Muroidea_A	ANCESTRAL SPECIES	14	ENSGT00390000003057 #8	ENSGT00940000156776 #9	ENSGT00390000014429.b #10	ENSGT00530000063808.b #11	ENSGT00390000007134 #12	ENSGT00390000011492 #13	ENSGT00390000001775.B #14	ENSGT00390000000950.c.b #15	ENSGT00940000163804 #16	ENSGT00390000015073 #17	ENSGT01020000230354.A.b #18	ENSGT00390000011228.b.b #19	ENSGT00390000007160.a.b #20	ENSGT00940000163231	ENSGT00940000156380 #21	ENSGT00940000156788 #22	ENSGT00940000157779 #23	ENSGT00390000013550 #24	ENSGT00390000015518 #25	ENSGT00940000161184 #26	ENSGT00390000007526 #27	ENSGT00390000017837.b #28	ENSGT00950000183184.a.b #29	ENSGT00940000156737	ENSGT00940000155958	ENSGT00390000006960	ENSGT00940000161639	ENSGT00940000158676	ENSGT00940000155299.A	ENSGT00390000016416	ENSGT00940000156146
Murinae	ANCESTRAL SPECIES	27	ENSGT00390000003057 #8	ENSGT00940000156776 #9	ENSGT00390000014429.b #10	ENSGT00530000063808.b #11	ENSGT00390000007134 #12	ENSGT00390000011492 #13	ENSGT00390000001775.B #14	ENSGT00390000000950.c.b #15	ENSGT00940000163804 #16	ENSGT00390000015073 #17	ENSGT01020000230354.A.b #18	ENSGT00390000011228.b.b #19	ENSGT00390000007160.a.b #20	ENSGT00940000163231	ENSGT00940000156380 #21	ENSGT00940000156788 #22	ENSGT00940000157779 #23	ENSGT00390000013550 #24	ENSGT00390000015518 #25	ENSGT00940000161184 #26	ENSGT00390000007526 #27	ENSGT00390000017837.b #28	ENSGT00950000183184.a.b #29	ENSGT00940000156737	ENSGT00940000155958	ENSGT00390000006960	ENSGT00940000161639	ENSGT00940000158676	ENSGT00940000155299.A	ENSGT00390000016416	ENSGT00940000156146
Mus	ANCESTRAL SPECIES	18	ENSGT00390000003057 #8	ENSGT00940000156776 #9	ENSGT00390000014429.b #10	ENSGT00530000063808.b #11	ENSGT00390000007134 #12	ENSGT00390000011492 #13	ENSGT00390000001775.B #14	ENSGT00390000000950.c.b #15	ENSGT00940000163804 #16	ENSGT00390000015073 #17	ENSGT01020000230354.A.b #18	ENSGT00390000011228.b.b #19	ENSGT00390000007160.a.b #20	ENSGT00940000163231	ENSGT00940000156380 #21	ENSGT00940000156788 #22	ENSGT00940000157779 #23	ENSGT00390000013550 #24	ENSGT00390000015518 #25	ENSGT00940000161184 #26	ENSGT00390000007526 #27	ENSGT00390000017837.b #28	ENSGT00950000183184.a.b #29
Mus_A	ANCESTRAL SPECIES		ENSGT00390000003057 #8	ENSGT00940000156776 #9	ENSGT00390000014429.b #10	ENSGT00530000063808.b #11	ENSGT00390000007134 #12	ENSGT00390000011492 #13	ENSGT00390000001775.B #14	ENSGT00390000000950.c.b #15	ENSGT00940000163804 #16	ENSGT00390000015073 #17	ENSGT01020000230354.A.b #18	ENSGT00390000011228.b.b #19	ENSGT00390000007160.a.b #20	ENSGT00940000163231	ENSGT00940000156380 #21	ENSGT00940000156788 #22	ENSGT00940000157779 #23	ENSGT00390000013550 #24	ENSGT00390000015518 #25	ENSGT00940000161184 #26	ENSGT00390000007526 #27	ENSGT00390000017837.b #28	ENSGT00950000183184.a.b #29
Ryukyu mouse	MODERN SPECIES	11	Nudt5 (MGP_CAROLIEiJ_G0023153) #7	Cdc123 (MGP_CAROLIEiJ_G0023152) #8	Camk1d (MGP_CAROLIEiJ_G0023151) #9	Ccdc3 (MGP_CAROLIEiJ_G0023150) #10	Optn (MGP_CAROLIEiJ_G0023149) #11	Mcm10 (MGP_CAROLIEiJ_G0023148) #12	Ucma (MGP_CAROLIEiJ_G0023147) #13	Phyh (MGP_CAROLIEiJ_G0023146) #14	Sephs1 (MGP_CAROLIEiJ_G0023145) #15	Bend7 (MGP_CAROLIEiJ_G0023144) #16	Prpf18 (MGP_CAROLIEiJ_G0023143) #17	Frmd4a (MGP_CAROLIEiJ_G0023142) #18	MGP_CAROLIEiJ_G0023141 #19	Cdnf (MGP_CAROLIEiJ_G0023140) #20	Hspa14 (MGP_CAROLIEiJ_G0023139) #21	Suv39h2 (MGP_CAROLIEiJ_G0023138) #22	Dclre1c (MGP_CAROLIEiJ_G0023137) #23	Meig1 (MGP_CAROLIEiJ_G0023136) #24	Olah (MGP_CAROLIEiJ_G0023135) #25	Acbd7 (MGP_CAROLIEiJ_G0023134) #26	Rpp38 (MGP_CAROLIEiJ_G0023133) #27	Nmt2 (MGP_CAROLIEiJ_G0023132) #28	Fam171a1 (MGP_CAROLIEiJ_G0023131) #29
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000003057 #8	ENSGT00940000156776 #9	ENSGT00390000014429.b #10	ENSGT00530000063808.b #11	ENSGT00390000007134 #12	ENSGT00390000011492 #13	ENSGT00390000001775.B #14	ENSGT00390000000950.c.b #15	ENSGT00940000163804 #16	ENSGT00390000015073 #17	ENSGT01020000230354.A.b #18	ENSGT00390000011228.b.b #19	ENSGT00390000007160.a.b #20	ENSGT00940000163231	ENSGT00940000156380 #21	ENSGT00940000156788 #22	ENSGT00940000157779 #23	ENSGT00390000013550 #24	ENSGT00390000015518 #25	ENSGT00940000161184 #26	ENSGT00390000007526 #27	ENSGT00390000017837.b #28	ENSGT00950000183184.a.b #29
Mus_C	ANCESTRAL SPECIES	30	ENSGT00390000003057 #8	ENSGT00940000156776 #9	ENSGT00390000014429.b #10	ENSGT00530000063808.b #11	ENSGT00390000007134 #12	ENSGT00390000011492 #13	ENSGT00390000001775.B #14	ENSGT00390000000950.c.b #15	ENSGT00940000163804 #16	ENSGT00390000015073 #17	ENSGT01020000230354.A.b #18	ENSGT00390000011228.b.b #19	ENSGT00390000007160.a.b #20	ENSGT00940000163231	ENSGT00940000156380 #21	ENSGT00940000156788 #22	ENSGT00940000157779 #23	ENSGT00390000013550 #24	ENSGT00390000015518 #25	ENSGT00940000161184 #26	ENSGT00390000007526 #27	ENSGT00390000017837.b #28	ENSGT00950000183184.a.b #29
Steppe mouse	MODERN SPECIES	3048	Ccdc3 (ENSMSIG00000011746) #10	Optn (ENSMSIG00000011705) #11	Mcm10 (ENSMSIG00000011666) #12	Ucma (ENSMSIG00000011593) #13	ENSMSIG00000011587	Phyh (ENSMSIG00000011573) #14	Sephs1 (ENSMSIG00000011558) #15	ENSMSIG00000011549	ENSMSIG00000011528	ENSMSIG00000011427 #17	Frmd4a (ENSMSIG00000011066) #18	Fam107b (ENSMSIG00000010928) #19	Cdnf (ENSMSIG00000010908) #20	Gm45902 (ENSMSIG00000010899)	Hspa14 (ENSMSIG00000010832) #21	Suv39h2 (ENSMSIG00000010787) #22	Dclre1c (ENSMSIG00000010516) #23	Meig1 (ENSMSIG00000010502) #24	Olah (ENSMSIG00000010469) #25	ENSMSIG00000010451 #26	Rpp38 (ENSMSIG00000010444) #27	Nmt2 (ENSMSIG00000010317) #28	Fam171a1 (ENSMSIG00000010142) #29	ENSMSIG00000010127
spretus	MODERN SPECIES	11	Nudt5 (MGP_SPRETEiJ_G0024071) #7	Cdc123 (MGP_SPRETEiJ_G0024070) #8	Camk1d (MGP_SPRETEiJ_G0024069) #9	Ccdc3 (MGP_SPRETEiJ_G0024068) #10	Optn (MGP_SPRETEiJ_G0024067) #11	Mcm10 (MGP_SPRETEiJ_G0024066) #12	Ucma (MGP_SPRETEiJ_G0024065) #13	Phyh (MGP_SPRETEiJ_G0024064) #14	Sephs1 (MGP_SPRETEiJ_G0024063) #15	Bend7 (MGP_SPRETEiJ_G0024062) #16	Prpf18 (MGP_SPRETEiJ_G0024061) #17	Frmd4a (MGP_SPRETEiJ_G0024060) #18	MGP_SPRETEiJ_G0024059 #19	Cdnf (MGP_SPRETEiJ_G0024058) #20	Hspa14 (MGP_SPRETEiJ_G0024057) #21	Suv39h2 (MGP_SPRETEiJ_G0024056) #22	Dclre1c (MGP_SPRETEiJ_G0024055) #23	Meig1 (MGP_SPRETEiJ_G0024054) #24	Olah (MGP_SPRETEiJ_G0024053) #25	Acbd7 (MGP_SPRETEiJ_G0024052) #26	Rpp38 (MGP_SPRETEiJ_G0024051) #27	Nmt2 (MGP_SPRETEiJ_G0024050) #28	Fam171a1 (MGP_SPRETEiJ_G0024049) #29
Mouse	MODERN SPECIES	11	Cdc123 (ENSMUSG00000039128) #8	Camk1d (ENSMUSG00000039145) #9	Ccdc3 (ENSMUSG00000026676) #10	Optn (ENSMUSG00000026672) #11	Mcm10 (ENSMUSG00000026669) #12	Ucma (ENSMUSG00000026668) #13	Phyh (ENSMUSG00000026664) #14	Sephs1 (ENSMUSG00000026662) #15	Bend7 (ENSMUSG00000048186) #16	Prpf18 (ENSMUSG00000039449) #17	Frmd4a (ENSMUSG00000026657) #18	Fam107b (ENSMUSG00000026655) #19	Cdnf (ENSMUSG00000039496) #20	Gm45902 (ENSMUSG00000051396)	Hspa14 (ENSMUSG00000109865) #21	Suv39h2 (ENSMUSG00000026646) #22	Dclre1c (ENSMUSG00000026648) #23	Meig1 (ENSMUSG00000026650) #24	Olah (ENSMUSG00000026645) #25	Acbd7 (ENSMUSG00000026644) #26	Rpp38 (ENSMUSG00000049950) #27	Nmt2 (ENSMUSG00000026643) #28	Fam171a1 (ENSMUSG00000050530) #29
Shrew mouse	MODERN SPECIES	7	Nudt5 (MGP_PahariEiJ_G0019213) #7	Cdc123 (MGP_PahariEiJ_G0019212) #8	Camk1d (MGP_PahariEiJ_G0019211) #9	Ccdc3 (MGP_PahariEiJ_G0019210) #10	Optn (MGP_PahariEiJ_G0019209) #11	Mcm10 (MGP_PahariEiJ_G0019208) #12	Ucma (MGP_PahariEiJ_G0019207) #13	Phyh (MGP_PahariEiJ_G0019206) #14	Sephs1 (MGP_PahariEiJ_G0019205) #15	Bend7 (MGP_PahariEiJ_G0019204) #16	Prpf18 (MGP_PahariEiJ_G0019203) #17	Frmd4a (MGP_PahariEiJ_G0019202) #18	MGP_PahariEiJ_G0019201 #19	Cdnf (MGP_PahariEiJ_G0019200) #20	Hspa14 (MGP_PahariEiJ_G0019199) #21	Suv39h2 (MGP_PahariEiJ_G0019198) #22	Dclre1c (MGP_PahariEiJ_G0019197) #23	Meig1 (MGP_PahariEiJ_G0019196) #24	Olah (MGP_PahariEiJ_G0019195) #25	Acbd7 (MGP_PahariEiJ_G0019194) #26	Rpp38 (MGP_PahariEiJ_G0019193) #27	Nmt2 (MGP_PahariEiJ_G0019192) #28	Fam171a1 (MGP_PahariEiJ_G0019191) #29
Rat	MODERN SPECIES	8	ENSRNOG00000066940	Ccdc3 (ENSRNOG00000017933) #10	Optn (ENSRNOG00000017941) #11	Mcm10 (ENSRNOG00000017981) #12	Ucma (ENSRNOG00000017987) #13	Phyh (ENSRNOG00000018044) #14	Sephs1 (ENSRNOG00000018125) #15	Bend7 (ENSRNOG00000022712) #16	Prpf18 (ENSRNOG00000018396) #17	Fbxl14-ps1 (ENSRNOG00000000021)	AABR07028615.1 (ENSRNOG00000018500) #18	Fam107b (ENSRNOG00000014886) #19	Cdnf (ENSRNOG00000026493) #20	LOC102547897 (ENSRNOG00000065772)	Hspa14 (ENSRNOG00000015212) #21	Suv39h2 (ENSRNOG00000015585) #22	Dclre1c (ENSRNOG00000015980) #23	Mt1-ps3 (ENSRNOG00000038047)	Meig1 (ENSRNOG00000016283) #24	Rpl34-ps1 (ENSRNOG00000038045)	Olah (ENSRNOG00000016403) #25	Rpp38 (ENSRNOG00000063181) #27	Nmt2 (ENSRNOG00000026248) #28	Fam171a1 (ENSRNOG00000016534) #29	Itga8 (ENSRNOG00000016538)	Mindy3 (ENSRNOG00000016955)	LOC108348617 (ENSRNOG00000060417)	Pter (ENSRNOG00000017328)	C1ql3 (ENSRNOG00000017459)	Rsu1 (ENSRNOG00000017595)	Cubn (ENSRNOG00000029047)
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000003057 #8	ENSGT00940000156776 #9	ENSGT00390000014429.b #10	ENSGT00530000063808.b #11	ENSGT00390000007134 #12	ENSGT00390000011492 #13	ENSGT00390000001775.B #14	ENSGT00390000000950.c.b #15	ENSGT00940000162606	ENSGT00390000015073 #17	ENSGT01020000230354.A.b #18	ENSGT00390000011228.b.b #19	ENSGT00390000007160.a.b #20	ENSGT00940000163231	ENSGT00940000156380 #21	ENSGT00940000156788 #22	ENSGT00940000157779 #23	ENSGT00390000013550 #24	ENSGT00390000015518 #25	ENSGT00940000161184 #26	ENSGT00390000007526 #27	ENSGT00390000017837.b #28	ENSGT00950000183184.a.b #29	ENSGT00940000156737	ENSGT00940000155958	ENSGT00390000006960	ENSGT00940000161639	ENSGT00940000158676	ENSGT00940000155299.A	ENSGT00390000016416	ENSGT00940000156146
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000003057 #8	ENSGT00940000156776 #9	ENSGT00390000014429.b #10	ENSGT00530000063808.b #11	ENSGT00390000007134 #12	ENSGT00390000011492 #13	ENSGT00390000001775.B #14	ENSGT00390000000950.c.b #15	ENSGT00940000162606	ENSGT00390000015073 #17	ENSGT01020000230354.A.b #18	ENSGT00390000011228.b.b #19	ENSGT00390000007160.a.b #20	ENSGT00940000163231	ENSGT00940000156380 #21	ENSGT00940000156788 #22	ENSGT00940000157779 #23	ENSGT00390000013550 #24	ENSGT00390000015518 #25	ENSGT00940000161184 #26	ENSGT00390000007526 #27	ENSGT00390000017837.b #28	ENSGT00950000183184.a.b #29	ENSGT00940000156737	ENSGT00940000155958	ENSGT00390000006960	ENSGT00940000161639	ENSGT00940000158676	ENSGT00940000155299.A	ENSGT00390000016416	ENSGT00940000156146
Northern American deer mouse	MODERN SPECIES	18	Ccdc3 (ENSPEMG00000010385) #10	Optn (ENSPEMG00000000071) #11	Mcm10 (ENSPEMG00000008646) #12	Ucma (ENSPEMG00000010656) #13	Phyh (ENSPEMG00000013360) #14	Sephs1 (ENSPEMG00000014445) #15	ENSPEMG00000007132	ENSPEMG00000002513	Prpf18 (ENSPEMG00000013704) #17	ENSPEMG00000029697	Frmd4a (ENSPEMG00000008028) #18	Fam107b (ENSPEMG00000029727) #19	Cdnf (ENSPEMG00000007242) #20	Gm45902 (ENSPEMG00000031111)	Hspa14 (ENSPEMG00000010294) #21	Suv39h2 (ENSPEMG00000017334) #22	Dclre1c (ENSPEMG00000010642) #23	Meig1 (ENSPEMG00000027268) #24	ENSPEMG00000026010	Olah (ENSPEMG00000015490) #25	Acbd7 (ENSPEMG00000015811) #26	Rpp38 (ENSPEMG00000008375) #27	Nmt2 (ENSPEMG00000014922) #28	Fam171a1 (ENSPEMG00000011973) #29	Itga8 (ENSPEMG00000015642)	Mindy3 (ENSPEMG00000012561)	Pter (ENSPEMG00000008590)	C1ql3 (ENSPEMG00000024317)	Rsu1 (ENSPEMG00000015677)	Cubn (ENSPEMG00000012926)	Trdmt1 (ENSPEMG00000018297)
Prairie vole	MODERN SPECIES	3	Cdc123 (ENSMOCG00000010761) #8	Camk1d (ENSMOCG00000002558) #9	Ccdc3 (ENSMOCG00000021095) #10	Optn (ENSMOCG00000016560) #11	Mcm10 (ENSMOCG00000022180) #12	Ucma (ENSMOCG00000005346) #13	Phyh (ENSMOCG00000001877) #14	Sephs1 (ENSMOCG00000022876) #15	ENSMOCG00000022807	Prpf18 (ENSMOCG00000021468) #17	Frmd4a (ENSMOCG00000018621) #18	ENSMOCG00000018519 #19	Cdnf (ENSMOCG00000016251) #20	Gm45902 (ENSMOCG00000002410)	Hspa14 (ENSMOCG00000020460) #21	Suv39h2 (ENSMOCG00000011550) #22	Dclre1c (ENSMOCG00000006406) #23	Meig1 (ENSMOCG00000009538) #24	ENSMOCG00000013927	Mpp7 (ENSMOCG00000009850)	ENSMOCG00000019180	Odad2 (ENSMOCG00000011155)	Mkx (ENSMOCG00000015948)	Rab18 (ENSMOCG00000013044)	ENSMOCG00000022076	ENSMOCG00000012449	Epc1 (ENSMOCG00000000443)	ENSMOCG00000005535	Kif5b (ENSMOCG00000019118)	ENSMOCG00000018138	Arhgap12 (ENSMOCG00000009460)
Cricetinae	ANCESTRAL SPECIES	26	ENSGT00390000003057 #8	ENSGT00940000156776 #9	ENSGT00390000014429.b #10	ENSGT00530000063808.b #11	ENSGT00390000007134 #12	ENSGT00390000011492 #13	ENSGT00390000001775.B #14	ENSGT00390000000950.c.b #15	ENSGT00940000162606	ENSGT00390000015073 #17	ENSGT01020000230354.A.b #18	ENSGT00390000011228.b.b #19	ENSGT00390000007160.a.b #20	ENSGT00940000163231	ENSGT00940000156380 #21	ENSGT00940000156788 #22	ENSGT00940000157779 #23	ENSGT00390000013550 #24	ENSGT00390000015518 #25	ENSGT00940000161184 #26	ENSGT00390000007526 #27	ENSGT00390000017837.b #28	ENSGT00950000183184.a.b #29	ENSGT00940000156737	ENSGT00940000155958	ENSGT00390000006960	ENSGT00940000161639	ENSGT00940000158676	ENSGT00940000155299.A	ENSGT00390000016416	ENSGT00940000156146
Chinese hamster chok1gshd	MODERN SPECIES	317	Camk1d (ENSCGRG00001005420) #9	Ccdc3 (ENSCGRG00001021619) #10	Optn (ENSCGRG00001014359) #11	Mcm10 (ENSCGRG00001011187) #12	Ucma (ENSCGRG00001014571) #13	Phyh (ENSCGRG00001022685) #14	Sephs1 (ENSCGRG00001013040) #15	ENSCGRG00001015360	Prpf18 (ENSCGRG00001023665) #17	ENSCGRG00001020329	Frmd4a (ENSCGRG00001021993) #18	ENSCGRG00001016519 #19	Cdnf (ENSCGRG00001012781) #20	Gm45902 (ENSCGRG00001007819)	Hspa14 (ENSCGRG00001009113) #21	Suv39h2 (ENSCGRG00001015429) #22	Dclre1c (ENSCGRG00001021478) #23	Meig1 (ENSCGRG00001009415) #24	Olah (ENSCGRG00001021877) #25	Acbd7 (ENSCGRG00001000337) #26	Rpp38 (ENSCGRG00001001395) #27	Nmt2 (ENSCGRG00001014438) #28	Fam171a1 (ENSCGRG00001015846) #29	ENSCGRG00001022446	Itga8 (ENSCGRG00001021942)	Mindy3 (ENSCGRG00001008270)	Pter (ENSCGRG00001013707)	C1ql3 (ENSCGRG00001002028)	ENSCGRG00001023344	Rsu1 (ENSCGRG00001000898)	Cubn (ENSCGRG00001019615)
Golden Hamster	MODERN SPECIES	728	Echdc3 (ENSMAUG00000010548)	Proser2 (ENSMAUG00000013393)	Upf2 (ENSMAUG00000016512)	Dhtkd1 (ENSMAUG00000019348)	Nudt5 (ENSMAUG00000020126) #7	Cdc123 (ENSMAUG00000019286) #8	Camk1d (ENSMAUG00000003534) #9	Ccdc3 (ENSMAUG00000002142) #10	Optn (ENSMAUG00000017518) #11	Phyh (ENSMAUG00000021652) #14	Sephs1 (ENSMAUG00000020309) #15	ENSMAUG00000000534	Frmd4a (ENSMAUG00000018829) #18	ENSMAUG00000002214 #19	Cdnf (ENSMAUG00000016629) #20	Suv39h2 (ENSMAUG00000007087) #22	Dclre1c (ENSMAUG00000021563) #23	Olah (ENSMAUG00000020873) #25	Acbd7 (ENSMAUG00000005954) #26	Rpp38 (ENSMAUG00000003644) #27	Nmt2 (ENSMAUG00000021877) #28	Fam171a1 (ENSMAUG00000008247) #29	Itga8 (ENSMAUG00000016581)	Mindy3 (ENSMAUG00000021174)	Pter (ENSMAUG00000022178)	C1ql3 (ENSMAUG00000007710)	Rsu1 (ENSMAUG00000014980)	Cubn (ENSMAUG00000015453)	Trdmt1 (ENSMAUG00000013279)	Vim (ENSMAUG00000004577)	St8sia6 (ENSMAUG00000008670)