Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00390000010777	ENSGT00390000006088 #7	ENSGT00390000004984 #8	ENSGT00940000159081 #9	ENSGT00900000143266	ENSGT00950000182885.B #11	ENSGT00940000162483 #13	ENSGT00390000015477 #14	ENSGT00940000156566 #15	ENSGT00940000158637 #16	ENSGT00530000064216 #17	ENSGT01020000230401.b.a #18	ENSGT00390000007685 #19	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00390000010777	ENSGT00390000006088 #7	ENSGT00390000004984 #8	ENSGT00940000159081 #9	ENSGT00900000143266	ENSGT00950000182885.B #11	ENSGT00940000162483 #13	ENSGT00390000015477 #14	ENSGT00940000156566 #15	ENSGT00940000158637 #16	ENSGT00530000064216 #17	ENSGT01020000230401.b.a #18	ENSGT00390000007685 #19	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Muroidea	ANCESTRAL SPECIES	5	ENSGT00390000010777	ENSGT00390000006088 #7	ENSGT00390000004984 #8	ENSGT00940000159081 #9	ENSGT00900000143266	ENSGT00950000182885.B #11	ENSGT00940000162483 #13	ENSGT00390000015477 #14	ENSGT00940000156566 #15	ENSGT00940000158637 #16	ENSGT00530000064216 #17	ENSGT01020000230401.b.a #18	ENSGT00390000007685 #19	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00390000010777	ENSGT00390000006088 #7	ENSGT00390000004984 #8	ENSGT00940000159081 #9	ENSGT00900000143266	ENSGT00950000182885.B #11	ENSGT00940000162483 #13	ENSGT00390000015477 #14	ENSGT00940000156566 #15	ENSGT00940000158637 #16	ENSGT00530000064216 #17	ENSGT01020000230401.b.a #18	ENSGT00390000007685 #19	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00390000010777	ENSGT00390000006088 #7	ENSGT00390000004984 #8	ENSGT00940000159081 #9	ENSGT00900000143266	ENSGT00950000182885.B #11	ENSGT00940000162483 #13	ENSGT00390000015477 #14	ENSGT00940000156566 #15	ENSGT00940000158637 #16	ENSGT00530000064216 #17	ENSGT01020000230401.b.a #18	ENSGT00390000007685 #19	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00390000014084	ENSGT00390000010777	ENSGT00390000006088 #7	ENSGT00390000004984 #8	ENSGT00940000159081 #9	ENSGT00950000182885.B #11	ENSGT00940000162483 #13	ENSGT00390000015477 #14	ENSGT00940000156566 #15	ENSGT00940000158637 #16	ENSGT00530000064216 #17	ENSGT01020000230401.b.a #18	ENSGT00390000007685 #19	ENSGT00390000000987.e #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a	ENSGT00390000014700.a
Golden Hamster	MODERN SPECIES	628	Parpbp (ENSMAUG00000006327) #7	Pmch (ENSMAUG00000014017) #8	Igf1 (ENSMAUG00000020849) #9	ENSMAUG00000014392 #10	Pah (ENSMAUG00000018432) #11	ENSMAUG00000013802 #12	Ascl1 (ENSMAUG00000020431) #13	1700113H08Rik (ENSMAUG00000020449) #14	Stab2 (ENSMAUG00000015034) #15	Nt5dc3 (ENSMAUG00000007322) #16	Ttc41 (ENSMAUG00000011319) #17	Hsp90b1 (ENSMAUG00000019521) #18	ENSMAUG00000000988 #19	ENSMAUG00000012886 #20	Glt8d2 (ENSMAUG00000011541) #21	Hcfc2 (ENSMAUG00000015365) #22	Nfyb (ENSMAUG00000020756) #23
Chinese hamster chok1gshd	MODERN SPECIES	83	Nup37 (ENSCGRG00001017394)	Pmch (ENSCGRG00001016652) #8	Parpbp (ENSCGRG00001016323) #7	ENSCGRG00001009416	Igf1 (ENSCGRG00001024335) #9	Pah (ENSCGRG00001019844) #11	Ascl1 (ENSCGRG00001020607) #13	1700113H08Rik (ENSCGRG00001016986) #14	Stab2 (ENSCGRG00001023839) #15	Nt5dc3 (ENSCGRG00001017505) #16	Ttc41 (ENSCGRG00001013895) #17	Hsp90b1 (ENSCGRG00001023543) #18	ENSCGRG00001021751 #19	ENSCGRG00001005837 #20	Glt8d2 (ENSCGRG00001011058) #21	Hcfc2 (ENSCGRG00001023298) #22	Nfyb (ENSCGRG00001018886) #23	Txnrd1 (ENSCGRG00001015703)	Chst11 (ENSCGRG00001011741)	Slc41a2 (ENSCGRG00001007519)	Nopchap1 (ENSCGRG00001023760)	Aldh1l2 (ENSCGRG00001012721)	Washc4 (ENSCGRG00001003532)	Appl2 (ENSCGRG00001020927)	1500009L16Rik (ENSCGRG00001020442)	Nuak1 (ENSCGRG00001020114)	Ckap4 (ENSCGRG00001019354)	Tcp11l2 (ENSCGRG00001018969)	Polr3b (ENSCGRG00001013651)	Rfx4 (ENSCGRG00001000120)	Ric8b (ENSCGRG00001016604)
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00390000010777	ENSGT00390000006088 #7	ENSGT00390000004984 #8	ENSGT00940000159081 #9	ENSGT00900000143266	ENSGT00950000182885.B #11	ENSGT00940000162483 #13	ENSGT00390000015477 #14	ENSGT00940000156566 #15	ENSGT00940000158637 #16	ENSGT00530000064216 #17	ENSGT01020000230401.b.a #18	ENSGT00390000007685 #19	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Northern American deer mouse	MODERN SPECIES	9	Nup37 (ENSPEMG00000022470)	Parpbp (ENSPEMG00000020605) #7	Pmch (ENSPEMG00000025564) #8	Igf1 (ENSPEMG00000020617) #9	Pah (ENSPEMG00000020713) #11	Ascl1 (ENSPEMG00000021891) #13	1700113H08Rik (ENSPEMG00000020964) #14	ENSPEMG00000026704	Stab2 (ENSPEMG00000020820) #15	ENSPEMG00000022680 #16	ENSPEMG00000001891 #17	Hsp90b1 (ENSPEMG00000022761) #18	ENSPEMG00000026334 #19	ENSPEMG00000018746 #20	Glt8d2 (ENSPEMG00000022887) #21	Hcfc2 (ENSPEMG00000021614) #22	Nfyb (ENSPEMG00000021796) #23	Eid3 (ENSPEMG00000006889)	Txnrd1 (ENSPEMG00000022696)	Chst11 (ENSPEMG00000024030)	Slc41a2 (ENSPEMG00000021516)	Nopchap1 (ENSPEMG00000028405)	ENSPEMG00000028478	ENSPEMG00000027481	ENSPEMG00000029316	Timp3 (ENSPEMG00000026474)	Syn3 (ENSPEMG00000019748)	Fbxo7 (ENSPEMG00000019506)	ENSPEMG00000027071	Rtcb (ENSPEMG00000019548)	Ascl4 (ENSPEMG00000024863)
Prairie vole	MODERN SPECIES	10	Nup37 (ENSMOCG00000019382)	Parpbp (ENSMOCG00000005485) #7	Pmch (ENSMOCG00000012390) #8	Igf1 (ENSMOCG00000017765) #9	ENSMOCG00000020953	ENSMOCG00000005982 #11	Ascl1 (ENSMOCG00000014507) #13	1700113H08Rik (ENSMOCG00000014753) #14	Stab2 (ENSMOCG00000010615) #15	Nt5dc3 (ENSMOCG00000003821) #16	Ttc41 (ENSMOCG00000012760) #17	Hsp90b1 (ENSMOCG00000006898) #18	ENSMOCG00000014043 #19	Tdg (ENSMOCG00000010304) #20	Glt8d2 (ENSMOCG00000018691) #21	Hcfc2 (ENSMOCG00000005236) #22	Nfyb (ENSMOCG00000001259) #23	Txnrd1 (ENSMOCG00000014410)	Chst11 (ENSMOCG00000000357)	Slc41a2 (ENSMOCG00000003715)	Nopchap1 (ENSMOCG00000018282)	Aldh1l2 (ENSMOCG00000006729)	Washc4 (ENSMOCG00000004913)	Appl2 (ENSMOCG00000005125)	1500009L16Rik (ENSMOCG00000009836)	Nuak1 (ENSMOCG00000018296)	ENSMOCG00000020446	Ckap4 (ENSMOCG00000008164)	ENSMOCG00000013616	Tcp11l2 (ENSMOCG00000015571)	Polr3b (ENSMOCG00000022129)
Murinae	ANCESTRAL SPECIES	22	ENSGT00390000014084	ENSGT00390000010777	ENSGT00390000006088 #7	ENSGT00390000004984 #8	ENSGT00940000159081 #9	ENSGT00950000182885.B #11	ENSGT00940000162483 #13	ENSGT00390000015477 #14	ENSGT00940000156566 #15	ENSGT00940000158637 #16	ENSGT00530000064216 #17	ENSGT01020000230401.b.a #18	ENSGT00390000007685 #19	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Mus	ANCESTRAL SPECIES	23													ENSGT00390000007685 #19	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Mus_A	ANCESTRAL SPECIES	11	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.a	ENSGT00940000162830	ENSGT00940000160088	ENSGT00940000159237	ENSGT00940000153805.q.a.a.b.a.b	ENSGT00940000153805.q.a.a.b.a.a.a	ENSGT00940000153805.q.a.a.a	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.a.a.b	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b	ENSGT00940000173873	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Mus_B	ANCESTRAL SPECIES	10	ENSGT01030000234519.e.a.a.b.a.a.a	ENSGT00940000162830	ENSGT00940000160088	ENSGT00940000159237	ENSGT00940000153805.q.a.a.b.a.b	ENSGT00940000153805.q.a.a.b.a.a.a	ENSGT00940000153805.q.a.a.a	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.a.a.b	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b	ENSGT00700000104587	ENSGT00860000135672	ENSGT00940000173873	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00610000087444	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a
Mouse	MODERN SPECIES	1	Zfp433 (ENSMUSG00000096795)	Gm3055 (ENSMUSG00000094622)	Gm4767 (ENSMUSG00000094076)	Gm32687 (ENSMUSG00000112640)	Zfp781 (ENSMUSG00000096718)	Zfp873 (ENSMUSG00000061371)	BC024063 (ENSMUSG00000112160)	AU041133 (ENSMUSG00000078435)	Zfp938 (ENSMUSG00000062931)	4932415D10Rik (ENSMUSG00000044581)	Gm4924 (ENSMUSG00000073427)	Gm1553 (ENSMUSG00000094186)	Uqcc6 (ENSMUSG00000063320)	Tdg (ENSMUSG00000034674) #20	Glt8d2 (ENSMUSG00000020251) #21	Hcfc2 (ENSMUSG00000020246) #22	Nfyb (ENSMUSG00000020248) #23	Txnrd1 (ENSMUSG00000020250)	Eid3 (ENSMUSG00000109864)	Chst11 (ENSMUSG00000034612)	Slc41a2 (ENSMUSG00000034591)	Nopchap1 (ENSMUSG00000020255)	Aldh1l2 (ENSMUSG00000020256)	Washc4 (ENSMUSG00000034560)	Appl2 (ENSMUSG00000020263)	1500009L16Rik (ENSMUSG00000087651)	Nuak1 (ENSMUSG00000020032)	Ckap4 (ENSMUSG00000046841)	Tcp11l2 (ENSMUSG00000020034)	Polr3b (ENSMUSG00000034453)	Rfx4 (ENSMUSG00000020037)
Mus_C	ANCESTRAL SPECIES	7	ENSGT01030000234519.e.a.a.b.a.a.a	ENSGT00940000162830	ENSGT00940000160088	ENSGT00940000159237	ENSGT00940000153805.q.a.a.b.a.b	ENSGT00940000153805.q.a.a.b.a.a.a	ENSGT00940000153805.q.a.a.a	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.a.a.b	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b	ENSGT00700000104587	ENSGT00860000135672	ENSGT00390000007685 #19	ENSGT00390000000987 #20	ENSGT00940000158078 #21	ENSGT00940000160733 #22	ENSGT00940000154917 #23	ENSGT00940000165197	ENSGT00940000160180	ENSGT00940000159167	ENSGT00950000183042.a.b	ENSGT00390000000376	ENSGT00940000158018	ENSGT00390000002524	ENSGT00940000158319	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a	ENSGT00390000014700.a
spretus	MODERN SPECIES	1	Tle2 (MGP_SPRETEiJ_G0016467)	Tle6 (MGP_SPRETEiJ_G0016468)	BC025920 (MGP_SPRETEiJ_G0016469)	Sirt6 (MGP_SPRETEiJ_G0016470)	Ankrd24 (MGP_SPRETEiJ_G0016471)	MGP_SPRETEiJ_G0016472	MGP_SPRETEiJ_G0016473	Zfp873 (MGP_SPRETEiJ_G0016474)	MGP_SPRETEiJ_G0016475	AU041133 (MGP_SPRETEiJ_G0016476)	Zfp938 (MGP_SPRETEiJ_G0016477)	MGP_SPRETEiJ_G0016478	Gm1553 (MGP_SPRETEiJ_G0016479)	Tdg (MGP_SPRETEiJ_G0016480) #20	Glt8d2 (MGP_SPRETEiJ_G0016481) #21	Hcfc2 (MGP_SPRETEiJ_G0016482) #22	Nfyb (MGP_SPRETEiJ_G0016483) #23	MGP_SPRETEiJ_G0016484	MGP_SPRETEiJ_G0016485	Chst11 (MGP_SPRETEiJ_G0016486)	MGP_SPRETEiJ_G0016487	Nopchap1 (MGP_SPRETEiJ_G0016488)	Aldh1l2 (MGP_SPRETEiJ_G0016489)	Washc4 (MGP_SPRETEiJ_G0016490)	Appl2 (MGP_SPRETEiJ_G0016491)	MGP_SPRETEiJ_G0016492	Ckap4 (MGP_SPRETEiJ_G0016493)	Tcp11l2 (MGP_SPRETEiJ_G0016494)	Polr3b (MGP_SPRETEiJ_G0016495)	Rfx4 (MGP_SPRETEiJ_G0016496)	Ric8b (MGP_SPRETEiJ_G0016497)
Steppe mouse	MODERN SPECIES	2812												Gm1553 (ENSMSIG00000002299)	ENSMSIG00000002249 #19	Tdg (ENSMSIG00000002206) #20	Glt8d2 (ENSMSIG00000002052) #21	Hcfc2 (ENSMSIG00000002022) #22	Nfyb (ENSMSIG00000001965) #23	Eid3 (ENSMSIG00000001954)	Txnrd1 (ENSMSIG00000001787)	Chst11 (ENSMSIG00000001727)	Slc41a2 (ENSMSIG00000001663)	Nopchap1 (ENSMSIG00000001635)	Aldh1l2 (ENSMSIG00000001571)	Washc4 (ENSMSIG00000001421)	Appl2 (ENSMSIG00000001340)
Ryukyu mouse	MODERN SPECIES	1	Tle2 (MGP_CAROLIEiJ_G0015649)	MGP_CAROLIEiJ_G0015650	BC025920 (MGP_CAROLIEiJ_G0015651)	Sirt6 (MGP_CAROLIEiJ_G0015652)	Ankrd24 (MGP_CAROLIEiJ_G0015653)	MGP_CAROLIEiJ_G0015654	MGP_CAROLIEiJ_G0015655	Zfp873 (MGP_CAROLIEiJ_G0015656)	MGP_CAROLIEiJ_G0015657	AU041133 (MGP_CAROLIEiJ_G0015658)	Zfp938 (MGP_CAROLIEiJ_G0015659)	MGP_CAROLIEiJ_G0015660	MGP_CAROLIEiJ_G0015661 #19	Tdg (MGP_CAROLIEiJ_G0015662) #20	Glt8d2 (MGP_CAROLIEiJ_G0015663) #21	Hcfc2 (MGP_CAROLIEiJ_G0015664) #22	Nfyb (MGP_CAROLIEiJ_G0015665) #23	Txnrd1 (MGP_CAROLIEiJ_G0015666)	Chst11 (MGP_CAROLIEiJ_G0015667)	MGP_CAROLIEiJ_G0015668	Nopchap1 (MGP_CAROLIEiJ_G0015669)	Aldh1l2 (MGP_CAROLIEiJ_G0015670)	Washc4 (MGP_CAROLIEiJ_G0015671)	Appl2 (MGP_CAROLIEiJ_G0015672)	1500009L16Rik (MGP_CAROLIEiJ_G0015673)	Nuak1 (MGP_CAROLIEiJ_G0015674)	Ckap4 (MGP_CAROLIEiJ_G0015675)	Tcp11l2 (MGP_CAROLIEiJ_G0015676)	Polr3b (MGP_CAROLIEiJ_G0015677)	Rfx4 (MGP_CAROLIEiJ_G0015678)	Ric8b (MGP_CAROLIEiJ_G0015679)
Shrew mouse	MODERN SPECIES	22													MGP_PahariEiJ_G0031423 #19	Tdg (MGP_PahariEiJ_G0031422) #20	Glt8d2 (MGP_PahariEiJ_G0031421) #21	Hcfc2 (MGP_PahariEiJ_G0031420) #22	Nfyb (MGP_PahariEiJ_G0031419) #23	MGP_PahariEiJ_G0031418	Chst11 (MGP_PahariEiJ_G0031417)	MGP_PahariEiJ_G0031416	Nopchap1 (MGP_PahariEiJ_G0031415)	Aldh1l2 (MGP_PahariEiJ_G0031414)	Washc4 (MGP_PahariEiJ_G0031413)	Appl2 (MGP_PahariEiJ_G0031412)	1500009L16Rik (MGP_PahariEiJ_G0031411)	Nuak1 (MGP_PahariEiJ_G0031410)	Ckap4 (MGP_PahariEiJ_G0031409)	Tcp11l2 (MGP_PahariEiJ_G0031408)	Polr3b (MGP_PahariEiJ_G0031407)	Rfx4 (MGP_PahariEiJ_G0031406)	Ric8b (MGP_PahariEiJ_G0031405)
Rat	MODERN SPECIES	17	Nup37 (ENSRNOG00000004727)	Pmch (ENSRNOG00000066777) #8	Parpbp (ENSRNOG00000004682) #7	Igf1 (ENSRNOG00000004517) #9	Pah (ENSRNOG00000004302) #11	Ascl1 (ENSRNOG00000004294) #13	RGD1560034 (ENSRNOG00000038943) #14	LOC102550284 (ENSRNOG00000053843)	Stab2 (ENSRNOG00000038948) #15	Nt5dc3 (ENSRNOG00000026793) #16	Ttc41 (ENSRNOG00000026807) #17	Hsp90b1 (ENSRNOG00000026963) #18	Uqcc6 (ENSRNOG00000026982) #19	Tdg (ENSRNOG00000027124) #20	Glt8d2 (ENSRNOG00000033579) #21	Hcfc2 (ENSRNOG00000053510) #22	Nfyb (ENSRNOG00000010309) #23	Txnrd1 (ENSRNOG00000009088)	Chst11 (ENSRNOG00000008885)	Slc41a2 (ENSRNOG00000008713)	Nopchap1 (ENSRNOG00000008696)	AABR07056470.1 (ENSRNOG00000058647)	ENSRNOG00000067407	ENSRNOG00000066910	Aldh1l2 (ENSRNOG00000008586)	Washc4 (ENSRNOG00000008331)	Appl2 (ENSRNOG00000008174)	LOC100910996 (ENSRNOG00000060879)	Nuak1 (ENSRNOG00000008061)	Ckap4 (ENSRNOG00000008016)	Tcp11l2 (ENSRNOG00000007587)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1224										Stab2 (ENSNGAG00000001493) #15	Nt5dc3 (ENSNGAG00000018361) #16	Hsp90b1 (ENSNGAG00000014447) #18	ENSNGAG00000013621 #19	Tdg (ENSNGAG00000000667) #20	Glt8d2 (ENSNGAG00000002040) #21	Hcfc2 (ENSNGAG00000019076) #22	Nfyb (ENSNGAG00000017224) #23	Eid3 (ENSNGAG00000019100)	ENSNGAG00000019222	Chst11 (ENSNGAG00000017327)	ENSNGAG00000015399	Slc41a2 (ENSNGAG00000013889)	Nopchap1 (ENSNGAG00000012316)	Aldh1l2 (ENSNGAG00000020174)	ENSNGAG00000019266	Washc4 (ENSNGAG00000015936)	ENSNGAG00000014686	1500009L16Rik (ENSNGAG00000013967)	Nuak1 (ENSNGAG00000011987)	Ckap4 (ENSNGAG00000015103)	Tcp11l2 (ENSNGAG00000012830)
Lesser Egyptian jerboa	MODERN SPECIES	42	Dram1 (ENSJJAG00000023953)	Washc3 (ENSJJAG00000019930)	Nup37 (ENSJJAG00000018864)	ENSJJAG00000021125 #7	Pmch (ENSJJAG00000021592) #8	ENSJJAG00000019988 #9	Pah (ENSJJAG00000017337) #11	Ascl1 (ENSJJAG00000016132) #13	ENSJJAG00000018477	Stab2 (ENSJJAG00000015484) #15	Nt5dc3 (ENSJJAG00000017888) #16	Ttc41 (ENSJJAG00000009462) #17	Hsp90b1 (ENSJJAG00000020393) #18	ENSJJAG00000022782 #20	Glt8d2 (ENSJJAG00000017860) #21	Hcfc2 (ENSJJAG00000019901) #22	ENSJJAG00000021684 #23	Eid3 (ENSJJAG00000004838)	Txnrd1 (ENSJJAG00000011665)	Chst11 (ENSJJAG00000021100)	Slc41a2 (ENSJJAG00000020225)	Nopchap1 (ENSJJAG00000021635)	Aldh1l2 (ENSJJAG00000014933)	Washc4 (ENSJJAG00000019116)	ENSJJAG00000020572	ENSJJAG00000021110	ENSJJAG00000023283	Nuak1 (ENSJJAG00000020827)	Ckap4 (ENSJJAG00000006487)	Tcp11l2 (ENSJJAG00000002081)	Polr3b (ENSJJAG00000022575)
Kangaroo rat	MODERN SPECIES	322	Washc3 (ENSDORG00000029910)	Nup37 (ENSDORG00000002780)	ENSDORG00000026954 #7	Pmch (ENSDORG00000029881) #8	ENSDORG00000023498	Igf1 (ENSDORG00000000240) #9	ENSDORG00000028455	ENSDORG00000000611 #11	Stab2 (ENSDORG00000014881) #15	Nt5dc3 (ENSDORG00000014885) #16	Ttc41 (ENSDORG00000027656) #17	Hsp90b1 (ENSDORG00000005546) #18	ENSDORG00000024851 #19	Tdg (ENSDORG00000005552) #20	Glt8d2 (ENSDORG00000005554) #21	Hcfc2 (ENSDORG00000001029) #22	Nfyb (ENSDORG00000023975) #23	Txnrd1 (ENSDORG00000028321)	Chst11 (ENSDORG00000013660)	Slc41a2 (ENSDORG00000013661)	Nopchap1 (ENSDORG00000025203)	Aldh1l2 (ENSDORG00000007732)	Washc4 (ENSDORG00000004754)	Appl2 (ENSDORG00000004755)	1500009L16Rik (ENSDORG00000028465)	Nuak1 (ENSDORG00000014495)	Ckap4 (ENSDORG00000005693)	ENSDORG00000013342	Polr3b (ENSDORG00000013345)	Rfx4 (ENSDORG00000003959)	Ric8b (ENSDORG00000003964)