Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000159486	ENSGT00940000163931	ENSGT00940000154448.b.b.b.a.a	ENSGT00940000163975	ENSGT00940000162736	ENSGT00940000155433	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b	ENSGT00940000164415	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT01100000265611	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000162736	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Tree shrew	MODERN SPECIES	4713															KRT20 (ENSTBEG00000016636) #21	KRT12 (ENSTBEG00000016553) #22
Glires	ANCESTRAL SPECIES	3	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000159486.e.a	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000162736	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000163931	ENSGT00940000154448.b.b.b.b.e.a	ENSGT00940000159486.e.a	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000162736	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000159486.f	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Kangaroo rat	MODERN SPECIES	326	ENSDORG00000026358	ENSDORG00000023366	ENSDORG00000008477	ENSDORG00000023721	ENSDORG00000012266	ENSDORG00000024033	ENSDORG00000028606	ENSDORG00000016176	ENSDORG00000025402	ENSDORG00000024187	ENSDORG00000023985	Krt40 (ENSDORG00000016181)	Krt39 (ENSDORG00000008898)	Krt23 (ENSDORG00000001625)	Krt20 (ENSDORG00000001623) #21	ENSDORG00000001618 #22	Krt10 (ENSDORG00000006753)	Krt28 (ENSDORG00000006752)	Krt27 (ENSDORG00000006751)	Krt26 (ENSDORG00000006750)	Krt25 (ENSDORG00000006749)	Krt24 (ENSDORG00000016005)	Krt222 (ENSDORG00000016002)	Smarce1 (ENSDORG00000015999)	Ccr7 (ENSDORG00000014123)	Tns4 (ENSDORG00000016056)	Igfbp4 (ENSDORG00000016055)	Top2a (ENSDORG00000016054)	Rara (ENSDORG00000023922)	Cdc6 (ENSDORG00000015184)	ENSDORG00000026557
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000164263	ENSGT00940000153980.j.a.a	ENSGT00940000153980.j.a.b.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000159486.f	ENSGT00940000155433	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Muroidea	ANCESTRAL SPECIES		ENSGT00940000159486.f.f	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000159486.f.e.a.a.a	ENSGT00940000155433	ENSGT00940000160295.ib.a	ENSGT00940000160295.ib.b.b.a.a	ENSGT00940000160295.ib.b.a	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000159486.f.f.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295.ib.a	ENSGT00940000160295.ib.b.a	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000154403.a.b	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000153980.j.a.b.a.b	ENSGT00940000163426	ENSGT00940000153980.j.a.a	ENSGT00940000160295.ib.a	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000153980.j.a.b.a.a.b	ENSGT00940000163658	ENSGT00940000159486.f.e.a.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295.ib.b.b.a.b	ENSGT00940000160295.ib.b.b.a.a	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Northern American deer mouse	MODERN SPECIES	21	Gm11555 (ENSPEMG00000028694)	ENSPEMG00000027729	ENSPEMG00000028223	ENSPEMG00000024614	ENSPEMG00000030371	ENSPEMG00000025752	Krtap1-5 (ENSPEMG00000014953)	Krtap3-1 (ENSPEMG00000014982)	Gm11939 (ENSPEMG00000025106)	ENSPEMG00000027732	ENSPEMG00000030050	Krt40 (ENSPEMG00000011683)	Krt39 (ENSPEMG00000013051)	Krt23 (ENSPEMG00000010375)	Krt20 (ENSPEMG00000008907) #21	Krt12 (ENSPEMG00000012317) #22	Krt10 (ENSPEMG00000016211)	Krt28 (ENSPEMG00000017906)	Krt27 (ENSPEMG00000002310)	Krt26 (ENSPEMG00000012535)	Krt25 (ENSPEMG00000016149)	Krt24 (ENSPEMG00000017697)	Krt222 (ENSPEMG00000011259)	Smarce1 (ENSPEMG00000018043)	Ccr7 (ENSPEMG00000009706)	Tns4 (ENSPEMG00000020329)	Igfbp4 (ENSPEMG00000014210)	Top2a (ENSPEMG00000016393)	Gjd3 (ENSPEMG00000014917)	Rara (ENSPEMG00000010534)	Cdc6 (ENSPEMG00000012427)
Prairie vole	MODERN SPECIES	114	Gm11563 (ENSMOCG00000017454)	ENSMOCG00000009228	ENSMOCG00000005151	ENSMOCG00000005136	ENSMOCG00000005678	ENSMOCG00000010132	ENSMOCG00000003960	Krtap1-5 (ENSMOCG00000012540)	Krtap3-1 (ENSMOCG00000020675)	ENSMOCG00000005111	ENSMOCG00000002845	Krt40 (ENSMOCG00000016435)	Krt39 (ENSMOCG00000018914)	Krt23 (ENSMOCG00000014828)	Krt20 (ENSMOCG00000002735) #21	Krt12 (ENSMOCG00000001503) #22	Krt10 (ENSMOCG00000009134)	Krt28 (ENSMOCG00000007496)	Krt27 (ENSMOCG00000005020)	Krt26 (ENSMOCG00000014953)	Krt25 (ENSMOCG00000020569)	Krt24 (ENSMOCG00000017266)	Krt222 (ENSMOCG00000021148)	ENSMOCG00000015059	Ccr7 (ENSMOCG00000004292)	Tns4 (ENSMOCG00000022959)	Igfbp4 (ENSMOCG00000021157)	Top2a (ENSMOCG00000013182)	Gjd3 (ENSMOCG00000005264)	Rara (ENSMOCG00000016096)	Cdc6 (ENSMOCG00000021152)
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000163658	ENSGT00940000164459	ENSGT00840000130699	ENSGT00940000159486.f.f.a.b	ENSGT00940000163416	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295.ib.b.b.a.b	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Golden Hamster	MODERN SPECIES	674					ENSMAUG00000021591	ENSMAUG00000014874	ENSMAUG00000016423	ENSMAUG00000010652	Krtap1-3 (ENSMAUG00000013235)	Krtap3-1 (ENSMAUG00000010133)	ENSMAUG00000010087	Krt40 (ENSMAUG00000019288)	Krt39 (ENSMAUG00000011575)	Krt23 (ENSMAUG00000015956)	Krt20 (ENSMAUG00000012821) #21	Krt12 (ENSMAUG00000021614) #22	Krt10 (ENSMAUG00000022010)	Krt28 (ENSMAUG00000016117)	Krt27 (ENSMAUG00000010781)	Krt26 (ENSMAUG00000009507)	Krt25 (ENSMAUG00000016144)	Krt24 (ENSMAUG00000000934)	Krt222 (ENSMAUG00000009280)	Smarce1 (ENSMAUG00000006265)	Ccr7 (ENSMAUG00000021249)	Tns4 (ENSMAUG00000016240)	Igfbp4 (ENSMAUG00000008494)	Top2a (ENSMAUG00000010103)	Rara (ENSMAUG00000014473)	Cdc6 (ENSMAUG00000004369)	Wipf2 (ENSMAUG00000002857)
Chinese hamster chok1gshd	MODERN SPECIES	33	ENSCGRG00001012466	ENSCGRG00001024559	ENSCGRG00001003344	ENSCGRG00001012468	ENSCGRG00001021738	ENSCGRG00001009734	Krtap9-3 (ENSCGRG00001007897)	Krtap3-1 (ENSCGRG00001004619)	Gm11939 (ENSCGRG00001005088)	ENSCGRG00001006304	ENSCGRG00001012848	Krt40 (ENSCGRG00001000083)	Krt39 (ENSCGRG00001019993)	Krt23 (ENSCGRG00001000115)	Krt20 (ENSCGRG00001022236) #21	Krt12 (ENSCGRG00001000815) #22	Krt10 (ENSCGRG00001006589)	Krt28 (ENSCGRG00001010998)	Krt27 (ENSCGRG00001020156)	Krt26 (ENSCGRG00001023067)	Krt25 (ENSCGRG00001019023)	Krt24 (ENSCGRG00001016600)	Krt222 (ENSCGRG00001001412)	Smarce1 (ENSCGRG00001010211)	Ccr7 (ENSCGRG00001022917)	Tns4 (ENSCGRG00001016573)	Igfbp4 (ENSCGRG00001002713)	Top2a (ENSCGRG00001020913)	Gjd3 (ENSCGRG00001008548)	Rara (ENSCGRG00001021724)	CDC6 (ENSCGRG00001023158)
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000164263	ENSGT00940000159486.f.f.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295.ib.a	ENSGT00940000160295.ib.b.b.b	ENSGT00940000160295.ib.b.a	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Mus	ANCESTRAL SPECIES	2	ENSGT00940000159486.f.e.b	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433.fb.b	ENSGT00940000155433.fb.a	ENSGT00940000160295.ib.a	ENSGT00940000160295.ib.b.b.b	ENSGT00940000160295.ib.b.a	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000159486.f.e.a.a.a	ENSGT00940000155433.fb.b.a	ENSGT00940000155433.fb.a	ENSGT00940000155433.fb.b.b	ENSGT00940000160295.ib.a	ENSGT00940000160295.ib.b.b.b	ENSGT00940000160295.ib.b.a	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000163416	ENSGT00840000130699.b	ENSGT00840000130699.a.b	ENSGT00940000155433.fb.b.b	ENSGT00940000160295.ib.a	ENSGT00940000160295.ib.b.b.b	ENSGT00940000160295.ib.b.a	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Mouse	MODERN SPECIES	2	Krtap2-4 (ENSMUSG00000060756)	Gm11937 (ENSMUSG00000058725)	Gm11938 (ENSMUSG00000057674)	Krtap9-3 (ENSMUSG00000049809)	Krtap1-3 (ENSMUSG00000078131)	Krtap1-4 (ENSMUSG00000075567)	Krtap1-5 (ENSMUSG00000047253)	Krtap3-1 (ENSMUSG00000047564)	Gm11939 (ENSMUSG00000078132)	Krtap3-2 (ENSMUSG00000069721)	Krtap3-3 (ENSMUSG00000069722)	Krt40 (ENSMUSG00000059169)	Krt39 (ENSMUSG00000064165)	Krt23 (ENSMUSG00000006777)	Krt20 (ENSMUSG00000035775) #21	Krt12 (ENSMUSG00000020912) #22	Krt10 (ENSMUSG00000019761)	Krt28 (ENSMUSG00000055937)	Krt27 (ENSMUSG00000017588)	Krt26 (ENSMUSG00000075570)	Krt25 (ENSMUSG00000035831)	Krt24 (ENSMUSG00000020913)	Krt222 (ENSMUSG00000035849)	Smarce1 (ENSMUSG00000037935)	Ccr7 (ENSMUSG00000037944)	Tns4 (ENSMUSG00000017607)	Igfbp4 (ENSMUSG00000017493)	Top2a (ENSMUSG00000020914)	Gjd3 (ENSMUSG00000047197)	Rara (ENSMUSG00000037992)	Cdc6 (ENSMUSG00000017499)
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000159486.f.f.b.a	ENSGT00940000154448.b.b.a.b.b.a	ENSGT00940000154448.b.b.a.a.b	ENSGT00940000155433.fb.a	ENSGT00940000160295.ib.a	ENSGT00940000160295.ib.b.b.b	ENSGT00940000160295.ib.b.a	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Steppe mouse	MODERN SPECIES	2890	ENSMSIG00000025810	ENSMSIG00000025818	ENSMSIG00000025826	Krtap2-4 (ENSMSIG00000025829)	Krtap9-3 (ENSMSIG00000025835)	Krtap1-3 (ENSMSIG00000025841)	Krtap1-4 (ENSMSIG00000025846)	Krtap1-5 (ENSMSIG00000025851)	Krtap3-1 (ENSMSIG00000025854)	Gm11939 (ENSMSIG00000025860)	ENSMSIG00000025863	Krt40 (ENSMSIG00000025867)	Krt39 (ENSMSIG00000025878)	Krt23 (ENSMSIG00000025887)	Krt20 (ENSMSIG00000025894) #21	Krt12 (ENSMSIG00000025906) #22	Krt10 (ENSMSIG00000025917)	Krt28 (ENSMSIG00000025924)	Krt27 (ENSMSIG00000025937)	Krt26 (ENSMSIG00000025947)	Krt25 (ENSMSIG00000025951)	Krt24 (ENSMSIG00000025961)	Krt222 (ENSMSIG00000025974)	ENSMSIG00000025987	ENSMSIG00000026011	Ccr7 (ENSMSIG00000026032)	Tns4 (ENSMSIG00000026039)	Igfbp4 (ENSMSIG00000026061)	Top2a (ENSMSIG00000026083)	Gjd3 (ENSMSIG00000026168)	Rara (ENSMSIG00000026176)
spretus	MODERN SPECIES	2	MGP_SPRETEiJ_G0017976	MGP_SPRETEiJ_G0017975	MGP_SPRETEiJ_G0017974	Krtap9-3 (MGP_SPRETEiJ_G0017973)	Krtap1-3 (MGP_SPRETEiJ_G0017972)	Krtap1-4 (MGP_SPRETEiJ_G0017971)	Krtap1-5 (MGP_SPRETEiJ_G0017970)	Krtap3-1 (MGP_SPRETEiJ_G0017969)	Gm11939 (MGP_SPRETEiJ_G0017968)	MGP_SPRETEiJ_G0017967	MGP_SPRETEiJ_G0017966	Krt40 (MGP_SPRETEiJ_G0017965)	Krt39 (MGP_SPRETEiJ_G0017964)	Krt23 (MGP_SPRETEiJ_G0017963)	Krt20 (MGP_SPRETEiJ_G0017962) #21	Krt12 (MGP_SPRETEiJ_G0017961) #22	Krt10 (MGP_SPRETEiJ_G0017960)	Krt28 (MGP_SPRETEiJ_G0017959)	Krt27 (MGP_SPRETEiJ_G0017958)	Krt26 (MGP_SPRETEiJ_G0017957)	Krt25 (MGP_SPRETEiJ_G0017956)	Krt24 (MGP_SPRETEiJ_G0017955)	Krt222 (MGP_SPRETEiJ_G0017954)	Smarce1 (MGP_SPRETEiJ_G0017953)	Ccr7 (MGP_SPRETEiJ_G0017952)	Tns4 (MGP_SPRETEiJ_G0017951)	Igfbp4 (MGP_SPRETEiJ_G0017950)	Top2a (MGP_SPRETEiJ_G0017949)	Gjd3 (MGP_SPRETEiJ_G0017948)	Rara (MGP_SPRETEiJ_G0017947)	Cdc6 (MGP_SPRETEiJ_G0017946)
Ryukyu mouse	MODERN SPECIES	2	MGP_CAROLIEiJ_G0017132	MGP_CAROLIEiJ_G0017131	Gm11938 (MGP_CAROLIEiJ_G0017130)	Krtap9-3 (MGP_CAROLIEiJ_G0017129)	Krtap1-3 (MGP_CAROLIEiJ_G0017128)	Krtap1-4 (MGP_CAROLIEiJ_G0017127)	Krtap1-5 (MGP_CAROLIEiJ_G0017126)	Krtap3-1 (MGP_CAROLIEiJ_G0017125)	Gm11939 (MGP_CAROLIEiJ_G0017124)	MGP_CAROLIEiJ_G0017123	MGP_CAROLIEiJ_G0017122	Krt40 (MGP_CAROLIEiJ_G0017121)	Krt39 (MGP_CAROLIEiJ_G0017120)	Krt23 (MGP_CAROLIEiJ_G0017119)	Krt20 (MGP_CAROLIEiJ_G0017118) #21	Krt12 (MGP_CAROLIEiJ_G0017117) #22	Krt10 (MGP_CAROLIEiJ_G0017116)	Krt28 (MGP_CAROLIEiJ_G0017115)	Krt27 (MGP_CAROLIEiJ_G0017114)	Krt26 (MGP_CAROLIEiJ_G0017113)	Krt25 (MGP_CAROLIEiJ_G0017112)	Krt24 (MGP_CAROLIEiJ_G0017111)	Krt222 (MGP_CAROLIEiJ_G0017110)	Smarce1 (MGP_CAROLIEiJ_G0017109)	Ccr7 (MGP_CAROLIEiJ_G0017108)	Tns4 (MGP_CAROLIEiJ_G0017107)	Igfbp4 (MGP_CAROLIEiJ_G0017106)	Top2a (MGP_CAROLIEiJ_G0017105)	Gjd3 (MGP_CAROLIEiJ_G0017104)	Rara (MGP_CAROLIEiJ_G0017103)	Cdc6 (MGP_CAROLIEiJ_G0017102)
Shrew mouse	MODERN SPECIES	5	MGP_PahariEiJ_G0018261	MGP_PahariEiJ_G0018260	MGP_PahariEiJ_G0018259	Krtap9-3 (MGP_PahariEiJ_G0018258)	MGP_PahariEiJ_G0018257	Krtap1-4 (MGP_PahariEiJ_G0018256)	Krtap1-5 (MGP_PahariEiJ_G0018255)	Krtap3-1 (MGP_PahariEiJ_G0018254)	Gm11939 (MGP_PahariEiJ_G0018253)	MGP_PahariEiJ_G0018252	MGP_PahariEiJ_G0018251	Krt40 (MGP_PahariEiJ_G0018250)	Krt39 (MGP_PahariEiJ_G0018249)	Krt23 (MGP_PahariEiJ_G0018248)	Krt20 (MGP_PahariEiJ_G0018247) #21	Krt12 (MGP_PahariEiJ_G0018246) #22	Krt10 (MGP_PahariEiJ_G0018245)	MGP_PahariEiJ_G0018244	Krt27 (MGP_PahariEiJ_G0018243)	Krt26 (MGP_PahariEiJ_G0018242)	Krt25 (MGP_PahariEiJ_G0018241)	Krt24 (MGP_PahariEiJ_G0018240)	Krt222 (MGP_PahariEiJ_G0018239)	Smarce1 (MGP_PahariEiJ_G0018238)	Ccr7 (MGP_PahariEiJ_G0018237)	Tns4 (MGP_PahariEiJ_G0018236)	MGP_PahariEiJ_G0018235	Top2a (MGP_PahariEiJ_G0018234)	Gjd3 (MGP_PahariEiJ_G0018233)	Rara (MGP_PahariEiJ_G0018232)	Cdc6 (MGP_PahariEiJ_G0018231)
Rat	MODERN SPECIES	1	Krtap2-4l (ENSRNOG00000060847)	Krtap2-1 (ENSRNOG00000065269)	RGD1561684 (ENSRNOG00000063772)	LOC100365588 (ENSRNOG00000053283)	Krtap1-3 (ENSRNOG00000052388)	Krtap1-1 (ENSRNOG00000012955)	Krtap1-5 (ENSRNOG00000054186)	Krtap3-1 (ENSRNOG00000012544)	LOC120095334 (ENSRNOG00000060205)	Krtap3-2 (ENSRNOG00000049383)	Krtap3-3 (ENSRNOG00000045678)	Krt40 (ENSRNOG00000013896)	Krt39 (ENSRNOG00000031422)	Krt23 (ENSRNOG00000011907)	Krt20 (ENSRNOG00000027139) #21	Krt12 (ENSRNOG00000011986) #22	Krt10 (ENSRNOG00000030170)	Krt28 (ENSRNOG00000011846)	Krt27 (ENSRNOG00000011628)	Krt26 (ENSRNOG00000033617)	Krt25 (ENSRNOG00000011196)	Krt24 (ENSRNOG00000010970)	Krt222 (ENSRNOG00000010839)	Smarce1 (ENSRNOG00000010676)	Ccr7 (ENSRNOG00000010665)	Tns4 (ENSRNOG00000027350)	Igfbp4 (ENSRNOG00000010635)	Top2a (ENSRNOG00000053047)	Gjd3 (ENSRNOG00000051691)	Rara (ENSRNOG00000009972)	Cdc6 (ENSRNOG00000027787)
Upper Galilee mountains blind mole rat	MODERN SPECIES	912	ENSNGAG00000014947	ENSNGAG00000015529	ENSNGAG00000015518	ENSNGAG00000016313	ENSNGAG00000015404	ENSNGAG00000011138	Krtap1-4 (ENSNGAG00000014313)	Krtap1-5 (ENSNGAG00000013189)	Krtap3-1 (ENSNGAG00000014967)	ENSNGAG00000014681	ENSNGAG00000015155	Krt40 (ENSNGAG00000002573)	Krt39 (ENSNGAG00000017057)	Krt23 (ENSNGAG00000003686)	Krt20 (ENSNGAG00000012272) #21	Krt12 (ENSNGAG00000017518) #22	Krt10 (ENSNGAG00000017006)	Krt28 (ENSNGAG00000020295)	Krt27 (ENSNGAG00000019608)	Krt26 (ENSNGAG00000010579)	Krt25 (ENSNGAG00000000113)	Krt24 (ENSNGAG00000017103)	Krt222 (ENSNGAG00000014550)	ENSNGAG00000015419	Ccr7 (ENSNGAG00000010036)
Lesser Egyptian jerboa	MODERN SPECIES	56	ENSJJAG00000022802	ENSJJAG00000021359	ENSJJAG00000021927	ENSJJAG00000022794	ENSJJAG00000006288	ENSJJAG00000005972	ENSJJAG00000022051	ENSJJAG00000006226	Krtap3-1 (ENSJJAG00000006011)	ENSJJAG00000006371	ENSJJAG00000006041	Krt40 (ENSJJAG00000022059)	Krt39 (ENSJJAG00000021955)	Krt23 (ENSJJAG00000022215)	Krt20 (ENSJJAG00000022728) #21	Krt12 (ENSJJAG00000021975) #22	Krt10 (ENSJJAG00000022778)	Krt28 (ENSJJAG00000022837)	Krt27 (ENSJJAG00000023044)	Krt26 (ENSJJAG00000009739)	Krt25 (ENSJJAG00000023627)	Krt24 (ENSJJAG00000023143)	Krt222 (ENSJJAG00000021966)	Smarce1 (ENSJJAG00000023161)	Ccr7 (ENSJJAG00000002196)	Tns4 (ENSJJAG00000003969)	Igfbp4 (ENSJJAG00000000680)	Top2a (ENSJJAG00000007045)	Gjd3 (ENSJJAG00000009539)	Rara (ENSJJAG00000001668)	Cdc6 (ENSJJAG00000022817)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000163931	ENSGT00940000154448.b.b.b.b.e.a	ENSGT00940000159486.e.a	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000162736	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000163658	ENSGT00940000164459	ENSGT00940000156135	ENSGT00940000163931	ENSGT00940000155433	ENSGT00940000162736	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005002182	ENSSVLG00005002196	ENSSVLG00005002212	ENSSVLG00005002228	ENSSVLG00005002240	ENSSVLG00005002256	KRTAP3-1 (ENSSVLG00005002274)	ENSSVLG00005002286	ENSSVLG00005002295	ENSSVLG00005002312	KRT40 (ENSSVLG00005002328)	KRT39 (ENSSVLG00005002361)	KRT23 (ENSSVLG00005002405)	KRT20 (ENSSVLG00005002465) #21	ENSSVLG00005002497 #22	ENSSVLG00005002521 #22	KRT10 (ENSSVLG00005002550)	KRT28 (ENSSVLG00005002575)	KRT27 (ENSSVLG00005002600)	KRT26 (ENSSVLG00005002624)	KRT25 (ENSSVLG00005002659)	KRT24 (ENSSVLG00005002690)	ENSSVLG00005002717	ENSSVLG00005002734	KRT222 (ENSSVLG00005002764)	SMARCE1 (ENSSVLG00005002799)	CCR7 (ENSSVLG00005002834)	TNS4 (ENSSVLG00005002865)	IGFBP4 (ENSSVLG00005002915)	TOP2A (ENSSVLG00005002957)	GJD3 (ENSSVLG00005002978)
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005002159	ENSSVLG00005002182	ENSSVLG00005002196	ENSSVLG00005002212	ENSSVLG00005002228	ENSSVLG00005002240	ENSSVLG00005002256	KRTAP3-1 (ENSSVLG00005002274)	ENSSVLG00005002286	ENSSVLG00005002295	ENSSVLG00005002312	KRT40 (ENSSVLG00005002328)	KRT39 (ENSSVLG00005002361)	KRT23 (ENSSVLG00005002405)	KRT20 (ENSSVLG00005002465) #21	ENSSVLG00005002497 #22	ENSSVLG00005002521 #22	KRT10 (ENSSVLG00005002550)	KRT28 (ENSSVLG00005002575)	KRT27 (ENSSVLG00005002600)	KRT26 (ENSSVLG00005002624)	KRT25 (ENSSVLG00005002659)	KRT24 (ENSSVLG00005002690)	ENSSVLG00005002717	ENSSVLG00005002734	KRT222 (ENSSVLG00005002764)	SMARCE1 (ENSSVLG00005002799)	CCR7 (ENSSVLG00005002834)	TNS4 (ENSSVLG00005002865)	IGFBP4 (ENSSVLG00005002915)	TOP2A (ENSSVLG00005002957)
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000161991	ENSGT00940000153980.j.a.b.b.c.a	ENSGT00940000163426	ENSGT00940000153980.j.a.b.b.c.b	ENSGT00940000153980.j.a.b.b.d	ENSGT00860000136155	ENSGT00940000163658	ENSGT00940000164459	ENSGT00390000001157.B	ENSGT00390000001157.C.gc.b	ENSGT00390000001157.C.gc.a	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000153980.j.a.b.b.c.a	ENSGT00940000153980.j.a.a	ENSGT00940000153980.j.a.b.b.c.b	ENSGT00940000153980.j.a.b.b.d	ENSGT00940000163416	ENSGT00940000155433	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.B	ENSGT00390000001157.C.gc.b	ENSGT00390000001157.C.gc.a	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Arctic ground squirrel	MODERN SPECIES	46	KRTAP16-1 (ENSUPAG00010008810)	KRTAP29-1 (ENSUPAG00010008797)	ENSUPAG00010008769	ENSUPAG00010008754	ENSUPAG00010008750	ENSUPAG00010008626	ENSUPAG00010008623	ENSUPAG00010008620	ENSUPAG00010008616	ENSUPAG00010008611	ENSUPAG00010008604	KRT40 (ENSUPAG00010008559)	KRT39 (ENSUPAG00010008539)	KRT23 (ENSUPAG00010008531)	KRT20 (ENSUPAG00010008517) #21	KRT12 (ENSUPAG00010008495) #22	KRT10 (ENSUPAG00010008483)	KRT28 (ENSUPAG00010008467)	KRT27 (ENSUPAG00010008459)	KRT26 (ENSUPAG00010008447)	KRT25 (ENSUPAG00010008441)	KRT24 (ENSUPAG00010008434)	KRT222 (ENSUPAG00010008427)	SMARCE1 (ENSUPAG00010008422)	CCR7 (ENSUPAG00010008418)	TNS4 (ENSUPAG00010008407)	IGFBP4 (ENSUPAG00010008401)	TOP2A (ENSUPAG00010008363)	RARA (ENSUPAG00010008330)	CDC6 (ENSUPAG00010008314)	WIPF2 (ENSUPAG00010008280)
Squirrel	MODERN SPECIES	90	ENSSTOG00000013195	ENSSTOG00000031988	ENSSTOG00000032994	ENSSTOG00000033084	ENSSTOG00000027734	ENSSTOG00000023947	ENSSTOG00000029114	ENSSTOG00000021731	ENSSTOG00000012673	ENSSTOG00000012507	ENSSTOG00000027131	ENSSTOG00000025033	ENSSTOG00000019917	KRT39 (ENSSTOG00000013190)	KRT23 (ENSSTOG00000013795)	KRT12 (ENSSTOG00000013295) #22	KRT10 (ENSSTOG00000002204)	KRT28 (ENSSTOG00000032131)	KRT27 (ENSSTOG00000002187)	KRT26 (ENSSTOG00000034065)	KRT25 (ENSSTOG00000002183)	KRT24 (ENSSTOG00000002178)	KRT222 (ENSSTOG00000029003)	SMARCE1 (ENSSTOG00000002175)	CCR7 (ENSSTOG00000001864)	TNS4 (ENSSTOG00000004876)	IGFBP4 (ENSSTOG00000029166)	TOP2A (ENSSTOG00000004794)	GJD3 (ENSSTOG00000019754)	RARA (ENSSTOG00000004746)	CDC6 (ENSSTOG00000004716)
Alpin marmot	MODERN SPECIES	42	ENSMMMG00000006802	ENSMMMG00000007015	KRTAP16-1 (ENSMMMG00000007017)	ENSMMMG00000007037	ENSMMMG00000007061	ENSMMMG00000007085	ENSMMMG00000007146	ENSMMMG00000007150	ENSMMMG00000007156	ENSMMMG00000007160	ENSMMMG00000007167	KRT40 (ENSMMMG00000007173)	KRT39 (ENSMMMG00000007199)	KRT23 (ENSMMMG00000007227)	KRT20 (ENSMMMG00000007239) #21	KRT12 (ENSMMMG00000007259) #22	KRT10 (ENSMMMG00000007279)	KRT28 (ENSMMMG00000007288)	KRT27 (ENSMMMG00000007294)	KRT26 (ENSMMMG00000007307)	KRT25 (ENSMMMG00000007316)	KRT24 (ENSMMMG00000007326)	KRT222 (ENSMMMG00000007351)	SMARCE1 (ENSMMMG00000007365)	CCR7 (ENSMMMG00000007384)	TNS4 (ENSMMMG00000007390)	IGFBP4 (ENSMMMG00000007401)	TOP2A (ENSMMMG00000007405)	RARA (ENSMMMG00000007451)	CDC6 (ENSMMMG00000007492)	WIPF2 (ENSMMMG00000007511)
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000159486.f	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00390000018397	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000153980.j.a.a	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000163931	ENSGT00940000159486.e.a	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00390000018397	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000153980.j.a.a	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000163931	ENSGT00940000159486.e.a	ENSGT00940000154448.b.b.b.b.f	ENSGT00940000155433	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00390000018397	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Long-tailed chinchilla	MODERN SPECIES	158	ENSCLAG00000015082	ENSCLAG00000017906	ENSCLAG00000015077	ENSCLAG00000015152	ENSCLAG00000018011	ENSCLAG00000013798	ENSCLAG00000018055	ENSCLAG00000015264	ENSCLAG00000017986	ENSCLAG00000018003	KRTAP3-1 (ENSCLAG00000017980)	ENSCLAG00000017863	KRT40 (ENSCLAG00000014940)	KRT39 (ENSCLAG00000013824)	KRT23 (ENSCLAG00000014628)	KRT12 (ENSCLAG00000015867) #22	KRT10 (ENSCLAG00000017300)	KRT26 (ENSCLAG00000016281)	KRT28 (ENSCLAG00000015353)	KRT24 (ENSCLAG00000015192)	KRT222 (ENSCLAG00000016700)	SMARCE1 (ENSCLAG00000015303)	CCR7 (ENSCLAG00000016277)	TNS4 (ENSCLAG00000013766)	IGFBP4 (ENSCLAG00000015611)	ENSCLAG00000016494	TOP2A (ENSCLAG00000014772)	RARA (ENSCLAG00000016604)	CDC6 (ENSCLAG00000015306)	WIPF2 (ENSCLAG00000015019)	RAPGEFL1 (ENSCLAG00000013660)
Degu	MODERN SPECIES	97	KRTAP16-1 (ENSODEG00000017880)	ENSODEG00000017810	ENSODEG00000017804	ENSODEG00000017801	ENSODEG00000017790	ENSODEG00000017966	ENSODEG00000017878	ENSODEG00000020458	ENSODEG00000017796	KRTAP3-1 (ENSODEG00000020553)	ENSODEG00000020535	ENSODEG00000020505	KRT40 (ENSODEG00000017770)	KRT39 (ENSODEG00000017870)	KRT23 (ENSODEG00000017766)	KRT12 (ENSODEG00000017798) #22	KRT10 (ENSODEG00000018133)	KRT28 (ENSODEG00000017869)	KRT27 (ENSODEG00000017814)	KRT26 (ENSODEG00000017748)	KRT25 (ENSODEG00000017866)	KRT24 (ENSODEG00000017754)	KRT222 (ENSODEG00000017765)	ENSODEG00000017812	CCR7 (ENSODEG00000017849)	TNS4 (ENSODEG00000017791)	IGFBP4 (ENSODEG00000017749)	RDM1 (ENSODEG00000017788)	TOP2A (ENSODEG00000018034)	GJD3 (ENSODEG00000017680)	RARA (ENSODEG00000017623)
Guinea pig	MODERN SPECIES	53	ENSCPOG00000039942	ENSCPOG00000031771	ENSCPOG00000040575	ENSCPOG00000037983	ENSCPOG00000030187	ENSCPOG00000034760	ENSCPOG00000031237	ENSCPOG00000038991	ENSCPOG00000009368	KRTAP3-1 (ENSCPOG00000011046)	ENSCPOG00000038722	ENSCPOG00000011044	KRT40 (ENSCPOG00000011037)	KRT39 (ENSCPOG00000011033)	KRT23 (ENSCPOG00000011030)	ENSCPOG00000034129 #22	ENSCPOG00000033395	ENSCPOG00000036632	KRT28 (ENSCPOG00000033049)	KRT27 (ENSCPOG00000030964)	KRT26 (ENSCPOG00000038591)	KRT25 (ENSCPOG00000000495)	KRT24 (ENSCPOG00000032839)	KRT222 (ENSCPOG00000023380)	SMARCE1 (ENSCPOG00000000173)	CCR7 (ENSCPOG00000031024)	TNS4 (ENSCPOG00000010254)	IGFBP4 (ENSCPOG00000008055)	ENSCPOG00000001495	TOP2A (ENSCPOG00000006799)	GJD3 (ENSCPOG00000039750)
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000033664	ENSHGLG00000011418	ENSHGLG00000046541	ENSHGLG00000048443	ENSHGLG00000016152	ENSHGLG00000036467	ENSHGLG00000045568	ENSHGLG00000020641	KRTAP3-1 (ENSHGLG00000020885)	ENSHGLG00000044225	ENSHGLG00000049120	ENSHGLG00000032503	KRT40 (ENSHGLG00000014814)	KRT39 (ENSHGLG00000009907)	KRT23 (ENSHGLG00000012804)	KRT12 (ENSHGLG00000014783) #22	KRT10 (ENSHGLG00000010577)	KRT28 (ENSHGLG00000012817)	KRT26 (ENSHGLG00000018049)	KRT25 (ENSHGLG00000016382)	KRT24 (ENSHGLG00000016476)	KRT222 (ENSHGLG00000014433)	SMARCE1 (ENSHGLG00000014523)	ENSHGLG00000031415	CCR7 (ENSHGLG00000009998)	TNS4 (ENSHGLG00000011575)	IGFBP4 (ENSHGLG00000009899)	ENSHGLG00000011280	TOP2A (ENSHGLG00000012875)	GJD3 (ENSHGLG00000014304)	RARA (ENSHGLG00000038969)
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000163931	ENSGT00940000159486.f	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b.e.b.b	ENSGT00940000159486.e.a	ENSGT00940000155433	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.B	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Rabbit	MODERN SPECIES	10	ENSOCUG00000036372	ENSOCUG00000021896	ENSOCUG00000031432	ENSOCUG00000030603	ENSOCUG00000032281	ENSOCUG00000036283	ENSOCUG00000008528	ENSOCUG00000029827	KRTAP3-1 (ENSOCUG00000015615)	ENSOCUG00000031203	ENSOCUG00000024778	ENSOCUG00000024352	KRT40 (ENSOCUG00000015603)	KRT39 (ENSOCUG00000015593)	KRT23 (ENSOCUG00000017694)	KRT12 (ENSOCUG00000017689) #22	KRT28 (ENSOCUG00000015132)	KRT10 (ENSOCUG00000011731)	KRT26 (ENSOCUG00000008999)	KRT25 (ENSOCUG00000008992)	KRT222 (ENSOCUG00000027447)	SMARCE1 (ENSOCUG00000008981)	CCR7 (ENSOCUG00000025569)	TNS4 (ENSOCUG00000002830)	IGFBP4 (ENSOCUG00000002828)	TOP2A (ENSOCUG00000002814)	GJD3 (ENSOCUG00000004916)	RARA (ENSOCUG00000004903)	CDC6 (ENSOCUG00000004898)	ENSOCUG00000029564	RAPGEFL1 (ENSOCUG00000023409)
Pika	MODERN SPECIES	4691														KRT23 (ENSOPRG00000009842)	KRT20 (ENSOPRG00000009828) #21	KRT12 (ENSOPRG00000009810) #22	ENSOPRG00000009788	ENSOPRG00000018471	KRT27 (ENSOPRG00000009774)	KRT26 (ENSOPRG00000009761)	KRT25 (ENSOPRG00000009745)	KRT24 (ENSOPRG00000009728)	KRT222 (ENSOPRG00000018441)
Primates	ANCESTRAL SPECIES	3	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163931	ENSGT00940000163975	ENSGT00940000162736	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT00940000164415	ENSGT00390000003628.b.c.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000156135	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163931	ENSGT00940000163975	ENSGT00940000162736	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT00940000164415	ENSGT00390000003628.b.c.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000156135.h	ENSGT00940000164350.B	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000159486	ENSGT00940000163975	ENSGT00940000154448.b.b.b.b	ENSGT00940000162736	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d.p.b	ENSGT00940000164415	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000163975	ENSGT00940000165435	ENSGT00940000154448.b.b.b.b	ENSGT00940000164350.B	ENSGT00940000164350.A	ENSGT00940000165697	ENSGT00940000162736	ENSGT00940000160443.o	ENSGT00940000160443.p	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000164350.A	ENSGT00940000164350.B	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000162736	ENSGT00940000160443.o.a	ENSGT00940000160443.o.b.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000164350.B	ENSGT00940000154448.b.b.b.b	ENSGT00940000165435	ENSGT00940000163975.e.b	ENSGT00940000159486	ENSGT00940000162736	ENSGT00940000160443.o.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000163975.e.b	ENSGT00940000163975.e.a.b	ENSGT00940000163975.e.a.a	ENSGT00940000159486	ENSGT00940000162736.w.a	ENSGT00940000160443.o.a	ENSGT00940000160443.o.b.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b	ENSGT00390000001157.C.x	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Gorilla	MODERN SPECIES	18	ENSGGOG00000043973	ENSGGOG00000036943	ENSGGOG00000038087	ENSGGOG00000040059	ENSGGOG00000041957	KRTAP1-1 (ENSGGOG00000016411)	KRTAP1-3 (ENSGGOG00000008142)	ENSGGOG00000027718	KRTAP3-1 (ENSGGOG00000025337)	ENSGGOG00000043613	ENSGGOG00000038810	KRT40 (ENSGGOG00000006511)	KRT39 (ENSGGOG00000017063)	KRT23 (ENSGGOG00000025840)	KRT20 (ENSGGOG00000004278) #21	KRT12 (ENSGGOG00000004274) #22	ENSGGOG00000038478	KRT10 (ENSGGOG00000000457)	KRT28 (ENSGGOG00000009707)	KRT27 (ENSGGOG00000013291)	KRT26 (ENSGGOG00000011236)	KRT25 (ENSGGOG00000043356)	KRT24 (ENSGGOG00000009695)	KRT222 (ENSGGOG00000013714)	SMARCE1 (ENSGGOG00000011803)	CCR7 (ENSGGOG00000016340)	TNS4 (ENSGGOG00000009684)	IGFBP4 (ENSGGOG00000009883)	TOP2A (ENSGGOG00000012704)	GJD3 (ENSGGOG00000003119)	ENSGGOG00000003114
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000163975.e.a.b	ENSGT00940000163975.e.a.a	ENSGT00940000159486	ENSGT00940000162736.w.a	ENSGT00940000160443.o.a	ENSGT00940000160443.o.b.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b	ENSGT00390000001157.C.x	ENSGT00390000001157.C.w	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Human	MODERN SPECIES	8	KRTAP2-4 (ENSG00000213417)	KRTAP2-3 (ENSG00000212724)	KRTAP2-2 (ENSG00000214518)	KRTAP2-1 (ENSG00000212725)	KRTAP1-1 (ENSG00000188581)	KRTAP1-3 (ENSG00000221880)	KRTAP1-4 (ENSG00000204887)	KRTAP1-5 (ENSG00000221852)	KRTAP3-1 (ENSG00000212901)	KRTAP3-2 (ENSG00000212900)	KRTAP3-3 (ENSG00000212899)	KRT40 (ENSG00000204889)	KRT39 (ENSG00000196859)	KRT23 (ENSG00000108244)	KRT20 (ENSG00000171431) #21	KRT12 (ENSG00000187242) #22	KRT10 (ENSG00000186395)	KRT28 (ENSG00000173908)	KRT27 (ENSG00000171446)	KRT26 (ENSG00000186393)	KRT25 (ENSG00000204897)	KRT24 (ENSG00000167916)	KRT222 (ENSG00000213424)	SMARCE1 (ENSG00000073584)	CCR7 (ENSG00000126353)	TNS4 (ENSG00000131746)	IGFBP4 (ENSG00000141753)	TOP2A (ENSG00000131747)	GJD3 (ENSG00000183153)	RARA (ENSG00000131759)	CDC6 (ENSG00000094804)
Pan	ANCESTRAL SPECIES	3	ENSGT00940000165435	ENSGT00940000163975.e.b.b	ENSGT00940000163975.f	ENSGT00940000163975.e.b.a	ENSGT00940000162736.w.a	ENSGT00940000160443.o.a	ENSGT00940000160443.o.b.a	ENSGT00940000160443.p	ENSGT00940000160443.o.b.b	ENSGT00390000001157.A.b	ENSGT00390000001157.C.x	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Chimpanzee	MODERN SPECIES	8	KRTAP4-11 (ENSPTRG00000043038)	ENSPTRG00000009149	ENSPTRG00000042904	ENSPTRG00000030932	KRTAP1-1 (ENSPTRG00000042384)	KRTAP1-3 (ENSPTRG00000039138)	KRTAP1-4 (ENSPTRG00000043306)	KRTAP1-5 (ENSPTRG00000009145)	KRTAP3-1 (ENSPTRG00000009141)	ENSPTRG00000048871	ENSPTRG00000049793	KRT40 (ENSPTRG00000030928)	KRT39 (ENSPTRG00000023017)	KRT23 (ENSPTRG00000009137)	KRT20 (ENSPTRG00000009135) #21	KRT12 (ENSPTRG00000009134) #22	KRT10 (ENSPTRG00000009132)	KRT28 (ENSPTRG00000009131)	KRT27 (ENSPTRG00000009130)	KRT26 (ENSPTRG00000030927)	KRT25 (ENSPTRG00000009129)	KRT24 (ENSPTRG00000009128)	KRT222 (ENSPTRG00000034332)	SMARCE1 (ENSPTRG00000022902)	CCR7 (ENSPTRG00000009125)	TNS4 (ENSPTRG00000009124)	IGFBP4 (ENSPTRG00000009123)	TOP2A (ENSPTRG00000009122)	GJD3 (ENSPTRG00000009121)	RARA (ENSPTRG00000009120)	CDC6 (ENSPTRG00000009119)
Bonobo	MODERN SPECIES	8	ENSPPAG00000035558	ENSPPAG00000034671	ENSPPAG00000043333	ENSPPAG00000024926	ENSPPAG00000000910	ENSPPAG00000036449	KRTAP1-1 (ENSPPAG00000017831)	KRTAP1-4 (ENSPPAG00000021249)	KRTAP1-5 (ENSPPAG00000012582)	KRTAP3-1 (ENSPPAG00000018240)	ENSPPAG00000022850	KRT40 (ENSPPAG00000031205)	KRT39 (ENSPPAG00000041593)	KRT23 (ENSPPAG00000030794)	KRT20 (ENSPPAG00000031348) #21	KRT12 (ENSPPAG00000034686) #22	KRT10 (ENSPPAG00000039195)	KRT28 (ENSPPAG00000027727)	KRT27 (ENSPPAG00000038824)	KRT26 (ENSPPAG00000043196)	KRT25 (ENSPPAG00000030815)	ENSPPAG00000032199	KRT222 (ENSPPAG00000027422)	SMARCE1 (ENSPPAG00000037636)	CCR7 (ENSPPAG00000042341)	TNS4 (ENSPPAG00000028272)	ENSPPAG00000034557	TOP2A (ENSPPAG00000043649)	ENSPPAG00000043874	CDC6 (ENSPPAG00000038406)	WIPF2 (ENSPPAG00000041889)
Orangutan	MODERN SPECIES	8	KRTAP4-8 (ENSPPYG00000008438)	ENSPPYG00000008437	ENSPPYG00000036502	ENSPPYG00000030171	ENSPPYG00000037202	KRTAP1-1 (ENSPPYG00000008442)	KRTAP1-4 (ENSPPYG00000008958)	KRTAP1-5 (ENSPPYG00000008959)	KRTAP3-1 (ENSPPYG00000035960)	ENSPPYG00000041168	ENSPPYG00000035156	KRT40 (ENSPPYG00000008445)	KRT39 (ENSPPYG00000008446)	KRT23 (ENSPPYG00000008447)	KRT20 (ENSPPYG00000030597) #21	KRT12 (ENSPPYG00000041076) #22	ENSPPYG00000008448	KRT10 (ENSPPYG00000008449)	KRT28 (ENSPPYG00000008450)	KRT27 (ENSPPYG00000008451)	KRT26 (ENSPPYG00000008452)	KRT25 (ENSPPYG00000008453)	KRT24 (ENSPPYG00000008454)	KRT222 (ENSPPYG00000008455)	SMARCE1 (ENSPPYG00000008456)	CCR7 (ENSPPYG00000008457)	TNS4 (ENSPPYG00000040458)	IGFBP4 (ENSPPYG00000039119)	TOP2A (ENSPPYG00000008460)	GJD3 (ENSPPYG00000008461)	RARA (ENSPPYG00000008462)
Gibbon	MODERN SPECIES	9	ETV4 (ENSNLEG00000005715)	ENSNLEG00000026769	ENSNLEG00000031604	ARL4D (ENSNLEG00000032904)	KRTAP4-11 (ENSNLEG00000002385)	KRTAP4-9 (ENSNLEG00000002384)	ENSNLEG00000002382	KRTAP1-5 (ENSNLEG00000029608)	KRTAP1-4 (ENSNLEG00000002379)	ENSNLEG00000036039	ENSNLEG00000036205	KRT40 (ENSNLEG00000002340)	KRT39 (ENSNLEG00000002318)	KRT23 (ENSNLEG00000002316)	KRT20 (ENSNLEG00000002280) #21	KRT12 (ENSNLEG00000002251) #22	KRT10 (ENSNLEG00000002202)	KRT28 (ENSNLEG00000027288)	KRT27 (ENSNLEG00000002229)	KRT26 (ENSNLEG00000002206)	ENSNLEG00000002204	KRT25 (ENSNLEG00000002158)	KRT24 (ENSNLEG00000002105)	KRT222 (ENSNLEG00000002095)	SMARCE1 (ENSNLEG00000001957)	CCR7 (ENSNLEG00000001950)	TNS4 (ENSNLEG00000001944)	IGFBP4 (ENSNLEG00000001919)	TOP2A (ENSNLEG00000001840)	GJD3 (ENSNLEG00000001839)	RARA (ENSNLEG00000001793)
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486.y.a	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000162736	ENSGT00940000160443.o.c	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00940000160443.o.d.a	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000162736.s.b.a.b	ENSGT00940000162736.s.b.a.a.b	ENSGT00940000162736.s.b.a.a.a	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Vervet Monkey	MODERN SPECIES	7	KRTAP4-7 (ENSCSAG00000002851)	ENSCSAG00000019029	ENSCSAG00000019030	ENSCSAG00000019031	ENSCSAG00000019032	ENSCSAG00000002849	KRTAP1-4 (ENSCSAG00000019033)	ENSCSAG00000019034	KRTAP3-1 (ENSCSAG00000019035)	ENSCSAG00000019036	ENSCSAG00000019037	KRT40 (ENSCSAG00000002848)	KRT39 (ENSCSAG00000002844)	KRT23 (ENSCSAG00000002841)	KRT20 (ENSCSAG00000002839) #21	KRT12 (ENSCSAG00000002838) #22	KRT10 (ENSCSAG00000002835)	KRT28 (ENSCSAG00000002833)	KRT27 (ENSCSAG00000002830)	KRT26 (ENSCSAG00000002826)	KRT25 (ENSCSAG00000002820)	KRT24 (ENSCSAG00000002815)	KRT222 (ENSCSAG00000002811)	SMARCE1 (ENSCSAG00000002806)	CCR7 (ENSCSAG00000002800)	TNS4 (ENSCSAG00000002797)	IGFBP4 (ENSCSAG00000002792)	ENSCSAG00000002791	TOP2A (ENSCSAG00000002790)	ENSCSAG00000002788	GJD3 (ENSCSAG00000019038)
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000162736.s.b.a.b	ENSGT00940000154448.b.b.b.b.m.a	ENSGT00940000162736.t	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00940000164263	ENSGT00940000163931	ENSGT00940000163975	ENSGT00940000154448.b.b.b.b.m.a	ENSGT00940000162736.t	ENSGT00940000160443.o.c	ENSGT00940000162736.s.a.a.a	ENSGT00940000160443.p	ENSGT00940000160443.o.d.a	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Olive baboon	MODERN SPECIES	8	ENSPANG00000030200	ENSPANG00000033743	ENSPANG00000032465	ENSPANG00000021570	ENSPANG00000048794	ENSPANG00000049370	ENSPANG00000049731	KRTAP1-4 (ENSPANG00000023265)	ENSPANG00000045487	KRTAP3-1 (ENSPANG00000002591)	ENSPANG00000049303	KRT40 (ENSPANG00000021567)	KRT39 (ENSPANG00000021566)	KRT23 (ENSPANG00000021565)	KRT20 (ENSPANG00000021564) #21	KRT12 (ENSPANG00000021563) #22	KRT10 (ENSPANG00000021616)	KRT28 (ENSPANG00000032109)	KRT27 (ENSPANG00000021625)	KRT26 (ENSPANG00000021624)	KRT25 (ENSPANG00000021623)	KRT24 (ENSPANG00000021622)	KRT222 (ENSPANG00000036008)	ENSPANG00000021619	CCR7 (ENSPANG00000047079)	TNS4 (ENSPANG00000021664)	IGFBP4 (ENSPANG00000021663)	TOP2A (ENSPANG00000021661)	GJD3 (ENSPANG00000021660)	RARA (ENSPANG00000021658)	CDC6 (ENSPANG00000021657)
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00940000163841.c	ENSGT00940000153980.j.d	ENSGT00940000156135.h.f.a	ENSGT00940000156135.h.f.b.a.b	ENSGT00940000156135.h.f.b.b	ENSGT00940000163975	ENSGT00940000154448.b.b.b.b.m.a	ENSGT00940000162736.t	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00390000001157.A.b	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Drill	MODERN SPECIES	1283	ENSMLEG00000028300	KRTAP4-1 (ENSMLEG00000039471)	KRTAP4-2 (ENSMLEG00000032197)	KRTAP4-3 (ENSMLEG00000028103)	KRTAP4-5 (ENSMLEG00000014819)	ENSMLEG00000029543	ENSMLEG00000000614	ENSMLEG00000004772	ENSMLEG00000018982	ENSMLEG00000041308	KRTAP3-1 (ENSMLEG00000014783)	KRT40 (ENSMLEG00000029742)	KRT39 (ENSMLEG00000037917)	KRT23 (ENSMLEG00000029121)	KRT20 (ENSMLEG00000039504) #21	KRT12 (ENSMLEG00000035998) #22	ENSMLEG00000024984	KRT10 (ENSMLEG00000026149)	KRT28 (ENSMLEG00000042231)	KRT27 (ENSMLEG00000043409)	KRT26 (ENSMLEG00000016638)	KRT25 (ENSMLEG00000043162)	KRT24 (ENSMLEG00000042485)	KRT222 (ENSMLEG00000027116)	SMARCE1 (ENSMLEG00000035376)	CCR7 (ENSMLEG00000031221)	TNS4 (ENSMLEG00000039591)	IGFBP4 (ENSMLEG00000038307)	TOP2A (ENSMLEG00000040900)	RARA (ENSMLEG00000042406)	CDC6 (ENSMLEG00000017384)
Sooty mangabey	MODERN SPECIES	564	KRT33A (ENSCATG00000039355)	ENSCATG00000029615	ENSCATG00000043038	ENSCATG00000042310	KRTAP9-1 (ENSCATG00000041663)	KRTAP4-4 (ENSCATG00000042277)	KRTAP4-3 (ENSCATG00000033768)	ENSCATG00000021011	ENSCATG00000034203	ENSCATG00000037125	KRTAP3-1 (ENSCATG00000021424)	KRT40 (ENSCATG00000034790)	KRT39 (ENSCATG00000036783)	KRT23 (ENSCATG00000040372)	KRT20 (ENSCATG00000039872) #21	KRT12 (ENSCATG00000039373) #22	ENSCATG00000009301	KRT10 (ENSCATG00000044216)	KRT28 (ENSCATG00000013336)	KRT27 (ENSCATG00000017114)	KRT26 (ENSCATG00000032089)	KRT25 (ENSCATG00000032084)	KRT24 (ENSCATG00000040299)	KRT222 (ENSCATG00000025409)	SMARCE1 (ENSCATG00000033223)	CCR7 (ENSCATG00000041409)	TNS4 (ENSCATG00000031207)	IGFBP4 (ENSCATG00000035081)	TOP2A (ENSCATG00000030085)	GJD3 (ENSCATG00000021931)	RARA (ENSCATG00000044638)
Macaca	ANCESTRAL SPECIES	4	ENSGT00950000183407	ENSGT00940000163658	ENSGT00940000164459	ENSGT00940000156135.h.f.a	ENSGT00940000156135.h.f.b.a.a.b.a	ENSGT00940000162736.s.a.a.a	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00390000001157.A.b	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000156135.h.f.b.a.a.b.a	ENSGT00940000156135.h.f.b.a.a.b.b.b	ENSGT00940000163931	ENSGT00940000159486.y.a	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000162736.s.b.a.b	ENSGT00940000160443.o.c	ENSGT00940000160443.o.d.a	ENSGT00940000160443.p	ENSGT00940000160443.o.d.b	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d.p.a	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Rhesus	MODERN SPECIES	7	KRTAP4-1 (ENSMMUG00000065282)	KRTAP4-2 (ENSMMUG00000045776)	ENSMMUG00000020305	KRTAP4-6 (ENSMMUG00000038207)	ENSMMUG00000045996	ENSMMUG00000050719	ENSMMUG00000062533	ENSMMUG00000053239	ENSMMUG00000020301	ENSMMUG00000020299	KRTAP1-4 (ENSMMUG00000020300)	KRT40 (ENSMMUG00000001142)	KRT39 (ENSMMUG00000001510)	KRT23 (ENSMMUG00000001505)	KRT20 (ENSMMUG00000001503) #21	KRT12 (ENSMMUG00000001502) #22	ENSMMUG00000043282	KRT10 (ENSMMUG00000001500)	KRT28 (ENSMMUG00000001499)	KRT27 (ENSMMUG00000001497)	KRT26 (ENSMMUG00000001495)	KRT25 (ENSMMUG00000001492)	KRT24 (ENSMMUG00000023592)	KRT222 (ENSMMUG00000004004)	SMARCE1 (ENSMMUG00000004005)	CCR7 (ENSMMUG00000002102)	TNS4 (ENSMMUG00000009386)	IGFBP4 (ENSMMUG00000009384)	TOP2A (ENSMMUG00000008941)	GJD3 (ENSMMUG00000012489)	RARA (ENSMMUG00000012486)
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000034680	KRTAP4-6 (ENSMFAG00000002460)	ENSMFAG00000028572	KRTAP4-7 (ENSMFAG00000000596)	ENSMFAG00000051497	ENSMFAG00000056804	ENSMFAG00000036831	KRTAP1-4 (ENSMFAG00000001642)	ENSMFAG00000046213	KRT40 (ENSMFAG00000044976)	ENSMFAG00000052202	KRT39 (ENSMFAG00000033201)	ENSMFAG00000060620	KRT23 (ENSMFAG00000038526)	KRT20 (ENSMFAG00000003933) #21	KRT12 (ENSMFAG00000003650) #22	ENSMFAG00000016338	KRT10 (ENSMFAG00000038850)	KRT28 (ENSMFAG00000040928)	KRT27 (ENSMFAG00000039079)	KRT26 (ENSMFAG00000001350)	KRT25 (ENSMFAG00000037286)	KRT24 (ENSMFAG00000039579)	KRT222 (ENSMFAG00000035858)	ENSMFAG00000042285	CCR7 (ENSMFAG00000032012)	TNS4 (ENSMFAG00000001585)	IGFBP4 (ENSMFAG00000043180)	TOP2A (ENSMFAG00000002270)	ENSMFAG00000055548	ENSMFAG00000010310
Pig-tailed macaque	MODERN SPECIES	494	ENSMNEG00000033695	KRTAP4-5 (ENSMNEG00000035983)	ENSMNEG00000035649	ENSMNEG00000045170	ENSMNEG00000042925	ENSMNEG00000001165	ENSMNEG00000023777	ENSMNEG00000038682	ENSMNEG00000043725	ENSMNEG00000029591	KRTAP3-1 (ENSMNEG00000002270)	KRT40 (ENSMNEG00000040425)	KRT39 (ENSMNEG00000045305)	KRT23 (ENSMNEG00000042071)	KRT20 (ENSMNEG00000029478) #21	KRT12 (ENSMNEG00000004668) #22	ENSMNEG00000032796	KRT10 (ENSMNEG00000035663)	KRT28 (ENSMNEG00000045361)	KRT27 (ENSMNEG00000028793)	KRT26 (ENSMNEG00000044933)	KRT25 (ENSMNEG00000035206)	KRT24 (ENSMNEG00000043164)	KRT222 (ENSMNEG00000040062)	SMARCE1 (ENSMNEG00000010025)	CCR7 (ENSMNEG00000030706)	TNS4 (ENSMNEG00000040756)	IGFBP4 (ENSMNEG00000041735)	TOP2A (ENSMNEG00000030734)	GJD3 (ENSMNEG00000006880)	RARA (ENSMNEG00000029542)
Rhinopithecus	ANCESTRAL SPECIES	61			ENSGT00940000165435	ENSGT00940000163975	ENSGT00940000159486.z	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486.y.a	ENSGT00940000162736.q	ENSGT00940000162736.r	ENSGT00940000160443.o.d.a	ENSGT00390000001157.A.b	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00390000016445	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.c.b.a.b.a	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997
Black snub-nosed monkey	MODERN SPECIES	638	ENSRBIG00000038944	ENSRBIG00000036042	ENSRBIG00000033838	KRTAP4-2 (ENSRBIG00000030295)	ENSRBIG00000029755	ENSRBIG00000040600	ENSRBIG00000025008	ENSRBIG00000027251	ENSRBIG00000029137	ENSRBIG00000038757	KRTAP3-1 (ENSRBIG00000001148)	KRT40 (ENSRBIG00000033402)	KRT39 (ENSRBIG00000031920)	KRT23 (ENSRBIG00000029190)	KRT20 (ENSRBIG00000039923) #21	KRT12 (ENSRBIG00000028260) #22	ENSRBIG00000033196	KRT10 (ENSRBIG00000042127)	KRT28 (ENSRBIG00000018840)	KRT27 (ENSRBIG00000041899)	KRT26 (ENSRBIG00000036214)	KRT25 (ENSRBIG00000044480)	KRT24 (ENSRBIG00000044202)	ENSRBIG00000036799	SMARCE1 (ENSRBIG00000040707)	CCR7 (ENSRBIG00000036537)	TNS4 (ENSRBIG00000032169)	IGFBP4 (ENSRBIG00000029579)	TOP2A (ENSRBIG00000027893)	RARA (ENSRBIG00000029995)	CDC6 (ENSRBIG00000042270)
Golden snub-nosed monkey	MODERN SPECIES	2684														KRT23 (ENSRROG00000032975)	KRT20 (ENSRROG00000045233) #21	KRT12 (ENSRROG00000036947) #22	ENSRROG00000034243	KRT10 (ENSRROG00000035060)	KRT28 (ENSRROG00000035612)	KRT27 (ENSRROG00000041641)	KRT26 (ENSRROG00000036051)	KRT25 (ENSRROG00000031435)	KRT24 (ENSRROG00000010823)	KRT222 (ENSRROG00000005797)	SMARCE1 (ENSRROG00000028858)	CCR7 (ENSRROG00000038793)	TNS4 (ENSRROG00000042906)	IGFBP4 (ENSRROG00000033641)	TOP2A (ENSRROG00000034836)	GJD3 (ENSRROG00000016401)	DPH1 (ENSRROG00000027589)
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000164350.B	ENSGT00940000165435	ENSGT00940000163975	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000162736	ENSGT00940000160443.r.b.a	ENSGT00940000160295	ENSGT00940000160443.r.a	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d.p.b	ENSGT00940000164415	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000164350.B	ENSGT00940000163975.c	ENSGT00940000156135.h.b.b	ENSGT00940000165435	ENSGT00940000163975.d	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000162736	ENSGT00940000160443.r.a	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d.p.a	ENSGT00940000164415	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00940000156135.h.b.a	ENSGT00940000164350.B	ENSGT00940000163975.c	ENSGT00940000156135.h.a.a	ENSGT00940000165435	ENSGT00940000163975.d	ENSGT00940000154448.b.b.b.b	ENSGT00940000162736	ENSGT00940000160443.r.b.a	ENSGT00940000160443.r.a	ENSGT00390000001157.A.b	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00940000164415	ENSGT00390000003628.b.c.b.a.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT00940000159997	ENSGT00530000063498.A
Capuchin	MODERN SPECIES	228	ENSCCAG00000034421	ENSCCAG00000020353	ENSCCAG00000035189	ENSCCAG00000026553	ENSCCAG00000030292	ENSCCAG00000030861	ENSCCAG00000022140	ENSCCAG00000024497	ENSCCAG00000017936	ENSCCAG00000021121	ENSCCAG00000022586	KRT40 (ENSCCAG00000032652)	KRT39 (ENSCCAG00000029088)	KRT23 (ENSCCAG00000030267)	KRT20 (ENSCCAG00000032974) #21	KRT12 (ENSCCAG00000032972) #22	KRT10 (ENSCCAG00000036373)	KRT28 (ENSCCAG00000037023)	KRT27 (ENSCCAG00000009302)	KRT26 (ENSCCAG00000022891)	KRT25 (ENSCCAG00000025845)	KRT24 (ENSCCAG00000037342)	KRT222 (ENSCCAG00000032779)	ENSCCAG00000021368	SMARCE1 (ENSCCAG00000025244)	CCR7 (ENSCCAG00000024858)	TNS4 (ENSCCAG00000032978)	IGFBP4 (ENSCCAG00000029322)	TOP2A (ENSCCAG00000025939)	ENSCCAG00000031517	RARA (ENSCCAG00000021724)
Bolivian squirrel monkey	MODERN SPECIES	208	ENSSBOG00000024889	ENSSBOG00000028255	ENSSBOG00000031036	ENSSBOG00000026326	KRTAP4-5 (ENSSBOG00000024832)	ENSSBOG00000003071	ENSSBOG00000031693	ENSSBOG00000031937	ENSSBOG00000032989	ENSSBOG00000001195	KRTAP3-1 (ENSSBOG00000021282)	KRT40 (ENSSBOG00000033336)	KRT39 (ENSSBOG00000023156)	KRT23 (ENSSBOG00000029946)	KRT20 (ENSSBOG00000020042) #21	KRT12 (ENSSBOG00000020046) #22	KRT10 (ENSSBOG00000034537)	KRT28 (ENSSBOG00000033194)	KRT26 (ENSSBOG00000031304)	KRT24 (ENSSBOG00000020285)	KRT222 (ENSSBOG00000035572)	SMARCE1 (ENSSBOG00000001180)	CCR7 (ENSSBOG00000028714)	TNS4 (ENSSBOG00000034575)	IGFBP4 (ENSSBOG00000022228)	TOP2A (ENSSBOG00000016584)	ENSSBOG00000028183	RARA (ENSSBOG00000034538)	CDC6 (ENSSBOG00000013277)	WIPF2 (ENSSBOG00000029118)	RAPGEFL1 (ENSSBOG00000029673)
Marmoset	MODERN SPECIES	17	ENSCJAG00000067750	KRTAP4-12 (ENSCJAG00000069967)	ENSCJAG00000082655	ENSCJAG00000081670	ENSCJAG00000080141	ENSCJAG00000074243	ENSCJAG00000083167	ENSCJAG00000038794	KRTAP3-1 (ENSCJAG00000044200)	ENSCJAG00000076427	ENSCJAG00000079566	KRT40 (ENSCJAG00000013706)	KRT39 (ENSCJAG00000013697)	ENSCJAG00000013664	KRT20 (ENSCJAG00000013679) #21	KRT12 (ENSCJAG00000013609) #22	KRT10 (ENSCJAG00000044765)	KRT24 (ENSCJAG00000034830)	KRT222 (ENSCJAG00000035627)	ENSCJAG00000013573	CCR7 (ENSCJAG00000075739)	TNS4 (ENSCJAG00000013560)	IGFBP4 (ENSCJAG00000013550)	TOP2A (ENSCJAG00000013478)	ENSCJAG00000065689	GJD3 (ENSCJAG00000046154)	RARA (ENSCJAG00000013440)	CDC6 (ENSCJAG00000011073)	ENSCJAG00000081240	ENSCJAG00000031546	TEX14 (ENSCJAG00000073487)
Mas night monkey	MODERN SPECIES	481						KRTAP4-7 (ENSANAG00000028643)	ENSANAG00000033154	ENSANAG00000019385	ENSANAG00000030978	ENSANAG00000031799	KRTAP3-1 (ENSANAG00000014505)	KRT40 (ENSANAG00000031905)	KRT39 (ENSANAG00000037576)	KRT23 (ENSANAG00000033242)	KRT20 (ENSANAG00000037651) #21	KRT12 (ENSANAG00000031208) #22	KRT10 (ENSANAG00000032560)	KRT28 (ENSANAG00000037757)	KRT27 (ENSANAG00000032615)	KRT26 (ENSANAG00000022112)	KRT25 (ENSANAG00000027137)	KRT24 (ENSANAG00000037902)	KRT222 (ENSANAG00000023560)	ENSANAG00000032353	CCR7 (ENSANAG00000021558)	TNS4 (ENSANAG00000036996)	IGFBP4 (ENSANAG00000002213)	TOP2A (ENSANAG00000025180)	ENSANAG00000026269	RARA (ENSANAG00000038222)	CDC6 (ENSANAG00000030612)
Tarsier	MODERN SPECIES	3915												KRT40 (ENSTSYG00000011333)	KRT39 (ENSTSYG00000008675)	KRT23 (ENSTSYG00000006431)	KRT20 (ENSTSYG00000011001) #21	KRT12 (ENSTSYG00000010990) #22	KRT10 (ENSTSYG00000009031)	KRT28 (ENSTSYG00000007469)	KRT27 (ENSTSYG00000007457)	KRT26 (ENSTSYG00000011414)	KRT25 (ENSTSYG00000009548)	ENSTSYG00000030238	KRT222 (ENSTSYG00000030456)	SMARCE1 (ENSTSYG00000012496)	CCR7 (ENSTSYG00000028282)
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000156135	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163975	ENSGT00940000162736	ENSGT00940000160295	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000163416	ENSGT00940000164263	ENSGT00940000154448.b.b.b.b	ENSGT00940000159486	ENSGT00940000163975	ENSGT00940000162736	ENSGT00940000155433	ENSGT00940000160443	ENSGT00390000001157.A.b	ENSGT00940000160295	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00940000155258.t	ENSGT00940000154403.a.a	ENSGT00950000183311	ENSGT00940000161311	ENSGT00940000161787	ENSGT00940000161991	ENSGT00940000163444	ENSGT00940000162088	ENSGT00940000153980.i.a	ENSGT00940000163426	ENSGT00390000001157.C	ENSGT00940000161968	ENSGT00940000162203	ENSGT00940000161077	ENSGT00940000161855 #21	ENSGT00940000159382 #22	ENSGT00940000160849	ENSGT00940000162192	ENSGT00940000161982	ENSGT00940000161950	ENSGT00940000161994	ENSGT00940000161783	ENSGT00940000159655	ENSGT00390000003628.b.d	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000159997	ENSGT00530000063498.A
Coquerels sifaka	MODERN SPECIES	120	KRTAP29-1 (ENSPCOG00000019509)	ENSPCOG00000013137	ENSPCOG00000022603	ENSPCOG00000017090	ENSPCOG00000026553	ENSPCOG00000014377	ENSPCOG00000021181	ENSPCOG00000014598	ENSPCOG00000012200	ENSPCOG00000015985	ENSPCOG00000004823	KRT40 (ENSPCOG00000017920)	KRT39 (ENSPCOG00000024190)	KRT23 (ENSPCOG00000015929)	KRT20 (ENSPCOG00000019180) #21	KRT12 (ENSPCOG00000013217) #22	ENSPCOG00000023362	KRT10 (ENSPCOG00000018225)	KRT28 (ENSPCOG00000025536)	KRT27 (ENSPCOG00000023758)	KRT26 (ENSPCOG00000025920)	KRT25 (ENSPCOG00000016980)	KRT24 (ENSPCOG00000018519)	KRT222 (ENSPCOG00000027280)	ENSPCOG00000013727	CCR7 (ENSPCOG00000016602)	TNS4 (ENSPCOG00000024055)	IGFBP4 (ENSPCOG00000013262)	TOP2A (ENSPCOG00000025407)	RARA (ENSPCOG00000024070)	CDC6 (ENSPCOG00000027397)
Greater bamboo lemur	MODERN SPECIES	1733											ENSPSMG00000010522	KRT40 (ENSPSMG00000010509)	KRT39 (ENSPSMG00000010491)	KRT23 (ENSPSMG00000010479)	KRT20 (ENSPSMG00000010469) #21	KRT12 (ENSPSMG00000010461) #22	KRT10 (ENSPSMG00000010450)	KRT28 (ENSPSMG00000010434)	KRT27 (ENSPSMG00000010420)	ENSPSMG00000010390
Mouse lemur	MODERN SPECIES	7	ENSMICG00000043010	ENSMICG00000034211	ENSMICG00000046956	ENSMICG00000007150	ENSMICG00000046748	ENSMICG00000034773	ENSMICG00000007164	ENSMICG00000046104	KRTAP4-3 (ENSMICG00000007155)	ENSMICG00000047933	ENSMICG00000037682	KRT40 (ENSMICG00000009912)	KRT39 (ENSMICG00000009899)	KRT23 (ENSMICG00000009894)	KRT20 (ENSMICG00000035159) #21	KRT12 (ENSMICG00000009875) #22	KRT10 (ENSMICG00000032358)	KRT28 (ENSMICG00000009865)	KRT27 (ENSMICG00000009856)	KRT26 (ENSMICG00000009852)	KRT25 (ENSMICG00000027114)	KRT24 (ENSMICG00000009839)	KRT222 (ENSMICG00000032628)	ENSMICG00000009821	CCR7 (ENSMICG00000028152)	TNS4 (ENSMICG00000009811)	IGFBP4 (ENSMICG00000009809)	TOP2A (ENSMICG00000009772)	RARA (ENSMICG00000029502)	CDC6 (ENSMICG00000045842)	WIPF2 (ENSMICG00000033471)
Bushbaby	MODERN SPECIES	133	ENSOGAG00000031966	ENSOGAG00000011446	ENSOGAG00000034704	ENSOGAG00000003105	KRTAP4-5 (ENSOGAG00000003102)	ENSOGAG00000034870	ENSOGAG00000025341	ENSOGAG00000024366	KRTAP3-1 (ENSOGAG00000003088)	ENSOGAG00000026860	ENSOGAG00000024415	KRT40 (ENSOGAG00000003085)	KRT39 (ENSOGAG00000003083)	KRT23 (ENSOGAG00000003082)	KRT20 (ENSOGAG00000003079) #21	KRT12 (ENSOGAG00000003076) #22	KRT10 (ENSOGAG00000003075)	KRT28 (ENSOGAG00000003074)	KRT27 (ENSOGAG00000003073)	KRT26 (ENSOGAG00000003070)	KRT25 (ENSOGAG00000003068)	KRT24 (ENSOGAG00000014264)	KRT222 (ENSOGAG00000024213)	ENSOGAG00000001652	CCR7 (ENSOGAG00000001650)	TNS4 (ENSOGAG00000001646)	IGFBP4 (ENSOGAG00000001644)	TOP2A (ENSOGAG00000001638)	GJD3 (ENSOGAG00000028723)	RARA (ENSOGAG00000024257)	CDC6 (ENSOGAG00000008542)