) #24 Krt27 (ENSMOCG00000005020) #25 Krt26 (ENSMOCG00000014953) #26 Krt25 (ENSMOCG00000020569) #27 Krt24 (ENSMOCG00000017266) #28 Krt222 (ENSMOCG00000021148) #29 ENSMOCG00000015059 #31 Ccr7 (ENSMOCG00000004292) #32 Tns4 (ENSMOCG00000022959) #33 Igfbp4 (ENSMOCG00000021157) Top2a (ENSMOCG00000013182) #34 Gjd3 (ENSMOCG00000005264) Rara (ENSMOCG00000016096) #36 Cdc6 (ENSMOCG00000021152) #37 Cricetinae ANCESTRAL SPECIES ENSGT00940000163658 ENSGT00940000164459 ENSGT00840000130699 ENSGT00940000159486.f.f.a.b ENSGT00940000163416 ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000160295.ib.b.b.a.b #13 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Golden Hamster MODERN SPECIES 674 ENSMAUG00000021591 ENSMAUG00000014874 ENSMAUG00000016423 ENSMAUG00000010652 Krtap1-3 (ENSMAUG00000013235) #13 Krtap3-1 (ENSMAUG00000010133) #14 ENSMAUG00000010087 #17 Krt40 (ENSMAUG00000019288) #18 Krt39 (ENSMAUG00000011575) #19 Krt23 (ENSMAUG00000015956) #20 Krt20 (ENSMAUG00000012821) #21 Krt12 (ENSMAUG00000021614) #22 Krt10 (ENSMAUG00000022010) #23 Krt28 (ENSMAUG00000016117) #24 Krt27 (ENSMAUG00000010781) #25 Krt26 (ENSMAUG00000009507) #26 Krt25 (ENSMAUG00000016144) #27 Krt24 (ENSMAUG00000000934) #28 Krt222 (ENSMAUG00000009280) #29 Smarce1 (ENSMAUG00000006265) #31 Ccr7 (ENSMAUG00000021249) #32 Tns4 (ENSMAUG00000016240) #33 Igfbp4 (ENSMAUG00000008494) Top2a (ENSMAUG00000010103) #34 Rara (ENSMAUG00000014473) #36 Cdc6 (ENSMAUG00000004369) #37 Wipf2 (ENSMAUG00000002857) Chinese hamster chok1gshd MODERN SPECIES 33 ENSCGRG00001012466 #9 ENSCGRG00001024559 #9 ENSCGRG00001003344 #9 ENSCGRG00001012468 #13 ENSCGRG00001021738 #13 ENSCGRG00001009734 #13 Krtap9-3 (ENSCGRG00001007897) #13 Krtap3-1 (ENSCGRG00001004619) #14 Gm11939 (ENSCGRG00001005088) #15 ENSCGRG00001006304 #17 ENSCGRG00001012848 #17 Krt40 (ENSCGRG00001000083) #18 Krt39 (ENSCGRG00001019993) #19 Krt23 (ENSCGRG00001000115) #20 Krt20 (ENSCGRG00001022236) #21 Krt12 (ENSCGRG00001000815) #22 Krt10 (ENSCGRG00001006589) #23 Krt28 (ENSCGRG00001010998) #24 Krt27 (ENSCGRG00001020156) #25 Krt26 (ENSCGRG00001023067) #26 Krt25 (ENSCGRG00001019023) #27 Krt24 (ENSCGRG00001016600) #28 Krt222 (ENSCGRG00001001412) #29 Smarce1 (ENSCGRG00001010211) #31 Ccr7 (ENSCGRG00001022917) #32 Tns4 (ENSCGRG00001016573) #33 Igfbp4 (ENSCGRG00001002713) Top2a (ENSCGRG00001020913) #34 Gjd3 (ENSCGRG00001008548) Rara (ENSCGRG00001021724) #36 CDC6 (ENSCGRG00001023158) #37 Murinae ANCESTRAL SPECIES 6 ENSGT00940000164263 ENSGT00940000159486.f.f.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000160295.ib.a #13 ENSGT00940000160295.ib.b.b.b #13 ENSGT00940000160295.ib.b.a #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Mus ANCESTRAL SPECIES 2 ENSGT00940000159486.f.e.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433.fb.b #9 ENSGT00940000155433.fb.a #9 ENSGT00940000160295.ib.a #13 ENSGT00940000160295.ib.b.b.b #13 ENSGT00940000160295.ib.b.a #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000159486.f.e.a.a.a ENSGT00940000155433.fb.b.a #9 ENSGT00940000155433.fb.a #9 ENSGT00940000155433.fb.b.b #9 ENSGT00940000160295.ib.a #13 ENSGT00940000160295.ib.b.b.b #13 ENSGT00940000160295.ib.b.a #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000163416 ENSGT00840000130699.b ENSGT00840000130699.a.b ENSGT00940000155433.fb.b.b #9 ENSGT00940000160295.ib.a #13 ENSGT00940000160295.ib.b.b.b #13 ENSGT00940000160295.ib.b.a #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Mouse MODERN SPECIES 2 Krtap2-4 (ENSMUSG00000060756) #9 Gm11937 (ENSMUSG00000058725) #9 Gm11938 (ENSMUSG00000057674) #9 Krtap9-3 (ENSMUSG00000049809) #13 Krtap1-3 (ENSMUSG00000078131) #13 Krtap1-4 (ENSMUSG00000075567) #13 Krtap1-5 (ENSMUSG00000047253) Krtap3-1 (ENSMUSG00000047564) #14 Gm11939 (ENSMUSG00000078132) #15 Krtap3-2 (ENSMUSG00000069721) #17 Krtap3-3 (ENSMUSG00000069722) #17 Krt40 (ENSMUSG00000059169) #18 Krt39 (ENSMUSG00000064165) #19 Krt23 (ENSMUSG00000006777) #20 Krt20 (ENSMUSG00000035775) #21 Krt12 (ENSMUSG00000020912) #22 Krt10 (ENSMUSG00000019761) #23 Krt28 (ENSMUSG00000055937) #24 Krt27 (ENSMUSG00000017588) #25 Krt26 (ENSMUSG00000075570) #26 Krt25 (ENSMUSG00000035831) #27 Krt24 (ENSMUSG00000020913) #28 Krt222 (ENSMUSG00000035849) #29 Smarce1 (ENSMUSG00000037935) #31 Ccr7 (ENSMUSG00000037944) #32 Tns4 (ENSMUSG00000017607) #33 Igfbp4 (ENSMUSG00000017493) Top2a (ENSMUSG00000020914) #34 Gjd3 (ENSMUSG00000047197) Rara (ENSMUSG00000037992) #36 Cdc6 (ENSMUSG00000017499) #37 Mus_C ANCESTRAL SPECIES 3 ENSGT00940000159486.f.f.b.a ENSGT00940000154448.b.b.a.b.b.a ENSGT00940000154448.b.b.a.a.b ENSGT00940000155433.fb.a #9 ENSGT00940000160295.ib.a #13 ENSGT00940000160295.ib.b.b.b #13 ENSGT00940000160295.ib.b.a #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Steppe mouse MODERN SPECIES 2890 ENSMSIG00000025810 ENSMSIG00000025818 ENSMSIG00000025826 Krtap2-4 (ENSMSIG00000025829) #9 Krtap9-3 (ENSMSIG00000025835) #13 Krtap1-3 (ENSMSIG00000025841) #13 Krtap1-4 (ENSMSIG00000025846) #13 Krtap1-5 (ENSMSIG00000025851) Krtap3-1 (ENSMSIG00000025854) #14 Gm11939 (ENSMSIG00000025860) #15 ENSMSIG00000025863 #17 Krt40 (ENSMSIG00000025867) #18 Krt39 (ENSMSIG00000025878) #19 Krt23 (ENSMSIG00000025887) #20 Krt20 (ENSMSIG00000025894) #21 Krt12 (ENSMSIG00000025906) #22 Krt10 (ENSMSIG00000025917) #23 Krt28 (ENSMSIG00000025924) #24 Krt27 (ENSMSIG00000025937) #25 Krt26 (ENSMSIG00000025947) #26 Krt25 (ENSMSIG00000025951) #27 Krt24 (ENSMSIG00000025961) #28 Krt222 (ENSMSIG00000025974) #29 ENSMSIG00000025987 #31 ENSMSIG00000026011 Ccr7 (ENSMSIG00000026032) #32 Tns4 (ENSMSIG00000026039) #33 Igfbp4 (ENSMSIG00000026061) Top2a (ENSMSIG00000026083) #34 Gjd3 (ENSMSIG00000026168) Rara (ENSMSIG00000026176) #36 spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0017976 MGP_SPRETEiJ_G0017975 #9 MGP_SPRETEiJ_G0017974 #9 Krtap9-3 (MGP_SPRETEiJ_G0017973) #13 Krtap1-3 (MGP_SPRETEiJ_G0017972) #13 Krtap1-4 (MGP_SPRETEiJ_G0017971) #13 Krtap1-5 (MGP_SPRETEiJ_G0017970) Krtap3-1 (MGP_SPRETEiJ_G0017969) #14 Gm11939 (MGP_SPRETEiJ_G0017968) #15 MGP_SPRETEiJ_G0017967 ##17 MGP_SPRETEiJ_G0017966 #17 Krt40 (MGP_SPRETEiJ_G0017965) #18 Krt39 (MGP_SPRETEiJ_G0017964) #19 Krt23 (MGP_SPRETEiJ_G0017963) #20 Krt20 (MGP_SPRETEiJ_G0017962) #21 Krt12 (MGP_SPRETEiJ_G0017961) #22 Krt10 (MGP_SPRETEiJ_G0017960) #23 Krt28 (MGP_SPRETEiJ_G0017959) #24 Krt27 (MGP_SPRETEiJ_G0017958) #25 Krt26 (MGP_SPRETEiJ_G0017957) #26 Krt25 (MGP_SPRETEiJ_G0017956) #27 Krt24 (MGP_SPRETEiJ_G0017955) #28 Krt222 (MGP_SPRETEiJ_G0017954) #29 Smarce1 (MGP_SPRETEiJ_G0017953) #31 Ccr7 (MGP_SPRETEiJ_G0017952) #32 Tns4 (MGP_SPRETEiJ_G0017951) #33 Igfbp4 (MGP_SPRETEiJ_G0017950) Top2a (MGP_SPRETEiJ_G0017949) #34 Gjd3 (MGP_SPRETEiJ_G0017948) Rara (MGP_SPRETEiJ_G0017947) #36 Cdc6 (MGP_SPRETEiJ_G0017946) #37 Ryukyu mouse MODERN SPECIES 2 MGP_CAROLIEiJ_G0017132 #9 MGP_CAROLIEiJ_G0017131 #9 Gm11938 (MGP_CAROLIEiJ_G0017130) #9 Krtap9-3 (MGP_CAROLIEiJ_G0017129) #13 Krtap1-3 (MGP_CAROLIEiJ_G0017128) #13 Krtap1-4 (MGP_CAROLIEiJ_G0017127) #13 Krtap1-5 (MGP_CAROLIEiJ_G0017126) Krtap3-1 (MGP_CAROLIEiJ_G0017125) #14 Gm11939 (MGP_CAROLIEiJ_G0017124) #15 MGP_CAROLIEiJ_G0017123 #17 MGP_CAROLIEiJ_G0017122 #17 Krt40 (MGP_CAROLIEiJ_G0017121) #18 Krt39 (MGP_CAROLIEiJ_G0017120) #19 Krt23 (MGP_CAROLIEiJ_G0017119) #20 Krt20 (MGP_CAROLIEiJ_G0017118) #21 Krt12 (MGP_CAROLIEiJ_G0017117) #22 Krt10 (MGP_CAROLIEiJ_G0017116) #23 Krt28 (MGP_CAROLIEiJ_G0017115) #24 Krt27 (MGP_CAROLIEiJ_G0017114) #25 Krt26 (MGP_CAROLIEiJ_G0017113) #26 Krt25 (MGP_CAROLIEiJ_G0017112) #27 Krt24 (MGP_CAROLIEiJ_G0017111) #28 Krt222 (MGP_CAROLIEiJ_G0017110) #29 Smarce1 (MGP_CAROLIEiJ_G0017109) #31 Ccr7 (MGP_CAROLIEiJ_G0017108) #32 Tns4 (MGP_CAROLIEiJ_G0017107) #33 Igfbp4 (MGP_CAROLIEiJ_G0017106) Top2a (MGP_CAROLIEiJ_G0017105) #34 Gjd3 (MGP_CAROLIEiJ_G0017104) Rara (MGP_CAROLIEiJ_G0017103) #36 Cdc6 (MGP_CAROLIEiJ_G0017102) #37 Shrew mouse MODERN SPECIES 5 MGP_PahariEiJ_G0018261 #9 MGP_PahariEiJ_G0018260 #9 MGP_PahariEiJ_G0018259 #9 Krtap9-3 (MGP_PahariEiJ_G0018258) #13 MGP_PahariEiJ_G0018257 #13 Krtap1-4 (MGP_PahariEiJ_G0018256) #13 Krtap1-5 (MGP_PahariEiJ_G0018255) Krtap3-1 (MGP_PahariEiJ_G0018254) #14 Gm11939 (MGP_PahariEiJ_G0018253) #15 MGP_PahariEiJ_G0018252 #17 MGP_PahariEiJ_G0018251 #17 Krt40 (MGP_PahariEiJ_G0018250) #18 Krt39 (MGP_PahariEiJ_G0018249) #19 Krt23 (MGP_PahariEiJ_G0018248) #20 Krt20 (MGP_PahariEiJ_G0018247) #21 Krt12 (MGP_PahariEiJ_G0018246) #22 Krt10 (MGP_PahariEiJ_G0018245) #23 MGP_PahariEiJ_G0018244 #24 Krt27 (MGP_PahariEiJ_G0018243) #25 Krt26 (MGP_PahariEiJ_G0018242) #26 Krt25 (MGP_PahariEiJ_G0018241) #27 Krt24 (MGP_PahariEiJ_G0018240) #28 Krt222 (MGP_PahariEiJ_G0018239) #29 Smarce1 (MGP_PahariEiJ_G0018238) #31 Ccr7 (MGP_PahariEiJ_G0018237) #32 Tns4 (MGP_PahariEiJ_G0018236) #33 MGP_PahariEiJ_G0018235 Top2a (MGP_PahariEiJ_G0018234) #34 Gjd3 (MGP_PahariEiJ_G0018233) Rara (MGP_PahariEiJ_G0018232) #36 Cdc6 (MGP_PahariEiJ_G0018231) #37 Rat MODERN SPECIES 1 Krtap2-4l (ENSRNOG00000060847) #9 Krtap2-1 (ENSRNOG00000065269) #9 RGD1561684 (ENSRNOG00000063772) #9 LOC100365588 (ENSRNOG00000053283) #13 Krtap1-3 (ENSRNOG00000052388) #13 Krtap1-1 (ENSRNOG00000012955) #13 Krtap1-5 (ENSRNOG00000054186) Krtap3-1 (ENSRNOG00000012544) #14 LOC120095334 (ENSRNOG00000060205) #15 Krtap3-2 (ENSRNOG00000049383) #17 Krtap3-3 (ENSRNOG00000045678) #17 Krt40 (ENSRNOG00000013896) #18 Krt39 (ENSRNOG00000031422) #19 Krt23 (ENSRNOG00000011907) #20 Krt20 (ENSRNOG00000027139) #21 Krt12 (ENSRNOG00000011986) #22 Krt10 (ENSRNOG00000030170) #23 Krt28 (ENSRNOG00000011846) #24 Krt27 (ENSRNOG00000011628) #25 Krt26 (ENSRNOG00000033617) #26 Krt25 (ENSRNOG00000011196) #27 Krt24 (ENSRNOG00000010970) #28 Krt222 (ENSRNOG00000010839) #29 Smarce1 (ENSRNOG00000010676) #31 Ccr7 (ENSRNOG00000010665) #32 Tns4 (ENSRNOG00000027350) #33 Igfbp4 (ENSRNOG00000010635) Top2a (ENSRNOG00000053047) #34 Gjd3 (ENSRNOG00000051691) Rara (ENSRNOG00000009972) #36 Cdc6 (ENSRNOG00000027787) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 912 ENSNGAG00000014947 #9 ENSNGAG00000015529 #9 ENSNGAG00000015518 #9 ENSNGAG00000016313 #9 ENSNGAG00000015404 #13 ENSNGAG00000011138 #13 Krtap1-4 (ENSNGAG00000014313) #13 Krtap1-5 (ENSNGAG00000013189) Krtap3-1 (ENSNGAG00000014967) #14 ENSNGAG00000014681 #17 ENSNGAG00000015155 #17 Krt40 (ENSNGAG00000002573) #18 Krt39 (ENSNGAG00000017057) #19 Krt23 (ENSNGAG00000003686) #20 Krt20 (ENSNGAG00000012272) #21 Krt12 (ENSNGAG00000017518) #22 Krt10 (ENSNGAG00000017006) #23 Krt28 (ENSNGAG00000020295) #24 Krt27 (ENSNGAG00000019608) #25 Krt26 (ENSNGAG00000010579) #26 Krt25 (ENSNGAG00000000113) #27 Krt24 (ENSNGAG00000017103) #28 Krt222 (ENSNGAG00000014550) #29 ENSNGAG00000015419 #31 Ccr7 (ENSNGAG00000010036) #32 Lesser Egyptian jerboa MODERN SPECIES 56 ENSJJAG00000022802 ENSJJAG00000021359 ENSJJAG00000021927 ENSJJAG00000022794 ENSJJAG00000006288 #9 ENSJJAG00000005972 #9 ENSJJAG00000022051 #13 ENSJJAG00000006226 #13 Krtap3-1 (ENSJJAG00000006011) #14 ENSJJAG00000006371 #17 ENSJJAG00000006041 #17 Krt40 (ENSJJAG00000022059) #18 Krt39 (ENSJJAG00000021955) #19 Krt23 (ENSJJAG00000022215) #20 Krt20 (ENSJJAG00000022728) #21 Krt12 (ENSJJAG00000021975) #22 Krt10 (ENSJJAG00000022778) #23 Krt28 (ENSJJAG00000022837) #24 Krt27 (ENSJJAG00000023044) #25 Krt26 (ENSJJAG00000009739) #26 Krt25 (ENSJJAG00000023627) #27 Krt24 (ENSJJAG00000023143) #28 Krt222 (ENSJJAG00000021966) #29 Smarce1 (ENSJJAG00000023161) #31 Ccr7 (ENSJJAG00000002196) #32 Tns4 (ENSJJAG00000003969) #33 Igfbp4 (ENSJJAG00000000680) Top2a (ENSJJAG00000007045) #34 Gjd3 (ENSJJAG00000009539) Rara (ENSJJAG00000001668) #36 Cdc6 (ENSJJAG00000022817) #37 Rodentia_A ANCESTRAL SPECIES 3 ENSGT00940000163931 ENSGT00940000154448.b.b.b.b.e.a ENSGT00940000159486.e.a ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Sciuridae ANCESTRAL SPECIES 4 ENSGT00940000163658 ENSGT00940000164459 ENSGT00940000156135 ENSGT00940000163931 ENSGT00940000155433 #9 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005002182 #9 ENSSVLG00005002196 #9 ENSSVLG00005002212 ENSSVLG00005002228 #13 ENSSVLG00005002240 #13 ENSSVLG00005002256 #13 KRTAP3-1 (ENSSVLG00005002274) #14 ENSSVLG00005002286 #15 ENSSVLG00005002295 #17 ENSSVLG00005002312 #17 KRT40 (ENSSVLG00005002328) #18 KRT39 (ENSSVLG00005002361) #19 KRT23 (ENSSVLG00005002405) #20 KRT20 (ENSSVLG00005002465) #21 ENSSVLG00005002497 #22 ENSSVLG00005002521 #22 KRT10 (ENSSVLG00005002550) #23 KRT28 (ENSSVLG00005002575) #24 KRT27 (ENSSVLG00005002600) #25 KRT26 (ENSSVLG00005002624) #26 KRT25 (ENSSVLG00005002659) #27 KRT24 (ENSSVLG00005002690) #28 ENSSVLG00005002717 ENSSVLG00005002734 KRT222 (ENSSVLG00005002764) #29 SMARCE1 (ENSSVLG00005002799) #31 CCR7 (ENSSVLG00005002834) #32 TNS4 (ENSSVLG00005002865) #33 IGFBP4 (ENSSVLG00005002915) TOP2A (ENSSVLG00005002957) #34 GJD3 (ENSSVLG00005002978) Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005002159 #9 ENSSVLG00005002182 #9 ENSSVLG00005002196 #9 ENSSVLG00005002212 ENSSVLG00005002228 #13 ENSSVLG00005002240 #13 ENSSVLG00005002256 #13 KRTAP3-1 (ENSSVLG00005002274) #14 ENSSVLG00005002286 #15 ENSSVLG00005002295 #17 ENSSVLG00005002312 #17 KRT40 (ENSSVLG00005002328) #18 KRT39 (ENSSVLG00005002361) #19 KRT23 (ENSSVLG00005002405) #20 KRT20 (ENSSVLG00005002465) #21 ENSSVLG00005002497 #22 ENSSVLG00005002521 #22 KRT10 (ENSSVLG00005002550) #23 KRT28 (ENSSVLG00005002575) #24 KRT27 (ENSSVLG00005002600) #25 KRT26 (ENSSVLG00005002624) #26 KRT25 (ENSSVLG00005002659) #27 KRT24 (ENSSVLG00005002690) #28 ENSSVLG00005002717 ENSSVLG00005002734 KRT222 (ENSSVLG00005002764) #29 SMARCE1 (ENSSVLG00005002799) #31 CCR7 (ENSSVLG00005002834) #32 TNS4 (ENSSVLG00005002865) #33 IGFBP4 (ENSSVLG00005002915) TOP2A (ENSSVLG00005002957) #34 Marmotini ANCESTRAL SPECIES 8 ENSGT00940000161991 ENSGT00940000153980.j.a.b.b.c.a ENSGT00940000163426 ENSGT00940000153980.j.a.b.b.c.b ENSGT00940000153980.j.a.b.b.d ENSGT00860000136155 ENSGT00940000163658 ENSGT00940000164459 ENSGT00390000001157.B #15 ENSGT00390000001157.C.gc.b #17 ENSGT00390000001157.C.gc.a #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Marmotini_b ANCESTRAL SPECIES 5 ENSGT00940000153980.j.a.b.b.c.a ENSGT00940000153980.j.a.a ENSGT00940000153980.j.a.b.b.c.b ENSGT00940000153980.j.a.b.b.d ENSGT00940000163416 ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.B #15 ENSGT00390000001157.C.gc.b #17 ENSGT00390000001157.C.gc.a #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Arctic ground squirrel MODERN SPECIES 46 KRTAP16-1 (ENSUPAG00010008810) KRTAP29-1 (ENSUPAG00010008797) ENSUPAG00010008769 ENSUPAG00010008754 ENSUPAG00010008750 ENSUPAG00010008626 #13 ENSUPAG00010008623 ENSUPAG00010008620 ##17 ENSUPAG00010008616 #15 ENSUPAG00010008611 #17 ENSUPAG00010008604 #17 KRT40 (ENSUPAG00010008559) #18 KRT39 (ENSUPAG00010008539) #19 KRT23 (ENSUPAG00010008531) #20 KRT20 (ENSUPAG00010008517) #21 KRT12 (ENSUPAG00010008495) #22 KRT10 (ENSUPAG00010008483) #23 KRT28 (ENSUPAG00010008467) #24 KRT27 (ENSUPAG00010008459) #25 KRT26 (ENSUPAG00010008447) #26 KRT25 (ENSUPAG00010008441) #27 KRT24 (ENSUPAG00010008434) #28 KRT222 (ENSUPAG00010008427) #29 SMARCE1 (ENSUPAG00010008422) #31 CCR7 (ENSUPAG00010008418) #32 TNS4 (ENSUPAG00010008407) #33 IGFBP4 (ENSUPAG00010008401) TOP2A (ENSUPAG00010008363) #34 RARA (ENSUPAG00010008330) #36 CDC6 (ENSUPAG00010008314) #37 WIPF2 (ENSUPAG00010008280) Squirrel MODERN SPECIES 90 ENSSTOG00000013195 ENSSTOG00000031988 ENSSTOG00000032994 ENSSTOG00000033084 ENSSTOG00000027734 #9 ENSSTOG00000023947 #9 ENSSTOG00000029114 #9 ENSSTOG00000021731 #9 ENSSTOG00000012673 #13 ENSSTOG00000012507 ENSSTOG00000027131 ##17 ENSSTOG00000025033 #17 ENSSTOG00000019917 #17 KRT39 (ENSSTOG00000013190) #19 KRT23 (ENSSTOG00000013795) #20 KRT12 (ENSSTOG00000013295) #22 KRT10 (ENSSTOG00000002204) #23 KRT28 (ENSSTOG00000032131) #24 KRT27 (ENSSTOG00000002187) #25 KRT26 (ENSSTOG00000034065) #26 KRT25 (ENSSTOG00000002183) #27 KRT24 (ENSSTOG00000002178) #28 KRT222 (ENSSTOG00000029003) #29 SMARCE1 (ENSSTOG00000002175) #31 CCR7 (ENSSTOG00000001864) #32 TNS4 (ENSSTOG00000004876) #33 IGFBP4 (ENSSTOG00000029166) TOP2A (ENSSTOG00000004794) #34 GJD3 (ENSSTOG00000019754) RARA (ENSSTOG00000004746) #36 CDC6 (ENSSTOG00000004716) #37 Alpin marmot MODERN SPECIES 42 ENSMMMG00000006802 ENSMMMG00000007015 KRTAP16-1 (ENSMMMG00000007017) ENSMMMG00000007037 ENSMMMG00000007061 ENSMMMG00000007085 ENSMMMG00000007146 ENSMMMG00000007150 ##17 ENSMMMG00000007156 #15 ENSMMMG00000007160 #17 ENSMMMG00000007167 #17 KRT40 (ENSMMMG00000007173) #18 KRT39 (ENSMMMG00000007199) #19 KRT23 (ENSMMMG00000007227) #20 KRT20 (ENSMMMG00000007239) #21 KRT12 (ENSMMMG00000007259) #22 KRT10 (ENSMMMG00000007279) #23 KRT28 (ENSMMMG00000007288) #24 KRT27 (ENSMMMG00000007294) #25 KRT26 (ENSMMMG00000007307) #26 KRT25 (ENSMMMG00000007316) #27 KRT24 (ENSMMMG00000007326) #28 KRT222 (ENSMMMG00000007351) #29 SMARCE1 (ENSMMMG00000007365) #31 CCR7 (ENSMMMG00000007384) #32 TNS4 (ENSMMMG00000007390) #33 IGFBP4 (ENSMMMG00000007401) TOP2A (ENSMMMG00000007405) #34 RARA (ENSMMMG00000007451) #36 CDC6 (ENSMMMG00000007492) #37 WIPF2 (ENSMMMG00000007511) Hystricomorpha ANCESTRAL SPECIES 3 ENSGT00940000163658 ENSGT00940000156135 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000159486.f ENSGT00940000164263 ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00390000018397 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153980.j.a.a ENSGT00940000163658 ENSGT00940000156135 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000163931 ENSGT00940000159486.e.a ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00390000018397 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153980.j.a.a ENSGT00940000163658 ENSGT00940000156135 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000163931 ENSGT00940000159486.e.a ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00390000018397 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Long-tailed chinchilla MODERN SPECIES 158 ENSCLAG00000015082 ENSCLAG00000017906 ENSCLAG00000015077 ENSCLAG00000015152 ENSCLAG00000018011 #9 ENSCLAG00000013798 #9 ENSCLAG00000018055 #13 ENSCLAG00000015264 #13 ENSCLAG00000017986 #13 ENSCLAG00000018003 KRTAP3-1 (ENSCLAG00000017980) #14 ENSCLAG00000017863 #17 KRT40 (ENSCLAG00000014940) #18 KRT39 (ENSCLAG00000013824) #19 KRT23 (ENSCLAG00000014628) #20 KRT12 (ENSCLAG00000015867) #22 KRT10 (ENSCLAG00000017300) #23 KRT26 (ENSCLAG00000016281) #26 KRT28 (ENSCLAG00000015353) #24 KRT24 (ENSCLAG00000015192) #28 KRT222 (ENSCLAG00000016700) #29 SMARCE1 (ENSCLAG00000015303) #31 CCR7 (ENSCLAG00000016277) #32 TNS4 (ENSCLAG00000013766) #33 IGFBP4 (ENSCLAG00000015611) ENSCLAG00000016494 TOP2A (ENSCLAG00000014772) #34 RARA (ENSCLAG00000016604) #36 CDC6 (ENSCLAG00000015306) #37 WIPF2 (ENSCLAG00000015019) RAPGEFL1 (ENSCLAG00000013660) Degu MODERN SPECIES 97 KRTAP16-1 (ENSODEG00000017880) ENSODEG00000017810 ENSODEG00000017804 ENSODEG00000017801 ENSODEG00000017790 ENSODEG00000017966 ENSODEG00000017878 ENSODEG00000020458 #9 ENSODEG00000017796 #13 KRTAP3-1 (ENSODEG00000020553) #14 ENSODEG00000020535 #17 ENSODEG00000020505 #17 KRT40 (ENSODEG00000017770) #18 KRT39 (ENSODEG00000017870) #19 KRT23 (ENSODEG00000017766) #20 KRT12 (ENSODEG00000017798) #22 KRT10 (ENSODEG00000018133) #23 KRT28 (ENSODEG00000017869) #24 KRT27 (ENSODEG00000017814) #25 KRT26 (ENSODEG00000017748) #26 KRT25 (ENSODEG00000017866) #27 KRT24 (ENSODEG00000017754) #28 KRT222 (ENSODEG00000017765) #29 ENSODEG00000017812 #31 CCR7 (ENSODEG00000017849) #32 TNS4 (ENSODEG00000017791) #33 IGFBP4 (ENSODEG00000017749) RDM1 (ENSODEG00000017788) TOP2A (ENSODEG00000018034) #34 GJD3 (ENSODEG00000017680) RARA (ENSODEG00000017623) #36 Guinea pig MODERN SPECIES 53 ENSCPOG00000039942 ENSCPOG00000031771 ENSCPOG00000040575 #9 ENSCPOG00000037983 #9 ENSCPOG00000030187 #9 ENSCPOG00000034760 #13 ENSCPOG00000031237 #13 ENSCPOG00000038991 #13 ENSCPOG00000009368 KRTAP3-1 (ENSCPOG00000011046) #14 ENSCPOG00000038722 #17 ENSCPOG00000011044 #17 KRT40 (ENSCPOG00000011037) #18 KRT39 (ENSCPOG00000011033) #19 KRT23 (ENSCPOG00000011030) #20 ENSCPOG00000034129 #22 ENSCPOG00000033395 #23 ENSCPOG00000036632 #23 KRT28 (ENSCPOG00000033049) #24 KRT27 (ENSCPOG00000030964) #25 KRT26 (ENSCPOG00000038591) #26 KRT25 (ENSCPOG00000000495) #27 KRT24 (ENSCPOG00000032839) #28 KRT222 (ENSCPOG00000023380) #29 SMARCE1 (ENSCPOG00000000173) #31 CCR7 (ENSCPOG00000031024) #32 TNS4 (ENSCPOG00000010254) #33 IGFBP4 (ENSCPOG00000008055) ENSCPOG00000001495 TOP2A (ENSCPOG00000006799) #34 GJD3 (ENSCPOG00000039750) Naked mole-rat female MODERN SPECIES 12 ENSHGLG00000033664 ENSHGLG00000011418 ENSHGLG00000046541 ENSHGLG00000048443 ENSHGLG00000016152 ENSHGLG00000036467 ENSHGLG00000045568 #13 ENSHGLG00000020641 KRTAP3-1 (ENSHGLG00000020885) #14 ENSHGLG00000044225 #15 ENSHGLG00000049120 #17 ENSHGLG00000032503 #17 KRT40 (ENSHGLG00000014814) #18 KRT39 (ENSHGLG00000009907) #19 KRT23 (ENSHGLG00000012804) #20 KRT12 (ENSHGLG00000014783) #22 KRT10 (ENSHGLG00000010577) #23 KRT28 (ENSHGLG00000012817) #24 KRT26 (ENSHGLG00000018049) #26 KRT25 (ENSHGLG00000016382) #27 KRT24 (ENSHGLG00000016476) #28 KRT222 (ENSHGLG00000014433) #29 SMARCE1 (ENSHGLG00000014523) #31 ENSHGLG00000031415 CCR7 (ENSHGLG00000009998) #32 TNS4 (ENSHGLG00000011575) #33 IGFBP4 (ENSHGLG00000009899) ENSHGLG00000011280 TOP2A (ENSHGLG00000012875) #34 GJD3 (ENSHGLG00000014304) RARA (ENSHGLG00000038969) #36 Lagomorpha ANCESTRAL SPECIES ENSGT00940000163931 ENSGT00940000159486.f ENSGT00940000164263 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000159486.e.a ENSGT00940000155433 #9 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Rabbit MODERN SPECIES 10 ENSOCUG00000036372 ENSOCUG00000021896 ENSOCUG00000031432 ENSOCUG00000030603 ENSOCUG00000032281 ENSOCUG00000036283 #13 ENSOCUG00000008528 #13 ENSOCUG00000029827 KRTAP3-1 (ENSOCUG00000015615) #14 ENSOCUG00000031203 #15 ENSOCUG00000024778 #17 ENSOCUG00000024352 #17 KRT40 (ENSOCUG00000015603) #18 KRT39 (ENSOCUG00000015593) #19 KRT23 (ENSOCUG00000017694) #20 KRT12 (ENSOCUG00000017689) #22 KRT28 (ENSOCUG00000015132) #24 KRT10 (ENSOCUG00000011731) #23 KRT26 (ENSOCUG00000008999) #26 KRT25 (ENSOCUG00000008992) #27 KRT222 (ENSOCUG00000027447) #29 SMARCE1 (ENSOCUG00000008981) #31 CCR7 (ENSOCUG00000025569) #32 TNS4 (ENSOCUG00000002830) #33 IGFBP4 (ENSOCUG00000002828) TOP2A (ENSOCUG00000002814) #34 GJD3 (ENSOCUG00000004916) RARA (ENSOCUG00000004903) #36 CDC6 (ENSOCUG00000004898) #37 ENSOCUG00000029564 RAPGEFL1 (ENSOCUG00000023409) Pika MODERN SPECIES 4691 KRT23 (ENSOPRG00000009842) #20 KRT20 (ENSOPRG00000009828) #21 KRT12 (ENSOPRG00000009810) #22 ENSOPRG00000009788 #23 ENSOPRG00000018471 #24 KRT27 (ENSOPRG00000009774) #25 KRT26 (ENSOPRG00000009761) #26 KRT25 (ENSOPRG00000009745) #27 KRT24 (ENSOPRG00000009728) #28 KRT222 (ENSOPRG00000018441) #29 Tree shrew MODERN SPECIES 4713 KRT20 (ENSTBEG00000016636) #21 KRT12 (ENSTBEG00000016553) #22 Primates ANCESTRAL SPECIES 3 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163931 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT00940000164415 #30 ENSGT00390000003628.b.c.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Haplorrhini ANCESTRAL SPECIES 6 ENSGT00940000156135 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163931 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT00940000164415 #30 ENSGT00390000003628.b.c.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Simiiformes ANCESTRAL SPECIES 7 ENSGT00940000156135.h ENSGT00940000164350.B ENSGT00940000164263 ENSGT00940000163931 ENSGT00940000159486 ENSGT00940000163975 ENSGT00940000154448.b.b.b.b ENSGT00940000162736 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d.p.b #31 ENSGT00940000164415 #30 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Catarrhini ANCESTRAL SPECIES 8 ENSGT00940000163975 ENSGT00940000165435 ENSGT00940000154448.b.b.b.b ENSGT00940000164350.B ENSGT00940000164350.A ENSGT00940000165697 ENSGT00940000162736 ENSGT00940000160443.o ENSGT00940000160443.p ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Hominoidea ANCESTRAL SPECIES 13 ENSGT00940000164350.A ENSGT00940000164350.B ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000160443.o.a ENSGT00940000160443.o.b.a ENSGT00940000160443.p ENSGT00940000160443.o.b.b ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Hominidae ANCESTRAL SPECIES 16 ENSGT00940000164350.B ENSGT00940000154448.b.b.b.b ENSGT00940000165435 ENSGT00940000163975.e.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000160443.o.a ENSGT00940000160443.p ENSGT00940000160443.o.b.b ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 1 ENSGT00940000163975.e.b ENSGT00940000163975.e.a.b ENSGT00940000163975.e.a.a ENSGT00940000159486 ENSGT00940000162736.w.a ENSGT00940000160443.o.a ENSGT00940000160443.o.b.a ENSGT00940000160443.p ENSGT00940000160443.o.b.b ENSGT00390000001157.A.b #14 ENSGT00390000001157.C.x #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Gorilla MODERN SPECIES 18 ENSGGOG00000043973 ENSGGOG00000036943 ENSGGOG00000038087 ENSGGOG00000040059 ENSGGOG00000041957 KRTAP1-1 (ENSGGOG00000016411) KRTAP1-3 (ENSGGOG00000008142) ENSGGOG00000027718 KRTAP3-1 (ENSGGOG00000025337) #14 ENSGGOG00000043613 #17 ENSGGOG00000038810 #17 KRT40 (ENSGGOG00000006511) #18 KRT39 (ENSGGOG00000017063) #19 KRT23 (ENSGGOG00000025840) #20 KRT20 (ENSGGOG00000004278) #21 KRT12 (ENSGGOG00000004274) #22 ENSGGOG00000038478 KRT10 (ENSGGOG00000000457) #23 KRT28 (ENSGGOG00000009707) #24 KRT27 (ENSGGOG00000013291) #25 KRT26 (ENSGGOG00000011236) #26 KRT25 (ENSGGOG00000043356) #27 KRT24 (ENSGGOG00000009695) #28 KRT222 (ENSGGOG00000013714) #29 SMARCE1 (ENSGGOG00000011803) #31 CCR7 (ENSGGOG00000016340) #32 TNS4 (ENSGGOG00000009684) #33 IGFBP4 (ENSGGOG00000009883) TOP2A (ENSGGOG00000012704) #34 GJD3 (ENSGGOG00000003119) ENSGGOG00000003114 #36 Homo/Pan group ANCESTRAL SPECIES 2 ENSGT00940000163975.e.a.b ENSGT00940000163975.e.a.a ENSGT00940000159486 ENSGT00940000162736.w.a ENSGT00940000160443.o.a ENSGT00940000160443.o.b.a ENSGT00940000160443.p ENSGT00940000160443.o.b.b ENSGT00390000001157.A.b #14 ENSGT00390000001157.C.x #17 ENSGT00390000001157.C.w #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Human MODERN SPECIES 8 KRTAP2-4 (ENSG00000213417) KRTAP2-3 (ENSG00000212724) KRTAP2-2 (ENSG00000214518) KRTAP2-1 (ENSG00000212725) KRTAP1-1 (ENSG00000188581) KRTAP1-3 (ENSG00000221880) KRTAP1-4 (ENSG00000204887) KRTAP1-5 (ENSG00000221852) KRTAP3-1 (ENSG00000212901) #14 KRTAP3-2 (ENSG00000212900) #17 KRTAP3-3 (ENSG00000212899) #17 KRT40 (ENSG00000204889) #18 KRT39 (ENSG00000196859) #19 KRT23 (ENSG00000108244) #20 KRT20 (ENSG00000171431) #21 KRT12 (ENSG00000187242) #22 KRT10 (ENSG00000186395) #23 KRT28 (ENSG00000173908) #24 KRT27 (ENSG00000171446) #25 KRT26 (ENSG00000186393) #26 KRT25 (ENSG00000204897) #27 KRT24 (ENSG00000167916) #28 KRT222 (ENSG00000213424) #29 SMARCE1 (ENSG00000073584) #31 CCR7 (ENSG00000126353) #32 TNS4 (ENSG00000131746) #33 IGFBP4 (ENSG00000141753) TOP2A (ENSG00000131747) #34 GJD3 (ENSG00000183153) RARA (ENSG00000131759) #36 CDC6 (ENSG00000094804) #37 Pan ANCESTRAL SPECIES 3 ENSGT00940000165435 ENSGT00940000163975.e.b.b ENSGT00940000163975.f ENSGT00940000163975.e.b.a ENSGT00940000162736.w.a ENSGT00940000160443.o.a ENSGT00940000160443.o.b.a ENSGT00940000160443.p ENSGT00940000160443.o.b.b ENSGT00390000001157.A.b #14 ENSGT00390000001157.C.x #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Chimpanzee MODERN SPECIES 8 KRTAP4-11 (ENSPTRG00000043038) ENSPTRG00000009149 ENSPTRG00000042904 ENSPTRG00000030932 KRTAP1-1 (ENSPTRG00000042384) KRTAP1-3 (ENSPTRG00000039138) KRTAP1-4 (ENSPTRG00000043306) KRTAP1-5 (ENSPTRG00000009145) KRTAP3-1 (ENSPTRG00000009141) #14 ENSPTRG00000048871 #17 ENSPTRG00000049793 #17 KRT40 (ENSPTRG00000030928) #18 KRT39 (ENSPTRG00000023017) #19 KRT23 (ENSPTRG00000009137) #20 KRT20 (ENSPTRG00000009135) #21 KRT12 (ENSPTRG00000009134) #22 KRT10 (ENSPTRG00000009132) #23 KRT28 (ENSPTRG00000009131) #24 KRT27 (ENSPTRG00000009130) #25 KRT26 (ENSPTRG00000030927) #26 KRT25 (ENSPTRG00000009129) #27 KRT24 (ENSPTRG00000009128) #28 KRT222 (ENSPTRG00000034332) #29 SMARCE1 (ENSPTRG00000022902) #31 CCR7 (ENSPTRG00000009125) #32 TNS4 (ENSPTRG00000009124) #33 IGFBP4 (ENSPTRG00000009123) TOP2A (ENSPTRG00000009122) #34 GJD3 (ENSPTRG00000009121) RARA (ENSPTRG00000009120) #36 CDC6 (ENSPTRG00000009119) #37 Bonobo MODERN SPECIES 8 ENSPPAG00000035558 ENSPPAG00000034671 ENSPPAG00000043333 ENSPPAG00000024926 ENSPPAG00000000910 ENSPPAG00000036449 KRTAP1-1 (ENSPPAG00000017831) KRTAP1-4 (ENSPPAG00000021249) KRTAP1-5 (ENSPPAG00000012582) KRTAP3-1 (ENSPPAG00000018240) #14 ENSPPAG00000022850 #17 KRT40 (ENSPPAG00000031205) #18 KRT39 (ENSPPAG00000041593) #19 KRT23 (ENSPPAG00000030794) #20 KRT20 (ENSPPAG00000031348) #21 KRT12 (ENSPPAG00000034686) #22 KRT10 (ENSPPAG00000039195) #23 KRT28 (ENSPPAG00000027727) #24 KRT27 (ENSPPAG00000038824) #25 KRT26 (ENSPPAG00000043196) #26 KRT25 (ENSPPAG00000030815) #27 ENSPPAG00000032199 #28 KRT222 (ENSPPAG00000027422) #29 SMARCE1 (ENSPPAG00000037636) #31 CCR7 (ENSPPAG00000042341) #32 TNS4 (ENSPPAG00000028272) #33 ENSPPAG00000034557 TOP2A (ENSPPAG00000043649) #34 ENSPPAG00000043874 #36 CDC6 (ENSPPAG00000038406) #37 WIPF2 (ENSPPAG00000041889) Orangutan MODERN SPECIES 8 KRTAP4-8 (ENSPPYG00000008438) ENSPPYG00000008437 ENSPPYG00000036502 ENSPPYG00000030171 ENSPPYG00000037202 KRTAP1-1 (ENSPPYG00000008442) KRTAP1-4 (ENSPPYG00000008958) KRTAP1-5 (ENSPPYG00000008959) KRTAP3-1 (ENSPPYG00000035960) #14 ENSPPYG00000041168 #17 ENSPPYG00000035156 #17 KRT40 (ENSPPYG00000008445) #18 KRT39 (ENSPPYG00000008446) #19 KRT23 (ENSPPYG00000008447) #20 KRT20 (ENSPPYG00000030597) #21 KRT12 (ENSPPYG00000041076) #22 ENSPPYG00000008448 KRT10 (ENSPPYG00000008449) #23 KRT28 (ENSPPYG00000008450) #24 KRT27 (ENSPPYG00000008451) #25 KRT26 (ENSPPYG00000008452) #26 KRT25 (ENSPPYG00000008453) #27 KRT24 (ENSPPYG00000008454) #28 KRT222 (ENSPPYG00000008455) #29 SMARCE1 (ENSPPYG00000008456) #31 CCR7 (ENSPPYG00000008457) #32 TNS4 (ENSPPYG00000040458) #33 IGFBP4 (ENSPPYG00000039119) TOP2A (ENSPPYG00000008460) #34 GJD3 (ENSPPYG00000008461) RARA (ENSPPYG00000008462) #36 Gibbon MODERN SPECIES 9 ETV4 (ENSNLEG00000005715) ENSNLEG00000026769 ENSNLEG00000031604 ARL4D (ENSNLEG00000032904) KRTAP4-11 (ENSNLEG00000002385) KRTAP4-9 (ENSNLEG00000002384) ENSNLEG00000002382 KRTAP1-5 (ENSNLEG00000029608) KRTAP1-4 (ENSNLEG00000002379) ENSNLEG00000036039 #17 ENSNLEG00000036205 #17 KRT40 (ENSNLEG00000002340) #18 KRT39 (ENSNLEG00000002318) #19 KRT23 (ENSNLEG00000002316) #20 KRT20 (ENSNLEG00000002280) #21 KRT12 (ENSNLEG00000002251) #22 KRT10 (ENSNLEG00000002202) #23 KRT28 (ENSNLEG00000027288) #24 KRT27 (ENSNLEG00000002229) #25 KRT26 (ENSNLEG00000002206) #26 ENSNLEG00000002204 KRT25 (ENSNLEG00000002158) #27 KRT24 (ENSNLEG00000002105) #28 KRT222 (ENSNLEG00000002095) #29 SMARCE1 (ENSNLEG00000001957) #31 CCR7 (ENSNLEG00000001950) #32 TNS4 (ENSNLEG00000001944) #33 IGFBP4 (ENSNLEG00000001919) TOP2A (ENSNLEG00000001840) #34 GJD3 (ENSNLEG00000001839) RARA (ENSNLEG00000001793) #36 Cercopithecidae ANCESTRAL SPECIES 6 ENSGT00940000154448.b.b.b.b ENSGT00940000159486.y.a ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000162736 ENSGT00940000160443.o.c ENSGT00940000160443.p ENSGT00940000160443.o.d.b ENSGT00940000160443.o.d.a ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000162736.s.b.a.b ENSGT00940000162736.s.b.a.a.b ENSGT00940000162736.s.b.a.a.a ENSGT00940000160443.o.c ENSGT00940000160443.o.d.a ENSGT00940000160443.p ENSGT00940000160443.o.d.b ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Vervet Monkey MODERN SPECIES 7 KRTAP4-7 (ENSCSAG00000002851) ENSCSAG00000019029 ENSCSAG00000019030 ENSCSAG00000019031 ENSCSAG00000019032 ENSCSAG00000002849 KRTAP1-4 (ENSCSAG00000019033) ENSCSAG00000019034 KRTAP3-1 (ENSCSAG00000019035) #14 ENSCSAG00000019036 #17 ENSCSAG00000019037 #17 KRT40 (ENSCSAG00000002848) #18 KRT39 (ENSCSAG00000002844) #19 KRT23 (ENSCSAG00000002841) #20 KRT20 (ENSCSAG00000002839) #21 KRT12 (ENSCSAG00000002838) #22 KRT10 (ENSCSAG00000002835) #23 KRT28 (ENSCSAG00000002833) #24 KRT27 (ENSCSAG00000002830) #25 KRT26 (ENSCSAG00000002826) #26 KRT25 (ENSCSAG00000002820) #27 KRT24 (ENSCSAG00000002815) #28 KRT222 (ENSCSAG00000002811) #29 SMARCE1 (ENSCSAG00000002806) #31 CCR7 (ENSCSAG00000002800) #32 TNS4 (ENSCSAG00000002797) #33 IGFBP4 (ENSCSAG00000002792) ENSCSAG00000002791 TOP2A (ENSCSAG00000002790) #34 ENSCSAG00000002788 GJD3 (ENSCSAG00000019038) Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000162736.s.b.a.b ENSGT00940000154448.b.b.b.b.m.a ENSGT00940000162736.t ENSGT00940000160443.o.c ENSGT00940000160443.o.d.a ENSGT00940000160443.p ENSGT00940000160443.o.d.b ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Cercopithecinae_b ANCESTRAL SPECIES 20 ENSGT00940000164263 ENSGT00940000163931 ENSGT00940000163975 ENSGT00940000154448.b.b.b.b.m.a ENSGT00940000162736.t ENSGT00940000160443.o.c ENSGT00940000162736.s.a.a.a ENSGT00940000160443.p ENSGT00940000160443.o.d.a ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Olive baboon MODERN SPECIES 8 ENSPANG00000030200 ENSPANG00000033743 ENSPANG00000032465 ENSPANG00000021570 ENSPANG00000048794 ENSPANG00000049370 ENSPANG00000049731 KRTAP1-4 (ENSPANG00000023265) ENSPANG00000045487 KRTAP3-1 (ENSPANG00000002591) #14 ENSPANG00000049303 #17 KRT40 (ENSPANG00000021567) #18 KRT39 (ENSPANG00000021566) #19 KRT23 (ENSPANG00000021565) #20 KRT20 (ENSPANG00000021564) #21 KRT12 (ENSPANG00000021563) #22 KRT10 (ENSPANG00000021616) #23 KRT28 (ENSPANG00000032109) #24 KRT27 (ENSPANG00000021625) #25 KRT26 (ENSPANG00000021624) #26 KRT25 (ENSPANG00000021623) #27 KRT24 (ENSPANG00000021622) #28 KRT222 (ENSPANG00000036008) #29 ENSPANG00000021619 #31 CCR7 (ENSPANG00000047079) #32 TNS4 (ENSPANG00000021664) #33 IGFBP4 (ENSPANG00000021663) TOP2A (ENSPANG00000021661) #34 GJD3 (ENSPANG00000021660) RARA (ENSPANG00000021658) #36 CDC6 (ENSPANG00000021657) #37 Cercopithecinae_d ANCESTRAL SPECIES 7 ENSGT00940000163841.c ENSGT00940000153980.j.d ENSGT00940000156135.h.f.a ENSGT00940000156135.h.f.b.a.b ENSGT00940000156135.h.f.b.b ENSGT00940000163975 ENSGT00940000154448.b.b.b.b.m.a ENSGT00940000162736.t ENSGT00940000160443.o.c ENSGT00940000160443.o.d.a ENSGT00390000001157.A.b #14 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Drill MODERN SPECIES 1283 ENSMLEG00000028300 KRTAP4-1 (ENSMLEG00000039471) KRTAP4-2 (ENSMLEG00000032197) KRTAP4-3 (ENSMLEG00000028103) KRTAP4-5 (ENSMLEG00000014819) ENSMLEG00000029543 ENSMLEG00000000614 ENSMLEG00000004772 ENSMLEG00000018982 ENSMLEG00000041308 KRTAP3-1 (ENSMLEG00000014783) #14 KRT40 (ENSMLEG00000029742) #18 KRT39 (ENSMLEG00000037917) #19 KRT23 (ENSMLEG00000029121) #20 KRT20 (ENSMLEG00000039504) #21 KRT12 (ENSMLEG00000035998) #22 ENSMLEG00000024984 KRT10 (ENSMLEG00000026149) #23 KRT28 (ENSMLEG00000042231) #24 KRT27 (ENSMLEG00000043409) #25 KRT26 (ENSMLEG00000016638) #26 KRT25 (ENSMLEG00000043162) #27 KRT24 (ENSMLEG00000042485) #28 KRT222 (ENSMLEG00000027116) #29 SMARCE1 (ENSMLEG00000035376) #31 CCR7 (ENSMLEG00000031221) #32 TNS4 (ENSMLEG00000039591) #33 IGFBP4 (ENSMLEG00000038307) TOP2A (ENSMLEG00000040900) #34 RARA (ENSMLEG00000042406) #36 CDC6 (ENSMLEG00000017384) #37 Sooty mangabey MODERN SPECIES 564 KRT33A (ENSCATG00000039355) ENSCATG00000029615 ENSCATG00000043038 ENSCATG00000042310 KRTAP9-1 (ENSCATG00000041663) KRTAP4-4 (ENSCATG00000042277) KRTAP4-3 (ENSCATG00000033768) ENSCATG00000021011 ENSCATG00000034203 ENSCATG00000037125 KRTAP3-1 (ENSCATG00000021424) #14 KRT40 (ENSCATG00000034790) #18 KRT39 (ENSCATG00000036783) #19 KRT23 (ENSCATG00000040372) #20 KRT20 (ENSCATG00000039872) #21 KRT12 (ENSCATG00000039373) #22 ENSCATG00000009301 KRT10 (ENSCATG00000044216) #23 KRT28 (ENSCATG00000013336) #24 KRT27 (ENSCATG00000017114) #25 KRT26 (ENSCATG00000032089) #26 KRT25 (ENSCATG00000032084) #27 KRT24 (ENSCATG00000040299) #28 KRT222 (ENSCATG00000025409) #29 SMARCE1 (ENSCATG00000033223) #31 CCR7 (ENSCATG00000041409) #32 TNS4 (ENSCATG00000031207) #33 IGFBP4 (ENSCATG00000035081) TOP2A (ENSCATG00000030085) #34 GJD3 (ENSCATG00000021931) RARA (ENSCATG00000044638) #36 Macaca ANCESTRAL SPECIES 4 ENSGT00950000183407 ENSGT00940000163658 ENSGT00940000164459 ENSGT00940000156135.h.f.a ENSGT00940000156135.h.f.b.a.a.b.a ENSGT00940000162736.s.a.a.a ENSGT00940000160443.o.c ENSGT00940000160443.o.d.a ENSGT00940000160443.p ENSGT00940000160443.o.d.b ENSGT00390000001157.A.b #14 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Macaca_a ANCESTRAL SPECIES 4 ENSGT00940000156135.h.f.b.a.a.b.a ENSGT00940000156135.h.f.b.a.a.b.b.b ENSGT00940000163931 ENSGT00940000159486.y.a ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000162736.s.b.a.b ENSGT00940000160443.o.c ENSGT00940000160443.o.d.a ENSGT00940000160443.p ENSGT00940000160443.o.d.b ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d.p.a #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Rhesus MODERN SPECIES 7 KRTAP4-1 (ENSMMUG00000065282) KRTAP4-2 (ENSMMUG00000045776) ENSMMUG00000020305 KRTAP4-6 (ENSMMUG00000038207) ENSMMUG00000045996 ENSMMUG00000050719 ENSMMUG00000062533 ENSMMUG00000053239 ENSMMUG00000020301 ENSMMUG00000020299 KRTAP1-4 (ENSMMUG00000020300) KRT40 (ENSMMUG00000001142) #18 KRT39 (ENSMMUG00000001510) #19 KRT23 (ENSMMUG00000001505) #20 KRT20 (ENSMMUG00000001503) #21 KRT12 (ENSMMUG00000001502) #22 ENSMMUG00000043282 KRT10 (ENSMMUG00000001500) #23 KRT28 (ENSMMUG00000001499) #24 KRT27 (ENSMMUG00000001497) #25 KRT26 (ENSMMUG00000001495) #26 KRT25 (ENSMMUG00000001492) #27 KRT24 (ENSMMUG00000023592) #28 KRT222 (ENSMMUG00000004004) #29 SMARCE1 (ENSMMUG00000004005) #31 CCR7 (ENSMMUG00000002102) #32 TNS4 (ENSMMUG00000009386) #33 IGFBP4 (ENSMMUG00000009384) TOP2A (ENSMMUG00000008941) #34 GJD3 (ENSMMUG00000012489) RARA (ENSMMUG00000012486) #36 Crab-eating macaque MODERN SPECIES 7 ENSMFAG00000034680 KRTAP4-6 (ENSMFAG00000002460) ENSMFAG00000028572 KRTAP4-7 (ENSMFAG00000000596) ENSMFAG00000051497 ENSMFAG00000056804 ENSMFAG00000036831 KRTAP1-4 (ENSMFAG00000001642) ENSMFAG00000046213 KRT40 (ENSMFAG00000044976) #18 ENSMFAG00000052202 KRT39 (ENSMFAG00000033201) #19 ENSMFAG00000060620 KRT23 (ENSMFAG00000038526) #20 KRT20 (ENSMFAG00000003933) #21 KRT12 (ENSMFAG00000003650) #22 ENSMFAG00000016338 KRT10 (ENSMFAG00000038850) #23 KRT28 (ENSMFAG00000040928) #24 KRT27 (ENSMFAG00000039079) #25 KRT26 (ENSMFAG00000001350) #26 KRT25 (ENSMFAG00000037286) #27 KRT24 (ENSMFAG00000039579) #28 KRT222 (ENSMFAG00000035858) #29 ENSMFAG00000042285 #31 CCR7 (ENSMFAG00000032012) #32 TNS4 (ENSMFAG00000001585) #33 IGFBP4 (ENSMFAG00000043180) TOP2A (ENSMFAG00000002270) #34 ENSMFAG00000055548 ENSMFAG00000010310 Pig-tailed macaque MODERN SPECIES 494 ENSMNEG00000033695 KRTAP4-5 (ENSMNEG00000035983) ENSMNEG00000035649 ENSMNEG00000045170 ENSMNEG00000042925 ENSMNEG00000001165 ENSMNEG00000023777 ENSMNEG00000038682 ENSMNEG00000043725 ENSMNEG00000029591 KRTAP3-1 (ENSMNEG00000002270) #14 KRT40 (ENSMNEG00000040425) #18 KRT39 (ENSMNEG00000045305) #19 KRT23 (ENSMNEG00000042071) #20 KRT20 (ENSMNEG00000029478) #21 KRT12 (ENSMNEG00000004668) #22 ENSMNEG00000032796 KRT10 (ENSMNEG00000035663) #23 KRT28 (ENSMNEG00000045361) #24 KRT27 (ENSMNEG00000028793) #25 KRT26 (ENSMNEG00000044933) #26 KRT25 (ENSMNEG00000035206) #27 KRT24 (ENSMNEG00000043164) #28 KRT222 (ENSMNEG00000040062) #29 SMARCE1 (ENSMNEG00000010025) #31 CCR7 (ENSMNEG00000030706) #32 TNS4 (ENSMNEG00000040756) #33 IGFBP4 (ENSMNEG00000041735) TOP2A (ENSMNEG00000030734) #34 GJD3 (ENSMNEG00000006880) RARA (ENSMNEG00000029542) #36 Rhinopithecus ANCESTRAL SPECIES 61 ENSGT00940000165435 ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000154448.b.b.b.b ENSGT00940000159486.y.a ENSGT00940000162736.q ENSGT00940000162736.r ENSGT00940000160443.o.d.a ENSGT00390000001157.A.b #14 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b.a #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Black snub-nosed monkey MODERN SPECIES 638 ENSRBIG00000038944 ENSRBIG00000036042 ENSRBIG00000033838 KRTAP4-2 (ENSRBIG00000030295) ENSRBIG00000029755 ENSRBIG00000040600 ENSRBIG00000025008 ENSRBIG00000027251 ENSRBIG00000029137 ENSRBIG00000038757 KRTAP3-1 (ENSRBIG00000001148) #14 KRT40 (ENSRBIG00000033402) #18 KRT39 (ENSRBIG00000031920) #19 KRT23 (ENSRBIG00000029190) #20 KRT20 (ENSRBIG00000039923) #21 KRT12 (ENSRBIG00000028260) #22 ENSRBIG00000033196 KRT10 (ENSRBIG00000042127) #23 KRT28 (ENSRBIG00000018840) #24 KRT27 (ENSRBIG00000041899) #25 KRT26 (ENSRBIG00000036214) #26 KRT25 (ENSRBIG00000044480) #27 KRT24 (ENSRBIG00000044202) #28 ENSRBIG00000036799 #29 SMARCE1 (ENSRBIG00000040707) #31 CCR7 (ENSRBIG00000036537) #32 TNS4 (ENSRBIG00000032169) #33 IGFBP4 (ENSRBIG00000029579) TOP2A (ENSRBIG00000027893) #34 RARA (ENSRBIG00000029995) #36 CDC6 (ENSRBIG00000042270) #37 Golden snub-nosed monkey MODERN SPECIES 2684 KRT23 (ENSRROG00000032975) #20 KRT20 (ENSRROG00000045233) #21 KRT12 (ENSRROG00000036947) #22 ENSRROG00000034243 KRT10 (ENSRROG00000035060) #23 KRT28 (ENSRROG00000035612) #24 KRT27 (ENSRROG00000041641) #25 KRT26 (ENSRROG00000036051) #26 KRT25 (ENSRROG00000031435) #27 KRT24 (ENSRROG00000010823) #28 KRT222 (ENSRROG00000005797) #29 SMARCE1 (ENSRROG00000028858) #31 CCR7 (ENSRROG00000038793) #32 TNS4 (ENSRROG00000042906) #33 IGFBP4 (ENSRROG00000033641) TOP2A (ENSRROG00000034836) #34 GJD3 (ENSRROG00000016401) DPH1 (ENSRROG00000027589) Platyrrhini ANCESTRAL SPECIES 1 ENSGT00940000164350.B ENSGT00940000165435 ENSGT00940000163975 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000160443.r.b.a ENSGT00940000160295 #13 ENSGT00940000160443.r.a ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d.p.b #31 ENSGT00940000164415 #30 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Cebidae ANCESTRAL SPECIES 10 ENSGT00940000164350.B ENSGT00940000163975.c ENSGT00940000156135.h.b.b ENSGT00940000165435 ENSGT00940000163975.d ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000160443.r.a ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d.p.a #31 ENSGT00940000164415 #30 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Cebidae_a ANCESTRAL SPECIES 1 ENSGT00940000156135.h.b.a ENSGT00940000164350.B ENSGT00940000163975.c ENSGT00940000156135.h.a.a ENSGT00940000165435 ENSGT00940000163975.d ENSGT00940000154448.b.b.b.b ENSGT00940000162736 ENSGT00940000160443.r.b.a ENSGT00940000160443.r.a ENSGT00390000001157.A.b #14 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 #30 ENSGT00390000003628.b.c.b.a.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Capuchin MODERN SPECIES 228 ENSCCAG00000034421 ENSCCAG00000020353 ENSCCAG00000035189 ENSCCAG00000026553 ENSCCAG00000030292 ENSCCAG00000030861 ENSCCAG00000022140 ENSCCAG00000024497 ENSCCAG00000017936 ENSCCAG00000021121 ENSCCAG00000022586 KRT40 (ENSCCAG00000032652) #18 KRT39 (ENSCCAG00000029088) #19 KRT23 (ENSCCAG00000030267) #20 KRT20 (ENSCCAG00000032974) #21 KRT12 (ENSCCAG00000032972) #22 KRT10 (ENSCCAG00000036373) #23 KRT28 (ENSCCAG00000037023) #24 KRT27 (ENSCCAG00000009302) #25 KRT26 (ENSCCAG00000022891) #26 KRT25 (ENSCCAG00000025845) #27 KRT24 (ENSCCAG00000037342) #28 KRT222 (ENSCCAG00000032779) #29 ENSCCAG00000021368 #30 SMARCE1 (ENSCCAG00000025244) #31 CCR7 (ENSCCAG00000024858) #32 TNS4 (ENSCCAG00000032978) #33 IGFBP4 (ENSCCAG00000029322) TOP2A (ENSCCAG00000025939) #34 ENSCCAG00000031517 RARA (ENSCCAG00000021724) #36 Bolivian squirrel monkey MODERN SPECIES 208 ENSSBOG00000024889 ENSSBOG00000028255 ENSSBOG00000031036 ENSSBOG00000026326 KRTAP4-5 (ENSSBOG00000024832) ENSSBOG00000003071 ENSSBOG00000031693 ENSSBOG00000031937 ENSSBOG00000032989 ENSSBOG00000001195 KRTAP3-1 (ENSSBOG00000021282) #14 KRT40 (ENSSBOG00000033336) #18 KRT39 (ENSSBOG00000023156) #19 KRT23 (ENSSBOG00000029946) #20 KRT20 (ENSSBOG00000020042) #21 KRT12 (ENSSBOG00000020046) #22 KRT10 (ENSSBOG00000034537) #23 KRT28 (ENSSBOG00000033194) #24 KRT26 (ENSSBOG00000031304) #26 KRT24 (ENSSBOG00000020285) #28 KRT222 (ENSSBOG00000035572) #29 SMARCE1 (ENSSBOG00000001180) #31 CCR7 (ENSSBOG00000028714) #32 TNS4 (ENSSBOG00000034575) #33 IGFBP4 (ENSSBOG00000022228) TOP2A (ENSSBOG00000016584) #34 ENSSBOG00000028183 RARA (ENSSBOG00000034538) #36 CDC6 (ENSSBOG00000013277) #37 WIPF2 (ENSSBOG00000029118) RAPGEFL1 (ENSSBOG00000029673) Marmoset MODERN SPECIES 17 ENSCJAG00000067750 KRTAP4-12 (ENSCJAG00000069967) ENSCJAG00000082655 ENSCJAG00000081670 ENSCJAG00000080141 ENSCJAG00000074243 ENSCJAG00000083167 ENSCJAG00000038794 KRTAP3-1 (ENSCJAG00000044200) #14 ENSCJAG00000076427 #17 ENSCJAG00000079566 #17 KRT40 (ENSCJAG00000013706) #18 KRT39 (ENSCJAG00000013697) #19 ENSCJAG00000013664 #24 KRT20 (ENSCJAG00000013679) #21 KRT12 (ENSCJAG00000013609) #22 KRT10 (ENSCJAG00000044765) #23 KRT24 (ENSCJAG00000034830) #28 KRT222 (ENSCJAG00000035627) #29 ENSCJAG00000013573 #31 CCR7 (ENSCJAG00000075739) #32 TNS4 (ENSCJAG00000013560) #33 IGFBP4 (ENSCJAG00000013550) TOP2A (ENSCJAG00000013478) #34 ENSCJAG00000065689 GJD3 (ENSCJAG00000046154) RARA (ENSCJAG00000013440) #36 CDC6 (ENSCJAG00000011073) #37 ENSCJAG00000081240 ENSCJAG00000031546 TEX14 (ENSCJAG00000073487) Mas night monkey MODERN SPECIES 481 KRTAP4-7 (ENSANAG00000028643) ENSANAG00000033154 #9 ENSANAG00000019385 ENSANAG00000030978 #13 ENSANAG00000031799 KRTAP3-1 (ENSANAG00000014505) #14 KRT40 (ENSANAG00000031905) #18 KRT39 (ENSANAG00000037576) #19 KRT23 (ENSANAG00000033242) #20 KRT20 (ENSANAG00000037651) #21 KRT12 (ENSANAG00000031208) #22 KRT10 (ENSANAG00000032560) #23 KRT28 (ENSANAG00000037757) #24 KRT27 (ENSANAG00000032615) #25 KRT26 (ENSANAG00000022112) #26 KRT25 (ENSANAG00000027137) #27 KRT24 (ENSANAG00000037902) #28 KRT222 (ENSANAG00000023560) #29 ENSANAG00000032353 #31 CCR7 (ENSANAG00000021558) #32 TNS4 (ENSANAG00000036996) #33 IGFBP4 (ENSANAG00000002213) TOP2A (ENSANAG00000025180) #34 ENSANAG00000026269 RARA (ENSANAG00000038222) #36 CDC6 (ENSANAG00000030612) #37 Tarsier MODERN SPECIES 3915 KRT40 (ENSTSYG00000011333) #18 KRT39 (ENSTSYG00000008675) #19 KRT23 (ENSTSYG00000006431) #20 KRT20 (ENSTSYG00000011001) #21 KRT12 (ENSTSYG00000010990) #22 KRT10 (ENSTSYG00000009031) #23 KRT28 (ENSTSYG00000007469) #24 KRT27 (ENSTSYG00000007457) #25 KRT26 (ENSTSYG00000011414) #26 KRT25 (ENSTSYG00000009548) #27 ENSTSYG00000030238 KRT222 (ENSTSYG00000030456) #29 SMARCE1 (ENSTSYG00000012496) #31 CCR7 (ENSTSYG00000028282) #32 Strepsirrhini ANCESTRAL SPECIES 4 ENSGT00940000156135 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000160295 #13 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Lemuriformes ANCESTRAL SPECIES 2 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00940000160295 #13 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000155258.t ENSGT00940000154403.a.a ENSGT00950000183311 ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000163444 ENSGT00940000162088 ENSGT00940000153980.i.a ENSGT00940000163426 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Coquerels sifaka MODERN SPECIES 120 KRTAP29-1 (ENSPCOG00000019509) ENSPCOG00000013137 ENSPCOG00000022603 ENSPCOG00000017090 ENSPCOG00000026553 ENSPCOG00000014377 ENSPCOG00000021181 ENSPCOG00000014598 ENSPCOG00000012200 ENSPCOG00000015985 #13 ENSPCOG00000004823 #13 KRT40 (ENSPCOG00000017920) #18 KRT39 (ENSPCOG00000024190) #19 KRT23 (ENSPCOG00000015929) #20 KRT20 (ENSPCOG00000019180) #21 KRT12 (ENSPCOG00000013217) #22 ENSPCOG00000023362 KRT10 (ENSPCOG00000018225) #23 KRT28 (ENSPCOG00000025536) #24 KRT27 (ENSPCOG00000023758) #25 KRT26 (ENSPCOG00000025920) #26 KRT25 (ENSPCOG00000016980) #27 KRT24 (ENSPCOG00000018519) #28 KRT222 (ENSPCOG00000027280) #29 ENSPCOG00000013727 #31 CCR7 (ENSPCOG00000016602) #32 TNS4 (ENSPCOG00000024055) #33 IGFBP4 (ENSPCOG00000013262) TOP2A (ENSPCOG00000025407) #34 RARA (ENSPCOG00000024070) #36 CDC6 (ENSPCOG00000027397) #37 Greater bamboo lemur MODERN SPECIES 1733 ENSPSMG00000010522 #17 KRT40 (ENSPSMG00000010509) #18 KRT39 (ENSPSMG00000010491) #19 KRT23 (ENSPSMG00000010479) #20 KRT20 (ENSPSMG00000010469) #21 KRT12 (ENSPSMG00000010461) #22 KRT10 (ENSPSMG00000010450) #23 KRT28 (ENSPSMG00000010434) #24 KRT27 (ENSPSMG00000010420) #25 ENSPSMG00000010390 #26 Mouse lemur MODERN SPECIES 7 ENSMICG00000043010 ENSMICG00000034211 ENSMICG00000046956 ENSMICG00000007150 ENSMICG00000046748 ENSMICG00000034773 ENSMICG00000007164 ENSMICG00000046104 KRTAP4-3 (ENSMICG00000007155) ENSMICG00000047933 ENSMICG00000037682 KRT40 (ENSMICG00000009912) #18 KRT39 (ENSMICG00000009899) #19 KRT23 (ENSMICG00000009894) #20 KRT20 (ENSMICG00000035159) #21 KRT12 (ENSMICG00000009875) #22 KRT10 (ENSMICG00000032358) #23 KRT28 (ENSMICG00000009865) #24 KRT27 (ENSMICG00000009856) #25 KRT26 (ENSMICG00000009852) #26 KRT25 (ENSMICG00000027114) #27 KRT24 (ENSMICG00000009839) #28 KRT222 (ENSMICG00000032628) #29 ENSMICG00000009821 #31 CCR7 (ENSMICG00000028152) #32 TNS4 (ENSMICG00000009811) #33 IGFBP4 (ENSMICG00000009809) TOP2A (ENSMICG00000009772) #34 RARA (ENSMICG00000029502) #36 CDC6 (ENSMICG00000045842) #37 WIPF2 (ENSMICG00000033471) Bushbaby MODERN SPECIES 133 ENSOGAG00000031966 ENSOGAG00000011446 ENSOGAG00000034704 ENSOGAG00000003105 KRTAP4-5 (ENSOGAG00000003102) ENSOGAG00000034870 ENSOGAG00000025341 ENSOGAG00000024366 #9 KRTAP3-1 (ENSOGAG00000003088) #14 ENSOGAG00000026860 #17 ENSOGAG00000024415 #17 KRT40 (ENSOGAG00000003085) #18 KRT39 (ENSOGAG00000003083) #19 KRT23 (ENSOGAG00000003082) #20 KRT20 (ENSOGAG00000003079) #21 KRT12 (ENSOGAG00000003076) #22 KRT10 (ENSOGAG00000003075) #23 KRT28 (ENSOGAG00000003074) #24 KRT27 (ENSOGAG00000003073) #25 KRT26 (ENSOGAG00000003070) #26 KRT25 (ENSOGAG00000003068) #27 KRT24 (ENSOGAG00000014264) #28 KRT222 (ENSOGAG00000024213) #29 ENSOGAG00000001652 #31 CCR7 (ENSOGAG00000001650) #32 TNS4 (ENSOGAG00000001646) #33 IGFBP4 (ENSOGAG00000001644) TOP2A (ENSOGAG00000001638) #34 GJD3 (ENSOGAG00000028723) RARA (ENSOGAG00000024257) #36 CDC6 (ENSOGAG00000008542) #37 Atlantogenata ANCESTRAL SPECIES 1 ENSGT00940000161991 ENSGT00940000153980 ENSGT00940000163658 ENSGT00940000164459 ENSGT00940000156135 ENSGT00940000163931 ENSGT00940000162736 ENSGT00940000155433 #9 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161950 #26 ENSGT00940000161982 #25 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Afrotheria ANCESTRAL SPECIES 2 ENSGT00940000161787 ENSGT00940000162088 ENSGT00940000161991 ENSGT00940000153980 ENSGT00940000163426 ENSGT00940000163658 ENSGT00940000156135 ENSGT00940000163931 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Afrotheria_a ANCESTRAL SPECIES 2 ENSGT00940000161787 ENSGT00940000162088 ENSGT00940000161991 ENSGT00940000153980 ENSGT00940000163426 ENSGT00940000163658 ENSGT00940000156135 ENSGT00940000163931 ENSGT00940000160443 ENSGT00390000001157.A.b #14 ENSGT00390000001157.C #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Elephant MODERN SPECIES 310 ENSLAFG00000017176 ENSLAFG00000028624 ENSLAFG00000020912 ENSLAFG00000007437 ENSLAFG00000007429 #9 ENSLAFG00000007428 #9 ENSLAFG00000007424 #9 ENSLAFG00000007421 ENSLAFG00000020659 ENSLAFG00000022004 KRTAP3-1 (ENSLAFG00000026928) #14 ENSLAFG00000007419 #17 KRT40 (ENSLAFG00000007415) #18 KRT39 (ENSLAFG00000007407) #19 KRT23 (ENSLAFG00000006853) #20 KRT12 (ENSLAFG00000015639) #22 KRT10 (ENSLAFG00000011407) #23 KRT28 (ENSLAFG00000022003) #24 KRT27 (ENSLAFG00000006836) #25 KRT25 (ENSLAFG00000006830) #27 KRT24 (ENSLAFG00000000455) #28 KRT222 (ENSLAFG00000020933) #29 SMARCE1 (ENSLAFG00000015555) #31 CCR7 (ENSLAFG00000021527) #32 TNS4 (ENSLAFG00000017735) #33 IGFBP4 (ENSLAFG00000011721) TOP2A (ENSLAFG00000008287) #34 RARA (ENSLAFG00000016234) #36 CDC6 (ENSLAFG00000000608) #37 WIPF2 (ENSLAFG00000011375) ENSLAFG00000031628 Hyrax MODERN SPECIES 6534 ENSPCAG00000001283 #19 KRT23 (ENSPCAG00000001223) #20 KRT20 (ENSPCAG00000001155) #21 KRT12 (ENSPCAG00000001107) #22 Tenrec MODERN SPECIES 7767 KRT12 (ENSETEG00000019820) #22 Xenarthra ANCESTRAL SPECIES 42 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00980000201475 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Sloth MODERN SPECIES 6954 KRT20 (ENSCHOG00000007590) #21 KRT12 (ENSCHOG00000007575) #22 Armadillo MODERN SPECIES 691 ENSDNOG00000040032 #17 ENSDNOG00000019941 #19 KRT23 (ENSDNOG00000002451) #20 KRT20 (ENSDNOG00000019940) #21 KRT12 (ENSDNOG00000017007) #22 ENSDNOG00000001224 #25 ENSDNOG00000016695 #27 KRT24 (ENSDNOG00000001218) #28 KRT222 (ENSDNOG00000040439) #29 SMARCE1 (ENSDNOG00000007636) #31 ENSDNOG00000042721 #32 TNS4 (ENSDNOG00000031522) #33 IGFBP4 (ENSDNOG00000044382) TOP2A (ENSDNOG00000042715) #34 ENSDNOG00000042346 RARA (ENSDNOG00000046532) #36 WIPF2 (ENSDNOG00000007939) RAPGEFL1 (ENSDNOG00000043103) CASC3 (ENSDNOG00000017249) MSL1 (ENSDNOG00000042904) Marsupialia ANCESTRAL SPECIES 13 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000161982.b #25 ENSGT00940000161982.a #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Marsupialia_b ANCESTRAL SPECIES 16 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000161982.b #25 ENSGT00940000161982.a #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Diprotodontia ANCESTRAL SPECIES 9 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849.k.a #23 ENSGT00940000160849.k.b #23 ENSGT00940000161982.b #25 ENSGT00940000161982.a #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000160849.l #23 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 Diprotodontia_a ANCESTRAL SPECIES 11 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849.k.a #23 ENSGT00940000160849.k.b #23 ENSGT00940000161982.b #25 ENSGT00940000161982.a #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000160849.l #23 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT00940000159997 #36 koala MODERN SPECIES 67 ENSPCIG00000034784 ENSPCIG00000004266 ENSPCIG00000025875 ENSPCIG00000025874 #15 ENSPCIG00000025873 #15 ENSPCIG00000032116 #17 ENSPCIG00000036192 #17 KRT40 (ENSPCIG00000025856) #18 ENSPCIG00000025848 KRT23 (ENSPCIG00000025846) #20 KRT20 (ENSPCIG00000025844) #21 KRT12 (ENSPCIG00000025781) #22 ENSPCIG00000012560 #23 ENSPCIG00000012561 #23 ENSPCIG00000012562 #25 ENSPCIG00000012563 #25 KRT26 (ENSPCIG00000025758) #26 KRT25 (ENSPCIG00000025757) #27 ENSPCIG00000025755 #28 KRT24 (ENSPCIG00000025753) #28 KRT222 (ENSPCIG00000025748) #29 SMARCE1 (ENSPCIG00000025742) #31 CCR7 (ENSPCIG00000034639) #32 TNS4 (ENSPCIG00000025729) #33 IGFBP4 (ENSPCIG00000025726) TOP2A (ENSPCIG00000025715) #34 RARA (ENSPCIG00000025697) #36 Common wonbat MODERN SPECIES 1037 ENSVURG00010004380 ENSVURG00010004485 ENSVURG00010004500 ENSVURG00010004575 #9 ENSVURG00010004590 ENSVURG00010004596 #15 ENSVURG00010004603 #15 ENSVURG00010004613 #17 ENSVURG00010004619 #17 KRT40 (ENSVURG00010004631) #18 ENSVURG00010004646 KRT23 (ENSVURG00010004662) #20 KRT20 (ENSVURG00010004673) #21 KRT12 (ENSVURG00010004697) #22 KRT10 (ENSVURG00010004767) #23 ENSVURG00010004869 #28 KRT24 (ENSVURG00010004908) #28 ENSVURG00010004993 #23 KRT222 (ENSVURG00010005011) #29 SMARCE1 (ENSVURG00010005053) #31 CCR7 (ENSVURG00010005104) #32 TNS4 (ENSVURG00010005120) #33 IGFBP4 (ENSVURG00010005135) TOP2A (ENSVURG00010005155) #34 ENSVURG00010005193 ENSVURG00010005198 RAPGEFL1 (ENSVURG00010005204) CASC3 (ENSVURG00010005220) MSL1 (ENSVURG00010005242) Wallaby MODERN SPECIES 9354 KRT12 (ENSMEUG00000003605) #22 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000020864 ENSSHAG00000029620 #9 ENSSHAG00000029992 #9 ENSSHAG00000020768 #9 ENSSHAG00000030303 #13 ENSSHAG00000032154 ENSSHAG00000029444 #13 ENSSHAG00000004571 #15 ENSSHAG00000020935 #15 ENSSHAG00000025429 #17 ENSSHAG00000032187 #17 KRT40 (ENSSHAG00000005127) #18 ENSSHAG00000005663 KRT23 (ENSSHAG00000022536) #20 KRT20 (ENSSHAG00000007295) #21 KRT12 (ENSSHAG00000007542) #22 KRT10 (ENSSHAG00000008107) #23 ENSSHAG00000002027 #25 ENSSHAG00000008599 #25 KRT26 (ENSSHAG00000008696) #26 KRT25 (ENSSHAG00000008841) #27 ENSSHAG00000022462 #28 KRT24 (ENSSHAG00000009276) #28 ENSSHAG00000009434 #23 KRT222 (ENSSHAG00000009670) #29 SMARCE1 (ENSSHAG00000009907) #31 CCR7 (ENSSHAG00000027409) #32 TNS4 (ENSSHAG00000011346) #33 IGFBP4 (ENSSHAG00000011882) TOP2A (ENSSHAG00000012147) #34 RARA (ENSSHAG00000021631) #36 Opossum MODERN SPECIES 1 ENSMODG00000041827 #9 ENSMODG00000051411 ENSMODG00000041044 ENSMODG00000042847 #13 ENSMODG00000038095 #13 ENSMODG00000037733 #13 ENSMODG00000024126 #15 ENSMODG00000041424 #15 ENSMODG00000046528 #17 ENSMODG00000041097 #17 KRT40 (ENSMODG00000013596) #18 ENSMODG00000013588 KRT23 (ENSMODG00000013577) #20 ENSMODG00000028173 KRT20 (ENSMODG00000013562) #21 KRT12 (ENSMODG00000013554) #22 ENSMODG00000013548 #23 ENSMODG00000013512 #23 ENSMODG00000013542 #23 ENSMODG00000013455 #25 ENSMODG00000040965 #25 KRT26 (ENSMODG00000013449) #26 KRT25 (ENSMODG00000013441) #27 ENSMODG00000025669 #28 KRT24 (ENSMODG00000013275) #28 ENSMODG00000025707 #23 KRT222 (ENSMODG00000013194) #29 SMARCE1 (ENSMODG00000013191) #31 CCR7 (ENSMODG00000013181) #32 TNS4 (ENSMODG00000013177) #33 ENSMODG00000039152 Platypus MODERN SPECIES 2 ENSOANG00000042332 ENSOANG00000036100 ENSOANG00000014844 ENSOANG00000047477 ENSOANG00000049090 ENSOANG00000009786 #13 ENSOANG00000002907 #15 ENSOANG00000037221 #15 ENSOANG00000045911 #15 ENSOANG00000040829 #17 ENSOANG00000046979 #17 KRT40 (ENSOANG00000002903) #18 ENSOANG00000002902 KRT23 (ENSOANG00000002901) #20 ENSOANG00000009498 #21 KRT12 (ENSOANG00000014773) #22 ENSOANG00000002900 #21 KRT10 (ENSOANG00000002899) #23 KRT26 (ENSOANG00000002896) #26 KRT25 (ENSOANG00000002895) #27 ENSOANG00000047089 #28 ENSOANG00000047357 #28 ENSOANG00000002894 #28 ENSOANG00000050890 #28 ENSOANG00000042243 #23 KRT222 (ENSOANG00000010960) #29 ENSOANG00000045120 #31 CCR7 (ENSOANG00000045508) #32 TNS4 (ENSOANG00000012954) #33 IGFBP4 (ENSOANG00000047494) TOP2A (ENSOANG00000003053) #34 Sauria ANCESTRAL SPECIES 26 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00950000182969.B.c.a.a.c.f.a ENSGT00940000155258.t ENSGT00390000015789.d ENSGT00940000163247 ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A ENSGT00940000154403.b ENSGT00940000161311.d ENSGT00940000161311.c ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849.p.a #23 ENSGT00940000161783.a #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 Archelosauria ANCESTRAL SPECIES 21 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00950000182969.B.c.a.a.c.f.a ENSGT00940000155258.t ENSGT00390000015789.d ENSGT00940000163247 ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A ENSGT00940000154403.b ENSGT00940000161311.d ENSGT00940000161311.c ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849.p.a #23 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT01080000258839 Cryptodira ANCESTRAL SPECIES 23 ENSGT00390000012959.a ENSGT00940000156331 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000155258.t ENSGT00940000163247 ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382 #22 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT01080000258839 ENSGT00940000160144 ENSGT00390000006930 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 401 FKBP10 (ENSPSIG00000002740) P3H4 (ENSPSIG00000002702) JUP (ENSPSIG00000002691) ENSPSIG00000002686 EIF1 (ENSPSIG00000002672) ENSPSIG00000002669 ENSPSIG00000002668 ENSPSIG00000002643 ENSPSIG00000002638 KRT15 (ENSPSIG00000002628) KRT23 (ENSPSIG00000002604) #20 ENSPSIG00000002600 #21 KRT19 (ENSPSIG00000002599) ENSPSIG00000002598 #22 ENSPSIG00000002065 ENSPSIG00000002596 #22 ENSPSIG00000002595 #28 KRT222 (ENSPSIG00000002590) #29 SMARCE1 (ENSPSIG00000002527) #31 CCR7 (ENSPSIG00000002515) #32 TNS4 (ENSPSIG00000002504) #33 IGFBP4 (ENSPSIG00000002490) ENSPSIG00000002457 TOP2A (ENSPSIG00000002433) #34 ENSPSIG00000002064 RARA (ENSPSIG00000002372) #36 CDC6 (ENSPSIG00000002363) #37 RAPGEFL1 (ENSPSIG00000002352) CASC3 (ENSPSIG00000002339) MSL1 (ENSPSIG00000002337) Chinese turtle MODERN SPECIES 401 ENSPSIG00000002752 FKBP10 (ENSPSIG00000002740) P3H4 (ENSPSIG00000002702) JUP (ENSPSIG00000002691) ENSPSIG00000002686 EIF1 (ENSPSIG00000002672) ENSPSIG00000002669 ENSPSIG00000002668 ENSPSIG00000002643 ENSPSIG00000002638 KRT15 (ENSPSIG00000002628) KRT23 (ENSPSIG00000002604) #20 ENSPSIG00000002600 #21 KRT19 (ENSPSIG00000002599) ENSPSIG00000002598 #22 ENSPSIG00000002065 ENSPSIG00000002596 #22 ENSPSIG00000002595 #28 KRT222 (ENSPSIG00000002590) #29 SMARCE1 (ENSPSIG00000002527) #31 CCR7 (ENSPSIG00000002515) #32 TNS4 (ENSPSIG00000002504) #33 IGFBP4 (ENSPSIG00000002490) ENSPSIG00000002457 TOP2A (ENSPSIG00000002433) #34 ENSPSIG00000002064 RARA (ENSPSIG00000002372) #36 CDC6 (ENSPSIG00000002363) #37 RAPGEFL1 (ENSPSIG00000002352) CASC3 (ENSPSIG00000002339) Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES ENSGT00940000159382.c #22 Testudinidae ANCESTRAL SPECIES ENSGT00940000159382.c #22 Goode s thornscrub tortoise MODERN SPECIES 15 ENSGEVG00005010382 NKIRAS2 (ENSGEVG00005010454) DNAJC7 (ENSGEVG00005010483) CNP (ENSGEVG00005010526) ODAD4 (ENSGEVG00005010597) ACLY (ENSGEVG00005010903) KLHL11 (ENSGEVG00005010959) KLHL10 (ENSGEVG00005011024) NT5C3B (ENSGEVG00005011091) FKBP10 (ENSGEVG00005011165) P3H4 (ENSGEVG00005011368) JUP (ENSGEVG00005011560) ENSGEVG00005011615 ENSGEVG00005011873 EIF1 (ENSGEVG00005011907) ENSGEVG00005011929 #22 ENSGEVG00005012012 ENSGEVG00005012106 ENSGEVG00005012196 ENSGEVG00005012379 ENSGEVG00005012618 ENSGEVG00005012756 KRT15 (ENSGEVG00005012829) KRT23 (ENSGEVG00005012916) #20 ENSGEVG00005013074 KRT12 (ENSGEVG00005013775) #22 SMARCE1 (ENSGEVG00005014242) #31 CCR7 (ENSGEVG00005014270) #32 TNS4 (ENSGEVG00005014290) #33 IGFBP4 (ENSGEVG00005014377) ENSGEVG00005014498 Testudinoidea ANCESTRAL SPECIES 19 ENSGT00390000012959.a ENSGT00940000156331 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000155258.t ENSGT00940000163247.w ENSGT00940000163247.v ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.d #22 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557.vb ENSGT00940000155557.wb ENSGT00940000160144 ENSGT00390000006930 Emydidae ANCESTRAL SPECIES 26 ENSGT00390000012959.a ENSGT00940000156331 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000155258.t ENSGT00940000163247.w ENSGT00940000163247.v ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.d #22 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557.vb ENSGT00940000155557.wb ENSGT00940000160144 ENSGT00390000006930 Three-toed box turtle MODERN SPECIES 91 NT5C3B (ENSTMTG00000007037) FKBP10 (ENSTMTG00000007058) P3H4 (ENSTMTG00000007081) JUP (ENSTMTG00000007105) ENSTMTG00000007181 ENSTMTG00000007574 EIF1 (ENSTMTG00000007588) ENSTMTG00000007603 ENSTMTG00000007628 ENSTMTG00000007662 ENSTMTG00000007676 ENSTMTG00000007705 KRT15 (ENSTMTG00000007720) KRT23 (ENSTMTG00000007749) #20 ENSTMTG00000007803 KRT12 (ENSTMTG00000008143) #22 KRT24 (ENSTMTG00000008250) #28 KRT222 (ENSTMTG00000008270) #29 SMARCE1 (ENSTMTG00000008288) #31 CCR7 (ENSTMTG00000008302) #32 ENSTMTG00000008307 TNS4 (ENSTMTG00000008315) #33 IGFBP4 (ENSTMTG00000008352) ENSTMTG00000008359 ENSTMTG00000008387 #34 ENSTMTG00000008433 #34 RARA (ENSTMTG00000008461) #36 CDC6 (ENSTMTG00000008490) #37 ENSTMTG00000008533 ENSTMTG00000008537 RAPGEFL1 (ENSTMTG00000008557) painted turtle MODERN SPECIES 2394 NT5C3B (ENSCPBG00000006621) FKBP10 (ENSCPBG00000006612) P3H4 (ENSCPBG00000006605) ENSCPBG00000006602 JUP (ENSCPBG00000006592) ENSCPBG00000006587 ENSCPBG00000006570 ENSCPBG00000006566 ENSCPBG00000006557 ENSCPBG00000006527 ENSCPBG00000006507 ENSCPBG00000006500 KRT15 (ENSCPBG00000006494) KRT23 (ENSCPBG00000006488) #20 ENSCPBG00000005869 KRT12 (ENSCPBG00000005794) #22 KRT24 (ENSCPBG00000005755) #28 KRT222 (ENSCPBG00000005743) #29 SMARCE1 (ENSCPBG00000005734) #31 CCR7 (ENSCPBG00000005728) #32 TNS4 (ENSCPBG00000005006) #33 IGFBP4 (ENSCPBG00000004980) TOP2A (ENSCPBG00000004966) #34 GJD3 (ENSCPBG00000004957) ENSCPBG00000004951 CDC6 (ENSCPBG00000004797) #37 ENSCPBG00000004786 ENSCPBG00000004781 RAPGEFL1 (ENSCPBG00000004773) CASC3 (ENSCPBG00000004750) MSL1 (ENSCPBG00000004589) Testudinidae ANCESTRAL SPECIES 24 ENSGT00940000154664 ENSGT00390000012959.a ENSGT00940000156331 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.w ENSGT00940000163247.v ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.d #22 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557.vb ENSGT00940000155557.wb ENSGT00940000160144 ENSGT00390000006930 Abingdon island giant tortoise MODERN SPECIES 1384 P3H4 (ENSCABG00000011671) JUP (ENSCABG00000011670) ENSCABG00000011669 ENSCABG00000011667 ENSCABG00000011664 ENSCABG00000011663 ENSCABG00000011659 ENSCABG00000011657 ENSCABG00000011651 ENSCABG00000011642 ENSCABG00000011634 ENSCABG00000011629 ENSCABG00000011624 KRT23 (ENSCABG00000011620) #20 ENSCABG00000011586 KRT12 (ENSCABG00000011355) #22 KRT24 (ENSCABG00000011350) #28 KRT222 (ENSCABG00000011348) #29 SMARCE1 (ENSCABG00000011346) #31 CCR7 (ENSCABG00000011344) #32 ENSCABG00000011342 TNS4 (ENSCABG00000011249) #33 IGFBP4 (ENSCABG00000011238) ENSCABG00000011235 TOP2A (ENSCABG00000011214) #34 GJD3 (ENSCABG00000011213) RARA (ENSCABG00000011212) #36 CDC6 (ENSCABG00000011211) #37 ENSCABG00000011209 ENSCABG00000011207 RAPGEFL1 (ENSCABG00000011192) Goode s thornscrub tortoise MODERN SPECIES 15 P3H4 (ENSGEVG00005011368) JUP (ENSGEVG00005011560) ENSGEVG00005011615 ENSGEVG00005011873 EIF1 (ENSGEVG00005011907) ENSGEVG00005011929 #22 ENSGEVG00005012012 ENSGEVG00005012106 ENSGEVG00005012196 ENSGEVG00005012379 ENSGEVG00005012618 ENSGEVG00005012756 KRT15 (ENSGEVG00005012829) KRT23 (ENSGEVG00005012916) #20 ENSGEVG00005013074 KRT12 (ENSGEVG00005013775) #22 SMARCE1 (ENSGEVG00005014242) #31 CCR7 (ENSGEVG00005014270) #32 TNS4 (ENSGEVG00005014290) #33 IGFBP4 (ENSGEVG00005014377) ENSGEVG00005014498 TOP2A (ENSGEVG00005015250) #34 GJD3 (ENSGEVG00005018837) RARA (ENSGEVG00005018860) #36 CDC6 (ENSGEVG00005018895) #37 WIPF2 (ENSGEVG00005018923) ENSGEVG00005018935 RAPGEFL1 (ENSGEVG00005018949) CASC3 (ENSGEVG00005018998) MSL1 (ENSGEVG00005004312) NR1D1 (ENSGEVG00005004327) Archosauria ANCESTRAL SPECIES 20 ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161311.d ENSGT00940000161311.c ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849.p.a #23 ENSGT00940000161783.b #28 ENSGT00960000190892 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Australian saltwater crocodile MODERN SPECIES 61 ENSCPRG00005003480 ENSCPRG00005003472 ENSCPRG00005003467 ENSCPRG00005003464 ENSCPRG00005003463 ENSCPRG00005003461 ENSCPRG00005003457 ENSCPRG00005003452 ENSCPRG00005003447 ENSCPRG00005003446 ENSCPRG00005003413 ENSCPRG00005003305 ENSCPRG00005003229 KRT23 (ENSCPRG00005003211) #20 KRT20 (ENSCPRG00005003180) #21 KRT12 (ENSCPRG00005003161) #22 KRT10 (ENSCPRG00005003159) #23 KRT24 (ENSCPRG00005003146) #28 ENSCPRG00005003141 SMARCE1 (ENSCPRG00005003138) #31 CCR7 (ENSCPRG00005003131) #32 ENSCPRG00005003130 TNS4 (ENSCPRG00005003064) #33 IGFBP4 (ENSCPRG00005003051) ENSCPRG00005003038 ENSCPRG00005003033 TOP2A (ENSCPRG00005002995) #34 GJD3 (ENSCPRG00005002985) RARA (ENSCPRG00005002978) #36 CDC6 (ENSCPRG00005002969) #37 WIPF2 (ENSCPRG00005002953) Aves ANCESTRAL SPECIES 26 ENSGT00940000154664 ENSGT00390000012959.a ENSGT00940000156331 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT01080000258839 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Neognathae ANCESTRAL SPECIES 23 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT01080000258839 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Neognathae_b ANCESTRAL SPECIES 23 ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000160849.o #23 ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 ENSGT00940000160548 Passeriformes ANCESTRAL SPECIES 29 ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000160849.o #23 ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 ENSGT00940000160548 Great tit MODERN SPECIES 20 FKBP10 (ENSPMJG00000001007) P3H4 (ENSPMJG00000001004) JUP (ENSPMJG00000000991) ENSPMJG00000000941 EIF1 (ENSPMJG00000000936) ENSPMJG00000000917 KRT13 (ENSPMJG00000000913) ENSPMJG00000000768 ENSPMJG00000000388 ENSPMJG00000000358 ENSPMJG00000000335 KRT19 (ENSPMJG00000000323) KRT15 (ENSPMJG00000000316) KRT23 (ENSPMJG00000000306) #20 KRT20 (ENSPMJG00000000284) #21 KRT12 (ENSPMJG00000000279) #22 KRT222 (ENSPMJG00000000276) #29 SMARCE1 (ENSPMJG00000000262) #31 CCR7 (ENSPMJG00000000255) #32 TNS4 (ENSPMJG00000000210) #33 IGFBP4 (ENSPMJG00000000187) ENSPMJG00000000173 TOP2A (ENSPMJG00000000127) #34 GJD3 (ENSPMJG00000000120) RARA (ENSPMJG00000000114) #36 CDC6 (ENSPMJG00000000063) #37 ENSPMJG00000017939 RAPGEFL1 (ENSPMJG00000017938) CASC3 (ENSPMJG00000017937) MSL1 (ENSPMJG00000017930) ENSPMJG00000017927 Passeriformes_d ANCESTRAL SPECIES 25 ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000160849.o #23 ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a.f ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 ENSGT00940000160548 Passeriformes_g ANCESTRAL SPECIES 26 ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000160849.o #23 ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a.f ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 ENSGT00940000160548 Passeroidea ANCESTRAL SPECIES 32 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a.f ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 ENSGT00940000160548 Zebra finch MODERN SPECIES 20 FKBP10 (ENSTGUG00000002431) P3H4 (ENSTGUG00000002427) JUP (ENSTGUG00000002410) ENSTGUG00000027542 ENSTGUG00000027189 EIF1 (ENSTGUG00000026666) ENSTGUG00000024454 KRT13 (ENSTGUG00000016947) ENSTGUG00000002392 ENSTGUG00000002388 ENSTGUG00000019538 ENSTGUG00000016530 KRT19 (ENSTGUG00000002393) KRT23 (ENSTGUG00000018328) #20 KRT20 (ENSTGUG00000026084) #21 KRT12 (ENSTGUG00000002372) #22 KRT222 (ENSTGUG00000002371) #29 SMARCE1 (ENSTGUG00000002357) #31 CCR7 (ENSTGUG00000002356) #32 TNS4 (ENSTGUG00000021496) #33 IGFBP4 (ENSTGUG00000002346) TOP2A (ENSTGUG00000002312) #34 ENSTGUG00000021616 GJD3 (ENSTGUG00000002311) RARA (ENSTGUG00000022927) #36 CDC6 (ENSTGUG00000002293) #37 ENSTGUG00000020027 ENSTGUG00000002288 RAPGEFL1 (ENSTGUG00000019813) CASC3 (ENSTGUG00000002300) MSL1 (ENSTGUG00000002297) Common canary MODERN SPECIES 42 ENSSCAG00000007584 ENSSCAG00000007653 EIF1 (ENSSCAG00000007656) ENSSCAG00000007660 ENSSCAG00000007664 ENSSCAG00000007670 ENSSCAG00000007673 ENSSCAG00000007681 ENSSCAG00000007686 ENSSCAG00000007692 ENSSCAG00000007701 KRT19 (ENSSCAG00000007706) KRT15 (ENSSCAG00000007710) KRT23 (ENSSCAG00000007713) #20 KRT20 (ENSSCAG00000007719) #21 KRT12 (ENSSCAG00000007734) #22 KRT222 (ENSSCAG00000007752) #29 SMARCE1 (ENSSCAG00000007757) #31 CCR7 (ENSSCAG00000007768) #32 TNS4 (ENSSCAG00000007773) #33 IGFBP4 (ENSSCAG00000007784) ENSSCAG00000007790 TOP2A (ENSSCAG00000007794) #34 RARA (ENSSCAG00000007824) #36 GJD3 (ENSSCAG00000007939) CDC6 (ENSSCAG00000007941) #37 WIPF2 (ENSSCAG00000007946) CASC3 (ENSSCAG00000007958) MSL1 (ENSSCAG00000008010) ENSSCAG00000008026 THRA (ENSSCAG00000008027) Medium ground finch MODERN SPECIES 356 ENSGFOG00000006880 ENSGFOG00000006883 ENSGFOG00000006890 ENSGFOG00000006896 ENSGFOG00000006908 #23 ENSGFOG00000006918 ENSGFOG00000006927 ENSGFOG00000006944 ENSGFOG00000006956 KRT19 (ENSGFOG00000007054) KRT15 (ENSGFOG00000007061) KRT23 (ENSGFOG00000007070) #20 KRT20 (ENSGFOG00000007085) #21 KRT12 (ENSGFOG00000007092) #22 ENSGFOG00000007105 KRT222 (ENSGFOG00000007111) #29 SMARCE1 (ENSGFOG00000007119) #31 CCR7 (ENSGFOG00000007134) #32 TNS4 (ENSGFOG00000007151) #33 IGFBP4 (ENSGFOG00000007229) TOP2A (ENSGFOG00000007236) #34 RARA (ENSGFOG00000007269) #36 Flycatcher MODERN SPECIES 19 JUP (ENSFALG00000000297) ENSFALG00000000310 ENSFALG00000000312 EIF1 (ENSFALG00000000314) ENSFALG00000026044 ENSFALG00000000318 ENSFALG00000023326 ENSFALG00000027809 ENSFALG00000000327 ENSFALG00000000331 ENSFALG00000000335 KRT19 (ENSFALG00000000341) KRT15 (ENSFALG00000000346) KRT23 (ENSFALG00000000349) #20 KRT20 (ENSFALG00000000350) #21 KRT12 (ENSFALG00000000351) #22 KRT222 (ENSFALG00000000359) #29 SMARCE1 (ENSFALG00000000362) #31 CCR7 (ENSFALG00000000373) #32 TNS4 (ENSFALG00000000379) #33 IGFBP4 (ENSFALG00000023499) ENSFALG00000026880 TOP2A (ENSFALG00000000389) #34 RARA (ENSFALG00000000392) #36 CDC6 (ENSFALG00000000393) #37 ENSFALG00000023333 RAPGEFL1 (ENSFALG00000000406) CASC3 (ENSFALG00000000412) MSL1 (ENSFALG00000000420) NR1D1 (ENSFALG00000000424) THRA (ENSFALG00000000433) Neognathae_c ANCESTRAL SPECIES 26 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000163247.t ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000160849.o #23 ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 ENSGT00940000160548 ENSGT00940000157917 Kakapo MODERN SPECIES 12 ENSSHBG00005017676 EIF1 (ENSSHBG00005017683) ENSSHBG00005017694 ENSSHBG00005017704 ENSSHBG00005017711 ENSSHBG00005017719 ENSSHBG00005017728 ENSSHBG00005017736 #23 ENSSHBG00005017741 ENSSHBG00005017742 ENSSHBG00005017746 ENSSHBG00005017756 KRT15 (ENSSHBG00005017768) KRT23 (ENSSHBG00005017777) #20 KRT20 (ENSSHBG00005017782) #21 KRT12 (ENSSHBG00005017796) #22 KRT222 (ENSSHBG00005017817) #29 SMARCE1 (ENSSHBG00005017823) #31 CCR7 (ENSSHBG00005017832) #32 ENSSHBG00005017836 TNS4 (ENSSHBG00005017847) #33 IGFBP4 (ENSSHBG00005017853) TOP2A (ENSSHBG00005018009) #34 RARA (ENSSHBG00005020013) #36 CDC6 (ENSSHBG00005000732) #37 WIPF2 (ENSSHBG00005000739) CASC3 (ENSSHBG00005000761) MSL1 (ENSSHBG00005000763) NR1D1 (ENSSHBG00005005656) THRA (ENSSHBG00005005701) MED24 (ENSSHBG00005005842) Golden eagle MODERN SPECIES 24 ENSACCG00020002498 EIF1 (ENSACCG00020002514) ENSACCG00020002559 ENSACCG00020002592 ENSACCG00020002614 ENSACCG00020002631 ENSACCG00020002646 ENSACCG00020002661 ENSACCG00020002680 ENSACCG00020002765 ENSACCG00020002840 KRT19 (ENSACCG00020002860) KRT15 (ENSACCG00020002881) KRT23 (ENSACCG00020002903) #20 KRT20 (ENSACCG00020002922) #21 KRT12 (ENSACCG00020002943) #22 KRT222 (ENSACCG00020002958) #29 SMARCE1 (ENSACCG00020003022) #31 CCR7 (ENSACCG00020003054) #32 TNS4 (ENSACCG00020003073) #33 IGFBP4 (ENSACCG00020003106) ENSACCG00020003118 TOP2A (ENSACCG00020003154) #34 RARA (ENSACCG00020003210) #36 CDC6 (ENSACCG00020003236) #37 ENSACCG00020003260 ENSACCG00020003276 RAPGEFL1 (ENSACCG00020003342) CASC3 (ENSACCG00020003399) MSL1 (ENSACCG00020003417) NR1D1 (ENSACCG00020003431) Galloanserae ANCESTRAL SPECIES 23 ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000165820.B ENSGT00950000183311 ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a.c ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT01080000258839 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Anatidae ANCESTRAL SPECIES 43 ENSGT00940000154664 ENSGT00390000012959.a ENSGT00940000156331 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00940000163247.t ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 Pink-footed goose MODERN SPECIES 435 ENSABRG00000016243 ENSABRG00000016231 KRT15 (ENSABRG00000016225) KRT23 (ENSABRG00000016223) #20 KRT20 (ENSABRG00000016220) #21 KRT12 (ENSABRG00000016217) #22 KRT222 (ENSABRG00000016210) #29 SMARCE1 (ENSABRG00000016203) #31 CCR7 (ENSABRG00000016200) #32 TNS4 (ENSABRG00000016196) #33 IGFBP4 (ENSABRG00000016191) ENSABRG00000016182 TOP2A (ENSABRG00000016177) #34 GJD3 (ENSABRG00000016175) RARA (ENSABRG00000016172) #36 Duck MODERN SPECIES 19 NKIRAS2 (ENSAPLG00000002856) DNAJC7 (ENSAPLG00000002392) CNP (ENSAPLG00000002170) ENSAPLG00000016067 KLHL11 (ENSAPLG00000030316) KLHL10 (ENSAPLG00000015963) ENSAPLG00000008725 ENSAPLG00000022579 ENSAPLG00000028586 ENSAPLG00000010116 ENSAPLG00000029963 ENSAPLG00000008997 KRT15 (ENSAPLG00000008949) KRT23 (ENSAPLG00000008879) #20 KRT20 (ENSAPLG00000008808) #21 KRT12 (ENSAPLG00000008362) #22 ENSAPLG00000025779 KRT222 (ENSAPLG00000008286) #29 SMARCE1 (ENSAPLG00000008102) #31 CCR7 (ENSAPLG00000008028) #32 TOP2A (ENSAPLG00000006390) #34 ENSAPLG00000000844 ENSAPLG00000000849 ENSAPLG00000000855 ENSAPLG00000000876 ENSAPLG00000023316 CRHR1 (ENSAPLG00000013119) ENSAPLG00000022503 ENSAPLG00000000706 ITGB3 (ENSAPLG00000004489) EFCAB3 (ENSAPLG00000022795) Phasianidae ANCESTRAL SPECIES 21 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a.c ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT01080000258839 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 ENSGT00940000160548 Phasianidae_b ANCESTRAL SPECIES 21 ENSGT00940000156395 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.u ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b ENSGT00940000165820.A.c.b ENSGT00940000165820.A.c.a ENSGT00950000182969.B.c.a.a.c.f.a.d ENSGT00950000182969.B.c.a.a.c.f.a.c ENSGT00940000155258.t ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT01080000258839 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 ENSGT00940000160548 Chicken MODERN SPECIES 19 ENSGALG00010021221 ENSGALG00010021209 EIF1 (ENSGALG00010022682) KRT17 (ENSGALG00010022946) KRT14 (ENSGALG00010026690) ENSGALG00010023183 ENSGALG00010026731 ENSGALG00010023089 ENSGALG00010026755 ENSGALG00010026719 ENSGALG00010022953 KRT24 (ENSGALG00010026706) KRT13 (ENSGALG00010022872) KRT23 (ENSGALG00010022817) #20 KRT40 (ENSGALG00010022786) #21 KRT12 (ENSGALG00010022765) #22 KRT222 (ENSGALG00010022725) #29 SMARCE1 (ENSGALG00010022547) #31 CCR7 (ENSGALG00010022529) #32 TNS4 (ENSGALG00010022522) #33 IGFBP4 (ENSGALG00010022511) ENSGALG00010022502 TOP2A (ENSGALG00010022483) #34 RARA (ENSGALG00010024581) #36 CDC6 (ENSGALG00010024548) #37 WIPF2 (ENSGALG00010024541) RAPGEFL1 (ENSGALG00010024539) CASC3 (ENSGALG00010024504) MSL1 (ENSGALG00010024679) NR1D1 (ENSGALG00010024675) MED24 (ENSGALG00010024666) Turkey MODERN SPECIES 21 ENSMGAG00000019618 #36 ENSMGAG00000009314 #34 ENSMGAG00000002851 TNS4 (ENSMGAG00000021108) #33 ENSMGAG00000002887 #31 ENSMGAG00000002880 #32 ENSMGAG00000022408 KRT19 (ENSMGAG00000003084) KRT23 (ENSMGAG00000003057) #20 KRT20 (ENSMGAG00000016371) #21 KRT12 (ENSMGAG00000017405) #22 KRT222 (ENSMGAG00000002908) #29 ENSMGAG00000002913 ENSMGAG00000020999 ENSMGAG00000016744 ENSMGAG00000003113 ENSMGAG00000016911 ENSMGAG00000017065 ENSMGAG00000016949 ENSMGAG00000016477 ENSMGAG00000016610 ENSMGAG00000016750 ENSMGAG00000010064 ENSMGAG00000022609 ENSMGAG00000006992 NT5C3B (ENSMGAG00000007006) Japanese quail MODERN SPECIES 19 FKBP10 (ENSCJPG00005004766) P3H4 (ENSCJPG00005004763) JUP (ENSCJPG00005004757) ENSCJPG00005004756 ENSCJPG00005004601 EIF1 (ENSCJPG00005004600) ENSCJPG00005004598 KRT13 (ENSCJPG00005004597) ENSCJPG00005004596 ENSCJPG00005004595 ENSCJPG00005004594 KRT19 (ENSCJPG00005004587) KRT15 (ENSCJPG00005004586) KRT23 (ENSCJPG00005004577) #20 KRT20 (ENSCJPG00005004576) #21 KRT12 (ENSCJPG00005004575) #22 KRT222 (ENSCJPG00005004574) #29 SMARCE1 (ENSCJPG00005004573) #31 CCR7 (ENSCJPG00005004572) #32 TNS4 (ENSCJPG00005004571) #33 IGFBP4 (ENSCJPG00005004570) ENSCJPG00005004568 TOP2A (ENSCJPG00005002732) #34 RARA (ENSCJPG00005002716) #36 CDC6 (ENSCJPG00005002714) #37 WIPF2 (ENSCJPG00005002712) RAPGEFL1 (ENSCJPG00005002710) CASC3 (ENSCJPG00005002704) NR1D1 (ENSCJPG00005002456) THRA (ENSCJPG00005002447) MED24 (ENSCJPG00005002441) African ostrich MODERN SPECIES 1063 CNP (ENSSCUG00000013817) ODAD4 (ENSSCUG00000013820) ACLY (ENSSCUG00000013827) KLHL11 (ENSSCUG00000013838) KLHL10 (ENSSCUG00000013839) NT5C3B (ENSSCUG00000013841) JUP (ENSSCUG00000013848) KRT15 (ENSSCUG00000013863) ENSSCUG00000013869 ENSSCUG00000013874 ENSSCUG00000013880 ENSSCUG00000013882 ENSSCUG00000013888 KRT23 (ENSSCUG00000013894) #20 KRT20 (ENSSCUG00000013897) #21 KRT12 (ENSSCUG00000013904) #22 KRT222 (ENSSCUG00000013911) #29 SMARCE1 (ENSSCUG00000013919) #31 CCR7 (ENSSCUG00000013931) #32 TNS4 (ENSSCUG00000013935) #33 Lepidosauria ANCESTRAL SPECIES 23 ENSGT00940000162183 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000155258.t ENSGT00940000163247 ENSGT00950000182969.B.c.a.a.c.f.b.j ENSGT00950000183311 ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b.i ENSGT00940000165820.A ENSGT00940000154403.b ENSGT00940000161311.d ENSGT00940000161311.c ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849.p.b #23 ENSGT00940000160849.p.a #23 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 tuatara MODERN SPECIES 1950 FKBP10 (ENSSPUG00000013421) P3H4 (ENSSPUG00000013436) JUP (ENSSPUG00000013455) ENSSPUG00000013483 EIF1 (ENSSPUG00000013490) ENSSPUG00000013500 ENSSPUG00000013511 ENSSPUG00000013534 ENSSPUG00000013544 ENSSPUG00000013576 KRT15 (ENSSPUG00000013597) ENSSPUG00000013612 ENSSPUG00000013664 KRT23 (ENSSPUG00000013704) #20 KRT20 (ENSSPUG00000013731) #21 KRT12 (ENSSPUG00000013794) #22 KRT10 (ENSSPUG00000013830) #23 ENSSPUG00000013886 #28 ENSSPUG00000013896 #28 KRT222 (ENSSPUG00000013908) #29 SMARCE1 (ENSSPUG00000013927) #31 Episquamata ANCESTRAL SPECIES 5 ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000155258.t ENSGT00940000163247 ENSGT00950000182969.B.c.a.a.c.f.b.j ENSGT00950000183311 ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b.i ENSGT00940000165820.A.b ENSGT00940000165820.A.a ENSGT00940000154403.b ENSGT00940000161311.d ENSGT00940000161311.c ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382 #22 ENSGT00940000160849.p.b #23 ENSGT00940000160849.p.a #23 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Toxicofera ANCESTRAL SPECIES 4 ENSGT00940000162183 ENSGT00940000156395 ENSGT00940000153814.b ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247 ENSGT00950000182969.B.c.a.a.c.f.b.j ENSGT00950000183311 ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b.i ENSGT00940000165820.A.b ENSGT00940000165820.A.a ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382 #22 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES 5 ENSGT00940000156395 ENSGT00940000153814.b ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.q ENSGT00950000182969.B.c.a.a.c.g ENSGT00940000163247.p ENSGT00940000154403.a.b ENSGT00950000182969.B.c.a.a.c.f.b.j ENSGT00950000183311 ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.f #22 ENSGT00940000160849.p.b #23 ENSGT00940000159382.e #22 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539.e #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 ENSGT00390000006930 Indian cobra MODERN SPECIES 337 CRHR1 (ENSNNAG00000005231) ENSNNAG00000004950 JUP (ENSNNAG00000004885) P3H4 (ENSNNAG00000004861) ENSNNAG00000004857 EIF1 (ENSNNAG00000004838) ENSNNAG00000004052 ENSNNAG00000003954 ENSNNAG00000003935 KRT13 (ENSNNAG00000003849) ENSNNAG00000003812 KRT15 (ENSNNAG00000003755) KRT23 (ENSNNAG00000003719) #20 ENSNNAG00000003608 KRT10 (ENSNNAG00000003431) #23 KRT12 (ENSNNAG00000003388) #22 ENSNNAG00000003221 #28 ENSNNAG00000015547 #28 KRT222 (ENSNNAG00000015493) #29 SMARCE1 (ENSNNAG00000015477) #31 CCR7 (ENSNNAG00000015470) #32 TNS4 (ENSNNAG00000015322) #33 IGFBP4 (ENSNNAG00000015293) ENSNNAG00000015270 ENSNNAG00000015220 #34 ENSNNAG00000015184 #34 GJD3 (ENSNNAG00000015167) RARA (ENSNNAG00000015151) #36 CDC6 (ENSNNAG00000015116) #37 ENSNNAG00000015111 RAPGEFL1 (ENSNNAG00000015063) Elapidae_a ANCESTRAL SPECIES 142 ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.f #22 ENSGT00940000160849.p.b #23 ENSGT00940000159382.e #22 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A Acanthophiinae ANCESTRAL SPECIES 133 ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.f #22 ENSGT00940000160849.p.b #23 ENSGT00940000159382.e #22 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A Eastern brown snake MODERN SPECIES 197 ENSPTXG00000015877 KRT15 (ENSPTXG00000015872) KRT23 (ENSPTXG00000015869) #20 ENSPTXG00000015868 KRT10 (ENSPTXG00000015858) #23 KRT12 (ENSPTXG00000015850) #22 ENSPTXG00000015786 #28 ENSPTXG00000015780 #28 KRT222 (ENSPTXG00000015777) #29 SMARCE1 (ENSPTXG00000015776) #31 CCR7 (ENSPTXG00000015775) #32 TNS4 (ENSPTXG00000015773) #33 IGFBP4 (ENSPTXG00000015772) Mainland tiger snake MODERN SPECIES 274 ENSNSUG00000008380 ENSNSUG00000008381 KRT23 (ENSNSUG00000008382) #20 ENSNSUG00000008383 ENSNSUG00000008385 #22 ENSNSUG00000008397 #22 ENSNSUG00000008398 #28 ENSNSUG00000008399 #28 KRT222 (ENSNSUG00000008400) #29 SMARCE1 (ENSNSUG00000008401) #31 CCR7 (ENSNSUG00000008402) #32 ENSNSUG00000008403 TNS4 (ENSNSUG00000008404) #33 ENSNSUG00000008406 IGFBP4 (ENSNSUG00000008408) ENSNSUG00000008409 Blue-lipped sea krait MODERN SPECIES 4298 ENSLLTG00000009807 KRT12 (ENSLLTG00000006738) #22 ENSLLTG00000006763 #28 Elapidae ANCESTRAL SPECIES 5 ENSGT00940000162770.p.a.a ENSGT00940000162183 ENSGT00940000156395 ENSGT00940000153814.b ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000163247.q ENSGT00950000182969.B.c.a.a.c.g ENSGT00940000163247.p ENSGT00940000154403.a.b ENSGT00950000182969.B.c.a.a.c.f.b.j ENSGT00950000183311 ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.f #22 ENSGT00940000160849.p.b #23 ENSGT00940000159382.e #22 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A ENSGT00940000157539.e #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 Elapidae_a ANCESTRAL SPECIES 142 ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.f #22 ENSGT00940000160849.p.b #23 ENSGT00940000159382.e #22 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A Acanthophiinae ANCESTRAL SPECIES 133 ENSGT00940000154403.b ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.f #22 ENSGT00940000160849.p.b #23 ENSGT00940000159382.e #22 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000158212.A Mainland tiger snake MODERN SPECIES 274 ENSNSUG00000008380 ENSNSUG00000008381 KRT23 (ENSNSUG00000008382) #20 ENSNSUG00000008383 ENSNSUG00000008385 #22 ENSNSUG00000008397 #22 ENSNSUG00000008398 #28 ENSNSUG00000008399 #28 KRT222 (ENSNSUG00000008400) #29 SMARCE1 (ENSNSUG00000008401) #31 CCR7 (ENSNSUG00000008402) #32 ENSNSUG00000008403 TNS4 (ENSNSUG00000008404) #33 ENSNSUG00000008406 IGFBP4 (ENSNSUG00000008408) ENSNSUG00000008409 Lizard DUPLICATION Lizard MODERN SPECIES 5 EIF1 (ENSACAG00000036849) KRT19 (ENSACAG00000028562) ENSACAG00000037211 ENSACAG00000026769 ENSACAG00000035898 ENSACAG00000035166 ENSACAG00000017876 ENSACAG00000017874 ENSACAG00000027366 ENSACAG00000029628 ENSACAG00000017868 KRT36 (ENSACAG00000015803) KRT15 (ENSACAG00000028720) KRT23 (ENSACAG00000029308) #20 ENSACAG00000036063 KRT12 (ENSACAG00000017866) #22 ENSACAG00000043829 #22 krt36 (ENSACAG00000017860) #28 ENSACAG00000028648 #28 ENSACAG00000043058 ENSACAG00000038974 SMARCE1 (ENSACAG00000016067) #31 CCR7 (ENSACAG00000042682) #32 TNS4 (ENSACAG00000016132) #33 IGFBP4 (ENSACAG00000035156) TOP2A (ENSACAG00000001904) #34 GJD3 (ENSACAG00000002406) ENSACAG00000040322 ENSACAG00000040379 RARA (ENSACAG00000002413) #36 ENSACAG00000040422 Lizard MODERN SPECIES 5 KRT19 (ENSACAG00000028562) ENSACAG00000037211 ENSACAG00000026769 ENSACAG00000035898 ENSACAG00000035166 ENSACAG00000017876 ENSACAG00000017874 ENSACAG00000027366 ENSACAG00000029628 ENSACAG00000017868 KRT36 (ENSACAG00000015803) KRT15 (ENSACAG00000028720) KRT23 (ENSACAG00000029308) #20 ENSACAG00000036063 KRT12 (ENSACAG00000017866) #22 ENSACAG00000043829 #22 krt36 (ENSACAG00000017860) #28 ENSACAG00000028648 #28 ENSACAG00000043058 ENSACAG00000038974 SMARCE1 (ENSACAG00000016067) #31 CCR7 (ENSACAG00000042682) #32 TNS4 (ENSACAG00000016132) #33 IGFBP4 (ENSACAG00000035156) TOP2A (ENSACAG00000001904) #34 GJD3 (ENSACAG00000002406) ENSACAG00000040322 ENSACAG00000040379 RARA (ENSACAG00000002413) #36 ENSACAG00000040422 CDC6 (ENSACAG00000002503) #37 Laterata ANCESTRAL SPECIES 11 ENSGT00940000153814.b ENSGT01030000235196 ENSGT00390000015789.c ENSGT00940000155258.t ENSGT00940000163247 ENSGT00950000182969.B.c.a.a.c.f.b.j ENSGT00940000165820.B ENSGT00950000182969.B.c.a.a.c.f.b.i ENSGT00940000165820.A.b ENSGT00940000165820.A.a ENSGT00940000154403.b ENSGT00940000161311.d ENSGT00940000161311.c ENSGT00940000161077 #20 ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382 #22 ENSGT00940000160849.p.b #23 ENSGT00940000160849.p.a #23 ENSGT00940000161783.a #28 ENSGT00940000161783.b #28 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000155557 ENSGT00940000160144 Argentine black and white tegu MODERN SPECIES 32 ENSSMRG00000002816 EIF1 (ENSSMRG00000002817) ENSSMRG00000002819 ENSSMRG00000002850 ENSSMRG00000002871 KRT17 (ENSSMRG00000003112) ENSSMRG00000003114 ENSSMRG00000003116 ENSSMRG00000003125 ENSSMRG00000003133 ENSSMRG00000003224 KRT15 (ENSSMRG00000003225) ENSSMRG00000003231 ENSSMRG00000004380 KRT23 (ENSSMRG00000004509) #20 KRT12 (ENSSMRG00000004542) #22 ENSSMRG00000004555 #23 ENSSMRG00000004566 #23 ENSSMRG00000004576 #28 ENSSMRG00000004729 #28 KRT222 (ENSSMRG00000005317) #29 SMARCE1 (ENSSMRG00000005320) #31 CCR7 (ENSSMRG00000005327) #32 TNS4 (ENSSMRG00000005331) #33 IGFBP4 (ENSSMRG00000005431) ENSSMRG00000005432 ENSSMRG00000005445 #34 GJD3 (ENSSMRG00000005462) RARA (ENSSMRG00000005486) #36 CDC6 (ENSSMRG00000005498) #37 WIPF2 (ENSSMRG00000005505) Common wall lizard MODERN SPECIES 4 ENSPMRG00000016378 ENSPMRG00000016387 EIF1 (ENSPMRG00000016400) ENSPMRG00000016412 ENSPMRG00000016440 ENSPMRG00000016447 ENSPMRG00000016458 ENSPMRG00000016468 ENSPMRG00000016471 ENSPMRG00000016479 KRT15 (ENSPMRG00000016495) ENSPMRG00000016555 ENSPMRG00000016684 KRT23 (ENSPMRG00000016687) #20 ENSPMRG00000016695 KRT12 (ENSPMRG00000016698) #22 ENSPMRG00000016700 #23 ENSPMRG00000016710 #23 ENSPMRG00000016716 #28 ENSPMRG00000016724 #28 KRT222 (ENSPMRG00000016731) #29 SMARCE1 (ENSPMRG00000016736) #31 CCR7 (ENSPMRG00000016748) #32 TNS4 (ENSPMRG00000016753) #33 IGFBP4 (ENSPMRG00000016758) ENSPMRG00000016767 TOP2A (ENSPMRG00000016771) #34 GJD3 (ENSPMRG00000016782) RARA (ENSPMRG00000016786) #36 CDC6 (ENSPMRG00000016792) #37 WIPF2 (ENSPMRG00000016795) Anura DUPLICATION Anura DUPLICATION Anura DUPLICATION Anura ANCESTRAL SPECIES 15 ENSGT00390000014792.a ENSGT00390000015789.c ENSGT00940000155258 ENSGT00950000182969.B.c.a.a.c ENSGT00950000183311.a ENSGT00940000154403 ENSGT00950000183311.b.a ENSGT00950000183311.b.b ENSGT00940000161311 ENSGT00940000161077 #20 ENSGT00950000182969.B.d ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.m.b.b #22 ENSGT00940000159382.m.b.a #22 ENSGT00940000159382.m.a.b #22 ENSGT00940000159382.m.a.a #22 ENSGT00940000159382.n #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938.d ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000027000 ENSLLEG00000027759 ENSLLEG00000027858 ENSLLEG00000027886 KRT23 (ENSLLEG00000027913) #20 ENSLLEG00000027954 ENSLLEG00000028003 ENSLLEG00000028013 ENSLLEG00000028070 #22 ENSLLEG00000028103 #22 ENSLLEG00000028166 #22 ENSLLEG00000028459 #22 ENSLLEG00000028494 #22 ENSLLEG00000028611 #22 ENSLLEG00000028654 #22 ENSLLEG00000028707 #22 ENSLLEG00000028813 ENSLLEG00000028826 #22 ENSLLEG00000028876 #29 ENSLLEG00000029215 SMARCE1 (ENSLLEG00000029236) #31 ENSLLEG00000029469 CCR7 (ENSLLEG00000029475) #32 ENSLLEG00000029481 TNS4 (ENSLLEG00000029493) #33 IGFBP4 (ENSLLEG00000029557) ENSLLEG00000029595 ENSLLEG00000029602 ENSLLEG00000029623 ENSLLEG00000029646 ENSLLEG00000021318 Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000026919 ENSLLEG00000027000 ENSLLEG00000027759 ENSLLEG00000027858 ENSLLEG00000027886 KRT23 (ENSLLEG00000027913) #20 ENSLLEG00000027954 ENSLLEG00000028003 ENSLLEG00000028013 ENSLLEG00000028070 #22 ENSLLEG00000028103 #22 ENSLLEG00000028166 #22 ENSLLEG00000028459 #22 ENSLLEG00000028494 #22 ENSLLEG00000028611 #22 ENSLLEG00000028654 #22 ENSLLEG00000028707 #22 ENSLLEG00000028813 ENSLLEG00000028826 #22 ENSLLEG00000028876 #29 ENSLLEG00000029215 SMARCE1 (ENSLLEG00000029236) #31 ENSLLEG00000029469 CCR7 (ENSLLEG00000029475) #32 ENSLLEG00000029481 TNS4 (ENSLLEG00000029493) #33 IGFBP4 (ENSLLEG00000029557) ENSLLEG00000029595 ENSLLEG00000029602 ENSLLEG00000029623 ENSLLEG00000029646 Frog DUPLICATION Frog DUPLICATION Frog DUPLICATION Frog MODERN SPECIES 1 krt70 (ENSXETG00000012488) krt19 (ENSXETG00000012482) krt9.1 (ENSXETG00000038225) krt9.2 (ENSXETG00000035234) krt15.1 (ENSXETG00000029985) krt15.2 (ENSXETG00000017467) krt34 (ENSXETG00000036344) krt23 (ENSXETG00000040013) #20 ENSXETG00000045090 krt12.1 (ENSXETG00000045813) krt12.2 (ENSXETG00000021341) #22 krt20 (ENSXETG00000030511) #21 krt12.3 (ENSXETG00000025345) #22 krt12.6 (ENSXETG00000037468) #22 krt53 (ENSXETG00000031985) #22 ENSXETG00000041456 #22 ENSXETG00000043984 #22 krt55 (ENSXETG00000025340) #22 krt55 (ENSXETG00000025338) #22 krt222 (ENSXETG00000036910) #29 smarce1 (ENSXETG00000021355) #31 ccr7 (ENSXETG00000042814) #32 tns4 (ENSXETG00000046357) #33 igfbp4 (ENSXETG00000042693) arf11l.2 (ENSXETG00000044010) col15a1 (ENSXETG00000036828) top2a (ENSXETG00000021362) #34 gjd3 (ENSXETG00000042781) ENSXETG00000048306 rara (ENSXETG00000024390) #36 wipf2 (ENSXETG00000024394) #37 Frog MODERN SPECIES 1 krt19 (ENSXETG00000012482) krt9.1 (ENSXETG00000038225) krt9.2 (ENSXETG00000035234) krt15.1 (ENSXETG00000029985) krt15.2 (ENSXETG00000017467) krt34 (ENSXETG00000036344) krt23 (ENSXETG00000040013) #20 ENSXETG00000045090 krt12.1 (ENSXETG00000045813) krt12.2 (ENSXETG00000021341) #22 krt20 (ENSXETG00000030511) #21 krt12.3 (ENSXETG00000025345) #22 krt12.6 (ENSXETG00000037468) #22 krt53 (ENSXETG00000031985) #22 ENSXETG00000041456 #22 ENSXETG00000043984 #22 krt55 (ENSXETG00000025340) #22 krt55 (ENSXETG00000025338) #22 krt222 (ENSXETG00000036910) #29 smarce1 (ENSXETG00000021355) #31 ccr7 (ENSXETG00000042814) #32 tns4 (ENSXETG00000046357) #33 igfbp4 (ENSXETG00000042693) arf11l.2 (ENSXETG00000044010) col15a1 (ENSXETG00000036828) top2a (ENSXETG00000021362) #34 gjd3 (ENSXETG00000042781) ENSXETG00000048306 rara (ENSXETG00000024390) #36 wipf2 (ENSXETG00000024394) #37 rapgefl1 (ENSXETG00000024396) Frog MODERN SPECIES 1 krt9.1 (ENSXETG00000038225) krt9.2 (ENSXETG00000035234) krt15.1 (ENSXETG00000029985) krt15.2 (ENSXETG00000017467) krt34 (ENSXETG00000036344) krt23 (ENSXETG00000040013) #20 ENSXETG00000045090 krt12.1 (ENSXETG00000045813) krt12.2 (ENSXETG00000021341) #22 krt20 (ENSXETG00000030511) #21 krt12.3 (ENSXETG00000025345) #22 krt12.6 (ENSXETG00000037468) #22 krt53 (ENSXETG00000031985) #22 ENSXETG00000041456 #22 ENSXETG00000043984 #22 krt55 (ENSXETG00000025340) #22 krt55 (ENSXETG00000025338) #22 krt222 (ENSXETG00000036910) #29 smarce1 (ENSXETG00000021355) #31 ccr7 (ENSXETG00000042814) #32 tns4 (ENSXETG00000046357) #33 igfbp4 (ENSXETG00000042693) arf11l.2 (ENSXETG00000044010) col15a1 (ENSXETG00000036828) top2a (ENSXETG00000021362) #34 gjd3 (ENSXETG00000042781) ENSXETG00000048306 rara (ENSXETG00000024390) #36 wipf2 (ENSXETG00000024394) #37 rapgefl1 (ENSXETG00000024396) casc3 (ENSXETG00000024395) Frog MODERN SPECIES 1 eif1 (ENSXETG00000025051) krt70 (ENSXETG00000012488) krt19 (ENSXETG00000012482) krt9.1 (ENSXETG00000038225) krt9.2 (ENSXETG00000035234) krt15.1 (ENSXETG00000029985) krt15.2 (ENSXETG00000017467) krt34 (ENSXETG00000036344) krt23 (ENSXETG00000040013) #20 ENSXETG00000045090 krt12.1 (ENSXETG00000045813) krt12.2 (ENSXETG00000021341) #22 krt20 (ENSXETG00000030511) #21 krt12.3 (ENSXETG00000025345) #22 krt12.6 (ENSXETG00000037468) #22 krt53 (ENSXETG00000031985) #22 ENSXETG00000041456 #22 ENSXETG00000043984 #22 krt55 (ENSXETG00000025340) #22 krt55 (ENSXETG00000025338) #22 krt222 (ENSXETG00000036910) #29 smarce1 (ENSXETG00000021355) #31 ccr7 (ENSXETG00000042814) #32 tns4 (ENSXETG00000046357) #33 igfbp4 (ENSXETG00000042693) arf11l.2 (ENSXETG00000044010) col15a1 (ENSXETG00000036828) top2a (ENSXETG00000021362) #34 gjd3 (ENSXETG00000042781) ENSXETG00000048306 rara (ENSXETG00000024390) #36 Anura ANCESTRAL SPECIES 15 ENSGT00940000162183 ENSGT00390000014792.a ENSGT00390000015789.c ENSGT00940000155258 ENSGT00950000182969.B.c.a.a.c ENSGT00950000183311.a ENSGT00940000154403 ENSGT00950000183311.b.a ENSGT00950000183311.b.b ENSGT00940000161311 ENSGT00940000161077 #20 ENSGT00950000182969.B.d ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.m.b.b #22 ENSGT00940000159382.m.b.a #22 ENSGT00940000159382.m.a.b #22 ENSGT00940000159382.m.a.a #22 ENSGT00940000159382.n #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938.d ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000160144 ENSGT00390000006930 Frog MODERN SPECIES 1 terf2ip (ENSXETG00000012487) eif1 (ENSXETG00000025051) krt70 (ENSXETG00000012488) krt19 (ENSXETG00000012482) krt9.1 (ENSXETG00000038225) krt9.2 (ENSXETG00000035234) krt15.1 (ENSXETG00000029985) krt15.2 (ENSXETG00000017467) krt34 (ENSXETG00000036344) krt23 (ENSXETG00000040013) #20 ENSXETG00000045090 krt12.1 (ENSXETG00000045813) krt12.2 (ENSXETG00000021341) #22 krt20 (ENSXETG00000030511) #21 krt12.3 (ENSXETG00000025345) #22 krt12.6 (ENSXETG00000037468) #22 krt53 (ENSXETG00000031985) #22 ENSXETG00000041456 #22 ENSXETG00000043984 #22 krt55 (ENSXETG00000025340) #22 krt55 (ENSXETG00000025338) #22 krt222 (ENSXETG00000036910) #29 smarce1 (ENSXETG00000021355) #31 ccr7 (ENSXETG00000042814) #32 tns4 (ENSXETG00000046357) #33 igfbp4 (ENSXETG00000042693) arf11l.2 (ENSXETG00000044010) col15a1 (ENSXETG00000036828) top2a (ENSXETG00000021362) #34 gjd3 (ENSXETG00000042781) ENSXETG00000048306 Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000026866 ENSLLEG00000026919 ENSLLEG00000027000 ENSLLEG00000027759 ENSLLEG00000027858 ENSLLEG00000027886 KRT23 (ENSLLEG00000027913) #20 ENSLLEG00000027954 ENSLLEG00000028003 ENSLLEG00000028013 ENSLLEG00000028070 #22 ENSLLEG00000028103 #22 ENSLLEG00000028166 #22 ENSLLEG00000028459 #22 ENSLLEG00000028494 #22 ENSLLEG00000028611 #22 ENSLLEG00000028654 #22 ENSLLEG00000028707 #22 ENSLLEG00000028813 ENSLLEG00000028826 #22 ENSLLEG00000028876 #29 ENSLLEG00000029215 SMARCE1 (ENSLLEG00000029236) #31 ENSLLEG00000029469 CCR7 (ENSLLEG00000029475) #32 ENSLLEG00000029481 TNS4 (ENSLLEG00000029493) #33 IGFBP4 (ENSLLEG00000029557) ENSLLEG00000029595 ENSLLEG00000029602 ENSLLEG00000029623 Anura DUPLICATION Anura ANCESTRAL SPECIES 15 ENSGT00940000156395 ENSGT00940000162183 ENSGT00390000014792.a ENSGT00390000015789.c ENSGT00940000155258 ENSGT00950000182969.B.c.a.a.c ENSGT00950000183311.a ENSGT00940000154403 ENSGT00950000183311.b.a ENSGT00950000183311.b.b ENSGT00940000161311 ENSGT00940000161077 #20 ENSGT00950000182969.B.d ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.m.b.b #22 ENSGT00940000159382.m.b.a #22 ENSGT00940000159382.m.a.b #22 ENSGT00940000159382.m.a.a #22 ENSGT00940000159382.n #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938.d ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000160144 Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000026765 ENSLLEG00000026866 ENSLLEG00000026919 ENSLLEG00000027000 ENSLLEG00000027759 ENSLLEG00000027858 ENSLLEG00000027886 KRT23 (ENSLLEG00000027913) #20 ENSLLEG00000027954 ENSLLEG00000028003 ENSLLEG00000028013 ENSLLEG00000028070 #22 ENSLLEG00000028103 #22 ENSLLEG00000028166 #22 ENSLLEG00000028459 #22 ENSLLEG00000028494 #22 ENSLLEG00000028611 #22 ENSLLEG00000028654 #22 ENSLLEG00000028707 #22 ENSLLEG00000028813 ENSLLEG00000028826 #22 ENSLLEG00000028876 #29 ENSLLEG00000029215 SMARCE1 (ENSLLEG00000029236) #31 ENSLLEG00000029469 CCR7 (ENSLLEG00000029475) #32 ENSLLEG00000029481 TNS4 (ENSLLEG00000029493) #33 IGFBP4 (ENSLLEG00000029557) ENSLLEG00000029595 ENSLLEG00000029602 Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000026388 ENSLLEG00000026422 ENSLLEG00000026765 ENSLLEG00000026866 ENSLLEG00000026919 ENSLLEG00000027000 ENSLLEG00000027759 ENSLLEG00000027858 ENSLLEG00000027886 KRT23 (ENSLLEG00000027913) #20 ENSLLEG00000027954 ENSLLEG00000028003 ENSLLEG00000028013 ENSLLEG00000028070 #22 ENSLLEG00000028103 #22 ENSLLEG00000028166 #22 ENSLLEG00000028459 #22 ENSLLEG00000028494 #22 ENSLLEG00000028611 #22 ENSLLEG00000028654 #22 ENSLLEG00000028707 #22 ENSLLEG00000028813 ENSLLEG00000028826 #22 ENSLLEG00000028876 #29 ENSLLEG00000029215 SMARCE1 (ENSLLEG00000029236) #31 ENSLLEG00000029469 CCR7 (ENSLLEG00000029475) #32 ENSLLEG00000029481 TNS4 (ENSLLEG00000029493) #33 IGFBP4 (ENSLLEG00000029557) Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000026422 ENSLLEG00000026765 ENSLLEG00000026866 ENSLLEG00000026919 ENSLLEG00000027000 ENSLLEG00000027759 ENSLLEG00000027858 ENSLLEG00000027886 KRT23 (ENSLLEG00000027913) #20 ENSLLEG00000027954 ENSLLEG00000028003 ENSLLEG00000028013 ENSLLEG00000028070 #22 ENSLLEG00000028103 #22 ENSLLEG00000028166 #22 ENSLLEG00000028459 #22 ENSLLEG00000028494 #22 ENSLLEG00000028611 #22 ENSLLEG00000028654 #22 ENSLLEG00000028707 #22 ENSLLEG00000028813 ENSLLEG00000028826 #22 ENSLLEG00000028876 #29 ENSLLEG00000029215 SMARCE1 (ENSLLEG00000029236) #31 ENSLLEG00000029469 CCR7 (ENSLLEG00000029475) #32 ENSLLEG00000029481 TNS4 (ENSLLEG00000029493) #33 IGFBP4 (ENSLLEG00000029557) ENSLLEG00000029595 Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000026329 ENSLLEG00000026388 ENSLLEG00000026422 ENSLLEG00000026765 ENSLLEG00000026866 ENSLLEG00000026919 ENSLLEG00000027000 ENSLLEG00000027759 ENSLLEG00000027858 ENSLLEG00000027886 KRT23 (ENSLLEG00000027913) #20 ENSLLEG00000027954 ENSLLEG00000028003 ENSLLEG00000028013 ENSLLEG00000028070 #22 ENSLLEG00000028103 #22 ENSLLEG00000028166 #22 ENSLLEG00000028459 #22 ENSLLEG00000028494 #22 ENSLLEG00000028611 #22 ENSLLEG00000028654 #22 ENSLLEG00000028707 #22 ENSLLEG00000028813 ENSLLEG00000028826 #22 ENSLLEG00000028876 #29 ENSLLEG00000029215 SMARCE1 (ENSLLEG00000029236) #31 ENSLLEG00000029469 CCR7 (ENSLLEG00000029475) #32 ENSLLEG00000029481 TNS4 (ENSLLEG00000029493) #33 Frog MODERN SPECIES 1 gast (ENSXETG00000012490) terf2ip (ENSXETG00000012487) eif1 (ENSXETG00000025051) krt70 (ENSXETG00000012488) krt19 (ENSXETG00000012482) krt9.1 (ENSXETG00000038225) krt9.2 (ENSXETG00000035234) krt15.1 (ENSXETG00000029985) krt15.2 (ENSXETG00000017467) krt34 (ENSXETG00000036344) krt23 (ENSXETG00000040013) #20 ENSXETG00000045090 krt12.1 (ENSXETG00000045813) krt12.2 (ENSXETG00000021341) #22 krt20 (ENSXETG00000030511) #21 krt12.3 (ENSXETG00000025345) #22 krt12.6 (ENSXETG00000037468) #22 krt53 (ENSXETG00000031985) #22 ENSXETG00000041456 #22 ENSXETG00000043984 #22 krt55 (ENSXETG00000025340) #22 krt55 (ENSXETG00000025338) #22 krt222 (ENSXETG00000036910) #29 smarce1 (ENSXETG00000021355) #31 ccr7 (ENSXETG00000042814) #32 tns4 (ENSXETG00000046357) #33 igfbp4 (ENSXETG00000042693) arf11l.2 (ENSXETG00000044010) col15a1 (ENSXETG00000036828) top2a (ENSXETG00000021362) #34 gjd3 (ENSXETG00000042781) Anura ANCESTRAL SPECIES 15 ENSGT00940000153814.b ENSGT00940000156395 ENSGT00940000162183 ENSGT00390000014792.a ENSGT00390000015789.c ENSGT00940000155258 ENSGT00950000182969.B.c.a.a.c ENSGT00950000183311.a ENSGT00940000154403 ENSGT00950000183311.b.a ENSGT00950000183311.b.b ENSGT00940000161311 ENSGT00940000161077 #20 ENSGT00950000182969.B.d ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.m.b.b #22 ENSGT00940000159382.m.b.a #22 ENSGT00940000159382.m.a.b #22 ENSGT00940000159382.m.a.a #22 ENSGT00940000159382.n #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938.d ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000026285 ENSLLEG00000026329 ENSLLEG00000026388 ENSLLEG00000026422 ENSLLEG00000026765 ENSLLEG00000026866 ENSLLEG00000026919 ENSLLEG00000027000 ENSLLEG00000027759 ENSLLEG00000027858 ENSLLEG00000027886 KRT23 (ENSLLEG00000027913) #20 ENSLLEG00000027954 ENSLLEG00000028003 ENSLLEG00000028013 ENSLLEG00000028070 #22 ENSLLEG00000028103 #22 ENSLLEG00000028166 #22 ENSLLEG00000028459 #22 ENSLLEG00000028494 #22 ENSLLEG00000028611 #22 ENSLLEG00000028654 #22 ENSLLEG00000028707 #22 ENSLLEG00000028813 ENSLLEG00000028826 #22 ENSLLEG00000028876 #29 ENSLLEG00000029215 SMARCE1 (ENSLLEG00000029236) #31 ENSLLEG00000029469 CCR7 (ENSLLEG00000029475) #32 ENSLLEG00000029481 Frog MODERN SPECIES 1 jup (ENSXETG00000006970) hap1 (ENSXETG00000012489) gast (ENSXETG00000012490) terf2ip (ENSXETG00000012487) eif1 (ENSXETG00000025051) krt70 (ENSXETG00000012488) krt19 (ENSXETG00000012482) krt9.1 (ENSXETG00000038225) krt9.2 (ENSXETG00000035234) krt15.1 (ENSXETG00000029985) krt15.2 (ENSXETG00000017467) krt34 (ENSXETG00000036344) krt23 (ENSXETG00000040013) #20 ENSXETG00000045090 krt12.1 (ENSXETG00000045813) krt12.2 (ENSXETG00000021341) #22 krt20 (ENSXETG00000030511) #21 krt12.3 (ENSXETG00000025345) #22 krt12.6 (ENSXETG00000037468) #22 krt53 (ENSXETG00000031985) #22 ENSXETG00000041456 #22 ENSXETG00000043984 #22 krt55 (ENSXETG00000025340) #22 krt55 (ENSXETG00000025338) #22 krt222 (ENSXETG00000036910) #29 smarce1 (ENSXETG00000021355) #31 ccr7 (ENSXETG00000042814) #32 tns4 (ENSXETG00000046357) #33 igfbp4 (ENSXETG00000042693) arf11l.2 (ENSXETG00000044010) col15a1 (ENSXETG00000036828) Anura ANCESTRAL SPECIES 15 ENSGT00390000015789.c ENSGT00940000155258 ENSGT00950000182969.B.c.a.a.c ENSGT00950000183311.a ENSGT00940000154403 ENSGT00950000183311.b.a ENSGT00950000183311.b.b ENSGT00940000161311 ENSGT00940000161077 #20 ENSGT00950000182969.B.d ENSGT00950000182969.B.c.a.a.d ENSGT00940000159382.m.b.b #22 ENSGT00940000159382.m.b.a #22 ENSGT00940000159382.m.a.b #22 ENSGT00940000159382.m.a.a #22 ENSGT00940000159382.n #22 ENSGT00940000159655 #29 ENSGT00390000003628.b #31 ENSGT01030000234667.a.a.a.a.b #32 ENSGT00940000160142 #33 ENSGT00940000159647 ENSGT00940000165938.d ENSGT00940000158212.A ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #36 ENSGT00530000063498.A #37 ENSGT00940000160144 ENSGT00390000006930 ENSGT00390000018292 ENSGT00940000160548 Frog MODERN SPECIES 1 krt9.2 (ENSXETG00000035234) krt15.1 (ENSXETG00000029985) krt15.2 (ENSXETG00000017467) krt34 (ENSXETG00000036344) krt23 (ENSXETG00000040013) #20 ENSXETG00000045090 krt12.1 (ENSXETG00000045813) krt12.2 (ENSXETG00000021341) #22 krt20 (ENSXETG00000030511) #21 krt12.3 (ENSXETG00000025345) #22 krt12.6 (ENSXETG00000037468) #22 krt53 (ENSXETG00000031985) #22 ENSXETG00000041456 #22 ENSXETG00000043984 #22 krt55 (ENSXETG00000025340) #22 krt55 (ENSXETG00000025338) #22 krt222 (ENSXETG00000036910) #29 smarce1 (ENSXETG00000021355) #31 ccr7 (ENSXETG00000042814) #32 tns4 (ENSXETG00000046357) #33 igfbp4 (ENSXETG00000042693) arf11l.2 (ENSXETG00000044010) col15a1 (ENSXETG00000036828) top2a (ENSXETG00000021362) #34 gjd3 (ENSXETG00000042781) ENSXETG00000048306 rara (ENSXETG00000024390) #36 wipf2 (ENSXETG00000024394) #37 rapgefl1 (ENSXETG00000024396) casc3 (ENSXETG00000024395) msl1 (ENSXETG00000027594) Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000027858 ENSLLEG00000027886 KRT23 (ENSLLEG00000027913) #20 ENSLLEG00000027954 ENSLLEG00000028003 ENSLLEG00000028013 ENSLLEG00000028070 #22 ENSLLEG00000028103 #22 ENSLLEG00000028166 #22 ENSLLEG00000028459 #22 ENSLLEG00000028494 #22 ENSLLEG00000028611 #22 ENSLLEG00000028654 #22 ENSLLEG00000028707 #22 ENSLLEG00000028813 ENSLLEG00000028826 #22 ENSLLEG00000028876 #29 ENSLLEG00000029215 SMARCE1 (ENSLLEG00000029236) #31 ENSLLEG00000029469 CCR7 (ENSLLEG00000029475) #32 ENSLLEG00000029481 TNS4 (ENSLLEG00000029493) #33 IGFBP4 (ENSLLEG00000029557) ENSLLEG00000029595 ENSLLEG00000029602 ENSLLEG00000029623 ENSLLEG00000029646 ENSLLEG00000021318 ENSLLEG00000021336 TOP2A (ENSLLEG00000021404) #34