Euarchontoglires ANCESTRAL SPECIES 4 ENSGT00940000159486 ENSGT00940000163931 #11 ENSGT00940000154448.b.b.b.a.a ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000155433 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b ##30 ENSGT00940000164415 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT01100000265611 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000163931 #11 ENSGT00940000155433 ENSGT00940000162736 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Glires ANCESTRAL SPECIES 3 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000159486.e.a ENSGT00940000163931 #11 ENSGT00940000155433 ENSGT00940000162736 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Rodentia ANCESTRAL SPECIES 4 ENSGT00940000163931 #11 ENSGT00940000154448.b.b.b.b.e.a ENSGT00940000159486.e.a ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000162736 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Rodentia_A ANCESTRAL SPECIES 3 ENSGT00940000163931 #11 ENSGT00940000154448.b.b.b.b.e.a ENSGT00940000159486.e.a ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000162736 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Sciuridae ANCESTRAL SPECIES 4 ENSGT00940000163658 #7 ENSGT00940000164459 #8 ENSGT00940000156135 #10 ENSGT00940000163931 #11 ENSGT00940000155433 ENSGT00940000162736 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Marmotini ANCESTRAL SPECIES 8 ENSGT00940000161991 ENSGT00940000153980.j.a.b.b.c.a ENSGT00940000163426 ENSGT00940000153980.j.a.b.b.c.b ENSGT00940000153980.j.a.b.b.d ENSGT00860000136155 ENSGT00940000163658 #7 ENSGT00940000164459 #8 ENSGT00390000001157.B #15 ENSGT00390000001157.C.gc.b #16 ENSGT00390000001157.C.gc.a #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Marmotini_b ANCESTRAL SPECIES 5 ENSGT00940000153980.j.a.b.b.c.a ENSGT00940000153980.j.a.a ENSGT00940000153980.j.a.b.b.c.b ENSGT00940000153980.j.a.b.b.d ENSGT00940000163416 ENSGT00940000155433 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.B #15 ENSGT00390000001157.C.gc.b #16 ENSGT00390000001157.C.gc.a #17 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Arctic ground squirrel MODERN SPECIES 46 KRTAP16-1 (ENSUPAG00010008810) #7 KRTAP29-1 (ENSUPAG00010008797) #8 ENSUPAG00010008769 #9 ENSUPAG00010008754 #10 ENSUPAG00010008750 #11 ENSUPAG00010008626 #12 ENSUPAG00010008623 #13 ENSUPAG00010008620 #14 ENSUPAG00010008616 #15 ENSUPAG00010008611 #16 ENSUPAG00010008604 #17 KRT40 (ENSUPAG00010008559) #18 KRT39 (ENSUPAG00010008539) #19 KRT23 (ENSUPAG00010008531) #20 KRT20 (ENSUPAG00010008517) #21 KRT12 (ENSUPAG00010008495) #22 KRT10 (ENSUPAG00010008483) #23 KRT28 (ENSUPAG00010008467) #24 KRT27 (ENSUPAG00010008459) #25 KRT26 (ENSUPAG00010008447) #26 KRT25 (ENSUPAG00010008441) #27 KRT24 (ENSUPAG00010008434) #28 KRT222 (ENSUPAG00010008427) #29 SMARCE1 (ENSUPAG00010008422) #30 CCR7 (ENSUPAG00010008418) #31 TNS4 (ENSUPAG00010008407) #32 IGFBP4 (ENSUPAG00010008401) #33 TOP2A (ENSUPAG00010008363) #34 RARA (ENSUPAG00010008330) #35 CDC6 (ENSUPAG00010008314) #36 WIPF2 (ENSUPAG00010008280) #37 Squirrel MODERN SPECIES 90 ENSSTOG00000013195 ENSSTOG00000031988 ENSSTOG00000032994 ENSSTOG00000033084 ENSSTOG00000027734 ENSSTOG00000023947 ENSSTOG00000029114 ENSSTOG00000021731 ENSSTOG00000012673 #12 ENSSTOG00000012507 #13 ENSSTOG00000027131 #14 ENSSTOG00000025033 ##14 ENSSTOG00000019917 ##14 KRT39 (ENSSTOG00000013190) #19 KRT23 (ENSSTOG00000013795) #20 KRT12 (ENSSTOG00000013295) #22 KRT10 (ENSSTOG00000002204) #23 KRT28 (ENSSTOG00000032131) #24 KRT27 (ENSSTOG00000002187) #25 KRT26 (ENSSTOG00000034065) #26 KRT25 (ENSSTOG00000002183) #27 KRT24 (ENSSTOG00000002178) #28 KRT222 (ENSSTOG00000029003) #29 SMARCE1 (ENSSTOG00000002175) #30 CCR7 (ENSSTOG00000001864) #31 TNS4 (ENSSTOG00000004876) #32 IGFBP4 (ENSSTOG00000029166) #33 TOP2A (ENSSTOG00000004794) #34 GJD3 (ENSSTOG00000019754) RARA (ENSSTOG00000004746) #35 CDC6 (ENSSTOG00000004716) #36 Alpin marmot MODERN SPECIES 42 ENSMMMG00000006802 ENSMMMG00000007015 KRTAP16-1 (ENSMMMG00000007017) #7 ENSMMMG00000007037 #9 ENSMMMG00000007061 ENSMMMG00000007085 ENSMMMG00000007146 #13 ENSMMMG00000007150 #14 ENSMMMG00000007156 #15 ENSMMMG00000007160 #16 ENSMMMG00000007167 #17 KRT40 (ENSMMMG00000007173) #18 KRT39 (ENSMMMG00000007199) #19 KRT23 (ENSMMMG00000007227) #20 KRT20 (ENSMMMG00000007239) #21 KRT12 (ENSMMMG00000007259) #22 KRT10 (ENSMMMG00000007279) #23 KRT28 (ENSMMMG00000007288) #24 KRT27 (ENSMMMG00000007294) #25 KRT26 (ENSMMMG00000007307) #26 KRT25 (ENSMMMG00000007316) #27 KRT24 (ENSMMMG00000007326) #28 KRT222 (ENSMMMG00000007351) #29 SMARCE1 (ENSMMMG00000007365) #30 CCR7 (ENSMMMG00000007384) #31 TNS4 (ENSMMMG00000007390) #32 IGFBP4 (ENSMMMG00000007401) #33 TOP2A (ENSMMMG00000007405) #34 RARA (ENSMMMG00000007451) #35 CDC6 (ENSMMMG00000007492) #36 WIPF2 (ENSMMMG00000007511) #37 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005002182 ENSSVLG00005002196 ENSSVLG00005002212 ENSSVLG00005002228 #12 ENSSVLG00005002240 #12 ENSSVLG00005002256 #12 KRTAP3-1 (ENSSVLG00005002274) ##14 ENSSVLG00005002286 #15 ENSSVLG00005002295 #16 ENSSVLG00005002312 #16 KRT40 (ENSSVLG00005002328) #18 KRT39 (ENSSVLG00005002361) #19 KRT23 (ENSSVLG00005002405) #20 KRT20 (ENSSVLG00005002465) #21 ENSSVLG00005002497 #22 ENSSVLG00005002521 #22 KRT10 (ENSSVLG00005002550) #23 KRT28 (ENSSVLG00005002575) #24 KRT27 (ENSSVLG00005002600) #25 KRT26 (ENSSVLG00005002624) #26 KRT25 (ENSSVLG00005002659) #27 KRT24 (ENSSVLG00005002690) #28 ENSSVLG00005002717 ENSSVLG00005002734 KRT222 (ENSSVLG00005002764) #29 SMARCE1 (ENSSVLG00005002799) #30 CCR7 (ENSSVLG00005002834) #31 TNS4 (ENSSVLG00005002865) #32 IGFBP4 (ENSSVLG00005002915) #33 TOP2A (ENSSVLG00005002957) #34 GJD3 (ENSSVLG00005002978) Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005002159 ENSSVLG00005002182 ENSSVLG00005002196 ENSSVLG00005002212 ENSSVLG00005002228 #12 ENSSVLG00005002240 #12 ENSSVLG00005002256 #12 KRTAP3-1 (ENSSVLG00005002274) ##14 ENSSVLG00005002286 #15 ENSSVLG00005002295 #16 ENSSVLG00005002312 #16 KRT40 (ENSSVLG00005002328) #18 KRT39 (ENSSVLG00005002361) #19 KRT23 (ENSSVLG00005002405) #20 KRT20 (ENSSVLG00005002465) #21 ENSSVLG00005002497 #22 ENSSVLG00005002521 #22 KRT10 (ENSSVLG00005002550) #23 KRT28 (ENSSVLG00005002575) #24 KRT27 (ENSSVLG00005002600) #25 KRT26 (ENSSVLG00005002624) #26 KRT25 (ENSSVLG00005002659) #27 KRT24 (ENSSVLG00005002690) #28 ENSSVLG00005002717 ENSSVLG00005002734 KRT222 (ENSSVLG00005002764) #29 SMARCE1 (ENSSVLG00005002799) #30 CCR7 (ENSSVLG00005002834) #31 TNS4 (ENSSVLG00005002865) #32 IGFBP4 (ENSSVLG00005002915) #33 TOP2A (ENSSVLG00005002957) #34 Hystricomorpha ANCESTRAL SPECIES 3 ENSGT00940000163658 #7 ENSGT00940000156135 #10 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000159486.f ENSGT00940000164263 ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00390000018397 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153980.j.a.a ENSGT00940000163658 #7 ENSGT00940000156135 #10 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000163931 #11 ENSGT00940000159486.e.a ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00390000018397 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153980.j.a.a ENSGT00940000163658 #7 ENSGT00940000156135 #10 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000163931 #11 ENSGT00940000159486.e.a ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00390000018397 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Long-tailed chinchilla MODERN SPECIES 158 ENSCLAG00000015082 ENSCLAG00000017906 ENSCLAG00000015077 ENSCLAG00000015152 ENSCLAG00000018011 ENSCLAG00000013798 ENSCLAG00000018055 #12 ENSCLAG00000015264 #12 ENSCLAG00000017986 #12 ENSCLAG00000018003 #13 KRTAP3-1 (ENSCLAG00000017980) ##14 ENSCLAG00000017863 #16 KRT40 (ENSCLAG00000014940) #18 KRT39 (ENSCLAG00000013824) #19 KRT23 (ENSCLAG00000014628) #20 KRT12 (ENSCLAG00000015867) #22 KRT10 (ENSCLAG00000017300) #23 KRT26 (ENSCLAG00000016281) #26 KRT28 (ENSCLAG00000015353) #24 KRT24 (ENSCLAG00000015192) #28 KRT222 (ENSCLAG00000016700) #29 SMARCE1 (ENSCLAG00000015303) #30 CCR7 (ENSCLAG00000016277) #31 TNS4 (ENSCLAG00000013766) #32 IGFBP4 (ENSCLAG00000015611) #33 ENSCLAG00000016494 TOP2A (ENSCLAG00000014772) #34 RARA (ENSCLAG00000016604) #35 CDC6 (ENSCLAG00000015306) #36 WIPF2 (ENSCLAG00000015019) #37 RAPGEFL1 (ENSCLAG00000013660) Degu MODERN SPECIES 97 KRTAP16-1 (ENSODEG00000017880) #7 ENSODEG00000017810 #10 ENSODEG00000017804 ENSODEG00000017801 #11 ENSODEG00000017790 ENSODEG00000017966 ENSODEG00000017878 ENSODEG00000020458 ENSODEG00000017796 #12 KRTAP3-1 (ENSODEG00000020553) ##14 ENSODEG00000020535 #16 ENSODEG00000020505 #16 KRT40 (ENSODEG00000017770) #18 KRT39 (ENSODEG00000017870) #19 KRT23 (ENSODEG00000017766) #20 KRT12 (ENSODEG00000017798) #22 KRT10 (ENSODEG00000018133) #23 KRT28 (ENSODEG00000017869) #24 KRT27 (ENSODEG00000017814) #25 KRT26 (ENSODEG00000017748) #26 KRT25 (ENSODEG00000017866) #27 KRT24 (ENSODEG00000017754) #28 KRT222 (ENSODEG00000017765) #29 ENSODEG00000017812 #30 CCR7 (ENSODEG00000017849) #31 TNS4 (ENSODEG00000017791) #32 IGFBP4 (ENSODEG00000017749) #33 RDM1 (ENSODEG00000017788) TOP2A (ENSODEG00000018034) #34 GJD3 (ENSODEG00000017680) RARA (ENSODEG00000017623) #35 Guinea pig MODERN SPECIES 53 ENSCPOG00000039942 ENSCPOG00000031771 #11 ENSCPOG00000040575 ENSCPOG00000037983 ENSCPOG00000030187 ENSCPOG00000034760 #12 ENSCPOG00000031237 #12 ENSCPOG00000038991 #12 ENSCPOG00000009368 #13 KRTAP3-1 (ENSCPOG00000011046) ##14 ENSCPOG00000038722 #16 ENSCPOG00000011044 #16 KRT40 (ENSCPOG00000011037) #18 KRT39 (ENSCPOG00000011033) #19 KRT23 (ENSCPOG00000011030) #20 ENSCPOG00000034129 #22 ENSCPOG00000033395 #23 ENSCPOG00000036632 #23 KRT28 (ENSCPOG00000033049) #24 KRT27 (ENSCPOG00000030964) #25 KRT26 (ENSCPOG00000038591) #26 KRT25 (ENSCPOG00000000495) #27 KRT24 (ENSCPOG00000032839) #28 KRT222 (ENSCPOG00000023380) #29 SMARCE1 (ENSCPOG00000000173) #30 CCR7 (ENSCPOG00000031024) #31 TNS4 (ENSCPOG00000010254) #32 IGFBP4 (ENSCPOG00000008055) #33 ENSCPOG00000001495 TOP2A (ENSCPOG00000006799) #34 GJD3 (ENSCPOG00000039750) Naked mole-rat female MODERN SPECIES 12 ENSHGLG00000033664 ENSHGLG00000011418 ENSHGLG00000046541 #11 ENSHGLG00000048443 ENSHGLG00000016152 ENSHGLG00000036467 ENSHGLG00000045568 #12 ENSHGLG00000020641 #13 KRTAP3-1 (ENSHGLG00000020885) ##14 ENSHGLG00000044225 #15 ENSHGLG00000049120 #16 ENSHGLG00000032503 #16 KRT40 (ENSHGLG00000014814) #18 KRT39 (ENSHGLG00000009907) #19 KRT23 (ENSHGLG00000012804) #20 KRT12 (ENSHGLG00000014783) #22 KRT10 (ENSHGLG00000010577) #23 KRT28 (ENSHGLG00000012817) #24 KRT26 (ENSHGLG00000018049) #26 KRT25 (ENSHGLG00000016382) #27 KRT24 (ENSHGLG00000016476) #28 KRT222 (ENSHGLG00000014433) #29 SMARCE1 (ENSHGLG00000014523) #30 ENSHGLG00000031415 CCR7 (ENSHGLG00000009998) #31 TNS4 (ENSHGLG00000011575) #32 IGFBP4 (ENSHGLG00000009899) #33 ENSHGLG00000011280 TOP2A (ENSHGLG00000012875) #34 GJD3 (ENSHGLG00000014304) RARA (ENSHGLG00000038969) #35 Rodentia_B ANCESTRAL SPECIES 1 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000163931 #11 ENSGT00940000159486.f ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Kangaroo rat MODERN SPECIES 326 ENSDORG00000026358 ENSDORG00000023366 #11 ENSDORG00000008477 ENSDORG00000023721 #11 ENSDORG00000012266 ENSDORG00000024033 ENSDORG00000028606 ENSDORG00000016176 #12 ENSDORG00000025402 #12 ENSDORG00000024187 #16 ENSDORG00000023985 #16 Krt40 (ENSDORG00000016181) #18 Krt39 (ENSDORG00000008898) #19 Krt23 (ENSDORG00000001625) #20 Krt20 (ENSDORG00000001623) #21 ENSDORG00000001618 #22 Krt10 (ENSDORG00000006753) #23 Krt28 (ENSDORG00000006752) #24 Krt27 (ENSDORG00000006751) #25 Krt26 (ENSDORG00000006750) #26 Krt25 (ENSDORG00000006749) #27 Krt24 (ENSDORG00000016005) #28 Krt222 (ENSDORG00000016002) #29 Smarce1 (ENSDORG00000015999) #30 Ccr7 (ENSDORG00000014123) #31 Tns4 (ENSDORG00000016056) #32 Igfbp4 (ENSDORG00000016055) #33 Top2a (ENSDORG00000016054) #34 Rara (ENSDORG00000023922) #35 Cdc6 (ENSDORG00000015184) #36 ENSDORG00000026557 #37 Myomorpha ANCESTRAL SPECIES ENSGT00940000164263 ENSGT00940000153980.j.a.a ENSGT00940000153980.j.a.b.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000159486.f ENSGT00940000155433 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Muroidea ANCESTRAL SPECIES ENSGT00940000159486.f.f ENSGT00940000154448.b.b.b.b.f ENSGT00940000159486.f.e.a.a.a ENSGT00940000155433 ENSGT00940000160295.ib.a #12 ENSGT00940000160295.ib.b.b.a.a #12 ENSGT00940000160295.ib.b.a #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000159486.f.f.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000160295.ib.a #12 ENSGT00940000160295.ib.b.a #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Cricetidae ANCESTRAL SPECIES ENSGT00940000154403.a.b ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000153980.j.a.b.a.b ENSGT00940000163426 ENSGT00940000153980.j.a.a ENSGT00940000160295.ib.a #12 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000153980.j.a.b.a.a.b ENSGT00940000163658 #7 ENSGT00940000159486.f.e.a.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000160295.ib.b.b.a.b #12 ENSGT00940000160295.ib.b.b.a.a #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Northern American deer mouse MODERN SPECIES 21 Gm11555 (ENSPEMG00000028694) ENSPEMG00000027729 ENSPEMG00000028223 ENSPEMG00000024614 ENSPEMG00000030371 ENSPEMG00000025752 Krtap1-5 (ENSPEMG00000014953) #13 Krtap3-1 (ENSPEMG00000014982) ##14 Gm11939 (ENSPEMG00000025106) #15 ENSPEMG00000027732 #16 ENSPEMG00000030050 #16 Krt40 (ENSPEMG00000011683) #18 Krt39 (ENSPEMG00000013051) #19 Krt23 (ENSPEMG00000010375) #20 Krt20 (ENSPEMG00000008907) #21 Krt12 (ENSPEMG00000012317) #22 Krt10 (ENSPEMG00000016211) #23 Krt28 (ENSPEMG00000017906) #24 Krt27 (ENSPEMG00000002310) #25 Krt26 (ENSPEMG00000012535) #26 Krt25 (ENSPEMG00000016149) #27 Krt24 (ENSPEMG00000017697) #28 Krt222 (ENSPEMG00000011259) #29 Smarce1 (ENSPEMG00000018043) #30 Ccr7 (ENSPEMG00000009706) #31 Tns4 (ENSPEMG00000020329) #32 Igfbp4 (ENSPEMG00000014210) #33 Top2a (ENSPEMG00000016393) #34 Gjd3 (ENSPEMG00000014917) Rara (ENSPEMG00000010534) #35 Cdc6 (ENSPEMG00000012427) #36 Prairie vole MODERN SPECIES 114 Gm11563 (ENSMOCG00000017454) ENSMOCG00000009228 ENSMOCG00000005151 ENSMOCG00000005136 ENSMOCG00000005678 ENSMOCG00000010132 #12 ENSMOCG00000003960 #12 Krtap1-5 (ENSMOCG00000012540) #13 Krtap3-1 (ENSMOCG00000020675) ##14 ENSMOCG00000005111 #16 ENSMOCG00000002845 #16 Krt40 (ENSMOCG00000016435) #18 Krt39 (ENSMOCG00000018914) #19 Krt23 (ENSMOCG00000014828) #20 Krt20 (ENSMOCG00000002735) #21 Krt12 (ENSMOCG00000001503) #22 Krt10 (ENSMOCG00000009134) #23 Krt28 (ENSMOCG00000007496) #24 Krt27 (ENSMOCG00000005020) #25 Krt26 (ENSMOCG00000014953) #26 Krt25 (ENSMOCG00000020569) #27 Krt24 (ENSMOCG00000017266) #28 Krt222 (ENSMOCG00000021148) #29 ENSMOCG00000015059 #30 Ccr7 (ENSMOCG00000004292) #31 Tns4 (ENSMOCG00000022959) #32 Igfbp4 (ENSMOCG00000021157) #33 Top2a (ENSMOCG00000013182) #34 Gjd3 (ENSMOCG00000005264) Rara (ENSMOCG00000016096) #35 Cdc6 (ENSMOCG00000021152) #36 Cricetinae ANCESTRAL SPECIES ENSGT00940000163658 #7 ENSGT00940000164459 #8 ENSGT00840000130699 ENSGT00940000159486.f.f.a.b ENSGT00940000163416 ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000160295.ib.b.b.a.b #12 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Golden Hamster MODERN SPECIES 674 ENSMAUG00000021591 ENSMAUG00000014874 ENSMAUG00000016423 ENSMAUG00000010652 Krtap1-3 (ENSMAUG00000013235) #12 Krtap3-1 (ENSMAUG00000010133) ##14 ENSMAUG00000010087 #16 Krt40 (ENSMAUG00000019288) #18 Krt39 (ENSMAUG00000011575) #19 Krt23 (ENSMAUG00000015956) #20 Krt20 (ENSMAUG00000012821) #21 Krt12 (ENSMAUG00000021614) #22 Krt10 (ENSMAUG00000022010) #23 Krt28 (ENSMAUG00000016117) #24 Krt27 (ENSMAUG00000010781) #25 Krt26 (ENSMAUG00000009507) #26 Krt25 (ENSMAUG00000016144) #27 Krt24 (ENSMAUG00000000934) #28 Krt222 (ENSMAUG00000009280) #29 Smarce1 (ENSMAUG00000006265) #30 Ccr7 (ENSMAUG00000021249) #31 Tns4 (ENSMAUG00000016240) #32 Igfbp4 (ENSMAUG00000008494) #33 Top2a (ENSMAUG00000010103) #34 Rara (ENSMAUG00000014473) #35 Cdc6 (ENSMAUG00000004369) #36 Wipf2 (ENSMAUG00000002857) #37 Chinese hamster chok1gshd MODERN SPECIES 33 ENSCGRG00001012466 ENSCGRG00001024559 ENSCGRG00001003344 ENSCGRG00001012468 #12 ENSCGRG00001021738 #12 ENSCGRG00001009734 #12 Krtap9-3 (ENSCGRG00001007897) #12 Krtap3-1 (ENSCGRG00001004619) ##14 Gm11939 (ENSCGRG00001005088) #15 ENSCGRG00001006304 #16 ENSCGRG00001012848 #16 Krt40 (ENSCGRG00001000083) #18 Krt39 (ENSCGRG00001019993) #19 Krt23 (ENSCGRG00001000115) #20 Krt20 (ENSCGRG00001022236) #21 Krt12 (ENSCGRG00001000815) #22 Krt10 (ENSCGRG00001006589) #23 Krt28 (ENSCGRG00001010998) #24 Krt27 (ENSCGRG00001020156) #25 Krt26 (ENSCGRG00001023067) #26 Krt25 (ENSCGRG00001019023) #27 Krt24 (ENSCGRG00001016600) #28 Krt222 (ENSCGRG00001001412) #29 Smarce1 (ENSCGRG00001010211) #30 Ccr7 (ENSCGRG00001022917) #31 Tns4 (ENSCGRG00001016573) #32 Igfbp4 (ENSCGRG00001002713) #33 Top2a (ENSCGRG00001020913) #34 Gjd3 (ENSCGRG00001008548) Rara (ENSCGRG00001021724) #35 CDC6 (ENSCGRG00001023158) #36 Murinae ANCESTRAL SPECIES 6 ENSGT00940000164263 ENSGT00940000159486.f.f.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433 ENSGT00940000160295.ib.a #12 ENSGT00940000160295.ib.b.b.b #12 ENSGT00940000160295.ib.b.a #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Mus ANCESTRAL SPECIES 2 ENSGT00940000159486.f.e.b ENSGT00940000154448.b.b.b.b.f ENSGT00940000155433.fb.b ENSGT00940000155433.fb.a ENSGT00940000160295.ib.a #12 ENSGT00940000160295.ib.b.b.b #12 ENSGT00940000160295.ib.b.a #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000159486.f.e.a.a.a ENSGT00940000155433.fb.b.a ENSGT00940000155433.fb.a ENSGT00940000155433.fb.b.b ENSGT00940000160295.ib.a #12 ENSGT00940000160295.ib.b.b.b #12 ENSGT00940000160295.ib.b.a #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000163416 ENSGT00840000130699.b ENSGT00840000130699.a.b ENSGT00940000155433.fb.b.b ENSGT00940000160295.ib.a #12 ENSGT00940000160295.ib.b.b.b #12 ENSGT00940000160295.ib.b.a #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Mouse MODERN SPECIES 2 Krtap2-4 (ENSMUSG00000060756) Gm11937 (ENSMUSG00000058725) Gm11938 (ENSMUSG00000057674) Krtap9-3 (ENSMUSG00000049809) #12 Krtap1-3 (ENSMUSG00000078131) #12 Krtap1-4 (ENSMUSG00000075567) #12 Krtap1-5 (ENSMUSG00000047253) #13 Krtap3-1 (ENSMUSG00000047564) ##14 Gm11939 (ENSMUSG00000078132) #15 Krtap3-2 (ENSMUSG00000069721) #16 Krtap3-3 (ENSMUSG00000069722) #16 Krt40 (ENSMUSG00000059169) #18 Krt39 (ENSMUSG00000064165) #19 Krt23 (ENSMUSG00000006777) #20 Krt20 (ENSMUSG00000035775) #21 Krt12 (ENSMUSG00000020912) #22 Krt10 (ENSMUSG00000019761) #23 Krt28 (ENSMUSG00000055937) #24 Krt27 (ENSMUSG00000017588) #25 Krt26 (ENSMUSG00000075570) #26 Krt25 (ENSMUSG00000035831) #27 Krt24 (ENSMUSG00000020913) #28 Krt222 (ENSMUSG00000035849) #29 Smarce1 (ENSMUSG00000037935) #30 Ccr7 (ENSMUSG00000037944) #31 Tns4 (ENSMUSG00000017607) #32 Igfbp4 (ENSMUSG00000017493) #33 Top2a (ENSMUSG00000020914) #34 Gjd3 (ENSMUSG00000047197) Rara (ENSMUSG00000037992) #35 Cdc6 (ENSMUSG00000017499) #36 Mus_C ANCESTRAL SPECIES 3 ENSGT00940000159486.f.f.b.a ENSGT00940000154448.b.b.a.b.b.a ENSGT00940000154448.b.b.a.a.b ENSGT00940000155433.fb.a ENSGT00940000160295.ib.a #12 ENSGT00940000160295.ib.b.b.b #12 ENSGT00940000160295.ib.b.a #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Steppe mouse MODERN SPECIES 2890 ENSMSIG00000025810 ENSMSIG00000025818 ENSMSIG00000025826 Krtap2-4 (ENSMSIG00000025829) Krtap9-3 (ENSMSIG00000025835) #12 Krtap1-3 (ENSMSIG00000025841) #12 Krtap1-4 (ENSMSIG00000025846) #12 Krtap1-5 (ENSMSIG00000025851) #13 Krtap3-1 (ENSMSIG00000025854) ##14 Gm11939 (ENSMSIG00000025860) #15 ENSMSIG00000025863 #16 Krt40 (ENSMSIG00000025867) #18 Krt39 (ENSMSIG00000025878) #19 Krt23 (ENSMSIG00000025887) #20 Krt20 (ENSMSIG00000025894) #21 Krt12 (ENSMSIG00000025906) #22 Krt10 (ENSMSIG00000025917) #23 Krt28 (ENSMSIG00000025924) #24 Krt27 (ENSMSIG00000025937) #25 Krt26 (ENSMSIG00000025947) #26 Krt25 (ENSMSIG00000025951) #27 Krt24 (ENSMSIG00000025961) #28 Krt222 (ENSMSIG00000025974) #29 ENSMSIG00000025987 #30 ENSMSIG00000026011 Ccr7 (ENSMSIG00000026032) #31 Tns4 (ENSMSIG00000026039) #32 Igfbp4 (ENSMSIG00000026061) #33 Top2a (ENSMSIG00000026083) #34 Gjd3 (ENSMSIG00000026168) Rara (ENSMSIG00000026176) #35 spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0017976 MGP_SPRETEiJ_G0017975 MGP_SPRETEiJ_G0017974 Krtap9-3 (MGP_SPRETEiJ_G0017973) #12 Krtap1-3 (MGP_SPRETEiJ_G0017972) #12 Krtap1-4 (MGP_SPRETEiJ_G0017971) #12 Krtap1-5 (MGP_SPRETEiJ_G0017970) #13 Krtap3-1 (MGP_SPRETEiJ_G0017969) ##14 Gm11939 (MGP_SPRETEiJ_G0017968) #15 MGP_SPRETEiJ_G0017967 #14 MGP_SPRETEiJ_G0017966 #16 Krt40 (MGP_SPRETEiJ_G0017965) #18 Krt39 (MGP_SPRETEiJ_G0017964) #19 Krt23 (MGP_SPRETEiJ_G0017963) #20 Krt20 (MGP_SPRETEiJ_G0017962) #21 Krt12 (MGP_SPRETEiJ_G0017961) #22 Krt10 (MGP_SPRETEiJ_G0017960) #23 Krt28 (MGP_SPRETEiJ_G0017959) #24 Krt27 (MGP_SPRETEiJ_G0017958) #25 Krt26 (MGP_SPRETEiJ_G0017957) #26 Krt25 (MGP_SPRETEiJ_G0017956) #27 Krt24 (MGP_SPRETEiJ_G0017955) #28 Krt222 (MGP_SPRETEiJ_G0017954) #29 Smarce1 (MGP_SPRETEiJ_G0017953) #30 Ccr7 (MGP_SPRETEiJ_G0017952) #31 Tns4 (MGP_SPRETEiJ_G0017951) #32 Igfbp4 (MGP_SPRETEiJ_G0017950) #33 Top2a (MGP_SPRETEiJ_G0017949) #34 Gjd3 (MGP_SPRETEiJ_G0017948) Rara (MGP_SPRETEiJ_G0017947) #35 Cdc6 (MGP_SPRETEiJ_G0017946) #36 Ryukyu mouse MODERN SPECIES 2 MGP_CAROLIEiJ_G0017132 MGP_CAROLIEiJ_G0017131 Gm11938 (MGP_CAROLIEiJ_G0017130) Krtap9-3 (MGP_CAROLIEiJ_G0017129) #12 Krtap1-3 (MGP_CAROLIEiJ_G0017128) #12 Krtap1-4 (MGP_CAROLIEiJ_G0017127) #12 Krtap1-5 (MGP_CAROLIEiJ_G0017126) #13 Krtap3-1 (MGP_CAROLIEiJ_G0017125) ##14 Gm11939 (MGP_CAROLIEiJ_G0017124) #15 MGP_CAROLIEiJ_G0017123 #16 MGP_CAROLIEiJ_G0017122 #16 Krt40 (MGP_CAROLIEiJ_G0017121) #18 Krt39 (MGP_CAROLIEiJ_G0017120) #19 Krt23 (MGP_CAROLIEiJ_G0017119) #20 Krt20 (MGP_CAROLIEiJ_G0017118) #21 Krt12 (MGP_CAROLIEiJ_G0017117) #22 Krt10 (MGP_CAROLIEiJ_G0017116) #23 Krt28 (MGP_CAROLIEiJ_G0017115) #24 Krt27 (MGP_CAROLIEiJ_G0017114) #25 Krt26 (MGP_CAROLIEiJ_G0017113) #26 Krt25 (MGP_CAROLIEiJ_G0017112) #27 Krt24 (MGP_CAROLIEiJ_G0017111) #28 Krt222 (MGP_CAROLIEiJ_G0017110) #29 Smarce1 (MGP_CAROLIEiJ_G0017109) #30 Ccr7 (MGP_CAROLIEiJ_G0017108) #31 Tns4 (MGP_CAROLIEiJ_G0017107) #32 Igfbp4 (MGP_CAROLIEiJ_G0017106) #33 Top2a (MGP_CAROLIEiJ_G0017105) #34 Gjd3 (MGP_CAROLIEiJ_G0017104) Rara (MGP_CAROLIEiJ_G0017103) #35 Cdc6 (MGP_CAROLIEiJ_G0017102) #36 Shrew mouse MODERN SPECIES 5 MGP_PahariEiJ_G0018261 MGP_PahariEiJ_G0018260 MGP_PahariEiJ_G0018259 Krtap9-3 (MGP_PahariEiJ_G0018258) #12 MGP_PahariEiJ_G0018257 #12 Krtap1-4 (MGP_PahariEiJ_G0018256) #12 Krtap1-5 (MGP_PahariEiJ_G0018255) #13 Krtap3-1 (MGP_PahariEiJ_G0018254) ##14 Gm11939 (MGP_PahariEiJ_G0018253) #15 MGP_PahariEiJ_G0018252 #16 MGP_PahariEiJ_G0018251 #16 Krt40 (MGP_PahariEiJ_G0018250) #18 Krt39 (MGP_PahariEiJ_G0018249) #19 Krt23 (MGP_PahariEiJ_G0018248) #20 Krt20 (MGP_PahariEiJ_G0018247) #21 Krt12 (MGP_PahariEiJ_G0018246) #22 Krt10 (MGP_PahariEiJ_G0018245) #23 MGP_PahariEiJ_G0018244 #24 Krt27 (MGP_PahariEiJ_G0018243) #25 Krt26 (MGP_PahariEiJ_G0018242) #26 Krt25 (MGP_PahariEiJ_G0018241) #27 Krt24 (MGP_PahariEiJ_G0018240) #28 Krt222 (MGP_PahariEiJ_G0018239) #29 Smarce1 (MGP_PahariEiJ_G0018238) #30 Ccr7 (MGP_PahariEiJ_G0018237) #31 Tns4 (MGP_PahariEiJ_G0018236) #32 MGP_PahariEiJ_G0018235 #33 Top2a (MGP_PahariEiJ_G0018234) #34 Gjd3 (MGP_PahariEiJ_G0018233) Rara (MGP_PahariEiJ_G0018232) #35 Cdc6 (MGP_PahariEiJ_G0018231) #36 Rat MODERN SPECIES 1 Krtap2-4l (ENSRNOG00000060847) Krtap2-1 (ENSRNOG00000065269) RGD1561684 (ENSRNOG00000063772) LOC100365588 (ENSRNOG00000053283) #12 Krtap1-3 (ENSRNOG00000052388) #12 Krtap1-1 (ENSRNOG00000012955) #12 Krtap1-5 (ENSRNOG00000054186) #13 Krtap3-1 (ENSRNOG00000012544) ##14 LOC120095334 (ENSRNOG00000060205) #15 Krtap3-2 (ENSRNOG00000049383) #16 Krtap3-3 (ENSRNOG00000045678) #16 Krt40 (ENSRNOG00000013896) #18 Krt39 (ENSRNOG00000031422) #19 Krt23 (ENSRNOG00000011907) #20 Krt20 (ENSRNOG00000027139) #21 Krt12 (ENSRNOG00000011986) #22 Krt10 (ENSRNOG00000030170) #23 Krt28 (ENSRNOG00000011846) #24 Krt27 (ENSRNOG00000011628) #25 Krt26 (ENSRNOG00000033617) #26 Krt25 (ENSRNOG00000011196) #27 Krt24 (ENSRNOG00000010970) #28 Krt222 (ENSRNOG00000010839) #29 Smarce1 (ENSRNOG00000010676) #30 Ccr7 (ENSRNOG00000010665) #31 Tns4 (ENSRNOG00000027350) #32 Igfbp4 (ENSRNOG00000010635) #33 Top2a (ENSRNOG00000053047) #34 Gjd3 (ENSRNOG00000051691) Rara (ENSRNOG00000009972) #35 Cdc6 (ENSRNOG00000027787) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 912 ENSNGAG00000014947 ENSNGAG00000015529 ENSNGAG00000015518 ENSNGAG00000016313 ENSNGAG00000015404 #12 ENSNGAG00000011138 #12 Krtap1-4 (ENSNGAG00000014313) #12 Krtap1-5 (ENSNGAG00000013189) #13 Krtap3-1 (ENSNGAG00000014967) ##14 ENSNGAG00000014681 #16 ENSNGAG00000015155 #16 Krt40 (ENSNGAG00000002573) #18 Krt39 (ENSNGAG00000017057) #19 Krt23 (ENSNGAG00000003686) #20 Krt20 (ENSNGAG00000012272) #21 Krt12 (ENSNGAG00000017518) #22 Krt10 (ENSNGAG00000017006) #23 Krt28 (ENSNGAG00000020295) #24 Krt27 (ENSNGAG00000019608) #25 Krt26 (ENSNGAG00000010579) #26 Krt25 (ENSNGAG00000000113) #27 Krt24 (ENSNGAG00000017103) #28 Krt222 (ENSNGAG00000014550) #29 ENSNGAG00000015419 #30 Ccr7 (ENSNGAG00000010036) #31 Lesser Egyptian jerboa MODERN SPECIES 56 ENSJJAG00000022802 ENSJJAG00000021359 ENSJJAG00000021927 ENSJJAG00000022794 ENSJJAG00000006288 ENSJJAG00000005972 ENSJJAG00000022051 #12 ENSJJAG00000006226 #12 Krtap3-1 (ENSJJAG00000006011) ##14 ENSJJAG00000006371 #16 ENSJJAG00000006041 #16 Krt40 (ENSJJAG00000022059) #18 Krt39 (ENSJJAG00000021955) #19 Krt23 (ENSJJAG00000022215) #20 Krt20 (ENSJJAG00000022728) #21 Krt12 (ENSJJAG00000021975) #22 Krt10 (ENSJJAG00000022778) #23 Krt28 (ENSJJAG00000022837) #24 Krt27 (ENSJJAG00000023044) #25 Krt26 (ENSJJAG00000009739) #26 Krt25 (ENSJJAG00000023627) #27 Krt24 (ENSJJAG00000023143) #28 Krt222 (ENSJJAG00000021966) #29 Smarce1 (ENSJJAG00000023161) #30 Ccr7 (ENSJJAG00000002196) #31 Tns4 (ENSJJAG00000003969) #32 Igfbp4 (ENSJJAG00000000680) #33 Top2a (ENSJJAG00000007045) #34 Gjd3 (ENSJJAG00000009539) Rara (ENSJJAG00000001668) #35 Cdc6 (ENSJJAG00000022817) #36 Lagomorpha ANCESTRAL SPECIES ENSGT00940000163931 #11 ENSGT00940000159486.f ENSGT00940000164263 ENSGT00940000154448.b.b.b.b.e.b.b ENSGT00940000159486.e.a ENSGT00940000155433 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.B #15 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Rabbit MODERN SPECIES 10 ENSOCUG00000036372 ENSOCUG00000021896 ENSOCUG00000031432 ENSOCUG00000030603 ENSOCUG00000032281 ENSOCUG00000036283 #12 ENSOCUG00000008528 #12 ENSOCUG00000029827 #13 KRTAP3-1 (ENSOCUG00000015615) ##14 ENSOCUG00000031203 #15 ENSOCUG00000024778 #16 ENSOCUG00000024352 #16 KRT40 (ENSOCUG00000015603) #18 KRT39 (ENSOCUG00000015593) #19 KRT23 (ENSOCUG00000017694) #20 KRT12 (ENSOCUG00000017689) #22 KRT28 (ENSOCUG00000015132) #24 KRT10 (ENSOCUG00000011731) #23 KRT26 (ENSOCUG00000008999) #26 KRT25 (ENSOCUG00000008992) #27 KRT222 (ENSOCUG00000027447) #29 SMARCE1 (ENSOCUG00000008981) #30 CCR7 (ENSOCUG00000025569) #31 TNS4 (ENSOCUG00000002830) #32 IGFBP4 (ENSOCUG00000002828) #33 TOP2A (ENSOCUG00000002814) #34 GJD3 (ENSOCUG00000004916) RARA (ENSOCUG00000004903) #35 CDC6 (ENSOCUG00000004898) #36 ENSOCUG00000029564 #37 RAPGEFL1 (ENSOCUG00000023409) Pika MODERN SPECIES 4691 KRT23 (ENSOPRG00000009842) #20 KRT20 (ENSOPRG00000009828) #21 KRT12 (ENSOPRG00000009810) #22 ENSOPRG00000009788 #23 ENSOPRG00000018471 #24 KRT27 (ENSOPRG00000009774) #25 KRT26 (ENSOPRG00000009761) #26 KRT25 (ENSOPRG00000009745) #27 KRT24 (ENSOPRG00000009728) #28 KRT222 (ENSOPRG00000018441) #29 Tree shrew MODERN SPECIES 4713 KRT20 (ENSTBEG00000016636) #21 KRT12 (ENSTBEG00000016553) #22 Primates ANCESTRAL SPECIES 3 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163931 #11 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT00940000164415 ENSGT00390000003628.b.c.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Haplorrhini ANCESTRAL SPECIES 6 ENSGT00940000156135 #10 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163931 #11 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT00940000164415 ENSGT00390000003628.b.c.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Simiiformes ANCESTRAL SPECIES 7 ENSGT00940000156135.h #10 ENSGT00940000164350.B ENSGT00940000164263 ENSGT00940000163931 #11 ENSGT00940000159486 ENSGT00940000163975 ENSGT00940000154448.b.b.b.b ENSGT00940000162736 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d.p.b #30 ENSGT00940000164415 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Catarrhini ANCESTRAL SPECIES 8 ENSGT00940000163975 ENSGT00940000165435 ENSGT00940000154448.b.b.b.b ENSGT00940000164350.B ENSGT00940000164350.A ENSGT00940000165697 ENSGT00940000162736 ENSGT00940000160443.o #13 ENSGT00940000160443.p #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Hominoidea ANCESTRAL SPECIES 13 ENSGT00940000164350.A ENSGT00940000164350.B ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000160443.o.a #13 ENSGT00940000160443.o.b.a #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.b.b #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Hominidae ANCESTRAL SPECIES 16 ENSGT00940000164350.B ENSGT00940000154448.b.b.b.b ENSGT00940000165435 ENSGT00940000163975.e.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000160443.o.a #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.b.b #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 1 ENSGT00940000163975.e.b ENSGT00940000163975.e.a.b ENSGT00940000163975.e.a.a ENSGT00940000159486 ENSGT00940000162736.w.a ENSGT00940000160443.o.a #13 ENSGT00940000160443.o.b.a #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.b.b #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C.x #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Gorilla MODERN SPECIES 18 ENSGGOG00000043973 ENSGGOG00000036943 ENSGGOG00000038087 ENSGGOG00000040059 ENSGGOG00000041957 KRTAP1-1 (ENSGGOG00000016411) #13 KRTAP1-3 (ENSGGOG00000008142) #13 ENSGGOG00000027718 #13 KRTAP3-1 (ENSGGOG00000025337) ##14 ENSGGOG00000043613 #16 ENSGGOG00000038810 #16 KRT40 (ENSGGOG00000006511) #18 KRT39 (ENSGGOG00000017063) #19 KRT23 (ENSGGOG00000025840) #20 KRT20 (ENSGGOG00000004278) #21 KRT12 (ENSGGOG00000004274) #22 ENSGGOG00000038478 KRT10 (ENSGGOG00000000457) #23 KRT28 (ENSGGOG00000009707) #24 KRT27 (ENSGGOG00000013291) #25 KRT26 (ENSGGOG00000011236) #26 KRT25 (ENSGGOG00000043356) #27 KRT24 (ENSGGOG00000009695) #28 KRT222 (ENSGGOG00000013714) #29 SMARCE1 (ENSGGOG00000011803) ##30 CCR7 (ENSGGOG00000016340) #31 TNS4 (ENSGGOG00000009684) #32 IGFBP4 (ENSGGOG00000009883) #33 TOP2A (ENSGGOG00000012704) #34 GJD3 (ENSGGOG00000003119) ENSGGOG00000003114 #35 Homo/Pan group ANCESTRAL SPECIES 2 ENSGT00940000163975.e.a.b ENSGT00940000163975.e.a.a ENSGT00940000159486 ENSGT00940000162736.w.a ENSGT00940000160443.o.a #13 ENSGT00940000160443.o.b.a #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.b.b #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C.x #16 ENSGT00390000001157.C.w #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Human MODERN SPECIES 8 KRTAP2-4 (ENSG00000213417) KRTAP2-3 (ENSG00000212724) KRTAP2-2 (ENSG00000214518) KRTAP2-1 (ENSG00000212725) KRTAP1-1 (ENSG00000188581) #13 KRTAP1-3 (ENSG00000221880) #13 KRTAP1-4 (ENSG00000204887) #13 KRTAP1-5 (ENSG00000221852) #13 KRTAP3-1 (ENSG00000212901) ##14 KRTAP3-2 (ENSG00000212900) #16 KRTAP3-3 (ENSG00000212899) #16 KRT40 (ENSG00000204889) #18 KRT39 (ENSG00000196859) #19 KRT23 (ENSG00000108244) #20 KRT20 (ENSG00000171431) #21 KRT12 (ENSG00000187242) #22 KRT10 (ENSG00000186395) #23 KRT28 (ENSG00000173908) #24 KRT27 (ENSG00000171446) #25 KRT26 (ENSG00000186393) #26 KRT25 (ENSG00000204897) #27 KRT24 (ENSG00000167916) #28 KRT222 (ENSG00000213424) #29 SMARCE1 (ENSG00000073584) ##30 CCR7 (ENSG00000126353) #31 TNS4 (ENSG00000131746) #32 IGFBP4 (ENSG00000141753) #33 TOP2A (ENSG00000131747) #34 GJD3 (ENSG00000183153) RARA (ENSG00000131759) #35 CDC6 (ENSG00000094804) #36 Pan ANCESTRAL SPECIES 3 ENSGT00940000165435 ENSGT00940000163975.e.b.b ENSGT00940000163975.f ENSGT00940000163975.e.b.a ENSGT00940000162736.w.a ENSGT00940000160443.o.a #13 ENSGT00940000160443.o.b.a #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.b.b #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C.x #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Chimpanzee MODERN SPECIES 8 KRTAP4-11 (ENSPTRG00000043038) ENSPTRG00000009149 ENSPTRG00000042904 ENSPTRG00000030932 KRTAP1-1 (ENSPTRG00000042384) #13 KRTAP1-3 (ENSPTRG00000039138) #13 KRTAP1-4 (ENSPTRG00000043306) #13 KRTAP1-5 (ENSPTRG00000009145) #13 KRTAP3-1 (ENSPTRG00000009141) ##14 ENSPTRG00000048871 #16 ENSPTRG00000049793 #16 KRT40 (ENSPTRG00000030928) #18 KRT39 (ENSPTRG00000023017) #19 KRT23 (ENSPTRG00000009137) #20 KRT20 (ENSPTRG00000009135) #21 KRT12 (ENSPTRG00000009134) #22 KRT10 (ENSPTRG00000009132) #23 KRT28 (ENSPTRG00000009131) #24 KRT27 (ENSPTRG00000009130) #25 KRT26 (ENSPTRG00000030927) #26 KRT25 (ENSPTRG00000009129) #27 KRT24 (ENSPTRG00000009128) #28 KRT222 (ENSPTRG00000034332) #29 SMARCE1 (ENSPTRG00000022902) ##30 CCR7 (ENSPTRG00000009125) #31 TNS4 (ENSPTRG00000009124) #32 IGFBP4 (ENSPTRG00000009123) #33 TOP2A (ENSPTRG00000009122) #34 GJD3 (ENSPTRG00000009121) RARA (ENSPTRG00000009120) #35 CDC6 (ENSPTRG00000009119) #36 Bonobo MODERN SPECIES 8 ENSPPAG00000035558 ENSPPAG00000034671 ENSPPAG00000043333 ENSPPAG00000024926 ENSPPAG00000000910 ENSPPAG00000036449 KRTAP1-1 (ENSPPAG00000017831) #13 KRTAP1-4 (ENSPPAG00000021249) #13 KRTAP1-5 (ENSPPAG00000012582) #13 KRTAP3-1 (ENSPPAG00000018240) ##14 ENSPPAG00000022850 #16 KRT40 (ENSPPAG00000031205) #18 KRT39 (ENSPPAG00000041593) #19 KRT23 (ENSPPAG00000030794) #20 KRT20 (ENSPPAG00000031348) #21 KRT12 (ENSPPAG00000034686) #22 KRT10 (ENSPPAG00000039195) #23 KRT28 (ENSPPAG00000027727) #24 KRT27 (ENSPPAG00000038824) #25 KRT26 (ENSPPAG00000043196) #26 KRT25 (ENSPPAG00000030815) #27 ENSPPAG00000032199 #28 KRT222 (ENSPPAG00000027422) #29 SMARCE1 (ENSPPAG00000037636) ##30 CCR7 (ENSPPAG00000042341) #31 TNS4 (ENSPPAG00000028272) #32 ENSPPAG00000034557 #33 TOP2A (ENSPPAG00000043649) #34 ENSPPAG00000043874 #35 CDC6 (ENSPPAG00000038406) #36 WIPF2 (ENSPPAG00000041889) #37 Orangutan MODERN SPECIES 8 KRTAP4-8 (ENSPPYG00000008438) ENSPPYG00000008437 ENSPPYG00000036502 ENSPPYG00000030171 ENSPPYG00000037202 KRTAP1-1 (ENSPPYG00000008442) #13 KRTAP1-4 (ENSPPYG00000008958) #13 KRTAP1-5 (ENSPPYG00000008959) #13 KRTAP3-1 (ENSPPYG00000035960) ##14 ENSPPYG00000041168 #16 ENSPPYG00000035156 #16 KRT40 (ENSPPYG00000008445) #18 KRT39 (ENSPPYG00000008446) #19 KRT23 (ENSPPYG00000008447) #20 KRT20 (ENSPPYG00000030597) #21 KRT12 (ENSPPYG00000041076) #22 ENSPPYG00000008448 KRT10 (ENSPPYG00000008449) #23 KRT28 (ENSPPYG00000008450) #24 KRT27 (ENSPPYG00000008451) #25 KRT26 (ENSPPYG00000008452) #26 KRT25 (ENSPPYG00000008453) #27 KRT24 (ENSPPYG00000008454) #28 KRT222 (ENSPPYG00000008455) #29 SMARCE1 (ENSPPYG00000008456) ##30 CCR7 (ENSPPYG00000008457) #31 TNS4 (ENSPPYG00000040458) #32 IGFBP4 (ENSPPYG00000039119) #33 TOP2A (ENSPPYG00000008460) #34 GJD3 (ENSPPYG00000008461) RARA (ENSPPYG00000008462) #35 Gibbon MODERN SPECIES 9 ETV4 (ENSNLEG00000005715) ENSNLEG00000026769 ENSNLEG00000031604 ARL4D (ENSNLEG00000032904) KRTAP4-11 (ENSNLEG00000002385) KRTAP4-9 (ENSNLEG00000002384) ENSNLEG00000002382 KRTAP1-5 (ENSNLEG00000029608) #13 KRTAP1-4 (ENSNLEG00000002379) #13 ENSNLEG00000036039 #16 ENSNLEG00000036205 #16 KRT40 (ENSNLEG00000002340) #18 KRT39 (ENSNLEG00000002318) #19 KRT23 (ENSNLEG00000002316) #20 KRT20 (ENSNLEG00000002280) #21 KRT12 (ENSNLEG00000002251) #22 KRT10 (ENSNLEG00000002202) #23 KRT28 (ENSNLEG00000027288) #24 KRT27 (ENSNLEG00000002229) #25 KRT26 (ENSNLEG00000002206) #26 ENSNLEG00000002204 KRT25 (ENSNLEG00000002158) #27 KRT24 (ENSNLEG00000002105) #28 KRT222 (ENSNLEG00000002095) #29 SMARCE1 (ENSNLEG00000001957) ##30 CCR7 (ENSNLEG00000001950) #31 TNS4 (ENSNLEG00000001944) #32 IGFBP4 (ENSNLEG00000001919) #33 TOP2A (ENSNLEG00000001840) #34 GJD3 (ENSNLEG00000001839) RARA (ENSNLEG00000001793) #35 Cercopithecidae ANCESTRAL SPECIES 6 ENSGT00940000154448.b.b.b.b ENSGT00940000159486.y.a ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000162736 ENSGT00940000160443.o.c #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.d.b #13 ENSGT00940000160443.o.d.a #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000162736.s.b.a.b ENSGT00940000162736.s.b.a.a.b ENSGT00940000162736.s.b.a.a.a ENSGT00940000160443.o.c #13 ENSGT00940000160443.o.d.a #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.d.b #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Vervet Monkey MODERN SPECIES 7 KRTAP4-7 (ENSCSAG00000002851) ENSCSAG00000019029 ENSCSAG00000019030 ENSCSAG00000019031 ENSCSAG00000019032 ENSCSAG00000002849 #13 KRTAP1-4 (ENSCSAG00000019033) #13 ENSCSAG00000019034 #13 KRTAP3-1 (ENSCSAG00000019035) ##14 ENSCSAG00000019036 #16 ENSCSAG00000019037 #16 KRT40 (ENSCSAG00000002848) #18 KRT39 (ENSCSAG00000002844) #19 KRT23 (ENSCSAG00000002841) #20 KRT20 (ENSCSAG00000002839) #21 KRT12 (ENSCSAG00000002838) #22 KRT10 (ENSCSAG00000002835) #23 KRT28 (ENSCSAG00000002833) #24 KRT27 (ENSCSAG00000002830) #25 KRT26 (ENSCSAG00000002826) #26 KRT25 (ENSCSAG00000002820) #27 KRT24 (ENSCSAG00000002815) #28 KRT222 (ENSCSAG00000002811) #29 SMARCE1 (ENSCSAG00000002806) #30 CCR7 (ENSCSAG00000002800) #31 TNS4 (ENSCSAG00000002797) #32 IGFBP4 (ENSCSAG00000002792) #33 ENSCSAG00000002791 TOP2A (ENSCSAG00000002790) #34 ENSCSAG00000002788 GJD3 (ENSCSAG00000019038) Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000162736.s.b.a.b ENSGT00940000154448.b.b.b.b.m.a ENSGT00940000162736.t ENSGT00940000160443.o.c #13 ENSGT00940000160443.o.d.a #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.d.b #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Cercopithecinae_b ANCESTRAL SPECIES 20 ENSGT00940000164263 ENSGT00940000163931 #11 ENSGT00940000163975 ENSGT00940000154448.b.b.b.b.m.a ENSGT00940000162736.t ENSGT00940000160443.o.c #13 ENSGT00940000162736.s.a.a.a ENSGT00940000160443.p #13 ENSGT00940000160443.o.d.a #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Olive baboon MODERN SPECIES 8 ENSPANG00000030200 ENSPANG00000033743 #11 ENSPANG00000032465 ENSPANG00000021570 ENSPANG00000048794 ENSPANG00000049370 ENSPANG00000049731 KRTAP1-4 (ENSPANG00000023265) #13 ENSPANG00000045487 #13 KRTAP3-1 (ENSPANG00000002591) ##14 ENSPANG00000049303 #16 KRT40 (ENSPANG00000021567) #18 KRT39 (ENSPANG00000021566) #19 KRT23 (ENSPANG00000021565) #20 KRT20 (ENSPANG00000021564) #21 KRT12 (ENSPANG00000021563) #22 KRT10 (ENSPANG00000021616) #23 KRT28 (ENSPANG00000032109) #24 KRT27 (ENSPANG00000021625) #25 KRT26 (ENSPANG00000021624) #26 KRT25 (ENSPANG00000021623) #27 KRT24 (ENSPANG00000021622) #28 KRT222 (ENSPANG00000036008) #29 ENSPANG00000021619 ##30 CCR7 (ENSPANG00000047079) #31 TNS4 (ENSPANG00000021664) #32 IGFBP4 (ENSPANG00000021663) #33 TOP2A (ENSPANG00000021661) #34 GJD3 (ENSPANG00000021660) RARA (ENSPANG00000021658) #35 CDC6 (ENSPANG00000021657) #36 Cercopithecinae_d ANCESTRAL SPECIES 7 ENSGT00940000163841.c ENSGT00940000153980.j.d ENSGT00940000156135.h.f.a #10 ENSGT00940000156135.h.f.b.a.b #10 ENSGT00940000156135.h.f.b.b #10 ENSGT00940000163975 ENSGT00940000154448.b.b.b.b.m.a ENSGT00940000162736.t ENSGT00940000160443.o.c #13 ENSGT00940000160443.o.d.a #13 ENSGT00390000001157.A.b ##14 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Drill MODERN SPECIES 1283 ENSMLEG00000028300 #10 KRTAP4-1 (ENSMLEG00000039471) KRTAP4-2 (ENSMLEG00000032197) KRTAP4-3 (ENSMLEG00000028103) KRTAP4-5 (ENSMLEG00000014819) ENSMLEG00000029543 ENSMLEG00000000614 ENSMLEG00000004772 ENSMLEG00000018982 ENSMLEG00000041308 #13 KRTAP3-1 (ENSMLEG00000014783) ##14 KRT40 (ENSMLEG00000029742) #18 KRT39 (ENSMLEG00000037917) #19 KRT23 (ENSMLEG00000029121) #20 KRT20 (ENSMLEG00000039504) #21 KRT12 (ENSMLEG00000035998) #22 ENSMLEG00000024984 KRT10 (ENSMLEG00000026149) #23 KRT28 (ENSMLEG00000042231) #24 KRT27 (ENSMLEG00000043409) #25 KRT26 (ENSMLEG00000016638) #26 KRT25 (ENSMLEG00000043162) #27 KRT24 (ENSMLEG00000042485) #28 KRT222 (ENSMLEG00000027116) #29 SMARCE1 (ENSMLEG00000035376) ##30 CCR7 (ENSMLEG00000031221) #31 TNS4 (ENSMLEG00000039591) #32 IGFBP4 (ENSMLEG00000038307) #33 TOP2A (ENSMLEG00000040900) #34 RARA (ENSMLEG00000042406) #35 CDC6 (ENSMLEG00000017384) #36 Sooty mangabey MODERN SPECIES 564 KRT33A (ENSCATG00000039355) ENSCATG00000029615 #10 ENSCATG00000043038 #10 ENSCATG00000042310 #10 KRTAP9-1 (ENSCATG00000041663) KRTAP4-4 (ENSCATG00000042277) KRTAP4-3 (ENSCATG00000033768) ENSCATG00000021011 ENSCATG00000034203 #13 ENSCATG00000037125 #13 KRTAP3-1 (ENSCATG00000021424) ##14 KRT40 (ENSCATG00000034790) #18 KRT39 (ENSCATG00000036783) #19 KRT23 (ENSCATG00000040372) #20 KRT20 (ENSCATG00000039872) #21 KRT12 (ENSCATG00000039373) #22 ENSCATG00000009301 KRT10 (ENSCATG00000044216) #23 KRT28 (ENSCATG00000013336) #24 KRT27 (ENSCATG00000017114) #25 KRT26 (ENSCATG00000032089) #26 KRT25 (ENSCATG00000032084) #27 KRT24 (ENSCATG00000040299) #28 KRT222 (ENSCATG00000025409) #29 SMARCE1 (ENSCATG00000033223) ##30 CCR7 (ENSCATG00000041409) #31 TNS4 (ENSCATG00000031207) #32 IGFBP4 (ENSCATG00000035081) #33 TOP2A (ENSCATG00000030085) #34 GJD3 (ENSCATG00000021931) RARA (ENSCATG00000044638) #35 Macaca ANCESTRAL SPECIES 4 ENSGT00950000183407 ENSGT00940000163658 #7 ENSGT00940000164459 #8 ENSGT00940000156135.h.f.a #10 ENSGT00940000156135.h.f.b.a.a.b.a #10 ENSGT00940000162736.s.a.a.a ENSGT00940000160443.o.c #13 ENSGT00940000160443.o.d.a #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.d.b #13 ENSGT00390000001157.A.b ##14 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Macaca_a ANCESTRAL SPECIES 4 ENSGT00940000156135.h.f.b.a.a.b.a #10 ENSGT00940000156135.h.f.b.a.a.b.b.b #10 ENSGT00940000163931 #11 ENSGT00940000159486.y.a ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000162736.s.b.a.b ENSGT00940000160443.o.c #13 ENSGT00940000160443.o.d.a #13 ENSGT00940000160443.p #13 ENSGT00940000160443.o.d.b #13 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d.p.a #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Rhesus MODERN SPECIES 7 KRTAP4-1 (ENSMMUG00000065282) KRTAP4-2 (ENSMMUG00000045776) ENSMMUG00000020305 KRTAP4-6 (ENSMMUG00000038207) ENSMMUG00000045996 ENSMMUG00000050719 ENSMMUG00000062533 ENSMMUG00000053239 ENSMMUG00000020301 #13 ENSMMUG00000020299 #13 KRTAP1-4 (ENSMMUG00000020300) #13 KRT40 (ENSMMUG00000001142) #18 KRT39 (ENSMMUG00000001510) #19 KRT23 (ENSMMUG00000001505) #20 KRT20 (ENSMMUG00000001503) #21 KRT12 (ENSMMUG00000001502) #22 ENSMMUG00000043282 KRT10 (ENSMMUG00000001500) #23 KRT28 (ENSMMUG00000001499) #24 KRT27 (ENSMMUG00000001497) #25 KRT26 (ENSMMUG00000001495) #26 KRT25 (ENSMMUG00000001492) #27 KRT24 (ENSMMUG00000023592) #28 KRT222 (ENSMMUG00000004004) #29 SMARCE1 (ENSMMUG00000004005) ##30 CCR7 (ENSMMUG00000002102) #31 TNS4 (ENSMMUG00000009386) #32 IGFBP4 (ENSMMUG00000009384) #33 TOP2A (ENSMMUG00000008941) #34 GJD3 (ENSMMUG00000012489) RARA (ENSMMUG00000012486) #35 Crab-eating macaque MODERN SPECIES 7 ENSMFAG00000034680 #11 KRTAP4-6 (ENSMFAG00000002460) ENSMFAG00000028572 KRTAP4-7 (ENSMFAG00000000596) ENSMFAG00000051497 ENSMFAG00000056804 #13 ENSMFAG00000036831 #13 KRTAP1-4 (ENSMFAG00000001642) #13 ENSMFAG00000046213 #13 KRT40 (ENSMFAG00000044976) #18 ENSMFAG00000052202 KRT39 (ENSMFAG00000033201) #19 ENSMFAG00000060620 KRT23 (ENSMFAG00000038526) #20 KRT20 (ENSMFAG00000003933) #21 KRT12 (ENSMFAG00000003650) #22 ENSMFAG00000016338 KRT10 (ENSMFAG00000038850) #23 KRT28 (ENSMFAG00000040928) #24 KRT27 (ENSMFAG00000039079) #25 KRT26 (ENSMFAG00000001350) #26 KRT25 (ENSMFAG00000037286) #27 KRT24 (ENSMFAG00000039579) #28 KRT222 (ENSMFAG00000035858) #29 ENSMFAG00000042285 #30 CCR7 (ENSMFAG00000032012) #31 TNS4 (ENSMFAG00000001585) #32 IGFBP4 (ENSMFAG00000043180) #33 TOP2A (ENSMFAG00000002270) #34 ENSMFAG00000055548 ENSMFAG00000010310 Pig-tailed macaque MODERN SPECIES 494 ENSMNEG00000033695 KRTAP4-5 (ENSMNEG00000035983) ENSMNEG00000035649 ENSMNEG00000045170 ENSMNEG00000042925 ENSMNEG00000001165 ENSMNEG00000023777 ENSMNEG00000038682 ENSMNEG00000043725 #13 ENSMNEG00000029591 #13 KRTAP3-1 (ENSMNEG00000002270) ##14 KRT40 (ENSMNEG00000040425) #18 KRT39 (ENSMNEG00000045305) #19 KRT23 (ENSMNEG00000042071) #20 KRT20 (ENSMNEG00000029478) #21 KRT12 (ENSMNEG00000004668) #22 ENSMNEG00000032796 KRT10 (ENSMNEG00000035663) #23 KRT28 (ENSMNEG00000045361) #24 KRT27 (ENSMNEG00000028793) #25 KRT26 (ENSMNEG00000044933) #26 KRT25 (ENSMNEG00000035206) #27 KRT24 (ENSMNEG00000043164) #28 KRT222 (ENSMNEG00000040062) #29 SMARCE1 (ENSMNEG00000010025) ##30 CCR7 (ENSMNEG00000030706) #31 TNS4 (ENSMNEG00000040756) #32 IGFBP4 (ENSMNEG00000041735) #33 TOP2A (ENSMNEG00000030734) #34 GJD3 (ENSMNEG00000006880) RARA (ENSMNEG00000029542) #35 Rhinopithecus ANCESTRAL SPECIES 61 ENSGT00940000165435 ENSGT00940000163975 ENSGT00940000159486.z ENSGT00940000154448.b.b.b.b ENSGT00940000159486.y.a ENSGT00940000162736.q ENSGT00940000162736.r ENSGT00940000160443.o.d.a #13 ENSGT00390000001157.A.b ##14 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00390000016445 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.c.b.a.b.a ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 Black snub-nosed monkey MODERN SPECIES 638 ENSRBIG00000038944 #10 ENSRBIG00000036042 #10 ENSRBIG00000033838 #10 KRTAP4-2 (ENSRBIG00000030295) ENSRBIG00000029755 ENSRBIG00000040600 ENSRBIG00000025008 ENSRBIG00000027251 ENSRBIG00000029137 ENSRBIG00000038757 #13 KRTAP3-1 (ENSRBIG00000001148) ##14 KRT40 (ENSRBIG00000033402) #18 KRT39 (ENSRBIG00000031920) #19 KRT23 (ENSRBIG00000029190) #20 KRT20 (ENSRBIG00000039923) #21 KRT12 (ENSRBIG00000028260) #22 ENSRBIG00000033196 KRT10 (ENSRBIG00000042127) #23 KRT28 (ENSRBIG00000018840) #24 KRT27 (ENSRBIG00000041899) #25 KRT26 (ENSRBIG00000036214) #26 KRT25 (ENSRBIG00000044480) #27 KRT24 (ENSRBIG00000044202) #28 ENSRBIG00000036799 #29 SMARCE1 (ENSRBIG00000040707) ##30 CCR7 (ENSRBIG00000036537) #31 TNS4 (ENSRBIG00000032169) #32 IGFBP4 (ENSRBIG00000029579) #33 TOP2A (ENSRBIG00000027893) #34 RARA (ENSRBIG00000029995) #35 CDC6 (ENSRBIG00000042270) #36 Golden snub-nosed monkey MODERN SPECIES 2684 KRT23 (ENSRROG00000032975) #20 KRT20 (ENSRROG00000045233) #21 KRT12 (ENSRROG00000036947) #22 ENSRROG00000034243 KRT10 (ENSRROG00000035060) #23 KRT28 (ENSRROG00000035612) #24 KRT27 (ENSRROG00000041641) #25 KRT26 (ENSRROG00000036051) #26 KRT25 (ENSRROG00000031435) #27 KRT24 (ENSRROG00000010823) #28 KRT222 (ENSRROG00000005797) #29 SMARCE1 (ENSRROG00000028858) ##30 CCR7 (ENSRROG00000038793) #31 TNS4 (ENSRROG00000042906) #32 IGFBP4 (ENSRROG00000033641) #33 TOP2A (ENSRROG00000034836) #34 GJD3 (ENSRROG00000016401) DPH1 (ENSRROG00000027589) Platyrrhini ANCESTRAL SPECIES 1 ENSGT00940000164350.B ENSGT00940000165435 ENSGT00940000163975 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000160443.r.b.a #13 ENSGT00940000160295 #12 ENSGT00940000160443.r.a #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d.p.b #30 ENSGT00940000164415 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Cebidae ANCESTRAL SPECIES 10 ENSGT00940000164350.B ENSGT00940000163975.c ENSGT00940000156135.h.b.b #10 ENSGT00940000165435 ENSGT00940000163975.d ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000162736 ENSGT00940000160443.r.a #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d.p.a #30 ENSGT00940000164415 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a Cebidae_a ANCESTRAL SPECIES 1 ENSGT00940000156135.h.b.a #10 ENSGT00940000164350.B ENSGT00940000163975.c ENSGT00940000156135.h.a.a #10 ENSGT00940000165435 ENSGT00940000163975.d ENSGT00940000154448.b.b.b.b ENSGT00940000162736 ENSGT00940000160443.r.b.a #13 ENSGT00940000160443.r.a #13 ENSGT00390000001157.A.b ##14 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00940000164415 ENSGT00390000003628.b.c.b.a.b ##30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Capuchin MODERN SPECIES 228 ENSCCAG00000034421 #10 ENSCCAG00000020353 #10 ENSCCAG00000035189 #10 ENSCCAG00000026553 ENSCCAG00000030292 ENSCCAG00000030861 ENSCCAG00000022140 ENSCCAG00000024497 ENSCCAG00000017936 #13 ENSCCAG00000021121 #13 ENSCCAG00000022586 #13 KRT40 (ENSCCAG00000032652) #18 KRT39 (ENSCCAG00000029088) #19 KRT23 (ENSCCAG00000030267) #20 KRT20 (ENSCCAG00000032974) #21 KRT12 (ENSCCAG00000032972) #22 KRT10 (ENSCCAG00000036373) #23 KRT28 (ENSCCAG00000037023) #24 KRT27 (ENSCCAG00000009302) #25 KRT26 (ENSCCAG00000022891) #26 KRT25 (ENSCCAG00000025845) #27 KRT24 (ENSCCAG00000037342) #28 KRT222 (ENSCCAG00000032779) #29 ENSCCAG00000021368 SMARCE1 (ENSCCAG00000025244) ##30 CCR7 (ENSCCAG00000024858) #31 TNS4 (ENSCCAG00000032978) #32 IGFBP4 (ENSCCAG00000029322) #33 TOP2A (ENSCCAG00000025939) #34 ENSCCAG00000031517 RARA (ENSCCAG00000021724) #35 Bolivian squirrel monkey MODERN SPECIES 208 ENSSBOG00000024889 #10 ENSSBOG00000028255 #10 ENSSBOG00000031036 ENSSBOG00000026326 KRTAP4-5 (ENSSBOG00000024832) ENSSBOG00000003071 ENSSBOG00000031693 ENSSBOG00000031937 #13 ENSSBOG00000032989 #13 ENSSBOG00000001195 #13 KRTAP3-1 (ENSSBOG00000021282) ##14 KRT40 (ENSSBOG00000033336) #18 KRT39 (ENSSBOG00000023156) #19 KRT23 (ENSSBOG00000029946) #20 KRT20 (ENSSBOG00000020042) #21 KRT12 (ENSSBOG00000020046) #22 KRT10 (ENSSBOG00000034537) #23 KRT28 (ENSSBOG00000033194) #24 KRT26 (ENSSBOG00000031304) #26 KRT24 (ENSSBOG00000020285) #28 KRT222 (ENSSBOG00000035572) #29 SMARCE1 (ENSSBOG00000001180) ##30 CCR7 (ENSSBOG00000028714) #31 TNS4 (ENSSBOG00000034575) #32 IGFBP4 (ENSSBOG00000022228) #33 TOP2A (ENSSBOG00000016584) #34 ENSSBOG00000028183 RARA (ENSSBOG00000034538) #35 CDC6 (ENSSBOG00000013277) #36 WIPF2 (ENSSBOG00000029118) #37 RAPGEFL1 (ENSSBOG00000029673) Marmoset MODERN SPECIES 17 ENSCJAG00000067750 KRTAP4-12 (ENSCJAG00000069967) ENSCJAG00000082655 ENSCJAG00000081670 ENSCJAG00000080141 ENSCJAG00000074243 ENSCJAG00000083167 #13 ENSCJAG00000038794 #13 KRTAP3-1 (ENSCJAG00000044200) ##14 ENSCJAG00000076427 #16 ENSCJAG00000079566 #16 KRT40 (ENSCJAG00000013706) #18 KRT39 (ENSCJAG00000013697) #19 ENSCJAG00000013664 #24 KRT20 (ENSCJAG00000013679) #21 KRT12 (ENSCJAG00000013609) #22 KRT10 (ENSCJAG00000044765) #23 KRT24 (ENSCJAG00000034830) #28 KRT222 (ENSCJAG00000035627) #29 ENSCJAG00000013573 #30 CCR7 (ENSCJAG00000075739) #31 TNS4 (ENSCJAG00000013560) #32 IGFBP4 (ENSCJAG00000013550) #33 TOP2A (ENSCJAG00000013478) #34 ENSCJAG00000065689 GJD3 (ENSCJAG00000046154) RARA (ENSCJAG00000013440) #35 CDC6 (ENSCJAG00000011073) #36 ENSCJAG00000081240 ENSCJAG00000031546 TEX14 (ENSCJAG00000073487) Mas night monkey MODERN SPECIES 481 KRTAP4-7 (ENSANAG00000028643) ENSANAG00000033154 ENSANAG00000019385 #13 ENSANAG00000030978 #12 ENSANAG00000031799 #13 KRTAP3-1 (ENSANAG00000014505) ##14 KRT40 (ENSANAG00000031905) #18 KRT39 (ENSANAG00000037576) #19 KRT23 (ENSANAG00000033242) #20 KRT20 (ENSANAG00000037651) #21 KRT12 (ENSANAG00000031208) #22 KRT10 (ENSANAG00000032560) #23 KRT28 (ENSANAG00000037757) #24 KRT27 (ENSANAG00000032615) #25 KRT26 (ENSANAG00000022112) #26 KRT25 (ENSANAG00000027137) #27 KRT24 (ENSANAG00000037902) #28 KRT222 (ENSANAG00000023560) #29 ENSANAG00000032353 #30 CCR7 (ENSANAG00000021558) #31 TNS4 (ENSANAG00000036996) #32 IGFBP4 (ENSANAG00000002213) #33 TOP2A (ENSANAG00000025180) #34 ENSANAG00000026269 RARA (ENSANAG00000038222) #35 CDC6 (ENSANAG00000030612) #36 Tarsier MODERN SPECIES 3915 KRT40 (ENSTSYG00000011333) #18 KRT39 (ENSTSYG00000008675) #19 KRT23 (ENSTSYG00000006431) #20 KRT20 (ENSTSYG00000011001) #21 KRT12 (ENSTSYG00000010990) #22 KRT10 (ENSTSYG00000009031) #23 KRT28 (ENSTSYG00000007469) #24 KRT27 (ENSTSYG00000007457) #25 KRT26 (ENSTSYG00000011414) #26 KRT25 (ENSTSYG00000009548) #27 ENSTSYG00000030238 KRT222 (ENSTSYG00000030456) #29 SMARCE1 (ENSTSYG00000012496) #30 CCR7 (ENSTSYG00000028282) #31 Strepsirrhini ANCESTRAL SPECIES 4 ENSGT00940000156135 #10 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000160295 #12 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Lemuriformes ANCESTRAL SPECIES 2 ENSGT00940000163416 ENSGT00940000164263 ENSGT00940000154448.b.b.b.b ENSGT00940000159486 ENSGT00940000163975 ENSGT00940000162736 ENSGT00940000155433 ENSGT00940000160443 #13 ENSGT00390000001157.A.b ##14 ENSGT00940000160295 #12 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000155258.t ENSGT00940000154403.a.a ENSGT00950000183311 ENSGT00940000161311 ENSGT00940000161787 ENSGT00940000161991 ENSGT00940000163444 ENSGT00940000162088 ENSGT00940000153980.i.a ENSGT00940000163426 ENSGT00390000001157.C #16 ENSGT00940000161968 #18 ENSGT00940000162203 #19 ENSGT00940000161077 #20 ENSGT00940000161855 #21 ENSGT00940000159382 #22 ENSGT00940000160849 #23 ENSGT00940000162192 #24 ENSGT00940000161982 #25 ENSGT00940000161950 #26 ENSGT00940000161994 #27 ENSGT00940000161783 #28 ENSGT00940000159655 #29 ENSGT00390000003628.b.d #30 ENSGT01030000234667.a.a.a.a.b #31 ENSGT00940000160142 #32 ENSGT00940000159647 #33 ENSGT00940000157539 #34 ENSGT01090000260005.a.b.a.a ENSGT00940000159997 #35 ENSGT00530000063498.A #36 Coquerels sifaka MODERN SPECIES 120 KRTAP29-1 (ENSPCOG00000019509) #8 ENSPCOG00000013137 #10 ENSPCOG00000022603 ENSPCOG00000017090 ENSPCOG00000026553 ENSPCOG00000014377 ENSPCOG00000021181 ENSPCOG00000014598 ENSPCOG00000012200 ENSPCOG00000015985 #12 ENSPCOG00000004823 #12 KRT40 (ENSPCOG00000017920) #18 KRT39 (ENSPCOG00000024190) #19 KRT23 (ENSPCOG00000015929) #20 KRT20 (ENSPCOG00000019180) #21 KRT12 (ENSPCOG00000013217) #22 ENSPCOG00000023362 KRT10 (ENSPCOG00000018225) #23 KRT28 (ENSPCOG00000025536) #24 KRT27 (ENSPCOG00000023758) #25 KRT26 (ENSPCOG00000025920) #26 KRT25 (ENSPCOG00000016980) #27 KRT24 (ENSPCOG00000018519) #28 KRT222 (ENSPCOG00000027280) #29 ENSPCOG00000013727 #30 CCR7 (ENSPCOG00000016602) #31 TNS4 (ENSPCOG00000024055) #32 IGFBP4 (ENSPCOG00000013262) #33 TOP2A (ENSPCOG00000025407) #34 RARA (ENSPCOG00000024070) #35 CDC6 (ENSPCOG00000027397) #36 Greater bamboo lemur MODERN SPECIES 1733 ENSPSMG00000010522 #16 KRT40 (ENSPSMG00000010509) #18 KRT39 (ENSPSMG00000010491) #19 KRT23 (ENSPSMG00000010479) #20 KRT20 (ENSPSMG00000010469) #21 KRT12 (ENSPSMG00000010461) #22 KRT10 (ENSPSMG00000010450) #23 KRT28 (ENSPSMG00000010434) #24 KRT27 (ENSPSMG00000010420) #25 ENSPSMG00000010390 #26 Mouse lemur MODERN SPECIES 7 ENSMICG00000043010 #10 ENSMICG00000034211 #10 ENSMICG00000046956 #10 ENSMICG00000007150 #10 ENSMICG00000046748 ENSMICG00000034773 ENSMICG00000007164 ENSMICG00000046104 KRTAP4-3 (ENSMICG00000007155) ENSMICG00000047933 ENSMICG00000037682 #13 KRT40 (ENSMICG00000009912) #18 KRT39 (ENSMICG00000009899) #19 KRT23 (ENSMICG00000009894) #20 KRT20 (ENSMICG00000035159) #21 KRT12 (ENSMICG00000009875) #22 KRT10 (ENSMICG00000032358) #23 KRT28 (ENSMICG00000009865) #24 KRT27 (ENSMICG00000009856) #25 KRT26 (ENSMICG00000009852) #26 KRT25 (ENSMICG00000027114) #27 KRT24 (ENSMICG00000009839) #28 KRT222 (ENSMICG00000032628) #29 ENSMICG00000009821 #30 CCR7 (ENSMICG00000028152) #31 TNS4 (ENSMICG00000009811) #32 IGFBP4 (ENSMICG00000009809) #33 TOP2A (ENSMICG00000009772) #34 RARA (ENSMICG00000029502) #35 CDC6 (ENSMICG00000045842) #36 WIPF2 (ENSMICG00000033471) #37 Bushbaby MODERN SPECIES 133 ENSOGAG00000031966 ENSOGAG00000011446 ENSOGAG00000034704 ENSOGAG00000003105 #10 KRTAP4-5 (ENSOGAG00000003102) ENSOGAG00000034870 ENSOGAG00000025341 ENSOGAG00000024366 KRTAP3-1 (ENSOGAG00000003088) ##14 ENSOGAG00000026860 #16 ENSOGAG00000024415 #16 KRT40 (ENSOGAG00000003085) #18 KRT39 (ENSOGAG00000003083) #19 KRT23 (ENSOGAG00000003082) #20 KRT20 (ENSOGAG00000003079) #21 KRT12 (ENSOGAG00000003076) #22 KRT10 (ENSOGAG00000003075) #23 KRT28 (ENSOGAG00000003074) #24 KRT27 (ENSOGAG00000003073) #25 KRT26 (ENSOGAG00000003070) #26 KRT25 (ENSOGAG00000003068) #27 KRT24 (ENSOGAG00000014264) #28 KRT222 (ENSOGAG00000024213) #29 ENSOGAG00000001652 #30 CCR7 (ENSOGAG00000001650) #31 TNS4 (ENSOGAG00000001646) #32 IGFBP4 (ENSOGAG00000001644) #33 TOP2A (ENSOGAG00000001638) #34 GJD3 (ENSOGAG00000028723) RARA (ENSOGAG00000024257) #35 CDC6 (ENSOGAG00000008542) #36